Correlation functions in the D1-D5 orbifold CFT

NASA Astrophysics Data System (ADS)

i Tormo, Joan Garcia; Taylor, Marika

2018-06-01

The D1-D5 system has an orbifold point in its moduli space, at which it may be described by an N = (4,4) supersymmetric sigma model with target space M N /S( N) where M is T^4 or K3. In this paper we consider correlation functions involving chiral operators constructed from twist fields: we find explicit expressions for processes involving a twist n operator joining n twist operators of arbitrary twist. These expressions are universal, in that they are independent of the choice of M , and the final results can be expressed in a compact form. We explain how these results are relevant to the black hole microstate programme: one point functions of chiral operators can be used to reconstruct AdS3 near horizon regions of D1-D5 microstates and to match microstates constructed in supergravity with the CFT.

Numerical computation of the effective-one-body potential q using self-force results

NASA Astrophysics Data System (ADS)

Akcay, Sarp; van de Meent, Maarten

2016-03-01

The effective-one-body theory (EOB) describes the conservative dynamics of compact binary systems in terms of an effective Hamiltonian approach. The Hamiltonian for moderately eccentric motion of two nonspinning compact objects in the extreme mass-ratio limit is given in terms of three potentials: a (v ) , d ¯ (v ) , q (v ) . By generalizing the first law of mechanics for (nonspinning) black hole binaries to eccentric orbits, [A. Le Tiec, Phys. Rev. D 92, 084021 (2015).] recently obtained new expressions for d ¯(v ) and q (v ) in terms of quantities that can be readily computed using the gravitational self-force approach. Using these expressions we present a new computation of the EOB potential q (v ) by combining results from two independent numerical self-force codes. We determine q (v ) for inverse binary separations in the range 1 /1200 ≤v ≲1 /6 . Our computation thus provides the first-ever strong-field results for q (v ) . We also obtain d ¯ (v ) in our entire domain to a fractional accuracy of ≳10-8 . We find that our results are compatible with the known post-Newtonian expansions for d ¯(v ) and q (v ) in the weak field, and agree with previous (less accurate) numerical results for d ¯(v ) in the strong field.

Anisotropic strange star with Tolman V potential

NASA Astrophysics Data System (ADS)

Shee, Dibyendu; Deb, Debabrata; Ghosh, Shounak; Ray, Saibal; Guha, B. K.

In this paper, we present a strange stellar model using Tolman V-type metric potential employing simplest form of the MIT bag equation of state (EOS) for the quark matter. We consider that the stellar system is spherically symmetric, compact and made of an anisotropic fluid. Choosing different values of n we obtain exact solutions of the Einstein field equations and finally conclude that for a specific value of the parameter n = 1/2, we find physically acceptable features of the stellar object. Further, we conduct different physical tests, viz., the energy condition, generalized Tolman-Oppeheimer-Volkoff (TOV) equation, Herrera’s cracking concept, etc., to confirm the physical validity of the presented model. Matching conditions provide expressions for different constants whereas maximization of the anisotropy parameter provides bag constant. By using the observed data of several compact stars, we derive exact values of some of the physical parameters and exhibit their features in tabular form. It is to note that our predicted value of the bag constant satisfies the report of CERN-SPS and RHIC.

Hi Image Synthesis of Southern Compact Groups

NASA Astrophysics Data System (ADS)

Babic, B.; Price, R. M.; Jones, K.

Four southern compact groups, the Hickson Compact Groups HCG 22 and HCG 26 (Hickson 1982), and the groups AM 1238 - 396 and ESO 410-G(024 - 026) have been imaged in Hi, along with 12 cm continuum using the Australia Telescope Compact Array (ATCA). The initial findings for the latter two groups are presented here. While ESO 410-G is not in fact a physical group, due to the discordant redshifts amongst the members, it is however presented here. Overall for all the groups we find no other sources of Hi in the field that might indicate that these are part of a larger loose group structure. This is not always the case, as with HCG 23 (Williams 1995) and HCG 95 (Hutchmeier 1999), both of whom find additional Hi sources within the primary beam accordant with the compact group's velocity. The Hi is also clearly associated with each of the individual member galaxies in all cases, except for HCG 26, which envelopes the whole group as was also shown by Williams and van Gorkom (Williams 1995).

How do roll compaction/dry granulation affect the tableting behaviour of inorganic materials? Comparison of four magnesium carbonates.

PubMed

Freitag, Franziska; Kleinebudde, Peter

2003-07-01

The effect of roll compaction/dry granulation on the particle and bulk material characteristics of different magnesium carbonates was evaluated. The flowability of all materials could be improved, even by the application of low specific compaction forces. The tablet properties made of powder and dry granulated magnesium carbonate were compared. Roll compaction/dry granulation resulted in a modified compactibility of the material and, consequently, tablets with reduced tensile strength. The higher relative tap density of the compacted material does not allow a densification to the same extent as the uncompacted powder. The degree of densification during tableting can be expressed as the ratio of the relative tablet density to the relative tap density of the feed material. Increasing the specific compaction forces resulted in higher apparent mean yield pressure, gained from Heckel plots, of all materials analysed. The partial loss of compactibility leads to the demand of low loads during roll compaction. Comparing the tablet properties of different magnesium carbonates reveals an obvious capping disposition. However, it depends on the type of magnesium carbonate, the specific compaction force and also on the tableting force applied.

NET23/STING Promotes Chromatin Compaction from the Nuclear Envelope

PubMed Central

de las Heras, Jose I.; Saiz-Ros, Natalia; Makarov, Alexandr A.; Lazou, Vassiliki; Meinke, Peter; Waterfall, Martin; Kelly, David A.; Schirmer, Eric C.

2014-01-01

Changes in the peripheral distribution and amount of condensed chromatin are observed in a number of diseases linked to mutations in the lamin A protein of the nuclear envelope. We postulated that lamin A interactions with nuclear envelope transmembrane proteins (NETs) that affect chromatin structure might be altered in these diseases and so screened thirty-one NETs for those that promote chromatin compaction as determined by an increase in the number of chromatin clusters of high pixel intensity. One of these, NET23 (also called STING, MITA, MPYS, ERIS, Tmem173), strongly promoted chromatin compaction. A correlation between chromatin compaction and endogenous levels of NET23/STING was observed for a number of human cell lines, suggesting that NET23/STING may contribute generally to chromatin condensation. NET23/STING has separately been found to be involved in innate immune response signaling. Upon infection cells make a choice to either apoptose or to alter chromatin architecture to support focused expression of interferon genes and other response factors. We postulate that the chromatin compaction induced by NET23/STING may contribute to this choice because the cells expressing NET23/STING eventually apoptose, but the chromatin compaction effect is separate from this as the condensation was still observed when cells were treated with Z-VAD to block apoptosis. NET23/STING-induced compacted chromatin revealed changes in epigenetic marks including changes in histone methylation and acetylation. This indicates a previously uncharacterized nuclear role for NET23/STING potentially in both innate immune signaling and general chromatin architecture. PMID:25386906

Quantum calculus of classical vortex images, integrable models and quantum states

NASA Astrophysics Data System (ADS)

Pashaev, Oktay K.

2016-10-01

From two circle theorem described in terms of q-periodic functions, in the limit q→1 we have derived the strip theorem and the stream function for N vortex problem. For regular N-vortex polygon we find compact expression for the velocity of uniform rotation and show that it represents a nonlinear oscillator. We describe q-dispersive extensions of the linear and nonlinear Schrodinger equations, as well as the q-semiclassical expansions in terms of Bernoulli and Euler polynomials. Different kind of q-analytic functions are introduced, including the pq-analytic and the golden analytic functions.

Fast particles in a steady-state compact FNS and compact ST reactor

NASA Astrophysics Data System (ADS)

Gryaznevich, M. P.; Nicolai, A.; Buxton, P.

2014-10-01

This paper presents results of studies of fast particles (ions and alpha particles) in a steady-state compact fusion neutron source (CFNS) and a compact spherical tokamak (ST) reactor with Monte-Carlo and Fokker-Planck codes. Full-orbit simulations of fast particle physics indicate that a compact high field ST can be optimized for energy production by a reduction of the necessary (for the alpha containment) plasma current compared with predictions made using simple analytic expressions, or using guiding centre approximation in a numerical code. Alpha particle losses may result in significant heating and erosion of the first wall, so such losses for an ST pilot plant have been calculated and total and peak wall loads dependence on the plasma current has been studied. The problem of dilution has been investigated and results for compact and big size devices are compared.

Distribution of compact object mergers around galaxies

NASA Astrophysics Data System (ADS)

Bulik, T.; Belczyński, K.; Zbijewski, W.

1999-09-01

Compact object mergers are one of the favoured models of gamma ray bursts (GRB). Using a binary population synthesis code we calculate properties of the population of compact object binaries; e.g. lifetimes and velocities. We then propagate them in galactic potentials and find their distribution in relation to the host.

The Effects of Nucleosome Positioning and Chromatin Architecture on Transgene Expression

ERIC Educational Resources Information Center

Kempton, Colton E.

2017-01-01

Eukaryotes use proteins to carefully package and compact their genomes to fit into the nuclei of their individual cells. Nucleosomes are the primary level of compaction. Nucleosomes are formed when DNA wraps around an octamer of histone proteins and a nucleosome's position can limit access to genetic regulatory elements. Therefore, nucleosomes…

A seismological model for earthquakes induced by fluid extraction from a subsurface reservoir

NASA Astrophysics Data System (ADS)

Bourne, S. J.; Oates, S. J.; van Elk, J.; Doornhof, D.

2014-12-01

A seismological model is developed for earthquakes induced by subsurface reservoir volume changes. The approach is based on the work of Kostrov () and McGarr () linking total strain to the summed seismic moment in an earthquake catalog. We refer to the fraction of the total strain expressed as seismic moment as the strain partitioning function, α. A probability distribution for total seismic moment as a function of time is derived from an evolving earthquake catalog. The moment distribution is taken to be a Pareto Sum Distribution with confidence bounds estimated using approximations given by Zaliapin et al. (). In this way available seismic moment is expressed in terms of reservoir volume change and hence compaction in the case of a depleting reservoir. The Pareto Sum Distribution for moment and the Pareto Distribution underpinning the Gutenberg-Richter Law are sampled using Monte Carlo methods to simulate synthetic earthquake catalogs for subsequent estimation of seismic ground motion hazard. We demonstrate the method by applying it to the Groningen gas field. A compaction model for the field calibrated using various geodetic data allows reservoir strain due to gas extraction to be expressed as a function of both spatial position and time since the start of production. Fitting with a generalized logistic function gives an empirical expression for the dependence of α on reservoir compaction. Probability density maps for earthquake event locations can then be calculated from the compaction maps. Predicted seismic moment is shown to be strongly dependent on planned gas production.

Testing the Binary Black Hole Nature of a Compact Binary Coalescence

NASA Astrophysics Data System (ADS)

Krishnendu, N. V.; Arun, K. G.; Mishra, Chandra Kant

2017-09-01

We propose a novel method to test the binary black hole nature of compact binaries detectable by gravitational wave (GW) interferometers and, hence, constrain the parameter space of other exotic compact objects. The spirit of the test lies in the "no-hair" conjecture for black holes where all properties of a Kerr black hole are characterized by its mass and spin. The method relies on observationally measuring the quadrupole moments of the compact binary constituents induced due to their spins. If the compact object is a Kerr black hole (BH), its quadrupole moment is expressible solely in terms of its mass and spin. Otherwise, the quadrupole moment can depend on additional parameters (such as the equation of state of the object). The higher order spin effects in phase and amplitude of a gravitational waveform, which explicitly contains the spin-induced quadrupole moments of compact objects, hence, uniquely encode the nature of the compact binary. Thus, we argue that an independent measurement of the spin-induced quadrupole moment of the compact binaries from GW observations can provide a unique way to distinguish binary BH systems from binaries consisting of exotic compact objects.

Testing the Binary Black Hole Nature of a Compact Binary Coalescence.

PubMed

Krishnendu, N V; Arun, K G; Mishra, Chandra Kant

2017-09-01

We propose a novel method to test the binary black hole nature of compact binaries detectable by gravitational wave (GW) interferometers and, hence, constrain the parameter space of other exotic compact objects. The spirit of the test lies in the "no-hair" conjecture for black holes where all properties of a Kerr black hole are characterized by its mass and spin. The method relies on observationally measuring the quadrupole moments of the compact binary constituents induced due to their spins. If the compact object is a Kerr black hole (BH), its quadrupole moment is expressible solely in terms of its mass and spin. Otherwise, the quadrupole moment can depend on additional parameters (such as the equation of state of the object). The higher order spin effects in phase and amplitude of a gravitational waveform, which explicitly contains the spin-induced quadrupole moments of compact objects, hence, uniquely encode the nature of the compact binary. Thus, we argue that an independent measurement of the spin-induced quadrupole moment of the compact binaries from GW observations can provide a unique way to distinguish binary BH systems from binaries consisting of exotic compact objects.

Collagen type XI alpha1 may be involved in the structural plasticity of the vertebral column in Atlantic salmon (Salmo salar L.).

PubMed

Wargelius, A; Fjelldal, P G; Nordgarden, U; Grini, A; Krossøy, C; Grotmol, S; Totland, G K; Hansen, T

2010-04-01

Atlantic salmon (Salmo salar L.) vertebral bone displays plasticity in structure, osteoid secretion and mineralization in response to photoperiod. Other properties of the vertebral bone, such as mineral content and mechanical strength, are also associated with common malformations in farmed Atlantic salmon. The biological mechanisms that underlie these changes in bone physiology are unknown, and in order to elucidate which factors might be involved in this process, microarray assays were performed on vertebral bone of Atlantic salmon reared under natural or continuous light. Eight genes were upregulated in response to continuous light treatment, whereas only one of them was upregulated in a duplicate experiment. The transcriptionally regulated gene was predicted to code for collagen type XI alpha1, a protein known to be involved in controlling the diameter of fibrillar collagens in mammals. Furthermore, the gene was highly expressed in the vertebrae, where spatial expression was found in trabecular and compact bone osteoblasts and in the chordoblasts of the notochordal sheath. When we measured the expression level of the gene in the tissue compartments of the vertebrae, the collagen turned out to be 150 and 25 times more highly expressed in the notochord and compact bone respectively, relative to the expression in the trabecular bone. Gene expression was induced in response to continuous light, and reduced in compressed vertebrae. The downregulation in compressed vertebrae was due to reduced expression in the compact bone, while expression in the trabecular bone and the notochord was unaffected. These data support the hypothesis that this gene codes for a presumptive collagen type XI alpha1, which may be involved in the regulatory pathway leading to structural adaptation of the vertebral architecture.

The Optical Green Valley Versus Mid-infrared Canyon in Compact Groups

NASA Technical Reports Server (NTRS)

Walker, Lisa May; Butterfield, Natalie; Johnson, Kelsey; Zucker, Catherine; Gallagher, Sarah; Konstantopoulos, Iraklis; Zabludoff, Ann; Hornschemeier, Ann E.; Tzanavaris, Panayiotis; Charlton, Jane C.

2013-01-01

Compact groups of galaxies provide conditions similar to those experienced by galaxies in the earlier universe. Recent work on compact groups has led to the discovery of a dearth of mid-infrared transition galaxies (MIRTGs) in Infrared Array Camera (3.6-8.0 micrometers) color space as well as at intermediate specific star formation rates. However, we find that in compact groups these MIRTGs have already transitioned to the optical ([g-r]) red sequence. We investigate the optical color-magnitude diagram (CMD) of 99 compact groups containing 348 galaxies and compare the optical CMD with mid-infrared (mid-IR) color space for compact group galaxies. Utilizing redshifts available from Sloan Digital Sky Survey, we identified new galaxy members for four groups. By combining optical and mid-IR data, we obtain information on both the dust and the stellar populations in compact group galaxies. We also compare with more isolated galaxies and galaxies in the Coma Cluster, which reveals that, similar to clusters, compact groups are dominated by optically red galaxies. While we find that compact group transition galaxies lie on the optical red sequence, LVL (Local Volume Legacy) + (plus) SINGS (Spitzer Infrared Nearby Galaxies Survey) mid-IR (infrared) transition galaxies span the range of optical colors. The dearth of mid-IR transition galaxies in compact groups may be due to a lack of moderately star-forming low mass galaxies; the relative lack of these galaxies could be due to their relatively small gravitational potential wells. This makes them more susceptible to this dynamic environment, thus causing them to more easily lose gas or be accreted by larger members.

Concordant p53 and mdm-2 protein expression in vulvar squamous cell carcinoma and adjacent lichen sclerosus.

PubMed

Carlson, J A; Amin, S; Malfetano, J; Tien, A T; Selkin, B; Hou, J; Goncharuk, V; Wilson, V L; Rohwedder, A; Ambros, R; Ross, J S

2001-06-01

To determine if carcinogenic events in vulvar skin precede the onset of morphologic atypia, the authors investigated for derangements in DNA content, cell proliferation, and cell death in vulvar carcinomas and surrounding skin in 140 samples of tumor and surrounding skin collected from 35 consecutive vulvectomy specimen for squamous cell carcinoma (SCC) or vulvar intraepithelial neoplasia (VIN) 3. Vulvar non-cancer excisions were used as controls. Investigations consisted of histologic classification and measurement of 9 variables--epidermal thickness (acanthosis and rete ridge length), immunolabeling index (LI) for 3 proteins (p53 protein, Ki-67, and mdm-2), pattern of p53 expression (dispersed vs. compact), DNA content index, and presence of aneuploidy by image analysis and apoptotic rate by Apotag labeling. Significant positive correlations were found for all nine variables studied versus increasing histologic severity in two proposed histologic stepwise models of vulvar carcinogenesis (lichen sclerosus (LS) and VIN 3 undifferentiated associated SCC groups). High p53 LI (>25) and the compact pattern of p53 expression (suspected oncoprotein) significantly correlated with LS and its associated vulvar samples compared with samples not associated with LS (P < or = 0.001). Furthermore, p53 LI, mdm-2 LI, and pattern of p53 expression were concordant between patient matched samples of LS and SCC. In addition, mdm-2 LI significantly correlated with dispersed pattern p53 LI suggesting a response to wild-type p53 protein accumulation. These findings support the hypothesis that neoplastic transformation occurs in sequential steps and compromises proteins involved in the cell cycle control. Concordance of p53 and mdm-2 protein expression in LS and adjacent SCC provides evidence that LS can act as a precursor lesion in the absence of morphologic atypia. Overexpression of mdm-2 with stabilization and inactivation of p53 protein may provide an alternate pathway for vulvar carcinogenesis.

Compactness of viral genomes: effect of disperse and localized random mutations

NASA Astrophysics Data System (ADS)

Lošdorfer Božič, Anže; Micheletti, Cristian; Podgornik, Rudolf; Tubiana, Luca

2018-02-01

Genomes of single-stranded RNA viruses have evolved to optimize several concurrent properties. One of them is the architecture of their genomic folds, which must not only feature precise structural elements at specific positions, but also allow for overall spatial compactness. The latter was shown to be disrupted by random synonymous mutations, a disruption which can consequently negatively affect genome encapsidation. In this study, we use three mutation schemes with different degrees of locality to mutate the genomes of phage MS2 and Brome Mosaic virus in order to understand the observed sensitivity of the global compactness of their folds. We find that mutating local stretches of their genomes’ sequence or structure is less disruptive to their compactness compared to inducing randomly-distributed mutations. Our findings are indicative of a mechanism for the conservation of compactness acting on a global scale of the genomes, and have several implications for understanding the interplay between local and global architecture of viral RNA genomes.

Endothelial deletion of Ino80 disrupts coronary angiogenesis and causes congenital heart disease.

PubMed

Rhee, Siyeon; Chung, Jae I; King, Devin A; D'amato, Gaetano; Paik, David T; Duan, Anna; Chang, Andrew; Nagelberg, Danielle; Sharma, Bikram; Jeong, Youngtae; Diehn, Maximilian; Wu, Joseph C; Morrison, Ashby J; Red-Horse, Kristy

2018-01-25

During development, the formation of a mature, well-functioning heart requires transformation of the ventricular wall from a loose trabecular network into a dense compact myocardium at mid-gestation. Failure to compact is associated in humans with congenital diseases such as left ventricular non-compaction (LVNC). The mechanisms regulating myocardial compaction are however still poorly understood. Here, we show that deletion of the Ino80 chromatin remodeler in vascular endothelial cells prevents ventricular compaction in the developing mouse heart. This correlates with defective coronary vascularization, and specific deletion of Ino80 in the two major coronary progenitor tissues-sinus venosus and endocardium-causes intermediate phenotypes. In vitro, endothelial cells promote myocardial expansion independently of blood flow in an Ino80-dependent manner. Ino80 deletion increases the expression of E2F-activated genes and endothelial cell S-phase occupancy. Thus, Ino80 is essential for coronary angiogenesis and allows coronary vessels to support proper compaction of the heart wall.

The Next Generation Virgo Cluster Survey. XII. Stellar Populations and Kinematics of Compact, Low-mass Early-type Galaxies from Gemini GMOS-IFU Spectroscopy

NASA Astrophysics Data System (ADS)

Guérou, Adrien; Emsellem, Eric; McDermid, Richard M.; Côté, Patrick; Ferrarese, Laura; Blakeslee, John P.; Durrell, Patrick R.; MacArthur, Lauren A.; Peng, Eric W.; Cuillandre, Jean-Charles; Gwyn, Stephen

2015-05-01

We present Gemini Multi Object Spectrograph integral-field unit (GMOS-IFU) data of eight compact, low-mass early-type galaxies (ETGs) in the Virgo cluster. We analyze their stellar kinematics and stellar population and present two-dimensional maps of these properties covering the central 5″ × 7″ region. We find a large variety of kinematics, from nonrotating to highly rotating objects, often associated with underlying disky isophotes revealed by deep images from the Next Generation Virgo Cluster Survey. In half of our objects, we find a centrally concentrated younger and more metal-rich stellar population. We analyze the specific stellar angular momentum through the λR parameter and find six fast rotators and two slow rotators, one having a thin counterrotating disk. We compare the local galaxy density and stellar populations of our objects with those of 39 more extended low-mass Virgo ETGs from the SMAKCED survey and 260 massive (M > 1010 {{M}⊙ }) ETGs from the ATLAS3D sample. The compact low-mass ETGs in our sample are located in high-density regions, often close to a massive galaxy, and have, on average, older and more metal-rich stellar populations than less compact low-mass galaxies. We find that the stellar population parameters follow lines of constant velocity dispersion in the mass-size plane, smoothly extending the comparable trends found for massive ETGs. Our study supports a scenario where low-mass compact ETGs have experienced long-lived interactions with their environment, including ram-pressure stripping and gravitational tidal forces, that may be responsible for their compact nature.

Single-stranded DNA condensed with poly-L-lysine results in nanometric particles that are significantly smaller, more stable in physiological ionic strength fluids and afford higher efficiency of gene delivery than their double-stranded counterparts.

PubMed

Molas, M; Bartrons, R; Perales, J C

2002-08-15

Nonviral gene transfer vectors have been actively studied in the past years in order to obtain structural entities with minimum size and defined shape. The final size of a gene transfer vector, which is compacted into unimolecular complexes, is directly proportional to the mass of the nucleic acid to be compacted. Thus, the purpose of this study was to assess the possibility of producing ssDNA vectors and their biophysical and biological characterization. We have obtained ssDNA/poly-L-lysine complexes that are significantly smaller than their double-stranded counterparts. We have also identified a lesser aggregative behavior of compacted single-stranded vs. double-stranded DNA vectors in the presence of physiological NaCl concentrations. Expression of compacted ssDNA is observed in hepatoma cell lines. Moreover, we have successfully delivered galactosylated ssDNA complexes into cells that express the asialoglycoprotein receptor via receptor-mediated endocytosis. The reduced size and biophysical behavior of ssDNA vectors may provide an advantage for transfection of eukaryotic cells.

Alternation of apoptotic and implanting genes expression of mouse embryos after re-vitrification

PubMed Central

Majidi Gharenaz, Nasrin; Movahedin, Mansoureh; Mazaheri, Zohreh; Pour beiranvand, Shahram

2016-01-01

Background: Nowadays, oocytes and embryos vitrification has become a routine technique. Based on clinical judgment, re-vitrification maybe required. But little is known about re-vitrification impact on genes expression. Objective: The impact of re-vitrification on apoptotic and implanting genes, Bax, Bcl-2 and ErbB4, at compaction stage embryos were evaluated in this study. Materials and Methods: In this experimental study, 8 cell embryos (n=240) were collected from female mature mice, 60-62 hr post HCG injection. The embryos were divided randomly to 3 groups included: fresh (n=80), vitrified at 8 cell stage (n=80), vitrified at 8 cell stage thawed and re-vitrified at compaction stage (n=80). Embryos were vitrified by using cryolock, (open system) described by Kuwayama. Q-PCR was used to examine the expression of Bax, Bcl2 ErbB4 genes in derived blastocysts. Results: Our result showed that expanded blastocyst rate was similar between vitrified and re-vitrified groups, while re-vitrified embryos showed significant decrease in expanded blastocyst rate comparing with fresh embryos (p=0.03). In addition, significant difference was observed on apoptotic gene expression when comparing re-vitrified and fresh embryos (p=0.004), however expression of Bax and Bcl-2 (apoptotic) genes didn't demonstrate a significant difference between re-vitrified and vitrified groups. The expression rate of ErbB4, an implantation gene was decreased in re-vitrified embryos comparing with fresh embryos (p=0.003), but it was similar between re-vitrified and vitrified embryos. Conclusion: Re-vitrification can alter the expression of Bax, Bcl-2 and ErbB4 genes and developmental rate of mouse embryos in compaction stage. PMID:27679826

Theory of Noise Generation from Moving Bodies with an Application to Helicopter Rotors

NASA Technical Reports Server (NTRS)

Farassat, F.

1975-01-01

Several expressions for the determination of the acoustic field of moving bodies are presented. The analysis is based on the Ffowcs Williams-Hawkings equation. Applying some proposed criteria, one of these expressions is singled out for numerical computation of acoustic pressure signature. The compactness of sources is not assumed and the main results are not restricted by the observer position. The distinction between compact and noncompact sources on moving surfaces is discussed. Some thickness noise calculations of helicopter rotors and comparison with experiments are included which suggest this mechanism as the source of high-speed blade slap of rotors.

Casimir force in Randall-Sundrum models with q+1 dimensions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Frank, Mariana; Turan, Ismail; Saad, Nasser

2008-09-01

We evaluate the Casimir force between two parallel plates in Randall-Sundrum (RS) scenarios extended by q compact dimensions. After giving exact expressions for one extra compact dimension (6D RS model), we generalize to an arbitrary number of compact dimensions. We present the complete calculation for both the two-brane scenario (RSI model) and the one-brane scenario (RSII model) using the method of summing over the modes. We investigate the effects of extra dimensions on the magnitude and sign of the force, and comment on limits for the size and number of the extra dimensions.

Hydraulic conductivity of compacted zeolites.

PubMed

Oren, A Hakan; Ozdamar, Tuğçe

2013-06-01

Hydraulic conductivities of compacted zeolites were investigated as a function of compaction water content and zeolite particle size. Initially, the compaction characteristics of zeolites were determined. The compaction test results showed that maximum dry unit weight (γ(dmax)) of fine zeolite was greater than that of granular zeolites. The γ(dmax) of compacted zeolites was between 1.01 and 1.17 Mg m(-3) and optimum water content (w(opt)) was between 38% and 53%. Regardless of zeolite particle size, compacted zeolites had low γ(dmax) and high w(opt) when compared with compacted natural soils. Then, hydraulic conductivity tests were run on compacted zeolites. The hydraulic conductivity values were within the range of 2.0 × 10(-3) cm s(-1) to 1.1 × 10(-7) cm s(-1). Hydraulic conductivity of all compacted zeolites decreased almost 50 times as the water content increased. It is noteworthy that hydraulic conductivity of compacted zeolite was strongly dependent on the zeolite particle size. The hydraulic conductivity decreased almost three orders of magnitude up to 39% fine content; then, it remained almost unchanged beyond 39%. Only one report was found in the literature on the hydraulic conductivity of compacted zeolite, which is in agreement with the findings of this study.

Myostatin propeptide mutation of the hypermuscular Compact mice decreases the formation of myostatin and improves insulin sensitivity.

PubMed

Kocsis, Tamas; Trencsenyi, Gyorgy; Szabo, Kitti; Baan, Julia Aliz; Muller, Geza; Mendler, Luca; Garai, Ildiko; Reinauer, Hans; Deak, Ferenc; Dux, Laszlo; Keller-Pinter, Aniko

2017-03-01

The TGFβ family member myostatin (growth/differentiation factor-8) is a negative regulator of skeletal muscle growth. The hypermuscular Compact mice carry the 12-bp Mstn(Cmpt-dl1Abc) deletion in the sequence encoding the propeptide region of the precursor promyostatin, and additional modifier genes of the Compact genetic background contribute to determine the full expression of the phenotype. In this study, by using mice strains carrying mutant or wild-type myostatin alleles with the Compact genetic background and nonmutant myostatin with the wild-type background, we studied separately the effect of the Mstn(Cmpt-dl1Abc) mutation or the Compact genetic background on morphology, metabolism, and signaling. We show that both the Compact myostatin mutation and Compact genetic background account for determination of skeletal muscle size. Despite the increased musculature of Compact s, the absolute size of heart and kidney is not influenced by myostatin mutation; however, the Compact genetic background increases them. Both Compact myostatin and genetic background exhibit systemic metabolic effects. The Compact mutation decreases adiposity and improves whole body glucose uptake, insulin sensitivity, and 18 FDG uptake of skeletal muscle and white adipose tissue, whereas the Compact genetic background has the opposite effect. Importantly, the mutation does not prevent the formation of mature myostatin; however, a decrease in myostatin level was observed, leading to altered activation of Smad2, Smad1/5/8, and Akt, and an increased level of p-AS160, a Rab-GTPase-activating protein responsible for GLUT4 translocation. Based on our analysis, the Compact genetic background strengthens the effect of myostatin mutation on muscle mass, but those can compensate for each other when systemic metabolic effects are compared. Copyright © 2017 the American Physiological Society.

The Effects of Nucleosome Positioning and Chromatin Architecture on Transgene Expression

NASA Astrophysics Data System (ADS)

Kempton, Colton E.

Eukaryotes use proteins to carefully package and compact their genomes to fit into the nuclei of their individual cells. Nucleosomes are the primary level of compaction. Nucleosomes are formed when DNA wraps around an octamer of histone proteins and a nucleosome's position can limit access to genetic regulatory elements. Therefore, nucleosomes represent a basic level of gene regulation. DNA and its associated proteins, called chromatin, is usually classified as euchromatin or heterochromatin. Euchromatin is transcriptionally active with loosely packed nucleosomes while heterochromatin is condensed with tightly packed nucleosomes and is transcriptionally silent. In order to become active, heterochromatin must first be remodeled. We have studied the effects of nucleosome positioning on transgene expression in vivo using Caenorhabditis elegans as a model. We show that both location and polarity of the DNA sequence can influence transgene expression. We also discuss some considerations for working with CRISPR/Cas9. A major reason for doing in vitro nucleosome reconstitutions is to determine the effects of DNA sequence on nucleosome formation and position. It has previously been implied that nucleosome reconstitutions are stochastic and not very reproducible. We show that nucleosome reconstitutions are highly reproducible under our reaction conditions. Our results also indicate that a minimum depth of 35X sequencing coverage be maintained for maximal gains in Pearson's correlation coefficients. Communicating science with others is an important skill for any researcher. The rising generation of scientists need mentors who can teach them how to be independent thinkers who can carry out scientific experiments and communicate their finding to others. With this goal in mind, we have devised a scaffolding pedagogical method to help transform undergraduates into confident independent thinkers and researchers.

Environmental influences on galaxy evolution

NASA Technical Reports Server (NTRS)

Zepf, Stephen E.; Whitmore, Bradley C.

1993-01-01

We investigate the role of mergers and interactions in the evolution of galaxies by studying galaxies in compact groups. Compact groups of galaxies have high spatial densities and low velocity dispersions making these regions ideal laboratories in which to study the effect of interactions and mergers. Based on a detailed spectroscopic and multi-color imaging study, we find that both the isophotal shapes and the stellar kinematics indicate that many of the elliptical galaxies in compact groups have been affected by tidal interactions. At the same time, however, we find that only a few elliptical galaxies in compact groups have evidence for the young stellar populations that would be expected if they are the result of recent merger of two spiral galaxies. Therefore, we conclude that tidal interactions affect galaxy properties at the current epoch, but the bulk of basic galaxy formation and transformation must have occurred at much higher redshift.

Hydrologic and geologic factors affecting land subsidence near Eloy, Arizona

USGS Publications Warehouse

Epstein, V.J.

1987-01-01

At an extensometer site near Eloy, Arizona, 1.09 m of land subsidence caused by groundwater withdrawal were measured by leveling in 1965-83. The extensometer, which partially penetrates the compressible sediments, recorded 0.82 m of compaction during the same period. By use of a one-dimensional model, cumulative daily compaction values were simulated to within an average of 0.0038 m of the actual values. Land subsidence was simulated to within an average of 0.011 m using the same model in conjunction with geohydrologic data of the sediments below the extensometer. A highly compressible clay layer that is 24.38 m thick was partially penetrated by the extensometer. The simulation indicated that the layer was driving compaction and land subsidence linearly with respect to time, despite the presence of other compacting layers. Because of its thickness and compressibility, this layer can be expected to continue to compact after applied vertical stresses have stopped increasing and other layers have stopped compacting. Sensitivity analysis indicated that the compressibility of fine-grained sediments (expressed as specific storage) is one of the factors to which compact is most sensitive. Preconsolidation stress and hydraulic conductivity also affect land subsidence near Eloy, Arizona. (Author 's abstract)

Algebraic Bethe ansatz for U(1) invariant integrable models: Compact and non-compact applications

NASA Astrophysics Data System (ADS)

Martins, M. J.; Melo, C. S.

2009-10-01

We apply the algebraic Bethe ansatz developed in our previous paper [C.S. Melo, M.J. Martins, Nucl. Phys. B 806 (2009) 567] to three different families of U(1) integrable vertex models with arbitrary N bond states. These statistical mechanics systems are based on the higher spin representations of the quantum group U[SU(2)] for both generic and non-generic values of q as well as on the non-compact discrete representation of the SL(2,R) algebra. We present for all these models the explicit expressions for both the on-shell and the off-shell properties associated to the respective transfer matrices eigenvalue problems. The amplitudes governing the vectors not parallel to the Bethe states are shown to factorize in terms of elementary building blocks functions. The results for the non-compact SL(2,R) model are argued to be derived from those obtained for the compact systems by taking suitable N→∞ limits. This permits us to study the properties of the non-compact SL(2,R) model starting from systems with finite degrees of freedom.

The design and implementation of on-line monitoring system for UHV compact shunt capacitors

NASA Astrophysics Data System (ADS)

Tao, Weiliang; Ni, Xuefeng; Lin, Hao; Jiang, Shengbao

2017-08-01

Because of the large capacity and compact structure of the UHV compact shunt capacitor, it is difficult to take effective measures to detect and prevent the faults. If the fault capacitor fails to take timely maintenance, it will pose a threat to the safe operation of the system and the life safety of the maintenance personnel. The development of UHV compact shunt capacitor on-line monitoring system can detect and record the on-line operation information of UHV compact shunt capacitors, analyze and evaluate the early fault warning signs, find out the fault capacitor or the capacitor with fault symptom, to ensure safe and reliable operation of the system.

Open strings and electric fields in compact spaces

NASA Astrophysics Data System (ADS)

Condeescu, Cezar; Dudas, Emilian; Pradisi, Gianfranco

2018-05-01

We analyse open strings with background electric fields in the internal space, T-dual to branes moving with constant velocities in the internal space. We find that the direction of the electric fields inside a two torus, dual to the D-brane velocities, has to be quantised such that the corresponding direction is compact. This implies that D-brane motion in the internal torus is periodic, with a periodicity that can be parametrically large in terms of the internal radii. By S-duality, this is mapped into an internal magnetic field in a three torus, a quantum mechanical analysis of which yields a similar result, i.e. the parallel direction to the magnetic field has to be compact. Furthermore, for the magnetic case, we find the Landau level degeneracy as being given by the greatest common divisor of the flux numbers. We carry on the string quantisation and derive the relevant partition functions for these models. Our analysis includes also the case of oblique electric fields which can arise when several stacks of branes are present. Compact dimensions and/or oblique sectors influence the energy loss of the system through pair-creation and thus can be relevant for inflationary scenarios with branes. Finally, we show that the compact energy loss is always larger than the non-compact one.

Gravitational radiation emitted when a mass falls onto a compact star.

NASA Astrophysics Data System (ADS)

Borelli, A.

1997-03-01

The authors study the energy spectrum related to the axial perturbations of a compact star when a particle falls spiralling onto it. They find that both slowly-damped quasi-normal modes and strongly damped w-modes are excited, and that a part of the energy in the process is associated to these w-modes. A substantial difference between the energy spectra of compact stars and black holes is shown.

