Cottonwood - A Promising Tree for Intensive Management

Treesearch

Henry Bull

1945-01-01

Eastern cottonwood is by far the most important of ten closely related native species of cottonwood-most of which have numerous varieties and apparently hybridize frequently. It is one of our fastest-growing native trees and the wood is widely used in many different product8. Because of exceptionally fast growth and relatively high value. eastern cottonwood is a very...

Hybrid Poplar Plantations Outgrow Deer Browsing Effects

Treesearch

Daniel A. Netzer

1984-01-01

Good plantation establishment techniques along with fast growing clones result in minimal deer damage to hybrid poplar plantations. Although deer prefer certain clones, as food becomes scarce they eventually browse all clones. With proper establishment trees grow to or beyond the reach of browsing deer in the first year and well beyond in the second. Poorly...

Seasonality on the rainfall partitioning of a fast-growing tree plantation under Mediterranean conditions

NASA Astrophysics Data System (ADS)

molina, antonio; llorens, pilar; biel, carme

2014-05-01

Studies on rainfall interception in fast-growing tree plantations are less numerous than those in natural forests. Trees in these plantations are regularly distributed, and the canopy cover is clumped but changes quickly, resulting on high variability in the volume and composition of water that reach the soil. In addition, irrigation supply is normally required in semiarid areas to get optimal wood production; consequently, knowing rainfall interception and its yearly evolution is crucial to manage the irrigation scheme properly. This work studies the rainfall partitioning seasonality in a cherry tree (Prunus avium) plantation orientated to timber production under Mediterranean conditions. The monitoring design started on March 2012 and consists of a set of 58 throughfall tipping buckets randomly distributed (based on a 1x1 m2 grid) in a plot of 128 m2 with 8 trees. Stemflow is measured in all the trees with 2 tipping buckets and 6 accumulative collectors. Canopy cover is regularly measured throughout the study period, in leaf and leafless periods, by mean of sky-orientated photographs taken 50 cm above the center of each tipping bucket. Others tree biometrics are also measured such as diameter and leaf area index. Meteorological conditions are measured at 2 m above the forest cover. This work presents the first analyses describing the rainfall partitioning and its dependency on canopy cover, distance to tree and meteorological conditions. The modified Gash' model for rainfall interception in dispersed vegetation is also preliminary evaluated.

Dendroclimatic potential of plains cottonwood (Populus deltoides subsp. monilifera) from the Northern Great Plains, USA

USGS Publications Warehouse

Edmonson, Jesse; Friedman, Jonathan; Meko, David; Touchan, Ramzi; Scott, Julian; Edmonson, Alan

2014-01-01

A new 368-year tree-ring chronology (A.D. 1643–2010) has been developed in western North Dakota using plains cottonwood (Populus deltoides subsp. monilifera) growing on the relatively undisturbed floodplain of the Little Missouri River in the North Unit of Theodore Roosevelt National Park. We document many slow-growing living trees between 150–370 years old that contradict the common understanding that cottonwoods grow fast and die young. In this northern location, cottonwood produces distinct annual rings with dramatic interannual variability that strongly crossdate. The detrended tree-ring chronology is significantly positively correlated with local growing season precipitation and soil moisture conditions (r  =  0.69). This time series shows periods of prolonged low radial tree growth during the known droughts of the instrumental record (e.g. 1931–1939 and 1980–1981) and also during prehistory (e.g. 1816–1823 and 1856–1865) when other paleoclimate studies have documented droughts in this region. Tree rings of cottonwood will be a useful tool to help reconstruct climate, streamflow, and the floodplain history of the Little Missouri River and other northern river systems.

The rise of the mediocre forest: why chronically stressed trees may better survive extreme episodic climate variability

Treesearch

Steven G. McNulty; Johnny L. Boggs; Ge Sun

2014-01-01

Anthropogenic climate change is a relatively new phenomenon, largely occurring over the past 150 years, and much of the discussion on climate change impacts to forests has focused on long-term shifts in temperature and precipitation. However, individual trees respond to the much shorter impacts of climate variability. Historically, fast growing, fully canopied, non-...

Merchantable Volume and Weights of Mahoe in Puerto Rican Plantations

Treesearch

John K. Francis

1989-01-01

Mahoe (Hibiscus elatus Sw.), a fast-growing tree whose wood is considered valuable, is planted and managed primarily in the West Indies. Until now, volume and weight tables have not been available for the species. Data used in this paper were collected from 50 felled trees in a range of sizes from plantations across Puerto Rico. Using linear...

Diseases in Southeastern Forest Nurseries and Their Control

Treesearch

Charles S. Hodges

1962-01-01

The large increase in planting forest trees in the United States during the last 10 years has resulted in a tremendous increase in the demand for planting stock. This demand has been exceptionally heavy in the South, where favorable growing conditions and the use of fast-growing species have made forest farming a profitable business. Seedling production in southern...

How fast to northern hardwoods grow?

Treesearch

Rapheal Zon; H.F. Scholz

1929-01-01

The knowledge of the rate at which trees grow in virgin forests, after clear cutting and under selective logging, is indispensable in any forest calculations or forest practice. The enactment of the Forest Crop Law, which brought under its operation about 175,000 acres of cut-over land during the first year, the example set by several progressive lumbermen in selective...

Fishing, fast growth and climate variability increase the risk of collapse

PubMed Central

Pinsky, Malin L.; Byler, David

2015-01-01

Species around the world have suffered collapses, and a key question is why some populations are more vulnerable than others. Traditional conservation biology and evidence from terrestrial species suggest that slow-growing populations are most at risk, but interactions between climate variability and harvest dynamics may alter or even reverse this pattern. Here, we test this hypothesis globally. We use boosted regression trees to analyse the influences of harvesting, species traits and climate variability on the risk of collapse (decline below a fixed threshold) across 154 marine fish populations around the world. The most important factor explaining collapses was the magnitude of overfishing, while the duration of overfishing best explained long-term depletion. However, fast growth was the next most important risk factor. Fast-growing populations and those in variable environments were especially sensitive to overfishing, and the risk of collapse was more than tripled for fast-growing when compared with slow-growing species that experienced overfishing. We found little evidence that, in the absence of overfishing, climate variability or fast growth rates alone drove population collapse over the last six decades. Expanding efforts to rapidly adjust harvest pressure to account for climate-driven lows in productivity could help to avoid future collapses, particularly among fast-growing species. PMID:26246548

Fishing, fast growth and climate variability increase the risk of collapse.

PubMed

Pinsky, Malin L; Byler, David

2015-08-22

Species around the world have suffered collapses, and a key question is why some populations are more vulnerable than others. Traditional conservation biology and evidence from terrestrial species suggest that slow-growing populations are most at risk, but interactions between climate variability and harvest dynamics may alter or even reverse this pattern. Here, we test this hypothesis globally. We use boosted regression trees to analyse the influences of harvesting, species traits and climate variability on the risk of collapse (decline below a fixed threshold) across 154 marine fish populations around the world. The most important factor explaining collapses was the magnitude of overfishing, while the duration of overfishing best explained long-term depletion. However, fast growth was the next most important risk factor. Fast-growing populations and those in variable environments were especially sensitive to overfishing, and the risk of collapse was more than tripled for fast-growing when compared with slow-growing species that experienced overfishing. We found little evidence that, in the absence of overfishing, climate variability or fast growth rates alone drove population collapse over the last six decades. Expanding efforts to rapidly adjust harvest pressure to account for climate-driven lows in productivity could help to avoid future collapses, particularly among fast-growing species. © 2015 The Author(s).

Analyzing Air Pollutant Emissions from the Biofuel Supply Chain | Energy

Science.gov Websites

biomass-to-biofuels life cycle - fast-growing trees, agricultural waste, storage silos, and a biorefinery published in Chapter 9-"Implications of Air Pollutant Emissions from Producing Agricultural and

Reversing a tree regeneration crisis in an endangered ecoregion.

PubMed

Fischer, Joern; Stott, Jenny; Zerger, Andre; Warren, Garth; Sherren, Kate; Forrester, Robert I

2009-06-23

Global food demand is growing rapidly. Livestock grazing can provide a valuable source of protein, but conventional grazing is often unsustainable. We studied an 800,000-ha section of a threatened ecoregion in southeastern Australia. Conventional management in the region involves continuous livestock grazing with few rest periods and regular fertilizer application. By using remotely sensed data on tree cover and extensive field data on livestock grazing regimes, soil chemistry, tree diameters, and tree regeneration, we show that the region is facing a tree regeneration crisis. Under conventional management, across the region, millions of hectares of land currently supporting tens of millions of trees will be treeless within decades from now. This would have severe negative ramifications for biodiversity and key ecosystem services, including water infiltration and shade provision for livestock. However, we identified an unexpected win-win solution for tree regeneration and commercial grazing. A relatively new practice in the region is fast-rotational grazing, characterized by prolonged rest periods in between short, intensive grazing events. The probability of regeneration under fast-rotational grazing was up to 4-fold higher than under conventional grazing, and it did not differ significantly from the probability of regeneration in ungrazed areas. In addition, trees were more likely to regenerate where soil nutrient levels were low. These findings suggest that the tree regeneration crisis can be reversed by applying low-input, fast-rotational grazing. New policy settings supporting these practices could signal a turning point for the region, from ecological decline to ecological recovery.

Reversing a tree regeneration crisis in an endangered ecoregion

PubMed Central

Fischer, Joern; Stott, Jenny; Zerger, Andre; Warren, Garth; Sherren, Kate; Forrester, Robert I.

2009-01-01

Global food demand is growing rapidly. Livestock grazing can provide a valuable source of protein, but conventional grazing is often unsustainable. We studied an 800,000-ha section of a threatened ecoregion in southeastern Australia. Conventional management in the region involves continuous livestock grazing with few rest periods and regular fertilizer application. By using remotely sensed data on tree cover and extensive field data on livestock grazing regimes, soil chemistry, tree diameters, and tree regeneration, we show that the region is facing a tree regeneration crisis. Under conventional management, across the region, millions of hectares of land currently supporting tens of millions of trees will be treeless within decades from now. This would have severe negative ramifications for biodiversity and key ecosystem services, including water infiltration and shade provision for livestock. However, we identified an unexpected win–win solution for tree regeneration and commercial grazing. A relatively new practice in the region is fast-rotational grazing, characterized by prolonged rest periods in between short, intensive grazing events. The probability of regeneration under fast-rotational grazing was up to 4-fold higher than under conventional grazing, and it did not differ significantly from the probability of regeneration in ungrazed areas. In addition, trees were more likely to regenerate where soil nutrient levels were low. These findings suggest that the tree regeneration crisis can be reversed by applying low-input, fast-rotational grazing. New policy settings supporting these practices could signal a turning point for the region, from ecological decline to ecological recovery. PMID:19497886

Bottomland hardwood reforestation for neotropical migratory birds: are we missing the forest for the trees?

USGS Publications Warehouse

Twedt, D.J.; Portwood, J.

1997-01-01

Reforestation of bottomland hardwoods on lands managed for wildlife or timber production has historically emphasized planting heavy-seeded oaks (Quercus spp.). Although techniques have been developed for successful oak establishment, these plantings often require 5 or more years before establishing a 3-dimensional forest structure. We suggest that lands planted to fast-growing early-successional species, in combination with oaks, provide: (1) more expedient benefits to Neotropical migratory birds; (2) greater forest diversity; (3) more rapid economic return to landowners; and (4) enhanced public relations. Under good growing conditions, and with effective weed control, some fast-growing species can develop a substantial 3-dimensional forest structure in as few as 2 or 3 years. Forest-breeding Neotropical migratory birds use stands planted with early successional species several years before sites planted solely with oaks. Where desirable, succession to forests with a high proportion of oak species can be achieved on sites initially planted with fast-growing species through silvicultural management.

Assessing evidence for a pervasive alteration in tropical tree communities.

PubMed

Chave, Jérôme; Condit, Richard; Muller-Landau, Helene C; Thomas, Sean C; Ashton, Peter S; Bunyavejchewin, Sarayudh; Co, Leonardo L; Dattaraja, Handanakere S; Davies, Stuart J; Esufali, Shameema; Ewango, Corneille E N; Feeley, Kenneth J; Foster, Robin B; Gunatilleke, Nimal; Gunatilleke, Savitri; Hall, Pamela; Hart, Terese B; Hernández, Consuelo; Hubbell, Stephen P; Itoh, Akira; Kiratiprayoon, Somboon; Lafrankie, James V; Loo de Lao, Suzanne; Makana, Jean-Rémy; Noor, Md Nur Supardi; Kassim, Abdul Rahman; Samper, Cristián; Sukumar, Raman; Suresh, Hebbalalu S; Tan, Sylvester; Thompson, Jill; Tongco, Ma Dolores C; Valencia, Renato; Vallejo, Martha; Villa, Gorky; Yamakura, Takuo; Zimmerman, Jess K; Losos, Elizabeth C

2008-03-04

In Amazonian tropical forests, recent studies have reported increases in aboveground biomass and in primary productivity, as well as shifts in plant species composition favouring fast-growing species over slow-growing ones. This pervasive alteration of mature tropical forests was attributed to global environmental change, such as an increase in atmospheric CO2 concentration, nutrient deposition, temperature, drought frequency, and/or irradiance. We used standardized, repeated measurements of over 2 million trees in ten large (16-52 ha each) forest plots on three continents to evaluate the generality of these findings across tropical forests. Aboveground biomass increased at seven of our ten plots, significantly so at four plots, and showed a large decrease at a single plot. Carbon accumulation pooled across sites was significant (+0.24 MgC ha(-1) y(-1), 95% confidence intervals [0.07, 0.39] MgC ha(-1) y(-1)), but lower than reported previously for Amazonia. At three sites for which we had data for multiple census intervals, we found no concerted increase in biomass gain, in conflict with the increased productivity hypothesis. Over all ten plots, the fastest-growing quartile of species gained biomass (+0.33 [0.09, 0.55] % y(-1)) compared with the tree community as a whole (+0.15 % y(-1)); however, this significant trend was due to a single plot. Biomass of slow-growing species increased significantly when calculated over all plots (+0.21 [0.02, 0.37] % y(-1)), and in half of our plots when calculated individually. Our results do not support the hypothesis that fast-growing species are consistently increasing in dominance in tropical tree communities. Instead, they suggest that our plots may be simultaneously recovering from past disturbances and affected by changes in resource availability. More long-term studies are necessary to clarify the contribution of global change to the functioning of tropical forests.

Australian Pine, Casuarina equisetifolia L. Management Plan for Florida

USDA-ARS?s Scientific Manuscript database

Australian pine (Casuarina equisetifolia) is a fast growing tree native to Australia, Southeast Asia, India, Bangladesh and the Pacific Islands that has been introduced to tropical areas throughout the world as an ornamental; to stabilize sand dunes; to form windbreaks around canals, roads, houses, ...

Processed eucalyptus trees as a substrate component for greenhouse crop production

USDA-ARS?s Scientific Manuscript database

Fast growing eucalyptus species are selected for commercial plantings worldwide and are harvested for a variety of uses. Eucalyptus plantings in south Florida are harvested for landscape mulch production, yet this material may have potential as a container substrate for horticulture crop production....

Properties and utilization of poplar wood

Treesearch

John J. Balatinecz; David E. Kretschmann

2001-01-01

Hybrid poplars are fast-growing, moisture-loving, full-sun-loving large trees that can be a rapid source of wood fiber. With the introduction of waferboard, oriented strandboard (OSB), and laminated strand lumber (LSL), aspen utilization has dramatically increased. Indigenous and hybrid poplars, however, present their own challenges, such as high discoloration...

Early root growth and architecture of fast- and slow-growing Norway spruce (Picea abies) families differ-potential for functional adaptation.

PubMed

Hamberg, Leena; Velmala, Sannakajsa M; Sievänen, Risto; Kalliokoski, Tuomo; Pennanen, Taina

2018-06-01

The relationship between the growth rate of aboveground parts of trees and fine root development is largely unknown. We investigated the early root development of fast- and slow-growing Norway spruce (Picea abies (L.) H. Karst.) families at a developmental stage when the difference in size is not yet observed. Seedling root architecture data, describing root branching, were collected with the WinRHIZO™ image analysis system, and mixed models were used to determine possible differences between the two growth phenotypes. A new approach was used to investigate the spatial extent of root properties along the whole sample root from the base of 1-year-old seedlings to the most distal part of a root. The root architecture of seedlings representing fast-growing phenotypes showed ~30% higher numbers of root branches and tips, which resulted in larger root extensions and potentially a better ability to acquire nutrients. Seedlings of fast-growing phenotypes oriented and allocated root tips and biomass further away from the base of the seedling than those growing slowly, a possible advantage in nutrient-limited and heterogeneous boreal forest soils. We conclude that a higher long-term growth rate of the aboveground parts in Norway spruce may relate to greater allocation of resources to explorative roots that confers a competitive edge during early growth phases in forest ecosystems.

Flavonoid supplementation affects the expression of genes involved in cell wall formation and lignification metabolism and increases sugar content and saccharification in the fast-growing eucalyptus hybrid E. urophylla x E. grandis.

PubMed

Lepikson-Neto, Jorge; Nascimento, Leandro C; Salazar, Marcela M; Camargo, Eduardo L O; Cairo, João P F; Teixeira, Paulo J; Marques, Wesley L; Squina, Fabio M; Mieczkowski, Piotr; Deckmann, Ana C; Pereira, Gonçalo A G

2014-11-19

Eucalyptus species are the most widely planted hardwood species in the world and are renowned for their rapid growth and adaptability. In Brazil, one of the most widely grown Eucalyptus cultivars is the fast-growing Eucalyptus urophylla x Eucalyptus grandis hybrid. In a previous study, we described a chemical characterization of these hybrids when subjected to flavonoid supplementation on 2 distinct timetables, and our results revealed marked differences between the wood composition of the treated and untreated trees. In this work, we report the transcriptional responses occurring in these trees that may be related to the observed chemical differences. Gene expression was analysed through mRNA-sequencing, and notably, compared to control trees, the treated trees display differential down-regulation of cell wall formation pathways such as phenylpropanoid metabolism as well as differential expression of genes involved in sucrose, starch and minor CHO metabolism and genes that play a role in several stress and environmental responses. We also performed enzymatic hydrolysis of wood samples from the different treatments, and the results indicated higher sugar contents and glucose yields in the flavonoid-treated plants. Our results further illustrate the potential use of flavonoids as a nutritional complement for modifying Eucalyptus wood, since, supplementation with flavonoids alters its chemical composition, gene expression and increases saccharification probably as part of a stress response.

Age class, longevity and growth rate relationships: protracted growth increases in old trees in the eastern United States.

PubMed

Johnson, Sarah E; Abrams, Marc D

2009-11-01

This study uses data from the International Tree-Ring Data Bank website and tree cores collected in the field to explore growth rate (basal area increment, BAI) relationships across age classes (from young to old) for eight tree species in the eastern US. These species represent a variety of ecological traits and include those in the genera Populus, Quercus, Pinus, Tsuga and Nyssa. We found that most trees in all age classes and species exhibit an increasing BAI throughout their lives. This is particularly unusual for trees in the older age classes that we expected to have declining growth in the later years, as predicted by physiological growth models. There exists an inverse relationship between growth rate and increasing age class. The oldest trees within each species have consistently slow growth throughout their lives, implying an inverse relationship between growth rate and longevity. Younger trees (< 60 years of age) within each species are consistently growing faster than the older trees when they are of the same age resulting from a higher proportion of fast-growing trees in these young age classes. Slow, but increasing, BAI in the oldest trees in recent decades is a continuation of their growth pattern established in previous centuries. The fact that they have not shown a decreasing growth rate in their old age contradicts physiological growth models and may be related to the stimulatory effects of global change phenomenon (climate and land-use history).

Is long primary growth associated with stem sinuosity in Douglas-fir?

Treesearch

Barbara L. Gartner; G.R. Johnson

2006-01-01

Stem sinuosity is a highly visible stem-form trait in the leaders of fast-growing Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) trees, yet its cause is unknown. We tested the hypotheses that sinuous stems have longer expanses of primary growth than nonsinuous stems (putting the leader at higher risk for...

Inga paterno Harms

Treesearch

Nadia Navarrete-Tindall; Hugo Aragon

2002-01-01

Inga paterno is native to southern Mexico and Central America (Zarucchi 1986). Inga paterno is a fast-growing tree, reaching 10 m to 20 m in height and 44 cm d.b.h. Inga paterno has pinnately compound leaves with four to five elongated and entire leaflets (Guzmin 1980). Leaves are copper-red and soft when young,...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Morton, J.F.

A description is given of Acacia auriculiformis, together with a warning against its use for ornamental landscaping in Florida (a hurricane area). The tree grows very fast, reaching 30-55 ft in 8 years, lacks wind resistance, produces much persistent litter, seeds itself freely and is now a common weed species in Florida. The wood is of value for handicrafts. 3 references.

Evaluation of short-rotation woody crops to stabilize a decommissioned swine lagoon

Treesearch

K.C. Dipesh; Rodney E. Will; Thomas C. Hennessey; Chad J. Penn

2012-01-01

Fast growing tree stands represent an environmentally friendly, less expensive method for stabilization of decommissioned animal production lagoons than traditional lagoon closure. We tested the feasibility of using short-rotation woody crops (SRWCs) in central Oklahoma to close a decommissioned swine lagoon by evaluating the growth performance and nutrient uptake of...

Evaluation of efficient glucose release using sodium hydroxide and phosphoric acid as pretreating agents from the biomass of Sesbania grandiflora (L.) Pers.: A fast growing tree legume.

PubMed

Mund, Nitesh K; Dash, Debabrata; Barik, Chitta R; Goud, Vaibhav V; Sahoo, Lingaraj; Mishra, Prasannajit; Nayak, Nihar R

2017-07-01

Sesbania grandiflora (L.) Pers. is one of the fast growing tree legumes having the efficiency to produce around 50tha -1 above ground dry matters in a year. In this study, biomass of 2years old S. grandiflora was selected for the chemical composition, pretreatments and enzymatic hydrolysis studies. The stem biomass with a wood density of 3.89±0.01gmcm -3 contains about 38% cellulose, 12% hemicellulose and 28% lignin. Enzymatic hydrolysis of pretreated biomass revealed that phosphoric acid (H 3 PO 4 ) pretreated samples even at lower cellulase loadings [1 Filter Paper Units (FPU)], could efficiently convert about 86% glucose, while, even at higher cellulase loadings (60FPU) alkali pretreated biomass could convert only about 58% glucose. The effectiveness of phosphoric acid pretreatment was also supported by X-ray diffraction (XRD), field emission scanning electron microscopy (FE-SEM) and Fourier transform infrared spectroscopy (FTIR) analysis. Copyright © 2017 Elsevier Ltd. All rights reserved.

Insect outbreak shifts the direction of selection from fast to slow growth rates in the long-lived conifer Pinus ponderosa.

PubMed

de la Mata, Raul; Hood, Sharon; Sala, Anna

2017-07-11

Long generation times limit species' rapid evolution to changing environments. Trees provide critical global ecosystem services, but are under increasing risk of mortality because of climate change-mediated disturbances, such as insect outbreaks. The extent to which disturbance changes the dynamics and strength of selection is unknown, but has important implications on the evolutionary potential of tree populations. Using a 40-y-old Pinus ponderosa genetic experiment, we provide rare evidence of context-dependent fluctuating selection on growth rates over time in a long-lived species. Fast growth was selected at juvenile stages, whereas slow growth was selected at mature stages under strong herbivory caused by a mountain pine beetle ( Dendroctonus ponderosae ) outbreak. Such opposing forces led to no net evolutionary response over time, thus providing a mechanism for the maintenance of genetic diversity on growth rates. Greater survival to mountain pine beetle attack in slow-growing families reflected, in part, a host-based life-history trade-off. Contrary to expectations, genetic effects on tree survival were greatest at the peak of the outbreak and pointed to complex defense responses. Our results suggest that selection forces in tree populations may be more relevant than previously thought, and have implications for tree population responses to future environments and for tree breeding programs.

Birth-death models and coalescent point processes: the shape and probability of reconstructed phylogenies.

PubMed

Lambert, Amaury; Stadler, Tanja

2013-12-01

Forward-in-time models of diversification (i.e., speciation and extinction) produce phylogenetic trees that grow "vertically" as time goes by. Pruning the extinct lineages out of such trees leads to natural models for reconstructed trees (i.e., phylogenies of extant species). Alternatively, reconstructed trees can be modelled by coalescent point processes (CPPs), where trees grow "horizontally" by the sequential addition of vertical edges. Each new edge starts at some random speciation time and ends at the present time; speciation times are drawn from the same distribution independently. CPPs lead to extremely fast computation of tree likelihoods and simulation of reconstructed trees. Their topology always follows the uniform distribution on ranked tree shapes (URT). We characterize which forward-in-time models lead to URT reconstructed trees and among these, which lead to CPP reconstructed trees. We show that for any "asymmetric" diversification model in which speciation rates only depend on time and extinction rates only depend on time and on a non-heritable trait (e.g., age), the reconstructed tree is CPP, even if extant species are incompletely sampled. If rates additionally depend on the number of species, the reconstructed tree is (only) URT (but not CPP). We characterize the common distribution of speciation times in the CPP description, and discuss incomplete species sampling as well as three special model cases in detail: (1) the extinction rate does not depend on a trait; (2) rates do not depend on time; (3) mass extinctions may happen additionally at certain points in the past. Copyright © 2013 Elsevier Inc. All rights reserved.

Automated Reconstruction of Neural Trees Using Front Re-initialization

PubMed Central

Mukherjee, Amit; Stepanyants, Armen

2013-01-01

This paper proposes a greedy algorithm for automated reconstruction of neural arbors from light microscopy stacks of images. The algorithm is based on the minimum cost path method. While the minimum cost path, obtained using the Fast Marching Method, results in a trace with the least cumulative cost between the start and the end points, it is not sufficient for the reconstruction of neural trees. This is because sections of the minimum cost path can erroneously travel through the image background with undetectable detriment to the cumulative cost. To circumvent this problem we propose an algorithm that grows a neural tree from a specified root by iteratively re-initializing the Fast Marching fronts. The speed image used in the Fast Marching Method is generated by computing the average outward flux of the gradient vector flow field. Each iteration of the algorithm produces a candidate extension by allowing the front to travel a specified distance and then tracking from the farthest point of the front back to the tree. Robust likelihood ratio test is used to evaluate the quality of the candidate extension by comparing voxel intensities along the extension to those in the foreground and the background. The qualified extensions are appended to the current tree, the front is re-initialized, and Fast Marching is continued until the stopping criterion is met. To evaluate the performance of the algorithm we reconstructed 6 stacks of two-photon microscopy images and compared the results to the ground truth reconstructions by using the DIADEM metric. The average comparison score was 0.82 out of 1.0, which is on par with the performance achieved by expert manual tracers. PMID:24386539

Changes in carbon pool and stand structure of a native subtropical mangrove forest after inter-planting with exotic species Sonneratia apetala.

PubMed

Lu, Weizhi; Yang, Shengchang; Chen, Luzhen; Wang, Wenqing; Du, Xiaona; Wang, Canmou; Ma, Yan; Lin, Guangxuan; Lin, Guanghui

2014-01-01

In this study, we compared stand structure, biomass and soil carbon pools, and litterfall production between a mixed mangrove forest consisting of Aegiceras corniculatum inter-planted with the exotic Sonneratia apetala and a native monospecific forest dominated by A. corniculatum in the intertidal area of Zhanjiang, Guangdong Province, southeast China. The goal of this study was to test the hypothesis that inter-planting fast growing exotic mangrove S. apetala into subtropical native mangrove forests will significantly increase C sequestration. Although the tree heights and basal diameters of S. apetala were significantly higher than those of A. corniculatum, the density of the 12-year-old S. apetala trees in the mixed forest was much smaller than that of A. corniculatum in the monospecific forest. In contrast to several previous studies on S. apetala forests planted directly on mangrove-free mudflats, the mixed mangrove forest showed no significant difference in either standing biomass or soil carbon pools from the native monospecific mangrove forest (p = 0.294 and 0.073, respectively) twelve years after inter-planting with S. apetala. Moreover, carbon cycling was likely speeded up after inter-planting S. apetala due to higher litterfall input and lower C/N ratio. Thus, inter-planting fast-growing S. apetala into native mangrove forest is not an effective way to increase carbon sequestration in this subtropical mangrove forest. Given that exotic plant species may exert negative impact on native mangrove species and related epifauna, this fast-growing mangrove species is not suitable for mangrove plantation projects aiming mainly at enhancing carbon sequestration.

Survey to evaluate escape of Eucalyptus spp. seedlings from plantations in southeastern USA

Treesearch

Mac A. Callaham; John A. Stanturf; William J. Hammond; Donald L. Rockwood; Evelyn S. Wenk; Joseph J. O’Brien

2013-01-01

Interest in biomass-based energy in the southeastern Unites States has led to increased need for fast-growing tree species. Several Eucalyptus species exhibit characteristics that make them attractive in the bioenergy context. However, some of these also possess traits that suggest they could become invasive. To make a preliminary assessment of the...

Impacts of Falcataria moluccana invasion on decomposition in Hawaiian lowland wet forests: The importance of stand-level controls

Treesearch

R. Flint Hughes; Amanda Uowolo

2006-01-01

Invasive species have the capacity to substantially alter soil processes, including rates of litter decomposition. Currently, the few remaining nativedominated lowland wet forests in Hawaii are being invaded by Falcataria moluccana, a large, fast-growing, N2-fixing tree. In this study, we sought to determine the extent to...

Interplay of growth rate and xylem plasticity for optimal coordination of carbon and hydraulic economies in Fraxinus ornus trees.

PubMed

Petit, Giai; Savi, Tadeja; Consolini, Martina; Anfodillo, Tommaso; Nardini, Andrea

2016-11-01

Efficient leaf water supply is fundamental for assimilation processes and tree growth. Renovating the architecture of the xylem transport system requires an increasing carbon investment while growing taller, and any deficiency of carbon availability may result in increasing hydraulic constraints to water flow. Therefore, plants need to coordinate carbon assimilation and biomass allocation to guarantee an efficient and safe long-distance transport system. We tested the hypothesis that reduced branch elongation rates together with carbon-saving adjustments of xylem anatomy hydraulically compensate for the reduction in biomass allocation to xylem. We measured leaf biomass, hydraulic and anatomical properties of wood segments along the main axis of branches in 10 slow growing (SG) and 10 fast growing (FG) Fraxinus ornus L. trees. Branches of SG trees had five times slower branch elongation rate (7 vs 35 cm year -1 ), and produced a higher leaf biomass (P < 0.0001) and thinner xylem rings with fewer but larger vessels (P < 0.0001). On the contrary, we found no differences between SG and FG trees in terms of leaf-specific conductivity (P > 0.05) and xylem safety (Ψ 50 ≈ -3.2 MPa). Slower elongation rate coupled with thinner annual rings and larger vessels allows the reduction of carbon costs associated with growth, while maintaining similar leaf-specific conductivity and xylem safety. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Transcriptomic Analysis of Multipurpose Timber Yielding Tree Neolamarckia cadamba during Xylogenesis Using RNA-Seq.

PubMed

Ouyang, Kunxi; Li, Juncheng; Zhao, Xianhai; Que, Qingmin; Li, Pei; Huang, Hao; Deng, Xiaomei; Singh, Sunil Kumar; Wu, Ai-Min; Chen, Xiaoyang

2016-01-01

Neolamarckia cadamba is a fast-growing tropical hardwood tree that is used extensively for plywood and pulp production, light furniture fabrication, building materials, and as a raw material for the preparation of certain indigenous medicines. Lack of genomic resources hampers progress in the molecular breeding and genetic improvement of this multipurpose tree species. In this study, transcriptome profiling of differentiating stems was performed to understand N. cadamba xylogenesis. The N. cadamba transcriptome was sequenced using Illumina paired-end sequencing technology. This generated 42.49 G of raw data that was then de novo assembled into 55,432 UniGenes with a mean length of 803.2bp. Approximately 47.8% of the UniGenes (26,487) were annotated against publically available protein databases, among which 21,699 and 7,754 UniGenes were assigned to Gene Ontology categories (GO) and Clusters of Orthologous Groups (COG), respectively. 5,589 UniGenes could be mapped onto 116 pathways using the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway database. Among 6,202 UniGenes exhibiting differential expression during xylogenesis, 1,634 showed significantly higher levels of expression in the basal and middle stem segments compared to the apical stem segment. These genes included NAC and MYB transcription factors related to secondary cell wall biosynthesis, genes related to most metabolic steps of lignin biosynthesis, and CesA genes involved in cellulose biosynthesis. This study lays the foundation for further screening of key genes associated with xylogenesis in N. cadamba as well as enhancing our understanding of the mechanism of xylogenesis in fast-growing trees.

Microalgae bioprospecting at NREL

ScienceCinema

Elliott, Lee

2018-02-02

Prospecting for elusive fast-growing, oily microalgae is a soggy, muddy, rewarding job for NREL researcher Lee Elliott. Not only do algae grow in unlikely settings, but their ability to convert the light they receive into biomass has the potential to outperform that of land plants. Trees, grasses and shrubs typically are not very efficient in capturing and converting the sun's energy into biomass, but some algae are believed to be capable of much higher efficiencies, with some scientists thinking ideal strains may be able to approach the maximum theoretical photosynthetic efficiency under the right conditions.

Insect outbreak shifts the direction of selection from fast to slow growth rates in the long-lived conifer Pinus ponderosa

PubMed Central

Sala, Anna

2017-01-01

Long generation times limit species’ rapid evolution to changing environments. Trees provide critical global ecosystem services, but are under increasing risk of mortality because of climate change-mediated disturbances, such as insect outbreaks. The extent to which disturbance changes the dynamics and strength of selection is unknown, but has important implications on the evolutionary potential of tree populations. Using a 40-y-old Pinus ponderosa genetic experiment, we provide rare evidence of context-dependent fluctuating selection on growth rates over time in a long-lived species. Fast growth was selected at juvenile stages, whereas slow growth was selected at mature stages under strong herbivory caused by a mountain pine beetle (Dendroctonus ponderosae) outbreak. Such opposing forces led to no net evolutionary response over time, thus providing a mechanism for the maintenance of genetic diversity on growth rates. Greater survival to mountain pine beetle attack in slow-growing families reflected, in part, a host-based life-history trade-off. Contrary to expectations, genetic effects on tree survival were greatest at the peak of the outbreak and pointed to complex defense responses. Our results suggest that selection forces in tree populations may be more relevant than previously thought, and have implications for tree population responses to future environments and for tree breeding programs. PMID:28652352

Modelo empirico integral de una plantacion de Eucalyptus grandis en Concordia, Entre Rios

Treesearch

Jorge Frangi; Carolina Perez; Juan Goya; Natalia Teson; Marcelo Barrera; Marcelo Arturi

2016-01-01

The Argentinian Mesopotamia is the core of fast-growing tree species plantations of the country. Eucalyptus grandis plantations constitute 90 % of the forested area with Eucalyptus spp. in NE Entre Rios. Based on previous studies on structural and functional features, a comprehensive model is here proposed on emergence of new properties linked to matter and ecosystem...

Total Belowground Carbon Allocation in a Fast-growing Eucalyptus Plantation Estimated Using a Carbon Balance Approach

Treesearch

Christian P. Giardina; Michael G. Ryan

2002-01-01

Trees allocate a large portion of gross primary production belowground for the production and maintenance of roots and mycorrhizae. The difficulty of directly measuring total belowground carbon allocation (TBCA) has limited our understanding of belowground carbon (C) cycling and the factors that control this important flux. We measured TBCA over 4 years using a...

Climatic change and assisted migration: Strategic options for forest and conservation nurseries

Treesearch

Mary I. Williams; R. Kasten Dumroese

2013-01-01

In light of current studies (for example, Gray and Hamann 2012; Zhu and others 2012) that show climate will change faster than plants can adapt or migrate naturally, it begs the question, "What does this mean for forestry, specifically forest and conservation nurseries?" Growing trees that just survive may become more important than promoting fast growth...

HOW to Identify and Manage Dutch Elm Disease

Treesearch

Linda Haugen

1998-01-01

At one time, the American elm was considered to be an ideal street tree because it was graceful, long-lived, fast growing, and tolerant of compacted soils and air pollution. Then Dutch elm disease (DED) was introduced and began devastating the elm population. Estimates of DED losses of elm in communities and woodlands across the U.S. are staggering (figure 1). Because...

Fast-slow continuum and reproductive strategies structure plant life-history variation worldwide.

PubMed

Salguero-Gómez, Roberto; Jones, Owen R; Jongejans, Eelke; Blomberg, Simon P; Hodgson, David J; Mbeau-Ache, Cyril; Zuidema, Pieter A; de Kroon, Hans; Buckley, Yvonne M

2016-01-05

The identification of patterns in life-history strategies across the tree of life is essential to our prediction of population persistence, extinction, and diversification. Plants exhibit a wide range of patterns of longevity, growth, and reproduction, but the general determinants of this enormous variation in life history are poorly understood. We use demographic data from 418 plant species in the wild, from annual herbs to supercentennial trees, to examine how growth form, habitat, and phylogenetic relationships structure plant life histories and to develop a framework to predict population performance. We show that 55% of the variation in plant life-history strategies is adequately characterized using two independent axes: the fast-slow continuum, including fast-growing, short-lived plant species at one end and slow-growing, long-lived species at the other, and a reproductive strategy axis, with highly reproductive, iteroparous species at one extreme and poorly reproductive, semelparous plants with frequent shrinkage at the other. Our findings remain consistent across major habitats and are minimally affected by plant growth form and phylogenetic ancestry, suggesting that the relative independence of the fast-slow and reproduction strategy axes is general in the plant kingdom. Our findings have similarities with how life-history strategies are structured in mammals, birds, and reptiles. The position of plant species populations in the 2D space produced by both axes predicts their rate of recovery from disturbances and population growth rate. This life-history framework may complement trait-based frameworks on leaf and wood economics; together these frameworks may allow prediction of responses of plants to anthropogenic disturbances and changing environments.

Changes in Carbon Pool and Stand Structure of a Native Subtropical Mangrove Forest after Inter-Planting with Exotic Species Sonneratia apetala

PubMed Central

Lu, Weizhi; Yang, Shengchang; Chen, Luzhen; Wang, Wenqing; Du, Xiaona; Wang, Canmou; Ma, Yan; Lin, Guangxuan; Lin, Guanghui

2014-01-01

In this study, we compared stand structure, biomass and soil carbon pools, and litterfall production between a mixed mangrove forest consisting of Aegiceras corniculatum inter-planted with the exotic Sonneratia apetala and a native monospecific forest dominated by A. corniculatum in the intertidal area of Zhanjiang, Guangdong Province, southeast China. The goal of this study was to test the hypothesis that inter-planting fast growing exotic mangrove S. apetala into subtropical native mangrove forests will significantly increase C sequestration. Although the tree heights and basal diameters of S. apetala were significantly higher than those of A. corniculatum, the density of the 12-year-old S. apetala trees in the mixed forest was much smaller than that of A. corniculatum in the monospecific forest. In contrast to several previous studies on S. apetala forests planted directly on mangrove-free mudflats, the mixed mangrove forest showed no significant difference in either standing biomass or soil carbon pools from the native monospecific mangrove forest (p = 0.294 and 0.073, respectively) twelve years after inter-planting with S. apetala. Moreover, carbon cycling was likely speeded up after inter-planting S. apetala due to higher litterfall input and lower C/N ratio. Thus, inter-planting fast-growing S. apetala into native mangrove forest is not an effective way to increase carbon sequestration in this subtropical mangrove forest. Given that exotic plant species may exert negative impact on native mangrove species and related epifauna, this fast-growing mangrove species is not suitable for mangrove plantation projects aiming mainly at enhancing carbon sequestration. PMID:24618793

Quality of trace element contaminated soils amended with compost under fast growing tree Paulownia fortunei plantation.

PubMed

Madejón, P; Xiong, J; Cabrera, F; Madejón, E

2014-11-01

The use of fast growing trees could be an alternative in trace element contaminated soils to stabilize these elements and improve soil quality. In this study we investigate the effect of Paulownia fortunei growth on trace element contaminated soils amended with two organic composts under semi-field conditions for a period of 18 months. The experiment was carried out in containers filled with tree different soils, two contaminated soils (neutral AZ and acid V) and a non contaminated soil, NC. Three treatments per soil were established: two organic amendments (alperujo compost, AC, and biosolid compost, BC) and a control without amendment addition. We study parameters related with fertility and contamination in soils and plants. Paulownia growth and amendments increased pH in acid soils whereas no effect of these factors was observed in neutral soils. The plant and the amendments also increased organic matter and consequently, soil fertility. Positive results were also found in soils that were only affected by plant growth (without amendment). A general improvement of "soil biochemical quality" was detected over time and treatments, confirming the positive effect of amendments plus paulownia. Even in contaminated soils, except for Cu and Zn, trace element concentrations in leaves were in the normal range for plants. Results of this mid-term study showed that Paulownia fortunei is a promising species for phytoremediation of trace element polluted soils. Copyright © 2014 Elsevier Ltd. All rights reserved.

Black willow tree improvement: development of a biomass species for marginal agricultural land in the lower Mississippi alluvial valley

Treesearch

Rochelle Brazas Bailey; Randall J. Rousseau; Emile Gardiner; Jason C. Mack

2014-01-01

Short rotation woody crops, such as willows (Salix spp.), continue to be examined as biomass species because of their fast growth, ease of vegetative propagation, and ability to be coppice regenerated. Black willow (Salix nigra Marsh.) fits well into a biomass program for the southern United States because of its ability to grow on...

Bauhinia purpurea DC.ex Walp.

Treesearch

K.F. Connor

2002-01-01

Bauhinia purpurea is a fast growing small to medium-sized evergreen tree, reaching 7.6 m in height and 17.8 cm in diameter. It can reach a height of 4.6 m in less than 2 years. The bark is light gray and can be either smooth or finely fissured. The species is a native of southeastern Asia from India to China and is planted in Florida, Hawaii,...

Mapping aboveground carbon stocks using LiDAR data in Eucalyptus spp. plantations in the state of Sao Paulo, Brazil

Treesearch

Carlos Alberto Silva; Carine Klauberg; Samuel de Padua Chaves e Carvalho; Andrew T. Hudak; e Luiz Carlos Estraviz Rodriguez

2014-01-01

Fast growing plantation forests provide a low-cost means to sequester carbon for greenhouse gas abatement. The aim of this study was to evaluate airborne LiDAR (Light Detection And Ranging) to predict aboveground carbon (AGC) stocks in Eucalyptus spp. plantations. Biometric parameters (tree height (Ht) and diameter at breast height (DBH)) were collected from...

Development of integrated management practices for the control of Chinese tallow on Parris Island Marine Corps Recruit Depot

Treesearch

Lauren S. Pile; G. Geoff Wang; Patricia A. Layton

2015-01-01

Chinese tallow [Triadica sebifera (L.) Small] is an aggressive, fast-growing, highly adaptable invasive tree of the southeastern United States coastal region. Since its introduction in the early 1800s, Chinese tallow has become a serious threat to native grassland and forest communities from mid-coastal North Carolina to Northern Florida and West to Central Texas

Parallel Continuous Flow: A Parallel Suffix Tree Construction Tool for Whole Genomes

PubMed Central

Farreras, Montse

2014-01-01

Abstract The construction of suffix trees for very long sequences is essential for many applications, and it plays a central role in the bioinformatic domain. With the advent of modern sequencing technologies, biological sequence databases have grown dramatically. Also the methodologies required to analyze these data have become more complex everyday, requiring fast queries to multiple genomes. In this article, we present parallel continuous flow (PCF), a parallel suffix tree construction method that is suitable for very long genomes. We tested our method for the suffix tree construction of the entire human genome, about 3GB. We showed that PCF can scale gracefully as the size of the input genome grows. Our method can work with an efficiency of 90% with 36 processors and 55% with 172 processors. We can index the human genome in 7 minutes using 172 processes. PMID:24597675

Development of annualized diameter and height growth equations for red alder: preliminary results.

Treesearch

Aaron Weiskittel; Sean M. Garber; Greg Johnson; Doug Maguire; Robert A. Monserud

2006-01-01

Most individual-tree based growth and yield models use a 5- to 10-year time step, which can make projections for a fast-growing species like red alder quite difficult. Further, it is rather cumbersome to simulate the effects of intensive silvicultural treatments such as thinning or pruning on a time step longer than one year given the highly dynamic nature of growth...

Phylogenetic and population analyses of the invasive brown root-rot pathogen (Phellinus noxius) highlight the existence of at least two distinct populations

Treesearch

J. E. Stewart; N. Sahashi; T. Hattori; M. Akiba; Y. Ota; L. Shuey; R. L. Schlub; N. Atibalentia; F. Brooks; A. M. C. Tang; R. Y. C. Lam; M. W. K. Leung; L. M. Chu; H. S. Kwan; A. Mohd Farid; S. S. Lee; C. -L. Chung; H. -H. Lee; Y.- C. Huang; R. -F. Liou; J. -N. Tsai; P. G. Cannon; J. W. Hanna; N. B. Klopfenstein; M. -S. Kim

2017-01-01

Phellinus noxius (Corner) G. H. Cunn is a vastly destructive, fast-growing pathogen that affects a wide range of woody hosts in pan-tropical areas, including Asia, Australia, Africa, and Oceania (Ann et al. 2002). This invasive pathogen causes brown root-rot disease on cacao, coffee, and rubber, as well as diverse fruit, nut, ornamental, and other native/exotic trees,...

Assessment of the Flood Problems of the Taunton River Basin Massachusetts.

DTIC Science & Technology

1978-12-01

essential for fish and provides a habitat for numerous varieties of aquatic oriented wildlife species. Of the com- bined forested wetland and open forest...Detailed flood elevation data essential for operation of regula- tions. Flood velocities, flood duration, wave action, erosion pr,,- blems and other...along with the preservation of as much trees and shrubs are essential . Where possible fast growing annual grass seed should be used, intermixed with

Testing the utility of the 3-PG model for growth of Eucalyptus grandis x urophylla with natural and manipulated supplies of water and nutrients

Treesearch

Jose Luiz Stape; Michael G. Ryan; Dan Binkley

2004-01-01

The productivity of fast-growing tropical plantations depends, in part, on the ability of trees to obtain and utilize site resources, and the allocation of fixed carbon (C) to wood production. Simulation models can represent these processes and interactions, but the value of these models depends on their ability to improve predictions of stand growth relative to...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Labrecque, M.; Teodorescu, T.I.

Since 1989, short rotation and intensive culture (SRIC) techniques have been experimented to grow various fast growing species of trees and shrubs for energy plantation or environmental purposes. The objectives were to evaluate the biomass productivity with respect to (1) different weed control methods during the establishment phase; (2) drainage conditions and soil quality of the plantation site; and (3) frequency of coppicing. Native or introduced species of willows and various species of shrubs, such as honeysuckle and cornel, were grown in an experimental design in the nursery of the Montreal Botanical Garden on former agricultural land. Productivity, in tonsmore » of dry material per hectare, was evaluated and compared by harvesting shoot and branch samples at the end of each growing season. Weed control is essential to the establishment of trees in SRIC. When weed repression was applied during the two first growing seasons, biomass productivity was 4 to 5 times greater than the biomass produced on the control plot of the well drained site. With good weed control, willows can yield more than 20 tons of dry material on well drained site and near 15 tons on a poorly drained site, only two years after plantation. The growth potential of shrub species is also interesting. Some of them were able to produce up to 10 tons of dry biomass per hectare per year, which is appreciable considering that such species can be used on marginal lands and for the fixation of river banks. Frequency of coppicing also influences productivity. For willows, we determined that three-year rotation cycle allowed the highest biomass productivity. Shrubs should be coppiced each year to obtain the best results. Fast growing species and SRIC techniques are not only a good way of producing wood and alcohol for energy but they also represent a way of rapidly colonizing degraded or marginal sites and of fixing river banks.« less

High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India

DOE PAGES

Gehlot, Hukam Singh; Ardley, Julie; Tak, Nisha; ...

2016-06-23

Ensifer sp. PC2 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a nitrogen-fixing nodule of the tree legume P. cineraria (L.) Druce (Khejri), which is a keystone species that grows in arid and semi-arid regions of the Indian Thar desert. Strain PC2 exists as a dominant saprophyte in alkaline soils of Western Rajasthan. It is fast growing, well-adapted to arid conditions and is able to form an effective symbiosis with several annual crop legumes as well as species of mimosoid trees and shrubs. Here we describe the features of Ensifer sp. PC2, together with genome sequence informationmore » and its annotation. The 8,458,965 bp high-quality permanent draft genome is arranged into 171 scaffolds of 171 contigs containing 8,344 protein-coding genes and 139 RNA-only encoding genes, and is one of the rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.« less

High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gehlot, Hukam Singh; Ardley, Julie; Tak, Nisha

Ensifer sp. PC2 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a nitrogen-fixing nodule of the tree legume P. cineraria (L.) Druce (Khejri), which is a keystone species that grows in arid and semi-arid regions of the Indian Thar desert. Strain PC2 exists as a dominant saprophyte in alkaline soils of Western Rajasthan. It is fast growing, well-adapted to arid conditions and is able to form an effective symbiosis with several annual crop legumes as well as species of mimosoid trees and shrubs. Here we describe the features of Ensifer sp. PC2, together with genome sequence informationmore » and its annotation. The 8,458,965 bp high-quality permanent draft genome is arranged into 171 scaffolds of 171 contigs containing 8,344 protein-coding genes and 139 RNA-only encoding genes, and is one of the rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.« less

Tree-ring width based temperature and precipitation reconstruction in southeastern China

NASA Astrophysics Data System (ADS)

Shi, Jiangfeng; Shi, Shiyuan; Zhao, Yesi; Lu, Huayu

2017-04-01

Southeastern China is a subtropical region where the climate is dominated by the Asian monsoon climate system, with high temperature and precipitation in summer, and low temperature and precipitation in winter. Tree-ring research has been developed very fast in the past decade in the region. Some studies show that coniferous tree growth in the region is limited by temperatures in prior winter and during the growing season (i.e., prior November to current April, April to July, etc.), however to different limiting levels. Higher temperature in the dormant season means less damage to leaves and roots, and less consumption of previously stored carbohydrates and starches that can be used for tree growth in the coming year. The mechanism of positive relationships with the growing season is the same as that in high-latitude and high-elevation regions. The temperature reconstructions match each other very well at decadal to multi-decadal scales during the past 150 years at a large spatial scale, that is, of 700 km away, even though there are some discrepancies in the early part of the comparisons. Possible reasons for the discrepancies may include local temperature differences, small sample depth in the early part of the reconstructions, and/or juvenile effects. Generally, there is a weak precipitation signal in tree-ring width chronlogies. However, some studies have shown potentials in precipitation reconstruction in recent years, such as using tree-ring width chrnologies by taking samples at some special sites, using adjusted late-wood width chronlogies, and using stable isotopes. Thus, we might have a comprehensive understanding of the Asian monsson climate system over the past several centuries through temperature and precipitation reconstruction together using tree-ring series.

The Exotic Legume Tree Species Acacia holosericea Alters Microbial Soil Functionalities and the Structure of the Arbuscular Mycorrhizal Community▿

PubMed Central

Remigi, P.; Faye, A.; Kane, A.; Deruaz, M.; Thioulouse, J.; Cissoko, M.; Prin, Y.; Galiana, A.; Dreyfus, B.; Duponnois, R.

2008-01-01

The response of microbial functional diversity as well as its resistance to stress or disturbances caused by the introduction of an exotic tree species, Acacia holosericea, ectomycorrhized or not with Pisolithus albus, was examined. The results show that this ectomycorrhizal fungus promotes drastically the growth of this fast-growing tree species in field conditions after 7 years of plantation. Compared to the crop soil surrounding the A. holosericea plantation, this exotic tree species, associated or not with the ectomycorrhizal symbiont, induced strong modifications in soil microbial functionalities (assessed by measuring the patterns of in situ catabolic potential of microbial communities) and reduced soil resistance in response to increasing stress or disturbance (salinity, temperature, and freeze-thaw and wet-dry cycles). In addition, A. holosericea strongly modified the structure of arbuscular mycorrhizal fungus communities. These results show clearly that exotic plants may be responsible for important changes in soil microbiota affecting the structure and functions of microbial communities. PMID:18203858

Leaf Protein and Mineral Concentrations across the "Miracle Tree" Genus Moringa.

PubMed

Olson, Mark E; Sankaran, Renuka P; Fahey, Jed W; Grusak, Michael A; Odee, David; Nouman, Wasif

2016-01-01

The moringa tree Moringa oleifera is a fast-growing, drought-resistant tree cultivated across the lowland dry tropics worldwide for its nutritious leaves. Despite its nutritious reputation, there has been no systematic survey of the variation in leaf nutritional quality across M. oleifera grown worldwide, or of the other species of the genus. To guide informed use of moringa, we surveyed protein, macro-, and micro- nutrients across 67 common garden samples of 12 Moringa taxa, including 23 samples of M. oleifera. Moringa oleifera, M. concanensis, M. stenopetala, an M. concanensis X oleifera hybrid, and M. longituba were highest in protein, with M. ruspoliana having the highest calcium levels. A protein-dry leaf mass tradeoff may preclude certain breeding possibilities, e.g. maximally high protein with large leaflets. These findings identify clear priorities and limitations for improved moringa varieties with traits such as high protein, calcium, or ease of preparation.

Tree demography dominates long-term growth trends inferred from tree rings.

PubMed

Brienen, Roel J W; Gloor, Manuel; Ziv, Guy

2017-02-01

Understanding responses of forests to increasing CO 2 and temperature is an important challenge, but no easy task. Tree rings are increasingly used to study such responses. In a recent study, van der Sleen et al. (2014) Nature Geoscience, 8, 4 used tree rings from 12 tropical tree species and find that despite increases in intrinsic water use efficiency, no growth stimulation is observed. This challenges the idea that increasing CO 2 would stimulate growth. Unfortunately, tree ring analysis can be plagued by biases, resulting in spurious growth trends. While their study evaluated several biases, it does not account for all. In particular, one bias may have seriously affected their results. Several of the species have recruitment patterns, which are not uniform, but clustered around one specific year. This results in spurious negative growth trends if growth rates are calculated in fixed size classes, as 'fast-growing' trees reach the sampling diameter earlier compared to slow growers and thus fast growth rates tend to have earlier calendar dates. We assessed the effect of this 'nonuniform age bias' on observed growth trends and find that van der Sleen's conclusions of a lack of growth stimulation do not hold. Growth trends are - at least partially - driven by underlying recruitment or age distributions. Species with more clustered age distributions show more negative growth trends, and simulations to estimate the effect of species' age distributions show growth trends close to those observed. Re-evaluation of the growth data and correction for the bias result in significant positive growth trends of 1-2% per decade for the full period, and 3-7% since 1950. These observations, however, should be taken cautiously as multiple biases affect these trend estimates. In all, our results highlight that tree ring studies of long-term growth trends can be strongly influenced by biases if demographic processes are not carefully accounted for. © 2016 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

Diurnal and seasonal changes in stem increment and water use by yellow poplar trees in response to environmental stress.

PubMed

McLaughlin, Samuel B; Wullschleger, Stan D; Nosal, Miloslav

2003-11-01

To evaluate indicators of whole-tree physiological responses to climate stress, we determined seasonal, daily and diurnal patterns of growth and water use in 10 yellow poplar (Liriodendron tulipifera L.) trees in a stand recently released from competition. Precise measurements of stem increment and sap flow made with automated electronic dendrometers and thermal dissipation probes, respectively, indicated close temporal linkages between water use and patterns of stem shrinkage and swelling during daily cycles of water depletion and recharge of extensible outer-stem tissues. These cycles also determined net daily basal area increment. Multivariate regression models based on a 123-day data series showed that daily diameter increments were related negatively to vapor pressure deficit (VPD), but positively to precipitation and temperature. The same model form with slight changes in coefficients yielded coefficients of determination of about 0.62 (0.57-0.66) across data subsets that included widely variable growth rates and VPDs. Model R2 was improved to 0.75 by using 3-day running mean daily growth data. Rapid recovery of stem diameter growth following short-term, diurnal reductions in VPD indicated that water stored in extensible stem tissues was part of a fast recharge system that limited hydration changes in the cambial zone during periods of water stress. There were substantial differences in the seasonal dynamics of growth among individual trees, and analyses indicated that faster-growing trees were more positively affected by precipitation, solar irradiance and temperature and more negatively affected by high VPD than slower-growing trees. There were no negative effects of ozone on daily growth rates in a year of low ozone concentrations.

Integrated analysis of gene expression from carbon metabolism, proteome and metabolome, reveals altered primary metabolism in Eucalyptus grandis bark, in response to seasonal variation.

PubMed

Budzinski, Ilara Gabriela Frasson; Moon, David H; Morosini, Júlia Silva; Lindén, Pernilla; Bragatto, Juliano; Moritz, Thomaz; Labate, Carlos Alberto

2016-07-01

Seasonal variation is presumed to play an important role in the regulation of tree growth, especially for Eucalyptus grandis, a fast-growing tree. This variation may induce changes in the whole tree at transcriptional, protein and metabolite levels. Bark represents an important group of tissues that protect trees from desiccation and pathogen attack, and it has been identified as potential feedstock for lignocellulosic derived biofuels. Despite the growing interest, little is known about the molecular mechanisms that regulates bark metabolism, particularly in tropical countries. In this study we report the changes observed in the primary metabolism of E. grandis bark during two contrasting seasons in Brazil, summer (wet) and winter (dry), through the combination of transcripts (RT-qPCR), proteome (2-DE gels) and metabolome (GC-MS) analysis, in an integrated manner. Twenty-four genes, involved in carbon metabolism, were analyzed in the two seasons. Eleven were up-regulated in summer, three were up-regulated in winter and ten did not show statistical differences in the expression pattern. The proteomic analysis using 2-DE gels showed 77 proteins expressing differences in abundance, with 38 spots up-regulated in summer and 37 in winter. Different metabolites significantly accumulated during winter. This study revealed a metabolic reconfiguration in the primary metabolism of E. grandis bark, triggered by seasonal variation. Transcripts and protein data suggests that during winter carbohydrate formation seems to be favored by tree metabolism. Glucose, fructose and sucrose accumulated at significant levels during the winter.

DendroBLAST: approximate phylogenetic trees in the absence of multiple sequence alignments.

PubMed

Kelly, Steven; Maini, Philip K

2013-01-01

The rapidly growing availability of genome information has created considerable demand for both fast and accurate phylogenetic inference algorithms. We present a novel method called DendroBLAST for reconstructing phylogenetic dendrograms/trees from protein sequences using BLAST. This method differs from other methods by incorporating a simple model of sequence evolution to test the effect of introducing sequence changes on the reliability of the bipartitions in the inferred tree. Using realistic simulated sequence data we demonstrate that this method produces phylogenetic trees that are more accurate than other commonly-used distance based methods though not as accurate as maximum likelihood methods from good quality multiple sequence alignments. In addition to tests on simulated data, we use DendroBLAST to generate input trees for a supertree reconstruction of the phylogeny of the Archaea. This independent analysis produces an approximate phylogeny of the Archaea that has both high precision and recall when compared to previously published analysis of the same dataset using conventional methods. Taken together these results demonstrate that approximate phylogenetic trees can be produced in the absence of multiple sequence alignments, and we propose that these trees will provide a platform for improving and informing downstream bioinformatic analysis. A web implementation of the DendroBLAST method is freely available for use at http://www.dendroblast.com/.

Differences in xylogenesis between dominant and suppressed trees.

PubMed

Liu, Shushan; Li, Xiaoxia; Rossi, Sergio; Wang, Lily; Li, Wei; Liang, Eryuan; Leavitt, Steven W

2018-05-01

Most dendroecological studies focus on dominant trees, but little is known about the growing season of trees belonging to different size classes and their sensitivity to biotic factors. The objective of this study was to compare the dynamics of xylem formation between dominant and suppressed trees of Abies fabri of similar age growing in the Gongga Mountains, southeastern Tibetan Plateau, and to identify the association between xylem growth and climate. The timing and duration of xylogenesis in histological sections were investigated weekly during the 2013-2015 growing seasons. Our investigation found that timing and duration of xylogenesis varied with canopy position and its associated tree size. Xylogenesis started 6-14 days earlier, and ended 5-11 days later in dominant trees than in suppressed trees, resulting in a significantly longer growing season. Dominant trees also exhibited higher temperature sensitivity of tracheid production rate than suppressed trees. The observed differences in xylogenesis among trees suggested that competition affects tree growth by reducing the growing period in suppressed trees. Representative climate-growth relationships should involve trees of all size classes when evaluating the effects of the environment on forest dynamics. © 2018 Botanical Society of America.

Rain forest fragmentation and the proliferation of successional trees.