Eigenvalue statistics for the sum of two complex Wishart matrices

NASA Astrophysics Data System (ADS)

Kumar, Santosh

2014-09-01

The sum of independent Wishart matrices, taken from distributions with unequal covariance matrices, plays a crucial role in multivariate statistics, and has applications in the fields of quantitative finance and telecommunication. However, analytical results concerning the corresponding eigenvalue statistics have remained unavailable, even for the sum of two Wishart matrices. This can be attributed to the complicated and rotationally noninvariant nature of the matrix distribution that makes extracting the information about eigenvalues a nontrivial task. Using a generalization of the Harish-Chandra-Itzykson-Zuber integral, we find exact solution to this problem for the complex Wishart case when one of the covariance matrices is proportional to the identity matrix, while the other is arbitrary. We derive exact and compact expressions for the joint probability density and marginal density of eigenvalues. The analytical results are compared with numerical simulations and we find perfect agreement.

Compact microchannel system

DOEpatents

Griffiths, Stewart

2003-09-30

The present invention provides compact geometries for the layout of microchannel columns through the use of turns and straight channel segments. These compact geometries permit the use of long separation or reaction columns on a small microchannel substrate or, equivalently, permit columns of a fixed length to occupy a smaller substrate area. The new geometries are based in part on mathematical analyses that provide the minimum turn radius for which column performance in not degraded. In particular, we find that straight channel segments of sufficient length reduce the required minimum turn radius, enabling compact channel layout when turns and straight segments are combined. The compact geometries are obtained by using turns and straight segments in overlapped or nested arrangements to form pleated or coiled columns.

LINCS Canvas Browser: interactive web app to query, browse and interrogate LINCS L1000 gene expression signatures.

PubMed

Duan, Qiaonan; Flynn, Corey; Niepel, Mario; Hafner, Marc; Muhlich, Jeremy L; Fernandez, Nicolas F; Rouillard, Andrew D; Tan, Christopher M; Chen, Edward Y; Golub, Todd R; Sorger, Peter K; Subramanian, Aravind; Ma'ayan, Avi

2014-07-01

For the Library of Integrated Network-based Cellular Signatures (LINCS) project many gene expression signatures using the L1000 technology have been produced. The L1000 technology is a cost-effective method to profile gene expression in large scale. LINCS Canvas Browser (LCB) is an interactive HTML5 web-based software application that facilitates querying, browsing and interrogating many of the currently available LINCS L1000 data. LCB implements two compacted layered canvases, one to visualize clustered L1000 expression data, and the other to display enrichment analysis results using 30 different gene set libraries. Clicking on an experimental condition highlights gene-sets enriched for the differentially expressed genes from the selected experiment. A search interface allows users to input gene lists and query them against over 100 000 conditions to find the top matching experiments. The tool integrates many resources for an unprecedented potential for new discoveries in systems biology and systems pharmacology. The LCB application is available at http://www.maayanlab.net/LINCS/LCB. Customized versions will be made part of the http://lincscloud.org and http://lincs.hms.harvard.edu websites. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

Radial oscillations and stability of compact stars in Eddington-inspired Born-Infeld gravity

NASA Astrophysics Data System (ADS)

Sham, Y.-H.; Lin, L.-M.; Leung, P. T.

2012-09-01

We study the hydrostatic equilibrium structure of compact stars in the Eddington-inspired Born-Infeld gravity recently proposed by Bañados and Ferreira [Phys. Rev. Lett. 105, 011101 (2010)]. We also develop a framework to study the radial perturbations and stability of compact stars in this theory. We find that the standard results of stellar stability still hold in this theory. The frequency square of the fundamental oscillation mode vanishes for the maximum-mass stellar configuration. The dependence of the oscillation mode frequencies on the coupling parameter κ of the theory is also investigated. We find that the fundamental mode is insensitive to the value of κ, while higher-order modes depend more strongly on κ.

Claudin 4 Is Differentially Expressed between Ovarian Cancer Subtypes and Plays a Role in Spheroid Formation

PubMed Central

Boylan, Kristin L. M.; Misemer, Benjamin; DeRycke, Melissa S.; Andersen, John D.; Harrington, Katherine M.; Kalloger, Steve E.; Gilks, C. Blake; Pambuccian, Stefan E.; Skubitz, Amy P. N.

2011-01-01

Claudin 4 is a cellular adhesion molecule that is frequently overexpressed in ovarian cancer and other epithelial cancers. In this study, we sought to determine whether the expression of claudin 4 is associated with outcome in ovarian cancer patients and may be involved in tumor progression. We examined claudin 4 expression in ovarian cancer tissues and cell lines, as well as by immunohistochemical staining of tissue microarrays (TMAs; n = 500), spheroids present in patients’ ascites, and spheroids formed in vitro. Claudin 4 was expressed in nearly 70% of the ovarian cancer tissues examined and was differentially expressed across ovarian cancer subtypes, with the lowest expression in clear cell subtype. No association was found between claudin 4 expression and disease-specific survival in any subtype. Claudin 4 expression was also observed in multicellular spheroids obtained from patients’ ascites. Using an in vitro spheroid formation assay, we found that NIH:OVCAR5 cells treated with shRNA against claudin 4 required a longer time to form compact spheroids compared to control NIH:OVCAR5 cells that expressed high levels of claudin 4. The inability of the NIH:OVCAR5 cells treated with claudin 4 shRNA to form compact spheroids was verified by FITC-dextran exclusion. These results demonstrate a role for claudin 4 and tight junctions in spheroid formation and integrity. PMID:21541062

A method for predicting asphalt mixture compactability and its influence on mechanical properties.

DOT National Transportation Integrated Search

2010-05-01

This project aimed at providing better understanding of the factors affecting the uniformity and level : of compaction; and the performance of asphalt pavements. TxDOT research report 0-5261-1 documented : some of the findings of this research projec...

Nuclear Rings in Galaxies - A Kinematic Perspective

NASA Technical Reports Server (NTRS)

Mazzuca, Lisa M.; Swaters, Robert A.; Knapen, Johan H.; Veilleux, Sylvain

2011-01-01

We combine DensePak integral field unit and TAURUS Fabry-Perot observations of 13 nuclear rings to show an interconnection between the kinematic properties of the rings and their resonant origin. The nuclear rings have regular and symmetric kinematics, and lack strong non-circular motions. This symmetry, coupled with a direct relationship between the position angles and ellipticities of the rings and those of their host galaxies, indicate the rings are in the same plane as the disc and are circular. From the rotation curves derived, we have estimated the compactness (v(sup 2)/r) up to the turnover radius, which is where the nuclear rings reside. We find that there is evidence of a correlation between compactness and ring width and size. Radially wide rings are less compact, and thus have lower mass concentration. The compactness increases as the ring width decreases. We also find that the nuclear ring size is dependent on the bar strength, with weaker bars allowing rings of any size to form.

Accretion torques in X-ray pulsars

NASA Technical Reports Server (NTRS)

Rappaport, S.; Joss, P. C.

1977-01-01

An analysis of the accretion process in an X-ray pulsar, whereby angular momentum is transferred to the star and its rotation period is changed, is presented, and an expression for the fractional rate of change of the pulse period in terms of X-ray luminosity and other star parameters is derived. It is shown that observed characteristic spin-up time scales for seven X-ray pulsars strongly support the view that in every source (1) the pulse period reflects the rotation period of a compact object, (2) the accretion is mediated by a disk surrounding the compact object and rotating in the same sense, and (3) the compact object is a neutron star rather than a white dwarf.

Kid-mediated chromosome compaction ensures proper nuclear envelope formation.

PubMed

Ohsugi, Miho; Adachi, Kenjiro; Horai, Reiko; Kakuta, Shigeru; Sudo, Katsuko; Kotaki, Hayato; Tokai-Nishizumi, Noriko; Sagara, Hiroshi; Iwakura, Yoichiro; Yamamoto, Tadashi

2008-03-07

Toward the end of mitosis, neighboring chromosomes gather closely to form a compact cluster. This is important for reassembling the nuclear envelope around the entire chromosome mass but not individual chromosomes. By analyzing mice and cultured cells lacking the expression of chromokinesin Kid/kinesin-10, we show that Kid localizes to the boundaries of anaphase and telophase chromosomes and contributes to the shortening of the anaphase chromosome mass along the spindle axis. Loss of Kid-mediated anaphase chromosome compaction often causes the formation of multinucleated cells, specifically at oocyte meiosis II and the first couple of mitoses leading to embryonic death. In contrast, neither male meiosis nor somatic mitosis after the morula-stage is affected by Kid deficiency. These data suggest that Kid-mediated anaphase/telophase chromosome compaction prevents formation of multinucleated cells. This protection is especially important during the very early stages of development, when the embryonic cells are rich in ooplasm.

Age and lesion-induced increases of GDNF transgene expression in brain following intracerebral injections of DNA nanoparticles.

PubMed

Yurek, D M; Hasselrot, U; Cass, W A; Sesenoglu-Laird, O; Padegimas, L; Cooper, M J

2015-01-22

In previous studies that used compacted DNA nanoparticles (DNP) to transfect cells in the brain, we observed higher transgene expression in the denervated striatum when compared to transgene expression in the intact striatum. We also observed that long-term transgene expression occurred in astrocytes as well as neurons. Based on these findings, we hypothesized that the higher transgene expression observed in the denervated striatum may be a function of increased gliosis. Several aging studies have also reported an increase of gliosis as a function of normal aging. In this study we used DNPs that encoded for human glial cell line-derived neurotrophic factor (hGDNF) and either a non-specific human polyubiquitin C (UbC) or an astrocyte-specific human glial fibrillary acidic protein (GFAP) promoter. The DNPs were injected intracerebrally into the denervated or intact striatum of young, middle-aged or aged rats, and glial cell line-derived neurotrophic factor (GDNF) transgene expression was subsequently quantified in brain tissue samples. The results of our studies confirmed our earlier finding that transgene expression was higher in the denervated striatum when compared to intact striatum for DNPs incorporating either promoter. In addition, we observed significantly higher transgene expression in the denervated striatum of old rats when compared to young rats following injections of both types of DNPs. Stereological analysis of GFAP+ cells in the striatum confirmed an increase of GFAP+ cells in the denervated striatum when compared to the intact striatum and also an age-related increase; importantly, increases in GFAP+ cells closely matched the increases in GDNF transgene levels. Thus neurodegeneration and aging may lay a foundation that is actually beneficial for this particular type of gene therapy while other gene therapy techniques that target neurons are actually targeting cells that are decreasing as the disease progresses. Copyright © 2014 IBRO. Published by Elsevier Ltd. All rights reserved.

Report of the workshop on intelligent compaction for soils and HMA.

DOT National Transportation Integrated Search

2008-04-01

This document summarizes the discussion and findings of a workshop on intelligent compaction for soils and hot-mix asphalt held in West Des Moines, Iowa, on April 2-4, 2008. The objective of the meeting was to provide a collaborative exchange of idea...

A linearization of quantum channels

NASA Astrophysics Data System (ADS)

Crowder, Tanner

2015-06-01

Because the quantum channels form a compact, convex set, we can express any quantum channel as a convex combination of extremal channels. We give a Euclidean representation for the channels whose inverses are also valid channels; these are a subset of the extreme points. They form a compact, connected Lie group, and we calculate its Lie algebra. Lastly, we calculate a maximal torus for the group and provide a constructive approach to decomposing any invertible channel into a product of elementary channels.

Optimization of hCFTR Lung Expression in Mice Using DNA Nanoparticles

PubMed Central

Padegimas, Linas; Kowalczyk, Tomasz H; Adams, Sam; Gedeon, Chris R; Oette, Sharon M; Dines, Karla; Hyatt, Susannah L; Sesenoglu-Laird, Ozge; Tyr, Olena; Moen, Robert C; Cooper, Mark J

2012-01-01

Efficient and prolonged human cystic fibrosis transmembrane conductance regulator (hCFTR) expression is a major goal for cystic fibrosis (CF) lung therapy. A hCFTR expression plasmid was optimized as a payload for compacted DNA nanoparticles formulated with polyethylene glycol (PEG)-substituted 30-mer lysine peptides. A codon-optimized and CpG-reduced hCFTR synthetic gene (CO-CFTR) was placed in a polyubiquitin C expression plasmid. Compared to hCFTR complementary DNA (cDNA), CO-CFTR produced a ninefold increased level of hCFTR protein in transfected HEK293 cells and, when compacted as DNA nanoparticles, produced a similar improvement in lung mRNA expression in Balb/c and fatty acid binding protein promoter (FABP) CF mice, although expression duration was transient. Various vector modifications were tested to extend duration of CO-CFTR expression. A novel prolonged expression (PE) element derived from the bovine growth hormone (BGH) gene 3′ flanking sequence produced prolonged expression of CO-CFTR mRNA at biologically relevant levels. A time course study in the mouse lung revealed that CO-CFTR mRNA did not change significantly, with CO-CFTR/mCFTR geometric mean ratios of 94% on day 2, 71% on day 14, 53% on day 30, and 14% on day 59. Prolonged CO-CFTR expression is dependent on the orientation of the PE element and its transcription, is not specific to the UbC promoter, and is less dependent on other vector backbone elements. PMID:21952168

Mechanical compaction directly modulates the dynamics of bile canaliculi formation.

PubMed

Wang, Yan; Toh, Yi-Chin; Li, Qiushi; Nugraha, Bramasta; Zheng, Baixue; Lu, Thong Beng; Gao, Yi; Ng, Mary Mah Lee; Yu, Hanry

2013-02-01

Homeostatic pressure-driven compaction is a ubiquitous mechanical force in multicellular organisms and is proposed to be important in the maintenance of multicellular tissue integrity and function. Previous cell-free biochemical models have demonstrated that there are cross-talks between compaction forces and tissue structural functions, such as cell-cell adhesion. However, its involvement in physiological tissue function has yet to be directly demonstrated. Here, we use the bile canaliculus (BC) as a physiological example of a multicellular functional structure in the liver, and employ a novel 3D microfluidic hepatocyte culture system to provide an unprecedented opportunity to experimentally modulate the compaction states of primary hepatocyte aggregates in a 3D physiological-mimicking environment. Mechanical compaction alters the physical attributes of the hepatocyte aggregates, including cell shape, cell packing density and cell-cell contact area, but does not impair the hepatocytes' remodeling and functional capabilities. Characterization of structural and functional polarity shows that BC formation in compact hepatocyte aggregates is accelerated to as early as 12 hours post-seeding; whereas non-compact control requires 48 hours for functional BC formation. Further dynamic immunofluorescence imaging and gene expression profiling reveal that compaction accelerated BC formation is accompanied by changes in actin cytoskeleton remodeling dynamics and transcriptional levels of hepatic nuclear factor 4α and Annexin A2. Our report not only provides a novel strategy of modeling BC formation for in vitro hepatology research, but also shows a first instance that homeostatic pressure-driven compaction force is directly coupled to the higher-order multicellular functions.

Verbs and Noun Phrases--Two Tendencies in Philosophical Essays.

ERIC Educational Resources Information Center

Koskela, Merja

Noun phrases are often used in academic writing to express the abstract character of the topics discussed. Nouns, especially nominalizations, make it possible to express complicated ideas in a condensed and compact manner, whereas the corresponding verbs make texts easier to understand and more dynamic. In this paper, a case study is presented…

Stability of anisotropic self-gravitating fluids

NASA Astrophysics Data System (ADS)

Ahmad, S.; Jami, A. Rehman; Mughal, M. Z.

2018-06-01

The aim of this paper is to study the stability as well as the existence of self-gravitating anisotropic fluids in Λ-dominated era. Taking a cylindrically symmetric and static spacetime, we computed the corresponding equations of motion in the background of anisotropic fluid distributions. The realistic formulation of energy momentum tensor as well as theoretical model of the scale factors are considered in order to describe some physical properties of the anisotropic fluids. To find the stability of the compact star, we have used Herrera’s technique which is based on finding the radial and the transverse components of the speed of sound. Moreover, the behaviors of other physical quantities are also discussed like anisotropy, matching conditions of interior metric and exterior metric and compactness of the compact structures are also discussed.

Investigation and development of a non-destructive system to evaluate critical properties of asphalt pavements during the compaction process.

DOT National Transportation Integrated Search

2013-10-01

The purpose of this report is to present findings from a two-stage investigation to develop a non-destructive system to : evaluate critical properties and characteristics of asphalt pavements during the compaction process. The first stage aligned : c...

Report of the workshop on intelligent compaction for soils and HMA : executive summary.

DOT National Transportation Integrated Search

2008-04-01

This document summarizes the discussion and findings of a workshop on intelligent compaction for soils and hot-mix asphalt held in West Des Moines, Iowa, on April 2-4, 2008. The objective of the meeting was to provide a collaborative exchange of idea...

A compact, in vivo screen of all 6-mers reveals drivers of tissue-specific expression and guides synthetic regulatory element design.

PubMed

Smith, Robin P; Riesenfeld, Samantha J; Holloway, Alisha K; Li, Qiang; Murphy, Karl K; Feliciano, Natalie M; Orecchia, Lorenzo; Oksenberg, Nir; Pollard, Katherine S; Ahituv, Nadav

2013-07-18

Large-scale annotation efforts have improved our ability to coarsely predict regulatory elements throughout vertebrate genomes. However, it is unclear how complex spatiotemporal patterns of gene expression driven by these elements emerge from the activity of short, transcription factor binding sequences. We describe a comprehensive promoter extension assay in which the regulatory potential of all 6 base-pair (bp) sequences was tested in the context of a minimal promoter. To enable this large-scale screen, we developed algorithms that use a reverse-complement aware decomposition of the de Bruijn graph to design a library of DNA oligomers incorporating every 6-bp sequence exactly once. Our library multiplexes all 4,096 unique 6-mers into 184 double-stranded 15-bp oligomers, which is sufficiently compact for in vivo testing. We injected each multiplexed construct into zebrafish embryos and scored GFP expression in 15 tissues at two developmental time points. Twenty-seven constructs produced consistent expression patterns, with the majority doing so in only one tissue. Functional sequences are enriched near biologically relevant genes, match motifs for developmental transcription factors, and are required for enhancer activity. By concatenating tissue-specific functional sequences, we generated completely synthetic enhancers for the notochord, epidermis, spinal cord, forebrain and otic lateral line, and show that short regulatory sequences do not always function modularly. This work introduces a unique in vivo catalog of short, functional regulatory sequences and demonstrates several important principles of regulatory element organization. Furthermore, we provide resources for designing compact, reverse-complement aware k-mer libraries.

How much land for your sand: effects of vegetation and compaction on crevasse splay formation

NASA Astrophysics Data System (ADS)

Nienhuis, J.; Tornqvist, T. E.; Esposito, C. R.

2016-12-01

Crevasse splays, failed avulsions that make up a significant portion of fluvio-deltaic overbank architecture in the Mississippi River Delta, are a natural analog for sediment diversions that are being planned to rebuild or sustain coastal wetlands. Here we use Delft3D to study the rates and mechanisms of crevasse splay growth. Because crevasse splays often form in peat-rich and vegetated environments, we have modified Delft3D to include simple formulations for the dynamic interaction between morphodynamics, vegetation, and soil compaction. Detailed stratigraphic data from prehistoric splays in the Mississippi River Delta provide useful constraints on long-term compaction rates, sedimentology, and splay volumes. We find that compaction and the absence of vegetation increase the lifespan of crevasse splays, sometimes from 900 to 4000 flood days (days during which the crevasse is geomorphically active, equivalent to model days in our simulations). Additionally, we find that in a few tested scenarios vegetation primarily acts to increase channel depths and flush out fine-grained sediment towards the flood-basin, decreasing the bulk mud capture efficiency of the splay. One model experiment with moderate vegetation heights and low susceptibility for soil compaction was a particularly "efficient" sediment diversion: every 1 m3 of imported sediment resulted in 2.55 m2 of new land.

The Ultraviolet and Infrared Star Formation Rates of Compact Group Galaxies: An Expanded Sample

NASA Technical Reports Server (NTRS)

Lenkic, Laura; Tzanavaris, Panayiotis; Gallagher, Sarah C.; Desjardins, Tyler D.; Walker, Lisa May; Johnson, Kelsey E.; Fedotov, Konstantin; Charlton, Jane; Cardiff, Ann H.; Durell, Pat R.

2016-01-01

Compact groups of galaxies provide insight into the role of low-mass, dense environments in galaxy evolution because the low velocity dispersions and close proximity of galaxy members result in frequent interactions that take place over extended time-scales. We expand the census of star formation in compact group galaxies by Tzanavaris et al. (2010) and collaborators with Swift UVOT, Spitzer IRAC and MIPS 24 m photometry of a sample of 183 galaxies in 46 compact groups. After correcting luminosities for the contribution from old stellar populations, we estimate the dust-unobscured star formation rate (SFRUV) using the UVOT uvw2 photometry. Similarly, we use the MIPS 24 m photometry to estimate the component of the SFR that is obscured by dust (SFRIR). We find that galaxies which are MIR-active (MIR-red), also have bluer UV colours, higher specific SFRs, and tend to lie in Hi-rich groups, while galaxies that are MIR-inactive (MIR-blue) have redder UV colours, lower specific SFRs, and tend to lie in Hi-poor groups. We find the SFRs to be continuously distributed with a peak at about 1 M yr1, indicating this might be the most common value in compact groups. In contrast, the specific SFR distribution is bimodal, and there is a clear distinction between star-forming and quiescent galaxies. Overall, our results suggest that the specific SFR is the best tracer of gas depletion and galaxy evolution in compact groups.

Evolution of histone 2A for chromatin compaction in eukaryotes

PubMed Central

Macadangdang, Benjamin R; Oberai, Amit; Spektor, Tanya; Campos, Oscar A; Sheng, Fang; Carey, Michael F; Vogelauer, Maria; Kurdistani, Siavash K

2014-01-01

During eukaryotic evolution, genome size has increased disproportionately to nuclear volume, necessitating greater degrees of chromatin compaction in higher eukaryotes, which have evolved several mechanisms for genome compaction. However, it is unknown whether histones themselves have evolved to regulate chromatin compaction. Analysis of histone sequences from 160 eukaryotes revealed that the H2A N-terminus has systematically acquired arginines as genomes expanded. Insertion of arginines into their evolutionarily conserved position in H2A of a small-genome organism increased linear compaction by as much as 40%, while their absence markedly diminished compaction in cells with large genomes. This effect was recapitulated in vitro with nucleosomal arrays using unmodified histones, indicating that the H2A N-terminus directly modulates the chromatin fiber likely through intra- and inter-nucleosomal arginine–DNA contacts to enable tighter nucleosomal packing. Our findings reveal a novel evolutionary mechanism for regulation of chromatin compaction and may explain the frequent mutations of the H2A N-terminus in cancer. DOI: http://dx.doi.org/10.7554/eLife.02792.001 PMID:24939988

Compaction of quasi-one-dimensional elastoplastic materials.

PubMed

Shaebani, M Reza; Najafi, Javad; Farnudi, Ali; Bonn, Daniel; Habibi, Mehdi

2017-06-06

Insight into crumpling or compaction of one-dimensional objects is important for understanding biopolymer packaging and designing innovative technological devices. By compacting various types of wires in rigid confinements and characterizing the morphology of the resulting crumpled structures, here, we report how friction, plasticity and torsion enhance disorder, leading to a transition from coiled to folded morphologies. In the latter case, where folding dominates the crumpling process, we find that reducing the relative wire thickness counter-intuitively causes the maximum packing density to decrease. The segment size distribution gradually becomes more asymmetric during compaction, reflecting an increase of spatial correlations. We introduce a self-avoiding random walk model and verify that the cumulative injected wire length follows a universal dependence on segment size, allowing for the prediction of the efficiency of compaction as a function of material properties, container size and injection force.

The abundance of compact quiescent galaxies since z ˜ 0.6

NASA Astrophysics Data System (ADS)

Charbonnier, Aldée; Huertas-Company, Marc; Gonçalves, Thiago S.; Menéndez-Delmestre, Karín; Bundy, Kevin; Galliano, Emmanuel; Moraes, Bruno; Makler, Martín; Pereira, Maria E. S.; Erben, Thomas; Hildebrandt, Hendrik; Shan, Huan-Yuan; Caminha, Gabriel B.; Grossi, Marco; Riguccini, Laurie

2017-08-01

We set out to quantify the number density of quiescent massive compact galaxies at intermediate redshifts. We determine structural parameters based on I-band imaging using the Canada-France-Hawaii Telescope (CFHT) equatorial Sloan Digital Sky Survey (SDSS) Stripe 82 (CS82) survey (˜170 deg2) taking advantage of an exquisite median seeing of ˜0.6 arcsec. We select compact massive (M⋆ > 5 × 1010 M⊙) galaxies within the redshift range of 0.2 < z < 0.6. The large volume sampled allows to decrease the effect of cosmic variance that has hampered the calculation of the number density for this enigmatic population in many previous studies. We undertake an exhaustive analysis in an effort to untangle the various findings inherent to the diverse definition of compactness present in the literature. We find that the absolute number of compact galaxies is very dependent on the adopted definition and can change up to a factor of >10. We systematically measure a factor of ˜5 more compacts at the same redshift than what was previously reported on smaller fields with Hubble Space Telescope (HST) imaging, which are more affected by cosmic variance. This means that the decrease in number density from z ˜ 1.5 to z ˜ 0.2 might be only of a factor of ˜2-5, significantly smaller than what was previously reported. This supports progenitor bias as the main contributor to the size evolution. This milder decrease is roughly compatible with the predictions from recent numerical simulations. Only the most extreme compact galaxies, with Reff < 1.5 × (M⋆/1011 M⊙)0.75 and M⋆ > 1010.7 M⊙, appear to drop in number by a factor of ˜20 and hence likely experience a noticeable size evolution.

Structural maintenance of chromosome complexes differentially compact mitotic chromosomes according to genomic context

PubMed Central

Schalbetter, S. A.; Goloborodko, A.; Fudenberg, G.; Belton, J.-M.; Miles, C.; Yu, M.; Dekker, J.; Mirny, L.; Baxter, J.

2017-01-01

Structural Maintenance of Chromosomes (SMC) protein complexes are key determinants of chromosome conformation. Using Hi-C and polymer modeling, we study how cohesin and condensin, two deeply conserved SMC complexes, organize chromosomes in the budding yeast Saccharomyces cerevisiae. The canonical role of cohesin is to co-align sister chromatids whilst condensin generally compacts mitotic chromosomes. We find strikingly different roles for the two complexes in budding yeast mitosis. First, cohesin is responsible for compacting mitotic chromosome arms, independently of sister chromatid cohesion. Polymer simulations demonstrate this role can be fully accounted for through cis-looping of chromatin. Second, condensin is generally dispensable for compaction along chromosome arms. Instead it plays a targeted role compacting the rDNA proximal regions and promoting resolution of peri-centromeric regions. Our results argue that the conserved mechanism of SMC complexes is to form chromatin loops and that distinct SMC-dependent looping activities are selectively deployed to appropriately compact chromosomes. PMID:28825700

On Critical States, Rupture States and Interlocking Strength of Granular Materials.

PubMed

Szalwinski, Chris M

2017-07-27

The Mohr-Coulomb theory of strength identifies cohesion and internal friction as the two principal contributions to the shear strength of a granular material. The contribution of cohesion in over-compacted granular materials has been challenged and replacing cohesion with interlocking has been proposed. A theory of rupture strength that includes interlocking is derived herein. The physics-chemistry concept of critical state is elaborated to accommodate granular materials, based on empirical definitions established in the fields of soil mechanics and bulk solids' flow. A surface in state space, called the critical compaction surface, separates over-compacted states from lightly compacted states. The intersection of this surface with the Mohr-Coulomb envelope forms the critical state surface for a granular material. The rupture strength of an over-compacted granular material is expressed as the sum of cohesion, internal friction and interlocking strength. Interlocking strength is the shear strength contribution due to over-compaction and vanishes at critical state. The theory allows migrations from one critical state to another. Changes in specific volume during such migrations are related to changes in mean-normal effective stress and uncoupled from changes in shearing strain. The theory is reviewed with respect to two established research programs and underlying assumptions are identified.

Parkinson's disease candidate gene prioritization based on expression profile of midbrain dopaminergic neurons

PubMed Central

2010-01-01

Background Parkinson's disease is the second most common neurodegenerative disorder. The pathological hallmark of the disease is degeneration of midbrain dopaminergic neurons. Genetic association studies have linked 13 human chromosomal loci to Parkinson's disease. Identification of gene(s), as part of the etiology of Parkinson's disease, within the large number of genes residing in these loci can be achieved through several approaches, including screening methods, and considering appropriate criteria. Since several of the indentified Parkinson's disease genes are expressed in substantia nigra pars compact of the midbrain, expression within the neurons of this area could be a suitable criterion to limit the number of candidates and identify PD genes. Methods In this work we have used the combination of findings from six rodent transcriptome analysis studies on the gene expression profile of midbrain dopaminergic neurons and the PARK loci in OMIM (Online Mendelian Inheritance in Man) database, to identify new candidate genes for Parkinson's disease. Results Merging the two datasets, we identified 20 genes within PARK loci, 7 of which are located in an orphan Parkinson's disease locus and one, which had been identified as a disease gene. In addition to identifying a set of candidates for further genetic association studies, these results show that the criteria of expression in midbrain dopaminergic neurons may be used to narrow down the number of genes in PARK loci for such studies. PMID:20716345

Quantifying the Effect of DNA Packaging on Gene Expression Level

NASA Astrophysics Data System (ADS)

Kim, Harold

2010-10-01

Gene expression, the process by which the genetic code comes alive in the form of proteins, is one of the most important biological processes in living cells, and begins when transcription factors bind to specific DNA sequences in the promoter region upstream of a gene. The relationship between gene expression output and transcription factor input which is termed the gene regulation function is specific to each promoter, and predicting this gene regulation function from the locations of transcription factor binding sites is one of the challenges in biology. In eukaryotic organisms (for example, animals, plants, fungi etc), DNA is highly compacted into nucleosomes, 147-bp segments of DNA tightly wrapped around histone protein core, and therefore, the accessibility of transcription factor binding sites depends on their locations with respect to nucleosomes - sites inside nucleosomes are less accessible than those outside nucleosomes. To understand how transcription factor binding sites contribute to gene expression in a quantitative manner, we obtain gene regulation functions of promoters with various configurations of transcription factor binding sites by using fluorescent protein reporters to measure transcription factor input and gene expression output in single yeast cells. In this talk, I will show that the affinity of a transcription factor binding site inside and outside the nucleosome controls different aspects of the gene regulation function, and explain this finding based on a mass-action kinetic model that includes competition between nucleosomes and transcription factors.

Classifying and Finding Nearby Compact Stellar Systems

NASA Astrophysics Data System (ADS)

Colebaugh, Alexander; Cunningham, Devin; Dixon, Christopher; Romanowsky, Aaron; Striegel, Stephanie

2018-01-01

Compact stellar systems (CSSs) such as compact ellipticals (cEs) and ultracompact dwarfs (UCDs) are relatively rare and poorly understood types of galaxies. To build a more complete picture of these objects, we create search queries using the Sloan Digital Sky Survey, to inventory CSSs in the nearby universe and to explore their properties. We develop an objective set of criteria for classifying cEs, and use these to construct a large, novel catalog of cEs both during and after formation. We also investigate the numbers of cEs and UCDs around nearby giant galaxies.

Expression of short hairpin RNAs using the compact architecture of retroviral microRNA genes.

PubMed

Burke, James M; Kincaid, Rodney P; Aloisio, Francesca; Welch, Nicole; Sullivan, Christopher S

2017-09-29

Short hairpin RNAs (shRNAs) are effective in generating stable repression of gene expression. RNA polymerase III (RNAP III) type III promoters (U6 or H1) are typically used to drive shRNA expression. While useful for some knockdown applications, the robust expression of U6/H1-driven shRNAs can induce toxicity and generate heterogeneous small RNAs with undesirable off-target effects. Additionally, typical U6/H1 promoters encompass the majority of the ∼270 base pairs (bp) of vector space required for shRNA expression. This can limit the efficacy and/or number of delivery vector options, particularly when delivery of multiple gene/shRNA combinations is required. Here, we develop a compact shRNA (cshRNA) expression system based on retroviral microRNA (miRNA) gene architecture that uses RNAP III type II promoters. We demonstrate that cshRNAs coded from as little as 100 bps of total coding space can precisely generate small interfering RNAs (siRNAs) that are active in the RNA-induced silencing complex (RISC). We provide an algorithm with a user-friendly interface to design cshRNAs for desired target genes. This cshRNA expression system reduces the coding space required for shRNA expression by >2-fold as compared to the typical U6/H1 promoters, which may facilitate therapeutic RNAi applications where delivery vector space is limiting. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

Influence of TP53 and CDH1 genes in hepatocellular cancer spheroid formation and culture: a model system to understand cancer cell growth mechanics.

PubMed

Pomo, Joseph M; Taylor, Robert M; Gullapalli, Rama R

2016-01-01

Spheroid based culture methods are gaining prominence to elucidate the role of the microenvironment in liver carcinogenesis. Additionally, the phenomenon of epithelial-mesenchymal transition also plays an important role in determining the metastatic potential of liver cancer. Tumor spheroids are thus important models to understand the basic biology of liver cancer. We cultured, characterized and examined the formation of compact 3-D micro-tumor spheroids in five hepatocellular carcinoma (HCC) cell lines, each with differing TP53 mutational status (wt vs mutant vs null). Spheroid viability and death was systematically measured over a course of a 10 day growth period using various assays. We also examined the TP53 and E-cadherin (CDH1) mRNA and protein expression status in each cell line of the 2-D and 3-D cell models. A novel finding of our study was the identification of variable 3-D spheroid morphology in individual cell lines, ranging from large and compact, to small and unstable spheroid morphologies. The observed morphological differences between the spheroids were robust and consistent over the duration of spheroid culture growth of 10 days in a repeatable manner. Highly variable CDH1 expression was identified depending on the TP53 mutational status of the individual HCC cell line, which may explain the variable spheroid morphology. We observed consistent patterns of TP53 and CDH1 expression in both 2-D and 3-D culture models. In conclusion, we show that 3-D spheroids are a useful model to determine the morphological growth characteristics of cell lines which are not immediately apparent in routine 2-D culture methods. 3-D culture methods may provide a better alternative to study the process of epithelial-mesenchymal transition (EMT) which is important in the process of liver cancer metastasis.

Compaction of quasi-one-dimensional elastoplastic materials

PubMed Central

Shaebani, M. Reza; Najafi, Javad; Farnudi, Ali; Bonn, Daniel; Habibi, Mehdi

2017-01-01

Insight into crumpling or compaction of one-dimensional objects is important for understanding biopolymer packaging and designing innovative technological devices. By compacting various types of wires in rigid confinements and characterizing the morphology of the resulting crumpled structures, here, we report how friction, plasticity and torsion enhance disorder, leading to a transition from coiled to folded morphologies. In the latter case, where folding dominates the crumpling process, we find that reducing the relative wire thickness counter-intuitively causes the maximum packing density to decrease. The segment size distribution gradually becomes more asymmetric during compaction, reflecting an increase of spatial correlations. We introduce a self-avoiding random walk model and verify that the cumulative injected wire length follows a universal dependence on segment size, allowing for the prediction of the efficiency of compaction as a function of material properties, container size and injection force. PMID:28585550

An interesting case of cryptogenic stroke in a young man due to left ventricular non-compaction: role of cardiac MRI in the accurate diagnosis.

PubMed

Kannan, Arun; Das, Anindita; Janardhanan, Rajesh

2014-06-24

A 28-year-old man arrived for an outpatient cardiac MRI (CMR) study to evaluate cardiac structure. At the age of 24 the patient presented with acute onset expressive aphasia and was diagnosed with ischaemic stroke. Echocardiography at that time was reported as 'apical wall thickening consistent with apical hypertrophic cardiomyopathy'. CMR revealed a moderately dilated left ventricle with abnormal appearance of the left ventricular (LV) apical segments. Further evaluation was consistent with a diagnosis of LV non-compaction (LVNC) cardiomyopathy with a ratio of non-compacted to compacted myocardium measuring 3. There was extensive delayed hyperenhancement signal involving multiple segments representing a significant myocardial scar which is shown to have a prognostic role. Our patient, with no significant cerebrovascular risk factors, would likely have had an embolic stroke. This case demonstrates the role of CMR in accurately diagnosing LVNC in a patient with young stroke where prior echocardiography was non-diagnostic. 2014 BMJ Publishing Group Ltd.

Selective modes determine evolutionary rates, gene compactness and expression patterns in Brassica.

PubMed

Guo, Yue; Liu, Jing; Zhang, Jiefu; Liu, Shengyi; Du, Jianchang

2017-07-01

It has been well documented that most nuclear protein-coding genes in organisms can be classified into two categories: positively selected genes (PSGs) and negatively selected genes (NSGs). The characteristics and evolutionary fates of different types of genes, however, have been poorly understood. In this study, the rates of nonsynonymous substitution (K a ) and the rates of synonymous substitution (K s ) were investigated by comparing the orthologs between the two sequenced Brassica species, Brassica rapa and Brassica oleracea, and the evolutionary rates, gene structures, expression patterns, and codon bias were compared between PSGs and NSGs. The resulting data show that PSGs have higher protein evolutionary rates, lower synonymous substitution rates, shorter gene length, fewer exons, higher functional specificity, lower expression level, higher tissue-specific expression and stronger codon bias than NSGs. Although the quantities and values are different, the relative features of PSGs and NSGs have been largely verified in the model species Arabidopsis. These data suggest that PSGs and NSGs differ not only under selective pressure (K a /K s ), but also in their evolutionary, structural and functional properties, indicating that selective modes may serve as a determinant factor for measuring evolutionary rates, gene compactness and expression patterns in Brassica. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

TGF-β-independent CTGF induction regulates cell adhesion mediated drug resistance by increasing collagen I in HCC.

PubMed

Song, Yeonhwa; Kim, Jin-Sun; Choi, Eun Kyung; Kim, Joon; Kim, Kang Mo; Seo, Haeng Ran

2017-03-28

Hepatocellular carcinoma (HCC) is resistant to conventional chemotherapeutic agents and remains an unmet medical need. Here, we demonstrate a mechanism of cell adhesion-mediated drug resistance using a variety of HCC spheroid models to overcome environment-mediated drug resistance in HCC. We classified spheroids into two groups, tightly compacted and loosely compacted aggregates, based on investigation of dynamics of spheroid formation. Our results show that compactness of HCC spheroids correlated with fibroblast-like characteristics, collagen 1A1 (COL1A1) content, and capacity for chemoresistance. We also showed that ablation of COL1A1 attenuated not only the capacity for compact-spheroid formation, but also chemoresistance. Generally, connective tissue growth factor (CTGF) acts downstream of transforming growth factor (TGF)-β and promotes collagen I fiber deposition in the tumor microenvironment. Importantly, we found that TGF-β-independent CTGF is upregulated and regulates cell adhesion-mediated drug resistance by inducing COL1A1 in tightly compacted HCC spheroids. Furthermore, losartan, which inhibits collagen I synthesis, impaired the compactness of spheroids via disruption of cell-cell contacts and increased the efficacy of anticancer therapeutics in HCC cell line- and HCC patient-derived tumor spheroids. These results strongly suggest functional roles for CTGF-induced collagen I expression in formation of compact spheroids and in evading anticancer therapies in HCC, and suggest that losartan, administered in combination with conventional chemotherapy, might be an effective treatment for liver cancer.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adam, C.; Klimas, P.; Sanchez-Guillen, J.

For the baby Skyrme model with a specific potential, compacton solutions, i.e., configurations with a compact support and parabolic approach to the vacuum, are derived. Specifically, in the nontopological sector, we find spinning Q-balls and Q-shells, as well as peakons. Moreover, we obtain compact baby skyrmions with nontrivial topological charge. All these solutions may form stable multisoliton configurations provided they are sufficiently separated.

Uncovering the identities of compact objects in high-mass X-ray binaries and gamma-ray binaries by astrometric measurements

NASA Astrophysics Data System (ADS)

Yamaguchi, M. S.; Yano, T.; Gouda, N.

2018-03-01

We develop a method for identifying a compact object in binary systems with astrometric measurements and apply it to some binaries. Compact objects in some high-mass X-ray binaries and gamma-ray binaries are unknown, which is responsible for the fact that emission mechanisms in such systems have not yet confirmed. The accurate estimate of the mass of the compact object allows us to identify the compact object in such systems. Astrometric measurements are expected to enable us to estimate the masses of the compact objects in the binary systems via a determination of a binary orbit. We aim to evaluate the possibility of the identification of the compact objects for some binary systems. We then calculate probabilities that the compact object is correctly identified with astrometric observation (= confidence level) by taking into account a dependence of the orbital shape on orbital parameters and distributions of masses of white dwarfs, neutron stars and black holes. We find that the astrometric measurements with the precision of 70 μas for γ Cas allow us to identify the compact object at 99 per cent confidence level if the compact object is a white dwarf with 0.6 M⊙. In addition, we can identify the compact object with the precision of 10 μas at 97 per cent or larger confidence level for LS I +61° 303 and 99 per cent or larger for HESS J0632+057. These results imply that the astrometric measurements with the 10 μas precision level can realize the identification of compact objects for γ Cas, LS I +61° 303, and HESS J0632+057.

Galaxy triplets in Sloan Digital Sky Survey Data Release 7 - II. A connection with compact groups?

NASA Astrophysics Data System (ADS)

Duplancic, Fernanda; O'Mill, Ana Laura; Lambas, Diego G.; Sodré, Laerte; Alonso, Sol

2013-08-01

We analyse a sample of 71 triplets of luminous galaxies derived from the work of O'Mill et al. We compare the properties of triplets and their members with those of control samples of compact groups, the 10 brightest members of rich clusters and galaxies in pairs. The triplets are restricted to have members with spectroscopic redshifts in the range 0.01 ≤ z ≤ 0.14 and absolute r-band luminosities brighter than Mr = -20.5. For these member galaxies, we analyse the stellar mass content, the star formation rates, the Dn(4000) parameter and (Mg - Mr) colour index. Since galaxies in triplets may finally merge in a single system, we analyse different global properties of these systems. We calculate the probability that the properties of galaxies in triplets are strongly correlated. We also study total star formation activity and global colours, and define the triplet compactness as a measure of the percentage of the system total area that is filled by the light of member galaxies. We concentrate in the comparison of our results with those of compact groups to assess how the triplets are a natural extension of these compact systems. Our analysis suggests that triplet galaxy members behave similarly to compact group members and galaxies in rich clusters. We also find that systems comprising three blue, star-forming, young stellar population galaxies (blue triplets) are most probably real systems and not a chance configuration of interloping galaxies. The same holds for triplets composed of three red, non-star-forming galaxies, showing the correlation of galaxy properties in these systems. From the analysis of the triplet as a whole, we conclude that, at a given total stellar mass content, triplets show a total star formation activity and global colours similar to compact groups. However, blue triplets show a high total star formation activity with a lower stellar mass content. From an analysis of the compactness parameter of the systems we find that light is even more concentrated in triplets than in compact groups. We propose that triplets composed of three luminous galaxies, should not be considered as an analogous of galaxy pairs with a third extra member, but rather they are a natural extension of compact groups.

Land-use, transport and population health: estimating the health benefits of compact cities

PubMed Central

Stevenson, Mark; Thompson, Jason; de Sa, Thiago Herick; Ewing, Reid; Mohan, Dinesh; McClure, Rod; Roberts, Ian; Tiwari, Geetam; Giles-Corti, Billie; Sallis, Jim; Sun, Xiaoduan; Wallace, Mark; Woodcock, James

2017-01-01

Using a Health Impact Assessment Framework, we estimated the population health effects arising from alternative land-use and transport policy initiatives in six cities. Land-use changes were modelled to reflect a compact city in which land-use density and diversity were increased and distances to public transport were reduced to produce low motorised mobility, namely a modal shift from private motor vehicles to walking, cycling, and public transport. The modelled compact city scenario resulted in health gains for all cities (for diabetes, cardiovascular disease, and respiratory disease) with the overall health gains ranging from 420 disability-adjusted life years (DALYs) per 100 000 population to 826 DALYs per 100 000 population. However, for moderate to highly motorised cities, such as Melbourne, London, and Boston, the compact city scenario predicted a small increase in road trauma for cyclists and pedestrians (health loss of between 34 to 41 DALYs per 100 000 population). The findings suggest that government policies need to actively pursue land-use elements (particularly a focus towards compact cities) that support a modal shift away from private motor vehicles towards walking, cycling, and low-emission public transport. At the same time, these policies need to ensure the provision of safe walking and cycling infrastructure. The findings highlight the opportunities for policymakers to positively influence the overall health of city populations. PMID:27671671

Models of compacted fine-grained soils used as mineral liner for solid waste

NASA Astrophysics Data System (ADS)

Sivrikaya, Osman

2008-02-01

To prevent the leakage of pollutant liquids into groundwater and sublayers, the compacted fine-grained soils are commonly utilized as mineral liners or a sealing system constructed under municipal solid waste and other containment hazardous materials. This study presents the correlation equations of the compaction parameters required for construction of a mineral liner system. The determination of the characteristic compaction parameters, maximum dry unit weight ( γ dmax) and optimum water content ( w opt) requires considerable time and great effort. In this study, empirical models are described and examined to find which of the index properties correlate well with the compaction characteristics for estimating γ dmax and w opt of fine-grained soils at the standard compactive effort. The compaction data are correlated with different combinations of gravel content ( G), sand content ( S), fine-grained content (FC = clay + silt), plasticity index ( I p), liquid limit ( w L) and plastic limit ( w P) by performing multilinear regression (MLR) analyses. The obtained correlations with statistical parameters are presented and compared with the previous studies. It is found that the maximum dry unit weight and optimum water content have a considerably good correlation with plastic limit in comparison with liquid limit and plasticity index.

Effective data compaction algorithm for vector scan EB writing system

NASA Astrophysics Data System (ADS)

Ueki, Shinichi; Ashida, Isao; Kawahira, Hiroichi

2001-01-01

We have developed a new mask data compaction algorithm dedicated to vector scan electron beam (EB) writing systems for 0.13 μm device generation. Large mask data size has become a significant problem at mask data processing for which data compaction is an important technique. In our new mask data compaction, 'array' representation and 'cell' representation are used. The mask data format for the EB writing system with vector scan supports these representations. The array representation has a pitch and a number of repetitions in both X and Y direction. The cell representation has a definition of figure group and its reference. The new data compaction method has the following three steps. (1) Search arrays of figures by selecting pitches of array so that a number of figures are included. (2) Find out same arrays that have same repetitive pitch and number of figures. (3) Search cells of figures, where the figures in each cell take identical positional relationship. By this new method for the mask data of a 4M-DRAM block gate layer with peripheral circuits, 202 Mbytes without compaction was highly compacted to 6.7 Mbytes in 20 minutes on a 500 MHz PC.

Compact exponential product formulas and operator functional derivative

NASA Astrophysics Data System (ADS)

Suzuki, Masuo

1997-02-01

A new scheme for deriving compact expressions of the logarithm of the exponential product is proposed and it is applied to several exponential product formulas. A generalization of the Dynkin-Specht-Wever (DSW) theorem on free Lie elements is given, and it is used to study the relation between the traditional method (based on the DSW theorem) and the present new scheme. The concept of the operator functional derivative is also proposed, and it is applied to ordered exponentials, such as time-evolution operators for time-dependent Hamiltonians.

Threshold resummation of the rapidity distribution for Higgs production at NNLO +NNLL

NASA Astrophysics Data System (ADS)

Banerjee, Pulak; Das, Goutam; Dhani, Prasanna K.; Ravindran, V.

2018-03-01

We present a formalism that resums threshold-enhanced logarithms to all orders in perturbative QCD for the rapidity distribution of any colorless particle produced in hadron colliders. We achieve this by exploiting the factorization properties and K +G equations satisfied by the soft and virtual parts of the cross section. We compute for the first time compact and most general expressions in two-dimensional Mellin space for the resummed coefficients. Using various state-of-the-art multiloop and multileg results, we demonstrate the numerical impact of our resummed results up to next-to-next-to-leading order for the rapidity distribution of the Higgs boson at the LHC. We find that inclusion of these threshold logs through resummation improves the reliability of perturbative predictions.

An approach for modeling the influence of wheel tractor loads and vibration frequencies on soil compaction

NASA Astrophysics Data System (ADS)

Verotti, M.; Servadio, P.; Belfiore, N. P.; Bergonzoli, S.

2012-04-01

Both soil compaction and ground vibration are forms of environmental degradation that may be understood in the context of the vehicle-soil interaction process considered (Hildebrand et al., 2008). The transit of tractors on agricultural soil is often the main cause of soil compaction increasing. As known, this can be a serious problems for tillage and sowing and therefore the influence of all the affecting factors have been extensively studied in the last decades in order to understand their impact on the biosystem. There are factors related to the climate, namely to the rainfalls and temperature, and many others. Hence, it is not simple to figure out a complete model for predicting an index of compaction, for a given situation. Soil compaction models are important tools for controlling soil compaction due to agricultural field traffic and they are potentially useful technique to provide information concerning correct soil management. By means of such models, strategies and recommendations for prevention of soil compaction may be developed and specific advice may be given to farmers and advisers. In order to predict field wheeled and tracked vehicle performance, some empirical methods, used for off-road vehicle, were applied by Servadio (2010) on agricultural soil. The empirical indexes included, besides the soil strength, the load carried by the tire or track, some technical characteristics of the tire or track of the vehicle (tire or track width, tire or track wheel diameter, unloaded tire section height, number of wheel station in one track, tire deflection, total length of the belt track, the track pitch) as well as the vehicle passes. They have been validated with the tests results of agricultural vehicles over a range of soil in central Italy. Among the parameters which affect soil compaction, the water content of the soil, the axle load and number of vehicle passes proved to be the most important ones. The present paper concerns mainly vehicle-soil-man interaction. In particular, a model based on elasto-visco-plastic concentrated parameters, with multiple degrees of freedom, will be used in order to build a method for detecting a soil damage index, especially expressed in terms of increasing of soil compaction. Besides the axle load, the model will take into account the frequency of the vibrations that the vehicle is transmitting to the soil. Such model expresses a numerical value for the transmissibility coefficient and also allows evaluating the damage at the surface and on the bulk medium where the agricultural crops initially develop. Key words: vehicle-soil interaction, vibration, compaction, models. Acknowledgements This work was carried out under the auspices of the special project "Sceneries of adaptation of the Italian agriculture to the climatic changes" (AGROSCENARI) of the Agricultural Research Council, and Italian Ministry of the Agricultural and Forestry Politics.

Linking initial microstructure and local response during quasistatic granular compaction

DOE PAGES

Hurley, R. C.; Lind, J.; Pagan, D. C.; ...

2017-07-24

In this study, we performed experiments combining three-dimensional x-ray diffraction and x-ray computed tomography to explore the relationship between microstructure and local force and strain during quasistatic granular compaction. We found that initial void space around a grain and contact coordination number before compaction can be used to predict regions vulnerable to above-average local force and strain at later stages of compaction. We also found correlations between void space around a grain and coordination number, and between grain stress and maximum interparticle force, at all stages of compaction. Finally, we observed grains that fracture to have an above-average initial localmore » void space and a below-average initial coordination number. In conclusion, our findings provide (1) a detailed description of microstructure evolution during quasistatic granular compaction, (2) an approach for identifying regions vulnerable to large values of strain and interparticle force, and (3) methods for identifying regions of a material with large interparticle forces and coordination numbers from measurements of grain stress and local porosity.« less

Faint Dwarf Galaxies in Hickson Compact Group 90

NASA Astrophysics Data System (ADS)

Ordenes-Briceño, Y.; Taylor, M. A.; Puzia, T. H.; Muñoz, R. P.

2017-07-01

We report the discovery of a very diverse set of five low-surface brightness (LSB) dwarf galaxy candidates in Hickson Compact Group 90 (HCG 90) detected in deep U- and I-band images obtained with VLT/VIMOS. These are the first LSB dwarf galaxy candidates found in a compact group of galaxies, which share properties with dwarf galaxies found throughout the Local Volume and in nearby galaxy clusters such as Fornax. Among them, we find a pair of candidates with ˜2 kpc projected separation and a nucleated dwarf candidate, with nucleus size of reff≅46-63 pc.

The risk of injury to children in compact pickup trucks.

PubMed

Winston, Flaura K; Durbin, Dennis

2002-01-01

Nearly one million compact pickup trucks were sold last year in the US. Manufacturers now produce extended-cab models of pickups such as the Ford Ranger, Chevrolet S-10, Dodge Dakota, and Toyota Tacoma that can accommodate at least two rear-seated passengers, making them attractive to families with children. However, the safety of these rear seats for children has not been determined. This Issue Brief summarizes a new study that examines and quantifies the risk of injury to children riding in compact pickup trucks. Based on these findings, parents should be advised against using these vehicles as family transportation.

An energy-efficient and compact clustering scheme with temporary support nodes for cognitive radio sensor networks.

PubMed

Salim, Shelly; Moh, Sangman; Choi, Dongmin; Chung, Ilyong

2014-08-11

A cognitive radio sensor network (CRSN) is a wireless sensor network whose sensor nodes are equipped with cognitive radio capability. Clustering is one of the most challenging issues in CRSNs, as all sensor nodes, including the cluster head, have to use the same frequency band in order to form a cluster. However, due to the nature of heterogeneous channels in cognitive radio, it is difficult for sensor nodes to find a cluster head. This paper proposes a novel energy-efficient and compact clustering scheme named clustering with temporary support nodes (CENTRE). CENTRE efficiently achieves a compact cluster formation by adopting two-phase cluster formation with fixed duration. By introducing a novel concept of temporary support nodes to improve the cluster formation, the proposed scheme enables sensor nodes in a network to find a cluster head efficiently. The performance study shows that not only is the clustering process efficient and compact but it also results in remarkable energy savings that prolong the overall network lifetime. In addition, the proposed scheme decreases both the clustering overhead and the average distance between cluster heads and their members.

An Energy-Efficient and Compact Clustering Scheme with Temporary Support Nodes for Cognitive Radio Sensor Networks

PubMed Central

Salim, Shelly; Moh, Sangman; Choi, Dongmin; Chung, Ilyong

2014-01-01

A cognitive radio sensor network (CRSN) is a wireless sensor network whose sensor nodes are equipped with cognitive radio capability. Clustering is one of the most challenging issues in CRSNs, as all sensor nodes, including the cluster head, have to use the same frequency band in order to form a cluster. However, due to the nature of heterogeneous channels in cognitive radio, it is difficult for sensor nodes to find a cluster head. This paper proposes a novel energy-efficient and compact clustering scheme named clustering with temporary support nodes (CENTRE). CENTRE efficiently achieves a compact cluster formation by adopting two-phase cluster formation with fixed duration. By introducing a novel concept of temporary support nodes to improve the cluster formation, the proposed scheme enables sensor nodes in a network to find a cluster head efficiently. The performance study shows that not only is the clustering process efficient and compact but it also results in remarkable energy savings that prolong the overall network lifetime. In addition, the proposed scheme decreases both the clustering overhead and the average distance between cluster heads and their members. PMID:25116905

New Ultra-Compact Dwarf Galaxies in Clusters

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2017-02-01

How do ultra-compact dwarf galaxies (UCDs) galaxies that are especially small and dense form and evolve? Scientists have recently examined distant galaxy clusters, searching for more UCDs to help us answer this question.Origins of DwarfsIn recent years we have discovered a growing sample of small, very dense galaxies. Galaxies that are tens to hundreds of light-years across, with masses between a million and a billion solar masses, fall into category of ultra-compact dwarfs (UCDs).An example of an unresolved compact object from the authors survey that is likely an ultra-compact dwarf galaxy. [Adapted from Zhang Bell 2017]How do these dense and compact galaxies form? Two possibilities are commonly suggested:An initially larger galaxy was tidally stripped during interactions with other galaxies in a cluster, leaving behind only its small, dense core as a UCD.UCDs formed as compact galaxies at very early cosmic times. The ones living in a massive dark matter halo may have been able to remain compact over time, evolving into the objectswe see today.To better understand which of these formation scenarios applies to which galaxies, we need a larger sample size! Our census of UCDs is fairly limited and because theyare small and dim, most of the ones weve discovered are in the nearby universe. To build a good sample, we need to find UCDs at higher redshifts as well.A New SampleIn a recent study, two scientists from University of Michigan have demonstrated how we might find more UCDs. Yuanyuan Zhang (also affiliated with Fermilab) and Eric Bell used the Cluster Lensing and Supernova Survey with Hubble (CLASH) to search 17 galaxy clusters at intermediate redshifts of 0.2 z 0.6, looking for unresolved objects that might be UCDs.The mass and size distributions of the UCD candidates reported in this study, in the context of previously known nuclear star clusters, globular clusters (GCs), UCDs, compact elliptical galaxies (cEs), and dwarf galaxies. [Zhang Bell 2017]Zhang and Bell discovered a sample of compact objects grouped around the central galaxies of the clusters that are consistent with ultra-compact galaxies. The inferred sizes (many around 600 light-years in radius) and masses (roughly one billion solar masses) of these objects suggest that this sample may contain some of the densest UCDs discovered to date.The properties of this new set of UCD candidates arent enough to distinguish between formation scenarios yet, but the authors argue that if we find more such galaxies, we will be able to use the statistics of their spatial and color distributions to determine how they were formed.Zhang and Bell estimate that the 17 CLASH clusters studied in this work each contain an average of 2.7 of these objects in the central million light-years of the cluster. The authors work here suggests that searching wide-field survey data for similar discoveries is a plausible way to increase our sample of UCDs. This will allow us to statistically characterize these dense, compact galaxies and better understand their origins.CitationYuanyuan Zhang and Eric F. Bell 2017 ApJL 835 L2. doi:10.3847/2041-8213/835/1/L2

Simulation of roller compaction with subsequent tableting and characterization of lactose and microcrystalline cellulose.

PubMed

Hein, Stephanie; Picker-Freyer, Katharina M; Langridge, John

2008-01-01

Tablets are by far the most common solid oral dosage forms, and many drugs need to be granulated before they can be tableted. Increasingly roller compaction is being used as a dry granulation technique; however it is a very time and material intensive method. Thus some mini roller compactors and simulations of the roller compaction process have been developed as a means of studying the technique at small scale. An important factor in the selection of materials for roller compaction is their ability to be recompressed into tablets after the initial roller compaction and milling steps. In this paper the roller compaction process was simulated on the basis of some models by Gereg and Cappola (2002) and Zinchuk et al. (2004). An eccentric tableting machine was used to make compacts from alpha-lactose monohydrate, anhydrous beta-lactose, spray-dried lactose and microcrystalline cellulose at different maximum relative densities (rho rel,max 0.6-0.9). These compacts were milled immediately to granules with a rotary granulator. The properties of the granules were analyzed and compared to the properties of the original powders. These granules and powders were then tableted at different maximum relative densities (rho rel,max 0.75-0.95) and their properties including elastic recovery, crushing force and 3D-model were analyzed. The properties of the tablets made from the granules were compared to the properties of the tablets made from the powders to determine which excipients are most suitable for the roller compaction process. The study showed that anhydrous beta-lactose is the preferred form of lactose for use in roller compaction since compaction did not affect tablet crushing force to a large extent. With the simulation of roller compaction process one is able to find qualified materials for use in roller compaction without the necessity of a great deal of material and time.

Enhanced X-ray Emission from Early Universe Analog Galaxies

NASA Astrophysics Data System (ADS)

Brorby, Matthew; Kaaret, Philip; Prestwich, Andrea H.; Mirabel, I. Felix; Feng, Hua

2016-04-01

X-rays from binaries containing compact objects may have played an important role in heating the early Universe. Here we discuss our findings from X-ray studies of blue compact dwarf galaxies (BCDs), Lyman break analogs (LBAs), and Green Pea galaxies (GP), all of which are considered local analogs to high redshift galaxies. We find enhanced X-ray emission per unit star-formation rate which strongly correlates with decreasing metallicity. We find evidence for the existence of a L_X-SFR-Metallicity plane for star-forming galaxies. The exact properties of X-ray emission in the early Universe affects the timing and morphology of reionization, both being observable properties of current and future radio observations of the redshifted 21cm signal from neutral hydrogen.

Physical and mechanical properties of self-compacting concrete containing superplasticizer and metakaolin

NASA Astrophysics Data System (ADS)

Shahidan, Shahiron; Tayeh, Bassam A.; Jamaludin, A. A.; Bahari, N. A. A. S.; Mohd, S. S.; Zuki Ali, N.; Khalid, F. S.

2017-11-01

The development of concrete technology shows a variety of admixtures in concrete to produce special concrete. This includes the production of self-compacting concrete which is able to fill up all spaces, take formwork shapes and pass through congested reinforcement bars without vibrating or needing any external energy. In this study, the main objective is to compare the physical and mechanical properties of self-compacting concrete containing metakaolin with normal concrete. Four types of samples were produced to study the effect of metakaolin towards the physical and mechanical properties of self-compacting concrete where 0%, 5%, 10% and 15% of metakaolin were used as cement replacement. The physical properties were investigated using slump test for normal concrete and slump flow test for self-compacting concrete. The mechanical properties were tested for compressive strength and tensile strength. The findings of this study show that the inclusion of metakaolin as cement replacement can increase both compressive and tensile strength compared to normal concrete. The highest compressive strength was found in self-compacting concrete with 15% metakaolin replacement at 53.3 MPa while self-compacting concrete with 10% metakaolin replacement showed the highest tensile strength at 3.6 MPa. On top of that, the finishing or concrete surface of both cube and cylinder samples made of self-compacting concrete produced a smooth surface with the appearance of less honeycombs compared to normal concrete.

RNA isolation and fractionation with compaction agents

NASA Technical Reports Server (NTRS)

Murphy, J. C.; Fox, G. E.; Willson, R. C.

2001-01-01

A new approach to the isolation of RNA from bacterial lysates employs selective precipitation by compaction agents, such as hexammine cobalt and spermidine. Using 3.5 mM hexammine cobalt, total RNA can be selectively precipitated from a cell lysate. At a concentration of 2 mM hexammine cobalt, rRNA can be fractionated from low molecular weight RNA. The resulting RNA mixture is readily resolved to pure 5S and mixed 16S/23S rRNA by nondenaturing anion-exchange chromatography. Using a second stage of precipitation at 8 mM hexammine cobalt, the low molecular weight RNA fraction can be isolated by precipitation. Compaction precipitation was also applied to the purification of an artificial stable RNA derived from Escherichia coli 5S rRNA and to the isolation of an Escherichia coli-expressed ribozyme. Copyright 2001 Academic Press.

A new exact anisotropic solution of embedding class one

NASA Astrophysics Data System (ADS)

Maurya, S. K.; Gupta, Y. K.; T. T., Smitha; Rahaman, Farook

2016-07-01

We have presented a new anisotropic solution of Einstein's field equations for compact-star models. Einstein's field equations are solved by using the class-one condition (S.N. Pandey, S.P. Sharma, Gen. Relativ. Gravit. 14, 113 (1982)). We constructed the expression for the anisotropy factor ( Δ by using the pressure anisotropy condition and thereafter we obtained the physical parameters like energy density, radial and transverse pressure. These models parameters are well-behaved inside the star and satisfy all the required physical conditions. Also we observed the very interesting result that all physical parameters depend upon the anisotropy factor ( Δ. The mass and radius of the present compact-star models are quite compatible with the observational astrophysical compact stellar objects like Her X-1, RXJ 1856-37, SAX J1808.4-3658(SS1), SAX J1808.4-3658(SS2).

Decoupling of paramagnetic and ferrimagnetic AMS development during the experimental chemical compaction of illite shale powder

NASA Astrophysics Data System (ADS)

Bruijn, Rolf H. C.; Almqvist, Bjarne S. G.; Hirt, Ann M.; Benson, Philip M.

2013-03-01

Inclination shallowing of detrital remanent magnetization in sedimentary strata has solely been constrained for the mechanical processes associated with mud deposition and shallow compaction of clay-rich sediment, even though a significant part of mud diagenesis involves chemical compaction. Here we report, for the first time, on the laboratory simulation of magnetic assemblage development in a chemically compacting illite shale powder of natural origin. The experimental procedure comprised three compaction stages that, when combined, simulate the diagenesis and low-grade metamorphism of illite mud. First, the full extent of load-sensitive mechanical compaction is simulated by room temperature dry axial compression. Subsequently, temperature controlled chemical compaction is initiated by exposing the sample in two stages to amphibolite or granulite facies conditions (temperature is 490 to 750°C and confining pressure is 170 or 300 MPa) both in the absence (confining pressure only) and presence of a deformation stress field (axial compression or confined torsion). Thermodynamic equilibrium in the last two compaction stages was not reached, but illite and mica dehydroxylation initiated, thus providing a wet environment. Magnetic properties were characterized by magnetic susceptibility and its anisotropy (AMS) in both high- and low-applied field. Acquisition of isothermal remanent magnetization (IRM), stepwise three-component thermal de-magnetization of IRM and first-order reversal curves were used to characterize the remanence-bearing minerals. During the chemical compaction experiments ferrimagnetic iron-sulphides formed after reduction of magnetite and detrital pyrite in a low sulphur fugacity environment. The degree of low-field AMS is unaffected by porosity reduction from 15 to ˜1 per cent, regardless of operating conditions and compaction history. High-field paramagnetic AMS increases with compaction for all employed stress regimes and conditions, and is attributed to illite transformation to iron-bearing mica. AMS of authigenic iron-sulphide minerals remained constant during compaction indicating an independence of ferrimagnetic fabric development to chemical compaction in illite shale powder. The decoupling of paramagnetic and ferrimagnetic AMS development during chemical compaction of pelite contrasts with findings from mechanical compaction studies.

How rivers remember: The impacts of prior stress history on grain scale topography and bedload transport

NASA Astrophysics Data System (ADS)

Masteller, C.; Finnegan, N. J.

2016-12-01

Memory is preserved in rivers through the sorting and arrangement of grains on their beds, which reflect previous flow conditions. Manifestations of this phenomenon include observed hysteresis in bedload rating curves (e.g., Moog and Whiting, 1998; Reid et al., 1985) and correlations between the stage at the start of a transport event and the stage at the end of transport during a previous event (Turowski et al., 2011). This observed history dependence represents a key difficulty in the accurate prediction of bedload transport rates. To begin to systematically explore these memory effects on fluvial bedload transport, we experimentally examined how a gravel bed river responds to variations in prior stress history. Specifically, we compare the response of the grain-scale topography of a gravel riverbed to both below and above threshold flow conditions. We find that under low flow, when no sediment transport occurs, the bed compacts as the highest protruding grains pivot into low elevation pockets. This reorganization appears to occur logarithmically with low flow duration, making it analogous to compaction observed in dry granular flows subjected to agitation. The amount of prior compaction affects bedload transport rates at the onset of above threshold flow, with more compact beds yielding less bedload flux. In contrast, we find that under sediment-transporting flows, the bed dilates because grains are re-deposited in relatively precarious positions. During the same applied transport flow, we observe that the most pronounced dilation occurs when the initial bed is the most compact, suggesting that the potential for dilation is related to the degree of previous compaction. These observations highlight that a gravel bed experiences two different behaviors, compaction under low shear stresses, and dilation under high, sediment transporting, shear stresses. This observation is consistent with previous studies on the compaction and dilation of granular media, as well as flume experiments conducted using glass beads. Further, this study highlights the varying response of grain-scale topography and bedload transport rates to prior flow and bed conditions, demonstrating history dependence in fluvial systems.

Unfolding of globular polymers by external force

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bell, Samuel; Terentjev, Eugene M., E-mail: emt1000@cam.ac.uk

2015-11-14

We examine the problem of a polymer chain, folded into a globule in poor solvent, subjected to a constant tensile force. Such a situation represents a Gibbs thermodynamic ensemble and is useful for analysing force-clamp atomic force microscopy measurements, now very common in molecular biophysics. Using a basic Flory mean-field theory, we account for surface interactions of monomers with solvent. Under an increasing tensile force, a first-order phase transition occurs from a compact globule to a fully extended chain, in an “all-or-nothing” unfolding event. This contrasts with the regime of imposed extension, first studied by Halperin and Zhulina [Europhys. Lett.more » 15, 417 (1991)], where there is a regime of coexistence of a partial globule with an extended chain segment. We relate the transition forces in this problem to the solvent quality and degree of polymerisation, and also find analytical expressions for the energy barriers present in the problem. Using these expressions, we analyse the kinetic problem of a force-ramp experiment and show that the force at which a globule ruptures depends on the rate of loading.« less

Connecting the molecular scale to the continuum scale for diffusion processes in smectite-rich porous media.

PubMed

Bourg, Ian C; Sposito, Garrison

2010-03-15

In this paper, we address the manner in which the continuum-scale diffusive properties of smectite-rich porous media arise from their molecular- and pore-scale features. Our starting point is a successful model of the continuum-scale apparent diffusion coefficient for water tracers and cations, which decomposes it as a sum of pore-scale terms describing diffusion in macropore and interlayer "compartments." We then apply molecular dynamics (MD) simulations to determine molecular-scale diffusion coefficients D(interlayer) of water tracers and representative cations (Na(+), Cs(+), Sr(2+)) in Na-smectite interlayers. We find that a remarkably simple expression relates D(interlayer) to the pore-scale parameter δ(nanopore) ≤ 1, a constrictivity factor that accounts for the lower mobility in interlayers as compared to macropores: δ(nanopore) = D(interlayer)/D(0), where D(0) is the diffusion coefficient in bulk liquid water. Using this scaling expression, we can accurately predict the apparent diffusion coefficients of tracers H(2)0, Na(+), Sr(2+), and Cs(+) in compacted Na-smectite-rich materials.

Antarctic Firn Compaction Rates from Repeat-Track Airborne Radar Data: I. Methods

NASA Technical Reports Server (NTRS)

Medley, B.; Ligtenberg, S. R. M.; Joughin, I.; Van Den Broeke, M. R.; Gogineni, S.; Nowicki, S.

2015-01-01

While measurements of ice-sheet surface elevation change are increasingly used to assess mass change, the processes that control the elevation fluctuations not related to ice-flow dynamics (e.g. firn compaction and accumulation) remain difficult to measure. Here we use radar data from the Thwaites Glacier (West Antarctica) catchment to measure the rate of thickness change between horizons of constant age over different time intervals: 2009-10, 2010-11 and 2009-11. The average compaction rate to approximately 25m depth is 0.33ma(exp -1), with largest compaction rates near the surface. Our measurements indicate that the accumulation rate controls much of the spatio-temporal variations in the compaction rate while the role of temperature is unclear due to a lack of measurements. Based on a semi-empirical, steady-state densification model, we find that surveying older firn horizons minimizes the potential bias resulting from the variable depth of the constant age horizon. Our results suggest that the spatiotemporal variations in the firn compaction rate are an important consideration when converting surface elevation change to ice mass change. Compaction rates varied by up to 0.12ma(exp -1) over distances less than 6km and were on average greater than 20% larger during the 2010-11 interval than during 2009-10.

Transcriptome dynamics along axolotl regenerative development are consistent with an extensive reduction in gene expression heterogeneity in dedifferentiated cells

PubMed Central

2017-01-01

Although in recent years the study of gene expression variation in the absence of genetic or environmental cues or gene expression heterogeneity has intensified considerably, many basic and applied biological fields still remain unaware of how useful the study of gene expression heterogeneity patterns might be for the characterization of biological systems and/or processes. Largely based on the modulator effect chromatin compaction has for gene expression heterogeneity and the extensive changes in chromatin compaction known to occur for specialized cells that are naturally or artificially induced to revert to less specialized states or dedifferentiate, I recently hypothesized that processes that concur with cell dedifferentiation would show an extensive reduction in gene expression heterogeneity. The confirmation of the existence of such trend could be of wide interest because of the biomedical and biotechnological relevance of cell dedifferentiation-based processes, i.e., regenerative development, cancer, human induced pluripotent stem cells, or plant somatic embryogenesis. Here, I report the first empirical evidence consistent with the existence of an extensive reduction in gene expression heterogeneity for processes that concur with cell dedifferentiation by analyzing transcriptome dynamics along forearm regenerative development in Ambystoma mexicanum or axolotl. Also, I briefly discuss on the utility of the study of gene expression heterogeneity dynamics might have for the characterization of cell dedifferentiation-based processes, and the engineering of tools that afforded better monitoring and modulating such processes. Finally, I reflect on how a transitional reduction in gene expression heterogeneity for dedifferentiated cells can promote a long-term increase in phenotypic heterogeneity following cell dedifferentiation with potential adverse effects for biomedical and biotechnological applications. PMID:29134148

Double coverings with h 2 , 0 = 0 over compact Kähler manifolds

NASA Astrophysics Data System (ADS)

Lee, Nam-Hoon

2018-04-01

We give a formula for Hodge numbers of double coverings with h 2 , 0 = 0 over compact Kähler manifolds. As an application, we consider Calabi-Yau double coverings and calculate their Hodge numbers. In this way, we find several pairs (h 1 , 1 ,h 1 , 2) of Hodge numbers of Calabi-Yau threefolds that do not come from toric setting.

Examining the Role of Environment in a Comprehensive Sample of Compact Groups

NASA Astrophysics Data System (ADS)

Walker, Lisa May; Johnson, Kelsey E.; Gallagher, Sarah C.; Charlton, Jane C.; Hornschemeier, Ann E.; Hibbard, John E.