PubMed

Laurance, William F; Nascimento, Henrique E M; Laurance, Susan G; Andrade, Ana C; Fearnside, Philip M; Ribeiro, José E L; Capretz, Robson L

2006-02-01

The effects of habitat fragmentation on diverse tropical tree communities are poorly understood. Over a 20-year period we monitored the density of 52 tree species in nine predominantly successional genera (Annona, Bellucia, Cecropia, Croton, Goupia, Jacaranda, Miconia, Pourouma, Vismia) in fragmented and continuous Amazonian forests. We also evaluated the relative importance of soil, topographic, forest dynamic, and landscape variables in explaining the abundance and species composition of successional trees. Data were collected within 66 permanent 1-ha plots within a large (approximately 1000 km2) experimental landscape, with forest fragments ranging from 1 to 100 ha in area. Prior to forest fragmentation, successional trees were uncommon, typically comprising 2-3% of all trees (> or =10 cm diameter at breast height [1.3 m above the ground surface]) in each plot. Following fragmentation, the density and basal area of successional trees increased rapidly. By 13-17 years after fragmentation, successional trees had tripled in abundance in fragment and edge plots and constituted more than a quarter of all trees in some plots. Fragment age had strong, positive effects on the density and basal area of successional trees, with no indication of a plateau in these variables, suggesting that successional species could become even more abundant in fragments over time. Nonetheless, the 52 species differed greatly in their responses to fragmentation and forest edges. Some disturbance-favoring pioneers (e.g., Cecropia sciadophylla, Vismia guianensis, V. amazonica, V. bemerguii, Miconia cf. crassinervia) increased by >1000% in density on edge plots, whereas over a third (19 of 52) of all species remained constant or declined in numbers. Species responses to fragmentation were effectively predicted by their median growth rate in nearby intact forest, suggesting that faster-growing species have a strong advantage in forest fragments. An ordination analysis revealed three main gradients in successional-species composition across our study area. Species gradients were most strongly influenced by the standlevel rate of tree mortality on each plot and by the number of nearby forest edges. Species-composition also varied significantly among different cattle ranches, which differed in their surrounding matrices and disturbance histories. These same variables were also the best predictors of total successional-tree abundance and species richness. Successional-tree assemblages in fragment interior plots (>150 m from edge), which are subjected to fragment area effects but not edge effects, did not differ significantly from those in intact forest, indicating that area effects per se had little influence on successional trees. Soils and topography also had little discernable effect on these species. Collectively, our results indicate that successional-tree species proliferate rapidly in fragmented Amazonian forests, largely as a result of chronically elevated tree mortality near forest edges and possibly an increased seed rain from successional plants growing in nearby degraded habitats. The proliferation of fast-growing successional trees and correlated decline of old-growth trees will have important effects on species composition, forest dynamics, carbon storage, and nutrient cycling in fragmented forests.

Differential distribution of metals in tree tissues growing on reclaimed coal mine overburden dumps, Jharia coal field (India).

PubMed

Rana, Vivek; Maiti, Subodh Kumar

2018-04-01

Opencast bituminous coal mining invariably generates huge amount of metal-polluted waste rocks (stored as overburden (OB) dumps) and reclaimed by planting fast growing hardy tree species which accumulate metals in their tissues. In the present study, reclaimed OB dumps located in Jharia coal field (Jharkhand, India) were selected to assess the accumulation of selected metals (Pb, Zn, Mn, Cu and Co) in tissues (leaf, stem bark, stem wood, root bark and root wood) of two commonly planted tree species (Acacia auriculiformis A.Cunn. ex Benth. and Melia azedarach L.). In reclaimed mine soil (RMS), the concentrations of pseudo-total and available metals (DTPA-extractable) were found 182-498 and 196-1877% higher, respectively, than control soil (CS). The positive Spearman's correlation coefficients between pseudo-total concentration of Pb and Cu (r = 0.717; p < 0.05), Pb and Co (r = 0.650; p < 0.05), Zn and Mn (0.359), Cu and Co (r = 0.896; p < 0.01) suggested similar sources for Pb-Cu-Co and Mn-Zn. Among the five tree tissues considered, Pb selectively accumulated in root bark, stem bark and leaves; Zn and Mn in leaves; and Cu in root wood and stem wood. These results suggested metal accumulation to be "tissue-specific". The biological indices (BCF, TF leaf , TF stem bark and TF stem wood ) indicated variation in metal uptake potential of different tree tissues. The study indicated that A. auriculiformis could be employed for Mn phytoextraction (BCF, TF leaf , TF stem bark and TF stem wood  > 1). The applicability of both the trees in Cu phytostabilization (BCF > 1; TF leaf , TF stem bark and TF stem wood  < 1) was suggested. The study enhanced knowledge about the selection of tree species for the phytoremediation of coal mine OB dumps and specific tree tissues for monitoring metal pollution.

Effects of summer and winter harvesting on element phytoextraction efficiency of Salix and Populus clones planted on contaminated soil.

PubMed

Kubátová, Pavla; Száková, Jiřina; Břendová, Kateřina; Kroulíková-Vondráčková, Stanislava; Mercl, Filip; Tlustoš, Pavel

2018-04-16

The clones of fast-growing trees (FGTs) were investigated for phytoextraction of soil contaminated with risk elements (REs), especially Cd, Pb, and Zn. As a main experimental factor, the potential effect of biomass harvesting time was assessed. The field experiment with two Salix clones (S1 - (Salix schwerinii × Salix viminalis) × S. viminalis, S2 - S. × smithiana) and two Populus clones (P1 - Populus maximowiczii × Populus nigra, P2 - P. nigra) was established in April 2009. Shoots of all clones were first harvested in February 2012. After two further growing seasons, the first half of the trees was harvested in September 2013 before leaf fall (summer harvest) and the second half in February 2014 (winter harvest). Remediation factors (RFs) for all clones and all REs (except Pb for clone S1) were higher in the summer harvest. The highest annual RFs for Cd and for Zn (1.34 and 0.67%, respectively) were found for clone S2 and were significantly higher than other clones. Although no increased mortality of trees harvested in the summer was detected in the following season, the effect of summer harvesting on the phytoextraction potential of FGTs clones should be investigated in long-term studies.

A New Algorithm Using the Non-Dominated Tree to Improve Non-Dominated Sorting.

PubMed

Gustavsson, Patrik; Syberfeldt, Anna

2018-01-01

Non-dominated sorting is a technique often used in evolutionary algorithms to determine the quality of solutions in a population. The most common algorithm is the Fast Non-dominated Sort (FNS). This algorithm, however, has the drawback that its performance deteriorates when the population size grows. The same drawback applies also to other non-dominating sorting algorithms such as the Efficient Non-dominated Sort with Binary Strategy (ENS-BS). An algorithm suggested to overcome this drawback is the Divide-and-Conquer Non-dominated Sort (DCNS) which works well on a limited number of objectives but deteriorates when the number of objectives grows. This article presents a new, more efficient algorithm called the Efficient Non-dominated Sort with Non-Dominated Tree (ENS-NDT). ENS-NDT is an extension of the ENS-BS algorithm and uses a novel Non-Dominated Tree (NDTree) to speed up the non-dominated sorting. ENS-NDT is able to handle large population sizes and a large number of objectives more efficiently than existing algorithms for non-dominated sorting. In the article, it is shown that with ENS-NDT the runtime of multi-objective optimization algorithms such as the Non-Dominated Sorting Genetic Algorithm II (NSGA-II) can be substantially reduced.

A dual growing method for the automatic extraction of individual trees from mobile laser scanning data

NASA Astrophysics Data System (ADS)

Li, Lin; Li, Dalin; Zhu, Haihong; Li, You

2016-10-01

Street trees interlaced with other objects in cluttered point clouds of urban scenes inhibit the automatic extraction of individual trees. This paper proposes a method for the automatic extraction of individual trees from mobile laser scanning data, according to the general constitution of trees. Two components of each individual tree - a trunk and a crown can be extracted by the dual growing method. This method consists of coarse classification, through which most of artifacts are removed; the automatic selection of appropriate seeds for individual trees, by which the common manual initial setting is avoided; a dual growing process that separates one tree from others by circumscribing a trunk in an adaptive growing radius and segmenting a crown in constrained growing regions; and a refining process that draws a singular trunk from the interlaced other objects. The method is verified by two datasets with over 98% completeness and over 96% correctness. The low mean absolute percentage errors in capturing the morphological parameters of individual trees indicate that this method can output individual trees with high precision.

Field data analysis of asphalt road paving damages caused by tree roots

NASA Astrophysics Data System (ADS)

Weissteiner, Clemens; Rauch, Hans Peter

2015-04-01

Tree root damages are a frequent problem along paved cycling paths and service roads of rivers and streams. Damages occur mostly on streets with thin asphalt layers and especially in the upper part of the pavement structure. The maintainers of these roads are faced with frequent and high annual repair costs in order to guarantee traffic safety and pleasant cycling conditions. The focus of this research project is to get an insight in the processes governing the growth of the tree roots in asphalt layers and to develop test methods to avoid rood penetration into the road structure. Tree vegetation has been analysed selectively along a 300 km long cycle and service path of the Danube River in the region of Austria. Tree characteristics, topographic as well as hydrologic conditions have been analysed at 119 spots with different asphalt damage intensities. On 5 spots additional investigations on the root growth characteristics where performed. First results underline a high potential damage of pioneer trees which are growing naturally along rivers. Mostly, local occurring fast growing tree species penetrated the road layer structure. In a few cases other tree species where as well responsible for road structure damages. The age respectively the size of the trees didn't seem to influence significantly the occurrence of asphalt damages. Road structure damages were found to appear unaffected by hydrologic or topographic conditions. However, results have to be interpreted with care as the investigations represent a temporally limited view of the problem situation. The investigations of the root growth characteristics proved that tree roots penetrate the road structure mostly between the gravel sublayer and the asphalt layer as the layers it selves don't allow a penetration because of their high compaction. Furthermore roots appear to be attracted by condensed water at the underside of the asphalt layer. Further steps of the research project imply testing of different compositions of gravel size mixtures as sublayer material. A coarse gravel size mixture allows the condensed water to drain in deeper layers and inhibits root growth because of mechanical impedance and air pruning of roots.

Parallel peak pruning for scalable SMP contour tree computation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carr, Hamish A.; Weber, Gunther H.; Sewell, Christopher M.

As data sets grow to exascale, automated data analysis and visualisation are increasingly important, to intermediate human understanding and to reduce demands on disk storage via in situ analysis. Trends in architecture of high performance computing systems necessitate analysis algorithms to make effective use of combinations of massively multicore and distributed systems. One of the principal analytic tools is the contour tree, which analyses relationships between contours to identify features of more than local importance. Unfortunately, the predominant algorithms for computing the contour tree are explicitly serial, and founded on serial metaphors, which has limited the scalability of this formmore » of analysis. While there is some work on distributed contour tree computation, and separately on hybrid GPU-CPU computation, there is no efficient algorithm with strong formal guarantees on performance allied with fast practical performance. Here in this paper, we report the first shared SMP algorithm for fully parallel contour tree computation, withfor-mal guarantees of O(lgnlgt) parallel steps and O(n lgn) work, and implementations with up to 10x parallel speed up in OpenMP and up to 50x speed up in NVIDIA Thrust.« less

Acacia mangium: Growing and utilization. MPTS monograph series No. 3

DOE Office of Scientific and Technical Information (OSTI.GOV)

Awang, K.; Taylor, D.

With deforestation in the Asia-Pacific region progressing at the rate of 4.4 million ha per year, many countries have adopted plantation forestry using fast-growing species as a way to sustain the commercial supply of tree products and reduce pressure on natural forests. Acacia mangium (A. mangium) is playing a large role in this development, especially in Indonesia and Malaysia, due to its versatility and its ability to recapture grasslands dominated by the noxious weed, Imperata cylindrica. This monograph consolidates information on A. mangium from published literature, unpublished reports and studies, and observations from those familiar with the species. Priorities formore » future research are included in each chapter and in the final summary.« less

Fast-growing Acer rubrum differs from slow-growing Quercus alba in leaf, xylem and hydraulic trait coordination responses to simulated acid rain.

PubMed

Medeiros, Juliana S; Tomeo, Nicholas J; Hewins, Charlotte R; Rosenthal, David M

2016-08-01

We investigated the effects of historic soil chemistry changes associated with acid rain, i.e., reduced soil pH and a shift from nitrogen (N)- to phosphorus (P)-limitation, on the coordination of leaf water demand and xylem hydraulic supply traits in two co-occurring temperate tree species differing in growth rate. Using a full-factorial design (N × P × pH), we measured leaf nutrient content, water relations, leaf-level and canopy-level gas exchange, total biomass and allocation, as well as stem xylem anatomy and hydraulic function for greenhouse-grown saplings of fast-growing Acer rubrum (L.) and slow-growing Quercus alba (L.). We used principle component analysis to characterize trait coordination. We found that N-limitation, but not P-limitation, had a significant impact on plant water relations and hydraulic coordination of both species. Fast-growing A. rubrum made hydraulic adjustments in response to N-limitation, but trait coordination was variable within treatments and did not fully compensate for changing allocation across N-availability. For slow-growing Q. alba, N-limitation engendered more strict coordination of leaf and xylem traits, resulting in similar leaf water content and hydraulic function across all treatments. Finally, low pH reduced the propensity of both species to adjust leaf water relations and xylem anatomical traits in response to nutrient manipulations. Our data suggest that a shift from N- to P-limitation has had a negative impact on the water relations and hydraulic function of A. rubrum to a greater extent than for Q. alba We suggest that current expansion of A. rubrum populations could be tempered by acidic N-deposition, which may restrict it to more mesic microsites. The disruption of hydraulic acclimation and coordination at low pH is emphasized as an interesting area of future study. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets

PubMed Central

Zhou, Xiaofan; Shen, Xing-Xing; Hittinger, Chris Todd

2018-01-01

Abstract The sizes of the data matrices assembled to resolve branches of the tree of life have increased dramatically, motivating the development of programs for fast, yet accurate, inference. For example, several different fast programs have been developed in the very popular maximum likelihood framework, including RAxML/ExaML, PhyML, IQ-TREE, and FastTree. Although these programs are widely used, a systematic evaluation and comparison of their performance using empirical genome-scale data matrices has so far been lacking. To address this question, we evaluated these four programs on 19 empirical phylogenomic data sets with hundreds to thousands of genes and up to 200 taxa with respect to likelihood maximization, tree topology, and computational speed. For single-gene tree inference, we found that the more exhaustive and slower strategies (ten searches per alignment) outperformed faster strategies (one tree search per alignment) using RAxML, PhyML, or IQ-TREE. Interestingly, single-gene trees inferred by the three programs yielded comparable coalescent-based species tree estimations. For concatenation-based species tree inference, IQ-TREE consistently achieved the best-observed likelihoods for all data sets, and RAxML/ExaML was a close second. In contrast, PhyML often failed to complete concatenation-based analyses, whereas FastTree was the fastest but generated lower likelihood values and more dissimilar tree topologies in both types of analyses. Finally, data matrix properties, such as the number of taxa and the strength of phylogenetic signal, sometimes substantially influenced the programs’ relative performance. Our results provide real-world gene and species tree phylogenetic inference benchmarks to inform the design and execution of large-scale phylogenomic data analyses. PMID:29177474

Growing a Forest for the Trees.

ERIC Educational Resources Information Center

Growing Ideas, 2001

2001-01-01

Describes a tree studies program in a fourth-grade classroom. Students collected local tree seeds and seeds from supermarket fruits, researched growing conditions, and grew seeds under various conditions. Students kept journals on local trees, observing seed dispersal mechanisms and examining rings on trunk slices. Inquiry-based tree studies…

Removal or retention of unmerchantable saplings in Allegheny hardwoods: effect on regeneration after clearcutting

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marquis, D.A.

1981-01-01

Merchantable trees in an old growth stand (mainly beech, (Fagus grandifolia) and supar maple) in NW Pennsylvania were clear felled in September and October 1937, and 4 plots set up containing (a) large (d.b.h. over 1.5 inch), and small residual saplings, (b) primarily small residuals (1-inch d.b.h.) and (c) plots as (a) and (b) but with saplings over 0.5 inch d.b.h. chopped down (moved) in April and May 1938. Plots were tallied in 1938 after mowing, and in 1942, 1947, 1957 and 1972. After 35 years, the 2 mowed plots (c) were dominated by fast-growing, shade-intolerant black cherry (Prunus serotina)more » which accounted for 65% of the b.a. The plot with treatment (a) had fewer, larger trees with some sawtimber size maple and beech. Cherry accounted for 32% b.a. The plot with treatment (b) had trees intermediate in size and composition (cherry 53% b.a.). (Refs. 10).« less

Heavy metals in emergent trees and pioneers from tropical forest with special reference to forest fires and local pollution sources in Sarawak, Malaysia.

PubMed

Breulman, G; Markert, B; Weckert, V; Herpin, U; Yoneda, R; Ogino, K

2002-02-21

Leaf samples of tropical trees, i.e. Dryobalanops lanceolata (Kapur paji), Dipterocarpaceae and Macaranga spp. (Mahang), Euphorbiaceae were analyzed for 21 chemical elements. The pioneer Macaranga spp. exhibited higher concentrations for the majority of elements compared to the emergent species of Dryobalanops lanceolata, which was attributed to the higher physiological activity of the fast growing pioneer species compared to emergent trees. Lead showed rather high concentrations in several samples from the Bakam re-forestation site. This is suggested to be caused by emissions through brick manufacturing and related activities in the vicinity. A comparison of Dryobalanops lanceolata samples collected in 1993, 1995 and 1997 in the Lambir Hills National Park revealed that certain heavy metals, i.e. Co, Cu, Mn, Ni, Pb and Ti showed higher values in 1997 compared to the previous years, which could indicate an atmospheric input from the haze caused by the extensive forest fires raging in Borneo and other parts of Southeast Asia.

Low Herbivory among Targeted Reforestation Sites in the Andean Highlands of Southern Ecuador

PubMed Central

Adams, Marc-Oliver; Fiedler, Konrad

2016-01-01

Insect herbivory constitutes an important constraint in the viability and management of targeted reforestation sites. Focusing on young experimental stands at about 2000 m elevation in southern Ecuador, we examined foliar damage over one season as a function of tree species and habitat. Native tree species (Successional hardwood: Cedrela montana and Tabebuia chrysantha; fast-growing pioneer: Heliocarpus americanus) have been planted among prevailing local landcover types (abandoned pasture, secondary shrub vegetation, and a Pinus patula plantation) in 2003/4. Plantation trees were compared to conspecifics in the spontaneous undergrowth of adjacent undisturbed rainforest matched for height and foliar volume. Specifically, we tested the hypotheses that H. americanus as a pioneer species suffers more herbivory compared to the two successional tree species, and that damage is inversely related to habitat complexity. Overall leaf damage caused by folivorous insects (excluding leafcutter ants) was low. Average leaf loss was highest among T. chrysantha (7.50% ± 0.19 SE of leaf area), followed by H. americanus (4.67% ± 0.18 SE) and C. montana (3.18% ± 0.15 SE). Contrary to expectations, leaf area loss was highest among trees in closed-canopy natural rainforest, followed by pine plantation, pasture, and secondary shrub sites. Harvesting activity of leafcutter ants (Acromyrmex sp.) was strongly biased towards T. chrysantha growing in open habitat (mean pasture: 2.5%; shrub: 10.5%) where it could result in considerable damage (> 90.0%). Insect folivory is unlikely to pose a barrier for reforestation in the tropical Andean mountain forest zone at present, but leafcutter ants may become problematic if local temperatures increase in the wake of global warming. PMID:26963395

Low Herbivory among Targeted Reforestation Sites in the Andean Highlands of Southern Ecuador.

PubMed

Adams, Marc-Oliver; Fiedler, Konrad

2016-01-01

Insect herbivory constitutes an important constraint in the viability and management of targeted reforestation sites. Focusing on young experimental stands at about 2000 m elevation in southern Ecuador, we examined foliar damage over one season as a function of tree species and habitat. Native tree species (Successional hardwood: Cedrela montana and Tabebuia chrysantha; fast-growing pioneer: Heliocarpus americanus) have been planted among prevailing local landcover types (abandoned pasture, secondary shrub vegetation, and a Pinus patula plantation) in 2003/4. Plantation trees were compared to conspecifics in the spontaneous undergrowth of adjacent undisturbed rainforest matched for height and foliar volume. Specifically, we tested the hypotheses that H. americanus as a pioneer species suffers more herbivory compared to the two successional tree species, and that damage is inversely related to habitat complexity. Overall leaf damage caused by folivorous insects (excluding leafcutter ants) was low. Average leaf loss was highest among T. chrysantha (7.50% ± 0.19 SE of leaf area), followed by H. americanus (4.67% ± 0.18 SE) and C. montana (3.18% ± 0.15 SE). Contrary to expectations, leaf area loss was highest among trees in closed-canopy natural rainforest, followed by pine plantation, pasture, and secondary shrub sites. Harvesting activity of leafcutter ants (Acromyrmex sp.) was strongly biased towards T. chrysantha growing in open habitat (mean pasture: 2.5%; shrub: 10.5%) where it could result in considerable damage (> 90.0%). Insect folivory is unlikely to pose a barrier for reforestation in the tropical Andean mountain forest zone at present, but leafcutter ants may become problematic if local temperatures increase in the wake of global warming.

Tree leaf trade-offs are stronger for sub-canopy trees: leaf traits reveal little about growth rates in canopy trees.

PubMed

Wills, Jarrah; Herbohn, John; Hu, Jing; Sohel, Shawkat; Baynes, Jack; Firn, Jennifer

2018-06-01

Can morphological plant functional traits predict demographic rates (e.g., growth) within plant communities as diverse as tropical forests? This is one of the most important next-step questions in trait-based ecology and particularly for global reforestation efforts. Due to the diversity of tropical tree species and their longevity, it is difficult to predict their performance prior to reforestation efforts. In this study, we investigate if simple leaf traits are predictors of the more complex ecological process of plant growth in regenerating selectively logged natural forest within the Wet Tropics (WTs) bioregion of Australia. This study used a rich historical data set to quantify tree growth within plots located at Danbulla National Park and State Forest on the Atherton Tableland. Leaf traits were collected from trees that have exhibited fast or slow growth over the last ~50 yr of measurement. Leaf traits were found to be poor predictors of tree growth for trees that have entered the canopy; however, for sub-canopy trees, leaf traits had a stronger association with growth rates. Leaf phosphorus concentrations were the strongest predictor of Periodic Annual Increment (PAI) for trees growing within the sub-canopy, with trees with higher leaf phosphorus levels showing a higher PAI. Sub-canopy tree leaves also exhibited stronger trade-offs between leaf traits and adhere to theoretical predictions more so than for canopy trees. We suggest that, in order for leaf traits to be more applicable to reforestation, size dependence of traits and growth relationships need to be more carefully considered, particularly when reforestation practitioners assign mean trait values to tropical tree species from multiple canopy strata. © 2018 by the Ecological Society of America.

The role of forest trees and their mycorrhizal fungi in carbonate rock weathering and its significance for global carbon cycling.

PubMed

Thorley, Rachel M S; Taylor, Lyla L; Banwart, Steve A; Leake, Jonathan R; Beerling, David J

2015-09-01

On million-year timescales, carbonate rock weathering exerts no net effect on atmospheric CO2 concentration. However, on timescales of decades-to-centuries, it can contribute to sequestration of anthropogenic CO2 and increase land-ocean alkalinity flux, counteracting ocean acidification. Historical evidence indicates this flux is sensitive to land use change, and recent experimental evidence suggests that trees and their associated soil microbial communities are major drivers of continental mineral weathering. Here, we review key physical and chemical mechanisms by which the symbiotic mycorrhizal fungi of forest tree roots potentially enhance carbonate rock weathering. Evidence from our ongoing field study at the UK's national pinetum confirms increased weathering of carbonate rocks by a wide range of gymnosperm and angiosperm tree species that form arbuscular (AM) or ectomycorrhizal (EM) fungal partnerships. We demonstrate that calcite-containing rock grains under EM tree species weather significantly faster than those under AM trees, an effect linked to greater soil acidification by EM trees. Weathering and corresponding alkalinity export are likely to increase with rising atmospheric CO2 and associated climate change. Our analyses suggest that strategic planting of fast-growing EM angiosperm taxa on calcite- and dolomite-rich terrain might accelerate the transient sink for atmospheric CO2 and slow rates of ocean acidification. © 2014 The Authors. Plant, Cell & Environment published by John Wiley & Sons Ltd.

Simple methods for raising tree and shrub seedlings in Afghanistan

Treesearch

R. Kasten Dumroese; Thomas D. Landis; Tara Luna; George Hernandez

2008-01-01

Growing trees and shrubs in nurseries is rewarding. You may wish to grow trees and shrubs for many reasons: 1) reforestation; 2) land stabilization; 3) fire wood (energy); 4) improving water quality; 5) urban landscapes; 6) providing shade; 7) producing fruits or nuts. If you enjoy growing plants, you are more likely to produce better trees and shrubs (Figure 1.1). In...

Simple methods for raising tree and shrub seedlings in Afghanistan [Dari version

Treesearch

R. Kasten Dumroese; Thomas D. Landis; Tara Luna; George Hernandez

2008-01-01

Growing trees and shrubs in nurseries is rewarding. You may wish to grow trees and shrubs for many reasons: 1) reforestation; 2) land stabilization; 3) fire wood (energy); 4) improving water quality; 5) urban landscapes; 6) providing shade; 7) producing fruits or nuts. If you enjoy growing plants, you are more likely to produce better trees and shrubs (Figure 1.1). In...

Phylogenetic affinity of tree shrews to Glires is attributed to fast evolution rate.

PubMed

Lin, Jiannan; Chen, Guangfeng; Gu, Liang; Shen, Yuefeng; Zheng, Meizhu; Zheng, Weisheng; Hu, Xinjie; Zhang, Xiaobai; Qiu, Yu; Liu, Xiaoqing; Jiang, Cizhong

2014-02-01

Previous phylogenetic analyses have led to incongruent evolutionary relationships between tree shrews and other suborders of Euarchontoglires. What caused the incongruence remains elusive. In this study, we identified 6845 orthologous genes between seventeen placental mammals. Tree shrews and Primates were monophyletic in the phylogenetic trees derived from the first or/and second codon positions whereas tree shrews and Glires formed a monophyly in the trees derived from the third or all codon positions. The same topology was obtained in the phylogeny inference using the slowly and fast evolving genes, respectively. This incongruence was likely attributed to the fast substitution rate in tree shrews and Glires. Notably, sequence GC content only was not informative to resolve the controversial phylogenetic relationships between tree shrews, Glires, and Primates. Finally, estimation in the confidence of the tree selection strongly supported the phylogenetic affiliation of tree shrews to Primates as a monophyly. Copyright © 2013 Elsevier Inc. All rights reserved.

Wood nitrogen concentrations in tropical trees: phylogenetic patterns and ecological correlates.

PubMed

Martin, Adam R; Erickson, David L; Kress, W John; Thomas, Sean C

2014-11-01

In tropical and temperate trees, wood chemical traits are hypothesized to covary with species' life-history strategy along a 'wood economics spectrum' (WES), but evidence supporting these expected patterns remains scarce. Due to its role in nutrient storage, we hypothesize that wood nitrogen (N) concentration will covary along the WES, being higher in slow-growing species with high wood density (WD), and lower in fast-growing species with low WD. In order to test this hypothesis we quantified wood N concentrations in 59 Panamanian hardwood species, and used this dataset to examine ecological correlates and phylogenetic patterns of wood N. Wood N varied > 14-fold among species between 0.04 and 0.59%; closely related species were more similar in wood N than expected by chance. Wood N was positively correlated with WD, and negatively correlated with log-transformed relative growth rates, although these relationships were relatively weak. We found evidence for co-evolution between wood N and both WD and log-transformed mortality rates. Our study provides evidence that wood N covaries with tree life-history parameters, and that these patterns consistently co-evolve in tropical hardwoods. These results provide some support for the hypothesized WES, and suggest that wood is an increasingly important N pool through tropical forest succession. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Realizing Mitigation Efficiency of European Commercial Forests by Climate Smart Forestry.

PubMed

Yousefpour, Rasoul; Augustynczik, Andrey Lessa Derci; Reyer, Christopher P O; Lasch-Born, Petra; Suckow, Felicitas; Hanewinkel, Marc

2018-01-10

European temperate and boreal forests sequester up to 12% of Europe's annual carbon emissions. Forest carbon density can be manipulated through management to maximize its climate mitigation potential, and fast-growing tree species may contribute the most to Climate Smart Forestry (CSF) compared to slow-growing hardwoods. This type of CSF takes into account not only forest resource potentials in sequestering carbon, but also the economic impact of regional forest products and discounts both variables over time. We used the process-based forest model 4 C to simulate European commercial forests' growth conditions and coupled it with an optimization algorithm to simulate the implementation of CSF for 18 European countries encompassing 68.3 million ha of forest (42.4% of total EU-28 forest area). We found a European CSF policy that could sequester 7.3-11.1 billion tons of carbon, projected to be worth 103 to 141 billion euros in the 21st century. An efficient CSF policy would allocate carbon sequestration to European countries with a lower wood price, lower labor costs, high harvest costs, or a mixture thereof to increase its economic efficiency. This policy prioritized the allocation of mitigation efforts to northern, eastern and central European countries and favored fast growing conifers Picea abies and Pinus sylvestris to broadleaves Fagus sylvatica and Quercus species.

"Growing trees backwards": Description of a stand reconstruction model (P-53)

Treesearch

Jonathan D. Bakker; Andrew J. Sanchez Meador; Peter Z. Fule; David W. Huffman; Margaret M. Moore

2008-01-01

We describe an individual-tree model that uses contemporary measurements to "grow trees backward" and reconstruct past tree diameters and stand structure in ponderosa pine dominated stands of the Southwest. Model inputs are contemporary structural measurements of all snags, logs, stumps, and living trees, and radial growth measurements, if available. Key...

"Growing trees backwards": Description of a stand reconstruction model

Treesearch

Jonathan D. Bakker; Andrew J. Sanchez Meador; Peter Z. Fule; David W. Huffman; Margaret M. Moore

2008-01-01

We describe an individual-tree model that uses contemporary measurements to "grow trees backward" and reconstruct past tree diameters and stand structure in ponderosa pine dominated stands of the Southwest. Model inputs are contemporary structural measurements of all snags, logs, stumps, and living trees, and radial growth measurements, if available. Key...

Wood properties and trunk allometry of co-occurring rainforest canopy trees in a cyclone-prone environment.

PubMed

Read, Jennifer; Evans, Robert; Sanson, Gordon D; Kerr, Stuart; Jaffré, Tanguy

2011-11-01

New Caledonia commonly experiences cyclones, so trees there are expected to have enhanced wood traits and trunk allometry that confer resistance to wind damage. We ask whether there is evidence of a trade-off between these traits and growth rate among species. Wood traits, including density, microfibril angle (MFA), and modulus of elasticity (MOE), ratio of tree height to stem diameter, and growth rate were investigated in mature trees of 15 co-occurring canopy species in a New Caledonian rainforest. In contrast to some studies, wood density did not correlate negatively with growth increment. Among angiosperms, wood density and MOE correlated positively with diameter-adjusted tree height, and MOE correlated positively with stem-diameter growth increment. Tall slender trees achieved high stiffness with high efficiency with respect to wood density, in part by low MFA, and with a higher diameter growth increment but a lower buckling safety factor. However, some tree species of a similar niche differed in whole-tree resistance to wind damage and achieved wood stiffness in different ways. There was no evidence of a growth-safety trade-off in these trees. In forests that regularly experience cyclones, there may be stronger selection for high wood density and/or stiffness in fast-growing trees of the upper canopy, with the potential growth trade-off amortized by access to the upper canopy and by other plant traits. Furthermore, decreasing wood density does not necessarily decrease resistance to wind damage, resistance being influenced by other characteristics including cell-level traits (e.g., MFA) and whole-plant architecture.

Flowering, die-back and recovery of a semelparous woody bamboo in the Atlantic Forest

NASA Astrophysics Data System (ADS)

Montti, Lía; Campanello, Paula I.; Goldstein, Guillermo

2011-07-01

Chusquea ramosissima is a semelparous woody bamboo growing in the understory of the semideciduous Atlantic Forest that increases in abundance after disturbance and consequently has profound effects on vegetation dynamics. Flowering and death of C. ramosissima may open a window of opportunity leaving space vacant for the recruitment of tree seedlings. We describe the flowering pattern and seedling demography of this species at different spatio-temporal scales between the years 2001 and 2009, and evaluate if tree seedling abundance of canopy species increased after the flowering event. At a landscape scale, flowering sites were interspersed with sites that did not flower. At a local scale, the flowering extended over 5 years, with flowering and non-flowering culms intermingled, also in small patches (i.e., 4 m 2). Seeds germinated soon after flowering and die-back. Four successive seedling cohorts were studied. Mortality rate was high during the first 4 months after seedling emergence but several fast-growing seedlings were able to become established successfully. At the end of the study, 10%-20% of the initial number of bamboo seedlings in each cohort survived. Seedling abundance of tree canopy species was similar in flowering and non-flowering sites. C. ramosissima was able to re-colonize and perpetuate in sites it previously occupied. The coexistence of flowering and non-flowering culms at different spatio-temporal scales and clonal growth by rhizomes, together with the successful bamboo seedlings establishment, enhanced bamboo persistence in gaps and disturbed sites. Flowering and death of C. ramosissima did not facilitate seedling growth of canopy tree species.

Climate change at northern latitudes: rising atmospheric humidity decreases transpiration, N-uptake and growth rate of hybrid aspen.

PubMed

Tullus, Arvo; Kupper, Priit; Sellin, Arne; Parts, Leopold; Sõber, Jaak; Tullus, Tea; Lõhmus, Krista; Sõber, Anu; Tullus, Hardi

2012-01-01

At northern latitudes a rise in atmospheric humidity and precipitation is predicted as a consequence of global climate change. We studied several growth and functional traits of hybrid aspen (Populus tremula L.×P. tremuloides Michx.) in response to elevated atmospheric humidity (on average 7% over the ambient level) in a free air experimental facility during three growing seasons (2008-2010) in Estonia, which represents northern temperate climate (boreo-nemoral zone). Data were collected from three humidified (H) and three control (C) plots, and analysed using nested linear models. Elevated air humidity significantly reduced height, stem diameter and stem volume increments and transpiration of the trees whereas these effects remained highly significant also after considering the side effects from soil-related confounders within the 2.7 ha study area. Tree leaves were smaller, lighter and had lower leaf mass per area (LMA) in H plots. The magnitude and significance of the humidity treatment effect--inhibition of above-ground growth rate--was more pronounced in larger trees. The lower growth rate in the humidified plots can be partly explained by a decrease in transpiration-driven mass flow of NO(3) (-) in soil, resulting in a significant reduction in the measured uptake of N to foliage in the H plots. The results suggest that the potential growth improvement of fast-growing trees like aspens, due to increasing temperature and atmospheric CO(2) concentration, might be smaller than expected at high latitudes if a rise in atmospheric humidity simultaneously takes place.

Climate Change at Northern Latitudes: Rising Atmospheric Humidity Decreases Transpiration, N-Uptake and Growth Rate of Hybrid Aspen

PubMed Central

Tullus, Arvo; Kupper, Priit; Sellin, Arne; Parts, Leopold; Sõber, Jaak; Tullus, Tea; Lõhmus, Krista; Sõber, Anu; Tullus, Hardi

2012-01-01

At northern latitudes a rise in atmospheric humidity and precipitation is predicted as a consequence of global climate change. We studied several growth and functional traits of hybrid aspen (Populus tremula L.×P. tremuloides Michx.) in response to elevated atmospheric humidity (on average 7% over the ambient level) in a free air experimental facility during three growing seasons (2008–2010) in Estonia, which represents northern temperate climate (boreo-nemoral zone). Data were collected from three humidified (H) and three control (C) plots, and analysed using nested linear models. Elevated air humidity significantly reduced height, stem diameter and stem volume increments and transpiration of the trees whereas these effects remained highly significant also after considering the side effects from soil-related confounders within the 2.7 ha study area. Tree leaves were smaller, lighter and had lower leaf mass per area (LMA) in H plots. The magnitude and significance of the humidity treatment effect – inhibition of above-ground growth rate – was more pronounced in larger trees. The lower growth rate in the humidified plots can be partly explained by a decrease in transpiration-driven mass flow of NO3 − in soil, resulting in a significant reduction in the measured uptake of N to foliage in the H plots. The results suggest that the potential growth improvement of fast-growing trees like aspens, due to increasing temperature and atmospheric CO2 concentration, might be smaller than expected at high latitudes if a rise in atmospheric humidity simultaneously takes place. PMID:22880067

In situ temperature response of photosynthesis of 42 tree and liana species in the canopy of two Panamanian lowland tropical forests with contrasting rainfall regimes.

PubMed

Slot, Martijn; Winter, Klaus

2017-05-01

Tropical forests contribute significantly to the global carbon cycle, but little is known about the temperature response of photosynthetic carbon uptake in tropical species, and how this varies within and across forests. We determined in situ photosynthetic temperature-response curves for upper canopy leaves of 42 tree and liana species from two tropical forests in Panama with contrasting rainfall regimes. On the basis of seedling studies, we hypothesized that species with high photosynthetic capacity - light-demanding, fast-growing species - would have a higher temperature optimum of photosynthesis (T Opt ) than species with low photosynthetic capacity - shade-tolerant, slow-growing species - and that, therefore, T Opt would scale with the position of a species on the slow-fast continuum of plant functional traits. T Opt was remarkably similar across species, regardless of their photosynthetic capacity and other plant functional traits. Community-average T Opt was almost identical to mean maximum daytime temperature, which was higher in the dry forest. Photosynthesis above T Opt appeared to be more strongly limited by stomatal conductance in the dry forest than in the wet forest. The observation that all species in a community shared similar T Opt values suggests that photosynthetic performance is optimized under current temperature regimes. These results should facilitate the scaling up of photosynthesis in relation to temperature from leaf to stand level in species-rich tropical forests. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Cellulose factories: advancing bioenergy production from forest trees.

PubMed

Mizrachi, Eshchar; Mansfield, Shawn D; Myburg, Alexander A

2012-04-01

Fast-growing, short-rotation forest trees, such as Populus and Eucalyptus, produce large amounts of cellulose-rich biomass that could be utilized for bioenergy and biopolymer production. Major obstacles need to be overcome before the deployment of these genera as energy crops, including the effective removal of lignin and the subsequent liberation of carbohydrate constituents from wood cell walls. However, significant opportunities exist to both select for and engineer the structure and interaction of cell wall biopolymers, which could afford a means to improve processing and product development. The molecular underpinnings and regulation of cell wall carbohydrate biosynthesis are rapidly being elucidated, and are providing tools to strategically develop and guide the targeted modification required to adapt forest trees for the emerging bioeconomy. Much insight has already been gained from the perturbation of individual genes and pathways, but it is not known to what extent the natural variation in the sequence and expression of these same genes underlies the inherent variation in wood properties of field-grown trees. The integration of data from next-generation genomic technologies applied in natural and experimental populations will enable a systems genetics approach to study cell wall carbohydrate production in trees, and should advance the development of future woody bioenergy and biopolymer crops.

Water relations and gas exchange in poplar and willow under water stress and elevated atmospheric CO2.

PubMed

Johnson, Jon D; Tognetti, Roberto; Paris, Piero

2002-05-01

Predictions of shifts in rainfall patterns as atmospheric [CO2] increases could impact the growth of fast growing trees such as Populus spp. and Salix spp. and the interaction between elevated CO2 and water stress in these species is unknown. The objectives of this study were to characterize the responses to elevated CO2 and water stress in these two species, and to determine if elevated CO2 mitigated drought stress effects. Gas exchange, water potential components, whole plant transpiration and growth response to soil drying and recovery were assessed in hybrid poplar (clone 53-246) and willow (Salix sagitta) rooted cuttings growing in either ambient (350 &mgr;mol mol-1) or elevated (700 &mgr;mol mol-1) atmospheric CO2 concentration ([CO2]). Predawn water potential decreased with increasing water stress while midday water potentials remained unchanged (isohydric response). Turgor potentials at both predawn and midday increased in elevated [CO2], indicative of osmotic adjustment. Gas exchange was reduced by water stress while elevated [CO2] increased photosynthetic rates, reduced leaf conductance and nearly doubled instantaneous transpiration efficiency in both species. Dark respiration decreased in elevated [CO2] and water stress reduced Rd in the trees growing in ambient [CO2]. Willow had 56% lower whole plant hydraulic conductivity than poplar, and showed a 14% increase in elevated [CO2] while poplar was unresponsive. The physiological responses exhibited by poplar and willow to elevated [CO2] and water stress, singly, suggest that these species respond like other tree species. The interaction of [CO2] and water stress suggests that elevated [CO2] did mitigate the effects of water stress in willow, but not in poplar.

Evaluation on community tree plantations as sustainable source for rural bioenergy in Indonesia

NASA Astrophysics Data System (ADS)

Siregar, U. J.; Narendra, B. H.; Suryana, J.; Siregar, C. A.; Weston, C.

2017-05-01

Indonesia has forest plantation resources in rural areas far from the national electricity grid that have potential as feedstock for biomass based electricity generation. Although some fast growing tree plantations have been established for bioenergy, their sustainability has not been evaluated to date. This research aimed to evaluate the growth of several tree species, cultivated by rural communities in Jawa Island, for their sustainability as a source for bio-electricity. For each tree species the biomass was calculated from diameter and height measurements and an estimate made for potential electricity generation based on density of available biomass and calorific content. Species evaluated included Acacia mangium, A. auriculiformis, A. crasicarpa, Anthocephalus cadamba, Calliandra calothirsus, Eucalyptus camaldulensis, Falcataria moluccana, Gmelina arborea, Leucaena leucochephala and Sesbania grandiflora. Among these species Falcataria moluccana and Anthocephalus cadamba showed the best potential for bioenergy production, with up to 133.7 and 67.1 ton/ha biomass respectively, from which 160412 and 80481 Kwh of electricity respectively could be generated. Plantations of these species could potentially meet the estimated demand for biomass feedstock to produce bioenergy in many rural villages, suggesting that community plantations could sustainably provide much needed electricity.

USE OF NATIVE PLANTS FOR REMEDIATION OF TRICHLOROETHYLENE: I. DECIDUOUS TREES.

PubMed

Strycharz, S; Newman, L

2009-02-01

Phytoremediation of trichloroethylene (TCE) can be accomplished using fast-growing, deep-rooting trees. The most commonly used tree for phytoremediation of TCE has been the hybrid poplar. This study looks at native southeastern trees of the United States as alternatives to the use of hybrid poplar. The use of native trees for phytoremediation allows for simultaneous restoration of contaminated sites. A 2-mo, greenhouse-based study was conducted to determine if sycamore (Plantanus L.), eastern cottonwood (Populus deltoides), sweetgum (Liquidambar styraciflua L.), and willow (Salix sachalinensis) trees possess the ability to degrade TCE by assessing TCE metabolite formation in the plant tissue. In addition to the metabolic capabilities of each tree species, growth parameters were measured including change in height, water usage, total fresh weight of each tissue type, and calculated total leaf surface area. Willow trees had the greatest increase in height among all trees tested; however, at higher concentrations TCE inhibits growth. Sycamore trees had the highest overall leaf surface area and total biomass, which correlated with sycamore trees also having the highest average water usage over the course of the experiment. Carbon tubes used to sample transpiration gases from sycamore, sweetgum, and cottonwood trees did not contain detectable levels of TCE. Tenex sample collection tubes used to sample willow trees during TCE exposure showed average TCE concentrations of up to 0.354 ng TCE cm -2 leaf tissue. All exposed trees contained TCE in the root, stem, and leaf tissues. The concentration of TCE remaining in tissues at the conclusion of the experiment varied, with the highest levels found in the roots and the lowest levels found in the leaves. Metabolites were also observed in different tissue types of all trees tested. The highest concentrations of trichloroacetic acid were observed in the leaves of the sycamore trees and cottonwood trees. Based on the growth parameters tested and the ability to metabolize TCE, sycamore and native cottonwood species are the best candidates for phytoremediation from this study.

Releasing young hardwood crop trees-use of a chain saw costs less than herbicides

Treesearch

Gary W. Miller; Gary W. Miller

1984-01-01

A crown-touching release of 12-year-old black cherry and yellow-poplar crop trees on a good site required removing an average of 14 trees for every crop tree. An average of 80 crop trees per acre was left free-to-grow with an average growing space of 4.7 feet on all sides of the crown. Basal spraying cost $0.80 per crop tree, stem injecting cost $0.61 per crop tree,...

Growth patterns of red pine on fine-textured soils.

Treesearch

David H. Alban; Donald H. Prettyman; Gary J. Brand

1987-01-01

Compares growth of 28- to 49-year-old red pine plantations on sandy and fine-textured soils. Red pine growing on these two contrasting soils did not differ in bole form, live crown ratio, or mortality, and tree growth predicted by models (STEMS and REDPINE) developed from trees growing on sandy soils worked equally well for trees growing on fine-textured soils.

Inferences from growing trees backwards

Treesearch

David W. Green; Kent A. McDonald

1997-01-01

The objective of this paper is to illustrate how longitudinal stress wave techniques can be useful in tracking the future quality of a growing tree. Monitoring the quality of selected trees in a plantation forest could provide early input to decisions on the effectiveness of management practices, or future utilization options, for trees in a plantation. There will...

A new tree classification system for southern hardwoods

Treesearch

James S. Meadows; Daniel A. Jr. Skojac

2008-01-01

A new tree classification system for southern hardwoods is described. The new system is based on the Putnam tree classification system, originally developed by Putnam et al., 1960, Management ond inventory of southern hardwoods, Agriculture Handbook 181, US For. Sew., Washington, DC, which consists of four tree classes: (1) preferred growing stock, (2) reserve growing...

Tree planting in Haiti: How to plant and care for your nursery grown seedlings

Treesearch

Kyrstan Hubbel; Yvonne Barkley; Jeremiah R. Pinto; R. Kasten Dumroese; Sabine Deristin; Raymond Joseph; Randy Brooks; Anthony S. Davis

2016-01-01

Seedlings need the right amounts of sunlight, water and nutrients to live and grow into healthy trees. Different types of trees have different requirements, so seedlings will need planting sites that meet all of their requirements. For example, pine trees need full sun, a moderate amount of water and a certain combination of nutrients to grow into healthy trees. If you...

Leaf Protein and Mineral Concentrations across the “Miracle Tree” Genus Moringa

PubMed Central

Sankaran, Renuka P.; Fahey, Jed W.; Grusak, Michael A.; Odee, David; Nouman, Wasif

2016-01-01

The moringa tree Moringa oleifera is a fast-growing, drought-resistant tree cultivated across the lowland dry tropics worldwide for its nutritious leaves. Despite its nutritious reputation, there has been no systematic survey of the variation in leaf nutritional quality across M. oleifera grown worldwide, or of the other species of the genus. To guide informed use of moringa, we surveyed protein, macro-, and micro- nutrients across 67 common garden samples of 12 Moringa taxa, including 23 samples of M. oleifera. Moringa oleifera, M. concanensis, M. stenopetala, an M. concanensis X oleifera hybrid, and M. longituba were highest in protein, with M. ruspoliana having the highest calcium levels. A protein-dry leaf mass tradeoff may preclude certain breeding possibilities, e.g. maximally high protein with large leaflets. These findings identify clear priorities and limitations for improved moringa varieties with traits such as high protein, calcium, or ease of preparation. PMID:27459315

Meta-transcriptomics indicates biotic cross-tolerance in willow trees cultivated on petroleum hydrocarbon contaminated soil.

PubMed

Gonzalez, Emmanuel; Brereton, Nicholas J B; Marleau, Julie; Guidi Nissim, Werther; Labrecque, Michel; Pitre, Frederic E; Joly, Simon

2015-10-12

High concentrations of petroleum hydrocarbon (PHC) pollution can be hazardous to human health and leave soils incapable of supporting agricultural crops. A cheap solution, which can help restore biodiversity and bring land back to productivity, is cultivation of high biomass yielding willow trees. However, the genetic mechanisms which allow these fast-growing trees to tolerate PHCs are as yet unclear. Salix purpurea 'Fish Creek' trees were pot-grown in soil from a former petroleum refinery, either lacking or enriched with C10-C50 PHCs. De novo assembled transcriptomes were compared between tree organs and impartially annotated without a priori constraint to any organism. Over 45% of differentially expressed genes originated from foreign organisms, the majority from the two-spotted spidermite, Tetranychus urticae. Over 99% of T. urticae transcripts were differentially expressed with greater abundance in non-contaminated trees. Plant transcripts involved in the polypropanoid pathway, including phenylalanine ammonia-lyase (PAL), had greater expression in contaminated trees whereas most resistance genes showed higher expression in non-contaminated trees. The impartial approach to annotation of the de novo transcriptomes, allowing for the possibility for multiple species identification, was essential for interpretation of the crop's response treatment. The meta-transcriptomic pattern of expression suggests a cross-tolerance mechanism whereby abiotic stress resistance systems provide improved biotic resistance. These findings highlight a valuable but complex biotic and abiotic stress response to real-world, multidimensional contamination which could, in part, help explain why crops such as willow can produce uniquely high biomass yields on challenging marginal land.

A Sampling Based Approach to Spacecraft Autonomous Maneuvering with Safety Specifications

NASA Technical Reports Server (NTRS)

Starek, Joseph A.; Barbee, Brent W.; Pavone, Marco

2015-01-01

This paper presents a methods for safe spacecraft autonomous maneuvering that leverages robotic motion-planning techniques to spacecraft control. Specifically the scenario we consider is an in-plan rendezvous of a chaser spacecraft in proximity to a target spacecraft at the origin of the Clohessy Wiltshire Hill frame. The trajectory for the chaser spacecraft is generated in a receding horizon fashion by executing a sampling based robotic motion planning algorithm name Fast Marching Trees (FMT) which efficiently grows a tree of trajectories over a set of probabillistically drawn samples in the state space. To enforce safety the tree is only grown over actively safe samples for which there exists a one-burn collision avoidance maneuver that circularizes the spacecraft orbit along a collision-free coasting arc and that can be executed under potential thrusters failures. The overall approach establishes a provably correct framework for the systematic encoding of safety specifications into the spacecraft trajectory generations process and appears amenable to real time implementation on orbit. Simulation results are presented for a two-fault tolerant spacecraft during autonomous approach to a single client in Low Earth Orbit.

Tree growth prediction using size and exposed crown area

Treesearch

Peter H. Wyckoff; James S. Clark

2005-01-01

We address the relationships between tree growth rate and growing environment for 21 co-occurring species. Tree growth rates are obtained from mapped plots at the Coweeta Long-Term Ecological Research site in the southern Appalachian Mountains. We employ high-resolution aerial photography to assess the light environment for trees growing in these plots, using exposed...

Coppicing to convert small cull trees to growing stock

Treesearch

Gerald A. Walters

1972-01-01

Several tree species are now being planted in Hawaii to reforest areas on which firetree (Myrica faya Ait.)-a plant pest of little commercial value-has been killed. The potential of converting cull trees of five ofthe replacement species into growing stock trees by coppicing was evaluated. Australian toon and tropical ash showed the greatest...

Long-term impacts of selective logging on two Amazonian tree species with contrasting ecological and reproductive characteristics: inferences from Eco-gene model simulations.

PubMed

Vinson, C C; Kanashiro, M; Sebbenn, A M; Williams, T C R; Harris, S A; Boshier, D H

2015-08-01

The impact of logging and subsequent recovery after logging is predicted to vary depending on specific life history traits of the logged species. The Eco-gene simulation model was used to evaluate the long-term impacts of selective logging over 300 years on two contrasting Brazilian Amazon tree species, Dipteryx odorata and Jacaranda copaia. D. odorata (Leguminosae), a slow growing climax tree, occurs at very low densities, whereas J. copaia (Bignoniaceae) is a fast growing pioneer tree that occurs at high densities. Microsatellite multilocus genotypes of the pre-logging populations were used as data inputs for the Eco-gene model and post-logging genetic data was used to verify the output from the simulations. Overall, under current Brazilian forest management regulations, there were neither short nor long-term impacts on J. copaia. By contrast, D. odorata cannot be sustainably logged under current regulations, a sustainable scenario was achieved by increasing the minimum cutting diameter at breast height from 50 to 100 cm over 30-year logging cycles. Genetic parameters were only slightly affected by selective logging, with reductions in the numbers of alleles and single genotypes. In the short term, the loss of alleles seen in J. copaia simulations was the same as in real data, whereas fewer alleles were lost in D. odorata simulations than in the field. The different impacts and periods of recovery for each species support the idea that ecological and genetic information are essential at species, ecological guild or reproductive group levels to help derive sustainable management scenarios for tropical forests.

Long-term impacts of selective logging on two Amazonian tree species with contrasting ecological and reproductive characteristics: inferences from Eco-gene model simulations

PubMed Central

Vinson, C C; Kanashiro, M; Sebbenn, A M; Williams, T CR; Harris, S A; Boshier, D H

2015-01-01

The impact of logging and subsequent recovery after logging is predicted to vary depending on specific life history traits of the logged species. The Eco-gene simulation model was used to evaluate the long-term impacts of selective logging over 300 years on two contrasting Brazilian Amazon tree species, Dipteryx odorata and Jacaranda copaia. D. odorata (Leguminosae), a slow growing climax tree, occurs at very low densities, whereas J. copaia (Bignoniaceae) is a fast growing pioneer tree that occurs at high densities. Microsatellite multilocus genotypes of the pre-logging populations were used as data inputs for the Eco-gene model and post-logging genetic data was used to verify the output from the simulations. Overall, under current Brazilian forest management regulations, there were neither short nor long-term impacts on J. copaia. By contrast, D. odorata cannot be sustainably logged under current regulations, a sustainable scenario was achieved by increasing the minimum cutting diameter at breast height from 50 to 100 cm over 30-year logging cycles. Genetic parameters were only slightly affected by selective logging, with reductions in the numbers of alleles and single genotypes. In the short term, the loss of alleles seen in J. copaia simulations was the same as in real data, whereas fewer alleles were lost in D. odorata simulations than in the field. The different impacts and periods of recovery for each species support the idea that ecological and genetic information are essential at species, ecological guild or reproductive group levels to help derive sustainable management scenarios for tropical forests. PMID:24424164

The limits to tree height.

PubMed

Koch, George W; Sillett, Stephen C; Jennings, Gregory M; Davis, Stephen D

2004-04-22

Trees grow tall where resources are abundant, stresses are minor, and competition for light places a premium on height growth. The height to which trees can grow and the biophysical determinants of maximum height are poorly understood. Some models predict heights of up to 120 m in the absence of mechanical damage, but there are historical accounts of taller trees. Current hypotheses of height limitation focus on increasing water transport constraints in taller trees and the resulting reductions in leaf photosynthesis. We studied redwoods (Sequoia sempervirens), including the tallest known tree on Earth (112.7 m), in wet temperate forests of northern California. Our regression analyses of height gradients in leaf functional characteristics estimate a maximum tree height of 122-130 m barring mechanical damage, similar to the tallest recorded trees of the past. As trees grow taller, increasing leaf water stress due to gravity and path length resistance may ultimately limit leaf expansion and photosynthesis for further height growth, even with ample soil moisture.

Fertilizer applications for container-grown ornamental tree production

USDA-ARS?s Scientific Manuscript database

Knowledge of better utilization of nutrients during the growing season is needed to produce marketable container-grown ornamental shade trees economically. Fertilizer practices to grow Acer rubrum ‘Red Sunset’ trees in two separate fields (each containing four plots) irrigated with either city or po...

Relation of Stem Diameter, Branch Basal Area, and Leaf Biomass in Rapidly Growing Loblolly Pine

Treesearch

Thomas M. Williams; Charles A. Gresham

2004-01-01

Twenty loblolly pines, growing in International Paper’s maximum growth experiment at Bainbridge GA, were destructively sampled at the end of the sixth growing season. Ten trees in the control and 10 in the maximum treatment were sampled. All trees were planted at a 2.4- by 3.6-m spacing and grown with complete competition control. The maximum trees also received...

A Maze Game on Android Using Growing Tree Method

NASA Astrophysics Data System (ADS)

Hendrawan, Y. F.

2018-01-01

A maze is a type of puzzle games where a player moves in complex and branched passages to find a particular target or location. One method to create a maze is the Growing Tree method. The method creates a tree that has branches which are the paths of a maze. This research explored three types of Growing Tree method implementations for maze generation on Android mobile devices. The layouts produced could be played in first and third-person perspectives. The experiment results showed that it took 17.3 seconds on average to generate 20 cells x 20 cells dynamic maze layouts.

Estimation of oxygen isotope in source water of tree-ring cellulose in Indonesia using tree-ring oxygen isotope model

NASA Astrophysics Data System (ADS)

Hisamochi, R.; Watanabe, Y.; Kurita, N.; Sano, M.; Nakatsuka, T.; Matsuo, M.; Yamamoto, H.; Sugiyama, J.; Tsuda, T.; Tagami, T.

2016-12-01

Oxygen isotope composition (δ18O) of tree-ring cellulose has been used as paleoclimate proxy because its origin is atmospheric precipitation. However, interpretation of tree-ring cellulose δ18O is not simple because source water of tree-ring cellulose (the water took up by tree) is not atmospheric precipitation but soil water or ground water in growing season, precisely. In this study, we investigate the relationship between source water of tree-ring cellulose and precipitation in order to improve interpretation of tree-ring cellulose δ18O as paleoclimate proxy. We collected ten teak (Tectona grandis) plantation samples in Java Island, Indonesia. Teak is deciduous tree and grows in rainy season. Samples were cut into annual rings after cellulose extraction. δ18O of individual rings were measured by TCEA-IRMS at the Research Institute of Humanity and Nature. We calculatedδ18O of source water by means of tree-ring oxygen isotope model and then comparedδ18O of source water and that of monthly atmospheric precipitation at Jakarta (GNIP; Global Network of isotopes in Precipitation). Source waterδ18O shows two types of significant correlation withδ18O in atmospheric precipitation. One is positive correlation withδ18O of atmospheric precipitation in previous rainy season. Another is negative correlation with δ18O of atmospheric precipitation in beginning of the growing season. The former indicates that soil water in growing season contains rainfall in previous rainy season and teak mainly takes it up. The latter is difficult to interpret. It may be related to soil moisutre in beginning of growing season.

Fast Marching Tree: a Fast Marching Sampling-Based Method for Optimal Motion Planning in Many Dimensions*

PubMed Central

Janson, Lucas; Schmerling, Edward; Clark, Ashley; Pavone, Marco

2015-01-01

In this paper we present a novel probabilistic sampling-based motion planning algorithm called the Fast Marching Tree algorithm (FMT*). The algorithm is specifically aimed at solving complex motion planning problems in high-dimensional configuration spaces. This algorithm is proven to be asymptotically optimal and is shown to converge to an optimal solution faster than its state-of-the-art counterparts, chiefly PRM* and RRT*. The FMT* algorithm performs a “lazy” dynamic programming recursion on a predetermined number of probabilistically-drawn samples to grow a tree of paths, which moves steadily outward in cost-to-arrive space. As such, this algorithm combines features of both single-query algorithms (chiefly RRT) and multiple-query algorithms (chiefly PRM), and is reminiscent of the Fast Marching Method for the solution of Eikonal equations. As a departure from previous analysis approaches that are based on the notion of almost sure convergence, the FMT* algorithm is analyzed under the notion of convergence in probability: the extra mathematical flexibility of this approach allows for convergence rate bounds—the first in the field of optimal sampling-based motion planning. Specifically, for a certain selection of tuning parameters and configuration spaces, we obtain a convergence rate bound of order O(n−1/d+ρ), where n is the number of sampled points, d is the dimension of the configuration space, and ρ is an arbitrarily small constant. We go on to demonstrate asymptotic optimality for a number of variations on FMT*, namely when the configuration space is sampled non-uniformly, when the cost is not arc length, and when connections are made based on the number of nearest neighbors instead of a fixed connection radius. Numerical experiments over a range of dimensions and obstacle configurations confirm our the-oretical and heuristic arguments by showing that FMT*, for a given execution time, returns substantially better solutions than either PRM* or RRT*, especially in high-dimensional configuration spaces and in scenarios where collision-checking is expensive. PMID:27003958

Water relations and photosynthetic performance in Larix sibirica growing in the forest-steppe ecotone of northern Mongolia.

PubMed

Dulamsuren, Choimaa; Hauck, Markus; Bader, Martin; Osokhjargal, Dalaikhuu; Oyungerel, Shagjjav; Nyambayar, Suran; Runge, Michael; Leuschner, Christoph

2009-01-01

Shoot water relations were studied in Siberian larch (Larix sibirica Ledeb.) trees growing at the borderline between taiga and steppe in northern Mongolia. Larix sibirica is the main tree species in these forests covering 80% of Mongolia's forested area. Minimum shoot water potentials (Psi(m)) close to the point of zero turgor (Psi(0)) repeatedly recorded throughout the growing season suggest that the water relations in L. sibirica were often critical. The Psi(m) varied in close relation to the atmospheric vapor pressure deficit, whereas Psi(0) was correlated with monthly precipitation. Young larch trees growing at the forest line to the steppe were more susceptible to drought than mature trees at the same sites. Furthermore, isolated trees growing on the steppe exhibited lower Psi(m) and recovered to a lower degree from drought overnight than the trees at the forest line. Indications of drought stress in L. sibirica were obtained in two study areas in Mongolia's forest-steppe ecotone: one in the mountain taiga of the western Khentey in northernmost Mongolia, the other in the forest-steppe at the southern distribution limit of L. sibirica on Mt. Bogd Uul, southern Khentey. Larix sibirica growing in riverine taiga with contact to the groundwater table was better water-supplied than the larch trees growing at the forest line to the steppe. Larch trees from the interior of light taiga forests on north-facing slopes, however, exhibited more critical water relations than the trees at the forest line. Frequent drought stress in mature trees and even more in young larch trees at the forest-steppe borderline suggests that L. sibirica does not have the potential to encroach on the steppe under the present climate, except in a sequence of exceptionally moist and cool years. A regression of the present borderline between forest and steppe is likely to occur, as average temperatures are increasing everywhere and precipitation is decreasing regionally in Mongolia's taiga forest region. Higher stomatal conductance concomitant to lower Psi(m) in trees of northern-slope forests compared to trees from the forest line to the steppe may be the result of a recent increase in drought intensity that affects better drought-adapted trees at the forest edge less than the trees in the forest interior. We conclude that drought is a key factor explaining the forest-steppe borderline in northern Mongolia. The proportion of forests within the present vegetation pattern of forests on north-facing slopes and the grasslands on south-facing slopes in Mongolia's forest-steppe ecotone is not likely to increase under the present climate, but may decrease with increasing aridity due to global warming.

Learning accurate very fast decision trees from uncertain data streams

NASA Astrophysics Data System (ADS)

Liang, Chunquan; Zhang, Yang; Shi, Peng; Hu, Zhengguo

2015-12-01

Most existing works on data stream classification assume the streaming data is precise and definite. Such assumption, however, does not always hold in practice, since data uncertainty is ubiquitous in data stream applications due to imprecise measurement, missing values, privacy protection, etc. The goal of this paper is to learn accurate decision tree models from uncertain data streams for classification analysis. On the basis of very fast decision tree (VFDT) algorithms, we proposed an algorithm for constructing an uncertain VFDT tree with classifiers at tree leaves (uVFDTc). The uVFDTc algorithm can exploit uncertain information effectively and efficiently in both the learning and the classification phases. In the learning phase, it uses Hoeffding bound theory to learn from uncertain data streams and yield fast and reasonable decision trees. In the classification phase, at tree leaves it uses uncertain naive Bayes (UNB) classifiers to improve the classification performance. Experimental results on both synthetic and real-life datasets demonstrate the strong ability of uVFDTc to classify uncertain data streams. The use of UNB at tree leaves has improved the performance of uVFDTc, especially the any-time property, the benefit of exploiting uncertain information, and the robustness against uncertainty.

Introduction to forest growth and yield

Treesearch

John W., Jr. Moser

1989-01-01

Forests are dynamic communities that are constantly changing. To the casual observer, only the most obvious change, such as the death of a tree, may be discernible. However, other changes are continually occurring. Trees grow in both height and diameter. This is termed survivor growth. Ingrowth occurs when a tree's diameter grows larger than an arbitrarily...

Lead transport into Bayou Trepagnier wetlands in Louisiana, USA.

PubMed

Devall, Margaret S; Thien, Leonard B; Ellgaard, Erik; Flowers, George

2006-01-01

Establishment of a petroleum refinery in 1916 near the headwaters of Bayou Trepagnier with subsequent dredging of the bayou resulted in spoil banks containing high levels of Pb. A large swamp abuts the eastern bank of the bayou. Cores were taken from 15 baldcypress [Taxodium distichum (L.) Richard] trees growing in the swamp along a 610-m transect (nine trees) and a 183-m transect (six trees) running perpendicular from the spoil bank. The cores were crossdated, annual rings were measured, and 5-yr segments of the cores were prepared and analyzed for heavy metals. Soil samples were collected along one transect and analyzed for metals. Levels of Pb in Bayou Trepagnier swamp trees were compared to levels in nine baldcypress trees growing along Stinking Bayou, a reference area. During the last 100 yr, Pb in growth rings of swamp baldcypress trees averaged 8.6 mg/kg (SD 4.88) along one transect and 7.9 mg/kg (SD 5.39) along the other. Lead in the soil along the first transect dropped from >2700 mg/kg (spoil bank) to 10 mg/kg at 420 m into the swamp. Baldcypress trees growing near the refinery on the spoil bank along Bayou Trepagnier (covered in an earlier study) averaged 4.5 mg/kg Pb, and trees along Stinking Bayou averaged 2.1 mg/kg. Trees in the swamp soil with 10 to 425 mg/kg Pb concentrated much more Pb than trees growing on the heavily polluted bank. Greater uptake of Pb by trees in the swamp is discussed in terms of soil dynamics and Pb sources.

Modeling the relationships among internal defect features and external Appalachian hardwood log defect indicators

Treesearch

R. Edward Thomas

2009-01-01

As a hardwood tree grows and develops, surface defects such as branch stubs and wounds are overgrown. Evidence of these defects remain on the log surface for decades and in many instances for the life of the tree. As the tree grows the defect is encapsulated or grown over by new wood. During this process the appearance of the defect in the tree's bark changes. The...

Grow--a computer subroutine that projects the growth of trees in the Lake States' forests.

Treesearch

Gary J. Brand

1981-01-01

A computer subroutine, Grow, has been written in 1977 Standard FORTRAN to implement a distance-independent, individual tree growth model for Lake States' forests. Grow is a small and easy-to-use version of the growth model. All the user has to do is write a calling program to read initial conditions, call Grow, and summarize the results.

Tree rings and the local environment

Treesearch

Kevin T. Smith

2011-01-01

The amount of wood produced by a tree each year depends on tree condition, genetic programming, and growing conditions. Wood is mature xylem, the result of inward cell divisions by the vascular cambium, the new cell generator located between the wood and the inner bark (phloem). In temperate climatic zones, where a spring and summer growing season alternates with...

Fast demographic traits promote high diversification rates of Amazonian trees

PubMed Central

Baker, Timothy R; Pennington, R Toby; Magallon, Susana; Gloor, Emanuel; Laurance, William F; Alexiades, Miguel; Alvarez, Esteban; Araujo, Alejandro; Arets, Eric J M M; Aymard, Gerardo; de Oliveira, Atila Alves; Amaral, Iêda; Arroyo, Luzmila; Bonal, Damien; Brienen, Roel J W; Chave, Jerome; Dexter, Kyle G; Di Fiore, Anthony; Eler, Eduardo; Feldpausch, Ted R; Ferreira, Leandro; Lopez-Gonzalez, Gabriela; van der Heijden, Geertje; Higuchi, Niro; Honorio, Eurídice; Huamantupa, Isau; Killeen, Tim J; Laurance, Susan; Leaño, Claudio; Lewis, Simon L; Malhi, Yadvinder; Marimon, Beatriz Schwantes; Marimon Junior, Ben Hur; Monteagudo Mendoza, Abel; Neill, David; Peñuela-Mora, Maria Cristina; Pitman, Nigel; Prieto, Adriana; Quesada, Carlos A; Ramírez, Fredy; Ramírez Angulo, Hirma; Rudas, Agustin; Ruschel, Ademir R; Salomão, Rafael P; de Andrade, Ana Segalin; Silva, J Natalino M; Silveira, Marcos; Simon, Marcelo F; Spironello, Wilson; ter Steege, Hans; Terborgh, John; Toledo, Marisol; Torres-Lezama, Armando; Vasquez, Rodolfo; Vieira, Ima Célia Guimarães; Vilanova, Emilio; Vos, Vincent A; Phillips, Oliver L; Wiens, John

2014-01-01

The Amazon rain forest sustains the world's highest tree diversity, but it remains unclear why some clades of trees are hyperdiverse, whereas others are not. Using dated phylogenies, estimates of current species richness and trait and demographic data from a large network of forest plots, we show that fast demographic traits – short turnover times – are associated with high diversification rates across 51 clades of canopy trees. This relationship is robust to assuming that diversification rates are either constant or decline over time, and occurs in a wide range of Neotropical tree lineages. This finding reveals the crucial role of intrinsic, ecological variation among clades for understanding the origin of the remarkable diversity of Amazonian trees and forests. PMID:24589190

[Factors influencing tree radial growth of three common species in broad-leaved Korean pine mixed forests in Changbai Mountains, China].

PubMed

Cai, Li Rong; Kuang, Xu; Fang, Shuai; Yuan, Zuo Qiang; Lin, Fei; Ye, Ji; Hao, Zhan Qing; Wang, Xu Gao

2017-05-18

To understand the factors influencing tree radial growth, we analyzed the seasonal dynamics of tree growth of 3 common species (Pinus koraiensis, Tilia amurensis, Quercus mongolica), compared interspecific growth rates and explored the effects of size, neighborhood competition, soil and topography based on five years dendrometer bands monitoring data of the 3 common species in a broad-leaved Korean pine (P. koraiensis) mixed forest plot in Changbai Mountain, Northeast China. The results showed that the growth dynamics of 3 species were consistent. Trees began to grow in late May, thrived in July, grew at declining rates from late August and stopped growing in late October. Annual relative growth rates were significantly different among the species. Q. mongolica tended to grow faster than the other two species, and the differences of growth rates among the 3 species were especially large for small and medium trees. Tree growth rates of P. koraiensis and Q. mongolica were strongly decreased by neighborhood competition, while tree growth rate of T. amurensis was significantly related to tree size, soil and topography.

[sup 13]C and [sup 18]O of wood from the Roman siege rampart in Masada, Israel (AD 70-73): Evidence for a less arid climate for the region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yakir, D.; Gat, J.; Issar, A.

1994-08-01

The isotopic ratios [sup 13]C/[sup 12]C and [sup 18]O/[sup 16]O of cellulose from tamarix trees which were used by the Roman army as a groundwork of the siege-rampart of Masada (AD 70-73) were compared with ratios measured in present-day tamarix trees growing in the Masada region and in central Israel. The ancient tamarix cellulose is depleted in both [sup 13]C and [sup 18]O compared to cellulose from trees growing in the Masada region today. Similar trends were observed on comparing modern tamarix trees growing in the Negev Desert with those growing in the temperate climate of central Israel. Considering themore » factors that can contribute to the observed changes in isotopic composition, the authors conclude that the ancient trees enjoyed less arid environmental conditions during their growth compared to contemporary trees in this desert region. This report demonstrates the potential in using combined [sup 18]O and [sup 13]C analyses of archeological plant material as independent indication of regional climate change in desert areas (where conventional isotopic analyses, such as in tree rings, are impractical).« less

Growth and yield of western larch: 15-year results of a levels-of-growing-stock study.

Treesearch

K.W. Seidel

1982-01-01

The 15-year growth response from a levels-of-growing-stock study in an even-aged western larch (Larix occidentalis Nutt.) stand in northeastern Oregon, first thinned at age 33, showed that trees growing at lower stand densities grew more rapidly in diameter but did not grow faster in height than trees in high density plots. Both basal area and...

Can nitrogen fertilization aid restoration of mature tree productivity in degraded dryland riverine ecosystems?

USGS Publications Warehouse

Andersen, Douglas C.; Adair, Elizabeth Carol; Nelson, Sigfrid Mark; Binkley, Dan

2014-01-01

Restoration of riparian forest productivity lost as a consequence of flow regulation is a common management goal in dryland riverine ecosystems. In the northern hemisphere, dryland river floodplain trees often include one or another species of Populus, which are fast-growing, nutrient-demanding trees. Because the trees are phreatophytic in drylands, and have water needs met in whole or in part by a shallow water table, their productivity may be limited by nitrogen (N) availability, which commonly limits primary productivity in mesic environments. We added 20 g N m−2 in a 2-m radius around the base of mature Populus fremontii along each of a regulated and free-flowing river in semiarid northwest Colorado, USA (total n = 42) in order to test whether growth is constrained by low soil N. Twelve years after fertilization, we collected increment cores from these and matched unfertilized trees and compared radial growth ratios (growth in the 3-year post-fertilization period/growth in the 3-year pre-fertilization period) in paired t tests. We expected a higher mean ratio in the fertilized trees. No effect from fertilization was detected, nor was a trend evident on either river. An alternative test using analysis of covariance (ANCOVA) produced a similar result. Our results underscore the need for additional assessment of which and to what extent factors other than water control dryland riverine productivity. Positive confirmation of adequate soil nutrients at these and other dryland riparian sites would bolster the argument that flow management is necessary and sufficient to maximize productivity and enhance resilience in affected desert riverine forests.

PhySortR: a fast, flexible tool for sorting phylogenetic trees in R.

PubMed

Stephens, Timothy G; Bhattacharya, Debashish; Ragan, Mark A; Chan, Cheong Xin

2016-01-01

A frequent bottleneck in interpreting phylogenomic output is the need to screen often thousands of trees for features of interest, particularly robust clades of specific taxa, as evidence of monophyletic relationship and/or reticulated evolution. Here we present PhySortR, a fast, flexible R package for classifying phylogenetic trees. Unlike existing utilities, PhySortR allows for identification of both exclusive and non-exclusive clades uniting the target taxa based on tip labels (i.e., leaves) on a tree, with customisable options to assess clades within the context of the whole tree. Using simulated and empirical datasets, we demonstrate the potential and scalability of PhySortR in analysis of thousands of phylogenetic trees without a priori assumption of tree-rooting, and in yielding readily interpretable trees that unambiguously satisfy the query. PhySortR is a command-line tool that is freely available and easily automatable.

The abundance and diversity of legume-nodulating rhizobia in 28-year-old plantations of tropical, subtropical, and exotic tree species: a case study from the Forest Reserve of Bandia, Senegal.

PubMed

Sene, Godar; Thiao, Mansour; Samba-Mbaye, Ramatoulaye; Khasa, Damase; Kane, Aboubacry; Mbaye, Mame Samba; Beaulieu, Marie-Ève; Manga, Anicet; Sylla, Samba Ndao

2013-01-01

Several fast-growing and multipurpose tree species have been widely used in West Africa to both reverse the tendency of land degradation and restore soil productivity. Although beneficial effects have been reported on soil stabilization, there still remains a lack of information about their impact on soil microorganisms. Our investigation has been carried out in exotic and native tree plantations of 28 years and aimed to survey and compare the abundance and genetic diversity of natural legume-nodulating rhizobia (LNR). The study of LNR is supported by the phylogenetic analysis which clustered the isolates into three genera: Bradyrhizobium, Mesorhizobium, and Sinorhizobium. The results showed close positive correlations between the sizes of LNR populations estimated both in the dry and rainy seasons and the presence of legume tree hosts. There were significant increases in Rhizobium spp. population densities in response to planting with Acacia spp., and high genetic diversities and richness of genotypes were fittest in these tree plantations. This suggests that enrichment of soil Rhizobium spp. populations is host specific. The results indicated also that species of genera Mesorhizobium and Sinorhizobium were lacking in plantations of non-host species. By contrast, there was a widespread distribution of Bradyrhizobium spp. strains across the tree plantations, with no evident specialization in regard to plantation type. Finally, the study provides information about the LNR communities associated with a range of old tree plantations and some aspects of their relationships to soil factors, which may facilitate the management of man-made forest systems that target ecosystem rehabilitation and preservation of soil biota.

The Germination of Several Tree Species in Plastic Greenhouses

Treesearch

Howard M. Phipps

1969-01-01

The technique of growing tree seedlings in plastic greenhouses is being evaluated for red pine, jack pine, white spruce, and yellow birch at the Chittenden Nursery in northern Lower Michigan. Both a long growing season and a normal-length growing season in plastic greenhouses were compared with standard outdoor nursery beds (control). First-year results showed that...

Water withdrawal in deep soil layers: a key strategy to cope with drought in tropical eucalypt plantations

NASA Astrophysics Data System (ADS)

Christina, M.; Laclau, J.; Nouvellon, Y.; Duursma, R. A.; Stape, J. L.; Lambais, G. R.; Le Maire, G.

2013-12-01

Little is known about the role of very deep roots to supply the water requirements of tropical forests. Clonal Eucalyptus plantations managed in short rotation on very deep Ferralsols are simple forest ecosystems (only 1 plant genotype growing on a relatively homogeneous soil) likely to provide an insight into tree water use strategies in tropical forests. Fine roots have been observed down to a depth of 6 m at age 1 year in Brazilian eucalypt plantations. However, the contribution of water stored in very deep soil layers to stand evapotranspiration over tree growth has been poorly quantified. An eco-physiological model, MAESPA, has been used to simulate half-hourly stand water balance over the first three years of growth in a clonal Eucalyptus grandis plantation in southern Brazil (Eucflux project, State of São Paulo). The water balance model in MAESPA is an equilibrium-type model between soil and leaf water potentials for individual trees aboveground, and at the stand scale belowground. The dynamics of the vertical fine root distribution have been taken into account empirically from linear interpolations between successive measurements. The simulations were compared to time series of soil water contents measured every meter down to 10m deep and to daily latent heat fluxes measured by eddy covariance. Simulations of volumetric soil water contents matched satisfactorily with measurements (RMSE = 0.01) over the three-year period. Good agreement was also observed between simulated and measured latent heat fluxes. In the rainy season, more than 75 % of tree transpiration was supplied by water withdrawn in the upper 1 m of soil, but water uptake progressed to deeper soil layers during dry periods, down to a depth of 6 m, 12 m and 15 m the first, second and third year after planting, respectively. During the second growing season, 15% of water was withdrawn below a depth of 6 m, and 5% below 10m. Most of the soil down to 12m deep was dried out the second year after planting and deep drainage was negligible after 2 years. As a consequence, during the third year after planting only 4% of water was taken up below 6m. However, during the dry season, this deep water still supplied 50% of water requirements. Our results show that deep fine roots of E. grandis play a major role in supplying tree water requirements during extended dry periods. Large amounts of water are stored in the whole soil profile after clear cutting and the fast exploration of deep soil layers by roots make it available for tree growth. After canopy closure, precipitation becomes the key limitation for the productivity of these plantations grown in deep sandy soils. Our results suggest that a territorial strategy leading to a fast exploration of very deep soil layers might provide a strong competitive advantage in regions prone to drought.

The Building Blocks of Life Move from Ground to Tree to Animal and Back to Ground

NASA Astrophysics Data System (ADS)

Davidson, E. A.

2015-12-01

I generally use combinations of big words to describe my science, such as biogeochemistry, ecosystem ecology, nutrient cycling, stoichiometry, tropical deforestation, land-use change, agricultural intensification, eutrophication, greenhouse gas emissions, and sustainable development. I didn't expect to use any of these words, but I was surprised that I couldn't use some others that seem simple enough to me, such as farm, plant, soil, and forest. I landed on "building blocks" as my metaphor for the forms of carbon, nitrogen, phosphorus, and other elements that I study as they cycle through and among ecosystems. I study what makes trees and other kinds of life grow. We all know that they need the sun and that they take up water from the ground, but what else do trees need from the ground? What do animals that eat leaves and wood get from the trees? Just as we need building blocks to grow our bodies, trees and animals also need building blocks for growing their bodies. Trees get part of their building blocks from the ground and animals get theirs from what they eat. When animals poop and when leaves fall, some of their building blocks return to the ground. When they die, their building blocks also go back to the ground. I also study what happens to the ground, the water, and the air when we cut down trees, kill or shoo away the animals, and make fields to grow our food. Can we grow enough food and still keep the ground, water, and air clean? I think the answer is yes, but it will take better understanding of how all of those building blocks fit together and move around, from ground to tree to animal and back to ground.

Climate-diameter growth relationships of black spruce and jack pine trees in boreal Ontario, Canada.

PubMed

Subedi, Nirmal; Sharma, Mahadev

2013-02-01

To predict the long-term effects of climate change - global warming and changes in precipitation - on the diameter (radial) growth of jack pine (Pinus banksiana Lamb.) and black spruce (Picea mariana [Mill.] B.S.P.) trees in boreal Ontario, we modified an existing diameter growth model to include climate variables. Diameter chronologies of 927 jack pine and 1173 black spruce trees, growing in the area from 47°N to 50°N and 80°W to 92°W, were used to develop diameter growth models in a nonlinear mixed-effects approach. Our results showed that the variables long-term average of mean growing season temperature, precipitation during wettest quarter, and total precipitation during growing season were significant (alpha = 0.05) in explaining variation in diameter growth of the sample trees. Model results indicated that higher temperatures during the growing season would increase the diameter growth of jack pine trees, but decrease that of black spruce trees. More precipitation during the wettest quarter would favor the diameter growth of both species. On the other hand, a wetter growing season, which may decrease radiation inputs, increase nutrient leaching, and reduce the decomposition rate, would reduce the diameter growth of both species. Moreover, our results indicated that future (2041-2070) diameter growth rate may differ from current (1971-2000) growth rates for both species, with conditions being more favorable for jack pine than black spruce trees. Expected future changes in the growth rate of boreal trees need to be considered in forest management decisions. We recommend that knowledge of climate-growth relationships, as represented by models, be combined with learning from adaptive management to reduce the risks and uncertainties associated with forest management decisions. © 2012 Blackwell Publishing Ltd.

Intraseasonal carbon sequestration and allocation in larch trees growing on permafrost in Siberia after 13C labeling (two seasons of 2013-2014 observation).

PubMed

Masyagina, Oxana; Prokushkin, Anatoly; Kirdyanov, Alexander; Artyukhov, Aleksey; Udalova, Tatiana; Senchenkov, Sergey; Rublev, Aleksey

2016-12-01

This research is an attempt to study seasonal translocation patterns of photoassimilated carbon within trees of one of the high latitudes widespread deciduous conifer species Larix gmelinii (Rupr. Rupr). For this purpose, we applied whole-tree labeling by 13 CO 2 , which is a powerful and effective tool for tracing newly developed assimilates translocation to tissues and organs of a tree. Experimental plot has been established in a mature 105-year-old larch stand located within the continuous permafrost area near Tura settlement (Central Siberia, 64°17'13″N, 100°11'55″E, 148 m a.s.l.). Measurements of seasonal photosynthetic activity and foliage parameters (i.e., leaf length, area, biomass, etc.), and sampling were arranged from early growing season (June 8, 2013; May 14, 2014) until yellowing and senescence of needles (September 17, 2013; September 14, 2014). Labeling by 13 C of the tree branch (June 2013, for 3 branch replicates in 3 different trees) and the whole tree was conducted at early (June 2014), middle (July 2014), and late (August 2013) phase of growing season (for different trees in 3 replicates each time) by three pulses [(CO 2 )max = 3000-4000 ppmv, 13 CO 2 (30 % v/v)]. We found at least two different patterns of carbon translocation associated with larch CO 2 assimilation depending on needle phenology. In early period of growing season (June), 13 C appearing in newly developed needles is a result of remobilized storage material use for growth purposes. Then approximately at the end of June, growth processes is switching to storage processes lasting to the end of growing season.

Audubon Tree Study Program.

ERIC Educational Resources Information Center

National Audubon Society, New York, NY.

Included are an illustrated student reader, "The Story of Trees," a leaders' guide, and a large tree chart with 37 colored pictures. The student reader reviews several aspects of trees: a definition of a tree; where and how trees grow; flowers, pollination and seed production; how trees make their food; how to recognize trees; seasonal changes;…

Climate-resilient agroforestry: physiological responses to climate change and engineering of crassulacean acid metabolism (CAM) as a mitigation strategy: CAM engineering in trees

DOE PAGES

Borland, Anne M.; Wullschleger, Stan D.; Weston, David J.; ...

2014-12-15

We know that global climate change threatens the sustainability of agriculture and agroforestry worldwide through increased heat, drought, surface evaporation and associated soil drying. Exposure of crops and forests to warmer and drier environments will increase leaf:air water vapour–pressure deficits (VPD), and will result in increased drought susceptibility and reduced productivity, not only in arid regions but also in tropical regions with seasonal dry periods. Fast-growing, short-rotation forestry (SRF) bioenergy crops such as poplar (Populus spp.) and willow (Salix spp.) are particularly susceptible to hydraulic failure following drought stress due to their isohydric nature and relatively high stomatal conductance. Onemore » approach to sustaining plant productivity is to improve water-use efficiency (WUE) by engineering crassulacean acid metabolism (CAM) into C3 crops. CAM improves WUE by shifting stomatal opening and primary CO 2 uptake and fixation to the night-time when leaf:air VPD is low. CAMmembers of the tree genus Clusia exemplify the compatibility of CAM performance within tree species and highlight CAM as a mechanism to conserve water and maintain carbon uptake during drought conditions. Moreover, the introduction of bioengineered CAM into SRF bioenergy trees is a potentially viable path to sustaining agroforestry production systems in the face of a globally changing climate.« less

Climate-resilient agroforestry: physiological responses to climate change and engineering of crassulacean acid metabolism (CAM) as a mitigation strategy: CAM engineering in trees

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borland, Anne M.; Wullschleger, Stan D.; Weston, David J.

We know that global climate change threatens the sustainability of agriculture and agroforestry worldwide through increased heat, drought, surface evaporation and associated soil drying. Exposure of crops and forests to warmer and drier environments will increase leaf:air water vapour–pressure deficits (VPD), and will result in increased drought susceptibility and reduced productivity, not only in arid regions but also in tropical regions with seasonal dry periods. Fast-growing, short-rotation forestry (SRF) bioenergy crops such as poplar (Populus spp.) and willow (Salix spp.) are particularly susceptible to hydraulic failure following drought stress due to their isohydric nature and relatively high stomatal conductance. Onemore » approach to sustaining plant productivity is to improve water-use efficiency (WUE) by engineering crassulacean acid metabolism (CAM) into C3 crops. CAM improves WUE by shifting stomatal opening and primary CO 2 uptake and fixation to the night-time when leaf:air VPD is low. CAMmembers of the tree genus Clusia exemplify the compatibility of CAM performance within tree species and highlight CAM as a mechanism to conserve water and maintain carbon uptake during drought conditions. Moreover, the introduction of bioengineered CAM into SRF bioenergy trees is a potentially viable path to sustaining agroforestry production systems in the face of a globally changing climate.« less

Dendrometer studies in urban and rural environments in Stockholm, Sweden

NASA Astrophysics Data System (ADS)

Rocha, Eva; Holzkämper, Steffen

2017-04-01

With this study we investigate growth performances of Pinus sylvestris growing under the influence of the Urban Heat Island of the city of Stockholm, Sweden, and trees growing in the rural surrounding of the city. The aims of this investigation are to see whether and how much the growth performances differ, and which climatic parameters control the tree growth at the respective locations. Stockholm holds one of the world's longest observational climate records, reaching back to AD 1756. Since climate data are collected at a location which today is well within the Urban Heat Island, it is relevant to quantify the correlation differences between climate and tree growth data from trees which actually grow under the same climate conditions and trees growing under natural, rural climate conditions. Applied methods include Remote Sensing and GIS for identification and characterization of the Urban Heat Island, monitoring of tree growth at 30 min-resolution with point dendrometers (Ecomatik) and monitoring of local climate directly at the tree sites. First results indicate emphasized growth differences between the urban and the rural sites, with distinctively higher daily diameter change amplitudes at the urban sites compared to the rural sites, which can be explained by differences in relative humidity and temperature ranges between the sites. We will present and discuss results from 1 year of measurements, focusing on correlation analysis between climate and tree growth data from urban and rural sites, as well as practical issues with dendrometer measurements.

Seasonal Shift in Climatic Limiting Factors on Tree Transpiration: Evidence from Sap Flow Observations at Alpine Treelines in Southeast Tibet

PubMed Central

Liu, Xinsheng; Nie, Yuqin; Luo, Tianxiang; Yu, Jiehui; Shen, Wei; Zhang, Lin

2016-01-01

Alpine and northern treelines are primarily controlled by low temperatures. However, little is known about the impact of low soil temperature on tree transpiration at treelines. We aim to test the hypothesis that in cold-limited forests, the main limiting factors for tree transpiration switch from low soil temperature before summer solstice to atmospheric evaporative demand after summer solstice, which generally results in low transpiration in the early growing season. Sap flow, meteorological factors and predawn needle water potential were continuously monitored throughout one growing season across Smith fir (Abies georgei var. smithii) and juniper (Juniperus saltuaria) treelines in southeast Tibet. Sap flow started in early May and corresponded to a threshold mean air-temperature of 0°C. Across tree species, transpiration was mainly limited by low soil temperature prior to the summer solstice but by vapor pressure deficit and solar radiation post-summer solstice, which was further confirmed on a daily scale. As a result, tree transpiration for both tree species was significantly reduced in the pre-summer solstice period as compared to post-summer solstice, resulting in a lower predawn needle water potential for Smith fir trees in the early growing season. Our data supported the hypothesis, suggesting that tree transpiration mainly responds to soil temperature variations in the early growing season. The results are important for understanding the hydrological response of cold-limited forest ecosystems to climate change. PMID:27468289

Bottomland hardwood establishment and avian colonization of reforested sites in the Mississippi Alluvial Valley

USGS Publications Warehouse

Wilson, R.R.; Twedt, D.J.; Fredrickson, L.H.; King, S.L.; Kaminski, R.M.

2005-01-01

Reforestation of bottomland hardwood sites in the Mississippi Alluvial Valley has markedly increased in recent years, primarily due to financial incentive programs such as the Wetland Reserve Program, Partners for Wildlife Program, and state and private conservation programs. An avian conservation plan for the Mississippi Alluvial Valley proposes returning a substantial area of cropland to forested wetlands. Understanding how birds colonize reforested sites is important to assess the effectiveness of avian conservation. We evaluated establishment of woody species and assessed bird colonization on 89 reforested sites. These reforested sites were primarily planted with heavy-seeded oaks (Quercus spp.) and pecans (Carya illinoensis). Natural invasion of light-seeded species was expected to diversify these forests for wildlife and sustainable timber harvest. Planted tree species averaged 397 + 36 stems/ha-1, whereas naturally invading trees averaged 1675 + 241 stems/ha. However, naturally invading trees were shorter than planted trees and most natural invasion occurred <100 m from an existing forested edge. Even so, planted trees were relatively slow to develop vertical structure, especially when compared with tree species planted and managed for pulpwood production. Slow development of vertical structure resulted in grassland bird species, particularly dickcissel (Spiza americana) and red-winged blackbird (Agelaius phoeniceus), being the dominant avian colonizers for the first 7 years post-planting. High priority bird species (as defined by Partners in Flight), such as prothonotary warbler (Protonotaria citrea) and wood thrush (Hylocichla mustelina), were not frequently detected until stands were 15 years old. Canonical correspondence analysis revealed tree height had the greatest influence on the bird communities colonizing reforested sites. Because colonization by forest birds is dependent on tree height, we recommend inclusion of at least one fast-growing tree species (e.g., cottonwood [Populus deltoides], or sycamore [Platanus occidentalis]) in the planting stock to encourage rapid avian colonization.

Nutrient cycling and Above- and Below-ground Interactions in a Runoff Agroforestry System Applied with Composted Tree Trimmings

NASA Astrophysics Data System (ADS)

Ilani, Talli; Ephrath, Jhonathan; Silberbush, Moshe; Berliner, Pedro

2014-05-01

The primary production in arid zones is limited due to shortage of water and nutrients. Conveying flood water and storing it in plots surrounded by embankments allows their cropping. The efficient exploitation of the stored water can be achieved through an agroforestry system, in which two crops are grown simultaneously: annual crops with a shallow root system and trees with a deeper root system. We posit that the long-term productivity of this system can be maintained by intercropping symbiotic N fixing shrubs with annual crops, and applying the pruned and composted shrub leaves to the soil, thus ensuring an adequate nitrogen level (a limiting factor in drylands) in the soil. To test our hypothesis we carried a two year trial in which fast-growing acacia (A. saligna) trees were the woody component and maize (Zea mays L.) the intercrop. Ten treatments were applied over two maize growth seasons to examine the below- and above-ground effects of tree pruning, compost application and interactions. The addition of compost in the first growth season led to an increase of the soil organic matter reservoir, which was the main N source for the maize during the following growth season. In the second growth season the maize yield was significantly higher in the plots to which compost was applied. Pruning the tree's canopies changed the trees spatial and temporal root development, allowing the annual crop to develop between the trees. The roots of pruned trees intercropped with maize penetrated deeper in the soil. The intercropping of maize within pruned trees and implementing compost resulted in a higher water use efficiency of the water stored in the soil when compared to the not composted and monoculture treatments. The results presented suggest that the approach used in this study can be the basis for achieving sustainable agricultural production under arid conditions.

Ponderosa pine resin defenses and growth: metrics matter.

PubMed

Hood, Sharon; Sala, Anna

2015-11-01

Bark beetles (Coleoptera: Curculionidae, Scolytinae) cause widespread tree mortality in coniferous forests worldwide. Constitutive and induced host defenses are important factors in an individual tree's ability to survive an attack and in bottom-up regulation of bark beetle population dynamics, yet quantifying defense levels is often difficult. For example, in Pinus spp., resin flow is important for resistance to bark beetles but is extremely variable among individuals and within a season. While resin is produced and stored in resin ducts, the specific resin duct metrics that best correlate with resin flow remain unclear. The ability and timing of some pine species to produce induced resin is also not well understood. We investigated (i) the relationships between ponderosa pine (Pinus ponderosa Lawson & C. Lawson) resin flow and axial resin duct characteristics, tree growth and physiological variables, and (ii) if mechanical wounding induces ponderosa pine resin flow and resin ducts in the absence of bark beetles. Resin flow increased later in the growing season under moderate water stress and was highest in faster growing trees. The best predictors of resin flow were nonstandardized measures of resin ducts, resin duct size and total resin duct area, both of which increased with tree growth. However, while faster growing trees tended to produce more resin, models of resin flow using only tree growth were not statistically significant. Further, the standardized measures of resin ducts, density and duct area relative to xylem area, decreased with tree growth rate, indicating that slower growing trees invested more in resin duct defenses per unit area of radial growth, despite a tendency to produce less resin overall. We also found that mechanical wounding induced ponderosa pine defenses, but this response was slow. Resin flow increased after 28 days, and resin duct production did not increase until the following year. These slow induced responses may allow unsuccessfully attacked or wounded trees to resist future bark beetle attacks. Forest management that encourages healthy, vigorously growing trees will also favor larger resin ducts, thereby conferring increased constitutive resistance to bark beetle attacks. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Element concentrations in growth rings of trees near an abandoned wood-preserving plant site at Jackson, Tennessee

USGS Publications Warehouse

Yanosky, T.M.; Carmichael, J.K.

1993-01-01

Multielement analysis was performed on individual annual rings of trees growing at and near an abandoned wood-preserving plant site in Jackson, Tennessee, that operated from the early 1930's until 1981. Numerous organic compounds associated with the wood-preserving process have been detected in soils, ground water, and surface water within much of the site. Tree-ring investigations were conducted prior to investigations of ground water downgradient from the site to determine if trees preserved an areal and temporal record of contaminant movement into offsite areas. Increment cores were collected from trees on the abandoned plant site, in downgradient areas west and south of the site, and at two locations presumably unaffected by contamination from the site. Multielement analysis by proton-induced X-ray emission was performed on 5 to 15 individual growth rings from each of 34 trees that ranged in age from about 5 to 50 years. Concentrations of 16 elements were evaluated by analyzing average concentrations within the 1987, 1989, and 1990 rings of all trees; analyzing element-concentration trends along entire core radii; and analyzing element correlations between and among trees. Concentrations of some nutrients and trace metals were elevated in the outermost sapwood rings of some trees that grow south and southwest of the most contaminated part of the site; small trees on the main part of the site and larger trees to the west generally contained fewer rings with elevated concentrations, particularly of trace metals. Concentrations of several elements elevated in tree rings also were elevated in water samples collected from the reach of a stream that flows near the southwestern part of the site. Multielement analysis of each ring of a willow growing along the southern boundary of the site detected extremely large concentrations of chromium, nickel, and iron in rings that formed in 1986 and thereafter. Relative increases in the concentrations of these elements also were detected in a silver maple growing next to the willow, but not in another silver maple growing 150 meters farther to the west. An oak growing in the southwestern part of the study area contained large concentrations of calcium and several trace elements, and some trees south of the abandoned site contained large concentrations of phosphorus or potassium. Concentrations of trace metals and nutrients in some trees may be related to wood-preserving activities at the site and possibly to remedial efforts conducted during the early to mid 1980's.However, the possibility cannot be discounted that large concentrations of some elements are from sources other than the wood-preserving facility, or in part from flooding of the South Fork Forked Deer River.

Competitive code-based fast palmprint identification using a set of cover trees

NASA Astrophysics Data System (ADS)

Yue, Feng; Zuo, Wangmeng; Zhang, David; Wang, Kuanquan

2009-06-01

A palmprint identification system recognizes a query palmprint image by searching for its nearest neighbor from among all the templates in a database. When applied on a large-scale identification system, it is often necessary to speed up the nearest-neighbor searching process. We use competitive code, which has very fast feature extraction and matching speed, for palmprint identification. To speed up the identification process, we extend the cover tree method and propose to use a set of cover trees to facilitate the fast and accurate nearest-neighbor searching. We can use the cover tree method because, as we show, the angular distance used in competitive code can be decomposed into a set of metrics. Using the Hong Kong PolyU palmprint database (version 2) and a large-scale palmprint database, our experimental results show that the proposed method searches for nearest neighbors faster than brute force searching.

Fast generations of tree-type three-dimensional entanglement via Lewis-Riesenfeld invariants and transitionless quantum driving

PubMed Central

Wu, Jin-Lei; Ji, Xin; Zhang, Shou

2016-01-01

Recently, a novel three-dimensional entangled state called tree-type entanglement, which is likely to have applications for improving quantum communication security, was prepared via adiabatic passage by Song et al. Here we propose two schemes for fast generating tree-type three-dimensional entanglement among three spatially separated atoms via shortcuts to adiabatic passage. With the help of quantum Zeno dynamics, two kinds of different but equivalent methods, Lewis-Riesenfeld invariants and transitionless quantum driving, are applied to construct shortcuts to adiabatic passage. The comparisons between the two methods are discussed. The strict numerical simulations show that the tree-type three-dimensional entangled states can be fast prepared with quite high fidelities and the two schemes are both robust against the variations in the parameters, atomic spontaneous emissions and the cavity-fiber photon leakages. PMID:27667583

Cancer Strikes Out!/Definitions/ Glossary/ Common Types

MedlinePlus

... have an indolent (slow-growing) course or an aggressive (fast-growing) course. These subtypes behave and respond ... non-Hodgkin's lymphoma, which can be divided into aggressive (fast-growing) and indolent (slow-growing) types and ...

Calibration of the Diameter Distribution Derived from the Area-based Approach with Individual Tree-based Diameter Estimates Using the Airborne Laser Scanning

NASA Astrophysics Data System (ADS)

Xu, Q.; Hou, Z.; Maltamo, M.; Tokola, T.

2015-12-01

Diameter distributions of trees are important indicators of current forest stand structure and future dynamics. A new method was proposed in the study to combine the diameter distributions derived from the area-based approach (ABA) and the diameter distribution derived from the individual tree detection (ITD) in order to obtain more accurate forest stand attributes. Since dominant trees can be reliably detected and measured by the Lidar data via the ITD, the focus of the study is to retrieve the suppressed trees (trees that were missed by the ITD) from the ABA. Replacement and histogram matching were respectively employed at the plot level to retrieve the suppressed trees. Cut point was detected from the ITD-derived diameter distribution for each sample plot to distinguish dominant trees from the suppressed trees. The results showed that calibrated diameter distributions were more accurate in terms of error index and the entire growing stock estimates. Compared with the best performer between the ABA and the ITD, calibrated diameter distributions decreased the relative RMSE of the estimated entire growing stock, saw log and pulpwood fractions by 2.81%, 3.05% and 7.73% points respectively. Calibration improved the estimation of pulpwood fraction significantly, resulting in a negligible bias of the estimated entire growing stock.

Tree colonization by the Asian longhorn beetle, Anoplophora glabripennis (Coleoptera: Cerambycidae): effect of habitat and tree suitability.

PubMed

Faccoli, Massimo; Favaro, Riccardo; Concheri, Giuseppe; Squartini, Andrea; Battisti, Andrea

2016-04-01

Tree colonization and feeding activity of the invasive wood-borer Asian longhorn beetle (Anoplophora glabripennis), an Asian pest introduced into North America and Europe, was studied in a newly invaded area in Italy. The hypothesis being tested was that the reproductive success of the insect depend on habitat type and tree suitability. Adult beetles were caged on branches of host and nonhost species, in both urban and forest habitats. Two months later, number and size of feeding patches on plant tissues, eggs laid, and surviving larvae were assessed. Bark concentration of C and N was also measured from the same trees. Results indicated that the mean area of plant tissues consumed by adult feeding was significantly larger on trees growing in forest than in urban habitat, although within the same habitat there were no differences between susceptible and nonsusceptible trees. ALB tree colonization, in terms of number of eggs laid and young larvae survival, was not affected by habitat while it was higher on susceptible trees. Although trees growing in forests had a lower nitrogen concentration, they allowed colonization rates similar to those of trees growing in the urban habitat. Hence, the amount of carbon and nitrogen did not fully explain tree suitability or habitat selection. We suggest compensatory feeding as a potential mechanism that might explain this peculiar situation, as supported by a more intensive feeding activity recorded on trees in the forest. Suitability of different trees may be due to other factors, such as secondary chemical compounds. © 2014 Institute of Zoology, Chinese Academy of Sciences.

Fast and Robust Segmentation and Classification for Change Detection in Urban Point Clouds

NASA Astrophysics Data System (ADS)

Roynard, X.; Deschaud, J.-E.; Goulette, F.

2016-06-01

Change detection is an important issue in city monitoring to analyse street furniture, road works, car parking, etc. For example, parking surveys are needed but are currently a laborious task involving sending operators in the streets to identify the changes in car locations. In this paper, we propose a method that performs a fast and robust segmentation and classification of urban point clouds, that can be used for change detection. We apply this method to detect the cars, as a particular object class, in order to perform parking surveys automatically. A recently proposed method already addresses the need for fast segmentation and classification of urban point clouds, using elevation images. The interest to work on images is that processing is much faster, proven and robust. However there may be a loss of information in complex 3D cases: for example when objects are one above the other, typically a car under a tree or a pedestrian under a balcony. In this paper we propose a method that retain the three-dimensional information while preserving fast computation times and improving segmentation and classification accuracy. It is based on fast region-growing using an octree, for the segmentation, and specific descriptors with Random-Forest for the classification. Experiments have been performed on large urban point clouds acquired by Mobile Laser Scanning. They show that the method is as fast as the state of the art, and that it gives more robust results in the complex 3D cases.

Enhanced Degradation of TCE on a Superfund Site Using Endophyte-Assisted Poplar Tree Phytoremediation.

PubMed

Doty, Sharon L; Freeman, John L; Cohu, Christopher M; Burken, Joel G; Firrincieli, Andrea; Simon, Andrew; Khan, Zareen; Isebrands, J G; Lukas, Joseph; Blaylock, Michael J

2017-09-05

Trichloroethylene (TCE) is a widespread environmental pollutant common in groundwater plumes associated with industrial manufacturing areas. We had previously isolated and characterized a natural bacterial endophyte, Enterobacter sp. strain PDN3, of poplar trees, that rapidly metabolizes TCE, releasing chloride ion. We now report findings from a successful three-year field trial of endophyte-assisted phytoremediation on the Middlefield-Ellis-Whisman Superfund Study Area TCE plume in the Silicon Valley of California. The inoculated poplar trees exhibited increased growth and reduced TCE phytotoxic effects with a 32% increase in trunk diameter compared to mock-inoculated control poplar trees. The inoculated trees excreted 50% more chloride ion into the rhizosphere, indicative of increased TCE metabolism in planta. Data from tree core analysis of the tree tissues provided further supporting evidence of the enhanced rate of degradation of the chlorinated solvents in the inoculated trees. Test well groundwater analyses demonstrated a marked decrease in concentration of TCE and its derivatives from the tree-associated groundwater plume. The concentration of TCE decreased from 300 μg/L upstream of the planted area to less than 5 μg/L downstream of the planted area. TCE derivatives were similarly removed with cis-1,2-dichloroethene decreasing from 160 μg/L to less than 5 μg/L and trans-1,2-dichloroethene decreasing from 3.1 μg/L to less than 0.5 μg/L downstream of the planted trees. 1,1-dichloroethene and vinyl chloride both decreased from 6.8 and 0.77 μg/L, respectively, to below the reporting limit of 0.5 μg/L providing strong evidence of the ability of the endophytic inoculated trees to effectively remove TCE from affected groundwater. The combination of native pollutant-degrading endophytic bacteria and fast-growing poplar tree systems offers a readily deployable, cost-effective approach for the degradation of TCE, and may help mitigate potential transfer up the food chain, volatilization to the atmosphere, as well as direct phytotoxic impacts to plants used in this type of phytoremediation.

Effects of first thinning on growth of loblolly pine plantations in the West Coastal Plain

Treesearch

Dean W. Coble; Jason B. Grogan

2016-01-01

The purpose of this research is to analyze thinning response in basal area and height growth of residual loblolly pine trees growing in plantations located in the West Gulf Coastal Plain. Thinning is a well-known silvicultural practice that increases the growing space available to desirable trees by removing competing trees.

The use of stored carbon reserves in growth of temperate tree roots and leaf buds: Analyses using radiocarbon measurements and modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gaudinski, J.B.; Torn, M.S.; Riley, W.J.

2009-02-01

Characterizing the use of carbon (C) reserves in trees is important for understanding regional and global C cycles, stress responses, asynchrony between photosynthetic activity and growth demand, and isotopic exchanges in studies of tree physiology and ecosystem C cycling. Using an inadvertent, whole-ecosystem radiocarbon ({sup 14}C) release in a temperate deciduous oak forest and numerical modeling, we estimated that the mean age of stored C used to grow both leaf buds and new roots is 0.7 years and about 55% of new-root growth annually comes from stored C. Therefore, the calculated mean age of C used to grow new-root tissuemore » is {approx}0.4 years. In short, new roots contain a lot of stored C but it is young in age. Additionally, the type of structure used to model stored C input is important. Model structures that did not include storage, or that assumed stored and new C mixed well (within root or shoot tissues) before being used for root growth, did not fit the data nearly as well as when a distinct storage pool was used. Consistent with these whole-ecosystem labeling results, the mean age of C in new-root tissues determined using 'bomb-{sup 14}C' in three additional forest sites in North America and Europe (one deciduous, two coniferous) was less than 1-2 years. The effect of stored reserves on estimated ages of fine roots is unlikely to be large in most natural abundance isotope studies. However, models of root C dynamics should take stored reserves into account, particularly for pulse-labeling studies and fast-cycling roots (<1 years).« less

Potential of Eucalyptus camaldulensis for phytostabilization and biomonitoring of trace-element contaminated soils

PubMed Central

Marañón, Teodoro; Navarro-Fernández, Carmen M.; Domínguez, María T.; Alegre, José M.; Robinson, Brett; Murillo, José M.

2017-01-01

Soil pollution by trace elements (TEs) from mining and industrial activity is widespread and presents a risk to humans and ecosystems. The use of trees to immobilize TEs (phytostabilization) is a low-cost and effective method of soil remediation. We aimed to determine the chemical composition of leaves and flower buds of Eucalyptus camaldulensis in seven sites along the Guadiamar River valley (SW Spain), an area contaminated by a mine-spill in 1998. E. camaldulensis trees in the spill-affected area and adjacent non affected areas were growing on a variety of soils with pH from 5.6 to 8.1 with low concentration of plant nutrients. The spill affected soils contained up to 1069 mg kg-1 of As and 4086 mg kg-1 of Pb. E. camaldulensis tolerated elevated TE concentrations in soil and, compared to other species growing in the same environment, had low TE concentrations in the aerial portions. Besides tolerance to soil contamination, E. camaldulensis had low bioaccumulation coefficients for soil contaminants. TE concentrations in the aboveground portions were below levels reported to be toxic to plants or ecosystems. Flower buds had even lower TE concentrations than leaves. Despite the relatively low concentration of TEs in leaves they were significantly correlated with the soil extractable (0.01 M CaCl2) Cd, Mn and Zn (but not Cu and Pb). The general features of this tree species: tolerance to impoverished and contaminated soils, fast growth and deep root system, and low transfer of TEs from soil to aboveground organs makes it suitable for phytostabilization of soils contaminated by TEs. In addition, eucalyptus leaves could be used for biomonitoring the soil extractability of Cd, Mn and Zn but not Cu or Pb. PMID:28666017

Potential of Eucalyptus camaldulensis for phytostabilization and biomonitoring of trace-element contaminated soils.

PubMed

Madejón, Paula; Marañón, Teodoro; Navarro-Fernández, Carmen M; Domínguez, María T; Alegre, José M; Robinson, Brett; Murillo, José M

2017-01-01

Soil pollution by trace elements (TEs) from mining and industrial activity is widespread and presents a risk to humans and ecosystems. The use of trees to immobilize TEs (phytostabilization) is a low-cost and effective method of soil remediation. We aimed to determine the chemical composition of leaves and flower buds of Eucalyptus camaldulensis in seven sites along the Guadiamar River valley (SW Spain), an area contaminated by a mine-spill in 1998. E. camaldulensis trees in the spill-affected area and adjacent non affected areas were growing on a variety of soils with pH from 5.6 to 8.1 with low concentration of plant nutrients. The spill affected soils contained up to 1069 mg kg-1 of As and 4086 mg kg-1 of Pb. E. camaldulensis tolerated elevated TE concentrations in soil and, compared to other species growing in the same environment, had low TE concentrations in the aerial portions. Besides tolerance to soil contamination, E. camaldulensis had low bioaccumulation coefficients for soil contaminants. TE concentrations in the aboveground portions were below levels reported to be toxic to plants or ecosystems. Flower buds had even lower TE concentrations than leaves. Despite the relatively low concentration of TEs in leaves they were significantly correlated with the soil extractable (0.01 M CaCl2) Cd, Mn and Zn (but not Cu and Pb). The general features of this tree species: tolerance to impoverished and contaminated soils, fast growth and deep root system, and low transfer of TEs from soil to aboveground organs makes it suitable for phytostabilization of soils contaminated by TEs. In addition, eucalyptus leaves could be used for biomonitoring the soil extractability of Cd, Mn and Zn but not Cu or Pb.

Direct and indirect antioxidant activity of polyphenol- and isothiocyanate-enriched fractions from Moringa oleifera.

PubMed

Tumer, Tugba Boyunegmez; Rojas-Silva, Patricio; Poulev, Alexander; Raskin, Ilya; Waterman, Carrie

2015-02-11

Moringa oleifera Lam. is a fast-growing, tropical tree with various edible parts used as nutritious food and traditional medicine. This study describes an efficient preparatory strategy to extract and fractionate moringa leaves by fast centrifugal partition chromatography (FCPC) to produce polyphenol and isothiocyanate (ITC) rich fractions. Characterization and further purification of these fractions showed that moringa polyphenols were potent direct antioxidants assayed by oxygen radical absorbance capacity (ORAC), whereas moringa ITCs were effective indirect antioxidants assayed by induction of NAD(P)H quinone oxidoreductase 1 (NQO1) activity in Hepa1c1c7 cells. In addition, purified 4-[(α-l-rhamnosyloxy)benzyl]isothiocyanate and 4-[(4'-O-acetyl-α-l-rhamnosyloxy)benzyl]isothiocyanate were further evaluated for their ORAC and NQO1 inducer potency in comparison with sulforaphane (SF). Both ITCs were as potent as SF in inducing NQO1 activity. These findings suggest that moringa leaves contain a potent mixture of direct and indirect antioxidants that can explain its various health-promoting effects.

Nutrient leaching from container-grown ornamental tree production

USDA-ARS?s Scientific Manuscript database

Economically producing marketable container-grown ornamental shade trees with minimum amounts of nutrient leachate requires better management of nutrient applications during a growing season. Fertilizer practices with 16 treatments were used to test the nutrient leachate for growing Acer rubrum ‘Red...

Foliar nutrient concentrations in balsam fir as affected by soil drainage and methods of slash disposal

Treesearch

Miroslaw M. Czapowskyj

1979-01-01

Foliar nutrient concentrations in young balsam fir growing on strip clearcuts were assessed in relation to soil drainage and three methods of slash disposal. Concentrations of N, K, and Mn were higher for trees growing on well-drained soils than for trees growing on poorly drained soils. Mo concentrations were higher on poorly drained soils and all other measured...

Results after 20 years from a western larch levels-of-growing-stock study.

Treesearch

K.W. Seidel

1987-01-01

The 20-year growth response from a levels-of-growing-stock study in an even-aged western larch stand in eastern Oregon, first thinned at age 33, showed that trees growing at low stand densities grew more rapidly in diameter than trees in high-density plots. Height growth was relatively uniform among density levels. Both basal-area and total cubic-volume increment...

A Very Fast and Angular Momentum Conserving Tree Code

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marcello, Dominic C., E-mail: dmarce504@gmail.com

There are many methods used to compute the classical gravitational field in astrophysical simulation codes. With the exception of the typically impractical method of direct computation, none ensure conservation of angular momentum to machine precision. Under uniform time-stepping, the Cartesian fast multipole method of Dehnen (also known as the very fast tree code) conserves linear momentum to machine precision. We show that it is possible to modify this method in a way that conserves both angular and linear momenta.

Multispectral color photography for mineral exploration by the remote sensing of biogeochemical anomalies

NASA Technical Reports Server (NTRS)

Yost, E.

1975-01-01

Selected band multispectral photography was evaluated as a mineral exploration tool by detecting stress on trees caused by underground mineralization. Ground truth consisted of two test sites in the Prescott National Forest within which the mineralization had been established by a drilling program. Species of trees were categorized as background, intermediate, and anomalous based upon where they grew with respect to this underlying mineralization. Soil geochemistry and the metal content of ashed samples of the trees were studied in relation to the inferred locus of mineralization. Computer analysis of the reflectance spectra of mineralized trees confirmed that the relative percent reflectance differences of trees growing in anomalous areas was less than that of the same tree species growing in background areas.

Wind loads and competition for light sculpt trees into self-similar structures.

PubMed

Eloy, Christophe; Fournier, Meriem; Lacointe, André; Moulia, Bruno

2017-10-18

Trees are self-similar structures: their branch lengths and diameters vary allometrically within the tree architecture, with longer and thicker branches near the ground. These tree allometries are often attributed to optimisation of hydraulic sap transport and safety against elastic buckling. Here, we show that these allometries also emerge from a model that includes competition for light, wind biomechanics and no hydraulics. We have developed MECHATREE, a numerical model of trees growing and evolving on a virtual island. With this model, we identify the fittest growth strategy when trees compete for light and allocate their photosynthates to grow seeds, create new branches or reinforce existing ones in response to wind-induced loads. Strikingly, we find that selected trees species are self-similar and follow allometric scalings similar to those observed on dicots and conifers. This result suggests that resistance to wind and competition for light play an essential role in determining tree allometries.

Response of native soil microbial functions to the controlled mycorrhization of an exotic tree legume, Acacia holosericea in a Sahelian ecosystem.

PubMed

Bilgo, Ablasse; Sangare, Sheikh K; Thioulouse, Jean; Prin, Yves; Hien, Victor; Galiana, Antoine; Baudoin, Ezekeil; Hafidi, Mohamed; Bâ, Amadou M; Duponnois, Robin

2012-04-01

Fifty years of overexploitation have disturbed most forests within Sahelian areas. Exotic fast growing trees (i.e., Australian Acacia species) have subsequently been introduced for soil improvement and fuelwood production purposes. Additionally, rhizobial or mycorrhizal symbioses have sometimes been favored by means of controlled inoculations to increase the performance of these exotic trees in such arid and semiarid zones. Large-scale anthropogenic introduction of exotic plants could also threaten the native biodiversity and ecosystem resilience. We carried out an experimental reforestation in Burkina Faso in order to study the effects of Acacia holosericea mycorrhizal inoculation on the soil nutrient content, microbial soil functionalities and mycorrhizal soil potential. Treatments consisted of uninoculated A. holosericea, preplanting fertilizer application and arbuscular mycorrhizal inoculation with Glomus intraradices. Our results showed that (i) arbuscular mycorrhizal (AM) inoculation and prefertilizer application significantly improved A. holosericea growth after 4 years of plantation and (ii) the introduction of A. holosericea trees significantly modified soil microbial functions. The results clearly showed that the use of exotic tree legume species should be directly responsible for important changes in soil microbiota with great disturbances in essential functions driven by microbial communities (e.g., catabolic diversity and C cycling, phosphatase activity and P availability). They also highlighted the importance of AM symbiosis in the functioning of soils and forest plantation performances. The AM effect on soil functions was significantly correlated with the enhanced mycorrhizal soil potential recorded in the AM inoculation treatment. © Springer-Verlag 2011

Growth process and model simulation of three different classes of Schima superba in a natural subtropical forest in China

NASA Astrophysics Data System (ADS)

Wei, Hui; Deng, Xiangwen; Ouyang, Shuai; Chen, Lijun; Chu, Yonghe

2017-01-01

Schima superba is an important fire-resistant, high-quality timber species in southern China. Growth in height, diameter at breast height (DBH), and volume of the three different classes (overtopped, average and dominant) of S. superba were examined in a natural subtropical forest. Four growth models (Richards, edited Weibull, Logistic and Gompertz) were selected to fit the growth of the three different classes of trees. The results showed that there was a fluctuation phenomenon in height and DBH current annual growth process of all three classes. Multiple intersections were found between current annual increment (CAI) and mean annual increment (MAI) curves of both height and DBH, but there was no intersection between volume CAI and MAI curves. All selected models could be used to fit the growth of the three classes of S. superba, with determinant coefficients above 0.9637. However, the edited Weibull model performed best with the highest R2 and the lowest root of mean square error (RMSE). S. superba is a fast-growing tree with a higher growth rate during youth. The height and DBH CAIs of overtopped, average and dominant trees reached growth peaks at ages 5-10, 10-15 and 15-20 years, respectively. According to model simulation, the volume CAIs of overtopped, average and dominant trees reached growth peaks at ages 17, 55 and 76 years, respectively. The biological rotation ages of the overtopped, average and dominant trees of S. superba were 29, 85 and 128 years, respectively.

Urban tree database and allometric equations

Treesearch

E. Gregory McPherson; Natalie S. van Doorn; Paula J.  Peper

2016-01-01

Information on urban tree growth underpins models used to calculate the effects of trees on the environment and human well-being. Maximum tree size and other growth data are used by urban forest managers, landscape architects, and planners to select trees most suitable to the amount of growing space, thereby reducing costly future conflicts between trees and...

Righting response of artificially inclined maritime pine (Pinus pinaster) saplings to wind loading.

PubMed

Berthier, Stephane; Stokes, Alexia

2006-01-01

To determine if trees respond to dynamic and static loading in the same manner, 2-year-old maritime pine (Pinus pinaster Ait.) trees were subjected to different types of mechanical loading in the field. One block of trees (the control) were kept in pots and planted in the field at an angle of 0 or 45 degrees to the vertical. A similar block of leaning potted trees was planted nearby and subjected to frequent, unilateral wind loading for a period of 1 s every 2 min. Half the leaning trees were oriented toward the direction of wind loading and half were oriented along the axis of wind loading. The stem profile was measured three times during the growing season to quantify the rate of stem straightening. Compression wood formation and stem shape were measured in all plants. No differences in mean height or diameter were observed between blocks and all leaning trees straightened, but not at the same rate. Although no difference in the rate of apical straightening occurred between control and wind-treated trees, the righting response of the basal part of the stem of leaning trees subjected to wind was four times greater than that of leaning trees without wind. No differences in the righting response were observed between leaning trees growing toward and trees growing away from the source of wind. No significant differences in compression wood formation were found between control trees and wind-treated trees, indicating that other factors must determine the reorientation rate of leaning trees. Results are discussed with reference to the quality of compression wood in conifers and the mechanotransductive pathway in plants.

Designing mixed species tree plantations for the tropics: balancing ecological attributes of species with landholder preferences in the Philippines.

PubMed

Nguyen, Huong; Lamb, David; Herbohn, John; Firn, Jennifer

2014-01-01

A mixed species reforestation program known as the Rainforestation Farming system was undertaken in the Philippines to develop forms of farm forestry more suitable for smallholders than the simple monocultural plantations commonly used then. In this study, we describe the subsequent changes in stand structure and floristic composition of these plantations in order to learn from the experience and develop improved prescriptions for reforestation systems likely to be attractive to smallholders. We investigated stands aged from 6 to 11 years old on three successive occasions over a 6 year period. We found the number of species originally present in the plots as trees >5 cm dbh decreased from an initial total of 76 species to 65 species at the end of study period. But, at the same time, some new species reached the size class threshold and were recruited into the canopy layer. There was a substantial decline in tree density from an estimated stocking of about 5000 trees per ha at the time of planting to 1380 trees per ha at the time of the first measurement; the density declined by a further 4.9% per year. Changes in composition and stand structure were indicated by a marked shift in the Importance Value Index of species. Over six years, shade-intolerant species became less important and the native shade-tolerant species (often Dipterocarps) increased in importance. Based on how the Rainforestation Farming plantations developed in these early years, we suggest that mixed-species plantations elsewhere in the humid tropics should be around 1000 trees per ha or less, that the proportion of fast growing (and hence early maturing) trees should be about 30-40% of this initial density and that any fruit tree component should only be planted on the plantation margin where more light and space are available for crowns to develop.

Designing Mixed Species Tree Plantations for the Tropics: Balancing Ecological Attributes of Species with Landholder Preferences in the Philippines

PubMed Central

Nguyen, Huong; Lamb, David; Herbohn, John; Firn, Jennifer

2014-01-01

A mixed species reforestation program known as the Rainforestation Farming system was undertaken in the Philippines to develop forms of farm forestry more suitable for smallholders than the simple monocultural plantations commonly used then. In this study, we describe the subsequent changes in stand structure and floristic composition of these plantations in order to learn from the experience and develop improved prescriptions for reforestation systems likely to be attractive to smallholders. We investigated stands aged from 6 to 11 years old on three successive occasions over a 6 year period. We found the number of species originally present in the plots as trees >5 cm dbh decreased from an initial total of 76 species to 65 species at the end of study period. But, at the same time, some new species reached the size class threshold and were recruited into the canopy layer. There was a substantial decline in tree density from an estimated stocking of about 5000 trees per ha at the time of planting to 1380 trees per ha at the time of the first measurement; the density declined by a further 4.9% per year. Changes in composition and stand structure were indicated by a marked shift in the Importance Value Index of species. Over six years, shade-intolerant species became less important and the native shade-tolerant species (often Dipterocarps) increased in importance. Based on how the Rainforestation Farming plantations developed in these early years, we suggest that mixed-species plantations elsewhere in the humid tropics should be around 1000 trees per ha or less, that the proportion of fast growing (and hence early maturing) trees should be about 30–40% of this initial density and that any fruit tree component should only be planted on the plantation margin where more light and space are available for crowns to develop. PMID:24751720

Knowledge Quality Functions for Rule Discovery

DTIC Science & Technology

1994-09-01

Managers in many organizations finding themselves in the possession of large and rapidly growing databases are beginning to suspect the information in their...missing values (Smyth and Goodman, 1992, p. 303). Decision trees "tend to grow very large for realistic applications and are thus difficult to interpret...by humans" (Holsheimer, 1994, p. 42). Decision trees also grow excessively complicated in the presence of noisy databases (Dhar and Tuzhilin, 1993, p

Micropropagation of frost-resistant Eucalyptus

Treesearch

Michel Boulay

1983-01-01

A method for the in vitro propagation of frost resistant eucalyptus is presented. It was used for the propagation of 2-30 years old trees. This method is presently used for the fast production of mother trees from selected trees.