2012-03-01

Compact groups, with their high number densities, small velocity dispersions, and an interstellar medium that has not been fully processed, provide a local analog to conditions of galaxy interactions in the earlier universe. The frequent and prolonged gravitational encounters that occur in compact groups affect the evolution of the constituent galaxies in a myriad of ways, for example, gas processing and star formation. Recently, a statistically significant "gap" has been discovered in the mid-infrared (MIR: 3.6-8 μm) IRAC color space of compact group galaxies. This gap is not seen in field samples and is a new example of how the compact group environment may affect the evolution of member galaxies. In order to investigate the origin and nature of this gap, we have compiled a larger sample of 37 compact groups in addition to the original 12 groups studied by Johnson et al. (yielding 174 individual galaxies with reliable MIR photometry). We find that a statistically significant deficit of galaxies in this gap region of IRAC color space is persistent in the full sample, lending support to the hypothesis that the compact group environment inhibits moderate specific star formation rates. Using this expanded sample, we have more fully characterized the distribution of galaxies in this color space and quantified the low-density region more fully with respect to MIR bluer and MIR redder colors. We note a curvature in the color-space distribution, which is fully consistent with increasing dust temperature as the activity in a galaxy increases. This full sample of 49 compact groups allows us to subdivide the data according to physical properties of the groups. An analysis of these subsamples indicates that neither projected physical diameter nor density shows a trend in color space within the values represented by this sample. We hypothesize that the apparent lack of a trend is due to the relatively small range of properties in this sample, whose groups have already been pre-selected to be compact and dense. Thus, the relative influence of stochastic effects (such as the particular distribution and amount of star formation in individual galaxies) becomes dominant. We analyze spectral energy distributions of member galaxies as a function of their location in color space and find that galaxies in different regions of MIR color space contain dust with varying temperatures and/or polycyclic aromatic hydrocarbon emission.

Examining the Role of Environment in a Comprehensive Sample of Compact Groups

NASA Technical Reports Server (NTRS)

Walker, Lisa May; Johnson, Kelsey E.; Gallagher, Sarah C.; Charlton, Jane C.; Hornschemeier, Ann E.; Hibbard, John E.

2012-01-01

Compact groups, with their high number densities, small velocity dispersions, and an interstellar medium that has not been fully processed, provide a local analog to conditions of galaxy interactions in the earlier universe. The frequent and prolonged gravitational encounters that occur in compact groups affect the evolution of the constituent galaxies in a myriad of ways, for example, gas processing and star formation. Recently, a statistically significant "gap" has been discovered in the mid-infrared (MIR: 3.6-8 µm) IRAC color space of compact group galaxies. This gap is not seen in field samples and is a new example of how the compact group environment may affect the evolution of member galaxies. In order to investigate the origin and nature of this gap, we have compiled a larger sample of 37 compact groups in addition to the original 12 groups studied by Johnson et al. (yielding 174 individual galaxies with reliable MIR photometry). We find that a statistically significant deficit of galaxies in this gap region of IRAC color space is persistent in the full sample, lending support to the hypothesis that the compact group environment inhibits moderate specific star formation rates. Using this expanded sample, we have more fully characterized the distribution of galaxies in this color space and quantified the low-density region more fully with respect to MIR bluer and MIR redder colors. We note a curvature in the color-space distribution, which is fully consistent with increasing dust temperature as the activity in a galaxy increases. This full sample of 49 compact groups allows us to subdivide the data according to physical properties of the groups. An analysis of these subsamples indicates that neither projected physical diameter nor density shows a trend in color space within the values represented by this sample. We hypothesize that the apparent lack of a trend is due to the relatively small range of properties in this sample, whose groups have already been pre-selected to be compact and dense. Thus, the relative influence of stochastic effects (such as the particular distribution and amount of star formation in individual galaxies) becomes dominant. We analyze spectral energy distributions of member galaxies as a function of their location in color space and find that galaxies in different regions of MIR color space contain dust with varying temperatures and/or polycyclic aromatic hydrocarbon emission.

Grow-ING, Age-ING and Die-ING: ING proteins link cancer, senescence and apoptosis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Michael; Berardi, Philip; Gong Wei

The INhibitor of Growth (ING) family of plant homeodomain (PHD) proteins induce apoptosis and regulate gene expression through stress-inducible binding of phospholipids with subsequent nuclear and nucleolar localization. Relocalization occurs concomitantly with interaction with a subset of nuclear proteins, including PCNA, p53 and several regulators of acetylation such as the p300/CBP and PCAF histone acetyltransferases (HATs), as well as the histone deacetylases HDAC1 and hSir2. These interactions alter the localized state of chromatin compaction, subsequently affecting the expression of subsets of genes, including those associated with the stress response (Hsp70), apoptosis (Bax, MDM2) and cell cycle regulation (p21{sup WAF1}, cyclinmore » B) in a cell- and tissue-specific manner. The expression levels and subcellular localization of ING proteins are altered in a significant number of human cancer types, while the expression of ING isoforms changes during cellular aging, suggesting that ING proteins may play a role in linking cellular transformation and replicative senescence. The variety of functions attributed to ING proteins suggest that this tumor suppressor serves to link the disparate processes of cell cycle regulation, cell suicide and cellular aging through epigenetic regulation of gene expression. This review examines recent findings in the ING field with a focus on the functions of protein-protein interactions involving ING family members and the mechanisms by which these interactions facilitate the various roles that ING proteins play in tumorigenesis, apoptosis and senescence.« less

The inhibition of 45A ncRNA expression reduces tumor formation, affecting tumor nodules compactness and metastatic potential in neuroblastoma cells

PubMed Central

Russo, Debora; Poggi, Alessandro; Villa, Federico; Brizzolara, Antonella; Canale, Claudio; Mescola, Andrea; Daga, Antonio; Russo, Claudio; Nizzari, Mario; Florio, Tullio; Menichini, Paola; Pagano, Aldo

2017-01-01

We recently reported the in vitro over-expression of 45A, a RNA polymerase III-transcribed non-coding (nc)RNA, that perturbs the intracellular content of FE65L1 affecting cell proliferation rate, short-term response to genotoxic stress, substrate adhesion capacity and, ultimately, increasing the tumorigenic potential of human neuroblastoma cells. In this work, to deeply explore the mechanism by which 45A ncRNA contributes to cancer development, we targeted in vitro and in vivo 45A levels by the stable overexpression of antisense 45A RNA. 45A downregulation leads to deep modifications of cytoskeleton organization, adhesion and migration of neuroblastoma cells. These effects are correlated with alterations in the expression of several genes including GTSE1 (G2 and S phase-expressed-1), a crucial regulator of tumor cell migration and metastatic potential. Interestingly, the downregulation of 45A ncRNA strongly affects the in vivo tumorigenic potential of SKNBE2 neuroblastoma cells, increasing tumor nodule compactness and reducing GTSE1 protein expression in a subcutaneous neuroblastoma mouse model. Moreover, intracardiac injection of neuroblastoma cells showed that downregulation of 45A ncRNA also influences tumor metastatic ability. In conclusion, our data highlight a key role of 45A ncRNA in cancer development and suggest that its modulation might represent a possible novel anticancer therapeutic approach. PMID:28029658

The inhibition of 45A ncRNA expression reduces tumor formation, affecting tumor nodules compactness and metastatic potential in neuroblastoma cells.

PubMed

Penna, Ilaria; Gigoni, Arianna; Costa, Delfina; Vella, Serena; Russo, Debora; Poggi, Alessandro; Villa, Federico; Brizzolara, Antonella; Canale, Claudio; Mescola, Andrea; Daga, Antonio; Russo, Claudio; Nizzari, Mario; Florio, Tullio; Menichini, Paola; Pagano, Aldo

2017-01-31

We recently reported the in vitro over-expression of 45A, a RNA polymerase III-transcribed non-coding (nc)RNA, that perturbs the intracellular content of FE65L1 affecting cell proliferation rate, short-term response to genotoxic stress, substrate adhesion capacity and, ultimately, increasing the tumorigenic potential of human neuroblastoma cells. In this work, to deeply explore the mechanism by which 45A ncRNA contributes to cancer development, we targeted in vitro and in vivo 45A levels by the stable overexpression of antisense 45A RNA.45A downregulation leads to deep modifications of cytoskeleton organization, adhesion and migration of neuroblastoma cells. These effects are correlated with alterations in the expression of several genes including GTSE1 (G2 and S phase-expressed-1), a crucial regulator of tumor cell migration and metastatic potential. Interestingly, the downregulation of 45A ncRNA strongly affects the in vivo tumorigenic potential of SKNBE2 neuroblastoma cells, increasing tumor nodule compactness and reducing GTSE1 protein expression in a subcutaneous neuroblastoma mouse model. Moreover, intracardiac injection of neuroblastoma cells showed that downregulation of 45A ncRNA also influences tumor metastatic ability. In conclusion, our data highlight a key role of 45A ncRNA in cancer development and suggest that its modulation might represent a possible novel anticancer therapeutic approach.

A conformally flat realistic anisotropic model for a compact star

NASA Astrophysics Data System (ADS)

Ivanov, B. V.

2018-04-01

A physically realistic stellar model with a simple expression for the energy density and conformally flat interior is found. The relations between the different conditions are used without graphic proofs. It may represent a real pulsar.

Dyadosphere bending of light

NASA Astrophysics Data System (ADS)

De Lorenci, V. A.; Figueiredo, N.; Fliche, H. H.; Novello, M.

2001-04-01

In the context of the static and spherically symmetric solution of a charged compact object, we present the expression for the bending of light in the region just outside the event horizon - the dyadosphere - where vacuum polarization effects are taken into account.

Compact exponential product formulas and operator functional derivative

DOE Office of Scientific and Technical Information (OSTI.GOV)

Suzuki, M.

1997-02-01

A new scheme for deriving compact expressions of the logarithm of the exponential product is proposed and it is applied to several exponential product formulas. A generalization of the Dynkin{endash}Specht{endash}Wever (DSW) theorem on free Lie elements is given, and it is used to study the relation between the traditional method (based on the DSW theorem) and the present new scheme. The concept of the operator functional derivative is also proposed, and it is applied to ordered exponentials, such as time-evolution operators for time-dependent Hamiltonians. {copyright} {ital 1997 American Institute of Physics.}

Emergent Self-Organized Criticality in Gene Expression Dynamics: Temporal Development of Global Phase Transition Revealed in a Cancer Cell Line

PubMed Central

Tsuchiya, Masa; Giuliani, Alessandro; Hashimoto, Midori; Erenpreisa, Jekaterina; Yoshikawa, Kenichi

2015-01-01

Background The underlying mechanism of dynamic control of the genome-wide expression is a fundamental issue in bioscience. We addressed it in terms of phase transition by a systemic approach based on both density analysis and characteristics of temporal fluctuation for the time-course mRNA expression in differentiating MCF-7 breast cancer cells. Methodology In a recent work, we suggested criticality as an essential aspect of dynamic control of genome-wide gene expression. Criticality was evident by a unimodal-bimodal transition through flattened unimodal expression profile. The flatness on the transition suggests the existence of a critical transition at which up- and down-regulated expression is balanced. Mean field (averaging) behavior of mRNAs based on the temporal expression changes reveals a sandpile type of transition in the flattened profile. Furthermore, around the transition, a self-similar unimodal-bimodal transition of the whole expression occurs in the density profile of an ensemble of mRNA expression. These singular and scaling behaviors identify the transition as the expression phase transition driven by self-organized criticality (SOC). Principal Findings Emergent properties of SOC through a mean field approach are revealed: i) SOC, as a form of genomic phase transition, consolidates distinct critical states of expression, ii) Coupling of coherent stochastic oscillations between critical states on different time-scales gives rise to SOC, and iii) Specific gene clusters (barcode genes) ranging in size from kbp to Mbp reveal similar SOC to genome-wide mRNA expression and ON-OFF synchronization to critical states. This suggests that the cooperative gene regulation of topological genome sub-units is mediated by the coherent phase transitions of megadomain-scaled conformations between compact and swollen chromatin states. Conclusion and Significance In summary, our study provides not only a systemic method to demonstrate SOC in whole-genome expression, but also introduces novel, physically grounded concepts for a breakthrough in the study of biological regulation. PMID:26067993

spadetail-dependent cell compaction of the dorsal zebrafish blastula.

PubMed

Warga, R M; Nüsslein-volhard, C

1998-11-01

The dorsal marginal zone of the zebrafish blastula, equivalent to the amphibian Spemann organizer, is destined to become the tissues of the notochord and prechordal plate. Preceding gastrulation in the zebrafish, we find that these future mesendodermal cells acquire a cohesive cell behavior characterized by flattening and maximization of intercellular contacts, somewhat resembling cell compaction in mouse blastocysts. This behavior may suppress cell intermingling. Surprisingly, this blastula cell compaction requires normal function of spadetail, a gene known to be necessary for the dorsal convergent cell movement of paraxial mesoderm later in the gastrula. We propose that spadetail-dependent cell compaction subtly controls the early mixing and dispersal of dorsal cells that coalesce into the prospective organizer region. This early process may be necessary for the correct location of the boundary separating axial and paraxial cells. Copyright 1998 Academic Press.

Compaction behaviour and mechanical strength of lactose-sodium starch glycolate and lactose-croscarmellose sodium binary tablets

NASA Astrophysics Data System (ADS)

Ashikin Yaakub, Nur; Shamsul Anuar, Mohd; Tahir, Suraya Mohd

2018-04-01

The focus of this study is to elucidate the effects of adding super disintegrants (SSG and Acdisol) to a filler (lactose) in terms of the compaction behaviour and mechanical strength of the formed binary tablets. The tablets were formed in a uniaxial die compaction process with compaction pressures ranging from 37.7MPa to 150.7 MPa. Consequently, the findings indicated that the increasing of the compaction pressure and the percentage mass composition of the super disintegrants would led to the increased in the strength of the tablets as well as their plastic energies, where this was more apparent for the case of the binary lactose/Acdisol tablets. In addition, as the compaction pressure increased, the maximum ejection pressure required to eject the tablet from the die cavity also increased. In contrast, a decreased in the maximum ejection pressure was observed as the composition of both super disintegrants increased in the lactose-super disintegrant binary tablets. In conclusion, the addition of super disintegrant; SSG with lactose and Acdisol with lactose; would enhanced the mechanical strength of lactose based tablets especially for the case of acdisol-lactose binary tablets in the experimental conditions adopted in this current work.

Impact of extracellularity on the evolutionary rate of mammalian proteins.

PubMed

Liao, Ben-Yang; Weng, Meng-Pin; Zhang, Jianzhi

2010-01-06

It is of fundamental importance to understand the determinants of the rate of protein evolution. Eukaryotic extracellular proteins are known to evolve faster than intracellular proteins. Although this rate difference appears to be due to the lower essentiality of extracellular proteins than intracellular proteins in yeast, we here show that, in mammals, the impact of extracellularity is independent from the impact of gene essentiality. Our partial correlation analysis indicated that the impact of extracellularity on mammalian protein evolutionary rate is also independent from those of tissue-specificity, expression level, gene compactness, and the number of protein-protein interactions and, surprisingly, is the strongest among all the factors we examined. Similar results were also found from principal component regression analysis. Our findings suggest that different rules govern the pace of protein sequence evolution in mammals and yeasts.

Gene delivery to mitotic and postmitotic photoreceptors via compacted DNA nanoparticles results in improved phenotype in a mouse model of retinitis pigmentosa.

PubMed

Cai, Xue; Conley, Shannon M; Nash, Zack; Fliesler, Steven J; Cooper, Mark J; Naash, Muna I

2010-04-01

The purpose of the present study was to test the therapeutic efficiency and safety of compacted-DNA nanoparticle-mediated gene delivery into the subretinal space of a juvenile mouse model of retinitis pigmentosa. Nanoparticles containing the mouse opsin promoter and wild-type mouse Rds gene were injected subretinally into mice carrying a haploinsufficiency mutation in the retinal degeneration slow (rds(+ or -)) gene at postnatal day (P)5 and 22. Control mice were either injected with saline, injected with uncompacted naked plasmid DNA carrying the Rds gene, or remained untreated. Rds mRNA levels peaked at postinjection day 2 to 7 (PI-2 to PI-7) for P5 injections, stabilized at levels 2-fold higher than in uninjected controls for both P5 and P22 injections, and remained elevated at the latest time point examined (PI-120). Rod function (measured by electroretinography) showed modest but statistically significant improvement compared with controls after both P5 and P22 injections. Cone function in nanoparticle-injected eyes reached wild-type levels for both ages of injections, indicating full prevention of cone degeneration. Ultrastructural examination at PI-120 revealed significant improvement in outer segment structures in P5 nanoparticle-injected eyes, while P22 injection had a modest structural improvement. There was no evidence of macrophage activation or induction of IL-6 or TNF-alpha mRNA in P5 or P22 nanoparticle-dosed eyes at either PI-2 or PI-30. Thus, compacted-DNA nanoparticles can efficiently and safely drive gene expression in both mitotic and postmitotic photoreceptors and retard degeneration in this model. These findings, using a clinically relevant treatment paradigm, illustrate the potential for application of nanoparticle-based gene replacement therapy for treatment of human retinal degenerations.-Cai, X., Conley, S. M., Nash, Z., Fliesler, S. J., Cooper, M. J., Naash, M. I. Gene delivery to mitotic and postmitotic photoreceptors via compacted DNA nanoparticles results in improved phenotype in a mouse model of retinitis pigmentosa.

Relativistic model for anisotropic strange stars

NASA Astrophysics Data System (ADS)

Deb, Debabrata; Chowdhury, Sourav Roy; Ray, Saibal; Rahaman, Farook; Guha, B. K.

2017-12-01

In this article, we attempt to find a singularity free solution of Einstein's field equations for compact stellar objects, precisely strange (quark) stars, considering Schwarzschild metric as the exterior spacetime. To this end, we consider that the stellar object is spherically symmetric, static and anisotropic in nature and follows the density profile given by Mak and Harko (2002) , which satisfies all the physical conditions. To investigate different properties of the ultra-dense strange stars we have employed the MIT bag model for the quark matter. Our investigation displays an interesting feature that the anisotropy of compact stars increases with the radial coordinate and attains its maximum value at the surface which seems an inherent property for the singularity free anisotropic compact stellar objects. In this connection we also perform several tests for physical features of the proposed model and show that these are reasonably acceptable within certain range. Further, we find that the model is consistent with the energy conditions and the compact stellar structure is stable with the validity of the TOV equation and Herrera cracking concept. For the masses below the maximum mass point in mass vs radius curve the typical behavior achieved within the framework of general relativity. We have calculated the maximum mass and radius of the strange stars for the three finite values of bag constant Bg.

Tidal deformations of compact stars with crystalline quark matter

NASA Astrophysics Data System (ADS)

Lau, S. Y.; Leung, P. T.; Lin, L.-M.

2017-05-01

We study the tidal deformability of bare quark stars and hybrid compact stars composed of a quark-matter core in general relativity, assuming that the deconfined quark matter exists in a crystalline color superconducting phase. We find that taking the elastic property of crystalline quark matter into account in the calculation of the tidal deformability can break the universal I-Love relation discovered for fluid compact stars, which connects the moment of inertia and tidal deformability. Our result suggests that measurements of the moment of inertia and tidal deformability can in principle be used to test the existence of solid quark stars, despite our ignorance of the high-density equation of state. Assuming that the moment of inertia can be measured to 10% level, one can then distinguish a 1.4 (1 ) M⊙ solid quark star described by our quark-matter equation of state model with a gap parameter Δ =25 MeV from a fluid compact star if the tidal deformability can be measured to about 10% (45%) level. On the other hand, we find that the nuclear matter fluid envelope of a hybrid star can screen out the effect of the solid core significantly so that the resulting I-Love relation for hybrid stars still agrees with the universal relation for fluid stars to about 1% level.

Compaction and gas loss in welded pyroclastic deposits as revealed by porosity, permeability, and electrical conductivity measurements of the Shevlin Park Tuff

USGS Publications Warehouse

Wright, Heather M.; Cashman, Katharine V.

2014-01-01

Pyroclastic flows produced by large volcanic eruptions commonly densify after emplacement. Processes of gas escape, compaction, and welding in pyroclastic-flow deposits are controlled by the physical and thermal properties of constituent material. Through measurements of matrix porosity, permeability, and electrical conductivity, we provide a framework for understanding the evolution of pore structure during these processes. Using data from the Shevlin Park Tuff in central Oregon, United States, and from the literature, we find that over a porosity range of 0%–70%, matrix permeability varies by almost 10 orders of magnitude (from 10–20 to 10–11 m2), with over three orders of magnitude variation at any given porosity. Part of the variation at a given porosity is due to permeability anisotropy, where oriented core samples indicate higher permeabilities parallel to foliation (horizontally) than perpendicular to foliation (vertically). This suggests that pore space is flattened during compaction, creating anisotropic crack-like networks, a geometry that is supported by electrical conductivity measurements. We find that the power law equation: k1 = 1.3 × 10–21 × ϕ5.2 provides the best approximation of dominant horizontal gas loss, where k1 = permeability, and ϕ = porosity. Application of Kozeny-Carman fluid-flow approximations suggests that permeability in the Shevlin Park Tuff is controlled by crack- or disk-like pore apertures with minimum widths of 0.3 and 7.5 μm. We find that matrix permeability limits compaction over short times, but deformation is then controlled by competition among cooling, compaction, water resorption, and permeable gas escape. These competing processes control the potential for development of overpressure (and secondary explosions) and the degree of welding in the deposit, processes that are applicable to viscous densification of volcanic deposits in general. Further, the general relationships among porosity, permeability, and pore geometry are relevant for flow of any fluid through an ignimbritic host.

How serious a problem is subsoil compaction in the Netherlands? A survey based on probability sampling

NASA Astrophysics Data System (ADS)

Brus, Dick J.; van den Akker, Jan J. H.

2018-02-01

Although soil compaction is widely recognized as a soil threat to soil resources, reliable estimates of the acreage of overcompacted soil and of the level of soil compaction parameters are not available. In the Netherlands data on subsoil compaction were collected at 128 locations selected by stratified random sampling. A map showing the risk of subsoil compaction in five classes was used for stratification. Measurements of bulk density, porosity, clay content and organic matter content were used to compute the relative bulk density and relative porosity, both expressed as a fraction of a threshold value. A subsoil was classified as overcompacted if either the relative bulk density exceeded 1 or the relative porosity was below 1. The sample data were used to estimate the means of the two subsoil compaction parameters and the overcompacted areal fraction. The estimated global means of relative bulk density and relative porosity were 0.946 and 1.090, respectively. The estimated areal fraction of the Netherlands with overcompacted subsoils was 43 %. The estimates per risk map unit showed two groups of map units: a low-risk group (units 1 and 2, covering only 4.6 % of the total area) and a high-risk group (units 3, 4 and 5). The estimated areal fraction of overcompacted subsoil was 0 % in the low-risk unit and 47 % in the high-risk unit. The map contains no information about where overcompacted subsoils occur. This was caused by the poor association of the risk map units 3, 4 and 5 with the subsoil compaction parameters and subsoil overcompaction. This can be explained by the lack of time for recuperation.

Interplanetary Scintillation studies with the Murchison Wide-field Array III: Comparison of source counts and densities for radio sources and their sub-arcsecond components at 162 MHz

NASA Astrophysics Data System (ADS)

Chhetri, R.; Ekers, R. D.; Morgan, J.; Macquart, J.-P.; Franzen, T. M. O.

2018-06-01

We use Murchison Widefield Array observations of interplanetary scintillation (IPS) to determine the source counts of point (<0.3 arcsecond extent) sources and of all sources with some subarcsecond structure, at 162 MHz. We have developed the methodology to derive these counts directly from the IPS observables, while taking into account changes in sensitivity across the survey area. The counts of sources with compact structure follow the behaviour of the dominant source population above ˜3 Jy but below this they show Euclidean behaviour. We compare our counts to those predicted by simulations and find a good agreement for our counts of sources with compact structure, but significant disagreement for point source counts. Using low radio frequency SEDs from the GLEAM survey, we classify point sources as Compact Steep-Spectrum (CSS), flat spectrum, or peaked. If we consider the CSS sources to be the more evolved counterparts of the peaked sources, the two categories combined comprise approximately 80% of the point source population. We calculate densities of potential calibrators brighter than 0.4 Jy at low frequencies and find 0.2 sources per square degrees for point sources, rising to 0.7 sources per square degree if sources with more complex arcsecond structure are included. We extrapolate to estimate 4.6 sources per square degrees at 0.04 Jy. We find that a peaked spectrum is an excellent predictor for compactness at low frequencies, increasing the number of good calibrators by a factor of three compared to the usual flat spectrum criterion.

Compaction and sedimentary basin analysis on Mars

NASA Astrophysics Data System (ADS)

Gabasova, Leila R.; Kite, Edwin S.

2018-03-01

Many of the sedimentary basins of Mars show patterns of faults and off-horizontal layers that, if correctly understood, could serve as a key to basin history. Sediment compaction is a possible cause of these patterns. We quantified the possible role of differential sediment compaction for two Martian sedimentary basins: the sediment fill of Gunjur crater (which shows concentric graben), and the sediment fill of Gale crater (which shows outward-dipping layers). We assume that basement topography for these craters is similar to the present-day topography of complex craters that lack sediment infill. For Gunjur, we find that differential compaction produces maximum strains consistent with the locations of observed graben. For Gale, we were able to approximately reproduce the observed layer orientations measured from orbiter image-based digital terrain models, but only with a >3 km-thick donut-shaped past overburden. It is not immediately obvious what geologic processes could produce this shape.

Dynamics of Galaxies in Compact Groups II.

NASA Astrophysics Data System (ADS)

Amram, P.; Mendes de Oliveira, C.

We show partial results of a program based on Fabry-Perot Hα velocity field data of compact groups taken at the ESO and the CFH 3.6m telescopes in order to analyze the kinematics of compact group galaxies. This project has three main goals: 1. determine the evolutionary stages of the groups; 2. search for tidal dwarf galaxies and 3. determine the Tully-Fisher relation for the group galaxies. We classify the compact groups studied so far into the following subclasses : (1) merging groups, (2) strongly interacting, (3) mildly interacting, (4) kinematically undisturbed and (5) false groups/single galaxy (details are given in the companion paper Mendes de Oliveira and Amram, 2000). We present examples of velocity fields of galaxies in compact groups that are in different evolutionary stages as classified from the kinematic disturbances. Spiral-only groups have often been considered chance alignments or groups in the very early stages of dynamical evolution. However, we find that the kinematics of the member galaxies for spiral-only groups in classes (1), (2) and (3) above display peculiarities which suggest that the galaxies know of the presence of their neighbors.

Changes in Chromatin Compaction During the Cell Cycle Revealed by Micrometer-Scale Measurement of Molecular Flow in the Nucleus

PubMed Central

Hinde, Elizabeth; Cardarelli, Francesco; Digman, Michelle A.; Gratton, Enrico

2012-01-01

We present a quantitative fluctuation-based assay to measure the degree of local chromatin compaction and investigate how chromatin density regulates the diffusive path adopted by an inert protein in dividing cells. The assay uses CHO-K1 cells coexpressing untagged enhanced green fluorescent protein (EGFP) and histone H2B tagged mCherry. We measure at the single-cell level the EGFP localization and molecular flow patterns characteristic of each stage of chromatin compaction from mitosis through interphase by means of pair-correlation analysis. We find that the naturally occurring changes in chromatin organization impart a regulation on the spatial distribution and temporal dynamics of EGFP within the nucleus. Combined with the analysis of Ca2+ intracellular homeostasis during cell division, EGFP flow regulation can be interpreted as the result of controlled changes in chromatin compaction. For the first time, to our knowledge, we were able to probe chromatin compaction on the micrometer scale, where the regulation of molecular diffusion may become relevant for many cellular processes. PMID:22325293

Compact localized states and flat bands from local symmetry partitioning

NASA Astrophysics Data System (ADS)

Röntgen, M.; Morfonios, C. V.; Schmelcher, P.

2018-01-01

We propose a framework for the connection between local symmetries of discrete Hamiltonians and the design of compact localized states. Such compact localized states are used for the creation of tunable, local symmetry-induced bound states in an energy continuum and flat energy bands for periodically repeated local symmetries in one- and two-dimensional lattices. The framework is based on very recent theorems in graph theory which are here employed to obtain a block partitioning of the Hamiltonian induced by the symmetry of a given system under local site permutations. The diagonalization of the Hamiltonian is thereby reduced to finding the eigenspectra of smaller matrices, with eigenvectors automatically divided into compact localized and extended states. We distinguish between local symmetry operations which commute with the Hamiltonian, and those which do not commute due to an asymmetric coupling to the surrounding sites. While valuable as a computational tool for versatile discrete systems with locally symmetric structures, the approach provides in particular a unified, intuitive, and efficient route to the flexible design of compact localized states at desired energies.

Comparing Low-Redshift Compact Dwarf Starbursts in the RESOLVE Survey with High-Redshift Blue Nuggets

NASA Astrophysics Data System (ADS)

Palumbo, Michael Louis; Kannappan, Sheila; Snyder, Elaine; Eckert, Kathleen; Norman, Dara; Fraga, Luciano; Quint, Bruno; Amram, Philippe; Mendes de Oliveira, Claudia; RESOLVE Team

2018-01-01

We identify and characterize a population of compact dwarf starburst galaxies in the RESOLVE survey, a volume-limited census of galaxies in the local universe, to probe the possibility that these galaxies are related to “blue nuggets,” a class of intensely star-forming and compact galaxies previously identified at high redshift. Blue nuggets are thought to form as the result of intense compaction events that drive fresh gas to their centers. They are expected to display prolate morphology and rotation along their minor axes. We report IFU observations of three of our compact dwarf starburst galaxies, from which we construct high-resolution velocity fields, examining the evidence for minor axis or otherwise misaligned rotation. We find multiple cases of double nuclei in our sample, which may be indicative of a merger origin as in some blue nugget formation scenarios. We compare the masses, radii, gas-to-stellar mass ratios, star formation rates, stellar surface mass densities, and environmental contexts of our sample to expectations for blue nuggets.

Sediment compaction in deepwater basin of the South China Sea: estimation from ODP 184 and IODP 349 drilling well data.

NASA Astrophysics Data System (ADS)

Tuoyu, W.; Xie, Y.

2017-12-01

Abnormal compaction in deepwater basins not only cause serious soft sediment deformation, but also significantly affect the safety of the drilling campaign. Therefore, study the compaction condition in the sediments would be an important task in the deepwater basin and associate with the environment variation. We analyze the drilling data from the ODP Leg 184 Site 1144, 1146, 1148 and the IODP Leg 349 Site U1431, U1432, U1433, U1435 to study the sediment compaction and controls in the northern South China Sea. We have found the sedimentation rate, sediment content, distribution area and buried depth control the sediment compaction in deepwater basin of the South China Sea. Among all the factors, the sediment content is the most important factor. The fitted normal compacted coefficients and the mudline porosity for interval 50 m shows disciplinary variation versus depth. The pore pressure predicted from different fitted results shows different overpressure situation. The normal compaction trend from Site 1144 reflects the porosity variation trend in stable deposition basins in the northern South China Sea. The predicted pore pressure shows overpressure at Site 1144, which is attributed to compaction disequilibrium. Nevertheless, the mixed lithology column may influence the predicted overpressure at Site 1148, which is responsible for the confusing result. Above all. we find that sediment compaction should be act as a proxy for pore pressure in the deepwater basin of the South China Sea. The study will help us to nature of sedimentation in the deepwater basin set up and can be used as analog for older sediments deposited in the similar kind of depositional environment in deepwater basin of the South China Sea.

A method to design blended rolled edges for compact range reflectors

NASA Technical Reports Server (NTRS)

Gupta, Inder J.; Burnside, Walter D.

1989-01-01

A method to design blended rolled edges for arbitrary rim shape compact range reflectors is presented. The reflectors may be center-fed or offset-fed. The method leads to rolled edges with minimal surface discontinuities. It is shown that the reflectors designed using the prescribed method can be defined analytically using simple expressions. A procedure to obtain optimum rolled edges parameter is also presented. The procedure leads to blended rolled edges that minimize the diffracted fields emanating from the junction between the paraboloid and the rolled edge surface while satisfying certain constraints regarding the reflector size and the minimum operating frequency of the system.

A method to design blended rolled edges for compact range reflectors

NASA Technical Reports Server (NTRS)

Gupta, Inder J.; Ericksen, Kurt P.; Burnside, Walter D.

1990-01-01

A method to design blended rolled edges for arbitrary rim shape compact range reflectors is presented. The reflectors may be center-fed or offset-fed. The method leads to rolled edges with minimal surface discontinuities. It is shown that the reflectors designed using the prescribed method can be defined analytically using simple expressions. A procedure to obtain optimum rolled edges parameters is also presented. The procedure leads to blended rolled edges that minimize the diffracted fields emanating from the junction between the paraboloid and the rolled edge surface while satisfying certain constraints regarding the reflector size and the minimum operating frequency of the system.

I-Love-Q relations: from compact stars to black holes

NASA Astrophysics Data System (ADS)

Yagi, Kent; Yunes, Nicolás

2016-05-01

The relations between most observables associated with a compact star, such as the mass and radius of a neutron star or a quark star, typically depend strongly on their unknown internal structure. The recently discovered I-Love-Q relations (between the moment of inertia, the tidal deformability and the quadrupole moment) are however approximately insensitive to this structure. These relations become exact for stationary black holes (BHs) in General Relativity as shown by the no-hair theorems, mainly because BHs are vacuum solutions with event horizons. In this paper, we take the first steps toward studying how the approximate I-Love-Q relations become exact in the limit as compact stars become BHs. To do so, we consider a toy model for compact stars, i.e. incompressible stars with anisotropic pressure, which allows us to model an equilibrium sequence of stars with ever increasing compactness that approaches the BH limit arbitrarily closely. We numerically construct such a sequence in the slow-rotation and in the small-tide approximations by extending the Hartle-Thorne formalism, and then extract the I-Love-Q trio from the asymptotic behavior of the metric tensor at spatial infinity. We find that the I-Love-Q relations approach the BH limit in a nontrivial way, with the quadrupole moment and the tidal deformability changing sign as the compactness and the amount of anisotropy are increased. Through a generalization of Maclaurin spheroids to anisotropic stars, we show that the multipole moments also change sign in the Newtonian limit as the amount of anisotropy is increased because the star becomes prolate. We also prove analytically that the stellar moment of inertia reaches the BH limit as the compactness reaches a critical BH value in the strongly anisotropic limit. Modeling the BH limit through a sequence of anisotropic stars, however, can fail when considering other theories of gravity. We calculate the scalar dipole charge and the moment of inertia in a particular parity-violating modified theory and find that these quantities do not tend to their BH counterparts as the anisotropic stellar sequence approaches the BH limit.

Anticrack inclusion model for compaction bands in sandstone

NASA Astrophysics Data System (ADS)

Sternlof, Kurt R.; Rudnicki, John W.; Pollard, David D.

2005-11-01

Detailed observations of compaction bands exposed in the Aztec Sandstone of southeastern Nevada indicate that these thin, tabular, bounded features of localized porosity loss initiated at pervasive grain-scale flaws, which collapsed in response to compressive tectonic loading. From many of these Griffith-type flaws, an apparently self-sustaining progression of collapse propagated outward to form bands of compacted grains a few centimeters thick and tens of meters in planar extent. These compaction bands can be idealized as highly eccentric ellipsoidal bodies that have accommodated uniform uniaxial plastic strain parallel to their short dimension within a surrounding elastic material. They thus can be represented mechanically as contractile Eshelby inclusions, which generate near-tip compressive stress concentrations consistent with self-sustaining, in-plane propagation. The combination of extreme aspect ratio (˜10-4) and significant uniaxial plastic strain (˜10%) also justifies an approximation of the bands as anticracks: sharp boundaries across which a continuous distribution of closing mode displacement discontinuity has been accommodated. This anticrack interpretation of compaction bands is analogous to that of pressure solution surfaces, except that porosity loss takes the place of material dissolution. We find that displacement discontinuity boundary element modeling of compaction bands as anticracks within a two-dimensional linear elastic continuum can accurately represent the perturbed external stress fields they induce.

Transition operators

NASA Astrophysics Data System (ADS)

Alcock-Zeilinger, J.; Weigert, H.

2017-05-01

In this paper, we give a generic algorithm of the transition operators between Hermitian Young projection operators corresponding to equivalent irreducible representations of 𝖲𝖴 (N ) , using the compact expressions of Hermitian Young projection operators derived in the work of Alcock-Zeilinger and Weigert [eprint arXiv:1610.10088 [math-ph

Formation of compact myelin is required for maturation of the axonal cytoskeleton

NASA Technical Reports Server (NTRS)

Brady, S. T.; Witt, A. S.; Kirkpatrick, L. L.; de Waegh, S. M.; Readhead, C.; Tu, P. H.; Lee, V. M.

1999-01-01

Although traditional roles ascribed to myelinating glial cells are structural and supportive, the importance of compact myelin for proper functioning of the nervous system can be inferred from mutations in myelin proteins and neuropathologies associated with loss of myelin. Myelinating Schwann cells are known to affect local properties of peripheral axons (de Waegh et al., 1992), but little is known about effects of oligodendrocytes on CNS axons. The shiverer mutant mouse has a deletion in the myelin basic protein gene that eliminates compact myelin in the CNS. In shiverer mice, both local axonal features like phosphorylation of cytoskeletal proteins and neuronal perikaryon functions like cytoskeletal gene expression are altered. This leads to changes in the organization and composition of the axonal cytoskeleton in shiverer unmyelinated axons relative to age-matched wild-type myelinated fibers, although connectivity and patterns of neuronal activity are comparable. Remarkably, transgenic shiverer mice with thin myelin sheaths display an intermediate phenotype indicating that CNS neurons are sensitive to myelin sheath thickness. These results indicate that formation of a normal compact myelin sheath is required for normal maturation of the neuronal cytoskeleton in large CNS neurons.