Leveraging the Novel Climates of Arboreta to Understand Tree Responses to Climate Change

NASA Astrophysics Data System (ADS)

Ettinger, A.; Wolkovich, E. M.; Joly, S.

2016-12-01

Rising global temperatures are expected to cause large-scale changes to forests, including altered mortality and recruitment rates, and dramatic changes in species composition, but exactly how tree growth will be affected by climate change is uncertain. Studies to date suggest that temperate and boreal tree responses to warming range from growing faster, slower, or at unchanged rates. Here we present an approach and preliminary findings that will improve predictions of tree responses to climate change by studying how tree traits, including phenology (e.g. the timing of leaf-out), wood density, leaf mass area, and height, relate to climate sensitivity (i.e. growth responses to annual changes in climate, Figure 1). We demonstrate how arboreta can be used to understand tree responses to climate change using 500 individuals across 65 tree species growing at the Arnold Arboretum, Boston, Massachusetts. Arboretum provide a unique opportunities for understanding temperate tree responses to climate change: they provide large collections of woody species growing together that enable traits to be studied across diverse species in a phylogenetic context. Furthermore, many species in arboreta are nonnative and have been exposed to "novel" climates that may resemble future conditions in their native distributions. We use a phylogenetic approach to understand how annual growth and climate sensitivity relate to focal traits, and asses what these findings may tell us about tree responses to climate change.

Comparing Individual Tree Segmentation Based on High Resolution Multispectral Image and Lidar Data

NASA Astrophysics Data System (ADS)

Xiao, P.; Kelly, M.; Guo, Q.

2014-12-01

This study compares the use of high-resolution multispectral WorldView images and high density Lidar data for individual tree segmentation. The application focuses on coniferous and deciduous forests in the Sierra Nevada Mountains. The tree objects are obtained in two ways: a hybrid region-merging segmentation method with multispectral images, and a top-down and bottom-up region-growing method with Lidar data. The hybrid region-merging method is used to segment individual tree from multispectral images. It integrates the advantages of global-oriented and local-oriented region-merging strategies into a unified framework. The globally most-similar pair of regions is used to determine the starting point of a growing region. The merging iterations are constrained within the local vicinity, thus the segmentation is accelerated and can reflect the local context. The top-down region-growing method is adopted in coniferous forest to delineate individual tree from Lidar data. It exploits the spacing between the tops of trees to identify and group points into a single tree based on simple rules of proximity and likely tree shape. The bottom-up region-growing method based on the intensity and 3D structure of Lidar data is applied in deciduous forest. It segments tree trunks based on the intensity and topological relationships of the points, and then allocate other points to exact tree crowns according to distance. The accuracies for each method are evaluated with field survey data in several test sites, covering dense and sparse canopy. Three types of segmentation results are produced: true positive represents a correctly segmented individual tree, false negative represents a tree that is not detected and assigned to a nearby tree, and false positive represents that a point or pixel cluster is segmented as a tree that does not in fact exist. They respectively represent correct-, under-, and over-segmentation. Three types of index are compared for segmenting individual tree from multispectral image and Lidar data: recall, precision and F-score. This work explores the tradeoff between the expensive Lidar data and inexpensive multispectral image. The conclusion will guide the optimal data selection in different density canopy areas for individual tree segmentation, and contribute to the field of forest remote sensing.

Effects of a clear-cut harvest on soil respiration in a jack pine - Lichen woodland

USGS Publications Warehouse

Striegl, Robert G.; Wickland, K.P.

1998-01-01

Quantification of the components of ecosystem respiration is essential to understanding carbon (C) cycling of natural and disturbed landscapes. Soil respiration, which includes autotrophic and heterotrophic respiration from throughout the soil profile, is the second largest flux in the global carbon cycle. We measured soil respiration (soil CO2 emission) at an undisturbed mature jack pine (Pinus banksiana Lamb.) stand in Saskatchewan (old jack pine, OJP), and at a formerly continuous portion of the stand that was clear-cut during the previous winter (clear-cut, CC). Tree harvesting reduced soil CO2 emission from ???22.5 to ???9.1 mol CO2??m2 for the 1994 growing season. OJP was a small net sink of atmospheric CO2, while CC was a net source of CO2. Winter emissions were similar at both sites. Reduction of soil respiration was attributed to disruption of the soil surface and to the death of tree roots. Flux simulations for CC and OJP identify 40% of CO2 emission at the undisturbed OJP site as near-surface respiration, 25% as deep-soil respiration, and 35% as tree-root respiration. The near-surface component was larger than the estimated annual C input to soil, suggesting fast C turnover and no net C accumulation in these boreal uplands in 1994.

Climate-resilient agroforestry: physiological responses to climate change and engineering of crassulacean acid metabolism (CAM) as a mitigation strategy.

PubMed

Borland, Anne M; Wullschleger, Stan D; Weston, David J; Hartwell, James; Tuskan, Gerald A; Yang, Xiaohan; Cushman, John C

2015-09-01

Global climate change threatens the sustainability of agriculture and agroforestry worldwide through increased heat, drought, surface evaporation and associated soil drying. Exposure of crops and forests to warmer and drier environments will increase leaf:air water vapour-pressure deficits (VPD), and will result in increased drought susceptibility and reduced productivity, not only in arid regions but also in tropical regions with seasonal dry periods. Fast-growing, short-rotation forestry (SRF) bioenergy crops such as poplar (Populus spp.) and willow (Salix spp.) are particularly susceptible to hydraulic failure following drought stress due to their isohydric nature and relatively high stomatal conductance. One approach to sustaining plant productivity is to improve water-use efficiency (WUE) by engineering crassulacean acid metabolism (CAM) into C3 crops. CAM improves WUE by shifting stomatal opening and primary CO2 uptake and fixation to the night-time when leaf:air VPD is low. CAM members of the tree genus Clusia exemplify the compatibility of CAM performance within tree species and highlight CAM as a mechanism to conserve water and maintain carbon uptake during drought conditions. The introduction of bioengineered CAM into SRF bioenergy trees is a potentially viable path to sustaining agroforestry production systems in the face of a globally changing climate. © 2014 John Wiley & Sons Ltd.

Demographic drivers of functional composition dynamics.

PubMed

Muscarella, Robert; Lohbeck, Madelon; Martínez-Ramos, Miguel; Poorter, Lourens; Rodríguez-Velázquez, Jorge Enrique; van Breugel, Michiel; Bongers, Frans

2017-11-01

Mechanisms of community assembly and ecosystem function are often analyzed using community-weighted mean trait values (CWMs). We present a novel conceptual framework to quantify the contribution of demographic processes (i.e., growth, recruitment, and mortality) to temporal changes in CWMs. We used this framework to analyze mechanisms of secondary succession in wet tropical forests in Mexico. Seed size increased over time, reflecting a trade-off between colonization by small seeds early in succession, to establishment by large seeds later in succession. Specific leaf area (SLA) and leaf phosphorus content decreased over time, reflecting a trade-off between fast growth early in succession vs. high survival late in succession. On average, CWM shifts were driven mainly (70%) by growth of surviving trees that comprise the bulk of standing biomass, then mortality (25%), and weakly by recruitment (5%). Trait shifts of growing and recruiting trees mirrored the CWM trait shifts, and traits of dying trees did not change during succession, indicating that these traits are important for recruitment and growth, but not for mortality, during the first 30 yr of succession. Identifying the demographic drivers of functional composition change links population dynamics to community change, and enhances insights into mechanisms of succession. © 2017 by the Ecological Society of America.

Maternal and genetic effects on broiler bone properties during incubation period.

PubMed

Yair, R; Cahaner, A; Uni, Z; Shahar, R

2017-07-01

In order to examine the differences in bone properties between fast-growing and slow-growing broiler embryos and to understand the effects of genotype and egg size on these differences, fast- and slow-growing hens and males were reciprocally crossed to create 4 egg groups: FST (laid by fast-growing hens, inseminated by fast-growing males), H-FST (fast-growing hens and slow-growing males), H-SLW (slow-growing hens and fast-growing males), and SLW (slow-growing hens and slow-growing males). Embryos (n = 8) from these 4 groups were sacrificed and weighed, and both tibiae were harvested on embryonic d (E) 17, 19, and 21. Left tibiae were tested for their whole-bone mechanical properties using a micromechanical device. Cortical bone structure and bone mineral density (BMD) were examined by micro-computed tomography of the left tibiae. Bone mineralization was evaluated by measuring BMD and ash content, while the rate and location of mineralization were evaluated by fluorochrome labeling. Osteoclastic activity and osteocyte density were evaluated by histological stains [TRAP (Tartrate resistant acid phosphatase) and H&E (Hematoxylin and Eosin), respectively]. Groups with larger eggs (FST and H-FST) had higher BW and tibia weight than groups with smaller eggs (SLW and H-SLW); however, they had a lower ratio of tibia weight to BW. Between groups with similar egg weight, stiffness, maximal load, and yield load of the bones were higher in the SLW than the H-SLW, while no differences were found between the FST and H-FST. Additionally, the tibiae of the SLW were stiffer and their osteocyte density higher than in the FST on E21 and their periosteal mineralization rate was higher between E19 and E21. No differences were found between the groups in cortical bone structure. This study demonstrates that faster growing hatchlings, especially those that hatch from relatively small eggs, have inferior bone mechanical properties in comparison to slower growing hatchlings, and suggests that fast-growing chicks hatching from small eggs are at a higher risk for developing bone pathologies. Accordingly, selection for increased egg size may lead to improved mechanical performance of the skeleton of fast-growing broilers. © 2017 Poultry Science Association Inc.

The carbon charging of pines at the climatic treeline: a global comparison.

PubMed

Hoch, Günter; Körner, Christian

2003-03-01

The carbon charging of pines across the treeline ecotone of three different climatic zones (Mexico 19 degrees N Pinus hartwegii, Swiss Alps 46 degrees N P. cembra and northern Sweden 68 degrees N P. sylvestris) was analyzed, to test whether a low-temperature-driven carbon shortage can explain high-elevation tree limits, and whether the length of the growing season affects the trees' carbon balance. We quantified the concentrations of non-structural carbohydrates (NSC) and lipids (acylglycerols) in all tree organs at three dates during the growing seasons across elevational transects from the upper end of the closed, tall forest (timberline) to the uppermost location where groups of trees > or =3 m in height occur (treeline). Mean ground temperatures during the growing season at the treelines were similar (6.1+/-0.7 degrees C) irrespective of latitude. Across the individual transects, the concentrations of NSC and lipids increased with elevation in all organs. By the end of the growing season, all three species had very similar total mobile carbon (TMC) concentrations at the treeline (ca. 6% TMC in the aboveground dry biomass), suggesting no influence of the length of the growing season on tree carbon charging. At a temperate lowland reference site P. sylvestris reached only ca. 4% TMC in the aboveground dry biomass, with the 2% difference largely explained by higher lipid concentrations of treeline pines. We conclude that carbon availability is unlikely to be the cause of the altitudinal tree limit. It seems rather that low temperatures directly affect sink activity at the treeline, with surplus carbon stored in osmotically inactive compounds.

Growing Greener Cities: Environmental Education Guide.

ERIC Educational Resources Information Center

American Forestry Association, Washington, DC.

This environmental education guide, developed by American Forests, includes five lessons created to help teachers use "Growing Greener Cities," a tree-planting handbook. The lessons are designed to teach students the role trees and forests play in cities. Lesson one begins with an introduction, several preparatory exercises to orient students to…

Planting Cottonwoods on Bottomlands

Treesearch

Henry Bull; H. H. Muntz

1943-01-01

Eastern cottonwood (Populus deltoides virginiana) is one of the fastest-growing trees of commercial importance native to this country. The wood is in demand for a great variety of uses and usually brings good stumpage prices. Rapid growth and relatively high value make cottonwood a very desirable tree to grow in plantations.

Weed Control Trials in Cottonwood Plantations

Treesearch

R. M. Krinard

1964-01-01

Weed control in the first year is essential for establishing a cottonwood plantation, for the young trees can neither survive nor grow well if they must compete with other plants. Once the light and moisture conditions are established in its favor, cottonwood becomes the fastest growing tree in the South.

Epicormic branching on hardwood trees bordering forest openings

Treesearch

G.R., Jr. Trimble; Donald W. Seegrist; Donald W. Seegrist

1973-01-01

Epicormic branching in hardwoods can degrade logs and reduce the dollar returns from growing trees. A study made around clearcut openings of various sizes showed that the following variables were related to the degree of epicormic branching on trees bordering the openings: size of opening, species, tree dominance class, exposure of tree bole, and position on tree bole...

The natural emergence of asymmetric tree-shaped pathways for cooling of a non-uniformly heated domain

NASA Astrophysics Data System (ADS)

Cetkin, Erdal; Oliani, Alessandro

2015-07-01

Here, we show that the peak temperature on a non-uniformly heated domain can be decreased by embedding a high-conductivity insert in it. The trunk of the high-conductivity insert is in contact with a heat sink. The heat is generated non-uniformly throughout the domain or concentrated in a square spot of length scale 0.1 L0, where L0 is the length scale of the non-uniformly heated domain. Peak and average temperatures are affected by the volume fraction of the high-conductivity material and by the shape of the high-conductivity pathways. This paper uncovers how varying the shape of the symmetric and asymmetric high-conductivity trees affects the overall thermal conductance of the heat generating domain. The tree-shaped high-conductivity inserts tend to grow toward where the heat generation is concentrated in order to minimize the peak temperature, i.e., in order to minimize the resistances to the heat flow. This behaviour of high-conductivity trees is alike with the root growth of the plants and trees. They also tend to grow towards sunlight, and their roots tend to grow towards water and nutrients. This paper uncovers the similarity between biological trees and high-conductivity trees, which is that trees should grow asymmetrically when the boundary conditions are non-uniform. We show here even though all the trees have the same objectives (minimum flow resistance), their shape should not be the same because of the variation in boundary conditions. To sum up, this paper shows that there is a high-conductivity tree design corresponding to minimum peak temperature with fixed constraints and conditions. This result is in accord with the constructal law which states that there should be an optimal design for a given set of conditions and constraints, and this design should be morphed in order to ensure minimum flow resistances as conditions and constraints change.

Effect of tree nuts on glycemic control in diabetes: a systematic review and meta-analysis of randomized controlled dietary trials.

PubMed

Viguiliouk, Effie; Kendall, Cyril W C; Blanco Mejia, Sonia; Cozma, Adrian I; Ha, Vanessa; Mirrahimi, Arash; Jayalath, Viranda H; Augustin, Livia S A; Chiavaroli, Laura; Leiter, Lawrence A; de Souza, Russell J; Jenkins, David J A; Sievenpiper, John L

2014-01-01

Tree nut consumption has been associated with reduced diabetes risk, however, results from randomized trials on glycemic control have been inconsistent. To provide better evidence for diabetes guidelines development, we conducted a systematic review and meta-analysis of randomized controlled trials to assess the effects of tree nuts on markers of glycemic control in individuals with diabetes. MEDLINE, EMBASE, CINAHL, and Cochrane databases through 6 April 2014. Randomized controlled trials ≥3 weeks conducted in individuals with diabetes that compare the effect of diets emphasizing tree nuts to isocaloric diets without tree nuts on HbA1c, fasting glucose, fasting insulin, and HOMA-IR. Two independent reviewer's extracted relevant data and assessed study quality and risk of bias. Data were pooled by the generic inverse variance method and expressed as mean differences (MD) with 95% CI's. Heterogeneity was assessed (Cochran Q-statistic) and quantified (I2). Twelve trials (n = 450) were included. Diets emphasizing tree nuts at a median dose of 56 g/d significantly lowered HbA1c (MD = -0.07% [95% CI:-0.10, -0.03%]; P = 0.0003) and fasting glucose (MD = -0.15 mmol/L [95% CI: -0.27, -0.02 mmol/L]; P = 0.03) compared with control diets. No significant treatment effects were observed for fasting insulin and HOMA-IR, however the direction of effect favoured tree nuts. Majority of trials were of short duration and poor quality. Pooled analyses show that tree nuts improve glycemic control in individuals with type 2 diabetes, supporting their inclusion in a healthy diet. Owing to the uncertainties in our analyses there is a need for longer, higher quality trials with a focus on using nuts to displace high-glycemic index carbohydrates. ClinicalTrials.gov NCT01630980.

Effect of Tree Nuts on Glycemic Control in Diabetes: A Systematic Review and Meta-Analysis of Randomized Controlled Dietary Trials

PubMed Central

Viguiliouk, Effie; Kendall, Cyril W. C.; Blanco Mejia, Sonia; Cozma, Adrian I.; Ha, Vanessa; Mirrahimi, Arash; Jayalath, Viranda H.; Augustin, Livia S. A.; Chiavaroli, Laura; Leiter, Lawrence A.; de Souza, Russell J.; Jenkins, David J. A.; Sievenpiper, John L.

2014-01-01

Background Tree nut consumption has been associated with reduced diabetes risk, however, results from randomized trials on glycemic control have been inconsistent. Objective To provide better evidence for diabetes guidelines development, we conducted a systematic review and meta-analysis of randomized controlled trials to assess the effects of tree nuts on markers of glycemic control in individuals with diabetes. Data Sources MEDLINE, EMBASE, CINAHL, and Cochrane databases through 6 April 2014. Study Selection Randomized controlled trials ≥3 weeks conducted in individuals with diabetes that compare the effect of diets emphasizing tree nuts to isocaloric diets without tree nuts on HbA1c, fasting glucose, fasting insulin, and HOMA-IR. Data Extraction and Synthesis Two independent reviewer’s extracted relevant data and assessed study quality and risk of bias. Data were pooled by the generic inverse variance method and expressed as mean differences (MD) with 95% CI’s. Heterogeneity was assessed (Cochran Q-statistic) and quantified (I2). Results Twelve trials (n = 450) were included. Diets emphasizing tree nuts at a median dose of 56 g/d significantly lowered HbA1c (MD = −0.07% [95% CI:−0.10, −0.03%]; P = 0.0003) and fasting glucose (MD = −0.15 mmol/L [95% CI: −0.27, −0.02 mmol/L]; P = 0.03) compared with control diets. No significant treatment effects were observed for fasting insulin and HOMA-IR, however the direction of effect favoured tree nuts. Limitations Majority of trials were of short duration and poor quality. Conclusions Pooled analyses show that tree nuts improve glycemic control in individuals with type 2 diabetes, supporting their inclusion in a healthy diet. Owing to the uncertainties in our analyses there is a need for longer, higher quality trials with a focus on using nuts to displace high-glycemic index carbohydrates. Trial Registration ClinicalTrials.gov NCT01630980 PMID:25076495

ECOPASS - a multivariate model used as an index of growth performance of poplar clones

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ceulemans, R.; Impens, I.

The model (ECOlogical PASSport) reported was constructed by principal component analysis from a combination of biochemical, anatomical/morphological and ecophysiological gas exchange parameters measured on 5 fast growing poplar clones. Productivity data were 10 selected trees in 3 plantations in Belgium and given as m.a.i.(b.a.). The model is shown to be able to reflect not only genetic origin and the relative effects of the different parameters of the clones, but also their production potential. Multiple regression analysis of the 4 principal components showed a high cumulative correlation (96%) between the 3 components related to ecophysiological, biochemical and morphological parameters, and productivity;more » the ecophysiological component alone correlated 85% with productivity.« less

Elevated atmospheric CO₂ mitigated photoinhibition in a tropical tree species, Gmelina arborea.

PubMed

Rasineni, Girish Kumar; Guha, Anirban; Reddy, Attipalli Ramachandra

2011-05-03

Effects of elevated CO₂ on photosynthetic CO₂ assimilation, PSII photochemistry and photoinhibition were investigated in the leaves of a fast growing tropical tree species, Gmelina arborea (Verbenaceae) during summer days of peak growth season under natural light. Elevated CO₂ had a significant effect on CO₂ assimilation rates and maximal efficiency of PSII photochemistry. Chlorophyll a fluorescence induction kinetics were measured to determine the influence of elevated CO₂ on PSII efficiency. During midday, elevated CO₂-grown Gmelina showed significantly higher net photosynthesis (p<0.001) and greater F(V)/F(M) (p<0.001) than those grown under ambient CO₂. The impact of elevated CO₂ on photosynthetic rates and Chl a fluorescence were more pronounced during midday depression where the impact of high irradiance decreased in plants grown under elevated CO₂ compared to ambient CO₂-grown plants. Our results clearly demonstrate that decreased susceptibility to photoinhibition in elevated CO₂ grown plants was associated with increased accumulation of active PSII reaction centers and efficient photochemical quenching. We conclude that elevated CO₂ treatment resulted in easy diminution of midday photosynthetic depression. Copyright © 2011 Elsevier B.V. All rights reserved.

29 CFR 780.208 - Forest and Christmas tree activities.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 29 Labor 3 2010-07-01 2010-07-01 false Forest and Christmas tree activities. 780.208 Section 780... Christmas tree activities. Operations in a forest tree nursery such as seeding new beds and growing and transplanting forest seedlings are not farming operations. The planting, tending, and cutting of Christmas trees...

29 CFR 780.208 - Forest and Christmas tree activities.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 29 Labor 3 2013-07-01 2013-07-01 false Forest and Christmas tree activities. 780.208 Section 780... Christmas tree activities. Operations in a forest tree nursery such as seeding new beds and growing and transplanting forest seedlings are not farming operations. The planting, tending, and cutting of Christmas trees...

29 CFR 780.208 - Forest and Christmas tree activities.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 29 Labor 3 2011-07-01 2011-07-01 false Forest and Christmas tree activities. 780.208 Section 780... Christmas tree activities. Operations in a forest tree nursery such as seeding new beds and growing and transplanting forest seedlings are not farming operations. The planting, tending, and cutting of Christmas trees...

29 CFR 780.208 - Forest and Christmas tree activities.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 29 Labor 3 2014-07-01 2014-07-01 false Forest and Christmas tree activities. 780.208 Section 780... Christmas tree activities. Operations in a forest tree nursery such as seeding new beds and growing and transplanting forest seedlings are not farming operations. The planting, tending, and cutting of Christmas trees...

29 CFR 780.208 - Forest and Christmas tree activities.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 29 Labor 3 2012-07-01 2012-07-01 false Forest and Christmas tree activities. 780.208 Section 780... Christmas tree activities. Operations in a forest tree nursery such as seeding new beds and growing and transplanting forest seedlings are not farming operations. The planting, tending, and cutting of Christmas trees...

Keeping trees as assets

Treesearch

Kevin T. Smith

2009-01-01

Landscape trees have real value and contribute to making livable communities. Making the most of that value requires providing trees with the proper care and attention. As potentially large and long-lived organisms, trees benefit from commitment to regular care that respects the natural tree system. This system captures, transforms, and uses energy to survive, grow,...

Pocket guide to Christmas tree diseases

Treesearch

Thomas H. Nicholls; Robert D. Wray

1989-01-01

Each year more than 30 million American families bring a live Christmas tree into their homes to become the warm and glowing center of their Christmas celebration. Years ago, most Christmas trees were cut wild. But, as demand increased and the supply of suitable wild trees decreased, growing Christmas trees in plantations became more and more common.

Video data of flowers, fruitlets, and fruit in apple trees during the 2017 growing season at USDA-ARS-AFRS

USDA-ARS?s Scientific Manuscript database

This record contains videos of apple trees acquired from a ground vehicle throughout the growing season at the USDA-ARS, Appalachian Fruit Research Station. Research in precision management methods in orchard crops revolve around locating objects of interest, namely flowers, fruitlets, and fruit, a...

Do People Grow on Family Trees? Genealogy for Kids & Other Beginners. Teacher's Guide.

ERIC Educational Resources Information Center

Wolfman, Ira

This teacher's guide to "Do People Grow on Family Trees?" provides the classroom teacher with thought-provoking discussion topics and questions and curriculum-enhancing activities. It presents objective-based, action learning strategies that involve students in the following: simulation situations that lead to problem solving and other…

Survival and Growth of Eastern Redcedar Seed Sources in Southwest Missouri

Treesearch

Kenneth W. Seidel; Richard F. Watt

1969-01-01

After five growing seasons on a southwest Missouri outplanting site, trees from a West Virginia eastern redcedar source had better survival, form, vigor, and height growth than trees from eight other sources tested. The local Missouri source, handicapped at planting by an unfavorable top:root ration, is now growing vigorously.

A fast bottom-up algorithm for computing the cut sets of noncoherent fault trees

DOE Office of Scientific and Technical Information (OSTI.GOV)

Corynen, G.C.

1987-11-01

An efficient procedure for finding the cut sets of large fault trees has been developed. Designed to address coherent or noncoherent systems, dependent events, shared or common-cause events, the method - called SHORTCUT - is based on a fast algorithm for transforming a noncoherent tree into a quasi-coherent tree (COHERE), and on a new algorithm for reducing cut sets (SUBSET). To assure sufficient clarity and precision, the procedure is discussed in the language of simple sets, which is also developed in this report. Although the new method has not yet been fully implemented on the computer, we report theoretical worst-casemore » estimates of its computational complexity. 12 refs., 10 figs.« less

CO2 enrichment alters diurnal stem radius fluctuations of 36-yr-old Larix decidua growing at the alpine tree line.

PubMed

Dawes, Melissa A; Zweifel, Roman; Dawes, Nicholas; Rixen, Christian; Hagedorn, Frank

2014-06-01

To understand how trees at high elevations might use water differently in the future, we investigated the effects of CO2 enrichment and soil warming (separately and combined) on the water relations of Larix decidua growing at the tree line in the Swiss Alps. We assessed diurnal stem radius fluctuations using point dendrometers and applied a hydraulic plant model using microclimate and soil water potential data as inputs. Trees exposed to CO2 enrichment for 9 yr showed smaller diurnal stem radius contractions (by 46 ± 16%) and expansions (42 ± 16%) compared with trees exposed to ambient CO2 . Additionally, there was a delay in the timing of daily maximum (40 ± 12 min) and minimum (63 ± 14 min) radius values for trees growing under elevated CO2 . Parameters optimized with the hydraulic model suggested that CO2 -enriched trees had an increased flow resistance between the xylem and bark, representing a more buffered water supply system. Soil warming did not alter diurnal fluctuation dynamics or the CO2 response. Elevated CO2 altered the hydraulic water flow and storage system within L. decidua trees, which might have contributed to enhanced growth during 9 yr of CO2 enrichment and could ultimately influence the future competitive ability of this key tree-line species. © 2014 WSL Institute for Snow and Avalanche Research - SLF. New Phytologist © 2014 New Phytologist Trust.

Trade-Offs between Growth Rate, Tree Size and Lifespan of Mountain Pine (Pinus montana) in the Swiss National Park

PubMed Central

Bigler, Christof

2016-01-01

A within-species trade-off between growth rates and lifespan has been observed across different taxa of trees, however, there is some uncertainty whether this trade-off also applies to shade-intolerant tree species. The main objective of this study was to investigate the relationships between radial growth, tree size and lifespan of shade-intolerant mountain pines. For 200 dead standing mountain pines (Pinus montana) located along gradients of aspect, slope steepness and elevation in the Swiss National Park, radial annual growth rates and lifespan were reconstructed. While early growth (i.e. mean tree-ring width over the first 50 years) correlated positively with diameter at the time of tree death, a negative correlation resulted with lifespan, i.e. rapidly growing mountain pines face a trade-off between reaching a large diameter at the cost of early tree death. Slowly growing mountain pines may reach a large diameter and a long lifespan, but risk to die young at a small size. Early growth was not correlated with temperature or precipitation over the growing period. Variability in lifespan was further contingent on aspect, slope steepness and elevation. The shade-intolerant mountain pines follow diverging growth trajectories that are imposed by extrinsic environmental influences. The resulting trade-offs between growth rate, tree size and lifespan advance our understanding of tree population dynamics, which may ultimately improve projections of forest dynamics under changing environmental conditions. PMID:26930294

Historical early stem development of northern white-cedar (Thuja occidentalis L.) in Maine

Treesearch

Philip V. Hofmeyer; Laura S. Kenefic; Robert S. Seymour

2010-01-01

We used stem analysis to quantify early height and diameter growth rates of 80 northern white-cedar trees (17.4-55.0 cm dbh) harvested in 2005 and 2006 in central and northern Maine. It took an average of 42 years (range, 9-86 years) for sampled trees to grow from stump height to sapling size, 96 years to grow to pole size (range, 28-171), 140 years to grow to...

Climate change accelerates growth of urban trees in metropolises worldwide.

PubMed

Pretzsch, Hans; Biber, Peter; Uhl, Enno; Dahlhausen, Jens; Schütze, Gerhard; Perkins, Diana; Rötzer, Thomas; Caldentey, Juan; Koike, Takayoshi; Con, Tran van; Chavanne, Aurélia; Toit, Ben du; Foster, Keith; Lefer, Barry

2017-11-13

Despite the importance of urban trees, their growth reaction to climate change and to the urban heat island effect has not yet been investigated with an international scope. While we are well informed about forest growth under recent conditions, it is unclear if this knowledge can be simply transferred to urban environments. Based on tree ring analyses in ten metropolises worldwide, we show that, in general, urban trees have undergone accelerated growth since the 1960s. In addition, urban trees tend to grow more quickly than their counterparts in the rural surroundings. However, our analysis shows that climate change seems to enhance the growth of rural trees more than that of urban trees. The benefits of growing in an urban environment seem to outweigh known negative effects, however, accelerated growth may also mean more rapid ageing and shortened lifetime. Thus, city planners should adapt to the changed dynamics in order to secure the ecosystem services provided by urban trees.

Short-term effects of light quality on leaf gas exchange and hydraulic properties of silver birch (Betula pendula).

PubMed

Niglas, Aigar; Papp, Kaisa; Sekiewicz, Maciej; Sellin, Arne

2017-09-01

Leaves have to acclimatize to heterogeneous radiation fields inside forest canopies in order to efficiently exploit diverse light conditions. Short-term effects of light quality on photosynthetic gas exchange, leaf water use and hydraulic traits were studied on Betula pendula Roth shoots cut from upper and lower thirds of the canopy of 39- to 35-year-old trees growing in natural forest stand, and illuminated with white, red or blue light in the laboratory. Photosynthetic machinery of the leaves developed in different spectral conditions acclimated differently with respect to incident light spectrum: the stimulating effect of complete visible spectrum (white light) on net photosynthesis is more pronounced in upper-canopy layers. Upper-canopy leaves exhibit less water saving behaviour, which may be beneficial for the fast-growing pioneer species on a daily basis. Lower-canopy leaves have lower stomatal conductance resulting in more efficient water use. Spectral gradients existing within natural forest stands represent signals for the fine-tuning of stomatal conductance and tree water relations to afford lavish water use in sun foliage and enhance leaf water-use efficiency in shade foliage sustaining greater hydraulic limitations. Higher sensitivity of hydraulic conductance of shade leaves to blue light probably contributes to the efficient use of short duration sunflecks by lower-canopy leaves. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Maritime Coastlines: A New Ecosystem for Dendrochronological Analysis

NASA Astrophysics Data System (ADS)

Tucker, C. S.; Trepanier, J. C.; Harley, G. L.; DeLong, K. L.

2017-12-01

Research at the forefront of dendrochronology is investigating the usefulness of coastal tree-ring chronologies as climatic and environmental proxies. We hypothesize trees growing on the margin of freshwater-brackish environments are sensitive to climate variability similar to those in other climatically stressed regions (e.g., the arid Southwest U.S.) and can be used for dendrochronological analyses. This study explores rings from Pinus elliottii var. elliottii trees in the Grand Bay National Estuarine Research Reserve (GBNERR) growing less than 2 km from the Gulf of Mexico. Interseries correlations (r=0.68, p<0.01) and average mean sensitivities (r=0.57, p<0.01) for these trees are higher than most Southeast U.S. tree-ring studies. P. elliottii growth in this study is significantly correlated to Standardized Precipitation-Evapotranspiration Index (SPEI; r=0.5, p<0.05) during this species' growing season (May-October). Though precipitation and temperatures in the region are favorable for tree growth, coastal processes (e.g., saltwater intrusion, brackish groundwater, aerosolized salt) are substantial regulators of growth to the maritime trees at GBNERR, which makes individuals sensitive to climate variability. Significant correlations with pressure regimes during these trees' growing season suggest that as pressure decreases over the northern Gulf of Mexico coast, thus producing precipitation, pressure increases over the Caribbean. Previous research proposes that the Central U.S. receives important precipitation sources from the Caribbean through the `Maya Express', and our results show that this precipitation may also be important to northern Gulf of Mexico coastal ecosystems. P. elliottii growth in this study is significantly correlated to tropical cyclone storm surge and is not significantly correlated to tropical cyclone high winds, which supports other studies' hypotheses that Pinus spp. are susceptible to saltwater intrusion and not high winds. Additionally, growth in trees rebounds to above average following years of tropical cyclone induced growth suppressions, and the largest storm surges cause the largest suppressions in growth, thus supporting the Intermediate Disturbance Hypothesis.

Deciphering structural and temporal interplays during the architectural development of mango trees.

PubMed

Dambreville, Anaëlle; Lauri, Pierre-Éric; Trottier, Catherine; Guédon, Yann; Normand, Frédéric

2013-05-01

Plant architecture is commonly defined by the adjacency of organs within the structure and their properties. Few studies consider the effect of endogenous temporal factors, namely phenological factors, on the establishment of plant architecture. This study hypothesized that, in addition to the effect of environmental factors, the observed plant architecture results from both endogenous structural and temporal components, and their interplays. Mango tree, which is characterized by strong phenological asynchronisms within and between trees and by repeated vegetative and reproductive flushes during a growing cycle, was chosen as a plant model. During two consecutive growing cycles, this study described vegetative and reproductive development of 20 trees submitted to the same environmental conditions. Four mango cultivars were considered to assess possible cultivar-specific patterns. Integrative vegetative and reproductive development models incorporating generalized linear models as components were built. These models described the occurrence, intensity, and timing of vegetative and reproductive development at the growth unit scale. This study showed significant interplays between structural and temporal components of plant architectural development at two temporal scales. Within a growing cycle, earliness of bud burst was highly and positively related to earliness of vegetative development and flowering. Between growing cycles, flowering growth units delayed vegetative development compared to growth units that did not flower. These interplays explained how vegetative and reproductive phenological asynchronisms within and between trees were generated and maintained. It is suggested that causation networks involving structural and temporal components may give rise to contrasted tree architectures.

Removal of Competition Bias from Forest Genetics Experiments

Treesearch

D. T. Cooper; Robert B. Ferguson

1977-01-01

Estimates of genetic gains and of juvenile-mature correlations in small-plot breeding experiments may be inflated because trees that grow rapidly early continue to be the largest trees, and trees that begin slowly usually stay small. A procedure which takes missing trees, relative sizes and distances between competing trees, and the intensity of competition into...

Visualization of time-varying natural tree data

Treesearch

S. Brasch; L. Linsen; E.G. McPherson

2007-01-01

Given a set of global (natural) tree parameters measured for many specimens of different ages for a range of species, we have developed a tool that visualizes these parameters over time. The parameters include measures of tree dimensions like heights, diameters, and crown shape, and measures of costs and benefits for growing the tree. We visualize the tree dimensions...

Implications of soil heterogeneity on growth performance of fast-growing trees under marginal site conditions - an ecophysiological perspective

NASA Astrophysics Data System (ADS)

Veste, Maik; Halke, Christian; Schmitt, Dieter; Mantovani, Dario; Zimmermann, Reiner; Küppers, Manfred; Freese, Dirk

2017-04-01

The integration of fast-growing trees and hedgerows has been proposed in order to improve the environmental performance of agricultural systems and to provide woody biomass for bioenergy. Due to the current increase of bioenergy, strong interests are emerging to use marginal lands for short-rotation forestry. Especially in Lower Lusatia (Brandenburg, Germany) large areas of reclaimed post-mining sites are available for the cultivation of short-rotation coppies and agroforesty systems. The dumped overburden material has little or no recent soil organic matter, low nutrient content and low water holding capacity. Our study aim was to evaluate the effects of small-scale spatial and temporal variations of edaphic conditions on plant water relations, photosynthesis and biomass production of black locust (Robinia pseudoacacia) and poplar (Populus spp.) on marginal lands. Particularly, on dumped soils in the post-mining area, due to the adverse edaphic conditions, the stem growth was drastically reduced during summer drought below the critical pre-dawn water potential value of -0.5 MPa. But also on agricultural fields soil depth and soil water availability are the key factors determining the biomass production of poplar and black locust. A reduction of soil N availability as a result of low soil nitrogen content or drought induce nodulation and biological nitrogen fixation (BNF) in Robinia in order to sustain the required nitrogen amounts for plant growth. In our experiment the nodule biomass increased in combination with a decrease of the δ15N values of the leaves under extreme drought stress. Under field conditions the percentage of nitrogen derived from the atmosphere in black locust varies 63% - 83% and emphasized the importance of nitrogen fixations for tree growth on marginal lands. Our investigation under different edaphic conditions and soil water availabilities showed clearly the ecophysiological and morphological plasticity of the investigated tree species and its implication for growth and biomass production. References Mantovani D, Veste M, Böhm C, Vignudelli M, Freese D, 2015. Drought impact on the spatial and temporal variation of growth performance and plant water status of black locust (Robinia pseudoacacia L.) in agroforestry systems in Lower Lusatia (Germany). iForest 8 743-757 Mantovani D, Veste M, Boldt-Burisch K, Fritsch S, Koning L, Freese D, 2015. Carbon allocation, nodulation, and biological nitrogen fixation of black locust (Robinia pseudoacacia L.) under soil water limitation. Annals of Forestry Research 58 (2), 259-274. Veste M, Staudinger M, Küppers M 2008. Spatial and temporal variability of soil water in drylands: plant water potential as a diagnostic tool. Forestry Studies in China 10(2), 74-80

Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?

PubMed

Barazani, Oz; Keren-Keiserman, Alexandra; Westberg, Erik; Hanin, Nir; Dag, Arnon; Ben-Ari, Giora; Fragman-Sapir, Ori; Tugendhaft, Yizhar; Kerem, Zohar; Kadereit, Joachim W

2016-12-13

Naturally growing populations of olive trees are found in the Mediterranean garrigue and maquis in Israel. Here, we used the Simple Sequence Repeat (SSR) genetic marker technique to investigate whether these represent wild var. sylvestris. Leaf samples were collected from a total of 205 trees at six sites of naturally growing olive populations in Israel. The genetic analysis included a multi-locus lineage (MLL) analysis, Rousset's genetic distances, Fst values, private alleles, other diversity values and a Structure analysis. The analyses also included scions and suckers of old cultivated olive trees, for which the dominance of one clone in scions (MLL1) and a second in suckers (MLL7) had been shown earlier. The majority of trees from a Judean Mts. population and from one population from the Galilee showed close genetic similarity to scions of old cultivated trees. Different from that, site-specific and a high number of single occurrence MLLs were found in four olive populations from the Galilee and Carmel which also were genetically more distant from old cultivated trees, had relatively high genetic diversity values and higher numbers of private alleles. Whereas in two of these populations MLL7 (and partly MLL1) were found in low frequency, the two other populations did not contain these MLLs and were very similar in their genetic structure to suckers of old cultivated olive trees that originated from sexual reproduction. The genetic distinctness from old cultivated olive trees, particularly of one population from Galilee and one from Carmel, suggests that trees at these sites might represent wild var. sylvestris. The similarity in genetic structure of these two populations with the suckers of old cultivated trees implies that wild trees were used as rootstocks. Alternatively, trees at these two sites may be remnants of old cultivated trees in which the scion-derived trunk died and was replaced by suckers. However, considering landscape and topographic environment at the two sites this second interpretation is less likely.

Tree health and physiology in a changing environment

Treesearch

Walter C. Shortle; Kevin T. Smith; Rakesh Minocha; Subhash Minocha; Philip M. Wargo; Kristina A. Vogt

2000-01-01

A tree is a large, long-lived, perennial, compartmented, woody, shedding, walling plant. This definition is based on new tree biology concepts (Shigo, 1986a,b, 1991) and explains much about how mature trees function through their unique structure. When the tree begins its life, it is mostly leaf in mass (Fig. 7.la). As a tree grows in stature, it becomes mostly stem in...

Growing trees where trees grow best: short-term research sheds light on long-term productivity.

Treesearch

Jonathan Thompson

2008-01-01

In 1999, the Fall River Long-Term Site Productivity study began in coastal Washington to investigate how intensive management practices affect soil processes and forest productivity. By comparing conventional harvests to more intensive wood removal treatments, researchers are answering long-standing questions about how residual organic matter influences future growth....

Trends in timber use and product recovery in Pennsylvania, 1966-1977

Treesearch

Eric H. Wharton; James T. Bones

1980-01-01

Repeated timber utilization studies in Pennsylvania suggest that the recovery of growing-stock timber has improved over the years. Currently 95 percent of the inventory growing stock volume is being recovered from harvested trees. There are many opportunities to recover additional amounts of biomass from nongrowing-stock trees and logging residues. Until recently,...

Historical aspects of somatic embryogenesis in woody plants

Treesearch

Subhash C. Minocha; Rakesh Minocha

1995-01-01

During the next few decades, the world demand for wood products is expected to rise sharply. To meet this growing demand, there will be an increasing need for mass production of improved-quality planting stock of many tree species. The conventional methods of tree improvement and selection offer only limited possibility of meeting the growing demands. Therefore, new...

Planning the future's forests with assisted migration [Chapter 8

Treesearch

Mary I. Williams; R. Kasten Dumroese

2016-01-01

If the climate changes faster than the adaptation or migration capability of plants (Zhu et al. 2012; Gray and Hamann 2013), foresters and other land managers will face an overwhelming challenge. Growing trees that survive may become more important than growing perfectly formed trees (Hebda 2008) and may require selection of adapted plant materials and/or assisting the...

Tree biomass in the North Central Region.

Treesearch

Gerhard K. Raile; Pamela J. Jakes

1982-01-01

Methods for calculating tree biomass are outlined, and the biomass on commercial forest land is estimated for 11 north-central states. Tree biomass in the North Central Region totals 3.6 billion tons, or 50 tons per commercial forest acre. For all species, total tree biomass is concentrated in growing-stock boles.

The variation of methane flux rates from boreal tree species at the beginning of the growing season

NASA Astrophysics Data System (ADS)

Haikarainen, Iikka; Halmeenmäki, Elisa; Machacova, Katerina; Pihlatie, Mari

2016-04-01

Boreal forests are considered as net sink for atmospheric methane (CH4) because of the CH4 oxidizing bacteria in the aerobic soil layer. However, within the last decades it has become more evident that trees play an important role in the global CH4 budget by offering pathways for anaerobically produced CH4 from deeper soil layers to the atmosphere. Furthermore, trees may also act as independent sources of CH4. To confirm magnitude, variability and the origin of the tree mediated CH4 emissions more research is needed, especially in boreal forests which have been in a minority in such investigation. We measured tree stem and shoot CH4 exchange of three boreal tree species at the beginning of the growing season (13.4.-13.6.2015) at SMEAR II station in Hyytiälä, located in southern Finland (61° 51'N, 24° 17'E, 181 asl). The fluxes were measured from silver birch (Betula pendula), downy birch (B. pubescens) and Norway spruce (Picea abies) on two sites with differing soil type and characteristics (paludified and mineral soil), vegetation and forest structure by using the static chamber technique. Scaffold towers were used for measurements at multiple stem heights and shoots. The aim was to study the vertical profile of CH4 fluxes at stem and shoot level and compare these fluxes among the studied species, and to observe temporal changes in CH4 flux over the beginning of the growing season. We found that all the trees emitted CH4 from their stems and shoots. Overall, the birches showed higher emissions compared to the spruces. The emission rates were considerably larger in the lower parts of the birch stems than upper parts, and these emissions increased during the growing season. The spruces had more variation in the stem CH4 flux, but the emission rates of the upper parts of the stem exceeded the birch emissions at the same height. The shoot fluxes of all the studied trees indicated variable CH4 emissions without a clear pattern regarding the vertical profile and progress of the growing season.

Response patterns in adult forest trees to chronic ozone stress: identification of variations and consistencies.

PubMed

Nunn, Angela J; Reiter, Ilja M; Häberle, Karl-Heinz; Langebartels, Christian; Bahnweg, Günther; Pretzsch, Hans; Sandermann, Heinrich; Matyssek, Rainer

2005-08-01

The responsiveness of adult beech and spruce trees to chronic O(3) stress was studied at a free-air O(3) exposure experiment in Freising/Germany. Over three growing seasons, gas exchange characteristics, biochemical parameters, macroscopic O(3) injury and the phenology of leaf organs were investigated, along with assessments of branch and stem growth as indications of tree performance. To assess response pattern to chronic O(3) stress in adult forest trees, we introduce a new evaluation approach, which provides a comprehensive, readily accomplishable overview across several tree-internal scaling levels, different canopy regions and growing seasons. This new approach, based on a three-grade colour coding, combines statistical analysis and the proficient ability of the "human eye" in pattern recognition.

Crown condition dynamics of oak in southern Sweden 1988-1999.

PubMed

Drobyshev, Igor; Anderson, Stefan; Sonesson, Kerstin

2007-11-01

Crown defoliation of oak (Quercus robur and Q. petraea) was analysed in 808 trees during three forest condition surveys (1988, 1993, and 1999) in the southern Sweden. From 1988 to 1999 crown defoliation increased by more than 20%. Changes in crown defoliation were related to the pH in the upper 20-30 cm of the mineral soils, which was closely connected to other measures of soil fertility (cation exchange capacity, CEC and C/N ratio). Trees growing on soils with a high pH (> or =4.00, in BaCl2 filtrate), high CEC and low C/N ratio had significantly lower crown defoliation than trees growing on more acid soils (pH <4.00), indicating that less favourable soil conditions may further enhance oak decline. Age did not differentiate trees with respect to crown defoliation, indicating that decline in crown condition was not due to an age-related increase in crown transparency. Considering only trees younger than 100 years, a significant interaction was observed between changes in crown defoliation and soil pH. Trees younger than 100 years old growing on more acidic soils had a greater increase in crown transparency than trees on more basic soils between 1988 and 1999. Trees > or =100 years old had significantly higher defoliation on more acidic than on more basic soils, however defoliation dynamics of these trees over 1988-99 was not related to soil acidity. Two biotic agents (insect and fungal leaf infections) evaluated in this study did not prove to be important drivers of defoliation dynamics.

Anatomy of the Pythagoras' Tree

ERIC Educational Resources Information Center

Teia, Luis

2016-01-01

The architecture of nature can be seen at play in a tree: no two are alike. The Pythagoras' tree behaves just as a "tree" in that the root plus the same movement repeated over and over again grows from a seed, to a plant, to a tree. In human life, this movement is termed cell division. With triples, this movement is a geometrical and…

7 CFR 160.91 - Meaning of words “pine” and “pine tree.”

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 3 2010-01-01 2010-01-01 false Meaning of words âpineâ and âpine tree.â 160.91...” and “pine tree.” The words “pine” or “pine tree,” when used to designate the source of spirits of..., growing trees, the source of gum spirits of turpentine. ...

7 CFR 160.91 - Meaning of words “pine” and “pine tree.”

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 3 2011-01-01 2011-01-01 false Meaning of words âpineâ and âpine tree.â 160.91...” and “pine tree.” The words “pine” or “pine tree,” when used to designate the source of spirits of..., growing trees, the source of gum spirits of turpentine. ...

7 CFR 160.91 - Meaning of words “pine” and “pine tree.”

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 3 2012-01-01 2012-01-01 false Meaning of words âpineâ and âpine tree.â 160.91...” and “pine tree.” The words “pine” or “pine tree,” when used to designate the source of spirits of..., growing trees, the source of gum spirits of turpentine. ...

7 CFR 160.91 - Meaning of words “pine” and “pine tree.”

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 3 2014-01-01 2014-01-01 false Meaning of words âpineâ and âpine tree.â 160.91...” and “pine tree.” The words “pine” or “pine tree,” when used to designate the source of spirits of..., growing trees, the source of gum spirits of turpentine. ...

7 CFR 160.91 - Meaning of words “pine” and “pine tree.”

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 3 2013-01-01 2013-01-01 false Meaning of words âpineâ and âpine tree.â 160.91...” and “pine tree.” The words “pine” or “pine tree,” when used to designate the source of spirits of..., growing trees, the source of gum spirits of turpentine. ...

Dominant clonal Eucalyptus grandis x urophylla trees use water more efficiently

Treesearch

Marina Shinkai Gentil Otto; Robert M. Hubbard; Dan Binkley; Jose Luis Stape

2014-01-01

Wood growth in trees depends on the acquisition of resources, and can vary with tree size leading to a variety of stand dynamics. Typically, larger trees obtain more resources and grow faster than smaller trees, but while light has been addressed more often, few case studies have investigated the contributions of water use and water use efficiency (WUE) within stands...

Using specific volume increment (SVI) for quantifying growth responses in trees - theoretical and practical considerations

Treesearch

Eddie Bevilacqua

2002-01-01

Comparative analysis of growth responses among trees following natural or anthropogenic disturbances is often confounded when comparing trees of different size because of the high correlation between growth and initial tree size: large trees tend to have higher absolute grow rates. Relative growth rate (RGR) may not be the most suitable size-dependent measure of growth...

Attack rates of Sirex noctilio and patterns of pine tree defenses and mortality in northern Patagonia.

PubMed

Martinson, S J; Fernádez Ajó, A A; Martínez, A S; Krivak-Tetley, F E; Villacide, J M; Ayres, M P; Corley, J C

2018-04-18

Accidental and intentional global movement of species has increased the frequency of novel plant-insect interactions. In Patagonia, the European woodwasp, Sirex noctilio, has invaded commercial plantations of North American pines. We compared the patterns of resin defenses and S. noctilio-caused mortality at two mixed-species forests near San Carlos de Bariloche, Argentina. We observed lower levels of resin flow and higher levels of mortality in Pinus contorta compared with Pinus ponderosa. In general, S. noctilio attacked trees with lower resin compared with neighboring trees. Resin production in P. ponderosa was not related to growth rates, but for P. contorta, slower growing trees produced less resin than faster growing conspecifics. For all infested trees, attack density and number of drills (ovipositor probes) per attack did not vary with resin production. Most attacks resulted in one or two drills. Attack rates and drills/attack were basically uniform across the bole of the tree except for a decrease in both drills/attack and attack density in the upper portion of the crown, and an increase in the attack density for the bottom 10% of the tree. Planted pines in Patagonia grow faster than their counterparts in North America, and produce less resin, consistent with the growth-differentiation balance hypothesis. Limited resin defenses may help to explain the high susceptibility of P. contorta to woodwasps in Patagonia.

Three-year study of fast-growing trees in degraded soils amended with composts: Effects on soil fertility and productivity.

PubMed

Madejón, Paula; Alaejos, Joaquin; García-Álbala, José; Fernández, Manuel; Madejón, Engracia

2016-03-15

Currently, worries about the effects of intensive plantations on long-term nutrient supply and a loss of productivity have risen. In this study two composts were added to degraded soils where this type of intensive crops were growing, to avoid the soil fertility decrease and try to increase biomass production. For the experiment, two degraded soils in terms of low organic carbon content and low pH were selected in South-West Spain: La Rábida (RA) and Villablanca (VI) sites. Both study sites were divided into 24 plots. In RA, half of the plots were planted with Populus x canadensis "I-214"; the other half was planted with Eucalyptus globulus. At the VI site, half of the plots were planted with Paulownia fortunei, and the other plots were planted with Eucalyptus globulus. For each tree and site, three treatments were established (two organic composts and a control without compost), with four replications per treatment. The organic amendments were "alperujo" compost, AC, a solid by-product from the extraction of olive oil, and BC, biosolid compost. During the three years of experimentation, samples of soils and plants were analyzed for studying chemical and biochemical properties of soil, plant growth and plant nutritional status and biomass production. The composts increased total organic carbon, water-soluble carbon, nutrients and pH of soil only in the most acidic soil. Soil biochemical quality was calculated with the geometric mean of the enzymatic activities (Dehydrogenase, β-glucosidase, Phosphatase and Urease activities) determined in soils. The results showed a beneficial improvement in comparison with soils without compost. However, the best results were found in the growth and biomass production of the studied trees, especially in Eucalyptus. Nutritional levels of leaves of the trees were, in general, in the normal established range for each species, although no clear effect of the composts was observed. The results of this study justify the addition of compost to guarantee good biomass production and maintain or improve soil management in degraded soils, especially in acid soils. Copyright © 2015 Elsevier Ltd. All rights reserved.

Direct and Indirect Antioxidant Activity of Polyphenol- and Isothiocyanate-Enriched Fractions from Moringa oleifera

PubMed Central

Boyunegmez Tumer, Tugba; Rojas-Silva, Patricio; Poulev, Alexander; Raskin, Ilya; Waterman, Carrie

2016-01-01

Moringa oleifera Lam. is a fast-growing, tropical tree with various edible parts used as nutritious food and traditional medicine. This study describes an efficient preparatory strategy to extract and fractionate moringa leaves by fast centrifugal partition chromatography (FCPC) to produce polyphenol and isothiocyanate (ITC) rich fractions. Characterization and further purification of these fractions showed that moringa polyphenols were potent direct antioxidants assayed by oxygen radical absorbance capacity (ORAC), whereas moringa ITCs were effective indirect antioxidants assayed by induction of NAD(P)H quinone oxidoreductase 1 (NQO1) activity in Hepa1c1c7 cells. In addition, purified 4-[(α-l-rhamnosyloxy)benzyl]-isothiocyanate and 4-[(4′-O-acetyl-α-l-rhamnosyloxy)benzyl]isothiocyanate were further evaluated for their ORAC and NQO1 inducer potency in comparison with sulforaphane (SF). Both ITCs were as potent as SF in inducing NQO1 activity. These findings suggest that moringa leaves contain a potent mixture of direct and indirect antioxidants that can explain its various health-promoting effects. PMID:25605589

Pau D'Arco

MedlinePlus

Pau d'arco is a tree that grows in the Amazon rainforest and other tropical regions of South and Central America. Pau d'arco wood is dense ... name "pau d'arco" is Portuguese for "bow tree," an appropriate term considering the tree's use by ...

Nonlinearities, scale-dependence, and individualism of boreal forest trees to climate forcing

NASA Astrophysics Data System (ADS)

Wolken, J. M.; Mann, D. H.; Grant, T. A., III; Lloyd, A. H.; Hollingsworth, T. N.

2013-12-01

Our understanding of the climate-growth relationships of trees are complicated by the nonlinearity and variability of these responses through space and time. Furthermore, trees growing at the same site may exhibit opposing growth responses to climate, a phenomenon termed growth divergence. To date the majority of dendrochronological studies in Interior Alaska have involved white spruce growing at treeline, even though black spruce is the most abundant tree species. Although changing climate-growth relationships have been observed in black spruce, there is little known about the multivariate responses of individual trees to temperature and precipitation and whether or not black spruce exhibits growth divergences similar to those documented for white spruce. To evaluate the occurrence of growth divergences in black spruce, we collected cores from trees growing on a steep, north-facing toposequence having a gradient in environmental parameters. Our overall goal was to assess how the climate-growth relationships of black spruce change over space and time. Specifically, we evaluated how topography influences the climate-growth relationships of black spruce and if the growth responses to climate are homogeneous. At the site-level most trees responded negatively to temperature and positively to precipitation, while at the tree-level black spruce exhibited heterogenous growth responses to climate that varied in both space (i.e., between sites) and time (i.e., seasonally and annually). There was a dominant response-type at each site, but there was also considerable variability in the proportion of trees exhibiting each response-type combination. Even in a climatically extreme setting like Alaska's boreal forest, tree responses to climate variability are spatially and temporally complex, as well as highly nonlinear.

Compartmentalization: a conceptual framework for understanding how trees grow and defend themselves

Treesearch

Alex L. Shigo

1984-01-01

The purpose of this chapter is to describe a conceptual framework for understanding how trees grow and how they and other perennial plants defend themselves. The concept of compartmentalization has developed over many years, a synthesis of ideas from a number of investigators. It is derived from detailed studies of the gross morphology and cellular anatomy of the wood...

Hybrid poplar planting in the Lake States

Treesearch

Paul O. Rudolf

1948-01-01

Poplars are among our fastest growing trees. Many of them are also relatively easy to grow from cuttings and to hybridize by means of cut flower-bearing twigs. Their wood is in demand for pulpwood, veneer for match and crate production, boxboards, and other uses. For these reasons there has been interest in many countries in selecting and breeding poplars. The tree...

I Have a Banana Tree in My Classroom

ERIC Educational Resources Information Center

Williams, Patricia A.

2007-01-01

When the banana is growing, the broadest part of the banana is located at the bottom, while the tapered end points upward. It appears upside down, however, from the banana tree's perspective, it is growing right side up. The author observes that the students in her classroom labeled by society as "at risk," are also, in a sense, "upside down."…

Summer is the best time to thin hybrid poplar plantations

Treesearch

Harold F. Ford; Albert G., Jr. Snow

1954-01-01

Hybrid poplar plantations are established by planting dormant cuttings in close spacing, usually 4 x 4 feet. They are cultivated during the first growing season to eliminate competition from grasses and weeds. After the first year, the more vigorous trees effectively shade out lower vegetation. But rapid tree growth often makes thinning necessary after 2 or 3 growing...

Inverse modeling and animation of growing single-stemmed trees at interactive rates

Treesearch

S. Rudnick; L. Linsen; E.G. McPherson

2007-01-01

For city planning purposes, animations of growing trees of several species can be used to deduce which species may best fit a particular environment. The models used for the animation must conform to real measured data. We present an approach for inverse modeling to fit global growth parameters. The model comprises local production rules, which are iteratively and...

Growing the urban forest: tree performance in response to biotic and abiotic land management

Treesearch

Emily E. Oldfield; Alexander J. Felson; D. S. Novem Auyeung; Thomas W. Crowther; Nancy F. Sonti; Yoshiki Harada; Daniel S. Maynard; Noah W. Sokol; Mark S. Ashton; Robert J. Warren; Richard A. Hallett; Mark A. Bradford

2015-01-01

Forests are vital components of the urban landscape because they provide ecosystem services such as carbon sequestration, storm-water mitigation, and air-quality improvement. To enhance these services, cities are investing in programs to create urban forests. A major unknown, however, is whether planted trees will grow into the mature, closed-canopied forest on which...

Topological leakage detection and freeze-and-grow propagation for improved CT-based airway segmentation

NASA Astrophysics Data System (ADS)

Nadeem, Syed Ahmed; Hoffman, Eric A.; Sieren, Jered P.; Saha, Punam K.

2018-03-01

Numerous large multi-center studies are incorporating the use of computed tomography (CT)-based characterization of the lung parenchyma and bronchial tree to understand chronic obstructive pulmonary disease status and progression. To the best of our knowledge, there are no fully automated airway tree segmentation methods, free of the need for user review. A failure in even a fraction of segmentation results necessitates manual revision of all segmentation masks which is laborious considering the thousands of image data sets evaluated in large studies. In this paper, we present a novel CT-based airway tree segmentation algorithm using topological leakage detection and freeze-and-grow propagation. The method is fully automated requiring no manual inputs or post-segmentation editing. It uses simple intensity-based connectivity and a freeze-and-grow propagation algorithm to iteratively grow the airway tree starting from an initial seed inside the trachea. It begins with a conservative parameter and then, gradually shifts toward more generous parameter values. The method was applied on chest CT scans of fifteen subjects at total lung capacity. Airway segmentation results were qualitatively assessed and performed comparably to established airway segmentation method with no major visual leakages.

Distribution and mixing of old and new nonstructural carbon in two temperate trees.

PubMed

Richardson, Andrew D; Carbone, Mariah S; Huggett, Brett A; Furze, Morgan E; Czimczik, Claudia I; Walker, Jennifer C; Xu, Xiaomei; Schaberg, Paul G; Murakami, Paula

2015-04-01

We know surprisingly little about whole-tree nonstructural carbon (NSC; primarily sugars and starch) budgets. Even less well understood is the mixing between recent photosynthetic assimilates (new NSC) and previously stored reserves. And, NSC turnover times are poorly constrained. We characterized the distribution of NSC in the stemwood, branches, and roots of two temperate trees, and we used the continuous label offered by the radiocarbon (carbon-14, (14) C) bomb spike to estimate the mean age of NSC in different tissues. NSC in branches and the outermost stemwood growth rings had the (14) C signature of the current growing season. However, NSC in older aboveground and belowground tissues was enriched in (14) C, indicating that it was produced from older assimilates. Radial patterns of (14) C in stemwood NSC showed strong mixing of NSC across the youngest growth rings, with limited 'mixing in' of younger NSC to older rings. Sugars in the outermost five growth rings, accounting for two-thirds of the stemwood pool, had a mean age < 1 yr, whereas sugars in older growth rings had a mean age > 5 yr. Our results are thus consistent with a previously-hypothesized two-pool ('fast' and 'slow' cycling NSC) model structure. These pools appear to be physically distinct. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Frost monitoring of fruit tree with satellite data

NASA Astrophysics Data System (ADS)

Fan, Jinlong; Zhang, Mingwei; Cao, Guangzheng; Zhang, Xiaoyu; Liu, Chenchen; Niu, Xinzan; Xu, Wengbo

2012-09-01

The orchards are developing very fast in the northern China in recent years with the increasing demands on fruits in China. In most parts of the northern China, the risk of frost damage to fruit tree in early spring is potentially high under the background of global warming. The growing season comes earlier than it does in normal year due to the warm weather in earlier spring and the risk will be higher in this case. According to the reports, frost event in spring happens almost every year in Ningxia Region, China. In bad cases, late frosts in spring can be devastating all fruit. So lots of attention has been given to the study in monitoring, evaluating, preventing and mitigating frost. Two orchards in Ningxia, Taole and Jiaozishan orchards were selected as the study areas. MODIS data were used to monitor frost events in combination with minimum air temperature recorded at weather station. The paper presents the findings. The very good correlation was found between MODIS LST and minimum air temperature in Ningxia. Light, middle and severe frosts were captured in the study area by MODIS LST. The MODIS LST shows the spatial differences of temperature in the orchards. 10 frost events in April from 2000 to 2010 were captured by the satellite data. The monitoring information may be hours ahead circulated to the fruit farmers to prevent the damage and loss of fruit trees.

Winter Birch Trees

ERIC Educational Resources Information Center

Sweeney, Debra; Rounds, Judy

2011-01-01

Trees are great inspiration for artists. Many art teachers find themselves inspired and maybe somewhat obsessed with the natural beauty and elegance of the lofty tree, and how it changes through the seasons. One such tree that grows in several regions and always looks magnificent, regardless of the time of year, is the birch. In this article, the…

Individual Oak Tree Growth in Southern Bottomland Hardwood Stands (Preliminary Results)

Treesearch

Luben D. Dimov; Brian Roy Lockhart; Jim L. Chambers

2004-01-01

Southern bottomland hardwood forests are an important natural resource. Silvicultural practices in them are often intended to provide suitable growing conditions to selected individual trees of valuable species by employing crop-tree management. Research on crop-tree management, however, has been considerably less than the research regarding stand-level management. In...

Short-term dynamics and partitioning of newly assimilated carbon in the foliage of adult beech and pine are driven by seasonal variations

NASA Astrophysics Data System (ADS)

Desalme, Dorine; Priault, Pierrick; Gérant, Dominique; Dannoura, Masako; Maillard, Pascale; Plain, Caroline; Epron, Daniel

2017-04-01

Carbon (C) allocation is a key process determining C cycling in forest ecosystems. However, the mechanisms underlying the annual patterns of C partitioning in trees, influenced by tree phenology and environmental conditions, are not well identified yet. This study aimed to characterize the short-term dynamics and partitioning of newly assimilated carbon in the foliage of adult European beeches (Fagus sylvatica) and maritime pines (Pinus pinaster) across the seasons. We hypothesized that residence times of recently assimilated C in C compounds should change according to the seasons and that seasonal pattern should differ between deciduous and evergreen tree species, since they have different phenology. 13CO2 pulse-labelling experiments were performed in situ at different dates corresponding to different phenological stages. In beech leaves and pine needles, C contents, isotopic compositions, and 13C dynamics parameters were determined in total organic matter (bulk foliage), in polar fraction (PF, including soluble sugars, amino acids, organic acids) and in starch. For both species and at each phenological stage, 13C amount in bulk foliage decreased following a two-pool exponential model, highlighting the partitioning of newly assimilated C between 'mobile' and 'stable' pools. The relative proportion of the stable pool was maximal in beech leaves in May, when leaves were still growing and could incorporate newly assimilated C in structural C compounds. Young pine needles were still receiving C from previous-year needles in June (two months after budburst) although they are already photosynthesizing, acting as a strong C sink. In summer, short mean residence times of 13C (MRT) in foliage of both tree species reflected the fast respiration and exportation of recent photosynthates to support the whole tree C demand (e.g., supplying perennial organ growth). At the end of the growing season, pre-senescing beech leaves were supplying 13C to perennial organs, whereas overwintering pine needles accumulated labelled PF, probably to acclimate to colder winter temperatures. Results of this experiment revealed that the dynamics and the in-leaf partitioning of newly assimilated C varied seasonally according to the phenology of the two species. In the future, coupling 13C pulse labelling with compound-specific isotope analysis will be promising for tracing the allocation of newly assimilated C to various physiological functions such as growth, export, osmoregulation and defence in trees submitted to global changes.

Urban Forestry Laboratory Exercises (For Elementary, Middle, and High School)

Treesearch

USDA Forest Service

1998-01-01

The development of the Urban Forest is fast becoming a major concern. The population shift in our country from rural to urban is undeniable. People see trees as a barrier to the hot summer sun and harsh winter winds. They see trees as a source of natural aesthetic beauty. Trees are a resource for the renewal of inner peace and health. Trees are landscape essentials,...

Quantitative and qualitative characteristics of cell wall components and prenyl lipids in the leaves of Tilia x euchlora trees growing under salt stress.

PubMed

Milewska-Hendel, Anna; Baczewska, Aneta H; Sala, Katarzyna; Dmuchowski, Wojciech; Brągoszewska, Paulina; Gozdowski, Dariusz; Jozwiak, Adam; Chojnacki, Tadeusz; Swiezewska, Ewa; Kurczynska, Ewa

2017-01-01

The study was focused on assessing the presence of arabinogalactan proteins (AGPs) and pectins within the cell walls as well as prenyl lipids, sodium and chlorine content in leaves of Tilia x euchlora trees. The leaves that were analyzed were collected from trees with and without signs of damage that were all growing in the same salt stress conditions. The reason for undertaking these investigations was the observations over many years that indicated that there are trees that present a healthy appearance and trees that have visible symptoms of decay in the same habitat. Leaf samples were collected from trees growing in the median strip between roadways that have been intensively salted during the winter season for many years. The sodium content was determined using atomic spectrophotometry, chloride using potentiometric titration and poly-isoprenoids using HPLC/UV. AGPs and pectins were determined using immunohistochemistry methods. The immunohistochemical analysis showed that rhamnogalacturonans I (RG-I) and homogalacturonans were differentially distributed in leaves from healthy trees in contrast to leaves from injured trees. In the case of AGPs, the most visible difference was the presence of the JIM16 epitope. Chemical analyses of sodium and chloride showed that in the leaves from injured trees, the level of these ions was higher than in the leaves from healthy trees. Based on chromatographic analysis, four poly-isoprenoid alcohols were identified in the leaves of T. x euchlora. The levels of these lipids were higher in the leaves from healthy trees. The results suggest that the differences that were detected in the apoplast and symplasm may be part of the defensive strategy of T. x euchlora trees to salt stress, which rely on changes in the chemical composition of the cell wall with respect to the pectic and AGP epitopes and an increased synthesis of prenyl lipids.

Quantitative and qualitative characteristics of cell wall components and prenyl lipids in the leaves of Tilia x euchlora trees growing under salt stress

PubMed Central

Milewska-Hendel, Anna; Baczewska, Aneta H.; Sala, Katarzyna; Dmuchowski, Wojciech; Brągoszewska, Paulina; Gozdowski, Dariusz; Jozwiak, Adam; Chojnacki, Tadeusz; Swiezewska, Ewa; Kurczynska, Ewa

2017-01-01

The study was focused on assessing the presence of arabinogalactan proteins (AGPs) and pectins within the cell walls as well as prenyl lipids, sodium and chlorine content in leaves of Tilia x euchlora trees. The leaves that were analyzed were collected from trees with and without signs of damage that were all growing in the same salt stress conditions. The reason for undertaking these investigations was the observations over many years that indicated that there are trees that present a healthy appearance and trees that have visible symptoms of decay in the same habitat. Leaf samples were collected from trees growing in the median strip between roadways that have been intensively salted during the winter season for many years. The sodium content was determined using atomic spectrophotometry, chloride using potentiometric titration and poly-isoprenoids using HPLC/UV. AGPs and pectins were determined using immunohistochemistry methods. The immunohistochemical analysis showed that rhamnogalacturonans I (RG-I) and homogalacturonans were differentially distributed in leaves from healthy trees in contrast to leaves from injured trees. In the case of AGPs, the most visible difference was the presence of the JIM16 epitope. Chemical analyses of sodium and chloride showed that in the leaves from injured trees, the level of these ions was higher than in the leaves from healthy trees. Based on chromatographic analysis, four poly-isoprenoid alcohols were identified in the leaves of T. x euchlora. The levels of these lipids were higher in the leaves from healthy trees. The results suggest that the differences that were detected in the apoplast and symplasm may be part of the defensive strategy of T. x euchlora trees to salt stress, which rely on changes in the chemical composition of the cell wall with respect to the pectic and AGP epitopes and an increased synthesis of prenyl lipids. PMID:28234963

Improving sustainability in the remediation of contaminated soils by the use of compost and energy valorization by Paulownia fortunei.

PubMed

Madejón, Paula; Domínguez, María Teresa; Díaz, Manuel Jesús; Madejón, Engracia

2016-01-01

The plantation of fast growing trees in contaminated sites, in combination with the use of organic wastes, could partially solve a dual environmental problem: the disposal of these wastes and the improvement of soil quality in these degraded soils. This study evaluated the effects of two compost on the quantity and quality of Paulownia fortunei biomass and on syngas production by biomass gasification, produced by plants growing on trace elements contaminated soils. Compost increased biomass production to values similar to those produced in non-contaminated soils, due to the improvement in plant nutritional status. Moreover, biomass quality for gasification was increased by compost addition. Trace element accumulation in the biomass was relatively low and not related to biomass production or the gas quality obtained through gasification. Thus, P. fortunei plantations could pose an opportunity to improve the economic balance of the revegetation of contaminated soils, given that other commercial uses such as food or fodder crop production is not recommended in these soils. Copyright © 2015 Elsevier B.V. All rights reserved.

Current and Future Distribution of the Tropical Tree Cedrela odorata L. in Mexico under Climate Change Scenarios Using MaxLike

PubMed Central

Martínez Meyer, Enrique; Sánchez-Velásquez, Lázaro R.

2016-01-01

Climate change is recognized as an important threat to global biodiversity because it increases the risk of extinction of many species on the planet. Mexico is a megadiverse country and native tree species such as red cedar (Cedrela odorata) can be used to maintain forests while helping mitigate climate change, because it is considered a fast growing pioneer species with great economic potential in the forestry industry. In order to assess possible shifts in areas suitable for C. odorata plantations in Mexico with ecological niche models, we used the MaxLike algorithm, climate variables, the geo-referenced records of this species, three general circulation models and three scenarios of future emissions. Results show a current potential distribution of 573,079 km2 with an average probability of occurrence of 0.93 (± 0.13). The potential distribution area could increase up to 650,356 km2 by 2060 according to the general circulation model HADCM3 B2, with an average probability of occurrence of 0.86 (± 0.14). Finally, we delimited an area of 35,377 km2 that has a high potential for the establishment of C. odorata plantations, by selecting those sites with optimal conditions for its growth that are outside protected areas and are currently devoid of trees. C. odorata has a significant potential to help in the mitigation of the effects of climate change. Using MaxLike we identified extense areas in Mexico suitable to increase carbon sequestration through plantations of this highly valued native tree species. PMID:27732622

Current and Future Distribution of the Tropical Tree Cedrela odorata L. in Mexico under Climate Change Scenarios Using MaxLike.

PubMed

Estrada-Contreras, Israel; Equihua, Miguel; Laborde, Javier; Martínez Meyer, Enrique; Sánchez-Velásquez, Lázaro R

2016-01-01

Climate change is recognized as an important threat to global biodiversity because it increases the risk of extinction of many species on the planet. Mexico is a megadiverse country and native tree species such as red cedar (Cedrela odorata) can be used to maintain forests while helping mitigate climate change, because it is considered a fast growing pioneer species with great economic potential in the forestry industry. In order to assess possible shifts in areas suitable for C. odorata plantations in Mexico with ecological niche models, we used the MaxLike algorithm, climate variables, the geo-referenced records of this species, three general circulation models and three scenarios of future emissions. Results show a current potential distribution of 573,079 km2 with an average probability of occurrence of 0.93 (± 0.13). The potential distribution area could increase up to 650,356 km2 by 2060 according to the general circulation model HADCM3 B2, with an average probability of occurrence of 0.86 (± 0.14). Finally, we delimited an area of 35,377 km2 that has a high potential for the establishment of C. odorata plantations, by selecting those sites with optimal conditions for its growth that are outside protected areas and are currently devoid of trees. C. odorata has a significant potential to help in the mitigation of the effects of climate change. Using MaxLike we identified extense areas in Mexico suitable to increase carbon sequestration through plantations of this highly valued native tree species.

Planting Trees in Designed and Built Community Landscapes - Checklists for Success

Treesearch

Mary K. Reynolds; H. Sharon Ossenbruggen

Trees create green spaces in communities. The right trees in the right places benefit you, your home, and your community now and in the future. It is essential to select living trees to create a sense of place within communities. This publication helps citizens create community green spaces. It encourages both experts and amateurs to plant and grow trees correctly, and...

Some Kinds of Cancer Kids Get

MedlinePlus

... normal grow too fast and spread out of control. A group or mass of growing cells is called a ... person, these white blood cells multiply out of control. They fill up the bone ... Cancer A brain tumor is a group or clump of fast-growing cells that can ...

Evaluating the ecological impacts of salvage logging: can natural and anthropogenic disturbances promote coexistence?

PubMed

Royo, Alejandro A; Peterson, Chris J; Stanovick, John S; Carson, Walter P

2016-06-01

Salvage logging following windthrow is common throughout forests worldwide even though the practice is often considered inimical to forest recovery. Because salvaging removes trees, crushes seedlings, and compacts soils, many warn this practice may delay succession, suppress diversity, and alter composition. Here, over 8 yr following windthrow, we experimentally evaluate how salvaging affects tree succession across 11 gaps in Eastern deciduous forests of Pennsylvania, wherein each gap was divided into salvaged and control (unsalvaged) halves. Our gaps vary in size and windthrow severity, and we explicitly account for this variation as well as variation in soil disturbance (i.e., scarification) resulting from salvaging so that our results would be generalizable. Salvage logging had modest and ephemeral impacts on tree succession. Seedling richness and density declined similarly over time in both salvaged and unsalvaged areas as individuals grew into saplings. The primary impact of salvaging on succession occurred where salvaging scarified soils. Here, salvaging caused 41 to 82% declines in sapling abundance, richness, and diversity, but these differences largely disappeared within 5 yr. Additionally, we documented interactions between windthrow severity and scarification. Specifically, low-severity windthrow and scarification combined reinforced dominance by shade-tolerant and browse-tolerant species (Acer pensylvanicum, Fagus grandifolia). In contrast, high windthrow severity and scarification together reduced the density of a fast-growing pioneer tree (Prunus pensylvanica) and non-tree vegetation cover by 75% and 26%, respectively. This reduction enhanced the recruitment of two mid-successional tree species, Acer rubrum and Prunus serotina, by 2 and 3-fold, respectively. Thus, our findings demonstrate that salvaging creates novel microsites and mitigates competing vegetation, thereby enhancing establishment of important hardwoods and promoting tree species coexistence. Our results, coupled with an assessment of 27 published post-windthrow salvage studies, suggest short-term studies may overestimate the impact of salvaging on regeneration. We conclude that the ecological costs and benefits of salvaging depend upon the variation in canopy and soil disturbance severity as well as the timescale at which effects are evaluated. Thus, our findings are inconsistent with the view that salvaging inexorably undermines plant diversity; rather we suggest salvaging can promote tree species coexistence within various contexts.

Energy production for environmental issues in Turkey

NASA Astrophysics Data System (ADS)

Yuksel, Ibrahim; Arman, Hasan; Halil Demirel, Ibrahim

2017-11-01

Due to the diversification efforts of energy sources, use of natural gas that was newly introduced into Turkish economy, has been growing rapidly. Turkey has large reserves of coal, particularly of lignite. The proven lignite reserves are 8.0 billion tons. The estimated total possible reserves are 30 billion tons. Turkey, with its young population and growing energy demand per person, its fast growing urbanization, and its economic development, has been one of the fast growing power markets of the world for the last two decades. It is expected that the demand for electric energy in Turkey will be 580 billion kWh by the year 2020. Turkey's electric energy demand is growing about 6-8% yearly due to fast economic growing. This paper deals with energy demand and consumption for environmental issues in Turkey.

FastBit Reference Manual

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu, Kesheng

2007-08-02

An index in a database system is a data structure that utilizes redundant information about the base data to speed up common searching and retrieval operations. Most commonly used indexes are variants of B-trees, such as B+-tree and B*-tree. FastBit implements a set of alternative indexes call compressed bitmap indexes. Compared with B-tree variants, these indexes provide very efficient searching and retrieval operations by sacrificing the efficiency of updating the indexes after the modification of an individual record. In addition to the well-known strengths of bitmap indexes, FastBit has a special strength stemming from the bitmap compression scheme used. Themore » compression method is called the Word-Aligned Hybrid (WAH) code. It reduces the bitmap indexes to reasonable sizes and at the same time allows very efficient bitwise logical operations directly on the compressed bitmaps. Compared with the well-known compression methods such as LZ77 and Byte-aligned Bitmap code (BBC), WAH sacrifices some space efficiency for a significant improvement in operational efficiency. Since the bitwise logical operations are the most important operations needed to answer queries, using WAH compression has been shown to answer queries significantly faster than using other compression schemes. Theoretical analyses showed that WAH compressed bitmap indexes are optimal for one-dimensional range queries. Only the most efficient indexing schemes such as B+-tree and B*-tree have this optimality property. However, bitmap indexes are superior because they can efficiently answer multi-dimensional range queries by combining the answers to one-dimensional queries.« less

Management and dermoscopy of fast-growing nevi in pregnancy: case report and literature review.

PubMed

Zampetti, Anna; Feliciani, Claudio; Landi, Francesco; Capaldo, M L; Rotoli, M; Amerio, P L

2006-01-01

The relationship between pregnancy and a change in melanocytic nevi is still controversial. Moreover, management of the rapid evolution of a nevus in an unauspicious melanocytic lesion can be a clinical challenge in pregnancy. This article examines a case of a fast-growing deep penetrating nevus in a pregnant woman and provides a literature review of articles relative to pregnancy and nevi change, the management of fast-growing pigmented lesions, and the role and usefulness of dermoscopy in these cases. Recent studies have documented that pregnancy is not associated with any significant change in the size of melanocytic nevi. The management of fast-growing melanocytic lesions during this period compulsorily leans toward excision. Dermoscopy can be useful, providing clinicohistopathologic correlations and a better assignment of the lesion. This case report and review provide important management considerations for nevi during pregnancy. Early intervention with aggressive treatment measures is the best management for fast-growing lesions, and epiluminescence dermoscopy can assist the management, although still remaining a second-level examination, useful for documentation and for a better classification of the lesion.

Trees, Shrubs, and Woody Vines of the Bluff Experimental Forest, Warren County, Mississippi

Treesearch

Robert L. Johnson; Elbert L. Little

1967-01-01

Nearly 100 species of trees, shrubs, and woody vines grow naturally on the 450-acre Bluff Experimental Forest in west-central Mississippi. This publication lists the plants and provides information on silvical characteristics of the tree species.

Use ammate in notches for deadening trees only during the growing season

Treesearch

W. E. McQuilkin

1955-01-01

One of the commonly recommended methods for deadening weed and cull trees for timber-stand improvement is by use of ammate crystals in ax notches or cups spaced about 6 inches apart around the base of the tree.

Effects of open-top chambers on 'Valencia' orange trees

DOE Office of Scientific and Technical Information (OSTI.GOV)

Olszyk, D.M.; Takemoto, B.K.; Kats, G.

1992-01-01

Young 'Valencia' orange trees (Citrus sinensis(L) Osbeck) were grown for four years in large open-top chambers with ambient (nonfiltered) air or in outside air to determine any effects of the chambers on the air pollutant susceptibility of the trees. Long-term ozone average concentrations (12 hours, growing season) were 8% lower, and cumulative ozone dose (hourly values >0.1 microL/L) was 29% lower in ambient chambers compared to outside air. Fruit yields were much higher (>39%) for ambient chamber trees than for outside trees over three harvests, due at least partly to less fruit drop during the growing season for ambient chambermore » trees. Ambient chamber trees were much larger than outside trees and produced over twice as much leaf material over four years of study. Leaves on ambient chamber trees were larger and less dense than on outside trees. Leaves on ambient chamber trees were under more stress than leaves on outside trees during summer months; with lower stomatal conductances (14% average) and transpiration rates (12%), and more negative leaf water pressure potentials (28%). In contrast, leaves on ambient chamber trees had higher net photosynthetic rates (13%) and higher leaf starch concentrations prior to tree flowering (31%), than leaves on outside trees. While these results indicated large long-term impacts on tree growth which must be considered when using open-top chambers, they did not indicate any net effect of chambers on the air pollutant susceptibility of trees which would limit the usefulness of chamber tree data for air quality impact assessment purposes.« less

Two Improved Access Methods on Compact Binary (CB) Trees.

ERIC Educational Resources Information Center

Shishibori, Masami; Koyama, Masafumi; Okada, Makoto; Aoe, Jun-ichi

2000-01-01

Discusses information retrieval and the use of binary trees as a fast access method for search strategies such as hashing. Proposes new methods based on compact binary trees that provide faster access and more compact storage, explains the theoretical basis, and confirms the validity of the methods through empirical observations. (LRW)

Remediation of cyanide-contaminated industrial sites through woody biomass production

NASA Astrophysics Data System (ADS)

Dimitrova, Tsvetelina; Repmann, Frank; Freese, Dirk

2017-04-01

Due to the unfavourable chemical and physical soil quality parameters and the potential presence of contaminants, former industrial sites can hardly be utilized as arable land and can thus be classified as marginal areas. Still, as far as possible, they can effectively be used for the production of alternative energy, including the cultivation of fast growing trees. Apart from being a source of bioenergy, trees might facilitate the stabilization, remedation, contaminant extraction and degradation and, not on the last place, to enhance soil quality improvement on former industrial areas. This process is known as phytoremediation and has successfully been applied on industrial sites of various organic and inorganic contamination. The former manufactured gas plant site ( 2500 m2) "ehemalige Leuchtgasanstalt" Cottbus, contaminated, among others, with iron cyanides undergoes phytoremediation with simultaneous biomass production since 2011. The project "Biomass-Remediation" is fully financed by the German Railways JSC. A dense (23700 stems/ha), mixed cover of willow (Salix caprea), poplar (Populus maximowicii Henry x Populus trichocarpa Torr. et Gray (Hybrid 275)) and black locust (Robinia pseudoaccacia) trees has been planted on the site. Throughout the five years of remediation, a successful long-term stabilization of the site has been achieved as a result of the nearly outright established tree stock and the dense planting. Annual monitoring of the cyanide levels in the leaf tissue of the trees on the site and results from greenhouse experiments indicate the ability of all tree species to extract and transport the cyanide from the soil. Additonally, the greenhouse experiments suggest that the willows might be able, although not to a full extent, to detoxify the contaminant by splitting the CN moiety. The contaminated biomass material might easily be dealt with through regular harvests and subsequent incineration. Phytoremediation with simultaneous biomass production for bioenergy offers an environmenatlly-friendly and a cost-effective solution of the problem with contaminated former industrial areas in the context of marginal land use options.

36 CFR 230.31 - Definitions.

Code of Federal Regulations, 2013 CFR

2013-07-01

.... Nonindustrial private forest land. Rural lands with existing tree cover, or which are suitable for growing trees...-term sustainability of nonindustrial private forest lands within the State. ...

36 CFR 230.31 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-07-01

.... Nonindustrial private forest land. Rural lands with existing tree cover, or which are suitable for growing trees...-term sustainability of nonindustrial private forest lands within the State. ...

36 CFR 230.31 - Definitions.

Code of Federal Regulations, 2012 CFR

2012-07-01

.... Nonindustrial private forest land. Rural lands with existing tree cover, or which are suitable for growing trees...-term sustainability of nonindustrial private forest lands within the State. ...

36 CFR 230.31 - Definitions.

Code of Federal Regulations, 2014 CFR

2014-07-01

.... Nonindustrial private forest land. Rural lands with existing tree cover, or which are suitable for growing trees...-term sustainability of nonindustrial private forest lands within the State. ...

The “anomalous cedar trees” of Lake Ashi, Hakone Volcano, Japan

USGS Publications Warehouse

Oki, Y.

1984-01-01

On the bottom of Lake Ashi at Hakone, Japan, there stand great trees that, since ancient times, have been widely known as the "Anomalous Cedar Trees" of Ashi. It is not known why these trees grow on the bottom of the lake, and it remains one of the mysteries of Hakone. It was formerly thought that, at the time Lake Ashi was born, a great forest of cedar trees which was growing in the caldera of the volcano sank into the water. From radioactive carbon dating techniques, it is known that a steam explosion in the Kami Mountains created the caldera approximately 3,000 years ago. The age of the "Anomalous Cedars" is placed at approximately. 

Diameter-growth model across shortleaf pine range using regression tree analysis

Treesearch

Daniel Yaussy; Louis Iverson; Anantha Prasad

1999-01-01

Diameter growth of a tree in most gap-phase models is limited by light, nutrients, moisture, and temperature. Growing-season temperature is represented by growing degree days (gdd), which is the sum of the average daily temperatures above a baseline temperature. Gap-phase models determine the north-south range of a species by the gdd limits at the north and south...

Why hardwoods do not grow naturally in the west

Treesearch

J. A. Larsen

1924-01-01

Unfortunately the beautiful hardwood trees which are native to the Eastern States do not grow naturally in the West. We have here only aspen, cottonwood, small birch, hawthorns, cherry, and alder. On the Pacific coast are oak and maple, but limited largely to lower moist sites such as streams bed and canyons. The general absence of broad leaf trees in the West is most...

2, 4, 5 -T amine not recommended for frill-treating hardwood culls in West Virginia

Treesearch

Harry W. Yawney

1962-01-01

Cull trees and undesirable species may occupy a high percentage of forest growing space. In a managed forest, these unwanted individuals must be cut or killed so that sound vigorous growing stock of good species can utilize the space. The methods most frequently used to eliminate medium to large-size trees from timber stands are either girdling or application of...

A Pine Is a Pine and a Spruce Is a Spruce--The Effect of Tree Species and Stand Age on Epiphytic Lichen Communities.

PubMed

Bäcklund, Sofia; Jönsson, Mari; Strengbom, Joachim; Frisch, Andreas; Thor, Göran

2016-01-01

With an increasing demand for forest-based products, there is a growing interest in introducing fast-growing non-native tree species in forest management. Such introductions often have unknown consequences for native forest biodiversity. In this study, we examine epiphytic lichen species richness and species composition on the trunks of non-native Pinus contorta and compare these to the native Pinus sylvestris and Picea abies in managed boreal forests in northern Sweden across a chronosequence of age classes. Overall, we recorded a total of 66,209 lichen occurrences belonging to 57 species in the 96 studied forest stands. We found no difference in species richness of lichens between stands of P. contorta and P. sylvestris, but stands of P. abies had higher total species richness. However, species richness of lichens in stands of P. abies decreased with increasing stand age, while no such age effect was detected for P. contorta and P. sylvestris. Lichen species composition progressively diverged with increasing stand age, and in 30-year-old stands all three tree species showed species-specific assemblages. Epiphytic lichen assemblages in stands of 30-year-old P. contorta were influenced by greater basal area, canopy closure, and average diameter at breast height, P. abies stands by higher branch density and canopy closure, and stands of P. sylvestris by greater bark crevice depth. Differences in lichen species richness and composition were mainly explained by canopy closure and habitat availability, and the greater canopy closure in mature P. abies stands promoted the colonization and growth of calicioid lichen species. Our results indicate that the non-native P. contorta have similar species richness as the native P. sylvestris. The main difference in lichen species richness and composition is between P. abies and Pinus spp. in managed forests of boreal Sweden.

A Pine Is a Pine and a Spruce Is a Spruce – The Effect of Tree Species and Stand Age on Epiphytic Lichen Communities

PubMed Central

Bäcklund, Sofia; Jönsson, Mari; Strengbom, Joachim; Frisch, Andreas; Thor, Göran

2016-01-01

With an increasing demand for forest-based products, there is a growing interest in introducing fast-growing non-native tree species in forest management. Such introductions often have unknown consequences for native forest biodiversity. In this study, we examine epiphytic lichen species richness and species composition on the trunks of non-native Pinus contorta and compare these to the native Pinus sylvestris and Picea abies in managed boreal forests in northern Sweden across a chronosequence of age classes. Overall, we recorded a total of 66,209 lichen occurrences belonging to 57 species in the 96 studied forest stands. We found no difference in species richness of lichens between stands of P. contorta and P. sylvestris, but stands of P. abies had higher total species richness. However, species richness of lichens in stands of P. abies decreased with increasing stand age, while no such age effect was detected for P. contorta and P. sylvestris. Lichen species composition progressively diverged with increasing stand age, and in 30-year-old stands all three tree species showed species-specific assemblages. Epiphytic lichen assemblages in stands of 30-year-old P. contorta were influenced by greater basal area, canopy closure, and average diameter at breast height, P. abies stands by higher branch density and canopy closure, and stands of P. sylvestris by greater bark crevice depth. Differences in lichen species richness and composition were mainly explained by canopy closure and habitat availability, and the greater canopy closure in mature P. abies stands promoted the colonization and growth of calicioid lichen species. Our results indicate that the non-native P. contorta have similar species richness as the native P. sylvestris. The main difference in lichen species richness and composition is between P. abies and Pinus spp. in managed forests of boreal Sweden. PMID:26799558

Drivers of Tree Growth, Mortality and Harvest Preferences in Species-Rich Plantations for Smallholders and Communities in the Tropics

PubMed Central

Nguyen, Huong; Vanclay, Jerome; Herbohn, John; Firn, Jennifer

2016-01-01

There is growing interest in multi-species tropical plantations but little information exists to guide their design and silviculture. The Rainforestation Farming system is the oldest tropical polyculture planting system in the Philippines and provides a unique opportunity to understand the underlying processes affecting tree performance within diverse plantings. Data collected from 85 plots distributed across the 18 mixed-species plantations in the Philippines was used to identify the factors influencing growth, probability of harvest, and death of trees in these complex plantings. The 18 sites (aged from 6 to 11 years at time of first measurement) were measured on three occasions over a 6-year period. We used data from the first period of data collection to develop models predicting harvesting probability and growth of trees in the second period. We found little evidence that tree species diversity had an effect on tree growth and tree loss at the community level, although a negative effect was found on tree growth of specific species such as Parashorea plicata and Swietenia macrophylla. While tree density of stands at age 10+ years (more than 1000 trees/ha with diameter > 5cm) did not have an impact on growth, growth rates were decreasing in stands with a high basal area. Tree size in the first period of measure was a good predictor for both tree growth and tree status in the next period, with larger trees tending to grow faster and having a greater chance of being harvested, and a lower possibility of mortality than smaller trees. Shade-intolerant trees were both more likely to be harvested, and had a higher probability of death, than shade-tolerant individuals. Native species and exotic species were equally likely to have been lost from the plots between measurement periods. However, shade-tolerant native trees were likely to grow faster than the others at age 10+ years. Our findings suggest that species traits (e.g. shade tolerance) could play an important role in optimizing species composition for this type of plantation. Shade-intolerant species with rapid early growth could contribute early income for farmers in mixed plantings where some products may take years to realize. We also suggest selective harvesting or thinning (for small shade-intolerant trees) applied at age 10+ years could reduce the competition for resources between individuals. PMID:27764186

Drivers of Tree Growth, Mortality and Harvest Preferences in Species-Rich Plantations for Smallholders and Communities in the Tropics.

PubMed

Nguyen, Huong; Vanclay, Jerome; Herbohn, John; Firn, Jennifer

2016-01-01

There is growing interest in multi-species tropical plantations but little information exists to guide their design and silviculture. The Rainforestation Farming system is the oldest tropical polyculture planting system in the Philippines and provides a unique opportunity to understand the underlying processes affecting tree performance within diverse plantings. Data collected from 85 plots distributed across the 18 mixed-species plantations in the Philippines was used to identify the factors influencing growth, probability of harvest, and death of trees in these complex plantings. The 18 sites (aged from 6 to 11 years at time of first measurement) were measured on three occasions over a 6-year period. We used data from the first period of data collection to develop models predicting harvesting probability and growth of trees in the second period. We found little evidence that tree species diversity had an effect on tree growth and tree loss at the community level, although a negative effect was found on tree growth of specific species such as Parashorea plicata and Swietenia macrophylla. While tree density of stands at age 10+ years (more than 1000 trees/ha with diameter > 5cm) did not have an impact on growth, growth rates were decreasing in stands with a high basal area. Tree size in the first period of measure was a good predictor for both tree growth and tree status in the next period, with larger trees tending to grow faster and having a greater chance of being harvested, and a lower possibility of mortality than smaller trees. Shade-intolerant trees were both more likely to be harvested, and had a higher probability of death, than shade-tolerant individuals. Native species and exotic species were equally likely to have been lost from the plots between measurement periods. However, shade-tolerant native trees were likely to grow faster than the others at age 10+ years. Our findings suggest that species traits (e.g. shade tolerance) could play an important role in optimizing species composition for this type of plantation. Shade-intolerant species with rapid early growth could contribute early income for farmers in mixed plantings where some products may take years to realize. We also suggest selective harvesting or thinning (for small shade-intolerant trees) applied at age 10+ years could reduce the competition for resources between individuals.

Long-term Artificial Annual Flooding Reduces Nuttall Oak Bole Growth

Treesearch

Bryce E. Schlaegel

1984-01-01

Nuttall oak (Quercus nuttallii Palmer) bole volume growth is significantly reduced by longterm artificial annual flooding of thinned stands, Regardless of size, trees growing in a green-tree reservoir grew significantly less in cubic-foot volume than trees in a nearby nonflooded area during the 6-year study period. Trees subject to heavy thinning...

Effect of crown growing space on the development of young hardwood crop trees

Treesearch

Gary W. Miller

2000-01-01

Crown release of individual crop trees can be used to increase the growth and competitiveness of selected trees in young hardwood stands. Forest managers need information on the response of individual trees to such thinnings to prescribe stand treatments that meet specific management objectives. Codominant northern red oak (Quercus rubra L.),...

Accuracy of tree grade projections for five Appalachian hardwood species

Treesearch

Gary W. Miller; Aaron T. Graves; Kurt W. Gottschalk; John E. Baumgras

2008-01-01

The potential value increase of individual trees is an important factor in planning effective forest management strategies. Similar to other investments, trees with high potential value increase are retained and allowed to grow, and those with relatively low potential value increase are harvested so that the proceeds may earn a higher rate of return elsewhere. Tree...

Tree crown structure indicators in a natural uneven-aged mixed coniferous forest in northeastern Mexico

Treesearch

Javier Jimenez-Perez; Oscar Aguirre-Calderon; Horst Kramer

2006-01-01

Characterization of tree crown structure provides critical information to assess a variety of ecological conditions for multiple purposes and applications. For biomass growth, for example, tree crowns have basic physiological functions: assimilation, respiration, and transpiration. How tree crowns spatially interact and grow can bring about a seamless landscape of...

Alabama, 2012 - forest inventory and analysis factsheet

Treesearch

Andrew J. Hartsell

2013-01-01

These early surveys were not concerned with the forests, species, and tree sizes that were not considered commercially viable. Early surveys reported only on growing-stock trees on timberlands, i.e. commercially important tree species and tree sizes on forests that could sustain harvest operations. Currently, FIA reports on all of the forest lands regardless of site...

Releasing 75- to 80-year-old Appalachian hardwood sawtimber trees--5-year d.b.h. response

Treesearch

H.C. Smith; G.W. Miller

1991-01-01

Generally, mature trees on good growing sites are seldom thinned or released. Instead, at maturity the trees are harvested. Data were summarized from north-central West Virginia study areas (northern red oak site index 70 feet and above) where mature trees were released on all sides of the crown (full release).

Thinning even-aged, upland oak stands

Treesearch

Donald E. Hilt; Martin E. Dale

1989-01-01

Thinning produces bigger and better trees faster. Thinning removes poor quality trees and concentrates growth on the best. Total wood production increases because trees that would otherwise die from competition are harvested. Rotation ages for sawtimber can be shortened as much as 20 years. Or, we can grow bigger, more valuable trees using the same rotation age as an...

Unthinned slow-growing ponderosa pine (Pinus ponderosa) trees contain muted isotopic signals in tree rings as compared to thinned trees

EPA Science Inventory

We analysed the oxygen isotopic values of wood (δ18Ow) of 12 ponderosa pine (Pinus ponderosa) trees from control, moderately, and heavily thinned stands and compared them with existing wood-based estimates of carbon isotope discrimination (∆13C), basal area increment (BAI), and g...

Assessment of forest plantations from low altitude aerial photography. [North Carolina coastal plains

NASA Technical Reports Server (NTRS)

Nelson, H. A.

1977-01-01

Vertical color, and color-infrared, aerial photography obtained from altitudes between 183 m and 915 m provide a cost effective method of determining tree survival and height growth in pine plantations on the North Carolina Coastal Plain. All interpretations were performed by professional forestry personnel from the original 70 mm color transparencies. Prompt assessment of tree survival is necessary if failed spots are to be successfully replanted. Counts of living trees made after the third growing season, and sometimes only two growing seasons after planting, are accurate enough to permit planning of replanting operations without extensive ground surveys.

Fast correspondences search in anatomical trees

NASA Astrophysics Data System (ADS)

dos Santos, Thiago R.; Gergel, Ingmar; Meinzer, Hans-Peter; Maier-Hein, Lena

2010-03-01

Registration of multiple medical images commonly comprises the steps feature extraction, correspondences search and transformation computation. In this paper, we present a new method for a fast and pose independent search of correspondences using as features anatomical trees such as the bronchial system in the lungs or the vessel system in the liver. Our approach scores the similarities between the trees' nodes (bifurcations) taking into account both, topological properties extracted from their graph representations and anatomical properties extracted from the trees themselves. The node assignment maximizes the global similarity (sum of the scores of each pair of assigned nodes), assuring that the matches are distributed throughout the trees. Furthermore, the proposed method is able to deal with distortions in the data, such as noise, motion, artifacts, and problems associated with the extraction method, such as missing or false branches. According to an evaluation on swine lung data sets, the method requires less than one second on average to compute the matching and yields a high rate of correct matches compared to state of the art work.

Photosynthesis, photoinhibition, and nitrogen use efficiency in native and invasive tree ferns in Hawaii.

PubMed

Durand, Leilani Z; Goldstein, Guillermo

2001-02-01

Photosynthetic gas exchange, chlorophyll fluorescence, nitrogen use efficiency, and related leaf traits of native Hawaiian tree ferns in the genus Cibotium were compared with those of the invasive Australian tree fern Sphaeropteris cooperi in an attempt to explain the higher growth rates of S. cooperi in Hawaii. Comparisons were made between mature sporophytes growing in the sun (gap or forest edge) and in shady understories at four sites at three different elevations. The invasive tree fern had 12-13 cm greater height increase per year and approximately 5 times larger total leaf surface area per plant compared to the native tree ferns. The maximum rates of photosynthesis of S. cooperi in the sun and shade were significantly higher than those of the native Cibotium spp (for example, 11.2 and 7.1 µmol m -2  s -1 , and 5.8 and 3.6 µmol m -2  s -1 respectively for the invasive and natives at low elevation). The instantaneous photosynthetic nitrogen use efficiency of the invasive tree fern was significantly higher than that of the native tree ferns, but when integrated over the life span of the frond the differences were not significant. The fronds of the invasive tree fern species had a significantly shorter life span than the native tree ferns (approximately 6 months and 12 months, respectively), and significantly higher nitrogen content per unit leaf mass. The native tree ferns growing in both sun and shade exhibited greater photoinhibition than the invasive tree fern after being experimentally subjected to high light levels. The native tree ferns recovered only 78% of their dark-acclimated quantum yield (F v /F m ), while the invasive tree fern recovered 90% and 86% of its dark-acclimated F v /F m when growing in sun and shade, respectively. Overall, the invasive tree fern appears to be more efficient at capturing and utilizing light than the native Cibotium species, particularly in high-light environments such as those associated with high levels of disturbance.

Decision-Tree Program

NASA Technical Reports Server (NTRS)

Buntine, Wray

1994-01-01

IND computer program introduces Bayesian and Markov/maximum-likelihood (MML) methods and more-sophisticated methods of searching in growing trees. Produces more-accurate class-probability estimates important in applications like diagnosis. Provides range of features and styles with convenience for casual user, fine-tuning for advanced user or for those interested in research. Consists of four basic kinds of routines: data-manipulation, tree-generation, tree-testing, and tree-display. Written in C language.

Height-related growth declines in ponderosa pine are not due to carbon limitation.

PubMed

Sala, Anna; Hoch, Günter

2009-01-01

Decreased gas exchange as trees grow tall has been proposed to explain age-related growth declines in trees. We examined changes of mobile carbon stores (starch, sugars and lipids) with tree height in ponderosa pine (Pinus ponderosa) at two sites differing in water availability, and tested the following hypotheses: (1) carbon supply does not become increasingly limited as trees grow tall; rather, the concentration of mobile carbon compounds increases with tree height reflecting greater reductions of carbon sink activities relative to carbon assimilation; and (2) increases of stored mobile carbon compounds with tree height are greater in drier sites. Height-related growth reductions were associated with significant increases of non-structural carbohydrates (NSC) and lipid concentrations in all tissues in the upper canopy and of NSC in the bole. Lipid concentrations in the bole decreased with tree height, but such decrease is not necessarily inconsistent with non-limiting carbon supply in tall trees. Furthermore, we found stronger increases of mobile carbon stores with tree height at the dry site relative to the moist site. Our results provide first direct evidence that carbon supply does not limit growth in tall trees and that decreases of water availability might negatively impact growth processes more than net-photosynthesis.

Dynamics of soil exploration by fine roots down to a depth of 10 m throughout the entire rotation in Eucalyptus grandis plantations

PubMed Central

Laclau, Jean-Paul; da Silva, Eder A.; Rodrigues Lambais, George; Bernoux, Martial; le Maire, Guerric; Stape, José L.; Bouillet, Jean-Pierre; Gonçalves, José L. de Moraes; Jourdan, Christophe; Nouvellon, Yann

2013-01-01

Although highly weathered soils cover considerable areas in tropical regions, little is known about exploration by roots in deep soil layers. Intensively managed Eucalyptus plantations are simple forest ecosystems that can provide an insight into the belowground growth strategy of fast-growing tropical trees. Fast exploration of deep soil layers by eucalypt fine roots may contribute to achieving a gross primary production that is among the highest in the world for forests. Soil exploration by fine roots down to a depth of 10 m was studied throughout the complete cycle in Eucalyptus grandis plantations managed in short rotation. Intersects of fine roots, less than 1 mm in diameter, and medium-sized roots, 1–3 mm in diameter, were counted on trench walls in a chronosequence of 1-, 2-, 3.5-, and 6-year-old plantations on a sandy soil, as well as in an adjacent 6-year-old stand growing in a clayey soil. Two soil profiles were studied down to a depth of 10 m in each stand (down to 6 m at ages 1 and 2 years) and 4 soil profiles down to 1.5–3.0 m deep. The root intersects were counted on 224 m2 of trench walls in 15 pits. Monitoring the soil water content showed that, after clear-cutting, almost all the available water stored down to a depth of 7 m was taken up by tree roots within 1.1 year of planting. The soil space was explored intensively by fine roots down to a depth of 3 m from 1 year after planting, with an increase in anisotropy in the upper layers throughout the rotation. About 60% of fine root intersects were found at a depth of more than 1 m, irrespective of stand age. The root distribution was isotropic in deep soil layers and kriged maps showed fine root clumping. A considerable volume of soil was explored by fine roots in eucalypt plantations on deep tropical soils, which might prevent water and nutrient losses by deep drainage after canopy closure and contribute to maximizing resource uses. PMID:23847645

Insects Extend the Consequences of a Warm, Dry Summer for Tree Growth in the Subsequent Summer near the Arctic Treeline in Alaska

NASA Astrophysics Data System (ADS)

Sullivan, P.; Sveinbjornsson, B.

2008-12-01

Treeline positions have important implications for surface energy budgets and carbon cycling in high latitude environments. Warming temperatures during the 20th century have been associated with both positive and negative growth trends in treeline white spruce. It has been suggested that negative growth trends may reflect the increasing importance of drought stress as a constraint on tree growth, although direct observations of water stress near the treeline are lacking. We set out to develop a more mechanistic understanding of environmental controls on gas exchange physiology and growth of white spruce near the Arctic treeline in Alaska. Our three-year study was carried out on a riverside terrace along the Agashashok River in Noatak National Preserve. The terrace is capped with a layer of sand/silt that grades from 10 cm depth at the upstream end to 45 cm depth at the downstream end. White spruce of similar size occur along the gradient at similar density, providing an opportunity to examine the role of parent material depth as a control on tree physiology and growth. Air temperatures during the 2006 growing season were near normal, there was no evidence of water stress and white spruce branch extension growth was near the long-term average. The 2007 growing season was exceptionally warm and dry. Stomatal closure was observed during mid-July throughout most of the diurnal cycle in trees growing on less than 30 cm of parent material. The warm, dry conditions and water-stress in the trees may have precipitated a major insect outbreak, which affected nearly all mature trees in the landscape. Branch extension growth in 2007 was reduced to 70 percent of that observed during the 2005 and 2006 growing seasons. Air temperatures during the 2008 growing season returned to near normal. There was no evidence of water stress, but the insect outbreak persisted and branch extension growth did not recover, remaining similar to that observed in 2007. Results of our study highlight the importance of extreme events in shaping the complexity of tree-insect-environment relations at the Arctic treeline and offer an important caution to studies that correlate tree growth with climate. Unfavorable climate conditions in one year may have consequences that persist beyond the return to favorable conditions.

Peripheral T-Cell Lymphoma

MedlinePlus

... PTCL) is defined as a diverse group of aggressive lymphomas Lymphomas that are fast growing and generally ... most common in Asia. Most PTCL subtypes are aggressive (fast-growing) lymphomas, including PTCL-NOS, AITL, ALCL, ...

Space/age forestry: Implications of planting density and rotation age in SRIC management decisions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merriam, R.A.; Phillips, V.D.; Liu, W.

1993-12-31

Short-rotation intensive-culture (SRIC) of promising tree crops is being evaluated worldwide for the production of methanol, ethanol, and electricity from renewable biomass resources. Planting density and rotation age are fundamental management decisions associated with SRIC energy plantations. Most studies of these variables have been conducted without the benefit of a unifying theory of the effects of growing space and rotation age on individual tree growth and stand level productivity. A modeling procedure based on field trials of Eucalyptus spp. is presented that evaluates the growth potential of a tree in the absence and presence of competition of neighboring trees inmore » a stand. The results of this analysis are useful in clarifying economic implications of different growing space and rotation age decisions that tree plantation managers must make. The procedure is readily applicable to other species under consideration for SRIC plantations at any location.« less

Interaction between sapwood and foliage area in alpine ash (Eucalyptus delegatensis) trees of different heights.

PubMed

Mokany, Karel; McMurtrie, Ross E; Atwell, Brian J; Keith, Heather

2003-10-01

In native stands of Eucalyptus delegatensis R. T. Baker, sapwood area (As) to foliage area (Af) ratios (As:Af) decreased as tree height increased, contradicting the common interpretation of the Pipe Model Theory as well as the generally observed trend of increasing As:Af ratios with tree height. To clarify this relationship, we estimated sapwood hydraulic conductivity theoretically based on measurements of sapwood vessel diameters and Poiseuille's law for fluid flow through pipes. Despite the observed decrease in As:Af ratios with tree height, leaf specific conductivity increased with total tree height, largely as a result of an increase in the specific conductivity of sapwood. This observation supports the proposition that the stem's ability to supply foliage with water must increase as trees grow taller, to compensate for the increased hydraulic path length. The results presented here highlight the importance of measuring sapwood hydraulic conductivity in analyses of sapwood-foliage interactions, and suggest that measurements of sapwood hydraulic conductivity may help to resolve conflicting observations of how As:Af ratios change as trees grow taller.

Overexpression of a pine Dof transcription factor in hybrid poplars: A comparative study in trees growing under controlled and natural conditions.

PubMed

Rueda-López, Marina; Pascual, María Belén; Pallero, Mercedes; Henao, Luisa María; Lasa, Berta; Jauregui, Ivan; Aparicio-Tejo, Pedro M; Cánovas, Francisco M; Ávila, Concepción

2017-01-01

In this work, the role of the pine transcriptional regulator Dof 5 in carbon and nitrogen metabolism has been examined in poplar trees. The overexpression of the gene and potential effects on growth and biomass production were compared between trees growing in a growth chamber under controlled conditions and trees growing in a field trial during two growth seasons. Ten-week-old transgenic poplars exhibited higher growth than untransformed controls and exhibited enhanced capacity for inorganic nitrogen uptake in the form of nitrate. Furthermore, the transgenic trees accumulated significantly more carbohydrates such as glucose, fructose, sucrose and starch. Lignin content increased in the basal part of the stem likely due to the thicker stem of the transformed plants. The enhanced levels of lignin were correlated with higher expression of the PAL1 and GS1.3 genes, which encode key enzymes involved in the phenylalanine deamination required for lignin biosynthesis. However, the results in the field trial experiment diverged from those observed in the chamber system. The lines overexpressing PpDof5 showed attenuated growth during the two growing seasons and no modification of carbon or nitrogen metabolism. These results were not associated with a decrease in the expression of the transgene, but they can be ascribed to the nitrogen available in the field soil compared to that available for growth under controlled conditions. This work highlights the paramount importance of testing transgenic lines in field trials.

Overexpression of a pine Dof transcription factor in hybrid poplars: A comparative study in trees growing under controlled and natural conditions

PubMed Central

Rueda-López, Marina; Pascual, María Belén; Pallero, Mercedes; Henao, Luisa María; Lasa, Berta; Jauregui, Ivan; Aparicio-Tejo, Pedro M.; Cánovas, Francisco M.

2017-01-01

In this work, the role of the pine transcriptional regulator Dof 5 in carbon and nitrogen metabolism has been examined in poplar trees. The overexpression of the gene and potential effects on growth and biomass production were compared between trees growing in a growth chamber under controlled conditions and trees growing in a field trial during two growth seasons. Ten-week-old transgenic poplars exhibited higher growth than untransformed controls and exhibited enhanced capacity for inorganic nitrogen uptake in the form of nitrate. Furthermore, the transgenic trees accumulated significantly more carbohydrates such as glucose, fructose, sucrose and starch. Lignin content increased in the basal part of the stem likely due to the thicker stem of the transformed plants. The enhanced levels of lignin were correlated with higher expression of the PAL1 and GS1.3 genes, which encode key enzymes involved in the phenylalanine deamination required for lignin biosynthesis. However, the results in the field trial experiment diverged from those observed in the chamber system. The lines overexpressing PpDof5 showed attenuated growth during the two growing seasons and no modification of carbon or nitrogen metabolism. These results were not associated with a decrease in the expression of the transgene, but they can be ascribed to the nitrogen available in the field soil compared to that available for growth under controlled conditions. This work highlights the paramount importance of testing transgenic lines in field trials. PMID:28376100

Fast–slow continuum and reproductive strategies structure plant life-history variation worldwide

PubMed Central

Salguero-Gómez, Roberto; Jones, Owen R.; Jongejans, Eelke; Blomberg, Simon P.; Hodgson, David J.; Mbeau-Ache, Cyril; Zuidema, Pieter A.; de Kroon, Hans; Buckley, Yvonne M.

2016-01-01

The identification of patterns in life-history strategies across the tree of life is essential to our prediction of population persistence, extinction, and diversification. Plants exhibit a wide range of patterns of longevity, growth, and reproduction, but the general determinants of this enormous variation in life history are poorly understood. We use demographic data from 418 plant species in the wild, from annual herbs to supercentennial trees, to examine how growth form, habitat, and phylogenetic relationships structure plant life histories and to develop a framework to predict population performance. We show that 55% of the variation in plant life-history strategies is adequately characterized using two independent axes: the fast–slow continuum, including fast-growing, short-lived plant species at one end and slow-growing, long-lived species at the other, and a reproductive strategy axis, with highly reproductive, iteroparous species at one extreme and poorly reproductive, semelparous plants with frequent shrinkage at the other. Our findings remain consistent across major habitats and are minimally affected by plant growth form and phylogenetic ancestry, suggesting that the relative independence of the fast–slow and reproduction strategy axes is general in the plant kingdom. Our findings have similarities with how life-history strategies are structured in mammals, birds, and reptiles. The position of plant species populations in the 2D space produced by both axes predicts their rate of recovery from disturbances and population growth rate. This life-history framework may complement trait-based frameworks on leaf and wood economics; together these frameworks may allow prediction of responses of plants to anthropogenic disturbances and changing environments. PMID:26699477

Where will the wood come from? Plantation forests and the role of biotechnology.

PubMed

Fenning, Trevor M; Gershenzon, Jonathan

2002-07-01

Wood is almost as important to humanity as food, and the natural forests from which most of it is harvested from are of enormous environmental value. However, these slow-growing forests are unable to meet current demand, resulting in the loss and degradation of forest. Plantation forests have the potential to supply the bulk of humanity's wood needs on a long-term basis, and so reduce to acceptable limits the harvest pressures on natural forests. However, if they are to be successful, plantation forests must have a far higher yield of timber than their natural counterparts, on much shorter rotation times. To achieve this in reasonable time, biotechnology must be applied to the tree-improvement process, for which large increases in public and private capital investment are needed. However, additional obstacles exist in the form of opposition to plantations, some forest ecocertification schemes, and concerns about aspects of forest biotechnology, especially genetic engineering. It is the intention of this article to explain, in detail, why plantation forests are needed to sustainably meet the world's demand for wood, why they are not being developed fast enough, and why the application of biotechnology to tree improvement is essential to speeding up this process.

Biological and environmental controls on tree transpiration in a suburban landscape

NASA Astrophysics Data System (ADS)

Peters, Emily B.; McFadden, Joseph P.; Montgomery, Rebecca A.

2010-12-01

Tree transpiration provides a variety of ecosystem services in urban areas, including amelioration of urban heat island effects and storm water management. Tree species vary in the magnitude and seasonality of transpiration owing to differences in physiology, response to climate, and biophysical characteristics, thereby complicating efforts to manage evapotranspiration at city scales. We report sap flux measurements during the 2007 and 2008 growing seasons for dominant tree species in a suburban neighborhood of Minneapolis-Saint Paul, Minnesota, USA. Evergreen needleleaf trees had significantly higher growing season means and annual transpiration per unit canopy area (1.90 kg H2O m-2 d-1 and 307 kg H2O m-2 yr-1, respectively) than deciduous broadleaf trees (1.11 kg H2O m-2 d-1 and 153 kg H2O m-2 yr-1, respectively) because of a smaller projected canopy area (31.1 and 73.6 m2, respectively), a higher leaf area index (8.8 and 5.5 m2 m-2, respectively), and a longer growth season (8 and 4 months, respectively). Measurements also showed patterns consistent with the species' differences in xylem anatomy (conifer, ring porous, and diffuse porous). As the growing season progressed, conifer and diffuse porous genera had increased stomatal regulation to high vapor pressure deficit, while ring porous genera maintained greater and more constant stomatal regulation. These results suggest that evaporative responses to climate change in urban ecosystems will depend in part on species composition. Overall, plant functional type differences in canopy structure and growing season length were most important in explaining species' differences in midsummer and annual transpiration, offering an approach to predicting the evapotranspiration component of urban water budgets.

Growth trends in pruned red spruce trees

Treesearch

Barton M. Blum; Dale S. Solomon

1980-01-01

The diameter growth of red spruce with 1/6, 1/3, and 1/2 crown removed was compared with that of unpruned trees for 18 growing seasons. Although removal of 1/6 of the live crown did not adversely affect annual radial growth, compared with that of the controls, removal of 1/3 and 1/2 had a significant effect on the cumulative radial growth for 2 and 9 growing seasons,...

Influence of precommercial thinning and fertilization on total stem volume and lower stem form of loblolly pine

Treesearch

James D. Haywood

2005-01-01

Two cultural treatments were applied in an overstocked loblolly pine (Pinus taeda L.) plantaiton (2,900 trees/ha after eight growing seasons): precommercial thinning (Yes or no) to 747 trees/ha after the eighth growing season and broadcast fertilization (yes or no) with diammonium phosphate (150 kg/ha of P and 135 kg/ha of N) early in the ninth...

Age-related changes in tree growth and physiology

Treesearch

Andrew Groover

2017-01-01

Trees pass through specific developmental phases as they age, including juvenile to adult, and vegetative to reproductive phases. The timing of these transitions is regulated genetically but is also highly influenced by the environment. Tree species have evolved different strategies and life histories that affect how they age – for example some pioneer species are fast...

A Technical Guide to Urban Community Forestry: Urban and Community Forestry: Improving Our Quality of Life

Treesearch

USDA Forest Service

1993-01-01

Trees growing within cities and towns form a forest-an urban forest. But urban trees require special attention, because they are expected to exist within the urban environment. With its infrastructure of streets, sidewalks, curbs, buried utilities, overhead power lines and buildings, the urban environment places tremendous stresses on trees. With proper care, trees...

Crown structure and growth efficiency of red spruce in uneven-aged, mixed-species stands in Maine

Treesearch

Douglas A. Maguire; John C. Brissette; Lianhong. Gu

1998-01-01

Several hypotheses about the relationships among individual tree growth, tree leaf area, and relative tree size or position were tested with red spruce (Picea rubens Sarg.) growing in uneven-aged, mixed-species forests of south-central Maine, U.S.A. Based on data from 65 sample trees, predictive models were developed to (i)...

Tree species migration studies in the White Mountains of New Hampshire

Treesearch

William B. Leak; Mariko Yamasaki

2012-01-01

The movement of tree species in either latitude or elevation has attracted increased recent attention due to growing national/international concerns over climate change. However, studies on tree species movements began in the early 1970s in the White Mountains of New Hampshire, mostly due to ecological interests in the episodic behavior of upper-elevation tree species...

A Multipurpose Tree for Puerto Rico

Treesearch

Martin Chudnoff; C. B. Briscoe

1965-01-01

Cadam (Anthocaephalus cadamba Miq.) grows very rapidly on a wide variety of sited in Puerto Rico. Tree form is excellent, seed is produced in abundance every year by mature trees, planting is easy and cheap, and relatively little care is required after planting. No important attacks of insects of disease have occurred on trees grown in Puerto Rico for 35 years. The...

Tree production in desert regions using effluent and water harvesting

Treesearch

Martin M. Karpiscak; Gerald J. Gottfried

2000-01-01

Treated municipal effluent combined with water harvesting can be used for land restoration and enhancing the growth of important riparian tree species. Paired studies in Arizona are assessing the potential of growing trees using mixtures of effluent and potable water. Trees are grown in the field and in containers. Initial results from the field show high survival for...

Liberation: Acceptable production of tropical forest timber.

Treesearch

Frank H. Wadsworth; Johan Zweede

2006-01-01

Reduced impact logging in an eastern Amazonian terra firme forest left more than half of the next crop trees growing at a rate corresponding to a rotation of more than a century to attain 60-cm dbh. Two years after the logging, in 20 ha of the logged forest, tree competitors around crop trees were eliminated. Competitors were defined as trees whose crowns overtopped...

Reviews and syntheses: on the roles trees play in building and plumbing the critical zone

NASA Astrophysics Data System (ADS)

Brantley, Susan L.; Eissenstat, David M.; Marshall, Jill A.; Godsey, Sarah E.; Balogh-Brunstad, Zsuzsanna; Karwan, Diana L.; Papuga, Shirley A.; Roering, Joshua; Dawson, Todd E.; Evaristo, Jaivime; Chadwick, Oliver; McDonnell, Jeffrey J.; Weathers, Kathleen C.

2017-11-01

Trees, the most successful biological power plants on earth, build and plumb the critical zone (CZ) in ways that we do not yet understand. To encourage exploration of the character and implications of interactions between trees and soil in the CZ, we propose nine hypotheses that can be tested at diverse settings. The hypotheses are roughly divided into those about the architecture (building) and those about the water (plumbing) in the CZ, but the two functions are intertwined. Depending upon one's disciplinary background, many of the nine hypotheses listed below may appear obviously true or obviously false. (1) Tree roots can only physically penetrate and biogeochemically comminute the immobile substrate underlying mobile soil where that underlying substrate is fractured or pre-weathered. (2) In settings where the thickness of weathered material, H, is large, trees primarily shape the CZ through biogeochemical reactions within the rooting zone. (3) In forested uplands, the thickness of mobile soil, h, can evolve toward a steady state because of feedbacks related to root disruption and tree throw. (4) In settings where h ≪ H and the rates of uplift and erosion are low, the uptake of phosphorus into trees is buffered by the fine-grained fraction of the soil, and the ultimate source of this phosphorus is dust. (5) In settings of limited water availability, trees maintain the highest length density of functional roots at depths where water can be extracted over most of the growing season with the least amount of energy expenditure. (6) Trees grow the majority of their roots in the zone where the most growth-limiting resource is abundant, but they also grow roots at other depths to forage for other resources and to hydraulically redistribute those resources to depths where they can be taken up more efficiently. (7) Trees rely on matrix water in the unsaturated zone that at times may have an isotopic composition distinct from the gravity-drained water that transits from the hillslope to groundwater and streamflow. (8) Mycorrhizal fungi can use matrix water directly, but trees can only use this water by accessing it indirectly through the fungi. (9) Even trees growing well above the valley floor of a catchment can directly affect stream chemistry where changes in permeability near the rooting zone promote intermittent zones of water saturation and downslope flow of water to the stream. By testing these nine hypotheses, we will generate important new cross-disciplinary insights that advance CZ science.