Isolation and Characterisation of Mesenchymal Stem Cells from Rat Bone Marrow and the Endosteal Niche: A Comparative Study

PubMed Central

Yusop, Norhayati; Battersby, Paul; Alraies, Amr; Moseley, Ryan

2018-01-01

Within bone, mesenchymal stromal cells (MSCs) exist within the bone marrow stroma (BM-MSC) and the endosteal niche, as cells lining compact bone (CB-MSCs). This study isolated and characterised heterogeneous MSC populations from each niche and subsequently investigated the effects of extensive cell expansion, analysing population doublings (PDs)/cellular senescence, colony-forming efficiencies (CFEs), MSC cell marker expression, and osteogenic/adipogenic differentiation. CB-MSCs and BM-MSCs demonstrated similar morphologies and PDs, reaching 100 PDs. Both populations exhibited consistent telomere lengths (12–17 kb), minimal senescence, and positive telomerase expression. CB-MSCs (PD15) had significantly lower CFEs than PD50. CB-MSCs and BM-MSCs both expressed MSC (CD73/CD90/CD105); embryonic (Nanog) and osteogenic markers (Runx2, osteocalcin) but no hematopoietic markers (CD45). CB-MSCs (PD15) strongly expressed Oct4 and p16INK4A. At early PDs, CB-MSCs possessed a strong osteogenic potency and low potency for adipogenesis, whilst BM-MSCs possessed greater overall bipotentiality for osteogenesis and adipogenesis. At PD50, CB-MSCs demonstrated reduced potency for both osteogenesis and adipogenesis, compared to BM-MSCs at equivalent PDs. This study demonstrates similarities in proliferative and mesenchymal cell characteristics between CB-MSCs and BM-MSCs, but contrasting multipotentiality. Such findings support further comparisons of human CB-MSCs and BM-MSCs, facilitating selection of optimal MSC populations for regenerative medicine purposes. PMID:29765418

Anatomy, histology and elemental profile of long bones and ribs of the Asian elephant (Elephas maximus).

PubMed

Nganvongpanit, Korakot; Siengdee, Puntita; Buddhachat, Kittisak; Brown, Janine L; Klinhom, Sarisa; Pitakarnnop, Tanita; Angkawanish, Taweepoke; Thitaram, Chatchote

2017-09-01

This study evaluated the morphology and elemental composition of Asian elephant (Elephas maximus) bones (humerus, radius, ulna, femur, tibia, fibula and rib). Computerized tomography was used to image the intraosseous structure, compact bones were processed using histological techniques, and elemental profiling of compact bone was conducted using X-ray fluorescence. There was no clear evidence of an open marrow cavity in any of the bones; rather, dense trabecular bone was found in the bone interior. Compact bone contained double osteons in the radius, tibia and fibula. The osteon structure was comparatively large and similar in all bones, although the lacuna area was greater (P < 0.05) in the femur and ulna. Another finding was that nutrient foramina were clearly present in the humerus, ulna, femur, tibia and rib. Twenty elements were identified in elephant compact bone. Of these, ten differed significantly across the seven bones: Ca, Ti, V, Mn, Fe, Zr, Ag, Cd, Sn and Sb. Of particular interest was the finding of a significantly larger proportion of Fe in the humerus, radius, fibula and ribs, all bones without an open medullary cavity, which is traditionally associated with bone marrow for blood cell production. In conclusion, elephant bones present special characteristics, some of which may be important to hematopoiesis and bone strength for supporting a heavy body weight.

Von Willebrand Factor Deposition and ADAMTS-13 Consumption in Allograft Tissue of Thrombotic Microangiopathy-like Disorder After Living Donor Liver Transplantation: A Case Report.

PubMed

Nakanuma, S; Miyashita, T; Hayashi, H; Ohbatake, Y; Takamura, H; Okazaki, M; Yamaguchi, T; Sakai, S; Makino, I; Oyama, K; Tajima, H; Ninomiya, I; Fushida, S; Ohta, T

2017-09-01

Thrombotic microangiopathy (TMA) pathogenesis after living donor liver transplantation (LDLT) is thought to be caused by release of unusually large von Willebrand factor multimers (UL-vWFMs) resulting from sinusoidal endothelial cell damage and induction of platelet adhesion and aggregation. A decrease in a disintegrin-like and metalloproteinase with thrombospondin type 1 motifs-13 (ADAMTS-13) that cleave UL-vWFMs might cause excessive UL-vWFMs activity and result in platelet thrombus formation. However, this phenomenon has not undergone a full pathologic assessment. A 60-year-old man was diagnosed with hepatitis C-related end-stage cirrhosis. His son was the donor, and he underwent LDLT. On postoperative day 44, his laboratory findings met most TMA diagnostic criteria, and he was diagnosed with TMA-like disorder (TMALD). Localization of CD42b as a platelet marker, vWF, and ADAMTS-13 in allograft tissue of this patient were evaluated using immunohistochemistry. CD42b expression was observed as platelet aggregates attached to hepatocytes or within the hepatocyte cytoplasm, a morphology called extravasated platelet aggregation (EPA). vWF expression was observed mainly as deposited compact clusters, and ADAMTS-13 expression resembled distinct dots throughout the liver tissue. These findings suggest that EPA indicated sinusoidal endothelial cell damage followed by detachment, and vWF deposition resulted from UL-vWFM oversynthesis. ADAMTS-13 might be consumed in the allograft tissue to cleave UL-vWFMs, but ADAMTS-13 levels might be insufficient to cleave all the deposited UL-vWFMs. We present the case of an LDLT recipient diagnosed with TMALD using blood tests, which showed the presence of TMA pathogenesis in the allograft. Copyright © 2017 Elsevier Inc. All rights reserved.

Overpressure generation by load transfer following shale framework weakening due to smectite diagenesis

USGS Publications Warehouse

Lahann, R.W.; Swarbrick, R.E.

2011-01-01

Basin model studies which have addressed the importance of smectite conversion to illite as a source of overpressure in the Gulf of Mexico have principally relied on a single-shale compaction model and treated the smectite reaction as only a fluid-source term. Recent fluid pressure interpretation and shale petrology studies indicate that conversion of bound water to mobile water, dissolution of load-bearing grains, and increased preferred orientation change the compaction properties of the shale. This results in substantial changes in effective stress and fluid pressure. The resulting fluid pressure can be 1500-3000psi higher than pressures interpreted from models based on shallow compaction trends. Shale diagenesis changes the mineralogy, volume, and orientation of the load-bearing grains in the shale as well as the volume of bound water. This process creates a weaker (more compactable) grain framework. When these changes occur without fluid export from the shale, some of the stress is transferred from the grains onto the fluid. Observed relationships between shale density and calculated effective stress in Gulf of Mexico shelf wells confirm these changes in shale properties with depth. Further, the density-effective stress changes cannot be explained by fluid-expansion or fluid-source processes or by prediagenesis compaction, but are consistent with a dynamic diagenetic modification of the shale mineralogy, texture, and compaction properties during burial. These findings support the incorporation of diagenetic modification of compaction properties as part of the fluid pressure interpretation process. ?? 2011 Blackwell Publishing Ltd.

Sediment compaction and pore pressure prediction in deepwater basin of the South China Sea: Estimation from ODP and IODP drilling well data

NASA Astrophysics Data System (ADS)

Xie, Yangbing; Wu, Tuoyu; Sun, Jin; Zhang, Hanyu; Wang, Jiliang; Gao, Jinwei; Chen, Chuanxu

2018-02-01

Overpressure in deepwater basins not only causes serious soft sediment deformation, but also significantly affects the safety of drilling operations. Therefore, prediction of overpressure in sediments has become an important task in deepwater oil exploration and development. In this study, we analyze the drilling data from ODP Leg 184 Sites 1144, 1146, and 1148, and IODP Leg 349 Sites U1431, U1432, U1433, and U1435 to study the sediment compaction and controls in the northern South China Sea. Sedimentation rate, sediment content, distribution area, and buried depth are the factors that influence sediment compaction in the deepwater basin of the South China Sea. Among these factors, the sediment content is the most important. The fitted normal compacted coefficients and mudline porosity for an interval of 50 m shows disciplinary variation versus depth. The pore pressure predicted from different fitted results shows varying overpressure situations. The normal compaction trend from Site 1144 reflects the porosity variation trend in stable deposition basins in the northern South China Sea. The predicted pore pressure shows overpressure at Site 1144, which is attributed to compaction disequilibrium. Nevertheless, the mixed lithology column may influence the predicted over-pressure at Site 1148, which is responsible for the confusing result. Above all, we find that sediment compaction should serve as a proxy for pore pressure in the deepwater basin of the South China Sea.

Investigating Compaction by Intergranular Pressure Solution Using the Discrete Element Method

NASA Astrophysics Data System (ADS)

van den Ende, M. P. A.; Marketos, G.; Niemeijer, A. R.; Spiers, C. J.

2018-01-01

Intergranular pressure solution creep is an important deformation mechanism in the Earth's crust. The phenomenon has been frequently studied and several analytical models have been proposed that describe its constitutive behavior. These models require assumptions regarding the geometry of the aggregate and the grain size distribution in order to solve for the contact stresses and often neglect shear tractions. Furthermore, analytical models tend to overestimate experimental compaction rates at low porosities, an observation for which the underlying mechanisms remain to be elucidated. Here we present a conceptually simple, 3-D discrete element method (DEM) approach for simulating intergranular pressure solution creep that explicitly models individual grains, relaxing many of the assumptions that are required by analytical models. The DEM model is validated against experiments by direct comparison of macroscopic sample compaction rates. Furthermore, the sensitivity of the overall DEM compaction rate to the grain size and applied stress is tested. The effects of the interparticle friction and of a distributed grain size on macroscopic strain rates are subsequently investigated. Overall, we find that the DEM model is capable of reproducing realistic compaction behavior, and that the strain rates produced by the model are in good agreement with uniaxial compaction experiments. Characteristic features, such as the dependence of the strain rate on grain size and applied stress, as predicted by analytical models, are also observed in the simulations. DEM results show that interparticle friction and a distributed grain size affect the compaction rates by less than half an order of magnitude.

Embryo as an active granular fluid: stress-coordinated cellular constriction chains

NASA Astrophysics Data System (ADS)

Holcomb, Michael; Gao, Guo-Jie; Thomas, Jeffrey; Blawzdziewicz, Jerzy

2016-11-01

Mechanical stress plays an intricate role in gene expression in individual cells and sculpting of developing tissues. Motivated by our observation of the cellular constriction chains (CCCs) during the initial phase of ventral furrow formation in the Drosophila melanogaster embryo, we propose an active granular fluid (AGF) model that provides valuable insights into cellular coordination in the apical constriction process. In our model, cells are treated as circular particles connected by a predefined force network, and they undergo a random constriction process in which the particle constriction probability P is a function of the stress exerted on the particle by its neighbors. We find that when P favors tensile stress, constricted particles tend to form chain-like structures. In contrast, constricted particles tend to form compact clusters when P favors compression. A remarkable similarity of constricted-particle chains and CCCs observed in vivo provides indirect evidence that tensile-stress feedback coordinates the apical constriction activity.

The structure of an RNAi polymerase links RNA silencing and transcription.

PubMed

Salgado, Paula S; Koivunen, Minni R L; Makeyev, Eugene V; Bamford, Dennis H; Stuart, David I; Grimes, Jonathan M

2006-12-01

RNA silencing refers to a group of RNA-induced gene-silencing mechanisms that developed early in the eukaryotic lineage, probably for defence against pathogens and regulation of gene expression. In plants, protozoa, fungi, and nematodes, but apparently not insects and vertebrates, it involves a cell-encoded RNA-dependent RNA polymerase (cRdRP) that produces double-stranded RNA triggers from aberrant single-stranded RNA. We report the 2.3-A resolution crystal structure of QDE-1, a cRdRP from Neurospora crassa, and find that it forms a relatively compact dimeric molecule, each subunit of which comprises several domains with, at its core, a catalytic apparatus and protein fold strikingly similar to the catalytic core of the DNA-dependent RNA polymerases responsible for transcription. This evolutionary link between the two enzyme types suggests that aspects of RNA silencing in some organisms may recapitulate transcription/replication pathways functioning in the ancient RNA-based world.

Electron Waiting Times in Mesoscopic Conductors

NASA Astrophysics Data System (ADS)

Albert, Mathias; Haack, Géraldine; Flindt, Christian; Büttiker, Markus

2012-05-01

Electron transport in mesoscopic conductors has traditionally involved investigations of the mean current and the fluctuations of the current. A complementary view on charge transport is provided by the distribution of waiting times between charge carriers, but a proper theoretical framework for coherent electronic systems has so far been lacking. Here we develop a quantum theory of electron waiting times in mesoscopic conductors expressed by a compact determinant formula. We illustrate our methodology by calculating the waiting time distribution for a quantum point contact and find a crossover from Wigner-Dyson statistics at full transmission to Poisson statistics close to pinch-off. Even when the low-frequency transport is noiseless, the electrons are not equally spaced in time due to their inherent wave nature. We discuss the implications for renewal theory in mesoscopic systems and point out several analogies with level spacing statistics and random matrix theory.

Expression transmission using exaggerated animation for Elfoid

PubMed Central

Hori, Maiya; Tsuruda, Yu; Yoshimura, Hiroki; Iwai, Yoshio

2015-01-01

We propose an expression transmission system using a cellular-phone-type teleoperated robot called Elfoid. Elfoid has a soft exterior that provides the look and feel of human skin, and is designed to transmit the speaker's presence to their communication partner using a camera and microphone. To transmit the speaker's presence, Elfoid sends not only the voice of the speaker but also the facial expression captured by the camera. In this research, facial expressions are recognized using a machine learning technique. Elfoid cannot, however, display facial expressions because of its compactness and a lack of sufficiently small actuator motors. To overcome this problem, facial expressions are displayed using Elfoid's head-mounted mobile projector. In an experiment, we built a prototype system and experimentally evaluated it's subjective usability. PMID:26347686

Membrane Reflector Vertical Cavity Lasers at Near- and Midwave-Infrared

DTIC Science & Technology

2014-05-30

independent broadband reflectors based on cross-stacked gratings, Optics Express, (04 2011): 9050. doi: 10.1364/OE.19.009050 Tapas Kumar Saha, Mingyu Lu... Mingyu Lu, Huiqing Zhai, Deyin Zhao, Weidong Zhou. Design of a compact grating coupler with controllable linewidths via transverse resonance and

Scalar field configurations supported by charged compact reflecting stars in a curved spacetime

NASA Astrophysics Data System (ADS)

Peng, Yan

2018-05-01

We study the system of static scalar fields coupled to charged compact reflecting stars through both analytical and numerical methods. We enclose the star in a box and our solutions are related to cases without box boundaries when putting the box far away from the star. We provide bottom and upper bounds for the radius of the scalar hairy compact reflecting star. We obtain numerical scalar hairy star solutions satisfying boundary conditions and find that the radius of the hairy star in a box is continuous in a range, which is very different from cases without box boundaries where the radius is discrete in the range. We also examine effects of the star charge and mass on the largest radius.

Influence of Organic Amendment and Compaction on Nutrient Dynamics in a Saturated Saline-Sodic Soil from the Riparian Zone.

PubMed

Miller, J J; Bremer, E; Curtis, T

2016-07-01

Cattle grazing in wet riparian pastures may influence nutrient dynamics due to nutrient deposition in feces and urine, soil compaction, and vegetation loss. We conducted a lab incubation study with a saline-sodic riparian soil to study nutrient (N, P, S, Fe, Mn, Cu, and Zn) dynamics in soil pore water using Plant Root Simulator (PRS) probes and release of nutrients into the overlying ponded water during flooding. The treatment factors were organic amendment (manure, roots, and unamended control), compaction (compacted, uncompacted), and burial time (3, 7, and 14 d). Amendment treatment had the greatest impact on nutrient dynamics, followed by burial time, whereas compaction had little impact. The findings generally supported our hypothesis that organic amendments should first increase nitrate loss, then increase Mn mobility, then Fe mobility and associated release of P, and finally increase sulfate loss. Declines in nitrate due to amendment addition were small because nitrate was at low levels in all treatments due to high denitrification potential instead of being released to soil pore water or overlying water. Addition of organic amendment strongly increased Mn and Fe concentrations in overlying water and of adsorbed Fe on PRS probes but only increased Mn on PRS probes on Day 3 due to subsequent displacement from ion exchange membranes. Transport of P to overlying water was increased by organic amendment addition but less so for manure than roots despite higher P on PRS probes. The findings showed that saline-sodic soils in riparian zones are generally a nutrient source for P and are a nutrient sink for N as measured using PRS probes after 3 to 7 d of flooding. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Candidate high-z protoclusters among the Planck compact sources, as revealed by Herschel-SPIRE

NASA Astrophysics Data System (ADS)

Greenslade, J.; Clements, D. L.; Cheng, T.; De Zotti, G.; Scott, D.; Valiante, E.; Eales, S.; Bremer, M. N.; Dannerbauer, H.; Birkinshaw, M.; Farrah, D.; Harrison, D. L.; Michałowski, M. J.; Valtchanov, I.; Oteo, I.; Baes, M.; Cooray, A.; Negrello, M.; Wang, L.; van der Werf, P.; Dunne, L.; Dye, S.

2018-05-01

By determining the nature of all the Planck compact sources within 808.4 deg2 of large Herschel surveys, we have identified 27 candidate protoclusters of dusty star-forming galaxies (DSFGs) that are at least 3σ overdense in either 250, 350, or 500 μm sources. We find roughly half of all the Planck compact sources are resolved by Herschel into multiple discrete objects, with the other half remaining unresolved by Herschel. We find a significant difference between versions of the Planck catalogues, with earlier releases hosting a larger fraction of candidate protoclusters and Galactic cirrus than later releases, which we ascribe to a difference in the filters used in the creation of the three catalogues. We find a surface density of DSFG candidate protoclusters of (3.3 ± 0.7) × 10-2 sources deg-2, in good agreement with previous similar studies. We find that a Planck colour selection of S857/S545 < 2 works well to select candidate protoclusters, but can miss protoclusters at z < 2. The Herschel colours of individual candidate protocluster members indicate our candidate protoclusters all likely all lie at z > 1. Our candidate protoclusters are a factor of 5 times brighter at 353 GHz than expected from simulations, even in the most conservative estimates. Further observations are needed to confirm whether these candidate protoclusters are physical clusters, multiple protoclusters along the line of sight, or chance alignments of unassociated sources.

Live phylogeny with polytomies: Finding the most compact parsimonious trees.

PubMed

Papamichail, D; Huang, A; Kennedy, E; Ott, J-L; Miller, A; Papamichail, G

2017-08-01

Construction of phylogenetic trees has traditionally focused on binary trees where all species appear on leaves, a problem for which numerous efficient solutions have been developed. Certain application domains though, such as viral evolution and transmission, paleontology, linguistics, and phylogenetic stemmatics, often require phylogeny inference that involves placing input species on ancestral tree nodes (live phylogeny), and polytomies. These requirements, despite their prevalence, lead to computationally harder algorithmic solutions and have been sparsely examined in the literature to date. In this article we prove some unique properties of most parsimonious live phylogenetic trees with polytomies, and their mapping to traditional binary phylogenetic trees. We show that our problem reduces to finding the most compact parsimonious tree for n species, and describe a novel efficient algorithm to find such trees without resorting to exhaustive enumeration of all possible tree topologies. Copyright © 2017 Elsevier Ltd. All rights reserved.

Alterations of the cytoskeleton in human cells in space proved by life-cell imaging.

PubMed

Corydon, Thomas J; Kopp, Sascha; Wehland, Markus; Braun, Markus; Schütte, Andreas; Mayer, Tobias; Hülsing, Thomas; Oltmann, Hergen; Schmitz, Burkhard; Hemmersbach, Ruth; Grimm, Daniela

2016-01-28

Microgravity induces changes in the cytoskeleton. This might have an impact on cells and organs of humans in space. Unfortunately, studies of cytoskeletal changes in microgravity reported so far are obligatorily based on the analysis of fixed cells exposed to microgravity during a parabolic flight campaign (PFC). This study focuses on the development of a compact fluorescence microscope (FLUMIAS) for fast live-cell imaging under real microgravity. It demonstrates the application of the instrument for on-board analysis of cytoskeletal changes in FTC-133 cancer cells expressing the Lifeact-GFP marker protein for the visualization of F-actin during the 24(th) DLR PFC and TEXUS 52 rocket mission. Although vibration is an inevitable part of parabolic flight maneuvers, we successfully for the first time report life-cell cytoskeleton imaging during microgravity, and gene expression analysis after the 31(st) parabola showing a clear up-regulation of cytoskeletal genes. Notably, during the rocket flight the FLUMIAS microscope reveals significant alterations of the cytoskeleton related to microgravity. Our findings clearly demonstrate the applicability of the FLUMIAS microscope for life-cell imaging during microgravity, rendering it an important technological advance in live-cell imaging when dissecting protein localization.

Evaluation of the hormonal state of columnar apple trees (Malus x domestica) based on high throughput gene expression studies.

PubMed

Krost, Clemens; Petersen, Romina; Lokan, Stefanie; Brauksiepe, Bastienne; Braun, Peter; Schmidt, Erwin R

2013-02-01

The columnar phenotype of apple trees (Malus x domestica) is characterized by a compact growth habit with fruit spurs instead of lateral branches. These properties provide significant economic advantages by enabling high density plantings. The columnar growth results from the presence of a dominant allele of the gene Columnar (Co) located on chromosome 10 which can appear in a heterozygous (Co/co) or homozygous (Co/Co) state. Although two deep sequencing approaches could shed some light on the transcriptome of columnar shoot apical meristems (SAMs), the molecular mechanisms of columnar growth are not yet elaborated. Since the influence of phytohormones is believed to have a pivotal role in the establishment of the phenotype, we performed RNA-Seq experiments to study genes associated with hormone homeostasis and clearly affected by the presence of Co. Our results provide a molecular explanation for earlier findings on the hormonal state of columnar apple trees. Additionally, they allow hypotheses on how the columnar phenotype might develop. Furthermore, we show a statistically approved enrichment of differentially regulated genes on chromosome 10 in the course of validating RNA-Seq results using additional gene expression studies.

Alterations of the cytoskeleton in human cells in space proved by life-cell imaging

PubMed Central

Corydon, Thomas J.; Kopp, Sascha; Wehland, Markus; Braun, Markus; Schütte, Andreas; Mayer, Tobias; Hülsing, Thomas; Oltmann, Hergen; Schmitz, Burkhard; Hemmersbach, Ruth; Grimm, Daniela

2016-01-01

Microgravity induces changes in the cytoskeleton. This might have an impact on cells and organs of humans in space. Unfortunately, studies of cytoskeletal changes in microgravity reported so far are obligatorily based on the analysis of fixed cells exposed to microgravity during a parabolic flight campaign (PFC). This study focuses on the development of a compact fluorescence microscope (FLUMIAS) for fast live-cell imaging under real microgravity. It demonstrates the application of the instrument for on-board analysis of cytoskeletal changes in FTC-133 cancer cells expressing the Lifeact-GFP marker protein for the visualization of F-actin during the 24th DLR PFC and TEXUS 52 rocket mission. Although vibration is an inevitable part of parabolic flight maneuvers, we successfully for the first time report life-cell cytoskeleton imaging during microgravity, and gene expression analysis after the 31st parabola showing a clear up-regulation of cytoskeletal genes. Notably, during the rocket flight the FLUMIAS microscope reveals significant alterations of the cytoskeleton related to microgravity. Our findings clearly demonstrate the applicability of the FLUMIAS microscope for life-cell imaging during microgravity, rendering it an important technological advance in live-cell imaging when dissecting protein localization. PMID:26818711

Discovery of Compact Quiescent Galaxies at Intermediate Redshifts in DEEP2

NASA Astrophysics Data System (ADS)

Blancato, Kirsten; Chilingarian, Igor; Damjanov, Ivana; Moran, Sean; Katkov, Ivan

2015-01-01

Compact quiescent galaxies in the redshift range 0.6 < z < 1.1 are the missing link needed to complete the evolutionary histories of these objects from the high redshift z ≥ 2 Universe to the local z ~ 0 Universe. We identify the first intermediate redshift compact quiescent galaxies by searching a sample of 1,089 objects in the DEEP2 Redshift Survey that have multi-band photometry, spectral fitting, and readily available structural parameters. We find 27 compact quiescent candidates between z = 0.6 and z = 1.1 where each candidate galaxy has archival Hubble Space Telescope (HST) imaging and is visually confirmed to be early-type. The candidates have half-light radii ranging from 0.83 < Re,c < 7.14 kpc (median Re,c = 1.77 kpc) and virial masses ranging from 2.2E10 < Mdyn < 5.6E11 Msun (median Mdyn = 7.7E10 Msun). Of our 27 compact quiescent candidates, 13 are truly compact with sizes at most half of the size of their z ~ 0 counterparts of the same mass. In addition to their structural properties bridging the gap between their high and low redshift counterparts, our sample of intermediate redshift quiescent galaxies span a large range of ages but is drawn from two distinct epochs of galaxy formation: formation at z > 2 which suggests these objects may be the relics of the observed high redshift compact galaxies and formation at z ≤ 2 which suggests there is an additional population of more recently formed massive compact galaxies. This work is supported in part by the NSF REU and DOD ASSURE programs under NSF grant no. 1262851 and by the Smithsonian Institution.

Discrete particle modeling and micromechanical characterization of bilayer tablet compaction.

PubMed

Yohannes, B; Gonzalez, M; Abebe, A; Sprockel, O; Nikfar, F; Kiang, S; Cuitiño, A M

2017-08-30

A mechanistic particle scale model is proposed for bilayer tablet compaction. Making bilayer tablets involves the application of first layer compaction pressure on the first layer powder and a second layer compaction pressure on entire powder bed. The bonding formed between the first layer and the second layer particles is crucial for the mechanical strength of the bilayer tablet. The bonding and the contact forces between particles of the first layer and second layer are affected by the deformation and rearrangement of particles due to the compaction pressures. Our model takes into consideration the elastic and plastic deformations of the first layer particles due to the first layer compaction pressure, in addition to the mechanical and physical properties of the particles. Using this model, bilayer tablets with layers of the same material and different materials, which are commonly used pharmaceutical powders, are tested. The simulations show that the strength of the layer interface becomes weaker than the strength of the two layers as the first layer compaction pressure is increased. The reduction of strength at the layer interface is related to reduction of the first layer surface roughness. The reduced roughness decreases the available bonding area and hence reduces the mechanical strength at the interface. In addition, the simulations show that at higher first layer compaction pressure the bonding area is significantly less than the total contact area at the layer interface. At the interface itself, there is a non-monotonic relationship between the bonding area and first layer force. The bonding area at the interface first increases and then decreases as the first layer pressure is increased. These results are in agreement with findings of previous experimental studies. Copyright © 2017 Elsevier B.V. All rights reserved.

Roller compaction of moist pharmaceutical powders.

PubMed

Wu, C-Y; Hung, W-L; Miguélez-Morán, A M; Gururajan, B; Seville, J P K

2010-05-31

The compression behaviour of powders during roller compaction is dominated by a number of factors, such as process conditions (roll speed, roll gap, feeding mechanisms and feeding speed) and powder properties (particle size, shape, moisture content). The moisture content affects the powder properties, such as the flowability and cohesion, but it is not clear how the moisture content will influence the powder compression behaviour during roller compaction. In this study, the effect of moisture contents on roller compaction behaviour of microcrystalline cellulose (MCC, Avicel PH102) was investigated experimentally. MCC samples of different moisture contents were prepared by mixing as-received MCC powder with different amount of water that was sprayed onto the powder bed being agitated in a rotary mixer. The flowability of these samples were evaluated in terms of the poured angle of repose and flow functions. The moist powders were then compacted using the instrumented roller compactor developed at the University of Birmingham. The flow and compression behaviour during roller compaction and the properties of produced ribbons were examined. It has been found that, as the moisture content increases, the flowability of moist MCC powders decreases and the powder becomes more cohesive. As a consequence of non-uniform flow of powder into the compaction zone induced by the friction between powder and side cheek plates, all produced ribbons have a higher density in the middle and lower densities at the edges. For the ribbons made of powders with high moisture contents, different hydration states across the ribbon width were also identified from SEM images. Moreover, it was interesting to find that these ribbons were split into two halves. This is attributed to the reduction in the mechanical strength of moist powder compacts with high moisture contents produced at high compression pressures. Copyright (c) 2010 Elsevier B.V. All rights reserved.

Hysteresis in DNA compaction by Dps is described by an Ising model

PubMed Central

Vtyurina, Natalia N.; Dulin, David; Docter, Margreet W.; Meyer, Anne S.; Dekker, Nynke H.; Abbondanzieri, Elio A.

2016-01-01

In all organisms, DNA molecules are tightly compacted into a dynamic 3D nucleoprotein complex. In bacteria, this compaction is governed by the family of nucleoid-associated proteins (NAPs). Under conditions of stress and starvation, an NAP called Dps (DNA-binding protein from starved cells) becomes highly up-regulated and can massively reorganize the bacterial chromosome. Although static structures of Dps–DNA complexes have been documented, little is known about the dynamics of their assembly. Here, we use fluorescence microscopy and magnetic-tweezers measurements to resolve the process of DNA compaction by Dps. Real-time in vitro studies demonstrated a highly cooperative process of Dps binding characterized by an abrupt collapse of the DNA extension, even under applied tension. Surprisingly, we also discovered a reproducible hysteresis in the process of compaction and decompaction of the Dps–DNA complex. This hysteresis is extremely stable over hour-long timescales despite the rapid binding and dissociation rates of Dps. A modified Ising model is successfully applied to fit these kinetic features. We find that long-lived hysteresis arises naturally as a consequence of protein cooperativity in large complexes and provides a useful mechanism for cells to adopt unique epigenetic states. PMID:27091987

The Spatial Distribution of Resolved Young Stars in Blue Compact Dwarf Galaxies

NASA Astrophysics Data System (ADS)

Murphy, K.; Crone, M. M.

2002-12-01

We present the first results from a survey of the distribution of resolved young stars in Blue Compact Dwarf Galaxies. In order to identify the dominant physical processes driving star formation in these puzzling galaxies, we use a multi-scale cluster-finding algorithm to quantify the characteristic scales and properties of star-forming regions, from sizes smaller than 10 pc up to the size of each entire galaxy. This project was partially funded by the Lubin Chair at Skidmore College.

Spontaneous Scalarization of Black Holes and Compact Stars from a Gauss-Bonnet Coupling.

PubMed

Silva, Hector O; Sakstein, Jeremy; Gualtieri, Leonardo; Sotiriou, Thomas P; Berti, Emanuele

2018-03-30

We identify a class of scalar-tensor theories with coupling between the scalar and the Gauss-Bonnet invariant that exhibit spontaneous scalarization for both black holes and compact stars. In particular, these theories formally admit all of the stationary solutions of general relativity, but these are not dynamically preferred if certain conditions are satisfied. Remarkably, black holes exhibit scalarization if their mass lies within one of many narrow bands. We find evidence that scalarization can occur in neutron stars as well.

Massive Compact Halo Objects from the relics of the cosmic quark-hadron transition

NASA Astrophysics Data System (ADS)

Banerjee, Shibaji; Bhattacharyya, Abhijit; Ghosh, Sanjay K.; Raha, Sibaji; Sinha, Bikash; Toki, Hiroshi

2003-03-01

The existence of compact gravitational lenses, with masses around 0.5 Msolar, has been reported in the halo of the Milky Way. The nature of these dark lenses is as yet obscure, particularly because these objects have masses well above the threshold for nuclear fusion. In this work, we show that they find a natural explanation as being the evolutionary product of the metastable false vacuum domains (the so-called strange quark nuggets) formed in a first order cosmic quark-hadron transition.

What do you gain from deconvolution? - Observing faint galaxies with the Hubble Space Telescope Wide Field Camera

NASA Technical Reports Server (NTRS)

Schade, David J.; Elson, Rebecca A. W.

1993-01-01

We describe experiments with deconvolutions of simulations of deep HST Wide Field Camera images containing faint, compact galaxies to determine under what circumstances there is a quantitative advantage to image deconvolution, and explore whether it is (1) helpful for distinguishing between stars and compact galaxies, or between spiral and elliptical galaxies, and whether it (2) improves the accuracy with which characteristic radii and integrated magnitudes may be determined. The Maximum Entropy and Richardson-Lucy deconvolution algorithms give the same results. For medium and low S/N images, deconvolution does not significantly improve our ability to distinguish between faint stars and compact galaxies, nor between spiral and elliptical galaxies. Measurements from both raw and deconvolved images are biased and must be corrected; it is easier to quantify and remove the biases for cases that have not been deconvolved. We find no benefit from deconvolution for measuring luminosity profiles, but these results are limited to low S/N images of very compact (often undersampled) galaxies.

Optimal space of linear classical observables for Maxwell k-forms via spacelike and timelike compact de Rham cohomologies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Benini, Marco, E-mail: mbenini87@gmail.com, E-mail: mbenini@uni-potsdam.de

Being motivated by open questions in gauge field theories, we consider non-standard de Rham cohomology groups for timelike compact and spacelike compact support systems. These cohomology groups are shown to be isomorphic respectively to the usual de Rham cohomology of a spacelike Cauchy surface and its counterpart with compact support. Furthermore, an analog of the usual Poincaré duality for de Rham cohomology is shown to hold for the case with non-standard supports as well. We apply these results to find optimal spaces of linear observables for analogs of arbitrary degree k of both the vector potential and the Faraday tensor.more » The term optimal has to be intended in the following sense: The spaces of linear observables we consider distinguish between different configurations; in addition to that, there are no redundant observables. This last point in particular heavily relies on the analog of Poincaré duality for the new cohomology groups.« less

BRD4 Regulates Transcription via Intrinsic HAT Activity | Center for Cancer Research

Cancer.gov

In order to express a gene, its DNA must be accessible to the transcription machinery. This requires chromatin de-compaction, which depends on the addition of acetyl groups to lysine residues on histones, thereby weakening interactions between histones and DNA and between adjacent nucleosomes.

Compact Gamma-Beam Source for Nuclear Security Technologies

NASA Astrophysics Data System (ADS)

Gladkikh, P.; Urakawa, J.

2015-10-01

A compact gamma-beam source dedicated to the development of the nuclear security technologies by use of the nuclear resonance fluorescence is described. Besides, such source is a very promising tool for novel technologies of the express cargoes inspection to prevent nuclear terrorism. Gamma-beam with the quanta energies from 0.3MeV to 7.2MeV is generated in the Compton scattering of the "green" laser photons on the electron beam with energies from 90MeV to 430MeV. The characteristic property of the proposed gammabeam source is a narrow spectrum (less than 1%) at high average gamma-yield (of 1013γ/s) due to special operation mode.

Microtube strip heat exchanger

NASA Astrophysics Data System (ADS)

Doty, F. D.

1992-07-01

The purpose of this contract has been to explore the limits of miniaturization of heat exchangers with the goals of (1) improving the theoretical understanding of laminar heat exchangers, (2) evaluating various manufacturing difficulties, and (3) identifying major applications for the technology. A low-cost, ultra-compact heat exchanger could have an enormous impact on industry in the areas of cryocoolers and energy conversion. Compact cryocoolers based on the reverse Brayton cycle (RBC) would become practical with the availability of compact heat exchangers. Many experts believe that hardware advances in personal computer technology will rapidly slow down in four to six years unless lowcost, portable cryocoolers suitable for the desktop supercomputer can be developed. Compact refrigeration systems would permit dramatic advances in high-performance computer work stations with 'conventional' microprocessors operating at 150 K, and especially with low-cost cryocoolers below 77 K. NASA has also expressed strong interest in our MTS exchanger for space-based RBC cryocoolers for sensor cooling. We have demonstrated feasibility of higher specific conductance by a factor of five than any other work in high-temperature gas-to-gas exchangers. These laminar-flow, microtube exchangers exhibit extremely low pressure drop compared to alternative compact designs under similar conditions because of their much shorter flow length and larger total flow area for lower flow velocities. The design appears to be amenable to mass production techniques, but considerable process development remains. The reduction in materials usage and the improved heat exchanger performance promise to be of enormous significance in advanced engine designs and in cryogenics.

Exact Delaunay normalization of the perturbed Keplerian Hamiltonian with tesseral harmonics

NASA Astrophysics Data System (ADS)

Mahajan, Bharat; Vadali, Srinivas R.; Alfriend, Kyle T.

2018-03-01

A novel approach for the exact Delaunay normalization of the perturbed Keplerian Hamiltonian with tesseral and sectorial spherical harmonics is presented in this work. It is shown that the exact solution for the Delaunay normalization can be reduced to quadratures by the application of Deprit's Lie-transform-based perturbation method. Two different series representations of the quadratures, one in powers of the eccentricity and the other in powers of the ratio of the Earth's angular velocity to the satellite's mean motion, are derived. The latter series representation produces expressions for the short-period variations that are similar to those obtained from the conventional method of relegation. Alternatively, the quadratures can be evaluated numerically, resulting in more compact expressions for the short-period variations that are valid for an elliptic orbit with an arbitrary value of the eccentricity. Using the proposed methodology for the Delaunay normalization, generalized expressions for the short-period variations of the equinoctial orbital elements, valid for an arbitrary tesseral or sectorial harmonic, are derived. The result is a compact unified artificial satellite theory for the sub-synchronous and super-synchronous orbit regimes, which is nonsingular for the resonant orbits, and is closed-form in the eccentricity as well. The accuracy of the proposed theory is validated by comparison with numerical orbit propagations.