Reviews and syntheses: on the roles trees play in building and plumbing the critical zone

DOE PAGES

Brantley, Susan L.; Eissenstat, David M.; Marshall, Jill A.; ...

2017-11-17

Trees, the most successful biological power plants on earth, build and plumb the critical zone (CZ) in ways that we do not yet understand. To encourage exploration of the character and implications of interactions between trees and soil in the CZ, we propose nine hypotheses that can be tested at diverse settings. The hypotheses are roughly divided into those about the architecture (building) and those about the water (plumbing) in the CZ, but the two functions are intertwined. Depending upon one's disciplinary background, many of the nine hypotheses listed below may appear obviously true or obviously false. (1) Tree roots can onlymore » physically penetrate and biogeochemically comminute the immobile substrate underlying mobile soil where that underlying substrate is fractured or pre-weathered. (2) In settings where the thickness of weathered material, H, is large, trees primarily shape the CZ through biogeochemical reactions within the rooting zone. (3) In forested uplands, the thickness of mobile soil, h, can evolve toward a steady state because of feedbacks related to root disruption and tree throw. (4) In settings where h \\11 H and the rates of uplift and erosion are low, the uptake of phosphorus into trees is buffered by the fine-grained fraction of the soil, and the ultimate source of this phosphorus is dust. (5) In settings of limited water availability, trees maintain the highest length density of functional roots at depths where water can be extracted over most of the growing season with the least amount of energy expenditure. (6) Trees grow the majority of their roots in the zone where the most growth-limiting resource is abundant, but they also grow roots at other depths to forage for other resources and to hydraulically redistribute those resources to depths where they can be taken up more efficiently. (7) Trees rely on matrix water in the unsaturated zone that at times may have an isotopic composition distinct from the gravity-drained water that transits from the hillslope to groundwater and streamflow. (8) Mycorrhizal fungi can use matrix water directly, but trees can only use this water by accessing it indirectly through the fungi. (9) Even trees growing well above the valley floor of a catchment can directly affect stream chemistry where changes in permeability near the rooting zone promote intermittent zones of water saturation and downslope flow of water to the stream. By testing these nine hypotheses, we will generate important new cross-disciplinary insights that advance CZ science.« less

Reviews and syntheses: on the roles trees play in building and plumbing the critical zone

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brantley, Susan L.; Eissenstat, David M.; Marshall, Jill A.

Trees, the most successful biological power plants on earth, build and plumb the critical zone (CZ) in ways that we do not yet understand. To encourage exploration of the character and implications of interactions between trees and soil in the CZ, we propose nine hypotheses that can be tested at diverse settings. The hypotheses are roughly divided into those about the architecture (building) and those about the water (plumbing) in the CZ, but the two functions are intertwined. Depending upon one's disciplinary background, many of the nine hypotheses listed below may appear obviously true or obviously false. (1) Tree roots can onlymore » physically penetrate and biogeochemically comminute the immobile substrate underlying mobile soil where that underlying substrate is fractured or pre-weathered. (2) In settings where the thickness of weathered material, H, is large, trees primarily shape the CZ through biogeochemical reactions within the rooting zone. (3) In forested uplands, the thickness of mobile soil, h, can evolve toward a steady state because of feedbacks related to root disruption and tree throw. (4) In settings where h \\11 H and the rates of uplift and erosion are low, the uptake of phosphorus into trees is buffered by the fine-grained fraction of the soil, and the ultimate source of this phosphorus is dust. (5) In settings of limited water availability, trees maintain the highest length density of functional roots at depths where water can be extracted over most of the growing season with the least amount of energy expenditure. (6) Trees grow the majority of their roots in the zone where the most growth-limiting resource is abundant, but they also grow roots at other depths to forage for other resources and to hydraulically redistribute those resources to depths where they can be taken up more efficiently. (7) Trees rely on matrix water in the unsaturated zone that at times may have an isotopic composition distinct from the gravity-drained water that transits from the hillslope to groundwater and streamflow. (8) Mycorrhizal fungi can use matrix water directly, but trees can only use this water by accessing it indirectly through the fungi. (9) Even trees growing well above the valley floor of a catchment can directly affect stream chemistry where changes in permeability near the rooting zone promote intermittent zones of water saturation and downslope flow of water to the stream. By testing these nine hypotheses, we will generate important new cross-disciplinary insights that advance CZ science.« less

Host tree phenology affects vascular epiphytes at the physiological, demographic and community level

PubMed Central

Einzmann, Helena J. R.; Beyschlag, Joachim; Hofhansl, Florian; Wanek, Wolfgang; Zotz, Gerhard

2015-01-01

The processes that govern diverse tropical plant communities have rarely been studied in life forms other than trees. Structurally dependent vascular epiphytes, a major part of tropical biodiversity, grow in a three-dimensional matrix defined by their hosts, but trees differ in their architecture, bark structure/chemistry and leaf phenology. We hypothesized that the resulting seasonal differences in microclimatic conditions in evergreen vs. deciduous trees would affect epiphytes at different levels, from organ physiology to community structure. We studied the influence of tree leaf phenology on vascular epiphytes on the Island of Barro Colorado, Panama. Five tree species were selected, which were deciduous, semi-deciduous or evergreen. The crowns of drought-deciduous trees, characterized by sunnier and drier microclimates, hosted fewer individuals and less diverse epiphyte assemblages. Differences were also observed at a functional level, e.g. epiphyte assemblages in deciduous trees had larger proportions of Crassulacean acid metabolism species and individuals. At the population level a drier microclimate was associated with lower individual growth and survival in a xerophytic fern. Some species also showed, as expected, lower specific leaf area and higher δ13C values when growing in deciduous trees compared with evergreen trees. As hypothesized, host tree leaf phenology influences vascular epiphytes at different levels. Our results suggest a cascading effect of tree composition and associated differences in tree phenology on the diversity and functioning of epiphyte communities in tropical lowland forests. PMID:25392188

Peanut Allergy

MedlinePlus

... of reactions. Learn more here. Milk Egg Peanut Tree Nuts Soy Wheat Fish Shellfish Sesame Other Food ... food allergies. Peanuts are not the same as tree nuts (almonds, cashews, walnuts, etc.), which grow on ...

Plant defense, herbivory, and the growth of Cordia alliodora trees and their symbiotic Azteca ant colonies.

PubMed

Pringle, Elizabeth G; Dirzo, Rodolfo; Gordon, Deborah M

2012-11-01

The effects of herbivory on plant fitness are integrated over a plant's lifetime, mediated by ontogenetic changes in plant defense, tolerance, and herbivore pressure. In symbiotic ant-plant mutualisms, plants provide nesting space and food for ants, and ants defend plants against herbivores. The benefit to the plant of sustaining the growth of symbiotic ant colonies depends on whether defense by the growing ant colony outpaces the plant's growth in defendable area and associated herbivore pressure. These relationships were investigated in the symbiotic mutualism between Cordia alliodora trees and Azteca pittieri ants in a Mexican tropical dry forest. As ant colonies grew, worker production remained constant relative to ant-colony size. As trees grew, leaf production increased relative to tree size. Moreover, larger trees hosted lower densities of ants, suggesting that ant-colony growth did not keep pace with tree growth. On leaves with ants experimentally excluded, herbivory per unit leaf area increased exponentially with tree size, indicating that larger trees experienced higher herbivore pressure per leaf area than smaller trees. Even with ant defense, herbivory increased with tree size. Therefore, although larger trees had larger ant colonies, ant density was lower in larger trees, and the ant colonies did not provide sufficient defense to compensate for the higher herbivore pressure in larger trees. These results suggest that in this system the tree can decrease herbivory by promoting ant-colony growth, i.e., sustaining space and food investment in ants, as long as the tree continues to grow.

Functional traits enhance invasiveness of bamboos over co-occurring tree saplings in the semideciduous Atlantic Forest

NASA Astrophysics Data System (ADS)

Montti, Lía; Villagra, Mariana; Campanello, Paula I.; Gatti, M. Genoveva; Goldstein, Guillermo

2014-01-01

Many woody bamboo species are forest understory plants that become invasive after disturbance. They can grow rapidly forming a dense, nearly monospecific understory that inhibits tree regeneration. The principal aim of this study was to understand what functional traits of bamboos allow them to outcompete tree seedlings and saplings and become successful species in the semideciduous Atlantic Forests of northeastern Argentina. We studied leaf and whole-plant functional traits of two bamboo species of the genus Chusquea and five co-occurring saplings of common tree species growing under similar solar radiation and soil nutrient availabilities. Nutrient addition had no effect on bamboo or tree sapling survival and growth after two years. Tree species with high-light requirements had higher growth rates and developed relatively thin leaves with high photosynthetic capacity per unit leaf area and short leaf life-span when growing in gaps, but had lower survival rates in the understory. The opposite pattern was observed in shade-tolerant species that were able to survive in the understory but had lower photosynthetic capacity and growth than light-requiring species in gaps. Bamboos exhibited a high plasticity in functional traits and leaf characteristics that enabled them to grow rapidly in gaps (e.g., higher photosynthetic capacity per unit dry mass and clonal reproduction in gaps than in the understory) but at the same time to tolerate closed-canopy conditions (they had thinner leaves and a relatively longer leaf life-span in the understory compared to gaps). Photosynthetic capacity per unit dry mass was higher in bamboos than in trees. Bamboo plasticity in key functional traits, such as clonal reproduction at the plant level and leaves with a relatively low C cost and high photosynthesis rates, allows them to colonize disturbed forests with consequences at the community and ecosystem levels. Increasing disturbance in some forests worldwide will likely enhance bamboo invasion resulting in profound negative impacts on forest diversity, structure and function in the long term.

29 CFR 780.159 - Forest products.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Other Unlisted Practices Which May Be within Section 3(f) § 780.159 Forest products. Trees grown in... purpose of the FLSA. (See § 780.205 regarding production of Christmas trees.) It follows that employment in the production, cultivation, growing, and harvesting of such trees or timber products is not...

7 CFR 1437.201 - Prevented planting acreage.

Code of Federal Regulations, 2010 CFR

2010-01-01

... includes, but is not limited to: (1) Value-loss crops, including, but not limited to, Christmas trees, aquaculture, and ornamental nursery; (2) Tree crops and other perennials, unless: (i) The producer can prove resources unique to the planting of tree crops and other perennials were available to plant, grow, and...

Growing black walnut for nut production

Treesearch

William Reid; Mark Coggeshall; H.E. Garrett; Jerry. Van Sambeek

2009-01-01

Eastern black walnut trees (Juglans nigra) produce high-value, hardwood products and distinctively flavored, edible nuts. The potential for producting two valuable products from the same tree has captured the imagination of tree planters for years. Both large and small black walnut plantations have been established with the intent to harvest huge nut...

7 CFR 701.205 - Land eligibility.

Code of Federal Regulations, 2011 CFR

2011-01-01

... and must, as determined by FSA: (1) Have existing tree cover or have had tree cover immediately before the natural disaster and be suitable for growing trees; (2) Have damage to natural resources caused by... (3) Be physically located in a county in which EFRP has been implemented. (b) Land is ineligible for...

29 CFR 780.159 - Forest products.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Other Unlisted Practices Which May Be within Section 3(f) § 780.159 Forest products. Trees grown in... purpose of the FLSA. (See § 780.205 regarding production of Christmas trees.) It follows that employment in the production, cultivation, growing, and harvesting of such trees or timber products is not...

7 CFR 701.205 - Land eligibility.

Code of Federal Regulations, 2012 CFR

2012-01-01

... and must, as determined by FSA: (1) Have existing tree cover or have had tree cover immediately before the natural disaster and be suitable for growing trees; (2) Have damage to natural resources caused by... (3) Be physically located in a county in which EFRP has been implemented. (b) Land is ineligible for...

29 CFR 780.159 - Forest products.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Other Unlisted Practices Which May Be within Section 3(f) § 780.159 Forest products. Trees grown in... purpose of the FLSA. (See § 780.205 regarding production of Christmas trees.) It follows that employment in the production, cultivation, growing, and harvesting of such trees or timber products is not...

7 CFR 701.205 - Land eligibility.

Code of Federal Regulations, 2014 CFR

2014-01-01

... and must, as determined by FSA: (1) Have existing tree cover or have had tree cover immediately before the natural disaster and be suitable for growing trees; (2) Have damage to natural resources caused by... (3) Be physically located in a county in which EFRP has been implemented. (b) Land is ineligible for...

29 CFR 780.159 - Forest products.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Other Unlisted Practices Which May Be within Section 3(f) § 780.159 Forest products. Trees grown in... purpose of the FLSA. (See § 780.205 regarding production of Christmas trees.) It follows that employment in the production, cultivation, growing, and harvesting of such trees or timber products is not...

29 CFR 780.159 - Forest products.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Other Unlisted Practices Which May Be within Section 3(f) § 780.159 Forest products. Trees grown in... purpose of the FLSA. (See § 780.205 regarding production of Christmas trees.) It follows that employment in the production, cultivation, growing, and harvesting of such trees or timber products is not...

7 CFR 701.205 - Land eligibility.

Code of Federal Regulations, 2013 CFR

2013-01-01

... and must, as determined by FSA: (1) Have existing tree cover or have had tree cover immediately before the natural disaster and be suitable for growing trees; (2) Have damage to natural resources caused by... (3) Be physically located in a county in which EFRP has been implemented. (b) Land is ineligible for...

Analysis of the costs of fuel supply for wood-fired electric power plants in rural Liberia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Perlack, R.D.; Barron, W.F.; Samuels, G.

1985-06-01

In recent years the quality of rural electric services in Liberia has been declining and the future economic viability of these power stations is a growing concern. Each of the ten operating and each of the planned rural public power stations is designed to operate exclusively on gas oil (diesel fuel). Fuel expenditures by the Liberian Electricity Corporation (LEC) for the rural public stations represent a major and growing burden on the financially hardpressed utility. Liberia has two potentially significant alternatives to oil-fired electric power for its up-country towns: small (1 to 5 MW) hydroelectric facilities, and wood-fired steam ormore » gasifier plants (0.2 to 2 MW). Although small hydroelectric facilities appear viable for several locations, they cannot serve all locations and will require thermal back-up. The economics of supplying wood to a rural electric power plant or rural grid were evaluated under several scenarios involving: (1) different sources of the feedstock, and (2) differences in wood supply requirements for plants based on the use of steam or gasifier technology, and variation in the utilization level for such plants. With a few minor exceptions, wood energy supplies are plentiful throughout Liberia. Liberia has four different potential sources of wood fuel supply: the commercial cutting of retired rubber trees; the harvesting of secondary growth forest just prior to the land returning to temporary cultivation as part of a system of shifting agriculture; adding to the system of shifting agriculture the planting of fast-growing wood species and harvesting these trees when the land again is brought back under cultivation (generally after about five to seven years); and the establishment of commercial short-rotation wood energy plantations. Results indicate that the use of wood to fuel rural power stations is a viable economic option.« less

Application Research of Fault Tree Analysis in Grid Communication System Corrective Maintenance

NASA Astrophysics Data System (ADS)

Wang, Jian; Yang, Zhenwei; Kang, Mei

2018-01-01

This paper attempts to apply the fault tree analysis method to the corrective maintenance field of grid communication system. Through the establishment of the fault tree model of typical system and the engineering experience, the fault tree analysis theory is used to analyze the fault tree model, which contains the field of structural function, probability importance and so on. The results show that the fault tree analysis can realize fast positioning and well repairing of the system. Meanwhile, it finds that the analysis method of fault tree has some guiding significance to the reliability researching and upgrading f the system.

A fast algorithm for identifying friends-of-friends halos

NASA Astrophysics Data System (ADS)

Feng, Y.; Modi, C.

2017-07-01

We describe a simple and fast algorithm for identifying friends-of-friends features and prove its correctness. The algorithm avoids unnecessary expensive neighbor queries, uses minimal memory overhead, and rejects slowdown in high over-density regions. We define our algorithm formally based on pair enumeration, a problem that has been heavily studied in fast 2-point correlation codes and our reference implementation employs a dual KD-tree correlation function code. We construct features in a hierarchical tree structure, and use a splay operation to reduce the average cost of identifying the root of a feature from O [ log L ] to O [ 1 ] (L is the size of a feature) without additional memory costs. This reduces the overall time complexity of merging trees from O [ L log L ] to O [ L ] , reducing the number of operations per splay by orders of magnitude. We next introduce a pruning operation that skips merge operations between two fully self-connected KD-tree nodes. This improves the robustness of the algorithm, reducing the number of merge operations in high density peaks from O [δ2 ] to O [ δ ] . We show that for cosmological data set the algorithm eliminates more than half of merge operations for typically used linking lengths b ∼ 0 . 2 (relative to mean separation). Furthermore, our algorithm is extremely simple and easy to implement on top of an existing pair enumeration code, reusing the optimization effort that has been invested in fast correlation function codes.

Enzymatic Basis for Differentiation of Rhizobium into Fast- and Slow-Growing Groups

PubMed Central

Drets, G. Martinez-De; Arias, A.

1972-01-01

Glucose-6-phosphate dehydrogenase, 6-phosphogluconate dehydrogenase, and other enzymes related to carbohydrate metabolism were studied in rhizobia. A nicotinamide adenine dinucleotide phosphate-6-phosphogluconate dehydrogenase was detected in strains of the fast-growing group of Rhizobium but not in strains of the slow-growing group. An enzymatic differentiation of rhizobia was established. PMID:4400417

Sea, soil, sky - Testing solar's limits

NASA Astrophysics Data System (ADS)

Hopkinson, J.

1981-12-01

The potentials and actualities of large scale biomass, ocean thermal, and satellite solar power systems are discussed. Biomass is an energy already on-line in installations ranging from home-sized wood-burning stoves to utility sized generators fueled by sawdust and forest residue. Uses of wheat straw, fast-growing trees such as eucalyptus and alder, and euphorbia as biofuels are examined, noting restrictions imposed by land use limitations and the necessity for genetic engineering for more suitable plants. Pyrolysis and thermochemical gasification of biomass to form gaseous, solid, and liquid fuels are explored, and mention is made of utility refuse and sewage incineration for power generation. OTEC, satellite solar power systems, and tidal generator plants are considered as promising for further investigation and perhaps useful in limited applications, while solar pond power plants require extremely large areas to be effective.

Comparison of Rooting Strategies to Explore Rock Fractures for Shallow Soil-Adapted Tree Species with Contrasting Aboveground Growth Rates: A Greenhouse Microcosm Experiment.

PubMed

Nie, Yunpeng; Chen, Hongsong; Ding, Yali; Yang, Jing; Wang, Kelin

2017-01-01

For tree species adapted to shallow soil environments, rooting strategies that efficiently explore rock fractures are important because soil water depletion occurs frequently. However, two questions: (a) to what extent shallow soil-adapted species rely on exploring rock fractures and (b) what outcomes result from drought stress, have rarely been tested. Therefore, based on the expectation that early development of roots into deep soil layers is at the cost of aboveground growth, seedlings of three tree species ( Cyclobalanopsis glauca, Delavaya toxocarpa , and Acer cinnamomifolium ) with distinct aboveground growth rates were selected from a typical shallow soil region. In a greenhouse experiment that mimics the basic features of shallow soil environments, 1-year-old seedlings were transplanted into simulated microcosms of shallow soil overlaying fractured bedrock. Root biomass allocation and leaf physiological activities, as well as leaf δ 13 C values were investigated and compared for two treatments: regular irrigation and repeated cycles of drought stress. Our results show that the three species differed in their rooting strategies in the context of encountering rock fractures, however, these strategies were not closely related to the aboveground growth rate. For the slowest-growing seedling, C. glauca , percentages of root mass in the fractures, as well as in the soil layer between soil and bedrock increased significantly under both treatments, indicating a specialized rooting strategy that facilitated the exploration of rock fractures. Early investment in deep root growth was likely critical to the establishment of this drought-vulnerable species. For the intermediate-growing, A. cinnamomifolium , percentages of root mass in the bedrock and interface soil layers were relatively low and exhibited no obvious change under either treatment. This limited need to explore rock fractures was compensated by a conservative water use strategy. For the fast-growing, D. toxocarpa , percentages of root mass in the bedrock and interface layers increased simultaneously under drought conditions, but not under irrigated conditions. This drought-induced rooting plasticity was associated with drought avoidance by this species. Although, root development might have been affected by the simulated microcosm, contrasting results among the three species indicated that efficient use of rock fractures is not a necessary or specialized strategy of shallow-soil adapted species. The establishment and persistence of these species relied on the mutual complementation between their species-specific rooting strategies and drought adaptations.

Going beyond the green: senesced vegetation material predicts basal area and biomass in remote sensing of tree cover conditions in an African tropical dry forest (miombo woodland) landscape

NASA Astrophysics Data System (ADS)

Mayes, Marc; Mustard, John; Melillo, Jerry; Neill, Christopher; Nyadzi, Gerson

2017-08-01

In sub-Saharan Africa (SSA), tropical dry forests and savannas cover over 2.5 million km2 and support livelihoods for millions in fast-growing nations. Intensifying land use pressures have driven rapid changes in tree cover structure (basal area, biomass) that remain poorly characterized at regional scales. Here, we posed the hypothesis that tree cover structure related strongly to senesced and non-photosynthetic (NPV) vegetation features in a SSA tropical dry forest landscape, offering improved means for satellite remote sensing of tree cover structure compared to vegetation greenness-based methods. Across regrowth miombo woodland sites in Tanzania, we analyzed relationships among field data on tree structure, land cover, and satellite indices of green and NPV features based on spectral mixture analyses and normalized difference vegetation index calculated from Landsat 8 data. From satellite-field data relationships, we mapped regional basal area and biomass using NPV and greenness-based metrics, and compared map performances at landscape scales. Total canopy cover related significantly to stem basal area (r 2 = 0.815, p < 0.01) and biomass (r 2 = 0.635, p < 0.01), and NPV dominated ground cover (> 60%) at all sites. From these two conditions emerged a key inverse relationship: skyward exposure of NPV ground cover was high at sites with low tree basal area and biomass, and decreased with increasing stem basal area and biomass. This pattern scaled to Landsat NPV metrics, which showed strong inverse correlations to basal area (Pearson r = -0.85, p < 0.01) and biomass (r = -0.86, p < 0.01). Biomass estimates from Landsat NPV-based maps matched field data, and significantly differentiated landscape gradients in woody biomass that greenness metrics failed to track. The results suggest senesced vegetation metrics at Landsat scales are a promising means for improved monitoring of tree structure across disturbance and ecological gradients in African and other tropical dry forests.

Water transport through tall trees: A vertically-explicit, analytical model of xylem hydraulic conductance in stems.

PubMed

Couvreur, Valentin; Ledder, Glenn; Manzoni, Stefano; Way, Danielle A; Muller, Erik B; Russo, Sabrina E

2018-05-08

Trees grow by vertically extending their stems, so accurate stem hydraulic models are fundamental to understanding the hydraulic challenges faced by tall trees. Using a literature survey, we showed that many tree species exhibit continuous vertical variation in hydraulic traits. To examine the effects of this variation on hydraulic function, we developed a spatially-explicit, analytical water transport model for stems. Our model allows Huber ratio, stem-saturated conductivity, pressure at 50% loss of conductivity, leaf area, and transpiration rate to vary continuously along the hydraulic path. Predictions from our model differ from a matric flux potential model parameterized with uniform traits. Analyses show that cavitation is a whole-stem emergent property resulting from nonlinear pressure-conductivity feedbacks that, with gravity, cause impaired water transport to accumulate along the path. Because of the compounding effects of vertical trait variation on hydraulic function, growing proportionally more sapwood and building tapered xylem with height, as well as reducing xylem vulnerability only at branch tips while maintaining transport capacity at the stem base, can compensate for these effects. We therefore conclude that the adaptive significance of vertical variation in stem hydraulic traits is to allow trees to grow tall and tolerate operating near their hydraulic limits. This article is protected by copyright. All rights reserved.

Proposed Hydrodynamic Model Increases the Ability of Land-Surface Models to Capture Intra-Daily Dynamics of Transpiration and Canopy Structure Effects

NASA Astrophysics Data System (ADS)

Matheny, A. M.; Bohrer, G.; Mirfenderesgi, G.; Schafer, K. V.; Ivanov, V. Y.

2014-12-01

Hydraulic limitations are known to control transpiration in forest ecosystems when the soil is drying or when the vapor pressure deficit between the air and stomata is very large, but they can also impact stomatal apertures under conditions of adequate soil moisture and lower evaporative demand. We use the NACP dataset of latent heat flux measurements and model observations for multiple sites and models to demonstrate models' difficulties in capturing intra-daily hysteresis. We hypothesize that this is a result of un-resolved afternoon stomata closure due to hydrodynamic stresses. The current formulations for stomatal conductance and the empirical coupling between stomatal conductance and soil moisture used by these models does not resolve the hydrodynamic process of water movement from the soil to the leaves. This approach does not take advantage of advances in our understanding of water flow and storage in the trees, or of tree and canopy structure. A more thorough representation of the tree-hydrodynamic processes could potentially remedy this significant source of model error. In a forest plot at the University of Michigan Biological Station, we use measurements of sap flux and leaf water potential to demonstrate that trees of similar type - late successional deciduous trees - have very different hydrodynamic strategies that lead to differences in their temporal patterns of stomatal conductance and thus hysteretic cycles of transpiration. These differences will lead to large differences in conductance and water use based on the species composition of the forest. We also demonstrate that the size and shape of the tree branching system leads to differences in extent of hydrodynamic stress, which may change the forest respiration patterns as the forest grows and ages. We propose a framework to resolve tree hydrodynamics in global and regional models based on the Finite-Elements Tree-Crown Hydrodynamics model (FETCH) -a hydrodynamic model that can resolve the fast dynamics of stomatal conductance. FETCH simulates water flow through a tree as a system of porous media conduits and calculates the amount of hydraulic limitation to stomatal conductance, given the atmospheric and biological variables from the global model, and could replace the current empirical formulation for stomatal adjustment based on soil moisture.

Growth and mortality of bigtooth aspen trees stressed by defoliation

Treesearch

Donald D. Davis; Timothy M. Frontz

2003-01-01

A survey conducted by the authors in 1993 in six stands within an area of declining aspen revealed that aspen mortality ranged from 25 to 67 percent per stand. Tree-ring analyses revealed that trees dead at time of sampling in 1993 had been growing slower in four of the six stands during the previous decade than were the surviving trees. However growth declines had...

Growing quality of life: urban trees, birth weight, and crime

Treesearch

John Kirkland; Geoffrey Donovan

2011-01-01

City dwellers can find many reasons to value neighborhood trees. The urban greenery provides relief from the built environment that many find appealing. In fact, a previous study found that a tree in front of a home increased that home's sales price by more than $7,000. Two new studies explore the measurable effects that urban trees and green spaces have a human...

A diameter growth model for the SRS FIA

Treesearch

David Gartner

2015-01-01

Changes in the national Forest Inventory and Analysis (FIA) processing system required the Southern Research Station’s FIA unit to create a diameter growth model to estimate the growth of trees that could not be measured at both ends of a measurement interval. Examples of such trees are trees that have died or been harvested, and trees that grow over the minimum...

Regeneratoin Development 3 Years After Thinning and Fertilization in an East Texas Bottomland Hardwood Stand (To Manage or To Regenerate: Can We Do Both?)

Treesearch

Brian Roy Lockhart; Alexander J. Michalek; Matthew W. Lowe; Richard A. Williams

2004-01-01

Silviculture textbooks state that intermediate treatments, such as thinning, are prescribed to regulate the growing space for the benefit of existing trees and not to create enough growing space to initiate new trees of desirable species. If new, desirable regeneration develops, then it is considered a by-product of the intermediate treatment and is not to be managed,...

Growth, Producion, and Consumption of Forest Resources in the Upper Great Lakes Region of the United States

Treesearch

Stephen R. Shifley; Neal Sullivan

2001-01-01

The Lake States (MN, WI, MI) have 47 million acres of forest--36 percent of the total land area. Nearly all of that acreage is capable of producing commercial crops of timber. The growing stock volume on those forests is 60 billion cubic feet. In addition to growing stock volume there are 7 billion cubic feet of volume on trees of noncommercial species, trees with poor...

Patterns of Storage, Synthesis and Changing Light Levels Revealed by Carbon Isotope Microsampling within Eocene Metasequoia Tree Rings

NASA Astrophysics Data System (ADS)

Jahren, H.; Sternberg, L.

2005-12-01

Fossil tree rings from Axel Heiberg Island were microanalyzed for δ13C value in order to assess patterns of tree growth and carbon storage within the Middle Eocene (~45 Ma) Arctic paleoenvironment. Wood from four Metasequoia-type individuals was subsampled for analysis: each individual fossil consisted of between 4 and 10 large (~1 cm thick) consecutive tree rings. One of the fossils displayed an obvious concentric pattern, allowing for the determination of the direction of growth with isotopic pattern. Each ring was divided into ~1 mm thick subsamples, resulting in 5-10 δ13C value determinations per period of ring growth (i.e., growing season). All rings revealed a distinct pattern that was characteristic across growing seasons and across individual fossils. Early in the season, δ13C was at its highest value but descended systematically and sharply to its lowest value at the end of the growing season. Total decrease ranged between 3 and 5 ‰ over the course of each growing season. Identical patterns were observed in the δ13C value of alpha-cellulose isolated from each subsample, indicating that the trends observed did not represent changing levels of secondary metabolites, but rather a seasonal adjustment in the bulk source of carbon used during biosynthesis. Our results are consistent with the following annual pattern of wood synthesis 1.) complete dependence on the mobilization of stored carbon compounds early in the growing season; 2.) systematically increasing use of actively-acquired photosynthate during the growing season; 3.) complete reliance on active photosynthate by the end of the growing season. An additional and significant source of 13C discrimination is declining light levels late in the growing season, and likely contributes to the extreme pattern of δ13C decrease seen across each ring. Our results mimic those seen from modern broadleaf deciduous trees (Helle & Schlesser 2004), but differ from those seen in modern conifers (Barbour et al 2002), underlining the important influence of dormancy, storage and changing light levels on carbon cycling within the Paleogene polar forests. Helle & Schleser 2004: Plant, Cell and Environment 27:367-380. Barbour, Walcroft & Farquhar 2002: Plant, Cell and Environment 25: 1483-1499.

Water uptake of trees in a montane forest catchment and the geomorphological potential of root growth in Boulder Creek Critical Zone Observatory, Rocky Mountains, Colorado

NASA Astrophysics Data System (ADS)

Skeets, B.; Barnard, H. R.; Byers, A.

2011-12-01

The influence of vegetation on the hydrological cycle and the possible effect of roots in geomorphological processes are poorly understood. Gordon Gulch watershed in the Front Range of the Rocky Mountains, Colorado, is a montane climate ecosystem of the Boulder Creek Critical Zone Observatory whose study adds to the database of ecohydrological work in different climates. This work sought to identify the sources of water used by different tree species and to determine how trees growing in rock outcrops may contribute to the fracturing and weathering of rock. Stable isotopes (18O and 2H) were analyzed from water extracted from soil and xylem samples. Pinus ponderosa on the south-facing slope consumes water from deeper depths during dry periods and uses newly rain-saturated soils, after rainfall events. Pinus contorta on the north -facing slope shows a similar, expected response in water consumption, before and after rain. Two trees (Pinus ponderosa) growing within rock outcrops demonstrate water use from cracks replenished by new rains. An underexplored question in geomorphology is whether tree roots growing in rock outcrops contribute to long-term geomorphological processes by physically deteriorating the bedrock. The dominant roots of measured trees contributed approximately 30 - 80% of total water use, seen especially after rainfall events. Preliminary analysis of root growth rings indicates that root growth is capable of expanding rock outcrop fractures at an approximate rate of 0.6 - 1.0 mm per year. These results demonstrate the significant role roots play in tree physiological processes and in bedrock deterioration.

How fast will trees die? A transition matrix model of ash decline in forest stands infested by emerald ash borer

Treesearch

Kathleen S. Knight; Robert P. Long; Joanne Rebbeck; Annemarie Smith; Kamal Gandhi; Daniel A. Herms

2008-01-01

We recorded Fraxinus spp. tree health and other forest stand characteristics for 68 plots in 21 EAB-infested forest stands in Michigan and Ohio in 2005 and 2007. Fraxinus spp. were a dominant component of these stands, with more than 900 ash trees (including Fraxinus americana, Fraxinus pennsylvanica, Fraxinus profunda...

Response of dwarf mistletoe-infested ponderosa pine to thinning: 2. Dwarf mistletoe propagation.

Treesearch

Lewis F. Roth; James W. Barrett

1985-01-01

Propagation of dwarf mistletoe in ponderosa pine saplings is little influenced by thinning overly dense stands to 250 trees per acre. Numerous plants that appear soon after thinning develop from formerly latent plants in the suppressed under-story. Subsequently, dwarf mistletoe propagates nearly as fast as tree crowns enlarge but the rate differs widely among trees....

Application of a fast skyline computation algorithm for serendipitous searching problems

NASA Astrophysics Data System (ADS)

Koizumi, Kenichi; Hiraki, Kei; Inaba, Mary

2018-02-01

Skyline computation is a method of extracting interesting entries from a large population with multiple attributes. These entries, called skyline or Pareto optimal entries, are known to have extreme characteristics that cannot be found by outlier detection methods. Skyline computation is an important task for characterizing large amounts of data and selecting interesting entries with extreme features. When the population changes dynamically, the task of calculating a sequence of skyline sets is called continuous skyline computation. This task is known to be difficult to perform for the following reasons: (1) information of non-skyline entries must be stored since they may join the skyline in the future; (2) the appearance or disappearance of even a single entry can change the skyline drastically; (3) it is difficult to adopt a geometric acceleration algorithm for skyline computation tasks with high-dimensional datasets. Our new algorithm called jointed rooted-tree (JR-tree) manages entries using a rooted tree structure. JR-tree delays extend the tree to deep levels to accelerate tree construction and traversal. In this study, we presented the difficulties in extracting entries tagged with a rare label in high-dimensional space and the potential of fast skyline computation in low-latency cell identification technology.

Salt-driven interactions between Pistacia lentiscus and Salsola inermis.

PubMed

Barazani, Oz; Golan-Goldhirsh, Avi

2009-11-01

It can be learned from the Pistacia spp. germplasm collection (http://www.bgu.ac.il/pistacia) that the growth of Salsola inermis is inhibited in the vicinity of the evergreen Pistacia lentiscus, but not in the surroundings of the deciduous Pistacia atlantica and Pistacia chinensis. Irrigation of trees during the summer months increases soil salinity around the trees. It was therefore hypothesized that inhibition of S. inermis around P. lentiscus is related to depletion of salt in the vicinity of the latter species. A multi-approach experimental scheme was carried out which included soil edaphic characterization and germination tests. To test salt tolerance of P. lentiscus, plants were grown in a hydroponic system for a month in medium containing NaCl, while physiological and growth parameters were measured. Conductivity measurements in summer, during the growth season of S. inermis, indicated that soil salinity beneath deciduous Pistacia trees was significantly higher than that below P. lentiscus. Germination of S. inermis seeds on filter paper moistened with P. lentiscus low-conductivity soil filtrate was twice as high as that of the deciduous trees high-conductivity soil filtrates. Nevertheless, fresh and dry weights of mature S. inermis growing next to P. atlantica and P. chinensis were 2.9 to 4.8 times higher than those of plants growing in the vicinity of P. lentiscus. In a hydroponic system, no significant differences were found in growth parameters and stomatal conductance between P. lentiscus growing in control and salt treatments. It was therefore proposed that salt depletion in the vicinity of P. lentiscus inhibits the growth, but not germination, of S. inermis thus confirming the halophylic characteristics of this plant. The nature of Salsola-Pistacia interactions cannot be explained by allelopathic effects; hence, plausible salt-driven interactions were considered. Our data showed that S. inermis accumulated salt and has halophytic characteristics. Interestingly, germination of S. inermis was inhibited in medium containing salt, but the salt was obligatory for further growth, development, and fast biomass production. These results explained the observation of large biomass accumulation in the more saline soil around the deciduous P. atlantica and P. chinensis and the lack of development in the salt-depleted soil around the salt-tolerant accumulator P. lentiscus. Soil salinity around Pistacia trees critically affects the growth of S. inermis. Inhibition of S. inermis growth, but not germination, around the evergreen P. lentiscus, stems from the latter's ability to deplete salt from its surroundings. The results indicated that P. lentiscus is able to tolerate and accumulate salt, which we assume contributes to its wide distribution along the Mediterranean coast in Israel. Recommendations and perspectives While the phytoremediation potential of Salsola spp. has been explored to some extent, this of P. lentiscus has not been tested and proven before. The results suggest that the evergreen perennial salt-tolerant P. lentiscus can be recommended for horticulture purposes and soil stabilization in relatively saline environments.

Evapotranspiration of rubber ( Hevea brasiliensis ) cultivated at two plantation sites in Southeast Asia: RUBBER EVAPOTRANSPIRATION IN SE ASIA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Giambelluca, Thomas W.; Mudd, Ryan G.; Liu, Wen

The expansion of rubber (Hevea brasiliensis) cultivation to higher latitudes and higher elevations in southeast Asia is part of a dramatic shift in the direction of rural land cover change in the region toward more tree covered landscapes. To investigate the possible effects of increasing rubber cultivation in the region on ecosystem services including water cycling, eddy covariance towers were established to measure ecosystem fluxes within two rubber plantations, one each in Bueng Kan, northeastern Thailand, and Kampong Cham, central Cambodia. The results show that evapotranspiration (ET) at both sites is strongly related to variations in available energy and leafmore » area, and moderately controlled by soil moisture. Measured mean annual ET was 1128 and 1272 mm for the Thailand and Cambodia sites, respectively. After adjustment for energy closure, mean annual was estimated to be 1211 and 1459 mm yr at the Thailand and Cambodia sites, respectively. Based on these estimates and that of another site in Xishuangbanna, southwestern China, it appears that of rubber is higher than that of other tree dominated land covers in the region, including forest. While measurements by others in non rubber tropical ecosystems indicate that at high net radiation sites is at most only slightly higher than for sites with lower net radiation, mean annual rubber increases strongl with increasing net radiation across the three available rubber plantation observation sites. With the continued expansion of tree dominated land covers, including rubber cultivation, in southeast Asia, the possible association between commercially viable, fast growing tree crop species Giambelluca et al. Evapotranspiration of rubber (Havea brasiliensis) cultivated at two sites in southeast Asia and their relatively high water use raises concerns about potential effects on water and food security.« less

Geological Substrates Shape Tree Species and Trait Distributions in African Moist Forests

PubMed Central

Fayolle, Adeline; Engelbrecht, Bettina; Freycon, Vincent; Mortier, Frédéric; Swaine, Michael; Réjou-Méchain, Maxime; Doucet, Jean-Louis; Fauvet, Nicolas; Cornu, Guillaume; Gourlet-Fleury, Sylvie

2012-01-01

Background Understanding the factors that shape the distribution of tropical tree species at large scales is a central issue in ecology, conservation and forest management. The aims of this study were to (i) assess the importance of environmental factors relative to historical factors for tree species distributions in the semi-evergreen forests of the northern Congo basin; and to (ii) identify potential mechanisms explaining distribution patterns through a trait-based approach. Methodology/Principal Findings We analyzed the distribution patterns of 31 common tree species in an area of more than 700,000 km2 spanning the borders of Cameroon, the Central African Republic, and the Republic of Congo using forest inventory data from 56,445 0.5-ha plots. Spatial variation of environmental (climate, topography and geology) and historical factors (human disturbance) were quantified from maps and satellite records. Four key functional traits (leaf phenology, shade tolerance, wood density, and maximum growth rate) were extracted from the literature. The geological substrate was of major importance for the distribution of the focal species, while climate and past human disturbances had a significant but lesser impact. Species distribution patterns were significantly related to functional traits. Species associated with sandy soils typical of sandstone and alluvium were characterized by slow growth rates, shade tolerance, evergreen leaves, and high wood density, traits allowing persistence on resource-poor soils. In contrast, fast-growing pioneer species rarely occurred on sandy soils, except for Lophira alata. Conclusions/Significance The results indicate strong environmental filtering due to differential soil resource availability across geological substrates. Additionally, long-term human disturbances in resource-rich areas may have accentuated the observed patterns of species and trait distributions. Trait differences across geological substrates imply pronounced differences in population and ecosystem processes, and call for different conservation and management strategies. PMID:22905127

Seasonal Variation of Carbon Metabolism in the Cambial Zone of Eucalyptus grandis

PubMed Central

Budzinski, Ilara G. F.; Moon, David H.; Lindén, Pernilla; Moritz, Thomas; Labate, Carlos A.

2016-01-01

Eucalyptus species are the most widely hardwood planted in the world. It is one of the successful examples of commercial forestry plantation in Brazil and other tropical and subtropical countries. The tree is valued for its rapid growth, adaptability and wood quality. Wood formation is the result of cumulative annual activity of the vascular cambium. This cambial activity is generally related to the alternation of cold and warm, and/or dry and rainy seasons. Efforts have focused on analysis of cambial zone in response to seasonal variations in trees from temperate zones. However, little is known about the molecular changes triggered by seasonal variations in trees from tropical countries. In this work we attempted to establish a global view of seasonal alterations in the cambial zone of Eucalyptus grandis Hill ex Maiden, emphasizing changes occurring in the carbon metabolism. Using transcripts, proteomics and metabolomics we analyzed the tissues harvested in summer-wet and winter-dry seasons. Based on proteomics analysis, 70 proteins that changed in abundance were successfully identified. Transcripts for some of these proteins were analyzed and similar expression patterns were observed. We identified 19 metabolites differentially abundant. Our results suggest a differential reconfiguration of carbon partioning in E. grandis cambial zone. During summer, pyruvate is primarily metabolized via ethanolic fermentation, possibly to regenerate NAD+ for glycolytic ATP production and cellular maintenance. However, in winter there seems to be a metabolic change and we found that some sugars were highly abundant. Our results revealed a dynamic change in E. grandis cambial zone due to seasonality and highlight the importance of glycolysis and ethanolic fermentation for energy generation and maintenance in Eucalyptus, a fast growing tree. PMID:27446160

Forest biorefinery: Potential of poplar phytochemicals as value-added co-products.

PubMed

Devappa, Rakshit K; Rakshit, Sudip K; Dekker, Robert F H

2015-11-01

The global forestry industry after experiencing a market downturn during the past decade has now aimed its vision towards the integrated biorefinery. New business models and strategies are constantly being explored to re-invent the global wood and pulp/paper industry through sustainable resource exploitation. The goal is to produce diversified, innovative and revenue generating product lines using on-site bioresources (wood and tree residues). The most popular product lines are generally produced from wood fibers (biofuels, pulp/paper, biomaterials, and bio/chemicals). However, the bark and other tree residues like foliage that constitute forest wastes, still remain largely an underexploited resource from which extractives and phytochemicals can be harnessed as by-products (biopharmaceuticals, food additives and nutraceuticals, biopesticides, cosmetics). Commercially, Populus (poplar) tree species including hybrid varieties are cultivated as a fast growing bioenergy crop, but can also be utilized to produce bio-based chemicals. This review identifies and underlines the potential of natural products (phytochemicals) from Populus species that could lead to new business ventures in biorefineries and contribute to the bioeconomy. In brief, this review highlights the importance of by-products/co-products in forest industries, methods that can be employed to extract and purify poplar phytochemicals, the potential pharmaceutical and other uses of >160 phytochemicals identified from poplar species - their chemical structures, properties and bioactivities, the challenges and limitations of utilizing poplar phytochemicals, and potential commercial opportunities. Finally, the overall discussion and conclusion are made considering the recent biotechnological advances in phytochemical research to indicate the areas for future commercial applications from poplar tree species. Crown Copyright © 2015. Published by Elsevier Inc. All rights reserved.

Identification on commercialized products of AFLP markers able to discriminate slow- from fast-growing chicken strains.

PubMed

Fumière, Olivier; Dubois, Marc; Grégoire, Dimitrie; Théwis, André; Berben, Gilbert

2003-02-26

The European chicken meat market is characterized by numerous quality marks: "Label de Qualité Wallon" in Belgium, "Label Rouge" in France, denominations of geographical origin, organic agriculture, etc. Most of those certified productions have specifications requiring the use of slow-growing chicken strains. The amplified fragment length polymorphism (AFLP) technique has been used to search molecular markers able to discriminate slow-growing chicken strains from fast-growing ones and to authenticate certified products. Two pairs of restriction enzymes (EcoRI/MseI and EcoRI/TaqI) and 121 selective primer combinations were tested on individual DNA samples from chicken products essentially in carcass form that were ascribed as belonging to either slow- or fast-growing strains. Within the resulting fingerprints, two fragments were identified as type-strains specific markers. One primer combination gives a band (333 bp) that is specific for slow-growing chickens, and another primer pair generates a band (372 bp) that was found to be characteristic of fast-growing chickens. The two markers were isolated, cloned, and sequenced. The effectiveness and the specificity of the two interesting determinants were assessed on individuals of two well-known strains (ISA 657 and Cobb 500) and on commercialized products coming from various origins.

RS-Forest: A Rapid Density Estimator for Streaming Anomaly Detection.

PubMed

Wu, Ke; Zhang, Kun; Fan, Wei; Edwards, Andrea; Yu, Philip S

Anomaly detection in streaming data is of high interest in numerous application domains. In this paper, we propose a novel one-class semi-supervised algorithm to detect anomalies in streaming data. Underlying the algorithm is a fast and accurate density estimator implemented by multiple fully randomized space trees (RS-Trees), named RS-Forest. The piecewise constant density estimate of each RS-tree is defined on the tree node into which an instance falls. Each incoming instance in a data stream is scored by the density estimates averaged over all trees in the forest. Two strategies, statistical attribute range estimation of high probability guarantee and dual node profiles for rapid model update, are seamlessly integrated into RS-Forest to systematically address the ever-evolving nature of data streams. We derive the theoretical upper bound for the proposed algorithm and analyze its asymptotic properties via bias-variance decomposition. Empirical comparisons to the state-of-the-art methods on multiple benchmark datasets demonstrate that the proposed method features high detection rate, fast response, and insensitivity to most of the parameter settings. Algorithm implementations and datasets are available upon request.

RS-Forest: A Rapid Density Estimator for Streaming Anomaly Detection

PubMed Central

Wu, Ke; Zhang, Kun; Fan, Wei; Edwards, Andrea; Yu, Philip S.

2015-01-01

Anomaly detection in streaming data is of high interest in numerous application domains. In this paper, we propose a novel one-class semi-supervised algorithm to detect anomalies in streaming data. Underlying the algorithm is a fast and accurate density estimator implemented by multiple fully randomized space trees (RS-Trees), named RS-Forest. The piecewise constant density estimate of each RS-tree is defined on the tree node into which an instance falls. Each incoming instance in a data stream is scored by the density estimates averaged over all trees in the forest. Two strategies, statistical attribute range estimation of high probability guarantee and dual node profiles for rapid model update, are seamlessly integrated into RS-Forest to systematically address the ever-evolving nature of data streams. We derive the theoretical upper bound for the proposed algorithm and analyze its asymptotic properties via bias-variance decomposition. Empirical comparisons to the state-of-the-art methods on multiple benchmark datasets demonstrate that the proposed method features high detection rate, fast response, and insensitivity to most of the parameter settings. Algorithm implementations and datasets are available upon request. PMID:25685112

Ozone exposure, uptake, and response of different-sized black cherry trees

Treesearch

Todd S. Frederickson; John M. Skelly; Kim C. Steiner; Thomas E. Kolb

1996-01-01

Differences in exposure, uptake and relative sensitivity to ozone between seedling, sapling, and canopy black cherry (Prunus serotina Ehrh.) trees were characterized during two growing seasons in north central Pennsylvania. Open-grown trees of all sizes received a similar amount of ozone exposure. Seedlings had greater foliar ozone injury, expressed...

How to Grow and Maintain a Healthy Birch Tree

Treesearch

Steven Katovich; Robert Wawrzynski; Dennis Haugen; Barbara Spears

1997-01-01

This publication is targeted for the upper Midwestern states. However, much of the material discussed is relevant anywhere birch is grown as a landscape tree. Birch trees are prized for their outstanding bark characteristics and their graceful, delicate foliage. Numerous species and cultivars are used in landscapes, and almost all are distinctive in bark...

Flowering and fruiting of southern browse species

Treesearch

L.K. Halls

1973-01-01

Flowering and fruiting dates are reported for 14 browse species growing in the open and beneath trees in an east Texas pine-hardwood forest. Dates for individual species generally were not influenced by tree cover. In the open, plants generally produced fruit more consistently and abundantly and at an earlier age than beneath the trees.

Large trees losing out to drought

Treesearch

Michael G. Ryan

2015-01-01

Large trees provide many ecological services in forests. They provide seeds for reproduction and food, habitat for plants and animals, and shade for understory vegetation. Older trees and forests store large quantities of carbon, tend to release more water to streams than their more rapidly growing younger counterparts, and provide wood for human use. Mature...

A new fast method for inferring multiple consensus trees using k-medoids.

PubMed

Tahiri, Nadia; Willems, Matthieu; Makarenkov, Vladimir

2018-04-05

Gene trees carry important information about specific evolutionary patterns which characterize the evolution of the corresponding gene families. However, a reliable species consensus tree cannot be inferred from a multiple sequence alignment of a single gene family or from the concatenation of alignments corresponding to gene families having different evolutionary histories. These evolutionary histories can be quite different due to horizontal transfer events or to ancient gene duplications which cause the emergence of paralogs within a genome. Many methods have been proposed to infer a single consensus tree from a collection of gene trees. Still, the application of these tree merging methods can lead to the loss of specific evolutionary patterns which characterize some gene families or some groups of gene families. Thus, the problem of inferring multiple consensus trees from a given set of gene trees becomes relevant. We describe a new fast method for inferring multiple consensus trees from a given set of phylogenetic trees (i.e. additive trees or X-trees) defined on the same set of species (i.e. objects or taxa). The traditional consensus approach yields a single consensus tree. We use the popular k-medoids partitioning algorithm to divide a given set of trees into several clusters of trees. We propose novel versions of the well-known Silhouette and Caliński-Harabasz cluster validity indices that are adapted for tree clustering with k-medoids. The efficiency of the new method was assessed using both synthetic and real data, such as a well-known phylogenetic dataset consisting of 47 gene trees inferred for 14 archaeal organisms. The method described here allows inference of multiple consensus trees from a given set of gene trees. It can be used to identify groups of gene trees having similar intragroup and different intergroup evolutionary histories. The main advantage of our method is that it is much faster than the existing tree clustering approaches, while providing similar or better clustering results in most cases. This makes it particularly well suited for the analysis of large genomic and phylogenetic datasets.

Loss of a highly conserved sterile alpha motif domain gene (WEEP) results in pendulous branch growth in peach trees.

PubMed

Hollender, Courtney A; Pascal, Thierry; Tabb, Amy; Hadiarto, Toto; Srinivasan, Chinnathambi; Wang, Wanpeng; Liu, Zhongchi; Scorza, Ralph; Dardick, Chris

2018-05-15

Plant shoots typically grow upward in opposition to the pull of gravity. However, exceptions exist throughout the plant kingdom. Most conspicuous are trees with weeping or pendulous branches. While such trees have long been cultivated and appreciated for their ornamental value, the molecular basis behind the weeping habit is not known. Here, we characterized a weeping tree phenotype in Prunus persica (peach) and identified the underlying genetic mutation using a genomic sequencing approach. Weeping peach tree shoots exhibited a downward elliptical growth pattern and did not exhibit an upward bending in response to 90° reorientation. The causative allele was found to be an uncharacterized gene, Ppa013325 , having a 1.8-Kb deletion spanning the 5' end. This gene, dubbed WEEP , was predominantly expressed in phloem tissues and encodes a highly conserved 129-amino acid protein containing a sterile alpha motif (SAM) domain. Silencing WEEP in the related tree species Prunus domestica (plum) resulted in more outward, downward, and wandering shoot orientations compared to standard trees, supporting a role for WEEP in directing lateral shoot growth in trees. This previously unknown regulator of branch orientation, which may also be a regulator of gravity perception or response, provides insights into our understanding of how tree branches grow in opposition to gravity and could serve as a critical target for manipulating tree architecture for improved tree shape in agricultural and horticulture applications. Copyright © 2018 the Author(s). Published by PNAS.

Soil hydrology of agroforestry systems: Competition for water or positive tree-crops interactions?

NASA Astrophysics Data System (ADS)

Gerjets, Rowena; Richter, Falk; Jansen, Martin; Carminati, Andrea

2017-04-01

In dry periods during the growing season crops may suffer from severe water stress. The question arises whether the alternation of crop and tree strips might enhance and sustain soil water resources available for crops during drought events. Trees reduce wind exposure, decreasing the potential evapotranspiration of crops and soils; additionally hydraulic lift from the deep roots of trees to the drier top soil might provide additional water for shallow-rooted crops. To understand the above and belowground water relations of agroforestry systems, we measured soil moisture and soil water potential in crop strips as a function of distance to the trees at varying depth as well as meteorological parameters. At the agroforestry site Reiffenhausen, Lower Saxony, Germany, two different tree species are planted, each in one separated tree strip: willow breed Tordis ((Salix viminalis x Salix Schwerinii) x Salix viminalis) and poplar clone Max 1 (Populus nigra x Populus maximowiczii). In between the tree strips a crop strip of 24 m width was established with annual crop rotation, managed the same way as the reference site. During a drought period in May 2016 with less than 2 mm rain in four weeks, an overall positive effect on hydrological conditions of the agroforestry system was observed. The results show that trees shaded the soil surface, lowering the air temperature and further increasing the soil moisture in the crop strips compared to the reference site, which was located far from the trees. At the reference site the crops took up water in the upper soil (<20 cm depth); after the soil reached water potentials below -100 kPa, root water uptake moved to deeper soil layers (<40 cm). Because of the higher wind and solar radiation exposure the reference soil profile was severely dried out. Also in the crop strips of the agroforestry system, crops took up water in the upper soil. However, the lower soil layers remained wet for an extended period of time. The tree strips reduced the wind speed, hence lowering evapotranspiration in the crop strip. The plot was not aligned directly to North and we observed steeper soil water potential gradients in the part of the crop strip more exposed to sunlight. The two tree species behaved differently. The poplar strips showed more marked diurnal changes in soil water potential, with fast drying during daytime and rewetting during nighttime. We suppose that the rewetting during nighttime was caused by hydraulic lift, which supports passively the drier upper soil with water from the wetter, lower soil layers. This experimental study shows the importance of above- and belowground tree-crop interactions and demonstrate the positive effect of tree strips in reducing drought stress in crops.

Root biomechanics in Rhizophora mangle: anatomy, morphology and ecology of mangrove's flying buttresses.

PubMed

Méndez-Alonzo, Rodrigo; Moctezuma, Coral; Ordoñez, Víctor R; Angeles, Guillermo; Martínez, Armando J; López-Portillo, Jorge

2015-04-01

Rhizophora species of mangroves have a conspicuous system of stilt-like roots (rhizophores) that grow from the main stem and resemble flying buttresses. As such, the development of rhizophores can be predicted to be important for the effective transmission of dynamic loads from the top of the tree to the ground, especially where the substrate is unstable, as is often the case in the habitats where Rhizophora species typically grow. This study tests the hypothesis that rhizophore architecture in R. mangle co-varies with their proximity to the main stem, and with stem size and crown position. The allometry and wood mechanical properties of R. mangle (red mangrove) trees growing in a mangrove basin forest within a coastal lagoon in Mexico were compared with those of coexisting, non-buttressed mangrove trees of Avicennia germinans. The anatomy of rhizophores was related to mechanical stress due to crown orientation (static load) and to prevailing winds (dynamic load) at the study site. Rhizophores buttressed between 10 and 33 % of tree height. There were significant and direct scaling relationships between the number, height and length of rhizophores vs. basal area, tree height and crown area. Wood mechanical resistance was significantly higher in the buttressed R. mangle (modulus of elasticity, MOE = 18·1 ± 2 GPa) than in A. germinans (MOE = 12·1 ± 0·5 GPa). Slenderness ratios (total height/stem diameter) were higher in R. mangle, but there were no interspecies differences in critical buckling height. When in proximity to the main stem, rhizophores had a lower length/height ratio, higher eccentricity and higher xylem/bark and pith proportions. However, there were no directional trends with regard to prevailing winds or tree leaning. In comparison with A. germinans, a tree species with wide girth and flare at the base, R. mangle supports a thinner stem of higher mechanical resistance that is stabilized by rhizophores resembling flying buttresses. This provides a unique strategy to increase tree slenderness and height in the typically unstable substrate on which the trees grow, at a site that is subject to frequent storms. © The Author 2015. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Olive tree-ring problematic dating: a comparative analysis on Santorini (Greece).

PubMed

Cherubini, Paolo; Humbel, Turi; Beeckman, Hans; Gärtner, Holger; Mannes, David; Pearson, Charlotte; Schoch, Werner; Tognetti, Roberto; Lev-Yadun, Simcha

2013-01-01

Olive trees are a classic component of Mediterranean environments and some of them are known historically to be very old. In order to evaluate the possibility to use olive tree-rings for dendrochronology, we examined by various methods the reliability of olive tree-rings identification. Dendrochronological analyses of olive trees growing on the Aegean island Santorini (Greece) show that the determination of the number of tree-rings is impossible because of intra-annual wood density fluctuations, variability in tree-ring boundary structure, and restriction of its cambial activity to shifting sectors of the circumference, causing the tree-ring sequences along radii of the same cross section to differ.

Predicting internal white oak (Quercus alba) log defect features using surface defect indicator measurements

Treesearch

Ralph E. Thomas

2012-01-01

As hardwood trees grow and develop, surface defects such as limb stubs and wounds are overgrown and encapsulated into the tree. Evidence of these defects can remain on the tree's surface for decades and in many instances for the life of the tree. The location and severity of internal defects dictate the quality and value of products that can be obtained from logs...

Recent changes in the estimation of standing dead tree biomass and carbon stocks in the U.S. forest inventory

Treesearch

Grant M. Domke; Christopher W. Woodall; James E. Smith

2012-01-01

Until recently, standing dead tree biomass and carbon (C) has been estimated as a function of live tree growing stock volume in the U.S. Forest Service, Forest Inventory and Analysis (FIA) Program. Traditional estimates of standing dead tree biomass/C attributes were based on merchantability standards that did not reflect density reductions or structural loss due to...

Journeying into the Anthropocene - Scots pine and eastern hemlock over the next 400 years

Treesearch

Duncan Stone

2014-01-01

Our native trees are much loved and valued components of our forests and fields, towns and cities. For a host of reasons - conservation, landscape, shade, and their sheer visual glory, we want our trees to grow big and old. But it takes time - often several centuries - from planting a tree to the desired outcome. This means that we need to choose trees today, which can...

National Forest Health Monitoring Program Wisconsin Street Tree Assessment 2002-2003, NA-FR-02-08 Brief

Treesearch

Anne Buckelew Cumming; Daniel Twardus; Robert Hoehn; David Nowak; Manfred Mielke; Richard Rideout; Helen Butalla; Patricia Lebow

2008-01-01

Street trees grow along roadways within the public right-ofway. They are an important part of the urban forest due to their visibility to motorists and pedestrians, even if their numbers represent a small fraction of trees in urban areas. Little data are available that describe this resource at a large, statewide scale. Street trees, a subpopulation of the urban forest...

Rooting stem cuttings of northern red oak (Quercus rubra L.) utilizing hedged stump sprouts formed on recently felled trees

Treesearch

Matthew H. Gocke; Daniel J. Robinson

2010-01-01

The ability to root stem cuttings collected from hedged stump sprouts formed on recently felled trees was evaluated for 26 codominant northern red oak (Quercus rubra L.) trees growing in Durham County, NC. Sprouting occurred, the same year as felling, on 23 of the 26 tree stumps and sprout number was significantly and positively correlated with stump diameter. The...

Mountain pine beetle-caused tree mortality in partially cut plots surrounded by unmanaged stands

Treesearch

J. M. Schmid; S. A. Mata

2005-01-01

Mountain pine beetle activity was monitored in one set of 2.5 acre plots in the southern portion of the Black Hills National Forest over a 17-year period. Beetles attacked 77 percent of the trees in the uncut control, 48 percent of the trees in the growing stock level (GSL) 100/110, 53 percent of the trees in the GSL 80/90, and 9 percent of the trees in the GSL 60/70....

Increased vapor pressure deficit due to higher temperature leads to greater transpiration and faster mortality during drought for tree seedlings common to the forest-grassland ecotone.