NUSTAR and Suzaku x-ray spectroscopy of NGC 4151: Evidence for reflection from the inner accretion disk

DOE Office of Scientific and Technical Information (OSTI.GOV)

Keck, M. L.; Brenneman, L. W.; Ballantyne, D. R.

We present X-ray timing and spectral analyses of simultaneous 150 ks Nuclear Spectroscopic Telescope Array (NuSTAR) and Suzaku X-ray observations of the Seyfert 1.5 galaxy NGC 4151. We disentangle the continuum emission, absorption, and reflection properties of the active galactic nucleus (AGN) by applying inner accretion disk reflection and absorption-dominated models. With a time-averaged spectral analysis, we find strong evidence for relativistic reflection from the inner accretion disk. We find that relativistic emission arises from a highly ionized inner accretion disk with a steep emissivity profile, which suggests an intense, compact illuminating source. We find a preliminary, near-maximal black hole spinmore » $$a\\gt 0.9$$ accounting for statistical and systematic modeling errors. We find a relatively moderate reflection fraction with respect to predictions for the lamp post geometry, in which the illuminating corona is modeled as a point source. Through a time-resolved spectral analysis, we find that modest coronal and inner disk reflection (IDR) flux variation drives the spectral variability during the observations. We discuss various physical scenarios for the IDR model and we find that a compact corona is consistent with the observed features.« less

NuSTAR and Suzaku X-ray Spectroscopy of NGC 4151: Evidence for Reflection from the Inner Accretion Disk

NASA Astrophysics Data System (ADS)

Keck, M. L.; Brenneman, L. W.; Ballantyne, D. R.; Bauer, F.; Boggs, S. E.; Christensen, F. E.; Craig, W. W.; Dauser, T.; Elvis, M.; Fabian, A. C.; Fuerst, F.; García, J.; Grefenstette, B. W.; Hailey, C. J.; Harrison, F. A.; Madejski, G.; Marinucci, A.; Matt, G.; Reynolds, C. S.; Stern, D.; Walton, D. J.; Zoghbi, A.

2015-06-01

We present X-ray timing and spectral analyses of simultaneous 150 ks Nuclear Spectroscopic Telescope Array (NuSTAR) and Suzaku X-ray observations of the Seyfert 1.5 galaxy NGC 4151. We disentangle the continuum emission, absorption, and reflection properties of the active galactic nucleus (AGN) by applying inner accretion disk reflection and absorption-dominated models. With a time-averaged spectral analysis, we find strong evidence for relativistic reflection from the inner accretion disk. We find that relativistic emission arises from a highly ionized inner accretion disk with a steep emissivity profile, which suggests an intense, compact illuminating source. We find a preliminary, near-maximal black hole spin a\\gt 0.9 accounting for statistical and systematic modeling errors. We find a relatively moderate reflection fraction with respect to predictions for the lamp post geometry, in which the illuminating corona is modeled as a point source. Through a time-resolved spectral analysis, we find that modest coronal and inner disk reflection (IDR) flux variation drives the spectral variability during the observations. We discuss various physical scenarios for the IDR model and we find that a compact corona is consistent with the observed features.

Inverse design engineering of all-silicon polarization beam splitters

NASA Astrophysics Data System (ADS)

Frandsen, Lars H.; Sigmund, Ole

2016-03-01

Utilizing the inverse design engineering method of topology optimization, we have realized high-performing all-silicon ultra-compact polarization beam splitters. We show that the device footprint of the polarization beam splitter can be as compact as ~2 μm2 while performing experimentally with a polarization splitting loss lower than ~0.82 dB and an extinction ratio larger than ~15 dB in the C-band. We investigate the device performance as a function of the device length and find a lower length above which the performance only increases incrementally. Imposing a minimum feature size constraint in the optimization is shown to affect the performance negatively and reveals the necessity for light to scatter on a sub-wavelength scale to obtain functionalities in compact photonic devices.

Tableting Properties and Compression Models of Labisia pumila Tablets.

PubMed

Etti, C J; Yusof, Y A; Chin, N L; Mohd Tahir, S

2017-03-04

The tableting properties of Labisia pumila herbal powder, which is well known for its therapeutic benefits was investigated. The herbal powder was compressed into tablets using a stainless steel cylindrical uniaxial die of 13-mm- diameter with compaction pressures ranging from 7 to 25 MPa. Two feed weights, 0.5 and 1.0 g were used to form tablets. Some empirical models were used to describe the compressibility behavior of Labisia pumila tablets. The strength and density of tablets increased with increase in compaction pressure and resulted in reduction in porosity of the tablets. Smaller feeds, higher forces and increase in compaction pressure, contributed to more coherent tablets. These findings can be used to enhance the approach and understanding of tableting properties of Labisia pumila herbal powder tablets.

Chirped pulse inverse free-electron laser vacuum accelerator

DOEpatents

Hartemann, Frederic V.; Baldis, Hector A.; Landahl, Eric C.

2002-01-01

A chirped pulse inverse free-electron laser (IFEL) vacuum accelerator for high gradient laser acceleration in vacuum. By the use of an ultrashort (femtosecond), ultrahigh intensity chirped laser pulse both the IFEL interaction bandwidth and accelerating gradient are increased, thus yielding large gains in a compact system. In addition, the IFEL resonance condition can be maintained throughout the interaction region by using a chirped drive laser wave. In addition, diffraction can be alleviated by taking advantage of the laser optical bandwidth with negative dispersion focusing optics to produce a chromatic line focus. The combination of these features results in a compact, efficient vacuum laser accelerator which finds many applications including high energy physics, compact table-top laser accelerator for medical imaging and therapy, material science, and basic physics.

Oxygen regulates amino acid turnover and carbohydrate uptake during the preimplantation period of mouse embryo development.

PubMed

Wale, Petra L; Gardner, David K

2012-07-01

Oxygen is a powerful regulator of preimplantation embryo development, affecting gene expression, the proteome, and energy metabolism. Even a transient exposure to atmospheric oxygen can have a negative impact on embryo development, which is greatest prior to compaction, and subsequent postcompaction culture at low oxygen cannot alleviate this damage. In spite of this evidence, the majority of human in vitro fertilization is still performed at atmospheric oxygen. One of the physiological parameters shown to be affected by the relative oxygen concentration, carbohydrate metabolism, is linked to the ability of the mammalian embryo to develop in culture and remain viable after transfer. The aim of this study was, therefore, to determine the effect of oxygen concentration on the ability of mouse embryos to utilize both amino acids and carbohydrates both before and after compaction. Metabolomic and fluorometric analysis of embryo culture media revealed that when embryos were exposed to atmospheric oxygen during the cleavage stages, they exhibited significantly greater amino acid utilization and pyruvate uptake than when cultured under 5% oxygen. In contrast, postcompaction embryos cultured in atmospheric oxygen showed significantly lower mean amino acid utilization and glucose uptake. These metabolic changes correlated with developmental compromise because embryos grown in atmospheric oxygen at all stages showed significantly lower blastocyst formation and proliferation. These findings confirm the need to consider both embryo development and metabolism in establishing optimal human embryo growth conditions and prognostic markers of viability, and further highlight the impact of oxygen on such vital parameters.

Compact English-Chinese Dictionary (Yale Romanization).

ERIC Educational Resources Information Center

Wu, C.K.; Wu, K.S.

The 13,000 entries in this English-to-Chinese dictionary were chosen to represent "common words and expressions in art, education, science, sports, and music, as well as basic terminology in military and other fields." Each entry consists of an English word, an abbreviation for its part of speech, and one or more Chinese equivalents in…

The Versatility of Photo CD Technology in the Classroom.

ERIC Educational Resources Information Center

Mustoe, Myles

The Kodak Photo CD (compact disk) system provides a fun, new, very accessible way to integrate images into geography classroom presentations. Graphicacy deals with spatial information that can only be expressed by a graph, map, or photograph. The importance for geography students to develop visual observation and graphic interpretive skills is…

Regulation of inflorescence architecture by intertissue layer ligand-receptor communication between endodermis and phloem.

PubMed

Uchida, Naoyuki; Lee, Jin Suk; Horst, Robin J; Lai, Hung-Hsueh; Kajita, Ryoko; Kakimoto, Tatsuo; Tasaka, Masao; Torii, Keiko U

2012-04-17

Multicellular organisms achieve final body shape and size by coordinating cell proliferation, expansion, and differentiation. Loss of function in the Arabidopsis ERECTA (ER) receptor-kinase gene confers characteristic compact inflorescence architecture, but its underlying signaling pathways remain unknown. Here we report that the expression of ER in the phloem is sufficient to rescue compact er inflorescences. We further identified two Epidermal Patterning Factor-like (EPFL) secreted peptide genes, EPFL4 and EPFL6/CHALLAH (CHAL), as redundant, upstream components of ER-mediated inflorescence growth. The expression of EPFL4 or EPFL6 in the endodermis, a layer adjacent to phloem, is sufficient to rescue the er-like inflorescence of epfl4 epfl6 plants. EPFL4 and EPFL6 physically associate with ER in planta. Finally, transcriptome analysis of er and epfl4 epfl6 revealed a potential downstream component as well as a role for plant hormones in EPFL4/6- and ER-mediated inflorescence growth. Our results suggest that intercell layer communication between the endodermis and phloem mediated by peptide ligands and a receptor kinase coordinates proper inflorescence architecture in Arabidopsis.

Growth-Phase-Specific Modulation of Cell Morphology and Gene Expression by an Archaeal Histone Protein.

PubMed

Dulmage, Keely A; Todor, Horia; Schmid, Amy K

2015-09-08

In all three domains of life, organisms use nonspecific DNA-binding proteins to compact and organize the genome as well as to regulate transcription on a global scale. Histone is the primary eukaryotic nucleoprotein, and its evolutionary roots can be traced to the archaea. However, not all archaea use this protein as the primary DNA-packaging component, raising questions regarding the role of histones in archaeal chromatin function. Here, quantitative phenotyping, transcriptomic, and proteomic assays were performed on deletion and overexpression mutants of the sole histone protein of the hypersaline-adapted haloarchaeal model organism Halobacterium salinarum. This protein is highly conserved among all sequenced haloarchaeal species and maintains hallmark residues required for eukaryotic histone functions. Surprisingly, despite this conservation at the sequence level, unlike in other archaea or eukaryotes, H. salinarum histone is required to regulate cell shape but is not necessary for survival. Genome-wide expression changes in histone deletion strains were global, significant but subtle in terms of fold change, bidirectional, and growth phase dependent. Mass spectrometric proteomic identification of proteins from chromatin enrichments yielded levels of histone and putative nucleoid-associated proteins similar to those of transcription factors, consistent with an open and transcriptionally active genome. Taken together, these data suggest that histone in H. salinarum plays a minor role in DNA compaction but important roles in growth-phase-dependent gene expression and regulation of cell shape. Histone function in haloarchaea more closely resembles a regulator of gene expression than a chromatin-organizing protein like canonical eukaryotic histone. Histones comprise the major protein component of eukaryotic chromatin and are required for both genome packaging and global regulation of expression. The current paradigm maintains that archaea whose genes encode histone also use these proteins to package DNA. In contrast, here we demonstrate that the sole histone encoded in the genome of the salt-adapted archaeon Halobacterium salinarum is both unessential and unlikely to be involved in DNA compaction despite conservation of residues important for eukaryotic histones. Rather, H. salinarum histone is required for global regulation of gene expression and cell shape. These data are consistent with the hypothesis that H. salinarum histone, strongly conserved across all other known salt-adapted archaea, serves a novel role in gene regulation and cell shape maintenance. Given that archaea possess the ancestral form of eukaryotic histone, this study has important implications for understanding the evolution of histone function. Copyright © 2015 Dulmage et al.

Baby Skyrme model and fermionic zero modes

NASA Astrophysics Data System (ADS)

Queiruga, J. M.

2016-09-01

In this work we investigate some features of the fermionic sector of the supersymmetric version of the baby Skyrme model. We find that, in the background of Bogomol'nyi-Prasad-Sommerfield compact baby Skyrmions, fermionic zero modes are confined to the defect core. Further, we show that, while three Supersymmetry (SUSY) generators are broken in the defect core, SUSY is completely restored outside. We study also the effect of a D-term deformation of the model. Such a deformation allows for the existence of fermionic zero modes and broken SUSY outside the compact defect.

Signatures of compact halos of sterile-neutrino dark matter

NASA Astrophysics Data System (ADS)

Kühnel, Florian; Ohlsson, Tommy

2017-11-01

We investigate compact halos of sterile-neutrino dark matter and examine observable signatures with respect to neutrino and photon emission. Primarily, we consider two cases: primordial black-hole halos and ultracompact minihalos. In both cases, we find that there exists a broad range of possible parameter choices such that detection in the near future with x-ray and gamma-ray telescopes might be well possible. In fact, for energies above 10 TeV, the neutrino telescope IceCube would be a splendid detection machine for such macroscopic dark-matter candidates.

Cold and warm swelling of hydrophobic polymers

NASA Astrophysics Data System (ADS)

de Los Rios, Paolo; Caldarelli, Guido

2001-03-01

We introduce a polymer model where the transition from swollen to compact configurations is due to interactions between the monomers and the solvent. These interactions are the origin of the effective attractive interactions between hydrophobic amino acids in proteins. We find that in the low and high temperature phases polymers are swollen, and there is an intermediate phase where the most favorable configurations are compact. We argue that such a model captures in a single framework both the cold and the warm denaturation experimentally detected for thermosensitive polymers and for proteins.

Gravitational wave probes of parity violation in compact binary coalescences

NASA Astrophysics Data System (ADS)

Alexander, Stephon H.; Yunes, Nicolás

2018-03-01

Is gravity parity violating? Given the recent observations of gravitational waves from coalescing compact binaries, we develop a strategy to find an answer with current and future detectors. We identify the key signatures of parity violation in gravitational waves: amplitude birefringence in their propagation and a modified chirping rate in their generation. We then determine the optimal binaries to test the existence of parity violation in gravity, and prioritize the research in modeling that will be required to carry out such tests before detectors reach their design sensitivity.

Influence of coating steps of perovskite on low-temperature amorphous compact TiO x upon the morphology, crystallinity, and photovoltaic property correlation in planar perovskite solar cells

NASA Astrophysics Data System (ADS)

Shahiduzzaman, Md.; Furumoto, Yoshikazu; Yamamoto, Kohei; Yonezawa, Kyosuke; Azuma, Yosuke; Kitamura, Michinori; Matsuzaki, Hiroyuki; Karakawa, Makoto; Kuwabara, Takayuki; Takahashi, Kohshin; Taima, Tetsuya

2018-03-01

The fabrication of high-efficiency solution-processable perovskite solar cells has been achieved using mesostructured films and compact titanium dioxide (TiO2) layers in a process that involves high temperatures and cost. Here, we present an efficient approach for fabricating chemical-bath-deposited, low-temperature, and low-cost amorphous compact TiO x -based planar heterojunction perovskite solar cells by one-step and two-step coatings of the perovskite layer. We also investigate the effect of the number of perovskite coating steps on the compact TiO x layer. The grazing incidence wide-angle X-ray scattering technique is used to clarify the relationship between morphology, crystallinity, and photovoltaic properties of the resulting devices. Analysis of the films revealed that one-step spin-coating of perovskite exhibited an enhancement of film quality and crystallization that correlates to photovoltaic performance 1.5 times higher than that of a two-step-coated device. Our findings show that the resulting morphology, crystallinity, and device performances are strongly dependent on the number of coating steps of the perovskite thin layer on the compact TiO x layer. This result is useful knowledge for the low-cost production of planar perovskite solar cells.

Internal friction controls the speed of protein folding from a compact configuration.

PubMed

Pabit, Suzette A; Roder, Heinrich; Hagen, Stephen J

2004-10-05

Several studies have found millisecond protein folding reactions to be controlled by the viscosity of the solvent: Reducing the viscosity allows folding to accelerate. In the limit of very low solvent viscosity, however, one expects a different behavior. Internal interactions, occurring within the solvent-excluded interior of a compact molecule, should impose a solvent-independent upper limit to folding speed once the bulk diffusional motions become sufficiently rapid. Why has this not been observed? We have studied the effect of solvent viscosity on the folding of cytochrome c from a highly compact, late-stage intermediate configuration. Although the folding rate accelerates as the viscosity declines, it tends toward a finite limiting value approximately 10(5) s(-1) as the viscosity tends toward zero. This limiting rate is independent of the cosolutes used to adjust solvent friction. Therefore, interactions within the interior of a compact denatured polypeptide can limit the folding rate, but the limiting time scale is very fast. It is only observable when the solvent-controlled stages of folding are exceedingly rapid or else absent. Interestingly, we find a very strong temperature dependence in these "internal friction"-controlled dynamics, indicating a large energy scale for the interactions that govern reconfiguration within compact, near-native states of a protein.

Dynamic compaction of human mesenchymal stem/precursor cells (MSC) into spheres self-activates caspase-dependent IL1 signaling to enhance secretion of modulators of inflammation and immunity (PGE2, TSG6 and STC1)

PubMed Central

Bazhanov, Nikolay; Kuhlman, Jessica; Prockop, Darwin J.

2013-01-01

Human mesenchymal stem/precursor cells (MSC) are similar to some other stem/progenitor cells in that they compact into spheres when cultured in hanging drops or on non-adherent surfaces. Assembly of MSC into spheres alters many of their properties, including enhanced secretion of factors that mediate inflammatory and immune responses. Here we demonstrated that MSC spontaneously aggregated into sphere-like structures after injection into a subcutaneous air pouch or the peritoneum of mice. The structures were similar to MSC spheres formed in cultures demonstrated by the increased expression of genes for inflammation-modulating factors TSG6, STC1, and COX2, a key enzyme in production of PGE2. To identify the signaling pathways involved, hanging drop cultures were used to follow the time-dependent changes in the cells as they compacted into spheres. Among the genes up-regulated were genes for the stress-activated signaling pathway for IL1α/β, and the contact-dependent signaling pathway for Notch. An inhibitor of caspases reduced the up-regulation of IL1A/B expression, and inhibitors of IL1 signaling decreased production of PGE2, TSG6 and STC1. Also, inhibition of IL1A/B expression and secretion of PGE2 negated the anti-inflammatory effects of MSC spheres on stimulated macrophages. Experiments with γ-secretase inhibitors suggested that Notch signaling was also required for production of PGE2 but not TSG6 or STC1. The results indicated that assembly of MSC into spheres triggers caspase-dependent IL1 signaling and the secretion of modulators of inflammation and immunity. Similar aggregation in vivo may account for some of the effects observed with administration of the cells in animal models. PMID:23922312

Constraints on core collapse from the black hole mass function

NASA Astrophysics Data System (ADS)

Kochanek, C. S.

2015-01-01

We model the observed black hole mass function under the assumption that black hole formation is controlled by the compactness of the stellar core at the time of collapse. Low-compactness stars are more likely to explode as supernovae and produce neutron stars, while high-compactness stars are more likely to be failed supernovae that produce black holes with the mass of the helium core of the star. Using three sequences of stellar models and marginalizing over a model for the completeness of the black hole mass function, we find that the compactness ξ2.5 above which 50% of core collapses produce black holes is ξ _{2.5}^{50%}=0.24 (0.15 < ξ _{2.5}^{50%} < 0.37 at 90% confidence). The models also predict that f = 0.18 (0.09 < f < 0.39) of core collapses fail. We tested four other criteria for black hole formation based on ξ2.0 and ξ3.0, the compactnesses at enclosed masses of 2.0 or 3.0 rather than 2.5 M⊙, the mass of the iron core MFe, and the mass inside the oxygen burning shell MO. We found that ξ2.0 works as well as ξ2.5, while ξ3.0, MFe and MO are significantly worse. As expected from the high compactness of 20-25 M⊙ stars, black hole formation in this mass range provides a natural explanation of the red supergiant problem.

Histidine-rich stabilized polyplexes for cMet-directed tumor-targeted gene transfer

NASA Astrophysics Data System (ADS)

Kos, Petra; Lächelt, Ulrich; Herrmann, Annika; Mickler, Frauke Martina; Döblinger, Markus; He, Dongsheng; Krhač Levačić, Ana; Morys, Stephan; Bräuchle, Christoph; Wagner, Ernst

2015-03-01

Overexpression of the hepatocyte growth factor receptor/c-Met proto oncogene on the surface of a variety of tumor cells gives an opportunity to specifically target cancerous tissues. Herein, we report the first use of c-Met as receptor for non-viral tumor-targeted gene delivery. Sequence-defined oligomers comprising the c-Met binding peptide ligand cMBP2 for targeting, a monodisperse polyethylene glycol (PEG) for polyplex surface shielding, and various cationic (oligoethanamino) amide cores containing terminal cysteines for redox-sensitive polyplex stabilization, were assembled by solid-phase supported syntheses. The resulting oligomers exhibited a greatly enhanced cellular uptake and gene transfer over non-targeted control sequences, confirming the efficacy and target-specificity of the formed polyplexes. Implementation of endosomal escape-promoting histidines in the cationic core was required for gene expression without additional endosomolytic agent. The histidine-enriched polyplexes demonstrated stability in serum as well as receptor-specific gene transfer in vivo upon intratumoral injection. The co-formulation with an analogous PEG-free cationic oligomer led to a further compaction of pDNA polyplexes with an obvious change of shape as demonstrated by transmission electron microscopy. Such compaction was critically required for efficient intravenous gene delivery which resulted in greatly enhanced, cMBP2 ligand-dependent gene expression in the distant tumor.Overexpression of the hepatocyte growth factor receptor/c-Met proto oncogene on the surface of a variety of tumor cells gives an opportunity to specifically target cancerous tissues. Herein, we report the first use of c-Met as receptor for non-viral tumor-targeted gene delivery. Sequence-defined oligomers comprising the c-Met binding peptide ligand cMBP2 for targeting, a monodisperse polyethylene glycol (PEG) for polyplex surface shielding, and various cationic (oligoethanamino) amide cores containing terminal cysteines for redox-sensitive polyplex stabilization, were assembled by solid-phase supported syntheses. The resulting oligomers exhibited a greatly enhanced cellular uptake and gene transfer over non-targeted control sequences, confirming the efficacy and target-specificity of the formed polyplexes. Implementation of endosomal escape-promoting histidines in the cationic core was required for gene expression without additional endosomolytic agent. The histidine-enriched polyplexes demonstrated stability in serum as well as receptor-specific gene transfer in vivo upon intratumoral injection. The co-formulation with an analogous PEG-free cationic oligomer led to a further compaction of pDNA polyplexes with an obvious change of shape as demonstrated by transmission electron microscopy. Such compaction was critically required for efficient intravenous gene delivery which resulted in greatly enhanced, cMBP2 ligand-dependent gene expression in the distant tumor. Electronic supplementary information (ESI) available. See DOI: 10.1039/c4nr06556e

A Physical Model for Three-Phase Compaction in Silicic Magma Reservoirs

NASA Astrophysics Data System (ADS)

Huber, Christian; Parmigiani, Andrea

2018-04-01

We develop a model for phase separation in magma reservoirs containing a mixture of silicate melt, crystals, and fluids (exsolved volatiles). The interplay between the three phases controls the dynamics of phase separation and consequently the chemical and physical evolution of magma reservoirs. The model we propose is based on the two-phase damage theory approach of Bercovici et al. (2001, https://doi.org/10.1029/2000JB900430) and Bercovici and Ricard (2003, https://doi.org/10.1046/j.1365-246X.2003.01854.x) because it offers the leverage of considering interface (in the macroscopic limit) between phases that can deform depending on the mechanical work and phase changes taking place locally in the magma. Damage models also offer the advantage that pressure is defined uniquely to each phase and does not need to be equal among phases, which will enable us to consider, in future studies, the large capillary pressure at which fluids are mobilized in mature, crystal-rich, magma bodies. In this first analysis of three-phase compaction, we solve the three-phase compaction equations numerically for a simple 1-D problem where we focus on the effect of fluids on the efficiency of melt-crystal separation considering the competition between viscous and buoyancy stresses only. We contrast three sets of simulations to explore the behavior of three-phase compaction, a melt-crystal reference compaction scenario (two-phase compaction), a three-phase scenario without phase changes, and finally a three-phase scenario with a parameterized second boiling (crystallization-induced exsolution). The simulations show a dramatic difference between two-phase (melt crystals) and three-phase (melt-crystals-exsolved volatiles) compaction-driven phase separation. We find that the presence of a lighter, significantly less viscous fluid hinders melt-crystal separation.

Searching for Compact Radio Sources Associated with UCH ii Regions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Masqué, Josep M.; Trinidad, Miguel A.; Rodríguez-Rico, Carlos A.

Ultra-compact (UC)H ii regions represent a very early stage of massive star formation. The structure and evolution of these regions are not yet fully understood. Interferometric observations showed in recent years that compact sources of uncertain nature are associated with some UCH ii regions. To examine this, we carried out VLA 1.3 cm observations in the A configuration of selected UCH ii regions in order to report additional cases of compact sources embedded in UCH ii regions. With these observations, we find 13 compact sources that are associated with 9 UCH ii regions. Although we cannot establish an unambiguous naturemore » for the newly detected sources, we assess some of their observational properties. According to the results, we can distinguish between two types of compact sources. One type corresponds to sources that are probably deeply embedded in the dense ionized gas of the UCH ii region. These sources are photoevaporated by the exciting star of the region and will last for 10{sup 4}–10{sup 5} years. They may play a crucial role in the evolution of the UCH ii region as the photoevaporated material could replenish the expanding plasma and might provide a solution to the so-called lifetime problem of these regions. The second type of compact sources is not associated with the densest ionized gas of the region. A few of these sources appear resolved and may be photoevaporating objects such as those of the first type, but with significantly lower mass depletion rates. The remaining sources of this second type appear unresolved, and their properties are varied. We speculate on the similarity between the sources of the second type and those of the Orion population of radio sources.« less

Compact sub-kilohertz low-frequency quantum light source based on four-wave mixing in cesium vapor

NASA Astrophysics Data System (ADS)

Ma, Rong; Liu, Wei; Qin, Zhongzhong; Su, Xiaolong; Jia, Xiaojun; Zhang, Junxiang; Gao, Jiangrui

2018-03-01

Using a nondegenerate four-wave mixing (FWM) process based on a double-{\\Lambda} scheme in hot cesium vapor, we demonstrate a compact diode-laser-pumped quantum light source for the generation of quantum correlated twin beams with a maximum squeezing of 6.5 dB. The squeezing is observed at a Fourier frequency in the audio band down to 0.7 kHz which, to the best of our knowledge, is the first observation of sub-kilohertz intensity-difference squeezing in an atomic system so far. A phase-matching condition is also investigated in our system, which confirms the spatial-multi-mode characteristics of the FWM process. Our compact low-frequency squeezed light source may find applications in quantum imaging, quantum metrology, and the transfer of optical squeezing onto a matter wave.

ROSAT observations of compact groups of galaxies

NASA Technical Reports Server (NTRS)

Pildis, Rachel A.; Bregman, Joel N.; Evrard, August E.

1995-01-01

We have systematically analyzed a sample of 13 new and archival ROSAT Position Sensitive Proportional Counter (PSPC) observations of compact groups of galaxies: 12 Hickson compact groups plus the NCG 2300 group. We find that approximately two-thirds of the groups have extended X-ray emission and, in four of these, the emission is resolved into diffuse emission from gas at a temperature of kT approximately 1 keV in the group potential. All but one of the groups with extended emission have a spiral fraction of less than 50%. The baryon fraction of groups with diffuse emission is 5%-19%, similar to the values in clusters of galaxies. However, with a single exception (HCG 62), the gas-to-stellar mass ratio in our groups has a median value near 5%, somewhat greater than the values for individual early-type galaxies and two orders of magnitude than in clusters of galaxies. The X-ray luminosities of individual group galaxies are comparable to those of similar field galaxies, although the L(sub X)-L(sub B) relation for early-type galaxies may be flatter in compact groups than in the field.

Porosity and thermal collapse measurements of H2O, CH3OH, CO2, and H2O:CO2 ices.

PubMed

Isokoski, K; Bossa, J-B; Triemstra, T; Linnartz, H

2014-02-28

The majority of astronomical and laboratory based studies of interstellar ices have been focusing on ice constituents. Ice structure is a much less studied topic. Particularly the amount of porosity is an ongoing point of discussion. A porous ice offers more surface area than a compact ice, for reactions that are fully surface driven. In this paper we discuss the amount of compaction for four different ices--H2O, CH3OH, CO2 and mixed H2O : CO2 = 2 : 1--upon heating over an astronomically relevant temperature regime. Laser interference and Fourier transform infrared spectroscopy are used to confirm that for amorphous solid water the full signal loss of dangling OH bonds is not a proof for full compaction. These data are compared with the first compaction results for pure CH3OH, pure CO2 and mixed H2O : CO2 = 2 : 1 ice. Here we find that thermal segregation benefits from a higher degree of porosity.

Force-chain evolution in a two-dimensional granular packing compacted by vertical tappings

NASA Astrophysics Data System (ADS)

Iikawa, Naoki; Bandi, M. M.; Katsuragi, Hiroaki

2018-03-01

We experimentally study the statistics of force-chain evolution in a vertically-tapped two-dimensional granular packing by using photoelastic disks. In this experiment, the tapped granular packing is gradually compacted. During the compaction, the isotropy of grain configurations is quantified by measuring the deviator anisotropy derived from fabric tensor, and then the evolution of force-chain structure is quantified by measuring the interparticle forces and force-chain orientational order parameter. As packing fraction increases, the interparticle force increases and finally saturates to an asymptotic value. Moreover, the grain configurations and force-chain structures become isotropically random as the tapping-induced compaction proceeds. In contrast, the total length of force chains remains unchanged. From the correlations of those parameters, we find two relations: (i) a positive correlation between the isotropy of grain configurations and the disordering of force-chain orientations, and (ii) a negative correlation between the increasing of interparticle forces and the disordering of force-chain orientations. These relations are universally held regardless of the mode of particle motions with or without convection.

A compact, all-optical, THz wave generator based on self-modulation in a slab photonic crystal waveguide with a single sub-nanometer graphene layer.

PubMed

Asadi, R; Ouyang, Z; Mohammd, M M

2015-07-14

We design a compact, all-optical THz wave generator based on self-modulation in a 1-D slab photonic crystal (PhC) waveguide with a single sub-nanometer graphene layer by using enhanced nonlinearity of graphene. It has been shown that at the bandgap edge of higher bands of a 1-D slab PhC, through only one sub-nanometer graphene layer we can obtain a compact, high modulation factor (about 0.98 percent), self-intensity modulator at a high frequency (about 0.6 THz) and low threshold intensity (about 15 MW per square centimeter), and further a compact, all-optical THz wave generator by integrating the self-modulator with a THz photodiode or photonic mixer. Such a THz source is expected to have a relatively high efficiency compared with conventional sources based on optical methods. The proposed THz source can find wide applications in THz science and technology, e.g., in THz imaging, THz sensors and detectors, THz communication systems, and THz optical integrated logic circuits.

Aesthetic judgment of triangular shape: compactness and not the golden ratio determines perceived attractiveness

PubMed Central

Friedenberg, Jay

2012-01-01

Many studies over a period of more than a century have investigated the influence of the golden ratio on perceived geometric beauty. Surprisingly, very few of these studies used triangular shapes. In Experiment 1, we presented right triangles that differed in regard to their elongation determined by increasing the length of one side relative to another. Attractiveness ratings did not peak at the golden ratio, but there was a very strong influence of axis ratio overall. Participant ratings were a negative decreasing function of ratio. Triangles that pointed upward were judged as significantly more attractive than those that pointed down. We interpret these results according to a compactness hypothesis: triangles that are more compact are less likely to move or break and are thus considered more pleasing. Orientation also affects aesthetics. Upward-pointing triangles with a base parallel to the ground, regardless of their compactness, are also considered more perceptually stable and attractive. These findings were replicated across stimulus type in a second experiment with isosceles triangles and across testing procedure in a third experiment using a paired comparison technique. PMID:23145277

Heat Melt Compaction as an Effective Treatment for Eliminating Microorganisms from Solid Waste

NASA Technical Reports Server (NTRS)

Hummerick, Mary P.; Strayer, Richard; McCoy, LaShelle; Richard, Jeffrey; Ruby, Anna; Wheeler, Raymond

2012-01-01

One of the technologies being tested at Ames Research Center as part of the logistics and repurposing project is heat melt compaction (HMC) of solid waste to reduce volume, remove water and render a biologically stable and safe product. Studies at Kennedy Space Center have focused on the efficacy of the heat melt compaction process for killing microorganisms in waste and specific compacter operation protocols, i.e., time and temperature, required to achieve a sterile, stable product. The work reported here includes a controlled study to examine the survival and potential re-growth of specific microorganisms over a 6-month period of storage after heating and compaction. Before heating and compaction, ersatz solid wastes were inoculated with Bacillus amyloliquefaciens and Rhodotorula mucilaginosa, previously isolated from recovered space shuttle mission food and packaging waste. Compacted HMC tiles were sampled for microbiological analysis at time points between 0 and 180 days of storage in a controlled environment chamber. In addition, biological indicator strips containing spores of Bacillus atrophaeus and Ceo bacillus stearothermophilus were imbedded in trash to assess the efficacy of the HMC process to achieve sterilization. Analysis of several tiles compacted at 180 C for times of 40 minutes to over 2 hours detected organisms in all tile samples with the exception of one exposed to 180 C for approximately 2 hours. Neither of the inoculated organisms was recovered, and the biological indicator strips were negative for growth in all tiles indicating at least local sterilization of tile areas. The findings suggest that minimum time/temperature combination is required for complete sterilization. Microbial analysis of tiles processed at lower temperatures from 130 C-150 C at varying times will be discussed, as well as analysis of the bacteria and fungi present on the compactor hardware as a result of exposure to the waste and the surrounding environment. The two organisms inoculated into the waste were among those isolated and identified from the HMC surfaces indicating the possibility of cross contamination.

Histone h1 depletion impairs embryonic stem cell differentiation.

PubMed

Zhang, Yunzhe; Cooke, Marissa; Panjwani, Shiraj; Cao, Kaixiang; Krauth, Beth; Ho, Po-Yi; Medrzycki, Magdalena; Berhe, Dawit T; Pan, Chenyi; McDevitt, Todd C; Fan, Yuhong

2012-01-01

Pluripotent embryonic stem cells (ESCs) are known to possess a relatively open chromatin structure; yet, despite efforts to characterize the chromatin signatures of ESCs, the role of chromatin compaction in stem cell fate and function remains elusive. Linker histone H1 is important for higher-order chromatin folding and is essential for mammalian embryogenesis. To investigate the role of H1 and chromatin compaction in stem cell pluripotency and differentiation, we examine the differentiation of embryonic stem cells that are depleted of multiple H1 subtypes. H1c/H1d/H1e triple null ESCs are more resistant to spontaneous differentiation in adherent monolayer culture upon removal of leukemia inhibitory factor. Similarly, the majority of the triple-H1 null embryoid bodies (EBs) lack morphological structures representing the three germ layers and retain gene expression signatures characteristic of undifferentiated ESCs. Furthermore, upon neural differentiation of EBs, triple-H1 null cell cultures are deficient in neurite outgrowth and lack efficient activation of neural markers. Finally, we discover that triple-H1 null embryos and EBs fail to fully repress the expression of the pluripotency genes in comparison with wild-type controls and that H1 depletion impairs DNA methylation and changes of histone marks at promoter regions necessary for efficiently silencing pluripotency gene Oct4 during stem cell differentiation and embryogenesis. In summary, we demonstrate that H1 plays a critical role in pluripotent stem cell differentiation, and our results suggest that H1 and chromatin compaction may mediate pluripotent stem cell differentiation through epigenetic repression of the pluripotency genes.

The progenitors of the first red sequence galaxies at z ~ 2

NASA Astrophysics Data System (ADS)

Barro, G.; Faber, S.; Perez-Gonzalez, P.; Koo, D.; Williams, C.; Kocevski, D.; Trump, J.; Mozena, M.

2013-07-01

Nearby galaxies come in two flavors: red quiescent galaxies (QGs) with old stellar populations, and blue young star-forming galaxies (SFGs). This color bimodality seems to be already in place at z = 2 - 3, presenting also strong correlations with size and morphology. Surprisingly, massive QGs at higher redshifts are ~5 times smaller than local, equal mass analogs. In contrast, most of the massive SFGs at these redshifts are still relatively large disks. The strong bimodality in both SFR and sizes indicates that some SFGs must experience strong structural transformations accompanied by a rapid truncation of the star-formation to match the observed properties of QGs. Using high-resolution HST/WFC3 F160W imaging from the CANDELS survey in GOODS-S and UDS, along with multi-wavelength ancillary data, we analyze stellar masses, SFRs and sizes of a sample of massive (M* > 1010 M ⊙) galaxies at z = 1.4 - 3.0 to identify a population of compact SFGs with similar structural properties as compact QGs at z~2. We also find that the number density of QGs increases rapidly since z = 3. Among these, the number of compact QGs builds up first, and only at z < 1.8 we do start finding a sizable number of extended QGs. This suggests that the bulk of these galaxies are assembled at late times by both continuous migration (quenching) of non-compact SFGs and size growth of cQGs. As a result of this growth, the population of cQGs disappears by z~1. Simultaneously, we identify a population of compact SFGs (cSFGs) whose number density decreases steadily with time since z = 3.0, being almost completely absent at z < 1.4. The number of cSFGs makes up less than 20% of all massive SFGs, but they present similar number densities as cQGs down to z~2, suggesting an evolutionary link between the two populations.

NUSTAR and SUZAKU X-ray spectroscopy of NGC 4151: Evidence for reflection from the inner accretion disk

DOE PAGES

Keck, M. L.; Brenneman, L. W.; Ballantyne, D. R.; ...

2015-06-15

We present X-ray timing and spectral analyses of simultaneous 150 ks Nuclear Spectroscopic Telescope Array (NuSTAR) and Suzaku X-ray observations of the Seyfert 1.5 galaxy NGC 4151. We disentangle the continuum emission, absorption, and reflection properties of the active galactic nucleus (AGN) by applying inner accretion disk reflection and absorption-dominated models. With a time-averaged spectral analysis, we find strong evidence for relativistic reflection from the inner accretion disk. We find that relativistic emission arises from a highly ionized inner accretion disk with a steep emissivity profile, which suggests an intense, compact illuminating source. We find a preliminary, near-maximal black hole spinmore » $$a\\gt 0.9$$ accounting for statistical and systematic modeling errors. We find a relatively moderate reflection fraction with respect to predictions for the lamp post geometry, in which the illuminating corona is modeled as a point source. Through a time-resolved spectral analysis, we find that modest coronal and inner disk reflection (IDR) flux variation drives the spectral variability during the observations. As a result, we discuss various physical scenarios for the IDR model and we find that a compact corona is consistent with the observed features.« less

NUSTAR and SUZAKU X-ray spectroscopy of NGC 4151: Evidence for reflection from the inner accretion disk

DOE Office of Scientific and Technical Information (OSTI.GOV)

Keck, M. L.; Brenneman, L. W.; Ballantyne, D. R.

We present X-ray timing and spectral analyses of simultaneous 150 ks Nuclear Spectroscopic Telescope Array (NuSTAR) and Suzaku X-ray observations of the Seyfert 1.5 galaxy NGC 4151. We disentangle the continuum emission, absorption, and reflection properties of the active galactic nucleus (AGN) by applying inner accretion disk reflection and absorption-dominated models. With a time-averaged spectral analysis, we find strong evidence for relativistic reflection from the inner accretion disk. We find that relativistic emission arises from a highly ionized inner accretion disk with a steep emissivity profile, which suggests an intense, compact illuminating source. We find a preliminary, near-maximal black hole spinmore » $$a\\gt 0.9$$ accounting for statistical and systematic modeling errors. We find a relatively moderate reflection fraction with respect to predictions for the lamp post geometry, in which the illuminating corona is modeled as a point source. Through a time-resolved spectral analysis, we find that modest coronal and inner disk reflection (IDR) flux variation drives the spectral variability during the observations. As a result, we discuss various physical scenarios for the IDR model and we find that a compact corona is consistent with the observed features.« less

An experimental study of permeability within an out-of-autoclave vacuum-bag-only CFRP laminate

NASA Astrophysics Data System (ADS)

Wallace, Landon F.

The out-of-autoclave vacuum-bag-only (OOA-VBO) manufacturing process is a process that eliminates an autoclave when manufacturing aerospace quality carbon fiber reinforced plastics (CFRP). OOA-VBO pre-impregnated resin tow systems rely on air channel networks that guide unwanted voids out of the laminate. The air path networks can be characterized by measuring the permeability of a pre-cured laminate. Permeability results were successfully obtained for a laminate with a compaction similar to that found in a typical vacuum bagging setup. A study was done to find the relationship between compaction of the laminate and permeability. Permeability was measured as the laminate cured, using a constant temperature ramp rate. An experimental nodal analysis was performed to find the permeability at the midpoint of the in-plane direction.

MUSE spectroscopy and deep observations of a unique compact JWST target, lensing cluster CLIO

NASA Astrophysics Data System (ADS)

Griffiths, Alex; Conselice, Christopher J.; Alpaslan, Mehmet; Frye, Brenda L.; Diego, Jose M.; Zitrin, Adi; Yan, Haojing; Ma, Zhiyuan; Barone-Nugent, Robert; Bhatawdekar, Rachana; Driver, Simon P.; Robotham, Aaron S. G.; Windhorst, Rogier A.; Wyithe, J. Stuart B.

2018-04-01

We present the results of a VLT MUSE/FORS2 and Spitzer survey of a unique compact lensing cluster CLIO at z = 0.42, discovered through the GAMA survey using spectroscopic redshifts. Compact and massive clusters such as this are understudied, but provide a unique prospective on dark matter distributions and for finding background lensed high-z galaxies. The CLIO cluster was identified for follow-up observations due to its almost unique combination of high-mass and dark matter halo concentration, as well as having observed lensing arcs from ground-based images. Using dual band optical and infra-red imaging from FORS2 and Spitzer, in combination with MUSE optical spectroscopy we identify 89 cluster members and find background sources out to z = 6.49. We describe the physical state of this cluster, finding a strong correlation between environment and galaxy spectral type. Under the assumption of an NFW profile, we measure the total mass of CLIO to be M200 = (4.49 ± 0.25) × 1014 M⊙. We build and present an initial strong-lensing model for this cluster, and measure a relatively low intracluster light (ICL) fraction of 7.21 ± 1.53 per cent through galaxy profile fitting. Due to its strong potential for lensing background galaxies and its low ICL, the CLIO cluster will be a target for our 110 h James Webb Space Telescope `Webb Medium-Deep Field' (WMDF) GTO program.

The AIMSS Project - III. The stellar populations of compact stellar systems

NASA Astrophysics Data System (ADS)

Janz, Joachim; Norris, Mark A.; Forbes, Duncan A.; Huxor, Avon; Romanowsky, Aaron J.; Frank, Matthias J.; Escudero, Carlos G.; Faifer, Favio R.; Forte, Juan Carlos; Kannappan, Sheila J.; Maraston, Claudia; Brodie, Jean P.; Strader, Jay; Thompson, Bradley R.

2016-02-01

In recent years, a growing zoo of compact stellar systems (CSSs) have been found whose physical properties (mass, size, velocity dispersion) place them between classical globular clusters (GCs) and true galaxies, leading to debates about their nature. Here we present results using a so far underutilized discriminant, their stellar population properties. Based on new spectroscopy from 8-10m telescopes, we derive ages, metallicities, and [α/Fe] of 29 CSSs. These range from GCs with sizes of merely a few parsec to compact ellipticals (cEs) larger than M32. Together with a literature compilation, this provides a panoramic view of the stellar population characteristics of early-type systems. We find that the CSSs are predominantly more metal rich than typical galaxies at the same stellar mass. At high mass, the cEs depart from the mass-metallicity relation of massive early-type galaxies, which forms a continuous sequence with dwarf galaxies. At lower mass, the metallicity distribution of ultracompact dwarfs (UCDs) changes at a few times 107 M⊙, which roughly coincides with the mass where luminosity function arguments previously suggested the GC population ends. The highest metallicities in CSSs are paralleled only by those of dwarf galaxy nuclei and the central parts of massive early types. These findings can be interpreted as CSSs previously being more massive and undergoing tidal interactions to obtain their current mass and compact size. Such an interpretation is supported by CSSs with direct evidence for tidal stripping, and by an examination of the CSS internal escape velocities.

Origin of 10{sup 15}–10{sup 16} G magnetic fields in the central engine of gamma ray bursts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Souza, Rafael S. de; Opher, Reuven, E-mail: rafael@astro.iag.usp.br, E-mail: opher@astro.iag.usp.br

2010-02-01

Various authors have suggested that the gamma-ray burst (GRB) central engine is a rapidly rotating, strongly magnetized, ( ∼ 10{sup 15}–10{sup 16} G) compact object. The strong magnetic field can accelerate and collimate the relativistic flow and the rotation of the compact object can be the energy source of the GRB. The major problem in this scenario is the difficulty of finding an astrophysical mechanism for obtaining such intense fields. Whereas, in principle, a neutron star could maintain such strong fields, it is difficult to justify a scenario for their creation. If the compact object is a black hole, themore » problem is more difficult since, according to general relativity it has ''no hair'' (i.e., no magnetic field). Schuster, Blackett, Pauli, and others have suggested that a rotating neutral body can create a magnetic field by non-minimal gravitational-electromagnetic coupling (NMGEC). The Schuster-Blackett form of NMGEC was obtained from the Mikhail and Wanas's tetrad theory of gravitation (MW). We call the general theory NMGEC-MW. We investigate here the possible origin of the intense magnetic fields ∼ 10{sup 15}–10{sup 16} G in GRBs by NMGEC-MW. Whereas these fields are difficult to explain astrophysically, we find that they are easily explained by NMGEC-MW. It not only explains the origin of the ∼ 10{sup 15}–10{sup 16} G fields when the compact object is a neutron star, but also when it is a black hole.« less

Universities and Industry: Does the Lambert Code of Governance Meet the Requirements of Good Governance?

ERIC Educational Resources Information Center

Buckland, Roger

2004-01-01

The Lambert Model Code of Governance proposes to institutionalise the dominance of governors from commercial and industrial organisations as core members of compact and effective boards controlling UK universities. It is the latest expression of a fashion for viewing university governance as an overly-simple example of an obsolete system, where…

A Compact Formula for Rotations as Spin Matrix Polynomials

DOE PAGES

Curtright, Thomas L.; Fairlie, David B.; Zachos, Cosmas K.

2014-08-12

Group elements of SU(2) are expressed in closed form as finite polynomials of the Lie algebra generators, for all definite spin representations of the rotation group. Here, the simple explicit result exhibits connections between group theory, combinatorics, and Fourier analysis, especially in the large spin limit. Salient intuitive features of the formula are illustrated and discussed.

Analytical transmission cross-coefficients for pink beam X-ray microscopy based on compound refractive lenses.

PubMed

Falch, Ken Vidar; Detlefs, Carsten; Snigirev, Anatoly; Mathiesen, Ragnvald H

2018-01-01

Analytical expressions for the transmission cross-coefficients for x-ray microscopes based on compound refractive lenses are derived based on Gaussian approximations of the source shape and energy spectrum. The effects of partial coherence, defocus, beam convergence, as well as lateral and longitudinal chromatic aberrations are accounted for and discussed. Taking the incoherent limit of the transmission cross-coefficients, a compact analytical expression for the modulation transfer function of the system is obtained, and the resulting point, line and edge spread functions are presented. Finally, analytical expressions for optimal numerical aperture, coherence ratio, and bandwidth are given. Copyright © 2017 Elsevier B.V. All rights reserved.

Suspension-thermal noise in spring–antispring systems for future gravitational-wave detectors

NASA Astrophysics Data System (ADS)

Harms, Jan; Mow-Lowry, Conor M.

2018-01-01

Spring–antispring systems have been investigated in the context of low-frequency seismic isolation in high-precision optical experiments. These systems provide the possibility to tune the fundamental resonance frequency to, in principle, arbitrarily low values, and at the same time maintain a compact design. It was argued though that thermal noise in spring–antispring systems would not be as small as one may naively expect from lowering the fundamental resonance frequency. In this paper, we present calculations of suspension-thermal noise for spring–antispring systems potentially relevant in future gravitational-wave detectors, i.e. the beam-balance tiltmeter, and the Roberts linkage. We find a concise expression of the suspension-thermal noise spectrum, which assumes a form very similar to the well-known expression for a simple pendulum. For systems such as the Roberts linkage foreseen as passive seismic isolation, we find that while they can provide strong seismic isolation due to a very low fundamental resonance frequency, their thermal noise is determined by the dimension of the system and is insensitive to fine-tunings of the geometry that can strongly influence the resonance frequency. By analogy, i.e. formal similarity of the equations of motion, this is true for all horizontal mechanical isolation systems with spring–antispring dynamics. This imposes strict requirements on mechanical spring–antispring systems for seismic isolation in potential future low-frequency gravitational-wave detectors as we discuss for the four main concepts, atom-interferometric, superconducting, torsion-bars, and conventional laser interferometer, and generally suggests that thermal noise needs to be evaluated carefully for high-precision experiments implementing spring–antispring dynamics.

[Renal cell carcinoma associated with Xp11.2 translocations/TFE3 gene fusions: a study of 11 cases and review of literature].

PubMed

Rao, Qiu; Zhou, Xiao-jun; Wu, Bo; Ma, Heng-hui; Zhou, Hang-bo; Liu, Xiao-hong; Chen, Jie-yu

2007-04-01

To study the clinicopathologic features, differential diagnosis and prognosis of renal cell carcinoma associated with Xp11.2 translocations/TFE3 gene fusions. The histopathologic findings and immunophenotype of 11 cases of renal cell carcinoma associated with Xp11.2 translocations/TFE3 gene fusions were studied. Follow-up data (ranged from 10 to 112 months) were also analyzed. There were a total of 7 females and 4 males. The age of patients ranged from 8 to 26 years (mean = 16.3 years). The diameter of the tumors varied from 2.5 to 6.0 cm. Histologically, two morphologic patterns were seen. The first pattern consisted of alveolar, papillary or nested architecture. The tumor cells contained voluminous, clear to eosinophilic cytoplasm, distinct cell borders, vesicular chromatin, and prominent nucleoli. Psammoma bodies were frequently found and could be abundant. In contrast, the second pattern was composed of nested and compact architecture. The tumor cells possessed less abundant cytoplasm and inconspicuous nucleoli. Few psammoma bodies were detected. Immunohistochemical study showed that all cases strongly expressed TFE3, CD10 and P504s. Variable positivity for pan-cytokeratin, epithelial membrane antigen and vimentin was also noted. None of them expressed CK7, Ksp-cadherin and CD117. Renal cell carcinoma associated with Xp11.2 translocations/TFE3 gene fusions is a newly described but rarely encountered subtype of renal cell carcinoma. Pathologic diagnosis can be established when taken age of the patients, histopathologic findings and immunoreactivity for TFE3 protein into consideration.

Changes in microtubule stability and density in myelin-deficient shiverer mouse CNS axons

NASA Technical Reports Server (NTRS)

Kirkpatrick, L. L.; Witt, A. S.; Payne, H. R.; Shine, H. D.; Brady, S. T.

2001-01-01

Altered axon-Schwann cell interactions in PNS myelin-deficient Trembler mice result in changed axonal transport rates, neurofilament and microtubule-associated protein phosphorylation, neurofilament density, and microtubule stability. To determine whether PNS and CNS myelination have equivalent effects on axons, neurofilaments, and microtubules in CNS, myelin-deficient shiverer axons were examined. The genetic defect in shiverer is a deletion in the myelin basic protein (MBP) gene, an essential component of CNS myelin. As a result, shiverer mice have little or no compact CNS myelin. Slow axonal transport rates in shiverer CNS axons were significantly increased, in contrast to the slowing in demyelinated PNS nerves. Even more striking were substantial changes in the composition and properties of microtubules in shiverer CNS axons. The density of axonal microtubules is increased, reflecting increased expression of tubulin in shiverer, and the stability of microtubules is drastically reduced in shiverer axons. Shiverer transgenic mice with two copies of a wild-type myelin basic protein transgene have an intermediate level of compact myelin, making it possible to determine whether the actual level of compact myelin is an important regulator of axonal microtubules. Both increased microtubule density and reduced microtubule stability were still observed in transgenic mouse nerves, indicating that signals beyond synaptogenesis and the mere presence of compact myelin are required for normal regulation of the axonal microtubule cytoskeleton.

Resolved H I Observations of Local Analogs to z ∼ 1 Luminous Compact Blue Galaxies: Evidence for Rotation-supported Disks

NASA Astrophysics Data System (ADS)

Rabidoux, Katie; Pisano, D. J.; Garland, C. A.; Guzmán, Rafael; Castander, Francisco J.; Wolfe, Spencer A.

2018-01-01

While bright, blue, compact galaxies are common at z∼ 1, they are relatively rare in the local universe, and their evolutionary paths are uncertain. We have obtained resolved H I observations of nine z∼ 0 luminous compact blue galaxies (LCBGs) using the Giant Metrewave Radio Telescope and Very Large Array in order to measure their kinematic and dynamical properties and better constrain their evolutionary possibilities. We find that the LCBGs in our sample are rotating galaxies that tend to have nearby companions, relatively high central velocity dispersions, and can have disturbed velocity fields. We calculate rotation velocities for each galaxy by measuring half of the velocity gradient along their major axes and correcting for inclination using axis ratios derived from SDSS images of each galaxy. We compare our measurements to those previously made with single dishes and find that single-dish measurements tend to overestimate LCBGs’ rotation velocities and H I masses. We also compare the ratio of LCBGs’ rotation velocities and velocity dispersions to those of other types of galaxies and find that LCBGs are strongly rotationally supported at large radii, similar to other disk galaxies, though within their half-light radii the {V}{rot}/σ values of their H I are comparable to stellar {V}{rot}/σ values of dwarf elliptical galaxies. We find that LCBGs’ disks on average are gravitationally stable, though conditions may be conducive to local gravitational instabilities at the largest radii. Such instabilities could lead to the formation of star-forming gas clumps in the disk, resulting eventually in a small central bulge or bar.

Quantifying the thickness of the electrical double layer neutralizing a planar electrode: the capacitive compactness.

PubMed

Guerrero-García, Guillermo Iván; González-Tovar, Enrique; Chávez-Páez, Martín; Kłos, Jacek; Lamperski, Stanisław

2017-12-20

The spatial extension of the ionic cloud neutralizing a charged colloid or an electrode is usually characterized by the Debye length associated with the supporting charged fluid in the bulk. This spatial length arises naturally in the linear Poisson-Boltzmann theory of point charges, which is the cornerstone of the widely used Derjaguin-Landau-Verwey-Overbeek formalism describing the colloidal stability of electrified macroparticles. By definition, the Debye length is independent of important physical features of charged solutions such as the colloidal charge, electrostatic ion correlations, ionic excluded volume effects, or specific short-range interactions, just to mention a few. In order to include consistently these features to describe more accurately the thickness of the electrical double layer of an inhomogeneous charged fluid in planar geometry, we propose here the use of the capacitive compactness concept as a generalization of the compactness of the spherical electrical double layer around a small macroion (González-Tovar et al., J. Chem. Phys. 2004, 120, 9782). To exemplify the usefulness of the capacitive compactness to characterize strongly coupled charged fluids in external electric fields, we use integral equations theory and Monte Carlo simulations to analyze the electrical properties of a model molten salt near a planar electrode. In particular, we study the electrode's charge neutralization, and the maximum inversion of the net charge per unit area of the electrode-molten salt system as a function of the ionic concentration, and the electrode's charge. The behaviour of the associated capacitive compactness is interpreted in terms of the charge neutralization capacity of the highly correlated charged fluid, which evidences a shrinking/expansion of the electrical double layer at a microscopic level. The capacitive compactness and its first two derivatives are expressed in terms of experimentally measurable macroscopic properties such as the differential and integral capacity, the electrode's surface charge density, and the mean electrostatic potential at the electrode's surface.

Back to Normal! Gaussianizing posterior distributions for cosmological probes

NASA Astrophysics Data System (ADS)

Schuhmann, Robert L.; Joachimi, Benjamin; Peiris, Hiranya V.

2014-05-01

We present a method to map multivariate non-Gaussian posterior probability densities into Gaussian ones via nonlinear Box-Cox transformations, and generalizations thereof. This is analogous to the search for normal parameters in the CMB, but can in principle be applied to any probability density that is continuous and unimodal. The search for the optimally Gaussianizing transformation amongst the Box-Cox family is performed via a maximum likelihood formalism. We can judge the quality of the found transformation a posteriori: qualitatively via statistical tests of Gaussianity, and more illustratively by how well it reproduces the credible regions. The method permits an analytical reconstruction of the posterior from a sample, e.g. a Markov chain, and simplifies the subsequent joint analysis with other experiments. Furthermore, it permits the characterization of a non-Gaussian posterior in a compact and efficient way. The expression for the non-Gaussian posterior can be employed to find analytic formulae for the Bayesian evidence, and consequently be used for model comparison.

Bethe Ansatz solutions for highest states in Script N = 4 SYM and AdS/CFT duality

NASA Astrophysics Data System (ADS)

Beccaria, Matteo; DelDebbio, Luigi

2006-09-01

We consider the operators with highest anomalous dimension Δ in the compact rank-one sectors fraktur sfraktur u(1|1) and fraktur sfraktur u(2) of Script N = 4 super Yang-Mills. We study the flow of Δ from weak to strong 't Hooft coupling λ by solving (i) the all-loop gauge Bethe Ansatz, (ii) the quantum string Bethe Ansatz. The two calculations are carefully compared in the strong coupling limit and exhibit different exponents ν in the leading order expansion Δ ~ λν. We find ν = 1/2 and ν = 1/4 for the gauge or string solution. This strong coupling discrepancy is not unexpected, and it provides an explicit example where the gauge Bethe Ansatz solution cannot be trusted at large λ. Instead, the string solution perfectly reproduces the Gubser-Klebanov-Polyakov law Δ = 2n1/2 λ1/4. In particular, we provide an analytic expression for the integer level n as a function of the U(1) charge in both sectors.

The Dynamic Architectural and Epigenetic Nuclear Landscape: Developing the Genomic Almanac of Biology and Disease

PubMed Central

Tai, Phillip W. L.; Zaidi, Sayyed K.; Wu, Hai; Grandy, Rodrigo A.; Montecino, Martin M.; van Wijnen, André J.; Lian, Jane B.; Stein, Gary S.; Stein, Janet L.

2014-01-01

Compaction of the eukaryotic genome into the confined space of the cell nucleus must occur faithfully throughout each cell cycle to retain gene expression fidelity. For decades, experimental limitations to study the structural organization of the interphase nucleus restricted our understanding of its contributions towards gene regulation and disease. However, within the past few years, our capability to visualize chromosomes in vivo with sophisticated fluorescence microscopy, and to characterize chromosomal regulatory environments via massively-parallel sequencing methodologies have drastically changed how we currently understand epigenetic gene control within the context of three-dimensional nuclear structure. The rapid rate at which information on nuclear structure is unfolding brings challenges to compare and contrast recent observations with historic findings. In this review, we discuss experimental breakthroughs that have influenced how we understand and explore the dynamic structure and function of the nucleus, and how we can incorporate historical perspectives with insights acquired from the ever-evolving advances in molecular biology and pathology. PMID:24242872

Understanding the effects of decompaction maintenance on the infill state and play performance of third-generation artificial grass pitches

PubMed Central

Forrester, Stephanie E; McLaren, Nicholas J

2015-01-01

Third generation artificial grass pitches have been observed to get harder over time. The maintenance technique of rubber infill decompaction is intended to help slow, or reverse, this process. At present, little is understood about either the science of the infill compaction process or the efficacy of decompaction maintenance. The objective of this study was to measure the changes in rubber infill net bulk density, force reduction (impact absorption) and vertical ball rebound under various levels of compactive effort in controlled laboratory-based testing. The assessments were repeated after the systems had been raked to simulate the decompaction maintenance techniques. These tests defined the limits of compaction (loose to maximally compacted) in terms of the change in rubber infill net bulk density, force reduction and vertical ball rebound. Site testing was also undertaken at four third generation pitches immediately pre and post decompaction, to determine the measurable effects in the less well controlled field environment. Rubber infill net bulk density was found to increase as compactive effort increased, resulting in increased hardness. Decompacting the surface was found to approximately fully reverse these effects. In comparison, the site measurements demonstrated similar but notably smaller magnitudes of change following the decompaction process suggesting that the field state pre and post decompaction did not reach the extremes obtained in the laboratory. The findings suggest that rubber infill net bulk density is an important parameter influencing the hardness of artificial grass and that decompactions can be an effective method to reverse compaction related hardness changes. PMID:29708108

Bright Compact Bulges (BCBs) at intermediate redshifts

NASA Astrophysics Data System (ADS)

Sachdeva, Sonali; Saha, Kanak

2018-04-01

Studying bright (MB < -20), intermediate-redshift (0.4 < z < 1.0), disc dominated (nB < 2.5) galaxies from HST/ACS and WFC3 in Chandra Deep Field South, in rest-frame B and I-band, we found a new class of bulges which is brighter and more compact than ellipticals. We refer to them as "Bright, Compact Bulges" (BCBs) - they resemble neither classical nor pseudo-bulges and constitute ˜12% of the total bulge population at these redshifts. Examining free-bulge + disc decomposition sample and elliptical galaxy sample from Simard et al. (2011), we find that only ˜0.2% of the bulges can be classified as BCBs in the local Universe. Bulge to total ratio (B/T) of disc galaxies with BCBs is (at ˜0.4) a factor of ˜2 and ˜4 larger than for those with classical and pseudo bulges. BCBs are ˜2.5 and ˜6 times more massive than classical and pseudo bulges. Although disc galaxies with BCBs host the most massive and dominant bulge type, their specific star formation rate is 1.5-2 times higher than other disc galaxies. This is contrary to the expectations that a massive compact bulge would lead to lower star formation rates. We speculate that our BCB host disc galaxies are descendant of massive, compact and passive elliptical galaxies observed at higher redshifts. Those high redshift ellipticals lack local counterparts and possibly evolved by acquiring a compact disc around them. The overall properties of BCBs supports a picture of galaxy assembly in which younger discs are being accreted around massive pre-existing spheroids.

Origins of structure in globular proteins.

PubMed Central

Chan, H S; Dill, K A

1990-01-01

The principal forces of protein folding--hydrophobicity and conformational entropy--are nonspecific. A long-standing puzzle has, therefore, been: What forces drive the formation of the specific internal architectures in globular proteins? We find that any self-avoiding flexible polymer molecule will develop large amounts of secondary structure, helices and parallel and antiparallel sheets, as it is driven to increasing compactness by any force of attraction among the chain monomers. Thus structure formation arises from the severity of steric constraints in compact polymers. This steric principle of organization can account for why short helices are stable in globular proteins, why there are parallel and anti-parallel sheets in proteins, and why weakly unfolded proteins have some secondary structure. On this basis, it should be possible to construct copolymers, not necessarily using amino acids, that can collapse to maximum compactness in incompatible solvents and that should then have structural organization resembling that of proteins. Images PMID:2385597

Neural networks for vertical microcode compaction

NASA Astrophysics Data System (ADS)

Chu, Pong P.

1992-09-01

Neural networks provide an alternative way to solve complex optimization problems. Instead of performing a program of instructions sequentially as in a traditional computer, neural network model explores many competing hypotheses simultaneously using its massively parallel net. The paper shows how to use the neural network approach to perform vertical micro-code compaction for a micro-programmed control unit. The compaction procedure includes two basic steps. The first step determines the compatibility classes and the second step selects a minimal subset to cover the control signals. Since the selection process is an NP- complete problem, to find an optimal solution is impractical. In this study, we employ a customized neural network to obtain the minimal subset. We first formalize this problem, and then define an `energy function' and map it to a two-layer fully connected neural network. The modified network has two types of neurons and can always obtain a valid solution.

Brute-force mapmaking with compact interferometers: a MITEoR northern sky map from 128 to 175 MHz

NASA Astrophysics Data System (ADS)

Zheng, H.; Tegmark, M.; Dillon, J. S.; Liu, A.; Neben, A. R.; Tribiano, S. M.; Bradley, R. F.; Buza, V.; Ewall-Wice, A.; Gharibyan, H.; Hickish, J.; Kunz, E.; Losh, J.; Lutomirski, A.; Morgan, E.; Narayanan, S.; Perko, A.; Rosner, D.; Sanchez, N.; Schutz, K.; Valdez, M.; Villasenor, J.; Yang, H.; Zarb Adami, K.; Zelko, I.; Zheng, K.

2017-03-01

We present a new method for interferometric imaging that is ideal for the large fields of view and compact arrays common in 21 cm cosmology. We first demonstrate the method with the simulations for two very different low-frequency interferometers, the Murchison Widefield Array and the MIT Epoch of Reionization (MITEoR) experiment. We then apply the method to the MITEoR data set collected in 2013 July to obtain the first northern sky map from 128 to 175 MHz at ∼2° resolution and find an overall spectral index of -2.73 ± 0.11. The success of this imaging method bodes well for upcoming compact redundant low-frequency arrays such as Hydrogen Epoch of Reionization Array. Both the MITEoR interferometric data and the 150 MHz sky map are available at http://space.mit.edu/home/tegmark/omniscope.html.

A new direction for dark matter research: intermediate-mass compact halo objects

NASA Astrophysics Data System (ADS)

Chapline, George F.; Frampton, Paul H.

2016-11-01

The failure to find evidence for elementary particles that could serve as the constituents of dark matter brings to mind suggestions that dark matter might consist of massive compact objects (MACHOs). In particular, it has recently been argued that MACHOs with masses > 15Msolar may have been prolifically produced at the onset of the big bang. Although a variety of astrophysical signatures for primordial MACHOs with masses in this range have been discussed in the literature, we favor a strategy that uses the potential for magnification of stars outside our galaxy due to gravitational microlensing of these stars by MACHOs in the halo of our galaxy. We point out that the effect of the motion of the Earth on the shape of the micro-lensing brightening curves provides a promising approach to testing over the course of next several years the hypothesis that dark matter consists of massive compact objects.

Cosmology on a cosmic ring

DOE Office of Scientific and Technical Information (OSTI.GOV)

Niedermann, Florian; Schneider, Robert, E-mail: florian.niedermann@physik.lmu.de, E-mail: robert.bob.schneider@physik.uni-muenchen.de

We derive the modified Friedmann equations for a generalization of the Dvali-Gabadadze-Porrati (DGP) model in which the brane has one additional compact dimension. The main new feature is the emission of gravitational waves into the bulk. We study two classes of solutions: first, if the compact dimension is stabilized, the waves vanish and one exactly recovers DGP cosmology. However, a stabilization by means of physical matter is not possible for a tension-dominated brane, thus implying a late time modification of 4D cosmology different from DGP. Second, for a freely expanding compact direction, we find exact attractor solutions with zero 4Dmore » Hubble parameter despite the presence of a 4D cosmological constant. The model hence constitutes an explicit example of dynamical degravitation at the full nonlinear level. Without stabilization, however, there is no 4D regime and the model is ruled out observationally, as we demonstrate explicitly by comparing to supernova data.« less

Collapsing granular beds: the role of interstitial air.

PubMed

Homan, Tess; Gjaltema, Christa; van der Meer, Devaraj

2014-05-01

A prefluidized sand bed consisting of fine particles compactifies when it is subjected to a shock. We observe that the response depends on both the shock strength and the ambient pressure, where, counterintuitively, at high ambient pressure the compaction is larger, which we connect to a decrease of the static friction inside the bed. We find that the interstitial air is trapped inside the bed during and long after compaction. We deduce this from measuring the pressure changes above and below the bed: The top pressure decreases abruptly, on the time scale of the compaction, whereas that below the bed slowly rises to a maximum. Subsequently, both gently relax to ambient values. We formulate a one-dimensional diffusion model that uses only the change in bed height and the ambient pressure as an input, and we show that it leads to a fully quantitative understanding of the measured pressure variations.

A regulatory toolbox of MiniPromoters to drive selective expression in the brain.

PubMed

Portales-Casamar, Elodie; Swanson, Douglas J; Liu, Li; de Leeuw, Charles N; Banks, Kathleen G; Ho Sui, Shannan J; Fulton, Debra L; Ali, Johar; Amirabbasi, Mahsa; Arenillas, David J; Babyak, Nazar; Black, Sonia F; Bonaguro, Russell J; Brauer, Erich; Candido, Tara R; Castellarin, Mauro; Chen, Jing; Chen, Ying; Cheng, Jason C Y; Chopra, Vik; Docking, T Roderick; Dreolini, Lisa; D'Souza, Cletus A; Flynn, Erin K; Glenn, Randy; Hatakka, Kristi; Hearty, Taryn G; Imanian, Behzad; Jiang, Steven; Khorasan-zadeh, Shadi; Komljenovic, Ivana; Laprise, Stéphanie; Liao, Nancy Y; Lim, Jonathan S; Lithwick, Stuart; Liu, Flora; Liu, Jun; Lu, Meifen; McConechy, Melissa; McLeod, Andrea J; Milisavljevic, Marko; Mis, Jacek; O'Connor, Katie; Palma, Betty; Palmquist, Diana L; Schmouth, Jean-François; Swanson, Magdalena I; Tam, Bonny; Ticoll, Amy; Turner, Jenna L; Varhol, Richard; Vermeulen, Jenny; Watkins, Russell F; Wilson, Gary; Wong, Bibiana K Y; Wong, Siaw H; Wong, Tony Y T; Yang, George S; Ypsilanti, Athena R; Jones, Steven J M; Holt, Robert A; Goldowitz, Daniel; Wasserman, Wyeth W; Simpson, Elizabeth M

2010-09-21

The Pleiades Promoter Project integrates genomewide bioinformatics with large-scale knockin mouse production and histological examination of expression patterns to develop MiniPromoters and related tools designed to study and treat the brain by directed gene expression. Genes with brain expression patterns of interest are subjected to bioinformatic analysis to delineate candidate regulatory regions, which are then incorporated into a panel of compact human MiniPromoters to drive expression to brain regions and cell types of interest. Using single-copy, homologous-recombination "knockins" in embryonic stem cells, each MiniPromoter reporter is integrated immediately 5' of the Hprt locus in the mouse genome. MiniPromoter expression profiles are characterized in differentiation assays of the transgenic cells or in mouse brains following transgenic mouse production. Histological examination of adult brains, eyes, and spinal cords for reporter gene activity is coupled to costaining with cell-type-specific markers to define expression. The publicly available Pleiades MiniPromoter Project is a key resource to facilitate research on brain development and therapies.

Charge-based MOSFET model based on the Hermite interpolation polynomial

NASA Astrophysics Data System (ADS)

Colalongo, Luigi; Richelli, Anna; Kovacs, Zsolt

2017-04-01

An accurate charge-based compact MOSFET model is developed using the third order Hermite interpolation polynomial to approximate the relation between surface potential and inversion charge in the channel. This new formulation of the drain current retains the same simplicity of the most advanced charge-based compact MOSFET models such as BSIM, ACM and EKV, but it is developed without requiring the crude linearization of the inversion charge. Hence, the asymmetry and the non-linearity in the channel are accurately accounted for. Nevertheless, the expression of the drain current can be worked out to be analytically equivalent to BSIM, ACM and EKV. Furthermore, thanks to this new mathematical approach the slope factor is rigorously defined in all regions of operation and no empirical assumption is required.

Compact cross-dispersion device based on a prism and a plane transmission grating

NASA Astrophysics Data System (ADS)

Yang, Qinghua; Wang, Weiqiang

2018-05-01

This paper presents a cross-dispersion prism-grating device using a plane transmission grating attached directly to a prism, which is different from traditional cross-dispersion grating-prism systems that are based on the reflection grating. Unlike conventional direct-vision grism or constant-dispersion grism in which both the prism and grating have the same dispersion direction, for this device the dispersion directions of the prism and grating are different. The analytical expressions for the cross-dispersion of this device are derived in detail and the formulas of the footprint of the dispersed spectra are given. The numerical results and ray-tracing simulations by ZEMAX are shown. The device provides a compact, small-sized and broadband cross-dispersion device used for the medium resolution spectrometer.

Coherent States for Kronecker Products of Non Compact Groups: Formulation and Applications

NASA Technical Reports Server (NTRS)

Bambah, Bindu A.; Agarwal, Girish S.

1996-01-01

We introduce and study the properties of a class of coherent states for the group SU(1,1) X SU(1,1) and derive explicit expressions for these using the Clebsch-Gordan algebra for the SU(1,1) group. We restrict ourselves to the discrete series representations of SU(1,1). These are the generalization of the 'Barut Girardello' coherent states to the Kronecker Product of two non-compact groups. The resolution of the identity and the analytic phase space representation of these states is presented. This phase space representation is based on the basis of products of 'pair coherent states' rather than the standard number state canonical basis. We discuss the utility of the resulting 'bi-pair coherent states' in the context of four-mode interactions in quantum optics.