PubMed

Will, Rodney E; Wilson, Stuart M; Zou, Chris B; Hennessey, Thomas C

2013-10-01

Tree species growing along the forest-grassland ecotone are near the moisture limit of their range. Small increases in temperature can increase vapor pressure deficit (VPD) which may increase tree water use and potentially hasten mortality during severe drought. We tested a 40% increase in VPD due to an increase in growing temperature from 30 to 33°C (constant dewpoint 21°C) on seedlings of 10 tree species common to the forest-grassland ecotone in the southern Great Plains, USA. Measurement at 33 vs 30°C during reciprocal leaf gas exchange measurements, that is, measurement of all seedlings at both growing temperatures, increased transpiration for seedlings grown at 30°C by 40% and 20% for seedlings grown at 33°C. Higher initial transpiration of seedlings in the 33°C growing temperature treatment resulted in more negative xylem water potentials and fewer days until transpiration decreased after watering was withheld. The seedlings grown at 33°C died 13% (average 2 d) sooner than seedlings grown at 30°C during terminal drought. If temperature and severity of droughts increase in the future, the forest-grassland ecotone could shift because low seedling survival rate may not sufficiently support forest regeneration and migration. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Changes in water, nitrogen and carbon cycling in loblolly pine (Pinus taeda L.) during a mortality event

NASA Astrophysics Data System (ADS)

Renninger, H. J.; Hornslein, N.; Siegert, C. M.

2017-12-01

Depending on the type of disturbance, the mortality process of an individual tree may occur over an extended period leading to changes in tree and ecosystem functioning throughout this time period and before ultimate tree death is evident. Therefore, the goals of this research were to quantify physiological changes occurring in loblolly pine (Pinus taeda L.) during an extended mortality event. In July 2015, ten trees were girdled to simulate a Southern pine beetle disturbance and trees were monitored until their eventual mortality which occurred from Aug. to Dec. of 2016. Sapflow rates and litterfall were monitored throughout the mortality process and photosynthetic rates and leaf nitrogen concentrations were measured at the height of the 2016 growing season. Girdled pines had significantly higher sapflow compared with control pines in the first month following girdling, then sapflow did not differ significantly for the remainder of the 2015 growing season. From Dec. 2015 to Dec. 2016, control trees had about 25% higher sapflow compared with girdled pines, but both groups maintained a similar relationship between sapflow and soil moisture. Extensive litterfall occurred throughout the 2016 growing season and litter had 50% higher N concentration than the prior growing season. N concentration of fresh leaves collected in 2016 did not differ in girdled vs. control pines but control pines had 64% higher maximum Rubisco-limited carboxylation rates (Vcmax) and 68% higher electron transport-limited carboxylation rates (Jmax) compared to girdled pines. Control pines also had 66% higher foliage densities and 44% larger growth ring widths than girdled pines at the end of the 2016 growing season. Taken together, these results highlight the physiological changes that occur in pines undergoing mortality before needles completely discolor and drop. Compared with control pines, girdled pines exhibited greater changes in carbon and nitrogen compared with water use suggesting that sapflow per unit leaf area was increased to compensate for the losses in total leaf area. These data highlight the importance of physiological measurements taken throughout a mortality event to more accurately quantify the changes in ecosystem-scale water, nitrogen and carbon balance occurring during disturbance episodes.

Assessment of xylem phenology: a first attempt to verify its accuracy and precision.

PubMed

Lupi, C; Rossi, S; Vieira, J; Morin, H; Deslauriers, A

2014-01-01

This manuscript aims to evaluate the precision and accuracy of current methodology for estimating xylem phenology and tracheid production in trees. Through a simple approach, sampling at two positions on the stem of co-dominant black spruce trees in two sites of the boreal forest of Quebec, we were able to quantify variability among sites, between trees and within a tree for different variables. We demonstrated that current methodology is accurate for the estimation of the onset of xylogenesis, while the accuracy for the evaluation of the ending of xylogenesis may be improved by sampling at multiple positions on the stem. The pattern of variability in different phenological variables and cell production allowed us to advance a novel hypothesis on the shift in the importance of various drivers of xylogenesis, from factors mainly varying at the level of site (e.g., climate) at the beginning of the growing season to factors varying at the level of individual trees (e.g., possibly genetic variability) at the end of the growing season.

TREAT (TREe-based Association Test)

Cancer.gov

TREAT is an R package for detecting complex joint effects in case-control studies. The test statistic is derived from a tree-structure model by recursive partitioning the data. Ultra-fast algorithm is designed to evaluate the significance of association between candidate gene and disease outcome

Effects of pruning height on the diameter growth of yellow birch

Treesearch

Dale S. Solomon; Barton M. Blum

1977-01-01

The diameter growth rate of pruned trees increased the second year after pruning, whereas the diameter growth of unpruned trees was not as fast during the second year. Diameter growth rate was positively correlated with the height to which all branches were pruned. After the pruning shock of the first year, trees pruned to 50 percent of their height showed the greatest...

Portable Language-Independent Adaptive Translation from OCR. Phase 1

DTIC Science & Technology

2009-04-01

including brute-force k-Nearest Neighbors ( kNN ), fast approximate kNN using hashed k-d trees, classification and regression trees, and locality...achieved by refinements in ground-truthing protocols. Recent algorithmic improvements to our approximate kNN classifier using hashed k-D trees allows...recent years discriminative training has been shown to outperform phonetic HMMs estimated using ML for speech recognition. Standard ML estimation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richard F. Daniels; Alexander Clark III

The forest industry will increasingly rely on fast-growing intensively managed southern pine plantations to furnish wood and fiber. Intensive silvicultural practices, including competition control, stand density control, fertilization, and genetic improvement are yielding tremendous gains in the quantity of wood production from commercial forest land. How these technologies affect wood properties was heretofore unknown, although there is concern about the suitability of fast-grown wood for traditional forest products. A four year study was undertaken to examine the effects of these intensive practices on the properties of loblolly and slash pine wood by applying a common sampling method over 10 existingmore » field experiments. Early weed control gets young pines off to a rapid start, often with dramatically increased growth rates. This response is all in juvenile wood however, which is low in density and strength. Similar results are found with early Nitrogen fertilization at the time of planting. These treatments increase the proportion of juvenile wood in the tree. Later, mid-rotation fertilization with Nitrogen and Phosphorus can have long term (4-8 year) growth gains. Slight reductions in wood density are short-lived (1-2 years) and occur while the tree is producing dense, stiff mature wood. Impacts of mid-rotation fertilization on wood properties for manufacturing are estimated to be minimal. Genetic differences are evident in wood density and other properties. Single family plantings showed somewhat more uniform properties than bulk improved or unimproved seedlots. Selection of genetic sources with optimal wood properties may counter some of the negative impacts of intensive weed control and fertilization. This work will allow forest managers to better predict the effects of their practices on the quality of their final product.« less

Interactions between CO2 enhancement and N addition on net primary productivity and water-use efficiency in a mesocosm with multiple subtropical tree species.

PubMed

Yan, Junhua; Zhang, Deqiang; Liu, Juxiu; Zhou, Guoyi

2014-07-01

Carbon dioxide (CO2 ) enhancement (eCO2 ) and N addition (aN) have been shown to increase net primary production (NPP) and to affect water-use efficiency (WUE) for many temperate ecosystems, but few studies have been made on subtropical tree species. This study compared the responses of NPP and WUE from a mesocosm composing five subtropical tree species to eCO2 (700 ppm), aN (10 g N m(-2) yr(-1) ) and eCO2 × aN using open-top chambers. Our results showed that mean annual ecosystem NPP did not changed significantly under eCO2 , increased by 56% under aN and 64% under eCO2 × aN. Ecosystem WUE increased by 14%, 55%, and 61% under eCO2 , aN and eCO2 × aN, respectively. We found that the observed responses of ecosystem WUE were largely driven by the responses of ecosystem NPP. Statistical analysis showed that there was no significant interactions between eCO2 and aN on ecosystem NPP (P = 0.731) or WUE (P = 0.442). Our results showed that increasing N deposition was likely to have much stronger effects on ecosystem NPP and WUE than increasing CO2 concentration for the subtropical forests. However, different tree species responded quite differently. aN significantly increased annual NPP of the fast-growing species (Schima superba). Nitrogen-fixing species (Ormosia pinnata) grew significantly faster only under eCO2 × aN. eCO2 had no effects on annual NPP of those two species but significantly increased annual NPP of other two species (Castanopsis hystrix and Acmena acuminatissima). Differential responses of the NPP among different tree species to eCO2 and aN will likely have significant implications on the species composition of subtropical forests under future global change. © 2013 John Wiley & Sons Ltd.

Sensitivity of tree ring growth to local and large-scale climate variability in a region of Southeastern Brazil

NASA Astrophysics Data System (ADS)

Venegas-González, Alejandro; Chagas, Matheus Peres; Anholetto Júnior, Claudio Roberto; Alvares, Clayton Alcarde; Roig, Fidel Alejandro; Tomazello Filho, Mario

2016-01-01

We explored the relationship between tree growth in two tropical species and local and large-scale climate variability in Southeastern Brazil. Tree ring width chronologies of Tectona grandis (teak) and Pinus caribaea (Caribbean pine) trees were compared with local (Water Requirement Satisfaction Index—WRSI, Standardized Precipitation Index—SPI, and Palmer Drought Severity Index—PDSI) and large-scale climate indices that analyze the equatorial pacific sea surface temperature (Trans-Niño Index-TNI and Niño-3.4-N3.4) and atmospheric circulation variations in the Southern Hemisphere (Antarctic Oscillation-AAO). Teak trees showed positive correlation with three indices in the current summer and fall. A significant correlation between WRSI index and Caribbean pine was observed in the dry season preceding tree ring formation. The influence of large-scale climate patterns was observed only for TNI and AAO, where there was a radial growth reduction in months preceding the growing season with positive values of the TNI in teak trees and radial growth increase (decrease) during December (March) to February (May) of the previous (current) growing season with positive phase of the AAO in teak (Caribbean pine) trees. The development of a new dendroclimatological study in Southeastern Brazil sheds light to local and large-scale climate influence on tree growth in recent decades, contributing in future climate change studies.

Three-dimensional feature extraction and geometric mappings for improved parameter estimation in forested terrain using airborne LiDAR data

NASA Astrophysics Data System (ADS)

Lee, Heezin

Scanning laser ranging technology is well suited for measuring point-to-point distances because of its ability to generate small beam divergences. As a result, many of the laser pulses emitted from airborne light detection and ranging (LiDAR) systems are able to reach the ground underneath tree canopies through small (10 cm scale) gaps in the foliage. Using high pulse rate lasers and fast optical scanners, airborne LiDAR systems can provide both high spatial resolution and canopy penetration, and these data have become more widely available in recent years for use in environmental and forestry applications. The small-footprint, discrete-return Airborne Laser Swath Mapping (ALSM) system at the University of Florida (UF) is used to directly measure ground surface elevations and the three-dimensional (3D) distribution of the vegetative material above the soil surface. Field of view geometric mappings are explored to find optical gaps inside forests. First, a method is developed to detect walking trails in natural forests that are obscured from above by the canopy. Several features are derived from the ALSM data and used to constrain the search space and infer the location of trails. Second, a robust and simple procedure for estimating intercepted photosynthetically active radiation (IPAR), which is an important measure of forest timber productivity and of daylight visibility in forested terrain, is presented. Simple scope functions that isolate the relevant LiDAR reflections between observer locations and the sun are defined and shown to give good agreement between the LiDAR-derived estimates and values of IPAR measured in situ. A conical scope function with an angular divergence from the centerline of +/-7° provided the best agreement with the in situ measurements. This scope function yielded remarkably consistent IPAR estimates for different pine species and growing conditions. The developed idea could be extended, through potential future work, to characterize the spatial distribution of attenuation of GPS (L-band) microwave signals and of detectability from the sky for military personnel operating in forested terrain. Measuring individual trees can provide valuable information about forests, and airborne LiDAR sensors have been recently used to identify individual trees and measure structural tree parameters. Past results, however, have been mixed because of reliance on interpolated (image) versions of the LiDAR measurements and search methods that do not adapt to variations in canopies. In this work, an adaptive clustering method is developed using 3D airborne LiDAR data acquired over two distinctly different managed pine forests in North-Central Florida, USA. A critical issue in isolating individual trees is determining the appropriate size of the moving window (search radius) when locating seed points. The proposed approach works directly on the 3D "cloud" of LiDAR points and adapts to irregular canopy sizes. The region growing step yields collectively exhaustive sets in an initial segmentation of tree canopies. An agglomerative clustering step is then used to merge clusters that represent parts of whole canopies using the locally varying height distribution. The overall tree detection accuracy achieved is 95.1% with no significant bias. The tree detection enables subsequent estimation of tree height and vertical crown length to an accuracy of better than 0.8 m and 1.5 m, respectively. Lastly, a compact representation of the different geometric characteristics of the segmented LiDAR points is introduced using spin images as a new tool that can potentially help tree detection in complex natural forests.

Metal(loid) allocation and nutrient retranslocation in Pinus halepensis trees growing on semiarid mine tailings.

PubMed

Parraga-Aguado, Isabel; Querejeta, Jose-Ignacio; González-Alcaraz, María Nazaret; Conesa, Hector M

2014-07-01

The goal of this study was to evaluate internal metal(loid) cycling and the risk of metal(loid) accumulation in litter from Pinus halepensis trees growing at a mine tailing disposal site in semiarid Southeast Spain. Internal nutrient retranslocation was also evaluated in order to gain insight into the ability of pine trees to cope with the low-fertility soil conditions at the tailings. We measured metal(loid) concentrations in the foliage (young and old needles), woody stems and fresh leaf litter of pine trees growing on tailings. The nutrient status and stable isotope composition of pine foliage (δ(13)C, δ(15)N, δ(18)O as indicators of photosynthesis and water use efficiency) were also analyzed. Tailing soil properties in vegetation patches and in adjacent bare soil patches were characterized as well. Significant amounts of metal(loid)s such us Cd, Cu, Pb and Sb were immobilized in the woody stems of Pinus halepensis trees growing on tailings. Leaf litterfall showed high concentrations of As, Cd, Sb, Pb and Zn, which thereby return to the soil. However, water extractable metal(loid) concentrations in tailing soils were similar between vegetation patches (mineral soil under the litter layer) and bare soil patches. The pines growing on mine tailings showed very low foliar P concentrations in all leaf age classes, which suggests severe P deficiency. Young (current year) needles showed lower accumulation of metal(loid)s, higher nutrient concentrations (P and K), and higher water use efficiency (as indicated by and δ(13)C and δ(18)O data) than older needles. Substantial nutrient resorption occurred before leaf litterfall, with 46% retranslocation efficiency for P and 89% for K. In conclusion, phytostabilization of semiarid mine tailings with Pinus halepensis is feasible but would require careful monitoring of the trace elements released from litterfall, in order to assess the long term risk of metal(loid) transfer to the food chain. Copyright © 2014 Elsevier B.V. All rights reserved.

Low-impact chemical weed control techniques in UNESCO World Heritage Sites of Cuba.

PubMed

Hernandez-Enriquez, O; Alvarez, R; Morelli, F; Bastida, F; Camacho, D; Menendez, J

2012-01-01

Dichrostachys cinerea is a thorny, acacia-like, fast-growing woody bush which invades fields, wasteland, road sides and other disturbed areas. This gregarious species has become a very aggressive invasive weed in Cuba, where no native predators or pathogens are found. It often encroaches in fallows, overgrazed areas and mismanaged veld. D. cinerea is a very difficult weed to eliminate because of its active suckering, and is liable to produce dense thickets which are quite impenetrable on account of the density and abundance of its long, stiff, sharp thorns. In the Valle de los Ingenios area (Cuba Central), the tree is unchecked and forms veritable forests in areas on which cane growing has been discontinued. Physical management by cutting and burning the plants is not a very efficient control method, since the seeds survive in the soil, and they grow very fast. Therefore, chemical methods via the use of herbicides are often necessary to eradicate this weed. A preliminary study using glyphosate and auxin-like herbicides (2,4-D + picloram, MCPA, and MCPA + 2,4-D) plus adjuvants has been carried out in order to elucidate the best mixtures rendering maximum weed control with minimum herbicide rate and environmental stress. None of the herbicides used except glyphosate and 2,4-D + picloram showed acceptable mortality rates (75-80%) at the recommended doses tested. In the failed herbicide treatments, only the use of double herbicide rates succeeded in controlling marabou. The herbicide mixture of 2,4-D + picloram formulated with either a non-ionic surfactant or a mixture of fatty acid esters was the best option to control D. cinerea in terms of maximum effectiveness and minimum environmental stress, as the reduction in active ingredients applied to the environment was x3 in these two adjuvant-amended formulations compared to 2,4-D + picloram alone.

Better trees through systematic breeding

Treesearch

Robert Z. Callaham

1957-01-01

Today I would like to tell you briefly about the efforts of forest geneticists to improve the quality of forest trees. What do we mean by quality? Here, the consumer has the first word. The trees we produce are primarily for timber production, and the timber growing and wood-using industries give us our guidelines. Nevertheless, many of the characteristics sought by...

Assisted migration: What it means to nursery managers and tree planters

Treesearch

Mary I. Williams; R. Kasten Dumroese

2014-01-01

Projections indicate that natural plant adaptation and migration may not keep pace with climate changes. This mismatch in rates will pose significant challenges for practitioners that select, grow, and outplant native tree species. Populations of native tree species planted today must be able to meet the climatic challenges they will face during this century. One...

Initial responses of forest understories to varying levels and patterns of green-tree retention.

Treesearch

Charles B. Halpern; Donald McKenzie; Shelley A. Evans; Douglas A. Maguire

2005-01-01

Timber harvest with "green-tree" retention has been adopted in many temperate and boreal forest ecosystems, reflecting growing appreciation for the ecological values of managed forests. On federal forest lands in the Pacific Northwest, standards and guidelines for green-tree retention have been adopted, but systematic assessments of ecosystem response have...

Five-year results of a ponderosa pine provenance study in the Black Hills

Treesearch

James L. Van Deusen

1974-01-01

Survival and height growth data were collected after five field growing seasons from ponderosa pine progeny representing 75 provenances of natural stands in the Great Plains and Northern Rockies. Results showed that trees from no other provenance survived significantly better or grew significantly taller than trees from the Black Hills. Trees from southern Colorado,...

Goal Programming: A New Tool for the Christmas Tree Industry

Treesearch

Bruce G. Hansen

1977-01-01

Goal programing (GP) can be useful for decision making in the natural Christmas tree industry. Its usefulness is demonstrated through an analysis of a hypothetical problem in which two potential growers decide how to use 10 acres in growing Christmas trees. Though the physical settings are identical, distinct differences between their goals significantly influence the...

Alabama, 2010 forest inventory and analysis factsheet

Treesearch

Andrew J. Hartsell

2011-01-01

FIA was initially established to monitor the Nation’s timber supply and the amount of commercially available resources. These early surveys were not concerned with the forests, species, and tree sizes that were not considered commercially viable. Early FIA reported only on growing-stock trees on timberlands, i.e., commercially important tree species and sizes on...

HOW to Grow and Maintain a Healthy Birch Tree

Treesearch

Steven Katovich; Robert Wawrzynski; Dennis Haugen; Barbara Spears

1997-01-01

Birch trees are prized for their outstanding bark characteristics and their graceful delicate foliage. Numerous species and cultivars are used in landscapes, and almost all are distinctive in bark coloration, growth form, and susceptibility to certain insect pests. Though homeowners often desire birch as an ornamental tree, they soon discover that birch can be very...

Stocking guidelines for the endemic Hawaiian hardwood, Acacia koa

Treesearch

P. J. Baker; P. G. Scowcroft

2005-01-01

Stocking relationships are an important tool for foresters because they provide a means for evaluating how effectively the trees in a stand use available growing space. While stocking guidelines are not available for many tropical tree species, readily obtained measurements of stem and crown diameters can be used to develop preliminary stocking guidelines for most tree...

Crop tree release options for young hardwood stands in North Carolina

Treesearch

Jamie L. Schuler; Daniel J. Robison

2006-01-01

Harvesting southern hardwood forests using even-aged reproduction methods commonly regenerate new stands with 20,000 to 50,000 stems per acre. Overstocking and an overabundance of non-commercial tree species are considered major constraints to growing productive and valuable hardwoods. Crop tree release practices have been promoted as an efficient way of thinning young...

Assessing potential urban tree planting sites in the Piedmont of the Unitied States: A comparison of methods

Treesearch

Krista Merry; Jacek Siry; Pete Bettinger; Michael Bowker

2013-01-01

There is a growing interest of late to enhance our ability to reduce carbon dioxide levels in the atmosphere through tree growth. Although the spread of development in urban areas may, in some cases, cause a reduction in forest cover, there may be opportunities to establish additional trees in open...

Comparing timber and lumber from plantation and natural stands of ponderosa pine

Treesearch

Eini C. Lowell; Christine L. Todoroki; Ed. Thomas

2009-01-01

Data derived from empirical studies, coupled with modeling and simulation techniques, were used to compare tree and product quality from two stands of small-diameter ponderosa pine trees growing in northern California: one plantation, the other natural. The plantation had no management following establishment, and the natural stand had no active management. Fifty trees...

Adequacy of Advance Tree-Seedling Regeneration in Pennsylvania's Forests

Treesearch

William H. McWilliams; Susan L. Stout; Todd W. Bowersox; Larry H. McCormick

1995-01-01

Measurement of tree seedlings and herbaceous vegetation from 499 sample locations across Pennsylvania revealed that advance tree-seedling regeneration is inadequate for new stand establishment across most of the State. The samples were located in stands from 40% to 75% stocked to focus on stands with ample light and growing space for establishment of abundant advance...

Comparison of the oxygen and hydrogen isotopes in the juices of fast-growing vegetables and slow-growing fruits.

PubMed

Bong, Yeon-Sik; Lee, Kwang-Sik; Shin, Woo-Jin; Ryu, Jong-Sik

2008-09-01

We have analyzed the oxygen and hydrogen isotopic composition of juices from fruits and vegetables collected from a small orchard in order to investigate the differences in isotopic enrichment and evaporation intensity between fast-growing vegetables and slow-growing fruits grown under the same climatic conditions. The oxygen and hydrogen isotope levels were much higher in the juices of the fruits and vegetables than in the source waters in which they grew because of evaporation effects. According to our data, fast-growing vegetables are subject to greater evaporation than slow-growing fruits. An evaporation experiment using the source water showed that the oxygen and hydrogen isotopic composition of the 60-80% residual fraction was similar to that of the isotopically enriched grape juice, whereas those of the plume and tomato juices were very close to that of the 80-90% residual fraction, thus proving the effect of evaporation. Copyright (c) 2008 John Wiley & Sons, Ltd.

Unravelling the limits to tree height: a major role for water and nutrient trade-offs.

PubMed

Cramer, Michael D

2012-05-01

Competition for light has driven forest trees to grow exceedingly tall, but the lack of a single universal limit to tree height indicates multiple interacting environmental limitations. Because soil nutrient availability is determined by both nutrient concentrations and soil water, water and nutrient availabilities may interact in determining realised nutrient availability and consequently tree height. In SW Australia, which is characterised by nutrient impoverished soils that support some of the world's tallest forests, total [P] and water availability were independently correlated with tree height (r = 0.42 and 0.39, respectively). However, interactions between water availability and each of total [P], pH and [Mg] contributed to a multiple linear regression model of tree height (r = 0.72). A boosted regression tree model showed that maximum tree height was correlated with water availability (24%), followed by soil properties including total P (11%), Mg (10%) and total N (9%), amongst others, and that there was an interaction between water availability and total [P] in determining maximum tree height. These interactions indicated a trade-off between water and P availability in determining maximum tree height in SW Australia. This is enabled by a species assemblage capable of growing tall and surviving (some) disturbances. The mechanism for this trade-off is suggested to be through water enabling mass-flow and diffusive mobility of P, particularly of relatively mobile organic P, although water interactions with microbial activity could also play a role.

Automatic Classification of Trees from Laser Scanning Point Clouds

NASA Astrophysics Data System (ADS)

Sirmacek, B.; Lindenbergh, R.

2015-08-01

Development of laser scanning technologies has promoted tree monitoring studies to a new level, as the laser scanning point clouds enable accurate 3D measurements in a fast and environmental friendly manner. In this paper, we introduce a probability matrix computation based algorithm for automatically classifying laser scanning point clouds into 'tree' and 'non-tree' classes. Our method uses the 3D coordinates of the laser scanning points as input and generates a new point cloud which holds a label for each point indicating if it belongs to the 'tree' or 'non-tree' class. To do so, a grid surface is assigned to the lowest height level of the point cloud. The grids are filled with probability values which are calculated by checking the point density above the grid. Since the tree trunk locations appear with very high values in the probability matrix, selecting the local maxima of the grid surface help to detect the tree trunks. Further points are assigned to tree trunks if they appear in the close proximity of trunks. Since heavy mathematical computations (such as point cloud organization, detailed shape 3D detection methods, graph network generation) are not required, the proposed algorithm works very fast compared to the existing methods. The tree classification results are found reliable even on point clouds of cities containing many different objects. As the most significant weakness, false detection of light poles, traffic signs and other objects close to trees cannot be prevented. Nevertheless, the experimental results on mobile and airborne laser scanning point clouds indicate the possible usage of the algorithm as an important step for tree growth observation, tree counting and similar applications. While the laser scanning point cloud is giving opportunity to classify even very small trees, accuracy of the results is reduced in the low point density areas further away than the scanning location. These advantages and disadvantages of two laser scanning point cloud sources are discussed in detail.

Geoecohydrological mechanisms couple soil and leaf water dynamics and facilitate species coexistence in shallow soils of a tropical semiarid mixed forest.

PubMed

Rodríguez-Robles, Ulises; Arredondo, J Tulio; Huber-Sannwald, Elisabeth; Vargas, Rodrigo

2015-07-01

Trees growing on shallow rocky soils must have exceptional adaptations when underlying weathered bedrock has no deep fractures for water storage. Under semiarid conditions, hydrology of shallow soils is expected to decouple from plant hydrology, as soils dry out as a result of rapid evaporation and competition for water increases between coexisting tree species. Gas exchange and plant-water relations were monitored for 15 months for Pinus cembroides and Quercus potosina tree species in a tropical semiarid forest growing on c. 20-cm-deep soils over impermeable volcanic bedrock. Soil and leaf water potential maintained a relatively constant offset throughout the year in spite of high intra-annual fluctuations reaching up to 5 MPa. Thus, hydrology of shallow soils did not decouple from hydrology of trees even in the driest period. A combination of redistribution mechanisms of water stored in weathered bedrock and hypodermic flow accessible to oak provided the source of water supply to shallow soils, where most of the actively growing roots occurred. This study demonstrates a unique geoecohydrological mechanism that maintains a tightly coupled hydrology between shallow rocky soils and trees, as well as species coexistence in this mixed forest, where oak facilitates water access to pine. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Informing tree-ring reconstructions with automated dendrometer data: the case of single-leaf pinyon (Pinus monophylla) from Great Basin National Park, Nevada, USA

NASA Astrophysics Data System (ADS)

Biondi, F.

2012-12-01

One of the most pressing issues in modern tree-ring science is to reduce uncertainty of reconstructions while emphasizing that the composition and dynamics of modern ecosystems cannot be understood from the present alone. I present here the latest results from research on the environmental factors that control radial growth of single-leaf pinyon (Pinus monophylla) in the Great Basin of North America using dendrometer data collected at half-hour intervals during two full growing season, 2010 and 2011. Automated (solar-powered) sensors at the site consisted of 8 point dendrometers installed on 7 trees to measure stem size, together with environmental probes that recorded air temperature, soil temperature and soil moisture. Additional meteorological variables at hourly timesteps were available from the EPA-CASTNET station located within 100 m of the dendrometer site. Daily cycles of stem expansion and contraction were quantified using the approach of Deslauriers et al. 2011, and the amount of daily radial stem increment was regressed against environmental variables. Graphical and numerical results showed that tree growth is relatively insensitive to surface soil moisture during the growing season. This finding corroborates empirical dendroclimatic results that showed how tree-ring chronologies of single-leaf pinyon are mostly a proxy for the balance between winter-spring precipitation supply and growing season evapotranspiration demand, thereby making it an ideal species for drought reconstructions.

A program to compute the soft Robinson-Foulds distance between phylogenetic networks.

PubMed

Lu, Bingxin; Zhang, Louxin; Leong, Hon Wai

2017-03-14

Over the past two decades, phylogenetic networks have been studied to model reticulate evolutionary events. The relationships among phylogenetic networks, phylogenetic trees and clusters serve as the basis for reconstruction and comparison of phylogenetic networks. To understand these relationships, two problems are raised: the tree containment problem, which asks whether a phylogenetic tree is displayed in a phylogenetic network, and the cluster containment problem, which asks whether a cluster is represented at a node in a phylogenetic network. Both the problems are NP-complete. A fast exponential-time algorithm for the cluster containment problem on arbitrary networks is developed and implemented in C. The resulting program is further extended into a computer program for fast computation of the Soft Robinson-Foulds distance between phylogenetic networks. Two computer programs are developed for facilitating reconstruction and validation of phylogenetic network models in evolutionary and comparative genomics. Our simulation tests indicated that they are fast enough for use in practice. Additionally, the distribution of the Soft Robinson-Foulds distance between phylogenetic networks is demonstrated to be unlikely normal by our simulation data.

Draft Genome Sequence of Acinetobacter oleivorans PF1, a Diesel-Degrading and Plant-Growth-Promoting Endophytic Strain Isolated from Poplar Trees Growing on a Diesel-Contaminated Plume.

PubMed

Gkorezis, Panagiotis; Rineau, Francois; Van Hamme, Jonathan; Franzetti, Andrea; Daghio, Matteo; Thijs, Sofie; Weyens, Nele; Vangronsveld, Jaco

2015-02-05

We report the 3.7-Mb draft genome of Acinetobacter oleivorans strain PF1, a hydrocarbonoclastic Gram-negative bacterium in the class Gammaproteobacteria, isolated from poplar trees growing on a diesel-contaminated plume at the Ford Motor Company site in Genk, Belgium. Strain PF1 is a potent plant-growth promoter, useful for diesel fuel phytoremediation applications. Copyright © 2015 Gkorezis et al.

StrainSeeker: fast identification of bacterial strains from raw sequencing reads using user-provided guide trees.

PubMed

Roosaare, Märt; Vaher, Mihkel; Kaplinski, Lauris; Möls, Märt; Andreson, Reidar; Lepamets, Maarja; Kõressaar, Triinu; Naaber, Paul; Kõljalg, Siiri; Remm, Maido

2017-01-01

Fast, accurate and high-throughput identification of bacterial isolates is in great demand. The present work was conducted to investigate the possibility of identifying isolates from unassembled next-generation sequencing reads using custom-made guide trees. A tool named StrainSeeker was developed that constructs a list of specific k -mers for each node of any given Newick-format tree and enables the identification of bacterial isolates in 1-2 min. It uses a novel algorithm, which analyses the observed and expected fractions of node-specific k -mers to test the presence of each node in the sample. This allows StrainSeeker to determine where the isolate branches off the guide tree and assign it to a clade whereas other tools assign each read to a reference genome. Using a dataset of 100 Escherichia coli isolates, we demonstrate that StrainSeeker can predict the clades of E. coli with 92% accuracy and correct tree branch assignment with 98% accuracy. Twenty-five thousand Illumina HiSeq reads are sufficient for identification of the strain. StrainSeeker is a software program that identifies bacterial isolates by assigning them to nodes or leaves of a custom-made guide tree. StrainSeeker's web interface and pre-computed guide trees are available at http://bioinfo.ut.ee/strainseeker. Source code is stored at GitHub: https://github.com/bioinfo-ut/StrainSeeker.

Chinese tallow: Invading the southeastern Coastal Plain

USGS Publications Warehouse

,

2000-01-01

Chinese tallow is an ornamental tree with colorful autumn foliage that can survive full sunlight and shade, flooding, drought, and in some cases fire. To horticulturists this kind of tree sounds like a dream, but to ecologists, land managers, and land owners this kind of tree can be a nightmare, especially when it invades an area and takes over native vegetation. Chinese tallow (Triadica sebifera), a nonnative tree from China, is currently transforming the southeastern Coastal Plain.Over the last 30 years, Chinese tallow has become a common tree in old fields and bottomland swamps of coastal Louisiana. Several studies at the U.S. Geological Survey’s National Wetlands Research Center (NWRC), Lafayette, Louisiana, are aimed at understanding the factors that contribute to Chinese tallow growth, spread, and management.When tallow invades, it eventually monopolizes an area, creating a forest without native animal or plant species. This tree exhibits classic traits of most nonnative invaders: it is attractive so people want to distribute it, it has incredible resiliency, it grows quickly and in a variety of soils, and it is resistant to pests.In the coastal prairie of Louisiana and Texas, Chinese tallow can grow up to 30 feet and shade out native sun-loving prairie species. The disappearing of prairie species is troublesome because less than 1% of original coastal prairie remains, and in Louisiana, less than 500 of the original 2.2 million acres still exist.Tallow reproduces and grows quickly and can cause large-scale ecosystem modification (fig. 1). For example, when it completely replaces native vegetation, it has a negative effect on birds by degrading the habitat. Besides shading out grasses that cattle like to eat, it can also be potentially harmful to humans and animals because of its berries (fig. 2) and plant sap that contain toxins. There is some concern its leaves may shed toxins that change the soil chemistry and make it difficult for other plants to grow.

Genetic differentiation in life history traits and thermal stress performance across a heterogeneous dune landscape in Arabidopsis lyrata.

PubMed

Wos, Guillaume; Willi, Yvonne

2018-05-26

Over very short spatial scales, the habitat of a species can differ in multiple abiotic and biotic factors. These factors may impose natural selection on several traits and can cause genetic differentiation within a population. We studied multivariate genetic differentiation in a plant species of a sand dune landscape by linking environmental variation with differences in genotypic trait values and gene expression levels to find traits and candidate genes of microgeographical adaptation. Maternal seed families of Arabidopsis lyrata were collected in Saugatuck Dunes State Park, Michigan, USA, and environmental parameters were recorded at each collection site. Offspring plants were raised in climate chambers and exposed to one of three temperature treatments: regular occurrence of frost, heat, or constant control conditions. Several traits were assessed: plant growth, time to flowering, and frost and heat resistance. The strongest trait-environment association was between a fast switch to sexual reproduction and weaker growth under frost, and growing in the open, away from trees. The second strongest association was between the trait combination of small plant size and early flowering under control conditions combined with large size under frost, and the combination of environmental conditions of growing close to trees, at low vegetation cover, on dune bottoms. Gene expression analysis by RNA-seq revealed candidate genes involved in multivariate trait differentiation. The results support the hypothesis that in natural populations, many environmental factors impose selection, and that they affect multiple traits, with the relative direction of trait change being complex. The results highlight that heterogeneity in the selection environment over small spatial scales is a main driver of the maintenance of adaptive genetic variation within populations.

Olive Tree-Ring Problematic Dating: A Comparative Analysis on Santorini (Greece)

PubMed Central

Cherubini, Paolo; Humbel, Turi; Beeckman, Hans; Gärtner, Holger; Mannes, David; Pearson, Charlotte; Schoch, Werner; Tognetti, Roberto; Lev-Yadun, Simcha

2013-01-01

Olive trees are a classic component of Mediterranean environments and some of them are known historically to be very old. In order to evaluate the possibility to use olive tree-rings for dendrochronology, we examined by various methods the reliability of olive tree-rings identification. Dendrochronological analyses of olive trees growing on the Aegean island Santorini (Greece) show that the determination of the number of tree-rings is impossible because of intra-annual wood density fluctuations, variability in tree-ring boundary structure, and restriction of its cambial activity to shifting sectors of the circumference, causing the tree-ring sequences along radii of the same cross section to differ. PMID:23382949

Landscape and plant physiological controls on water dynamics and forest productivity within a watershed

NASA Astrophysics Data System (ADS)

Hu, Jia; Jencso, Kelsey; Looker, Nathaniel; Martin, Justin; Hoylman, Zachary

2015-04-01

Across the Western U.S., declining snowpacks have resulted in increased water limitation, leading to reduced productivity in high elevation forests. While our current understanding of how forests respond to climate change is typically focused on measuring/modeling the physiological responses and climate feedbacks, our study aims to combine physiology with hydrology to examine how landscape topography modulates the sensitivity of forests to climate. In a forested watershed in Western Montana, we linked climate variability to the physical watershed characteristics and the physiological response of vegetation to examine forest transpiration and productivity rates. Across the entire watershed, we found a strong relationship between productivity and the topographic wetness index, a proxy for soil moisture storage. However, this relationship was highly dependent on the intensity of solar radiation, suggesting that at high elevations productivity was limited by temperature, while at low elevations productivity was limited by moisture. In order to identify the mechanisms responsible for this relationship, we then examined how different coniferous species respond to changing environmental and hydrologic regimes. We first examined transpiration and productivity rates at the hillslope scale at four plots, ranging in elevation and aspect across the watershed. We found trees growing in the hollows had higher transpiration and productivity rates than trees growing in the side slope, but that these differences were more pronounced at lower elevations. We then used oxygen isotope to examine water source use by different species across the watershed. We found that trees growing in the hollows used snowmelt for a longer period. This was most likely due to upslope subsidies of snowmelt water to the hollow areas. However, we found that trees growing at lower elevations used proportionally more snowmelt than trees at the higher elevations. This was most likely due to the trees at lower elevation depending on deeper, more reliable water when the upper soils dried down during midsummer. These observations suggest that landscape topography influences the availability of soil water, which influences tree transpiration and productivity rates, thereby leading to watershed patterns of productivity.

Landscape and plant physiological controls on water dynamics within a watershed

NASA Astrophysics Data System (ADS)

Hu, J.; Looker, N. T.; Martin, J. T.; Hoylman, Z. H.; Jencso, K. G.

2014-12-01

Across the Western U.S., declining snowpacks have resulted in increased water limitation, leading to reduced productivity in high elevation forests. While our current understanding of how forests respond to climate change is typically focused on measuring/modeling the physiological responses and climate feedbacks, our study aims to combine physiology with hydrology to examine how landscape topography modulates the sensitivity of forests to climate. In a forested watershed in Western Montana, we linked climate variability to the physical watershed characteristics and the physiological response of vegetation to examine forest transpiration and productivity rates. Across the entire watershed, we found a strong relationship between productivity and the topographic wetness index, a proxy for soil moisture storage. However, this relationship was highly dependent on the intensity of solar radiation, suggesting that at high elevations productivity was limited by temperature, while at low elevations productivity was limited by moisture. In order to identify the mechanisms responsible for this relationship, we then examined how different coniferous species respond to changing environmental and hydrologic regimes. We first examined transpiration and productivity rates at the hillslope scale at four plots, ranging in elevation and aspect across the watershed. We found trees growing in the hollows had higher transpiration and productivity rates than trees growing in the side slope, but that these differences were more pronounced at lower elevations. We then used oxygen isotope to examine water source use by different species across the watershed. We found that trees growing in the hollows used snowmelt for a longer period. This was most likely due to upslope subsidies of snowmelt water to the hollow areas. However, we found that trees growing at lower elevations used proportionally more snowmelt than trees at the higher elevations. This was most likely due to the trees at lower elevation depending on deeper, more reliable water when the upper soils dried down during midsummer. These observations suggest that landscape topography influences the availability of soil water, which influences tree transpiration and productivity rates, thereby leading to watershed patterns of productivity.

An implementation of a tree code on a SIMD, parallel computer

NASA Technical Reports Server (NTRS)

Olson, Kevin M.; Dorband, John E.

1994-01-01

We describe a fast tree algorithm for gravitational N-body simulation on SIMD parallel computers. The tree construction uses fast, parallel sorts. The sorted lists are recursively divided along their x, y and z coordinates. This data structure is a completely balanced tree (i.e., each particle is paired with exactly one other particle) and maintains good spatial locality. An implementation of this tree-building algorithm on a 16k processor Maspar MP-1 performs well and constitutes only a small fraction (approximately 15%) of the entire cycle of finding the accelerations. Each node in the tree is treated as a monopole. The tree search and the summation of accelerations also perform well. During the tree search, node data that is needed from another processor is simply fetched. Roughly 55% of the tree search time is spent in communications between processors. We apply the code to two problems of astrophysical interest. The first is a simulation of the close passage of two gravitationally, interacting, disk galaxies using 65,636 particles. We also simulate the formation of structure in an expanding, model universe using 1,048,576 particles. Our code attains speeds comparable to one head of a Cray Y-MP, so single instruction, multiple data (SIMD) type computers can be used for these simulations. The cost/performance ratio for SIMD machines like the Maspar MP-1 make them an extremely attractive alternative to either vector processors or large multiple instruction, multiple data (MIMD) type parallel computers. With further optimizations (e.g., more careful load balancing), speeds in excess of today's vector processing computers should be possible.

Plant and environment interactions: Growth and yield response of commercial bearing-age {open_quote}Casselman{close_quote} plum trees to various ozone partial pressures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Retzlaff, W.A.; Williams, L.E.; DeJong, T.M.

1997-05-01

Nursery stock of plum (Prunus salicina Lindel., cv. Casselman) was planted 1 Apr. 1988 in an experimental orchard at the Univ. of California Kearney Agricultural Center near Fresno, CA. Trees in this study were enclosed in open-top fumigation chambers on 1 May 1989, and exposed to three atmospheric ozone partial pressures (charcoal filtered air, ambient air, and ambient air + ozone) during the 1989 through 1992 growing seasons (typically 1 Apr. - 1 Nov.). A nonchamber treatment plot was used to assess chamber effects on tree performance. This study details the results of the exposures during the initial commercial bearingmore » period (1991 through 1993) in this orchard. The mean 12-h (0800-2000 h Pacific Daylight Time [PDT]) ozone partial pressures during the experimental periods in the charcoal filtered, ambient, ambient + ozone, and nonchamber treatments averaged 0.031, 0.048, 0.091, and 0.056 {mu}Pa Pa{sup {minus}1} in 1991 and 1992, respectively. Fruit number per tree decreased as atmospheric ozone partial pressure increased from the charcoal filtered to ambient + ozone treatment, significantly affecting yield. Yield of plum trees averaged 23.6, 19.8, 13.7, and 17.9 kg tree{sup {minus}1} in 1991 and 1992 in the charcoal filtered, ambient, ambient + ozone, and nonchamber treatments, respectively. Only one out of the five original treatment plots was exposed to ozone treatments during the 1993 growing season. Yield of plum trees in this single replicate in 1993 was reduced by increased atmospheric ozone partial pressure. Yield of plum trees in the four remaining unexposed treatment plots in 1993 was 16.7, 17.9, and 16.0 kg tree{sup {minus}1} in the previous charcoal filtered, ambient, and ambient + ozone treatments respectively. The similarity in yield of the post-chamber treatments indicates that a change in air quality in the current growing season can affect yield of Casselman plum trees. 26 refs., 6 figs., 4 tabs.« less

Potential and limitations of using digital repeat photography to track structural and physiological phenology in Mediterranean tree-grass ecosystems

NASA Astrophysics Data System (ADS)

Luo, Yunpeng; EI-Madany, Tarek; Filippa, Gianluca; Carrara, Arnaud; Cremonese, Edoardo; Galvagno, Marta; Hammer, Tiana; Pérez-Priego, Oscar; Reichstein, Markus; Martín Isabel, Pilar; González Cascón, Rosario; Migliavacca, Mirco

2017-04-01

Tree-Grass ecosystems are global widely distributed (16-35% of the land surface). However, its phenology (especially in water-limited areas) has not yet been well characterized and modeled. By using commercial digital cameras, continuous and relatively vast phenology data becomes available, which provides a good opportunity to monitor and develop a robust method used to extract the important phenological events (phenophases). Here we aimed to assess the usability of digital repeat photography for three Tree-Grass Mediterranean ecosystems over two different growing seasons (Majadas del Tietar, Spain) to extract critical phenophases for grass and evergreen broadleaved trees (autumn regreening of grass- Start of growing season; resprouting of tree leaves; senescence of grass - End of growing season), assess their uncertainty, and to correlate them with physiological phenology (i.e. phenology of ecosystem scale fluxes such as Gross Primary Productivity, GPP). We extracted green chromatic coordinates (GCC) and camera based normalized difference vegetation index (Camera-NDVI) from an infrared enabled digital camera using the "Phenopix" R package. Then we developed a novel method to retrieve important phenophases from GCC and Camera-NDVI from various region of interests (ROIs) of the imagery (tree areas, grass, and both - ecosystem) as well as from GPP, which was derived from Eddy Covariance tower in the same experimental site. The results show that, at ecosystem level, phenophases derived from GCC and Camera-NDVI are strongly correlated (R2 = 0.979). Remarkably, we observed that at the end of growing season phenophases derived from GCC were systematically advanced (ca. 8 days) than phenophase from Camera-NDVI. By using the radiative transfer model Soil Canopy Observation Photochemistry and Energy (SCOPE) we demonstrated that this delay is related to the different sensitivity of GCC and NDVI to the fraction of green/dry grass in the canopy, resulting in a systematic higher NDVI during the dry-down of the canopy. Phenophases derived from GCC and Camera-NDVI are correlated with phenophase extracted from GPP across sites and years (R2 =0.966 and 0.976 respectively). For the start of growing season the determination coefficient was higher (R2 =0.89 and 0.98 for GCC vs GPP and Camera-NDVI vs GPP, respectively) than for the end of growing season (R2 =0.75 and 0.70, for GCC and Camera-NDVI, respectively). The statistics obtained using phenophases derived from grass or ecosystem ROI are similar. In contrast, GCC and Camera-NDVI derived from trees ROI are relatively constant and not related to the seasonality of GPP. However, the GCC of tree shows a characteristic peak that is synchronous to leaf flushing in spring assessed using regular Chlorophyll content measurements and automatic dendrometers. Concluding, we first developed a method to derive phenological events of Tree-Grass ecosystems using digital repeat photography, second we demonstrated that the phenology of GPP is strongly dominated by the phenology of grassland layer, third we discussed the uncertainty related to the use of GCC and Camera-NDVI in senescence, and finally we demonstrate the capability of GCC to track in evergreen broadleaved forest crucial phenological events. Our findings confirm digital repeat photography is a vital data source for characterizing phenology in Mediterranean Tree-Grass Ecosystem.

Effects of Changes in Food Supply at the Time of Sex Differentiation on the Gonadal Transcriptome of Juvenile Fish. Implications for Natural and Farmed Populations

PubMed Central

Díaz, Noelia; Ribas, Laia; Piferrer, Francesc

2014-01-01

Background Food supply is a major factor influencing growth rates in animals. This has important implications for both natural and farmed fish populations, since food restriction may difficult reproduction. However, a study on the effects of food supply on the development of juvenile gonads has never been transcriptionally described in fish. Methods and Findings This study investigated the consequences of growth on gonadal transcriptome of European sea bass in: 1) 4-month-old sexually undifferentiated fish, comparing the gonads of fish with the highest vs. the lowest growth, to explore a possible link between transcriptome and future sex, and 2) testis from 11-month-old juveniles where growth had been manipulated through changes in food supply. The four groups used were: i) sustained fast growth, ii) sustained slow growth, iii) accelerated growth, iv) decelerated growth. The transcriptome of undifferentiated gonads was not drastically affected by initial natural differences in growth. Further, changes in the expression of genes associated with protein turnover were seen, favoring catabolism in slow-growing fish and anabolism in fast-growing fish. Moreover, while fast-growing fish took energy from glucose, as deduced from the pathways affected and the analysis of protein-protein interactions examined, in slow-growing fish lipid metabolism and gluconeogenesis was favored. Interestingly, the highest transcriptomic differences were found when forcing initially fast-growing fish to decelerate their growth, while accelerating growth of initially slow-growing fish resulted in full transcriptomic convergence with sustained fast-growing fish. Conclusions Food availability during sex differentiation shapes the juvenile testis transcriptome, as evidenced by adaptations to different energy balances. Remarkably, this occurs in absence of major histological changes in the testis. Thus, fish are able to recover transcriptionally their testes if they are provided with enough food supply during sex differentiation; however, an initial fast growth does not represent any advantage in terms of transcriptional fitness if later food becomes scarce. PMID:25340342

Effects of changes in food supply at the time of sex differentiation on the gonadal transcriptome of juvenile fish. Implications for natural and farmed populations.

PubMed

Díaz, Noelia; Ribas, Laia; Piferrer, Francesc

2014-01-01

Food supply is a major factor influencing growth rates in animals. This has important implications for both natural and farmed fish populations, since food restriction may difficult reproduction. However, a study on the effects of food supply on the development of juvenile gonads has never been transcriptionally described in fish. This study investigated the consequences of growth on gonadal transcriptome of European sea bass in: 1) 4-month-old sexually undifferentiated fish, comparing the gonads of fish with the highest vs. the lowest growth, to explore a possible link between transcriptome and future sex, and 2) testis from 11-month-old juveniles where growth had been manipulated through changes in food supply. The four groups used were: i) sustained fast growth, ii) sustained slow growth, iii) accelerated growth, iv) decelerated growth. The transcriptome of undifferentiated gonads was not drastically affected by initial natural differences in growth. Further, changes in the expression of genes associated with protein turnover were seen, favoring catabolism in slow-growing fish and anabolism in fast-growing fish. Moreover, while fast-growing fish took energy from glucose, as deduced from the pathways affected and the analysis of protein-protein interactions examined, in slow-growing fish lipid metabolism and gluconeogenesis was favored. Interestingly, the highest transcriptomic differences were found when forcing initially fast-growing fish to decelerate their growth, while accelerating growth of initially slow-growing fish resulted in full transcriptomic convergence with sustained fast-growing fish. Food availability during sex differentiation shapes the juvenile testis transcriptome, as evidenced by adaptations to different energy balances. Remarkably, this occurs in absence of major histological changes in the testis. Thus, fish are able to recover transcriptionally their testes if they are provided with enough food supply during sex differentiation; however, an initial fast growth does not represent any advantage in terms of transcriptional fitness if later food becomes scarce.

Riparian vegetation recovery patterns following stream channelization: a geomorphic perspective

USGS Publications Warehouse

Hupp, C.R.

1992-01-01

Hundreds of kilometres of West Tennessee streams have been channelized since the turn of the century. After a stream is straightened, dredged, or cleared, basin-wide ecologic, hydrologic, and geomorphic processes bring about an integrated, characteristic recovery sequence. The rapid pace of channel responses to channelization provides an opportunity to document and interpret vegetation recovery patterns relative to otherwise long-term, concomitant evolution of river geomorphology. The linkage of channel bed aggradation, woody vegetation establishment, and bank accretion all lead to recovery of the channel. Pioneer species are hardy and fast growing, and can tolerate moderate amounts of slope instability and sediment deposition; these species include river birch (Betula nigra), black willow (Salix nigra), boxelder (Acer negundo), and silver maple (Acer saccharinum). High stem densities and root-mass development appear to enhance bank stability. Tree-ring analyses suggest that on average 65 yr may be required for recovery after channelization. -from Author

Polychlorinated biphenyls in tree bark near a former manufacturing plant in Anniston, Alabama.

PubMed

Hermanson, Mark H; Johnson, Glenn W

2007-05-01

Tree bark samples were collected to identify the relative amounts and congener profiles of atmospheric polychlorinated biphenyls dissolved into bark lipids from the gas phase in Anniston, Alabama, USA, where PCBs were manufactured from the 1920s until 1971. The area is heavily contaminated with PCBs: At least 4550 metric tons (mt) of PCB and 14000 mt of PCB distillation residue, known as Montar, remain buried in two landfills near the plant site. A minimum of 20.5 mt of PCBs were emitted to the atmosphere by the plant between 1953 and 1971 based on emissions figures for 1970. Bark results show that total PCB concentrations range over more than three orders of magnitude from 171927 ng/g lipid near the plant/landfill area, dropping exponentially to 35 ng/g lipid at a distance of about 7 km. The exponential trend is highly correlated (r=-0.77) and significant (p<0.05). The most concentrated tree started growing after 1971 showing that atmospheric PCB concentrations remained high after PCB production ended. All PCB congener profiles show persistent congeners 31+28, 52, 66, 153, 138, and 180. Congener profiles from trees growing near the plant/landfill all have somewhat similar profiles but those growing during PCB production show high molecular mass compounds not usually found in the atmosphere and not found in younger trees, even in the most concentrated sample. We believe that high-temperature Montar disposal released high molecular mass PCBs into the gas phase which were dissolved into older tree bark lipids.

Intra-annual variability of anatomical structure and δ13C values within tree rings of spruce and pine in alpine, temperate and boreal Europe

PubMed Central

Vaganov, Eugene A.; Skomarkova, Marina V.; Knohl, Alexander; Brand, Willi A.; Roscher, Christiane

2009-01-01

Tree-ring width, wood density, anatomical structure and 13C/12C ratios expressed as δ13C-values of whole wood of Picea abies were investigated for trees growing in closed canopy forest stands. Samples were collected from the alpine Renon site in North Italy, the lowland Hainich site in Central Germany and the boreal Flakaliden site in North Sweden. In addition, Pinus cembra was studied at the alpine site and Pinus sylvestris at the boreal site. The density profiles of tree rings were measured using the DENDRO-2003 densitometer, δ13C was measured using high-resolution laser-ablation-combustion-gas chromatography-infra-red mass spectrometry and anatomical characteristics of tree rings (tracheid diameter, cell-wall thickness, cell-wall area and cell-lumen area) were measured using an image analyzer. Based on long-term statistics, climatic variables, such as temperature, precipitation, solar radiation and vapor pressure deficit, explained <20% of the variation in tree-ring width and wood density over consecutive years, while 29–58% of the variation in tree-ring width were explained by autocorrelation between tree rings. An intensive study of tree rings between 1999 and 2003 revealed that tree ring width and δ13C-values of whole wood were significantly correlated with length of the growing season, net radiation and vapor pressure deficit. The δ13C-values were not correlated with precipitation or temperature. A highly significant correlation was also found between δ13C of the early wood of one year and the late wood of the previous year, indicating a carry-over effect of the growing conditions of the previous season on current wood production. This latter effect may explain the high autocorrelation of long-term tree-ring statistics. The pattern, however, was complex, showing stepwise decreases as well as stepwise increases in the δ13C between late wood and early wood. The results are interpreted in the context of the biochemistry of wood formation and its linkage to storage products. It is clear that the relations between δ13C and tree-ring width and climate are multi-factorial in seasonal climates. PMID:19653008

Triplet supertree heuristics for the tree of life

PubMed Central

Lin, Harris T; Burleigh, J Gordon; Eulenstein, Oliver

2009-01-01

Background There is much interest in developing fast and accurate supertree methods to infer the tree of life. Supertree methods combine smaller input trees with overlapping sets of taxa to make a comprehensive phylogenetic tree that contains all of the taxa in the input trees. The intrinsically hard triplet supertree problem takes a collection of input species trees and seeks a species tree (supertree) that maximizes the number of triplet subtrees that it shares with the input trees. However, the utility of this supertree problem has been limited by a lack of efficient and effective heuristics. Results We introduce fast hill-climbing heuristics for the triplet supertree problem that perform a step-wise search of the tree space, where each step is guided by an exact solution to an instance of a local search problem. To realize time efficient heuristics we designed the first nontrivial algorithms for two standard search problems, which greatly improve on the time complexity to the best known (naïve) solutions by a factor of n and n2 (the number of taxa in the supertree). These algorithms enable large-scale supertree analyses based on the triplet supertree problem that were previously not possible. We implemented hill-climbing heuristics that are based on our new algorithms, and in analyses of two published supertree data sets, we demonstrate that our new heuristics outperform other standard supertree methods in maximizing the number of triplets shared with the input trees. Conclusion With our new heuristics, the triplet supertree problem is now computationally more tractable for large-scale supertree analyses, and it provides a potentially more accurate alternative to existing supertree methods. PMID:19208181

Spot Anthracnose Disease Caused by Colletotrichum gloeosporioides on Tulip Tree in Korea.

PubMed

Choi, Okryun; Choi, Okhee; Kwak, Youn-Sig; Kim, Jinwoo; Kwon, Jin-Hyeuk

2012-03-01

The tulip tree (Liriodendron chinense) has been widely cultivated in Korea as a street or garden tree for its large flowers, which have a superficial resemblance to tulips. Occurrence of anthracnose disease on the leaves of tulip trees growing on the campus of Gyeongsang National University, Jinju, Korea, has been observed. Based on mycological characteristics, pathogenicity, and internal transcribed spacer sequence, the causal fungus was identified as Colletotrichum gloeosporioides. This is the first report on anthracnose disease caused by C. gloeosporioides on tulip trees in Korea.

Effects of low thinning in Atlantic white-cedar stands

Treesearch

G. T. Bamford; S. Little

1960-01-01

Atlantic white-cedar typically grows in dense stands. In southern New Jersey, young stands commonly contain several thousand trees per acre, and at ages around 60 years there still may be 1,000 or more trees per acre.

Individual Tree Crown Delineation Using Multi-Wavelength Titan LIDAR Data

NASA Astrophysics Data System (ADS)

Naveed, F.; Hu, B.

2017-10-01

The inability to detect the Emerald Ash Borer (EAB) at an early stage has led to the enumerable loss of different species of ash trees. Due to the increasing risk being posed by the EAB, a robust and accurate method is needed for identifying Individual Tree Crowns (ITCs) that are at a risk of being infected or are already diseased. This paper attempts to outline an ITC delineation method that employs airborne multi-spectral Light Detection and Ranging (LiDAR) to accurately delineate tree crowns. The raw LiDAR data were initially pre-processed to generate the Digital Surface Models (DSM) and Digital Elevation Models (DEM) using an iterative progressive TIN (Triangulated Irregular Network) densification method. The DSM and DEM were consequently used for Canopy Height Model (CHM) generation, from which the structural information pertaining to the size and shape of the tree crowns was obtained. The structural information along with the spectral information was used to segment ITCs using a region growing algorithm. The availability of the multi-spectral LiDAR data allows for delineation of crowns that have otherwise homogenous structural characteristics and hence cannot be isolated from the CHM alone. This study exploits the spectral data to derive initial approximations of individual tree tops and consequently grow those regions based on the spectral constraints of the individual trees.

Accounting for density reduction and structural loss in standing dead trees: Implications for forest biomass and carbon stock estimates in the United States

Treesearch

Grant M. Domke; Christopher W. Woodall; James E. Smith

2011-01-01

Standing dead trees are one component of forest ecosystem dead wood carbon (C) pools, whose national stock is estimated by the U.S. as required by the United Nations Framework Convention on Climate Change. Historically, standing dead tree C has been estimated as a function of live tree growing stock volume in the U.S.'s National Greenhouse Gas Inventory. Initiated...

Transpiration and water use efficiency in native chilean and exotic species, a usefull tool for catchment management?

NASA Astrophysics Data System (ADS)

Hervé-Fernández, P.; Oyarzun, C. E.

2012-04-01

Land-use and forest cover change play important roles in socio-economic processes and have been linked with water supply and other ecosystem services in various regions of the world. Water yield from watersheds is a major ecosystem service for human activities but has been altered by landscape management superimposed on climatic variability and change. Sustaining ecosystem services important to humans, while providing a dependable water supply for agriculture and urban needs is a major challenge faced by managers of human-dominated or increased antropical effect over watersheds. Since water is mostly consumed by vegetation (i.e: transpiration), which strongly depends on trees physiological characteristics (i.e: foliar area, transpiration capacity) are very important. The quantity of water consumed by plantations is influenced mainly by forest characteristics (species physiology, age and management), catchment water retention capacity and meteorological characteristics. Eventhough in Chile, the forest sector accounts for 3.6% of the gross domestic product (GDP) and 12.5% of total exports (INFOR, 2003), afforestation with fast growing exotic species has ended up being socially and politically questionable because of the supposed impact on the environment and water resources. We present data of trees transpiration and water use efficiency from three headwater catchments: (a) second growth native evergreen forest (Aetoxicon punctatum, Drimys winterii, Gevuina avellana, Laureliopsis philippiana); (b) Eucalyptus globulus plantation, and (c) a mixed native deciduous (Nothofagus obliqua and some evergreen species) forest and Eucalyptus globulus and Acacia melanoxylon plantation located at the Coastal Mountain Range in southern Chile (40°S). Annual transpiration rates ranged from 1.24 ± 0.41 mol•m-2•s-1 (0.022 ± 0.009 L•m-2•s-1) for E. globulus, while the lowest observed was for L. philippiana 0.44 ± 0.31 mol•m-2•s-1 (0.008 ± 0.006 L•m-2•s-1). However water use efficiency for E. globulus, was the lowest observed (6.78 ± 8.92 μmol•mol-1) compared to native species, 7.45 ± 4.41 μmol•mol-1 for A. punctatum which showed the lowest value (p < 0.05). Preliminary results show, that the E. globulus has the highest transpiration rate, but the lowest water use efficiency values, compared to native evergreen and deciduous species. Nevertheless E. globulus showed the highest photosyntethic rate values, which finally traduces that E. globulus is a fast growing, big water drinker but it's less efficient than most native trees used in this experiment. Acknowledges This research has been supported by FONDECYT 1090345. Mr. Hervé-Fernández wishes to thank BECAS CHILE for his scholarship.

Spatial patterns of a tropical tree species growing under an eucalyptus plantation in South-East Brazil.

PubMed

Higuchi, P; Silva, A C; Louzada, J N C; Machado, E L M

2010-05-01

The objectives of this study were to evaluate the influence of propagules source and the implication of tree size class on the spatial pattern of Xylopia brasiliensis Spreng. individuals growing under the canopy of an experimental plantation of eucalyptus. To this end, all individuals of Xylopia brasiliensis with diameter at soil height (dsh) > 1 cm were mapped in the understory of a 3.16 ha Eucalyptus spp. and Corymbia spp. plantation, located in the municipality of Lavras, SE Brazil. The largest nearby mature tree of X. brasiliensis was considered as the propagules source. Linear regressions were used to assess the influence of the distance of propagules source on the population parameters (density, basal area and height). The spatial pattern of trees was assessed through the Ripley K function. The overall pattern showed that the propagules source distance had strong influence over spatial distribution of trees, mainly the small ones, indicating that the closer the distance from the propagules source, the higher the tree density and the lower the mean tree height. The population showed different spatial distribution patterns according to the spatial scale and diameter class considered. While small trees tended to be aggregated up to around 80 m, the largest individuals were randomly distributed in the area. A plausible explanation for observed patterns might be limited seed rain and intra-population competition.

Trees grow on money: Urban tree canopy cover and environmental justice

Treesearch

Kirsten Schwarz; Michail Fragkias; Christopher G. Boone; Weiqi Zhou; Melissa McHale; J. Morgan Grove; Jarlath O' Neil-Dunne; Joseph P. McFadden; Geoffrey L. Buckley; Dan Childers; Laura Ogden; Stephanie Pincetl; Diane Pataki; Ali Whitmer; Mary L. Cadenasso; Steven Arthur Loiselle

2015-01-01

This study examines the distributional equity of urban tree canopy (UTC) cover for Baltimore, MD, Los Angeles, CA, New York, NY, Philadelphia, PA, Raleigh, NC, Sacramento, CA, and Washington, D.C. using high spatial resolution land cover data and census data. Data are analyzed at the Census Block Group levels using Spearman’s correlation, ordinary least squares...

Spathodea campanulata P. Beauv.

Treesearch

K.F. Connor; J.K. Francis

2002-01-01

S. campanulata is a medium-sized tree that commonly reaches a height of 21 m; however, in some parts of West Africa, it may reach 30 m. Heart and butt rots are common in trees older than 20 to 25 years that have suffered mechanical or fire damage. In Hawaii, large trees form narrow butresses at the base. It grows naturally in the secondary forests...

Aboveground tree biomass statistics for Maine: 1982

Treesearch

Eric H. Wharton; Thomas S. Frieswyk; Anne M. Malley

1985-01-01

Traditional measures of volume inadequately describe the total aboveground wood resource. The 1980-82 inventory of Maine included estimates of aboveground tree biomass on timberland. There are nearly 1,504.4 million green tons of wood and bark in all trees above the ground level, or 88.2 green tons per acre of timberland. Most of the biomass is in growing stock, but 49...

Site Productivity and Tree Mortality on New Frontiers of Gypsy Moth Infestation

Treesearch

David A. Gansner; David A. Gansner

1987-01-01

Recent analysis of forest stand losses to gypsy moth has provided basic information for analyzing the relationship between forest site productivity and tree mortality on new frontiers of infestation. Poor timber-growing sites had the lowest rates of mortality. Oak mortality (number of trees) amounted to 18 percent on poor sites compared with 26 percent on medium and 28...

Adjustments of individual-tree survival and diameter-growth equations to match whole-stand attributes

Treesearch

Quang V. Cao

2010-01-01

Individual-tree models are flexible and can perform well in predicting tree survival and diameter growth for a certain growing period. However, the resulting stand-level outputs often suffer from accumulation of errors and subsequently cannot compete with predictions from whole-stand models, especially when the projection period lengthens. Evaluated in this study were...

Limber pine conservation in Rocky Mountain National Park

Treesearch

Jeff Connor; Anna Schoettle; Kelly Burns; Erin Borgman

2012-01-01

Limber pines are one of the most picturesque trees in Rocky Mountain National Park (RMNP). Growing in some of the park's most exposed rocky sites, the trees' gnarled trunks give testimony to fierce winds that buffet them in winter. Limber pines live to great ages, with some in the park exceeding 1,000 years. An especially photogenic stand of ancient trees...

New Tree-Classification System Used by the Southern Forest Inventory and Analysis Unit

Treesearch

Dennis M. May; John S. Vissage; D. Vince Few

1990-01-01

Trees at USDA Forest Service, Southern Forest Inventory and Analysis, sample locations are classified as growing stock or cull based on their ability to produce sawlogs. The old and new classification systems are compared, and the impacts of the new system on the reporting of tree volumes are illustrated with inventory data from north Alabama.

Response of individual Douglas-fir trees to release.

Treesearch

Donald L. Reukema

1961-01-01

To evaluate effects of different degrees of release on individual Douglas-fir trees, a study was started in 1952 in a 41-year-old, site IV stand at the Wind River Experimental Forest. A remeasurement at the end of four growing seasons showed that dominants respond more quickly and positively to the removal of competing trees than codominants or intermediates. A second...

Effect of crown growing space and age on the growth of northern red oak

Treesearch

Gary W. Miller

1997-01-01

Cultural practices can be applied in even-age stands to reallocate site resources to selected crop trees. Precornrnercial thinning in sapling stands can increase diameter growth and improve species composition of trees in the main canopy. Commercial thinning in sawtimber stands also increases diameter growth of crop trees, improves residual stand quality, and removes...

Variability in urban soils influences the health and growth of native tree seedlings

Treesearch

Clara C. Pregitzer; Nancy F. Sonti; Richard A. Hallett

2016-01-01

Reforesting degraded urban landscapes is important due to the many benefits urban forests provide. Urban soils are highly variable, yet little is known about how this variability in urban soils influences tree seedling performance and survival. We conducted a greenhouse study to assess health, growth, and survival of four native tree species growing in native glacial...

An assessment of canopy stratification and tree species diversity following clearcutting in Central Appalachian hardwoods

Treesearch

Mark Benjamin Brashears; Mary Ann Fajvan; Thomas M. Schuler

2004-01-01

On high quality growing sites in West Virginia, shade intolerant tree species have increased in importance in third-generation forests following clearcutting. We investigated the effect of tree species canopy position on the Shannon-Weiner Diversity Index (H'), Pielou's evenness index (0, and species richness (S) using a chronosequence of 13 clearcuts. Two to...

Oak wilt

Treesearch

Robert, Jr. Lewis

1989-01-01

Oak wilt, a major disease of oak trees in North America, is caused by a fungus. It infects the sapwood and stops sap flow to the branches, twigs, and leaves. When sap flow is restricted during the growing season, trees wilt and soon die. In addition to killing trees, oak wilt makes it more difficult to export oak logs to other countries. Logs must be free of oak wilt...

Forest nursery seedling production in the United States—fiscal year 2012

Treesearch

Richard Harper; George Hernandez; Justin Arseneault; Michelle Bryntesen; Scott Enebak; Ronald Overton

2013-01-01

The U.S. Department of Agriculture (USDA), Forest Service, State and Private Forestry (S&PF) began reporting tree planting in the United States in 1952 in an annual report, Tree Planting in the United States. In 2000, the report was discontinued amid growing concern over the manner in which much of the tree planting data were collected.

Development and validation of the first SSR markers for Mimosa scabrella Benth.

PubMed

Saiki, F A; Bernardi, A P; Reis, M S; Faoro, H; Souza, E M; Pedrosa, F O; Mantovani, A; Guidolin, A F

2017-02-16

Mimosa scabrella Benth., popularly known as ''bracatinga'', is a pioneer and endemic species of Brazil, occurring in Mixed Ombrophilous Forest associated with Brazilian Atlantic Rainforest biomes. It is a fast-growing tree of the Fabaceae family that facilitates the dynamics of ecological succession. SSR development, when there is no genome sequence, is time and labor intensive and there are no molecular markers for M. scabrella. We developed and validated the first microsatellite markers for this tetraploid species, evaluating mother trees and progenies. Using Illumina sequencing, we identified 290 SSR loci and 211 primer pairs. After 31 SSR loci PCR/agarose electrophoresis selection, a subset of 11 primer pairs was synthetized with fluorescence in the forward primer for PCR and capillary electrophoresis validation with leaf DNA of 33 adult and 411 progeny individuals. Polymorphic locus percentage was 36, 4 in 11 loci, 3 chloroplast SSRs, and 1 nuclear SSR. Allele number of polymorphic loci ranged from 2 to 11 alleles considering all sampling. All 11 primer pairs were also tested for cross-species amplification for five Fabaceae-Mimosoideae species, ranging from 2 loci transferred to Calliandra tweedii Benth. and all 11 loci transferred to Mimosa taimbensis Burkart. The assessed and validated SSR markers for M. scabrella are suitable and useful for analysis and population genetic studies.

Integrated Vegetation Management Fact Sheet

EPA Pesticide Factsheets

IVM is generally defined as the practice of promoting desirable, stable, low-growing plant communities that will resist invasion by tall growing tree species through the use of appropriate, environmentally-sound, and cost-effective control methods.

Temporal variations of mobile carbohydrates in Abies fargesii at the upper tree limits.

PubMed

Dang, H S; Zhang, K R; Zhang, Q F; Xu, Y M

2015-01-01

Low temperatures are associated high-altitude treelines, but the functional mechanism of treeline formation remains controversial. The relative contributions of carbon limitation (source activity) and growth limitation (sink activity) require more tests across taxa and regions. We examined temporal variations of mobile carbon supply in different tissues of Abies fargesii across treeline ecotones on north- and south-facing slopes of the Qinling Mountains, China. Non-structural carbohydrate (NSC) concentrations in tissues along the altitudinal gradient on both slopes changed significantly in the early and late growing season, but not in the mid-growing season, indicating the season-dependent carbon supply status. Late in the growing season on both slopes, trees at the upper limits had the highest NSC concentrations and total soluble sugars and lowest starch concentrations compared to trees at the lower elevations. NSC concentrations tended to increase in needles and branches throughout the growing season with increasing elevation on both slopes, but declined in roots and stems. NSC concentrations across sampling dates also indicated increases in needles and branches, and decreases in roots and stem with increasing elevation. Overall altitudinal trends of NSC in A. fargesii revealed no depletion of mobile carbon reserves at upper elevation limits, suggesting limitation of sink activity dominates tree life across treeline ecotones in both north- and south-facing slopes. Carbon reserves in storage tissues (especially roots) in the late growing season might also play an important role in winter survival and early growth in spring at upper elevations on both slopes, which define the uppermost limit of A. fargesii. © 2014 German Botanical Society and The Royal Botanical Society of the Netherlands.

Non-unique key B-Tree implementation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ries, D.R.

1980-12-23

The B-Trees are an indexed method to allow fast retrieval and order preserving updates to a FRAMIS relation based on a designated set of keys in the relation. A B-Tree access method is being implemented to provide indexed and sequential (in index order) access to FRAMIS relations. The implementation modifies the basic B-Tree structure to correctly allow multiple key values and still maintain the balanced page fill property of B-Trees. The data structures of the B-Tree are presented first, including the FRAMIS solution to the duplicate key value problem. Then the access level routines and utilities are presented. These routinesmore » include the original B-Tree creation; searching the B-Tree; and inserting, deleting, and replacing tuples on the B-Tree. In conclusion, the uses of the B-Tree access structures at the semantic level to enhance the FRAMIS performance are discussed. 10 figures.« less

Theoretical and empirical evidence for the relationship between stem diameter variations and the water status of mature temperate trees

NASA Astrophysics Data System (ADS)

Dietrich, Lars; Zweifel, Roman; Kahmen, Ansgar

2017-04-01

Assessing a trees' water status is essential to evaluate its water status during drought. In particular for mature trees it is extremely difficult to monitor the water status throughout the growing season because of the difficulty of canopy access. Daily variations of stem diameter (SDV) are discussed to provide a powerful alternative in measuring a trees' water status. SDV have been shown to incorporate both radial growth and the diurnal shrinkage and swelling of bark tissue, which is caused by daytime transpiration and nighttime refilling, respectively. During dry periods, bark tissue that is depleted in water cannot entirely refill at night resulting in a progressive overall shrinkage of the tree's stem diameter often called tree water deficit (TWD). Comprehensive comparisons of SDV-based values for TWD and reliable values of stem water potential are yet missing for mature trees. As such, TWD has not yet been fully established as a simple and continuous proxy for a trees' water status. Using a canopy crane situated in Northern Switzerland, we calculated TWD based on SDV for six Central European forest tree species during one moist (2014) and one exceptionally dry (2015) growing season and compared these values to the trees' branch water potential. We found a tight relationship between branch water potential and TWD in all six species. We further employed four different mathematical approaches to calculate TWD and tested what approach yielded the best relationship with water potential. Most approaches resulted in significant relationships (p < 0.001) for the different species. However, one TWD variable showed the highest explanatory power (R2) across the six species and both years (up to 86 % explained variation). Intriguingly, this variable does not account for radial growth during periods of shrinkage in its calculation indicating that plastic growth is impeded in such times. The relationship between TWD and stem water potential can best be explained by logistic functions. We propose that, based on such a function, TWD can be employed to estimate stem water potential of trees for an entire growing season. We conclude from our data that TWD is tightly correlated to the stem water potential of mature tree species and can, thus, be used to describe continuous seasonal variations in a tree's water status. Because of its relatively easy application and deployment, there is high potential for this method to play a major role in future investigations of tree water relations.

Drought stress, growth, and nonstructural carbohydrate dynamics of pine trees in a semi-arid forest

NASA Astrophysics Data System (ADS)

Klein, Tamir; Yakir, Dan; Hoch, Günter

2014-05-01

• In trees under prolonged drought, both carbon uptake (C source) and growth (C sink) typically decrease. This correlation raises two important questions: (1) to what degree is tree growth limited by C availability; and (2) Is growth limited by concurrent C storage (e.g. as nonstructural carbohydrates, NSC). • To test the relationships between drought, growth, and C reserves, we monitored the changes in NSC levels and constructed stem growth chronologies of Pinus halepensis trees of three drought stress levels growing in Yatir forest, Israel, at the dry limit of forest existence. • Moderately stressed and stressed trees showed 37% and 21% of the stem growth of healthy trees in 2012; 71% and 31% of the sap flux density; and 79% and 66% of the final needle length. In spite of these large reductions, both starch and soluble sugars concentrations in branches of these trees were similar in all trees throughout the dry season (2-4% dry mass). At the same time the root starch concentrations of moderately stressed and stressed trees were 47% and 58% of that of healthy trees, but never below 2% d.m. • Our results suggest that the drought-induced growth reduction is associated with a general C shortage, rather than competition with concurrent C storage. The relatively small effect of drought stress level on NSC dynamics, the maintenance of a 2% d.m. starch, and the continued sap flow indicate that a whole-tree C starvation is not likely to occur in these trees growing at the edge of the desert. Special request: If the abstract is not accepted for presentation in this session, please consider for presentation in session BG2.11 Plant traits and biogeochemical cycles. Thank you.

Tree fern trunks facilitate seedling regeneration in a productive lowland temperate rain forest.

PubMed

Gaxiola, Aurora; Burrows, Larry E; Coomes, David A

2008-03-01

Seedling regeneration on forest floors is often impaired by competition with established plants. In some lowland temperate rain forests, tree fern trunks provide safe sites on which tree species establish, and grow large enough to take root in the ground and persist. Here we explore the competitive and facilitative effects of two tree fern species, Cyathea smithii and Dicksonia squarrosa, on the epiphytic regeneration of tree species in nutrient-rich alluvial forests in New Zealand. The difficulties that seedlings have in establishing on vertical tree fern trunks were indicated by the following observations. First, seedling abundance was greatest on the oldest sections of tree fern trunks, near the base, suggesting that trunks gradually recruited more and more seedlings over time, but many sections of trunk were devoid of seedlings, indicating the difficulty of establishment on a vertical surface. Second, most seedlings were from small-seeded species, presumably because smaller seeds can easily lodge on tree fern trunks. Deer browsing damage was observed on 73% of epiphytic seedlings growing within 2 m of the ground, whereas few seedlings above that height were browsed. This suggests that tree ferns provide refugia from introduced deer, and may slow the decline in population size of deer-preferred species. We reasoned that tree ferns would compete with epiphytic seedlings for light, because below the tree fern canopy photosynthetically active radiation (PAR) was about 1% of above-canopy PAR. Frond removal almost tripled %PAR on the forest floor, leading to a significant increase in the height growth rate (HGR) of seedlings planted on the forest floor, but having no effects on the HGRs of epiphytic seedlings. Our study shows evidence of direct facilitative interactions by tree ferns during seedling establishment in plant communities associated with nutrient-rich soils.

Levels-of-growing-stock cooperative study in Douglas-fir: report no. 15—The Hoskins Study, 1963-1998.

Treesearch

David D. Marshall; Robert O. Curtis

2001-01-01

The cooperative levels-of-growing-stock (LOGS) study in Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) was begun to study the relations between growing stock, growth, cumulative wood production, and tree size in repeatedly thinned stands. This report summarizes results from the Hoskins installation through age 55. Growing stock has been allowed...

Early and late seasonal carbon sequestration and allocation in larch trees growing on permafrost in Central Siberia

NASA Astrophysics Data System (ADS)

Masyagina, Oxana; Prokushkin, Anatoly; Kirdyanov, Alexander; Artyukhov, Aleksey; Udalova, Tatiana; Senchenkov, Sergey; Rublev, Aleksey

2014-05-01

Despite large geographic extent of deciduous conifer species Larix gmelinii, its seasonal photosynthetic activity and translocation of photoassimilated carbon within a tree remain poorly studied. To get better insight into productivity of larch trees growing on permafrost soils in Siberian larch biome we aimed to analyze dynamics of foliage parameters (i.e. leaf area, biomass, %N, %P etc.), seasonal dynamics of photosynthetic activity and apply whole tree labeling by 13CO2, which is powerful and effective tool for tracing newly developed assimilates translocation to tissues and organs of a tree (Kagawa et al., 2006; Keel et al., 2012). Experimental plot has been established in mature 105 year-old larch stand located within the continuous permafrost area near Tura settlement (Central Siberia, 64o17'13" N, 100o11'55" E, 148 m a.s.l.). Trees selected for experiments represented mean tree of the stand. Measurements of seasonal photosynthetic activity and foliar biomass sampling were arranged from early growing season (June 8, 2013) until yellowing and senescence of needles on September 17, 2013. Labeling by 13C in whole tree chamber was conducted by three pulses ([CO2]max ≤ 2,500 ppmv, 13CO2 (30% v/v)) at the early (June) and late (August) phase of growing season for different trees in 3 replicates each time. Both early season and late season labeling experiments demonstrated high rate of 13CO2 assimilation and respective enrichment of needle tissues by 13C: δ13C increased from -28.7 up to +670‰ just after labeling. However, there was distinct post-labeling dynamics of needle δ13C among two seasonal experiments. At the early season 13C depletion in labeled needles was slower, and δ13C approached after 40 days ca. +110 ‰ and remained constant till senescence. In the late season (August) needles were losing labeled C with much faster rate and approached only +1.5 ‰ upon senescence (28 days exposition). These findings suggest that in early season ca. 20% of assimilated C was used for needle structures development. In opposite, in late season the 13C label having fewer fixation in needle was translocated to other tissues/organs (i.e. label appearing in twigs, phloem and accumulating in fine roots). Different 13C translocation rate in early and late season shows the importance of needle phenology as well as differences in dominant physiological processes among seasons. The research is supported by RFBR grant 13-04-00659a.

Polynomial-Time Algorithms for Building a Consensus MUL-Tree

PubMed Central

Cui, Yun; Jansson, Jesper

2012-01-01

Abstract A multi-labeled phylogenetic tree, or MUL-tree, is a generalization of a phylogenetic tree that allows each leaf label to be used many times. MUL-trees have applications in biogeography, the study of host–parasite cospeciation, gene evolution studies, and computer science. Here, we consider the problem of inferring a consensus MUL-tree that summarizes a given set of conflicting MUL-trees, and present the first polynomial-time algorithms for solving it. In particular, we give a straightforward, fast algorithm for building a strict consensus MUL-tree for any input set of MUL-trees with identical leaf label multisets, as well as a polynomial-time algorithm for building a majority rule consensus MUL-tree for the special case where every leaf label occurs at most twice. We also show that, although it is NP-hard to find a majority rule consensus MUL-tree in general, the variant that we call the singular majority rule consensus MUL-tree can be constructed efficiently whenever it exists. PMID:22963134

Polynomial-time algorithms for building a consensus MUL-tree.

PubMed

Cui, Yun; Jansson, Jesper; Sung, Wing-Kin

2012-09-01

A multi-labeled phylogenetic tree, or MUL-tree, is a generalization of a phylogenetic tree that allows each leaf label to be used many times. MUL-trees have applications in biogeography, the study of host-parasite cospeciation, gene evolution studies, and computer science. Here, we consider the problem of inferring a consensus MUL-tree that summarizes a given set of conflicting MUL-trees, and present the first polynomial-time algorithms for solving it. In particular, we give a straightforward, fast algorithm for building a strict consensus MUL-tree for any input set of MUL-trees with identical leaf label multisets, as well as a polynomial-time algorithm for building a majority rule consensus MUL-tree for the special case where every leaf label occurs at most twice. We also show that, although it is NP-hard to find a majority rule consensus MUL-tree in general, the variant that we call the singular majority rule consensus MUL-tree can be constructed efficiently whenever it exists.

Remote Sensing Investigations of Civil War Era Shipwrecks in the Vicinity of Fort St. Philip, Plaquemines Parish, Louisiana

DTIC Science & Technology

1994-04-05

forts. The tops of the masts are camouflaged with tree branches to hide their position from artillerymen in Fort Jackson. Source: Print Room, New York...point 52 m (170 ft) riverward from the river centerline. Proposed preparation of the bankline and adjacent area will include tree removal and grading by a...outgrows the black willow and becomes the dominant tree , except where frequent and extended flooding during the growing season covers the trees and limits

Digestive capacities, inbreeding and growth capacities in juvenile Arctic charr Salvelinus alpinus.

PubMed

Ditlecadet, D; Blier, P U; Le François, N R; Dufresne, F

2009-12-01

Genetic variation in growth performance was estimated in 26 families from two commercial strains of Arctic charr Salvelinus alpinus. Physiological determinants of growth and metabolic capacities were also assessed through enzymatic assays. A relatedness coefficient was attributed to each family using parental genotypes at seven microsatellite loci. After 15 months of growth, faster growing families had significantly lower relatedness coefficients than slower growing families, suggesting their value as indicators of growth potential. Individual fish that exhibited higher trypsin activity also displayed higher growth rate, suggesting that superior protein digestion capacities can be highly advantageous at early stages. Capacities to use amino acids as expressed by glutamate dehydrogenase (GDH) activities were lower in the liver of fast-growing fish (13-20%), whereas white muscle of fast-growing fish showed higher activities than that of slow-growing fish for amino acid metabolism and aerobic capacity [22-32% increase for citrate synthase (CS), aspartate aminotransferase (AAT) and GDH]. The generally higher glycolytic capacities (PK and LDH) in white muscle of fast-growing fish indicated higher burst swimming capacities and hence better access to food.

Variations of Mercury Concentrations in American Beech Foliage over a Growing Season

NASA Astrophysics Data System (ADS)

Stinson, I.; Tsui, M. T. K.; Chow, A. T.

2017-12-01

Accumulation of atmospheric gaseous mercury (Hg) in foliage is well known, however, a small fraction of Hg always exists as highly bioavailable methylmercury (MeHg) in foliage but the source of MeHg in foliage is unknown. Recent studies suggested in-vivo Hg methylation in foliage while others suggested external inputs (e.g., precipitation) as sources of MeHg in foliage. This study assesses the accumulation of total Hg and MeHg within the foliage of a small sample set of American Beech trees, one of the common tree species in the east coast and the study site is located within the campus of University of North Carolina - Greensboro, over the growing season in 2017 (spring, summer, and fall). In addition, this study evaluates the Hg concentrations in foliage as related to other physiological parameters (e.g., stomatal density, leaf area, chlorophyll, and carbon/nitrogen content) and the changes in environmental characteristics (e.g., sunlight) over the growing season. For this investigation, five American Beech trees with varying characteristics (height, age, and location) were selected. On a biweekly basis, starting late April 2017, foliage samples were collected and composited from different positions on each tree. For the samples processed to date, our results indicate that total Hg accumulation is occurring for all five trees with an initial mean value of 5.79 ng/g, increasing to a mean value of 13.9 ng/g over a ten-week period. Coincidentally, there has been a similar increase in chlorophyll (a+b) concentrations for the foliage, and there is a strong, positive relationship between chlorophyll and total-Hg concentrations. However, we found no relationships between total Hg concentrations and stomatal density of foliage or carbon/nitrogen content. This study is still ongoing and will continue through the end of the growing season in 2017. Additionally, from the same sample sets, besides total Hg analysis and other ancillary parameters in foliage, MeHg analysis will be conducted to determine its levels and changes over the growing season. Results of this study can shed new light onto the potential mechanisms of inorganic Hg and MeHg accumulation in tree foliage, which has been implied to be the main sources of toxic MeHg to enter the forest food webs.

Reliance on shallow soil water in a mixed-hardwood forest in central Pennsylvania.

PubMed

Gaines, Katie P; Stanley, Jane W; Meinzer, Frederick C; McCulloh, Katherine A; Woodruff, David R; Chen, Weile; Adams, Thomas S; Lin, Henry; Eissenstat, David M

2016-04-01

We investigated depth of water uptake of trees on shale-derived soils in order to assess the importance of roots over a meter deep as a driver of water use in a central Pennsylvania catchment. This information is not only needed to improve basic understanding of water use in these forests but also to improve descriptions of root function at depth in hydrologic process models. The study took place at the Susquehanna Shale Hills Critical Zone Observatory in central Pennsylvania. We asked two main questions: (i) Do trees in a mixed-hardwood, humid temperate forest in a central Pennsylvania catchment rely on deep roots for water during dry portions of the growing season? (ii) What is the role of tree genus, size, soil depth and hillslope position on the depth of water extraction by trees? Based on multiple lines of evidence, including stable isotope natural abundance, sap flux and soil moisture depletion patterns with depth, the majority of water uptake during the dry part of the growing season occurred, on average, at less than ∼60 cm soil depth throughout the catchment. While there were some trends in depth of water uptake related to genus, tree size and soil depth, water uptake was more uniformly shallow than we expected. Our results suggest that these types of forests may rely considerably on water sources that are quite shallow, even in the drier parts of the growing season. © The Author 2015. Published by Oxford University Press.

Reliance on shallow soil water in a mixed-hardwood forest in central Pennsylvania

PubMed Central

Gaines, Katie P.; Stanley, Jane W.; Meinzer, Frederick C.; McCulloh, Katherine A.; Woodruff, David R.; Chen, Weile; Adams, Thomas S.; Lin, Henry; Eissenstat, David M.

2016-01-01

We investigated depth of water uptake of trees on shale-derived soils in order to assess the importance of roots over a meter deep as a driver of water use in a central Pennsylvania catchment. This information is not only needed to improve basic understanding of water use in these forests but also to improve descriptions of root function at depth in hydrologic process models. The study took place at the Susquehanna Shale Hills Critical Zone Observatory in central Pennsylvania. We asked two main questions: (i) Do trees in a mixed-hardwood, humid temperate forest in a central Pennsylvania catchment rely on deep roots for water during dry portions of the growing season? (ii) What is the role of tree genus, size, soil depth and hillslope position on the depth of water extraction by trees? Based on multiple lines of evidence, including stable isotope natural abundance, sap flux and soil moisture depletion patterns with depth, the majority of water uptake during the dry part of the growing season occurred, on average, at less than ∼60 cm soil depth throughout the catchment. While there were some trends in depth of water uptake related to genus, tree size and soil depth, water uptake was more uniformly shallow than we expected. Our results suggest that these types of forests may rely considerably on water sources that are quite shallow, even in the drier parts of the growing season. PMID:26546366

Charcoal kiln relicts - a favorable site for tree growth?

NASA Astrophysics Data System (ADS)

Buras, Allan; Hirsch, Florian; van der Maaten, Ernst; Takla, Melanie; Räbiger, Christin; Cruz Garcia, Roberto; Schneider, Anna; Raab, Alexandra; Raab, Thomas; Wilmking, Martin

2015-04-01

Soils with incompletely combusted organic material (aka 'black carbon') are considered fertile for plant growth. Considerable enrichment of soils with black carbon is known from Chernozems, from anthropogenic induced altering of soils like the 'Terra Preta' in South America (e.g. Glaser, 2001), and from charcoal kiln relicts. Recent studies have reported a high spatial frequency of charcoal kiln relicts in the Northeastern German lowlands (Raab et al., 2015), which today are often overgrown by forest plantations. In this context the question arises whether these sites are favorable for tree growth. Here we compare the performance of 22 Pinus sylvestris individuals - a commonly used tree species in forestry - growing on charcoal kiln relicts with 22 control trees. Growth performance (height growth and diameter growth) of the trees was determined using dendrochronological techniques, i.e. standard ring-width measurements were undertaken on each two cores per tree and tree height was measured in the field. Several other wood properties such as annual wood density, average resin content, as well as wood chemistry were analyzed. Our results indicate that trees growing on charcoal kiln relicts grow significantly less and have a significantly lower wood density in comparison with control trees. Specific chemical components such as Manganese as well as resin contents were significantly higher in kiln trees. These results highlight that tree growth on charcoal kiln relicts is actually hampered instead of enhanced. Possibly this is a combined effect of differing physical soil properties which alter soil water accessibility for plants and differing chemical soil properties which may negatively affect tree growth either if toxic limits are surpassed or if soil nutrient availability is decreased. Additional soil analyses with respect to soil texture and soil chemistry shall reveal further insight into this hypothesis. Given the frequent distribution of charcoal kiln relicts in the German lowlands (e.g. Raab et al., 2015) and their potentially adverse effects on tree growth, these findings elucidate a yet unknown impact of past human activities on recent biological processes. Glaser, B., Haumaier, L., Guggenberger, G., and Zech, W., 2001: The 'Terra Preta' phenomenon: a model for sustainable agriculture in the humid tropics. Naturwissenschaften, 88, 37-41. Raab, A., Takla, M., Raab, T., Nicolay, A., Schneider, A., Rösler, H., Heußner, K.U., Bönisch, E., 2015. Pre-industrial charcoal production in Lower Lusatia (Brandenburg, Germany): Detection and evaluation of a large charcoal-burning field by combining archaeological studies, GIS-based analyses of shaded-relief maps and dendrochronological age determination. Quaternary International, doi: 10.1016/j.quaint.2014.09.041.

Branch growth and gas exchange in 13-year-old loblolly pine (Pinus taeda) trees in response to elevated carbon dioxide concentration and fertilization

Treesearch

Chris A. Maier; Kurt H. Johnsen; John Butnor; Lance W. Kress; Peter H. Anderson

2002-01-01

Summary We used whole-tree, open-top chambers to expose 13-year-old loblolly pine (Pinus taeda L.) trees, growing in soil with high or low nutrient availability, to either ambient or elevated (ambient + 200 µmol mol-1 ) carbon dioxide concentration ([CO2]) for 28 months. Branch growth...

Relationships among foliar chemistry, foliar polyamines, and soil chemistry in red spruce trees growing across the northeastern United States

Treesearch

Rakesh Minocha; Walter C. Shortle; Gregory B. Lawrence; Mark B. David; Subhash C. Minocha

1997-01-01

Forest trees are constantly exposed to various types of natural and anthropogenic stressors. A major long-term goal of our research is to develop a set of early physiological and biochemical markers of stress in trees before the appearance of visual symptoms. Six red spruce (Picea rubens Sarg.) stands from the northeastern United States were selected...

Selecting white oaks as parent stock for growing high-quality logs

Treesearch

Stephen G. Boyce

1963-01-01

One of the major objectives of the tree-improvement program of the Central States Forest Experiment Station of the U.S. Forest Service is to select and breed hardwood trees that are inherently capable of producing wood of high quality. To begin this program we must select from natural stands and plantations the best possible parent trees. In recent years we have...

Criterion 5: Maintenance of forest contributions to global carbon cycles

Treesearch

Stephen R. Shifley; Francisco X. Aguilar; Nianfu Song; Susan I. Stewart; David J. Nowak; Dale D. Gormanson; W. Keith Moser; Sherri Wormstead; Eric J. Greenfield

2012-01-01

Northern forests cover more than 42 percent of the region and are enormous reservoirs of carbon. Through photosynthesis, live trees emit oxygen in exchange for carbon dioxide they pull from the atmosphere. As a tree grows it stores carbon in wood above and below ground, and sequestered carbon comprises about half of its dry weight. Dead trees and down logs are also...

Patterns of diametric growth in stem-analyzed laurel trees (Cordia alliodora) in a Panamanian forest

Treesearch

Bernard R Parresol; Margaret S. Devall

2013-01-01

Based on cross-dated increment cores, yearly diameters of trees were reconstructed for 21 laurels (Cordia alliodora) growing in a natural secondary forest on Gigante Peninsula, Panama. From this sample of dominant-codominant trees, ages were 14–35 years with an average of 25 years. Growth typically slowed at 7 years old, indicating effects of...

Probability of Damage to Sidewalks and Curbs by Street Trees in the Tropics

Treesearch

John K. Francis; Bernard R. Parresol; Juana Marin de Patino

1996-01-01

For 75 trees each of 12 species growing along streets in San Juan, Puerto Rico and Merida, Mexico, diameter at breast height and distance to sidewalk or curb was measured and damage (cracking or raising) was evaluated. Logistic analysis was used to construct a model to predict probability of damage to sidewalk or curb. Distance to the pavement, diameter of the tree,...

An Extension of CART's Pruning Algorithm. Program Statistics Research Technical Report No. 91-11.

ERIC Educational Resources Information Center

Kim, Sung-Ho

Among the computer-based methods used for the construction of trees such as AID, THAID, CART, and FACT, the only one that uses an algorithm that first grows a tree and then prunes the tree is CART. The pruning component of CART is analogous in spirit to the backward elimination approach in regression analysis. This idea provides a tool in…

Roystonea borinquena O.F.

Treesearch

K.F Connor

2002-01-01

Roystonea borinquena is a rapidly growing tree with an average height of 12-18 m but it can reach up to 26.4 m. Young trees can average 1 m height growth annually. Diameters range from 25 to 70 cm; maximum age is 80-110 yrs. The tree has a smooth, gray trunk with a swollen base and gracefully drooping fronds. It is native to Puerto Rico, the...

Leaf flush in black walnut at several midwest locations

Treesearch

Calvin F. Bey

1972-01-01

Late spring frosts damage the tender new growth of black walnut trees, and the earliest trees to break dormancy are vulnerable for the longest period. Walnut trees growing in coves and low spots (frost pockets) are most vulnerable. If the terminal shoot is killed, one or more lateral buds at the base of the newly killed shoot commonly develop; generally, the result is...

Chemical composition of needles and cambial activity of stems of Scots pine trees affected by air pollutants in Polish forests

Treesearch

Wojciech Dmuchowski; Ewa U. Kurczynska; Wieslaw Wloch

1998-01-01

The impact of environmental pollution is defined for the chemical composition of Scots pine (Pinus sylvestris L.) needles and cambial activity in the tree stems in Polish forests. The research investigated 20-year-old trees growing in two areas in significantly different levels of pollution. The highly polluted area was located near the Warsaw...

Trait-specific responses of Scots pine to irrigation on a short vs long time scale.

PubMed

Feichtinger, Linda M; Eilmann, Britta; Buchmann, Nina; Rigling, Andreas

2015-02-01

In xeric environments, an increase in drought is related to reduced forest productivity and to enhanced mortality. However, predictions of future forest development remain difficult as the mechanisms underlying the responses of mature trees to long-term variations in water availability are not well understood. Here, we aimed to compare the adjustments in radial growth and morphological needle and shoot traits of mature Scots pine (Pinus sylvestris L.) growing along open water channels with those of control trees growing under naturally dry conditions at three sites in Valais, an inner-Alpine dry valley of Switzerland. The trees growing along two channels had been irrigated since germination (>70 years), whereas those along another previously drained channel had been irrigated only from 2010 to 2012, when the channel was re-established, and could thus be used to quantify the short-term effects of re-irrigation. Linear mixed models revealed that needle and shoot lengths as well as early- and late-wood basal area increments (BAIs) were most responsive to short-term and long-term irrigation. However, the magnitude of the response to the short-term irrigation exceeded that of the long-term irrigation. An extreme drought during the first half of 2011 led to an immediate decrease in the needle length, needle width, and early- and late-wood BAIs of the control trees, whereas the shoot length and needle numbers of control trees reacted with a 1-year delay to the extreme drought, as the shoots were responding to water availability of previous year's summer. Such negative responses to dry climatic conditions were even found in irrigated trees at one of our sites, which might be linked to tree growth becoming more sensitive to drought with increasing tree height and leaf area. In order to improve predictions of future forest development, long-term studies are necessary that consider lagged responses and adjustment processes of trees to changes in water availability. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Climatic signals in stable carbon isotope ratios of Juniper and Oak tree rings from northern Iran

NASA Astrophysics Data System (ADS)

Foroozan, Zeynab; Pourtahmasi, Kambiz; Bräuning, Achim

2018-06-01

Stable isotope ratios in tree rings are increasingly used as palaeoclimatic archive and ecophysiological indicator. We used cross-dated tree-ring series from different tree functional types, i.e. the evergreen conifer Juniperus polycarpus and the deciduous broadleaved Quercus macranthera. The samples were collected from Chaharbagh Gorgon forest in northern Iran, where oaks and junipers grow on north-facing and south-facing slopes, respectively. We extracted α-cellulose from the whole wood of annually separated tree rings and evaluated their potential for palaeoclimate reconstructions by examining the relationships between variations of δ13C in tree-ring cellulose and climate parameters. Based on tree-ring δ13C, we calculated intrinsic water use efficiency (iWUE) and evaluated changes in water availability at the study site over the past 50 years. We found significant negative relationships between tree-ring δ13C values in oak and juniper and precipitation in April and spring (only in junipers), while no significant correlations of tree-ring δ13C with temperature occurred. A strong negative relationship between tree-ring δ13C and summer Palmer Drought Severity Index (PDSI) was found at the drier site, indicating that juniper growing on south-facing slopes is a better indicator of drought stress in semiarid environments. A continuous increase in iWUE in both species was observed. δ13C variations in both species reflect the combined influence of climate and local site conditions. The interplay between climatic conditions and species behavior determines the inter-annual δ13C patterns of oak and juniper trees. Due to its more enriched mean δ13C (i.e., less negative average δ13C) and its higher climatic sensitivity, juniper is a more suitable proxy for paleoclimatic reconstructions in northern Iran.

Mapping growing stock volume and forest live biomass: a case study of the Polissya region of Ukraine

NASA Astrophysics Data System (ADS)

Bilous, Andrii; Myroniuk, Viktor; Holiaka, Dmytrii; Bilous, Svitlana; See, Linda; Schepaschenko, Dmitry

2017-10-01

Forest inventory and biomass mapping are important tasks that require inputs from multiple data sources. In this paper we implement two methods for the Ukrainian region of Polissya: random forest (RF) for tree species prediction and k-nearest neighbors (k-NN) for growing stock volume and biomass mapping. We examined the suitability of the five-band RapidEye satellite image to predict the distribution of six tree species. The accuracy of RF is quite high: ~99% for forest/non-forest mask and 89% for tree species prediction. Our results demonstrate that inclusion of elevation as a predictor variable in the RF model improved the performance of tree species classification. We evaluated different distance metrics for the k-NN method, including Euclidean or Mahalanobis distance, most similar neighbor (MSN), gradient nearest neighbor, and independent component analysis. The MSN with the four nearest neighbors (k = 4) is the most precise (according to the root-mean-square deviation) for predicting forest attributes across the study area. The k-NN method allowed us to estimate growing stock volume with an accuracy of 3 m3 ha-1 and for live biomass of about 2 t ha-1 over the study area.

Moisture rivals temperature in limiting photosynthesis by trees establishing beyond their cold-edge range limit under ambient and warmed conditions.

PubMed

Moyes, Andrew B; Germino, Matthew J; Kueppers, Lara M

2015-09-01

Climate change is altering plant species distributions globally, and warming is expected to promote uphill shifts in mountain trees. However, at many cold-edge range limits, such as alpine treelines in the western United States, tree establishment may be colimited by low temperature and low moisture, making recruitment patterns with warming difficult to predict. We measured response functions linking carbon (C) assimilation and temperature- and moisture-related microclimatic factors for limber pine (Pinus flexilis) seedlings growing in a heating × watering experiment within and above the alpine treeline. We then extrapolated these response functions using observed microclimate conditions to estimate the net effects of warming and associated soil drying on C assimilation across an entire growing season. Moisture and temperature limitations were each estimated to reduce potential growing season C gain from a theoretical upper limit by 15-30% (c. 50% combined). Warming above current treeline conditions provided relatively little benefit to modeled net assimilation, whereas assimilation was sensitive to either wetter or drier conditions. Summer precipitation may be at least as important as temperature in constraining C gain by establishing subalpine trees at and above current alpine treelines as seasonally dry subalpine and alpine ecosystems continue to warm. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

The role of hybridization in facilitating tree invasion

USDA-ARS?s Scientific Manuscript database

Hybridization events can generate additional genetic diversity on which natural selection can act and at times enhance invasiveness of the species. Invasive tree species are a growing ecological concern worldwide, and some of these invasions involve hybridization events pre- or post-introduction. Th...

Resolving the Nurse Crisis in San Antonio

DTIC Science & Technology

2007-04-01

health care services will rise dramatically. The reality is that the supply of nurses is not growing as fast as the demand for nurses is. This growing...shortage of nurses threatens the ability of hospitals and other health care providers to continue providing the health care services we all depend on...over the next decade, demand for health care services will rise dramatically. The reality is that the supply of nurses is not growing as fast as the

Opportunities for pulpwood growing investment in southeastern Ohio

Treesearch

David A. Gansner; Edgar T. Shaudys; Edgar T. Shaudys

1969-01-01

Growing hardwood trees for pulpwood offers an opportunity to overcome the objections which woodland owners have to managing their timber. Pulpwood growing is a relatively short-term venture requiring minimum investments of time, capital, and technical know-how. Also, hardwood pulpwood is likely to have reliable local market outlets in southeastern Ohio for years to...

Anomalous scaling in an age-dependent branching model.

PubMed

Keller-Schmidt, Stephanie; Tuğrul, Murat; Eguíluz, Víctor M; Hernández-García, Emilio; Klemm, Konstantin

2015-02-01

We introduce a one-parametric family of tree growth models, in which branching probabilities decrease with branch age τ as τ(-α). Depending on the exponent α, the scaling of tree depth with tree size n displays a transition between the logarithmic scaling of random trees and an algebraic growth. At the transition (α=1) tree depth grows as (logn)(2). This anomalous scaling is in good agreement with the trend observed in evolution of biological species, thus providing a theoretical support for age-dependent speciation and associating it to the occurrence of a critical point.

Why Trees Migrate So Fast: Confronting Theory with Dispersal Biology and the Paleorecord

Treesearch

James S. Clark

1998-01-01

Reid's paradox describes the fact that classical models cannot account for the rapid (102-103 yr-1) spread of trees at the end of the Pleistocene. I use field estimates of seed dispersal with an integrodifference equation and simulation models of population growth to show that dispersal data are...

Comparison of Rooting Strategies to Explore Rock Fractures for Shallow Soil-Adapted Tree Species with Contrasting Aboveground Growth Rates: A Greenhouse Microcosm Experiment

PubMed Central

Nie, Yunpeng; Chen, Hongsong; Ding, Yali; Yang, Jing; Wang, Kelin

2017-01-01

For tree species adapted to shallow soil environments, rooting strategies that efficiently explore rock fractures are important because soil water depletion occurs frequently. However, two questions: (a) to what extent shallow soil-adapted species rely on exploring rock fractures and (b) what outcomes result from drought stress, have rarely been tested. Therefore, based on the expectation that early development of roots into deep soil layers is at the cost of aboveground growth, seedlings of three tree species (Cyclobalanopsis glauca, Delavaya toxocarpa, and Acer cinnamomifolium) with distinct aboveground growth rates were selected from a typical shallow soil region. In a greenhouse experiment that mimics the basic features of shallow soil environments, 1-year-old seedlings were transplanted into simulated microcosms of shallow soil overlaying fractured bedrock. Root biomass allocation and leaf physiological activities, as well as leaf δ13C values were investigated and compared for two treatments: regular irrigation and repeated cycles of drought stress. Our results show that the three species differed in their rooting strategies in the context of encountering rock fractures, however, these strategies were not closely related to the aboveground growth rate. For the slowest-growing seedling, C. glauca, percentages of root mass in the fractures, as well as in the soil layer between soil and bedrock increased significantly under both treatments, indicating a specialized rooting strategy that facilitated the exploration of rock fractures. Early investment in deep root growth was likely critical to the establishment of this drought-vulnerable species. For the intermediate-growing, A. cinnamomifolium, percentages of root mass in the bedrock and interface soil layers were relatively low and exhibited no obvious change under either treatment. This limited need to explore rock fractures was compensated by a conservative water use strategy. For the fast-growing, D. toxocarpa, percentages of root mass in the bedrock and interface layers increased simultaneously under drought conditions, but not under irrigated conditions. This drought-induced rooting plasticity was associated with drought avoidance by this species. Although, root development might have been affected by the simulated microcosm, contrasting results among the three species indicated that efficient use of rock fractures is not a necessary or specialized strategy of shallow-soil adapted species. The establishment and persistence of these species relied on the mutual complementation between their species-specific rooting strategies and drought adaptations. PMID:29018464

Increase in platinum group elements in Mexico City as revealed from growth rings of Taxodium mucronatum ten.

PubMed

Morton-Bermea, Ofelia; Beramendi-Orosco, Laura; Martínez-Reyes, Ángeles; Hernández-Álvarez, Elizabeth; González-Hernández, Galia

2016-02-01

Tree rings may be used as indicators of contamination events providing information on the chronology and the elemental composition of the contamination. In this framework, we report PGEs enrichment in growth rings of Taxodium mucronatum ten for trees growing in the central area of Mexico City as compared to trees growing in a non-urban environment. Concentrations of PGE were determined by ICP-MS analysis on microwave-digested tree rings. The element found in higher concentrations was Pd (1.13-87.98 μg kg(-1)), followed by Rh (0.28-36.81 μg kg(-1)) and Pt (0.106-7.21 μg kg(-1)). The concentration trends of PGEs in the tree-ring sequences from the urban area presented significant correlation values when comparing between trees (r between 0.618 and 0.98, P < 0.025) and between elements within individual trees (r between 0.76 and 0.994, P < 0.01). Furthermore, a clear increase was observed for rings after 1997, with enrichment of up to 60 times the mean concentration found for the sequence from the non-urban area and up to 40 times the mean concentration for the pre-1991 period in the urban trees. These results also demonstrate the feasibility of applying T. mucronatum ten to be used as a bioindicator of the increase in PGE in urban environments.

Growth responses of Scots pine to climatic factors on reclaimed oil shale mined land.

PubMed

Metslaid, Sandra; Stanturf, John A; Hordo, Maris; Korjus, Henn; Laarmann, Diana; Kiviste, Andres

2016-07-01

Afforestation on reclaimed mining areas has high ecological and economic importance. However, ecosystems established on post-mining substrate can become vulnerable due to climate variability. We used tree-ring data and dendrochronological techniques to study the relationship between climate variables and annual growth of Scots pine (Pinus sylvestris L.) growing on reclaimed open cast oil shale mining areas in Northeast Estonia. Chronologies for trees of different age classes (50, 40, 30) were developed. Pearson's correlation analysis between radial growth indices and monthly climate variables revealed that precipitation in June-July and higher mean temperatures in spring season enhanced radial growth of pine plantations, while higher than average temperatures in summer months inhibited wood production. Sensitivity of radial increment to climatic factors on post-mining soils was not homogenous among the studied populations. Older trees growing on more developed soils were more sensitive to precipitation deficit in summer, while growth indices of two other stand groups (young and middle-aged) were highly correlated to temperature. High mean temperatures in August were negatively related to annual wood production in all trees, while trees in the youngest stands benefited from warmer temperatures in January. As a response to thinning, mean annual basal area increment increased up to 50 %. By managing tree competition in the closed-canopy stands, through the thinning activities, tree sensitivity and response to climate could be manipulated.

Distribution

Treesearch

John R. Jones

1985-01-01

Quaking aspen is the most widely distributed native North American tree species (Little 1971, Sargent 1890). It grows in a great diversity of regions, environments, and communities (Harshberger 1911). Only one deciduous tree species in the world, the closely related Eurasian aspen (Populus tremula), has a wider range (Weigle and Frothingham 1911)....

Leaf photosynthetic and water-relations responses for 'Valencia' orange trees exposed to oxidant air pollution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Olszyk, D.M.; Takemoto, B.K.; Poe, M.

1991-01-01

Leaf responses were measured to test a hypothesis that reduced photosynthetic capacity and/or altered water relations were associated with reductions in yield for 'Valencia' orange trees (Citrus sinensis (L.), Osbeck) exposed to ambient oxidant air pollution. Exposures were continuous for 4 years to three levels of oxidants (in charcoal-filtered, half-filtered, and non-filtered air). Oxidants had no effect on net leaf photosynthetic rates or on photosynthetic pigment concentrations. A single set of measurements indicated that oxidants increased leaf starch concentrations (24%) prior to flowering, suggesting a change in photosynthate allocation. Leaves exposed to oxidants had small, but consistent, changes in watermore » relations over the summer growing season, compared to trees growing in filtered air. Other changes included decreased stomatal conductance (12%) and transpiration (9%) rates, and increased water pressure potentials (5%). While all responses were subtle, their cumulative impact over 4 years indicated that 'Valencia' orange trees were subject to increased ambient oxidant stress.« less

[Decomposition and nutrient release of root with different diameters of three subalpine dominant trees in western area of Sichuan Province, China].

PubMed

Tang, Shi-shan; Yang, Wan-qin; Wang, Hai-peng; Xiong, Li; Nie, Fu-yu; Xu, Shen-feng

2015-10-01

In this study, a buried bag experiment was used to investigate mass loss and C, N and P release patterns of fine (≤2 mm), medium (2-5 mm) and coarse (≥ 5 mm) roots of 3 subalpine dominant trees, i. e., Betula albosinensis, Abies faxoniana and Picea asperata in the growing and non-growing seasons. In general, the remaining mass of B. albosinensis was lower than that of A. faxoniana and P. asperata. In addition, root remaining mass increased with the increase of root diameter for the same species. The mass losing rate in the non-growing season was 52.1%-64.4% of a year. The C release of B. albosinensis was the highest, but that of A. faxoniana was the lowest. Also, C release decreased with the increase of root diameter. N of A. faxoniana and P. asperata were enriched in the non-growing season but released in the growing season. However, the opposite pattern was found for B. albosinensis. During the non-growing season, the amount of N enrichment increased with the increase of root diameter. The P release of 3 species was characterized as the enrichment-release pattern. P enrichment of A. faxoniana was significantly greater than that of P. asperata and B. albosinensis. Nevertheless, no significant difference was observed between diameter sizes. In conclusion, diameter size had significant effect on root decomposition in the subalpine forests of western Sichuan, and the diameter effect was dependent on tree species and season.

Growth and elemental content of two tree species growing on abandoned coal fly ash basins. [Liquidambar styraciflua L. ; Platanus occidentalis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlson, C.L.; Adriano, D.C.

Differences in aboveground tissue concentrations of trace elements were assessed for sweetgum (Liquidambar styraciflua L.) and sycamore (Plantanus occidentalis L.) growing on two abandoned coal fly ash basins and a control soil. The wet basin (pH = 5.58) had originally received precipitator ash in an ash-water slurry, while the dry basin (pH = 8.26) had received both precipitator and bottom ash in dry form. In general, trees from the wet basin exhibited elevated trace element concentrations in comparison to the controls, while the dry basin trees exhibited reduced concentrations. On eof the most striking differenced in elemental concentrations among themore » ash basin and control trees was observed for Mn, with the control trees exhibiting concentrations orders of magnitude greater than the ash basin trees. Differences in foliar trace element concentrations among the sites can generally be explained by differences in substrate trace element concentrations and/or substrate pH. While trees from the wet ash basin generally had the highest trace element concentrations, these trees also attained the greatest height and diameter growth, suggesting that the elevated trace element concentrations in the wet basin substrate are not limiting the establishment of these two species. The greater height and diameter growth of the wet basin trees is presumably a result of the greater water-holding capacity of the substrate on this site. Differences in growth and tissue concentrations between sweetgum and sycamore highlight the importance of using more than one species when assessing metal toxicity or deficiency on a given substrate.« less

Responses of sap flow, leaf gas exchange and growth of hybrid aspen to elevated atmospheric humidity under field conditions

PubMed Central

Niglas, Aigar; Kupper, Priit; Tullus, Arvo; Sellin, Arne

2014-01-01

An increase in average air temperature and frequency of rain events is predicted for higher latitudes by the end of the 21st century, accompanied by a probable rise in air humidity. We currently lack knowledge on how forest trees acclimate to rising air humidity in temperate climates. We analysed the leaf gas exchange, sap flow and growth characteristics of hybrid aspen (Populus tremula × P. tremuloides) trees growing at ambient and artificially elevated air humidity in an experimental forest plantation situated in the hemiboreal vegetation zone. Humidification manipulation did not affect the photosynthetic capacity of plants, but did affect stomatal responses: trees growing at elevated air humidity had higher stomatal conductance at saturating photosynthetically active radiation (gs sat) and lower intrinsic water-use efficiency (IWUE). Reduced stomatal limitation of photosynthesis in trees grown at elevated air humidity allowed slightly higher net photosynthesis and relative current-year height increments than in trees at ambient air humidity. Tree responses suggest a mitigating effect of higher air humidity on trees under mild water stress. At the same time, trees at higher air humidity demonstrated a reduced sensitivity of IWUE to factors inducing stomatal closure and a steeper decline in canopy conductance in response to water deficit, implying higher dehydration risk. Despite the mitigating impact of increased air humidity under moderate drought, a future rise in atmospheric humidity at high latitudes may be disadvantageous for trees during weather extremes and represents a potential threat in hemiboreal forest ecosystems. PMID:24887000

Towards a better understanding of long-term wood-chemistry variations in old-growth forests: A case study on ancient Pinus uncinata trees from the Pyrenees.

PubMed

Hevia, Andrea; Sánchez-Salguero, Raúl; Camarero, J Julio; Buras, Allan; Sangüesa-Barreda, Gabriel; Galván, J Diego; Gutiérrez, Emilia

2018-06-01

Dendrochemical studies in old forests are still underdeveloped. Old trees growing in remote high-elevation areas far from direct human influence constitute a promising biological proxy for the long-term reconstructions of environmental changes using tree-rings. Furthermore, centennial-long chronologies of multi-elemental chemistry at inter- and intra-annual resolution are scarce. Here, we use a novel non-destructive method by applying Micro X-ray fluorescence (μXRF) to wood samples of old Pinus uncinata trees from two Pyrenean high-elevation forests growing on acidic and basic soils. To disentangle ontogenetic (changes in tree age and diameter) from environmental influences (e.g., climate warming) we compared element patterns in sapwood (SW) and heartwood (HW) during the pre-industrial (1700-1849) and industrial (1850-2008) periods. We quantified tree-ring growth, wood density and relative element concentrations at annual (TRW, tree-ring) to seasonal resolution (EW, earlywood; LW, latewood) and related them to climate variables (temperature and precipitation) and volcanic eruptions in the 18th and 19th centuries. We detected differences for most studied elements between SW and HW along the stem and also between EW and LW within rings. Long-term positive and negative trends were observed for Ca and K, respectively. Cl, P and S showed positive trends during the industrial period. However, differences between sites were also notable. Higher values of Mg, Al, Si and the Ca/Mn ratio were observed at the site with acidic soil. Growing-season temperatures were positively related to growth, maximum wood density and to the concentration of most elements. Peaks in S, Fe, Cl, Zn and Ca were linked to major volcanic eruptions (e.g., Tambora in 1815). Our results reveal the potential of long-term wood-chemistry studies based on the μXRF non-destructive technique to reconstruct environmental changes. Copyright © 2017 Elsevier B.V. All rights reserved.

Crop tree release improves competitiveness of northern red oak growing in association with black cherry

Treesearch

Thomas M. Schuler

2006-01-01

In 1993, a crop tree study was established in a pole-sized stand consisting of black cherry (Prunus serotina Ehrh.) and northern red oak (Quercus rubra L.). Black cherry was the predominant species in the stand and appeared to be on the verge of virtually eliminating northern red oak based on its greater height growth potential. To assess crop tree management for...

Growth and mortality of residual loblolly pines after a seed-tree cutting

Treesearch

S. Little; J. J. Mohr

1957-01-01

Should loblolly pine seed trees be left to grow for many years, or should they be harvested as soon as adequate amounts of reproduction have started? What should be done with the trees too small for sawlogs: should they be cut for pulpwood, or will they develop into high-quality stems? From a study started in 1951 and previously described (4) we now have indicative...

Comparative assessment of methods for estimating tree canopy cover across a rural-to-urban gradient in the mid-Atlantic region of the USA

Treesearch

Rachel Riemann; Greg C. Liknes; Jarlath O' Neil-Dunne; Chris Toney; Tonya Lister

2016-01-01

Tree canopy cover significantly affects human and wildlife habitats, local hydrology, carbon cycles, fire behavior, and ecosystem services of all types. In addition, changes in tree canopy cover are both indicators and consequences of a wide variety of disturbances from urban development to climate change. There is growing demand for this information nationwide and...

Black walnut on nonforest land in Kentucky

Treesearch

Ronald D. Lindmark; Paul S. DeBald

1969-01-01

Not all black walnut trees grow in the forest. Many are found in open places - along fence rows, in pastures, in narrow wooded strips. Trees in places like this are not counted in the forest surveys made by the U. S. Forest Service to find out how much timber we have. Yet such trees are part of our overall black walnut resource. The U.S.D.A. Forest Service undertook a...

Suppression of greasy spot disease caused by Mycosphaerella citri Whiteside on grapefruit trees in an organic orchard using an aqueous organic mixture of composted cornmeal, humic acid, molasses, and fish oil vs vegetable oil

USDA-ARS?s Scientific Manuscript database

Greasy spot disease of citrus, caused by the fungus Mycosphaerella citri Whiteside, afflicts citrus trees in all citrus-growing areas of the United States, eastern Mexico, Central America, and the Caribbean islands, causing premature defoliation, blemished fruit, and reduced tree vigor, yield, and f...

Survival of slash pine having fusiform rust disease varies with year of first stem infection and severity

Treesearch

R.C. Froelich; Ronald C. Schmidtling

1998-01-01

Probabilities of death of young slash pine infected by fusiform rust pathogen varied with timing and severity of infection. Trees in nine slash pine plantations varying widely in site quality and initial number of trees per acre had similar probabilities of death from rust. About 90 percent of trees with stem infections in the first three growing seasons died by age 15...

Planting and care of fine hardwood seedlings: Regenerating hardwoods in the Central Hardwoods Region: Soils

Treesearch

Felix Ponder, Jr.; Phillip E. Pope

2003-01-01

A large number of factors determine the successful establishment of trees. The site for a tree refers to where it grows, and includes living and nonliving factors that may have an impact on the tree's survival and growth. Site factors may be similar enough over a large area so as to be considered one site or different enough to be considered different sites....

National Forest Health Monitoring Program Wisconsin Street Tree Assessment 2002-2003, NA-FR-02-08

Treesearch

Anne Cumming; Daniel Twardus; Robert Hoehn; David Nowak; Manfred Mielke; Richard Rideout; Helen Butalla; Patricia Lebow

2008-01-01

Street trees grow along roadways within the public right-of-way. They are an important part of the urban forest due to their visibility to motorists and pedestrians, even if their numbers represent a small fraction of trees in urban areas. Little data are available that describe this resource at a large, statewide scale. In 2000, the Forest Service, U.S....

Dating young geomorphic surfaces using age of colonizing Douglas fir in southwestern Washington and northwestern Oregon, USA

USGS Publications Warehouse

Pierson, T.C.

2007-01-01

Dating of dynamic, young (<500 years) geomorphic landforms, particularly volcanofluvial features, requires higher precision than is possible with radiocarbon dating. Minimum ages of recently created landforms have long been obtained from tree-ring ages of the oldest trees growing on new surfaces. But to estimate the year of landform creation requires that two time corrections be added to tree ages obtained from increment cores: (1) the time interval between stabilization of the new landform surface and germination of the sampled trees (germination lag time or GLT); and (2) the interval between seedling germination and growth to sampling height, if the trees are not cored at ground level. The sum of these two time intervals is the colonization time gap (CTG). Such time corrections have been needed for more precise dating of terraces and floodplains in lowland river valleys in the Cascade Range, where significant eruption-induced lateral shifting and vertical aggradation of channels can occur over years to decades, and where timing of such geomorphic changes can be critical to emergency planning. Earliest colonizing Douglas fir (Pseudotsuga menziesii) were sampled for tree-ring dating at eight sites on lowland (<750 m a.s.l.), recently formed surfaces of known age near three Cascade volcanoes - Mount Rainier, Mount St. Helens and Mount Hood - in southwestern Washington and northwestern Oregon. Increment cores or stem sections were taken at breast height and, where possible, at ground level from the largest, oldest-looking trees at each study site. At least ten trees were sampled at each site unless the total of early colonizers was less. Results indicate that a correction of four years should be used for GLT and 10 years for CTG if the single largest (and presumed oldest) Douglas fir growing on a surface of unknown age is sampled. This approach would have a potential error of up to 20 years. Error can be reduced by sampling the five largest Douglas fir instead of the single largest. A GLT correction of 5 years should be added to the mean ring-count age of the five largest trees growing on the surface being dated, if the trees are cored at ground level. This correction would have an approximate error of ??5 years. If the trees are cored at about 1.4 m above the round surface (breast height), a CTG correction of 11 years should be added to the mean age of the five sampled trees (with an error of about ??7 years).