Compact radio sources in luminous infrared galaxies

NASA Astrophysics Data System (ADS)

Parra, Rodrigo

2007-08-01

Radio interferometry is an observational technique of high sensitivity and incomparably high spatial resolution. Moreover, because radio waves can freely propagate through interstellar dust and gas, it allows the study of regions of the universe completely obscured at other wavelengths. This thesis reports the observational and theoretical results of my research during the past four years which are mostly based on interferometric radio data. The COLA sample is an infrared selected sample of active star forming galaxies. We conducted 6 cm VLA and VLBI snapshot observations of the northern half of this sample. The radio emission seen at VLA scales is consistent with being powered by star formation activity because it follows the far infrared to radio correlation. We detect 22% of the sample sources in our VLBI snapshots. Based on luminosity arguments, we argue that these sub-parsec VLBI sources are powered by AGN activity. Furthermore, we find that VLBI detections are preferentially found in sources whose VLA scale structures have the highest peak brightnesses suggesting a strong correlation between compact starburst and AGN activity. This observational result is consistent with the theoretical picture of an Eddington-limited nuclear starburst acting as the last valve in the pipeline transporting the gas from kiloparsec scales onto the accretion disc of a buried AGN. Arp 220 is the archetypical ultra luminous infrared galaxy. For many years this source has been known to harbour a compact (~100 pc) cluster of unresolved 18 cm bright sources believed to be bright core collapse supernovae. Using multiwavelength VLBI observations, we obtained for the first time radio spectra for 18 of these sources. We find that over a half of them have spectra consistent with young supernovae. The rest can be better explained as older supernova remnants interacting with the high density starburst ISM. This finding allowed us to constrain the number of possible scenarios for the Arp 220 starburst. A subset of luminous infrared galaxies contain non-thermal spectral line emission from the OH radical. These OH megamasers often show diffuse extended (~100 pc) low gain emission surrounding compact ([Special characters omitted. 1 pc) high gain maser spots. These observational features have been explained in terms of unsaturated and saturated masers. Using numerical simulations we have shown how both the diffuse and compact components of the OH megamaser observed towards the luminous infrared galaxy IIIZw35 can be explained by a single phase of unsaturated maser clouds in which the compact bright masers are caused by the random line-of-sight overlap of several such clouds and the diffuse component by the beam spatial average of many low gain clouds too weak to be seen independently. The theoretical tools developed to analyse this particular case have been extended to the general problem of propagation of radiation in clumpy media.

A high stellar velocity dispersion for a compact massive galaxy at redshift z = 2.186.

PubMed

van Dokkum, Pieter G; Kriek, Mariska; Franx, Marijn

2009-08-06

Recent studies have found that the oldest and most luminous galaxies in the early Universe are surprisingly compact, having stellar masses similar to present-day elliptical galaxies but much smaller sizes. This finding has attracted considerable attention, as it suggests that massive galaxies have grown in size by a factor of about five over the past ten billion years (10 Gyr). A key test of these results is a determination of the stellar kinematics of one of the compact galaxies: if the sizes of these objects are as extreme as has been claimed, their stars are expected to have much higher velocities than those in present-day galaxies of the same mass. Here we report a measurement of the stellar velocity dispersion of a massive compact galaxy at redshift z = 2.186, corresponding to a look-back time of 10.7 Gyr. The velocity dispersion is very high at km s(-1), consistent with the mass and compactness of the galaxy inferred from photometric data. This would indicate significant recent structural and dynamical evolution of massive galaxies over the past 10 Gyr. The uncertainty in the dispersion was determined from simulations that include the effects of noise and template mismatch. However, we cannot exclude the possibility that some subtle systematic effect may have influenced the analysis, given the low signal-to-noise ratio of our spectrum.

Constructively determining the MBL spectrum using Tensor Networks

NASA Astrophysics Data System (ADS)

Clark, Bryan; Yu, Xiongjie; Pekker, David

All the eigenstates of a many-body localized phase can be compactly represented in the tensor-network language. Current algorithms to find these states often only target single states and/or require difficult optimization to find. In this talk we will show how to generate every eigenstate in the spectrum constructively and discuss its implication for the properties of the MBL phase.

Do Irregularly Shaped School Attendance Zones Contribute to Racial Segregation or Integration?

PubMed Central

Saporito, Salvatore; Van Riper, David

2017-01-01

This research investigates if and how much the shapes of school attendance zones contribute to racial segregation in schools. We find that the typical school attendance zone is relatively compact and resembles a square-like shape. Compact zones typically draw children from local residential areas, and since local areas are often racially homogeneous, this suggests that high levels of racial segregation in the largest school districts are largely structured by existing residential segregation. Still, this study finds that the United States contains some attendance zones with highly irregular shapes—some of which are as irregular as the most irregular Congressional District. Although relatively rare, attendance zones that are highly irregular in shape almost always contain racially diverse student populations. This racial diversity contributes to racial integration within school districts. These findings contradict recent theoretical and empirical scholarship arguing that irregularly shaped zones contribute to racial segregation in schools. Our findings suggest that most racial segregation in school attendance zones is driven by large-scale segregation across residential areas rather than a widespread practice among school districts to exacerbate racial segregation by delineating irregularly shaped attendance zones. PMID:28804732

Compaction Characteristics of Earth-Rock Mixtures. Report 1. Vicksburg Silty Clay and Degray Dam Clayey Sandy Gravel

DTIC Science & Technology

1973-05-01

dry density of total sample Yf = dry unit weight of finer fraction G = bulk specific gravity of coarser fraction (based on ovendry weightq). Same as G...ttl~o o 40 oe o Fig. ii. Theoretical and experimental densities of eclayey sandy gravel (GC) DeGray meterial expressions require tests performed on

Electrostatics of a Point Charge between Intersecting Planes: Exact Solutions and Method of Images

ERIC Educational Resources Information Center

Mei, W. N.; Holloway, A.

2005-01-01

In this work, the authors present a commonly used example in electrostatics that could be solved exactly in a conventional manner, yet expressed in a compact form, and simultaneously work out special cases using the method of images. Then, by plotting the potentials and electric fields obtained from these two methods, the authors demonstrate that…

Compact perturbative expressions for neutrino oscillations in matter

DOE PAGES

Denton, Peter B.; Minakata, Hisakazu; Parke, Stephen J.

2016-06-08

We further develop and extend a recent perturbative framework for neutrino oscillations in uniform matter density so that the resulting oscillation probabilities are accurate for the complete matter potential versus baseline divided by neutrino energy plane. This extension also gives the exact oscillation probabilities in vacuum for all values of baseline divided by neutrino energy. The expansion parameter used is related to the ratio of the solar to the atmosphericmore » $$\\Delta m^2$$ scales but with a unique choice of the atmospheric $$\\Delta m^2$$ such that certain first-order effects are taken into account in the zeroth-order Hamiltonian. Using a mixing matrix formulation, this framework has the exceptional feature that the neutrino oscillation probability in matter has the same structure as in vacuum, to all orders in the expansion parameter. It also contains all orders in the matter potential and $$\\sin\\theta_{13}$$. It facilitates immediate physical interpretation of the analytic results, and makes the expressions for the neutrino oscillation probabilities extremely compact and very accurate even at zeroth order in our perturbative expansion. Furthermore, the first and second order results are also given which improve the precision by approximately two or more orders of magnitude per perturbative order.« less

The Parsec-Scale Morphology of Southern GPS Sources

NASA Astrophysics Data System (ADS)

Edwards, P. G.; Tingay, S. J.

2016-12-01

Multi-frequency, multi-epoch ATCA observations of a sample of AGN resulted in the identification of nine new candidate Giga-hertz Peaked Spectrum sources. Here, we present Long Baseline Array observations at 4.8 GHz of the four candidates with no previously published VLBI image, and consider these together with previously published VLBI images of the other five sources. We find core-jet or compact double morphologies dominate, with further observations required to distinguish between these two possibilities for some sources. One of the nine candidates, PKS 1831-711, displays appreciable variability, suggesting its GPS spectrum is more ephemeral in nature. We focus in particular on the apparent relationship between a narrow spectral width and `compact double' parsec-scale morphology, finding further examples, but also exceptions to this trend. An examination of the VLBI morphologies high-redshift (z > 3) sub-class of GPS sources suggests that core-jet morphologies predominate in this class.

Addendum to "Compact Perturbative Expressions for Neutrino Oscillations in Matter"

DOE Office of Scientific and Technical Information (OSTI.GOV)

Denton, Peter B.; Minakata, Hisakazu; Parke, Stephen J.

2018-01-19

In this paper we rewrite the neutrino mixing angles and mass squared differences in matter given, in our original paper, in a notation that is more conventional for the reader. Replacing the usual neutrino mixing angles and mass squared differences in the expressions for the vacuum oscillation probabilities with these matter mixing angles and mass squared differences gives an excellent approximation to the oscillation probabilities in matter. Comparisons for T2K, NOvA, T2HKK and DUNE are also given for neutrinos and anti-neutrinos, disappearance and appearance channels, normal ordering and inverted ordering.

Abnormal placental development and early embryonic lethality in EpCAM-null mice.

PubMed

Nagao, Keisuke; Zhu, Jianjian; Heneghan, Mallorie B; Hanson, Jeffrey C; Morasso, Maria I; Tessarollo, Lino; Mackem, Susan; Udey, Mark C

2009-12-31

EpCAM (CD326) is encoded by the tacstd1 gene and expressed by a variety of normal and malignant epithelial cells and some leukocytes. Results of previous in vitro experiments suggested that EpCAM is an intercellular adhesion molecule. EpCAM has been extensively studied as a potential tumor marker and immunotherapy target, and more recent studies suggest that EpCAM expression may be characteristic of cancer stem cells. To gain insights into EpCAM function in vivo, we generated EpCAM -/- mice utilizing an embryonic stem cell line with a tacstd1 allele that had been disrupted. Gene trapping resulted in a protein comprised of the N-terminus of EpCAM encoded by 2 exons of the tacstd1 gene fused in frame to betageo. EpCAM +/- mice were viable and fertile and exhibited no obvious abnormalities. Examination of EpCAM +/- embryos revealed that betageo was expressed in several epithelial structures including developing ears (otocysts), eyes, branchial arches, gut, apical ectodermal ridges, lungs, pancreas, hair follicles and others. All EpCAM -/- mice died in utero by E12.5, and were small, developmentally delayed, and displayed prominent placental abnormalities. In developing placentas, EpCAM was expressed throughout the labyrinthine layer and by spongiotrophoblasts as well. Placentas of EpCAM -/- embryos were compact, with thin labyrinthine layers lacking prominent vascularity. Parietal trophoblast giant cells were also dramatically reduced in EpCAM -/- placentas. EpCAM was required for differentiation or survival of parietal trophoblast giant cells, normal development of the placental labyrinth and establishment of a competent maternal-fetal circulation. The findings in EpCAM-reporter mice suggest involvement of this molecule in development of vital organs including the gut, kidneys, pancreas, lungs, eyes, and limbs.

ACCELERATION OF COMPACT RADIO JETS ON SUB-PARSEC SCALES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lee, Sang-Sung; Lobanov, Andrei P.; Krichbaum, Thomas P.

2016-08-01

Jets of compact radio sources are highly relativistic and Doppler boosted, making studies of their intrinsic properties difficult. Observed brightness temperatures can be used to study the intrinsic physical properties of relativistic jets, and constrain models of jet formation in the inner jet region. We aim to observationally test such inner jet models. The very long baseline interferometry (VLBI) cores of compact radio sources are optically thick at a given frequency. The distance of the core from the central engine is inversely proportional to the frequency. Under the equipartition condition between the magnetic field energy and particle energy densities, themore » absolute distance of the VLBI core can be predicted. We compiled the brightness temperatures of VLBI cores at various radio frequencies of 2, 8, 15, and 86 GHz. We derive the brightness temperature on sub-parsec scales in the rest frame of the compact radio sources. We find that the brightness temperature increases with increasing distance from the central engine, indicating that the intrinsic jet speed (the Lorentz factor) increases along the jet. This implies that the jets are accelerated in the (sub-)parsec regions from the central engine.« less

Comprehensive review of geosynthetic clay liner and compacted clay liner

NASA Astrophysics Data System (ADS)

Shankar, M. Uma; Muthukumar, M.

2017-11-01

Human activity inevitably produces waste materials that must be managed. Some waste can be reused. However many wastes that cannot be used beneficially must be disposed of ensuring environmental safety. One of the common methods of disposal is landfilling. The most common problems of the landfill site are environmental degradation and groundwater contamination caused by leachate produced during the decomposition process of organic material and rainfall. Liner in a landfill is an important component which prevent leachate migration and prevent groundwater contamination. Earthen liners have been widely used to contain waste materials in landfill. Liners and covers for municipal and hazardous waste containment facilities are often constructed with the use of fine-grained, low plasticity soils. Because of low permeability geosynthetic clay liners and compacted clay liners are the main materials used in waste disposal landfills. This paper summaries the important geotechnical characteristics such as hydraulic conductivity, liquid limit and free swell index of geosynthetic clay liner and compacted clay liner based on research findings. This paper also compares geosynthetic clay liner and compacted clay liner based on certain criteria such as thickness, availability of materials, vulnerability to damage etc.

Atomic force microscopy of chromatin arrays reveal non-monotonic salt dependence of array compaction in solution

PubMed Central

Krzemien, Katarzyna M.; Beckers, Maximilian; Quack, Salina; Michaelis, Jens

2017-01-01

Compaction of DNA in chromatin is a hallmark of the eukaryotic cell and unravelling its structure is required for an understanding of DNA involving processes. Despite strong experimental efforts, many questions concerning the DNA packing are open. In particular, it is heavily debated whether an ordered structure referred to as the “30 nm fibre” exist in vivo. Scanning probe microscopy has become a cutting edge technology for the high-resolution imaging of DNA- protein complexes. Here, we perform high-resolution atomic force microscopy of non-cross-linked chromatin arrays in liquid, under different salt conditions. A statistical analysis of the data reveals that array compaction is salt dependent in a non-monotonic fashion. A simple physical model can qualitatively explain the observed findings due to the opposing effects of salt dependent stiffening of DNA, nucleosome stability and histone-histone interactions. While for different salt concentrations different compaction states are observed, our data do not provide support for the existence of regular chromatin fibres. Our studies add new insights into chromatin structure, and with that contribute to a further understanding of the DNA condensation. PMID:28296908

Hidden secrets of deformation: Impact-induced compaction within a CV chondrite

NASA Astrophysics Data System (ADS)

Forman, L. V.; Bland, P. A.; Timms, N. E.; Collins, G. S.; Davison, T. M.; Ciesla, F. J.; Benedix, G. K.; Daly, L.; Trimby, P. W.; Yang, L.; Ringer, S. P.

2016-10-01

The CV3 Allende is one of the most extensively studied meteorites in worldwide collections. It is currently classified as S1-essentially unshocked-using the classification scheme of Stöffler et al. (1991), however recent modelling suggests the low porosity observed in Allende indicates the body should have undergone compaction-related deformation. In this study, we detail previously undetected evidence of impact through use of Electron Backscatter Diffraction mapping to identify deformation microstructures in chondrules, AOAs and matrix grains. Our results demonstrate that forsterite-rich chondrules commonly preserve crystal-plastic microstructures (particularly at their margins); that low-angle boundaries in deformed matrix grains of olivine have a preferred orientation; and that disparities in deformation occur between chondrules, surrounding and non-adjacent matrix grains. We find heterogeneous compaction effects present throughout the matrix, consistent with a highly porous initial material. Given the spatial distribution of these crystal-plastic deformation microstructures, we suggest that this is evidence that Allende has undergone impact-induced compaction from an initially heterogeneous and porous parent body. We suggest that current shock classifications (Stöffler et al., 1991) relying upon data from chondrule interiors do not constrain the complete shock history of a sample.

A recipe for echoes from exotic compact objects

NASA Astrophysics Data System (ADS)

Mark, Zachary; Zimmerman, Aaron; Du, Song Ming; Chen, Yanbei

2017-10-01

Gravitational wave astronomy provides an unprecedented opportunity to test the nature of black holes and search for exotic, compact alternatives. Recent studies have shown that exotic compact objects (ECOs) can ring down in a manner similar to black holes, but can also produce a sequence of distinct pulses resembling the initial ringdown. These "echoes" would provide definite evidence for the existence of ECOs. In this work we study the generation of these echoes in a generic, parametrized model for the ECO, using Green's functions. We show how to reprocess radiation in the near-horizon region of a Schwarzschild black hole into the asymptotic radiation from the corresponding source in an ECO spacetime. Our methods allow us to understand the connection between distinct echoes and ringing at the resonant frequencies of the compact object. We find that the quasinormal mode ringing in the black hole spacetime plays a central role in determining the shape of the first few echoes. We use this observation to develop a simple template for echo waveforms. This template preforms well over a variety of ECO parameters, and with improvements may prove useful in the analysis of gravitational waves.

Blackfolds, plane waves and minimal surfaces

NASA Astrophysics Data System (ADS)

Armas, Jay; Blau, Matthias

2015-07-01

Minimal surfaces in Euclidean space provide examples of possible non-compact horizon geometries and topologies in asymptotically flat space-time. On the other hand, the existence of limiting surfaces in the space-time provides a simple mechanism for making these configurations compact. Limiting surfaces appear naturally in a given space-time by making minimal surfaces rotate but they are also inherent to plane wave or de Sitter space-times in which case minimal surfaces can be static and compact. We use the blackfold approach in order to scan for possible black hole horizon geometries and topologies in asymptotically flat, plane wave and de Sitter space-times. In the process we uncover several new configurations, such as black helicoids and catenoids, some of which have an asymptotically flat counterpart. In particular, we find that the ultraspinning regime of singly-spinning Myers-Perry black holes, described in terms of the simplest minimal surface (the plane), can be obtained as a limit of a black helicoid, suggesting that these two families of black holes are connected. We also show that minimal surfaces embedded in spheres rather than Euclidean space can be used to construct static compact horizons in asymptotically de Sitter space-times.

Macrophages influence a competition of contact guidance and chemotaxis for fibroblast alignment in a fibrin gel coculture assay.

PubMed

Bromberek, B A; Enever, P A J; Shreiber, D I; Caldwell, M D; Tranquillo, R T

2002-05-01

Rat dermal fibroblasts were dispersed initially in the outer shell of a fibrin gel sphere, while the inner core either was devoid of cells or contained peritoneal exudate cells (primarily macrophages), thereby mimicking the inflammatory phase of wound healing. The fibroblasts compacted floating fibrin microspheres over time. In the absence of macrophages, the initial distribution of fibroblasts (only in the shell) induced circumferential alignment of fibrin fibrils via compaction of the shell relative to the core. The aligned fibrils created a contact guidance field, which was manifested by strong circumferential alignment of the fibroblasts. However, in the presence of macrophages, the fibroblasts exhibited more radial alignment despite the simultaneous contact guidance field in the circumferential direction associated with compaction. This was attributed to a chemotactic gradient emanating from the core due to a putative factor(s) released by the macrophages. The presence of a radial chemotactic stimulus was supported by the finding of even greater radial alignment when fibrin microspheres were embedded in an agarose-fibrin gel that abolished compaction and consequently the contact guidance field. Our assay permits the simulation of tissue morphogenetic processes that involve cell guidance phenomena and tractional restructuring of the extracellular matrix.

Tightly-wound miniknot vectors for gene therapy: a potential improvement over supercoiled minicircle DNA.

PubMed

Tolmachov, Oleg E

2010-04-01

Minimized derivatives of bacterial plasmids with removed bacterial backbones are promising vectors for the efficient delivery and for the long-term expression of therapeutic genes. The absence of the bacterial plasmid backbone, a known inducer of innate immune response and a known silencer of transgene expression, provides a partial explanation for the high efficiency of gene transfer using minimized DNA vectors. Supercoiled minicircle DNA is a type of minimized DNA vector obtained via intra-plasmid recombination in bacteria. Minicircle vectors seem to get an additional advantage from their physical compactness, which reduces DNA damage due to the mechanical stress during gene delivery. An independent topological means for DNA compression is knotting, with some knotted DNA isoforms offering superior compactness. I propose that, firstly, knotted DNA can be a suitable compact DNA form for the efficient transfection of a range of human cells with therapeutic genes, and, secondly, that knotted minimized DNA vectors without bacterial backbones ("miniknot" vectors) can surpass supercoiled minicircle DNA vectors in the efficiency of therapeutic gene delivery. Crucially, while the introduction of a single nick to a supercoiled DNA molecule leads to the loss of the compact supercoiled status, the introduction of nicks to knotted DNA does not change knotting. Tight miniknot vectors can be readily produced by the direct action of highly concentrated type II DNA topoisomerase on minicircle DNA or, alternatively, by annealing of the 19-base cohesive ends of the minimized vectors confined within the capsids of Escherichia coli bacteriophage P2 or its satellite bacteriophage P4. After reaching the nucleoplasm of the target cell, the knotted DNA is expected to be unknotted through type II topoisomerase activity and thus to become available for transcription, chromosomal integration or episomal maintenance. The hypothesis can be tested by comparing the gene transfer efficiency achieved with the proposed miniknot vectors, the minicircle vectors described previously, knotted plasmid vectors and standard plasmid vectors. Tightly-wound miniknots can be particularly useful in the gene administration procedures involving considerable forces acting on vector DNA: aerosol inhalation, jet-injection, electroporation, particle bombardment and ultrasound DNA transfer. (c) 2009 Elsevier Ltd. All rights reserved.

HIERARCHICAL STRUCTURE FORMATION AND MODES OF STAR FORMATION IN HICKSON COMPACT GROUP 31

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gallagher, S. C.; Durrell, P. R.; Elmegreen, D. M.

2010-02-15

The handful of low-mass, late-type galaxies that comprise Hickson Compact Group 31 (HCG 31) is in the midst of complex, ongoing gravitational interactions, evocative of the process of hierarchical structure formation at higher redshifts. With sensitive, multicolor Hubble Space Telescope imaging, we characterize the large population of < 10 Myr old star clusters (SCs) that suffuse the system. From the colors and luminosities of the young SCs, we find that the galaxies in HCG 31 follow the same universal scaling relations as actively star-forming galaxies in the local universe despite the unusual compact group environment. Furthermore, the specific frequency ofmore » the globular cluster system is consistent with the low end of galaxies of comparable masses locally. This, combined with the large mass of neutral hydrogen and tight constraints on the amount of intragroup light, indicate that the group is undergoing its first epoch of interaction-induced star formation. In both the main galaxies and the tidal-dwarf candidate, F, stellar complexes, which are sensitive to the magnitude of disk turbulence, have both sizes and masses more characteristic of z = 1-2 galaxies. After subtracting the light from compact sources, we find no evidence for an underlying old stellar population in F-it appears to be a truly new structure. The low-velocity dispersion of the system components, available reservoir of H I, and current star formation rate of {approx}10 M {sub sun} yr{sup -1} indicate that HCG 31 is likely to both exhaust its cold gas supply and merge within {approx}1 Gyr. We conclude that the end product will be an isolated, X-ray-faint, low-mass elliptical.« less

"Compacted" procedures for adults' simple addition: A review and critique of the evidence.

PubMed

Chen, Yalin; Campbell, Jamie I D

2018-04-01

We review recent empirical findings and arguments proffered as evidence that educated adults solve elementary addition problems (3 + 2, 4 + 1) using so-called compacted procedures (e.g., unconscious, automatic counting); a conclusion that could have significant pedagogical implications. We begin with the large-sample experiment reported by Uittenhove, Thevenot and Barrouillet (2016, Cognition, 146, 289-303), which tested 90 adults on the 81 single-digit addition problems from 1 + 1 to 9 + 9. They identified the 12 very-small addition problems with different operands both ≤ 4 (e.g., 4 + 3) as a distinct subgroup of problems solved by unconscious, automatic counting: These items yielded a near-perfectly linear increase in answer response time (RT) yoked to the sum of the operands. Using the data reported in the article, however, we show that there are clear violations of the sum-counting model's predictions among the very-small addition problems, and that there is no real RT boundary associated with addends ≤4. Furthermore, we show that a well-known associative retrieval model of addition facts-the network interference theory (Campbell, 1995)-predicts the results observed for these problems with high precision. We also review the other types of evidence adduced for the compacted procedure theory of simple addition and conclude that these findings are unconvincing in their own right and only distantly consistent with automatic counting. We conclude that the cumulative evidence for fast compacted procedures for adults' simple addition does not justify revision of the long-standing assumption that direct memory retrieval is ultimately the most efficient process of simple addition for nonzero problems, let alone sufficient to recommend significant changes to basic addition pedagogy.

Impedance of curved rectangular spiral coils around a conductive cylinder

NASA Astrophysics Data System (ADS)

Burke, S. K.; Ditchburn, R. J.; Theodoulidis, T. P.

2008-07-01

Eddy-current induction due to a thin conformable coil wrapped around a long conductive cylinder is examined using a second-order vector potential formalism. Compact closed-form expressions are derived for the self- and mutual impedances of curved rectangular spiral coils (i) in free space and (ii) when wrapped around the surface of the cylindrical rod. The validity of these expressions was tested against the results of a systematic series of experiments using a cylindrical Al-alloy rod and conformable coils manufactured using flexible printed-circuit-board technology. The theoretical expressions were in very good agreement with the experimental measurements. The significance of the results for eddy-current nondestructive inspection using flexible coils and flexible coil arrays is discussed.

Evaluation of effects of geometrical parameters on density distribution in compaction of PM gears

NASA Astrophysics Data System (ADS)

Khodaee, Alireza; Melander, Arne

2017-10-01

The usage of powder metallurgy (PM) for manufacturing of transmission components in automotive industries has been studied by many researchers. PM components have become of interest in recent years due to advancements in post processing possibilities such as hot isostatic pressing (HIP). Still in many of the forming process routes for making components from PM materials, the compaction of the powder into green component is the first step. Compaction is required to put the powder into the near net shape of the desired component and it causes a density gradient in the body of the green component. Basically the friction between powder particles and between the powder particles and die walls are the well-known roots for such density gradients in the compacted component. Looking at forming of PM gears, the gradient in density is one of the most important roots of problems in the processing of PM gears as well. That is because making a gear with full density and no pores will be very costly if large density gradients exist in the green component. The purpose of this study is to find the possible relations between the gear geometry and the density gradients in the green component after compaction in addition to the friction effects. For this purpose several gears should be tested. To reduce the research costs, the finite element (FE) method is used. First a FE model of the compaction process is developed and verified. To investigate the relations between the density gradients and the gear parameters such as addendum diameter (da) and the face width (b) several gear geometries have been studied. The compaction of selected gears is simulated using the FE model. The simulations results which are the distribution of density in the green component are evaluated and discussed and conclusion are made based on them.

Heat Melt Compaction as an Effective Treatment for Eliminating Microorganisms from Solid Waste

NASA Technical Reports Server (NTRS)

Hummerick, Mary P.; Strayer, Richard F.; McCoy, Lashelle E.; Richards, Jeffrey T.; Ruby, Anna Maria; Wheeler, Ray; Fisher, John

2013-01-01

One of the technologies being tested at Ames Research Center as part of the logistics and repurposing project is heat melt compaction (HMC) of solid waste to reduce volume, remove water and render a biologically stable and safe product. Studies at Kennedy Space Center have focused on the efficacy of the heat melt compaction process for killing microorganisms in waste and specific compacter operation protocols, i.e., time and temperature required to achieve a sterile, stable product. The work. reported here includes a controlled study to examine the survival and potential re-growth of specific microorganisms over a 6-month period of storage after heating and compaction. Before heating and compaction, ersatz solid wastes were inoculated with Bacillus amyloliquefaciens and Rhodotorula mucilaginosa, previously isolated from recovered space shuttle mission food and packaging waste. Compacted HMC tiles were sampled for microbiological analysis at time points between 0 and 180 days of storage in a controlled environment chamber. In addition, biological indicator strips containing spores of Bacillus atrophaeus and Geobacillus stearothermophilus were imbedded in trash to assess the efficacy of the HMC process to achieve sterilization. Analysis of several tiles compacted at 180deg C for times of 40 minutes to over 2 hours detected organisms in all tile samples with the exception of one exposed to 180deg C for approximately 2 hours. Neither of the inoculated organisms was recovered, and the biological indicator strips were negative for growth in all tiles indicating at least local sterilization of tile areas. The findings suggest that minimum time/temperature combination is required for complete sterilization. Microbial analysis of tiles processed at lower temperatures from 130deg C-150deg C at varying times will be discussed, as well as analysis of the bacteria and fungi present on the compactor hardware as a result of exposure to the waste and the surrounding environment. The two organisms inoculated into the waste were among those isolated and identified from the HMC surfaces indicating the possibility of cross contamination.

The KMOS3D Survey: Rotating Compact Star-forming Galaxies and the Decomposition of Integrated Line Widths

NASA Astrophysics Data System (ADS)

Wisnioski, E.; Mendel, J. T.; Förster Schreiber, N. M.; Genzel, R.; Wilman, D.; Wuyts, S.; Belli, S.; Beifiori, A.; Bender, R.; Brammer, G.; Chan, J.; Davies, R. I.; Davies, R. L.; Fabricius, M.; Fossati, M.; Galametz, A.; Lang, P.; Lutz, D.; Nelson, E. J.; Momcheva, I.; Rosario, D.; Saglia, R.; Tacconi, L. J.; Tadaki, K.; Übler, H.; van Dokkum, P. G.

2018-03-01

Using integral field spectroscopy, we investigate the kinematic properties of 35 massive centrally dense and compact star-forming galaxies (SFGs; {log}{\\overline{M}}* [{M}ȯ ]=11.1, {log}({{{Σ }}}1{kpc}[{M}ȯ {kpc}}-2])> 9.5, {log}({M}* /{r}e1.5[{M}ȯ {kpc}}-1.5])> 10.3) at z ∼ 0.7–3.7 within the KMOS3D survey. We spatially resolve 23 compact SFGs and find that the majority are dominated by rotational motions with velocities ranging from 95 to 500 km s‑1. The range of rotation velocities is reflected in a similar range of integrated Hα line widths, 75–400 km s‑1, consistent with the kinematic properties of mass-matched extended galaxies from the full KMOS3D sample. The fraction of compact SFGs that are classified as “rotation-dominated” or “disklike” also mirrors the fractions of the full KMOS3D sample. We show that integrated line-of-sight gas velocity dispersions from KMOS3D are best approximated by a linear combination of their rotation and turbulent velocities with a lesser but still significant contribution from galactic-scale winds. The Hα exponential disk sizes of compact SFGs are, on average, 2.5 ± 0.2 kpc, 1–2× the continuum sizes, in agreement with previous work. The compact SFGs have a 1.4× higher active galactic nucleus (AGN) incidence than the full KMOS3D sample at fixed stellar mass with an average AGN fraction of 76%. Given their high and centrally concentrated stellar masses, as well as stellar-to-dynamical mass ratios close to unity, the compact SFGs are likely to have low molecular gas fractions and to quench on a short timescale unless replenished with inflowing gas. The rotation in these compact systems suggests that their direct descendants are rotating passive galaxies. Based on observations obtained at the Very Large Telescope (VLT) of the European Southern Observatory (ESO), Paranal, Chile (ESO program IDs 092A-0091, 093.A-0079, 094.A-0217, 095.A-0047, 096.A-0025, 097.A-0028, and 098.A-0045).

Bright compact bulges at intermediate redshifts

NASA Astrophysics Data System (ADS)

Sachdeva, Sonali; Saha, Kanak

2018-07-01

Studying bright (MB < -20), intermediate-redshift (0.4 < z< 1.0), disc-dominated (nB < 2.5) galaxies from Hubble Space Telescope/Advanced Camera for Surveys and Wide Field Camera 3 in Chandra Deep Field-South, in rest-frame B and I band, we found a new class of bulges that is brighter and more compact than ellipticals. We refer to them as `bright, compact bulges' (BCBs) - they resemble neither classical nor pseudo-bulges and constitute ˜12 per cent of the total bulge population at these redshifts. Examining free-bulge + disc decomposition sample and elliptical galaxy sample from Simard et al., we find that only ˜0.2 per cent of the bulges can be classified as BCBs in the local Universe. Bulge to total light ratio of disc galaxies with BCBs is (at ˜0.4) a factor of ˜2 and ˜4 larger than for those with classical and pseudo-bulges. BCBs are ˜2.5 and ˜6 times more massive than classical and pseudo-bulges. Although disc galaxies with BCBs host the most massive and dominant bulge type, their specific star formation rate is 1.5-2 times higher than other disc galaxies. This is contrary to the expectations that a massive compact bulge would lead to lower star formation rates. We speculate that our BCB host disc galaxies are descendant of massive, compact, and passive elliptical galaxies observed at higher redshifts. Those high-redshift ellipticals lack local counterparts and possibly evolved by acquiring a compact disc around them. The overall properties of BCBs support a picture of galaxy assembly in which younger discs are being accreted around massive pre-existing spheroids.

Antimicrobial photodynamic inactivation of Staphylococcus aureus biofilms in bone specimens using methylene blue, toluidine blue ortho and malachite green: An in vitro study.

PubMed

Rosa, Luciano Pereira; da Silva, Francine Cristina; Nader, Sumaia Alves; Meira, Giselle Andrade; Viana, Magda Souza

2015-05-01

To evaluate the in vitro effectiveness of APDI with a 660 nm laser combined with methylene blue (MB), toluidine blue ortho (TBO) and malachite green (MG) dyes to inactivate Staphylococcus aureus (ATCC 25923) biofilms in compact and cancellous bone specimens. Eighty specimens of compact and 80 of cancellous bone were contaminated with a standard suspension of the microorganism and incubated for 14 days at 37°C to form biofilms. After this period, the specimens were divided into groups (n=10) according to established treatment: PS-L- (control - no treatment); PSmb+L-, PStbo+L-, PSmg+L- (only MB, TBO or MG for 5 min in the dark); PS-L+ (only laser irradiation for 180 s); and APDImb, APDItbo and APDImg (APDI with MB, TBO or MG for 180 s). The findings were statistically analyzed by ANOVA at 5% significance levels. All experimental treatments showed significant reduction of log CFU/mL S. aureus biofilms when compared with the control group for compact and cancellous bones specimens; the APDI group's treatment was more effective. The APDI carried out for the compact specimens showed better results when compared with cancellous specimens at all times of application. For the group of compact bone, APDImg showed greater reductions in CFU/mL (4.46 log 10). In the group of cancellous bone, the greatest reductions were found in the APDImb group (3.06 log 10). APDI with methylene blue, toluidine blue ortho and malachite green dyes and a 660 nm laser proved to be effective in the inactivation of S. aureus biofilms formed in compact and cancellous bone. Copyright © 2015 Elsevier Ltd. All rights reserved.

In vitro effectiveness of antimicrobial photodynamic therapy (APDT) using a 660 nm laser and malachite green dye in Staphylococcus aureus biofilms arranged on compact and cancellous bone specimens.

PubMed

Rosa, Luciano Pereira; da Silva, Francine Cristina; Nader, Sumaia Alves; Meira, Giselle Andrade; Viana, Magda Souza

2014-11-01

The aim of this study was to evaluate the in vitro effectiveness of antimicrobial photodynamic therapy (APDT) using a 660 nm visible laser combined with malachite green (MG) dye in the inactivation of Staphylococcus aureus (ATCC 25923) biofilms formed within compact and cancellous bone specimens. Specimens of 80 compact bones and 80 cancellous bones were contaminated with a standard suspension of S. aureus and incubated for 14 days at 37 °C to allow for the formation of biofilms. The specimens were divided into the following groups (n = 10) according to the treatment conditions: PS-L - (control - no treatment), PS+L - (only MG for 5 min), PS-L + 90 (only laser irradiation for 90 s), PS-L + 180 (only laser irradiation for 180 s), PS-L + 300 (only laser irradiation for 300 s), APDT90 (APDT for 90 s), APDT180 (APDT for 180 s), and APDT300 (APDT for 300 s). The findings were statistically analyzed using an ANOVA 5%. All of the experimental groups were significantly different from the control group for both the compact and cancellous bone specimens. The compact bone specimens that received APDT treatment (for either 90, 180, or 300 s) showed reductions in the log10 CFU/ml of S. aureus by a magnitude of 4 log10. Cancellous bone specimens treated with 300 s of APDT showed the highest efficacy, and these specimens had a reduction in S. aureus CFU/ml by a factor of 3 log10. APDT treatment using these proposed parameters in combination with MG was effective at inactivating S. aureus biofilms in compact and cancellous bone specimens.

Effectiveness of antimicrobial photodynamic therapy using a 660 nm laser and methyline blue dye for inactivating Staphylococcus aureus biofilms in compact and cancellous bones: An in vitro study.

PubMed

Rosa, Luciano Pereira; Silva, Francine Cristina da; Nader, Sumaia Alves; Meira, Giselle Andrade; Viana, Magda Souza

2015-06-01

New therapeutic modalities such as antimicrobial photodynamic therapy (APDT) has been investigated in order to be a valid alternative to the treatment of infections caused by different microorganisms. This work evaluated the in vitro effectiveness of Antimicrobial Photodynamic Therapy (APDT) using 660 nm laser combined with methylene blue dye to inactivate Staphylococcus aureus (ATCC 25923) biofilms in compact and cancellous bones specimens. Eighty specimens of compact bone and 80 specimens of cancellous bone were contaminated with a standard suspension of S. aureus and incubated for 14 days at 37°C to induce the formation of biofilms. The specimens were then divided into groups (n = 10) according to the established treatment: PS-L- (control--no treatment), PS+L- (only AM for 5 min in the dark), PS-L+90 (only laser irradiation for 90 s), PS-L+180 (only laser irradiation for 180 s), PS-L+300 (only laser irradiation for 300 s), APDT90 (APDT for 90 s), APDT180 (APDT for 180 s), and APDT300 (APDT for 300 s). The findings were statistically analyzed by ANOVA 5%. All of the experimental treatments showed a significant reduction (log 10 CFU/mL) of S. aureus biofilms in compact and cancellous bones specimens compared with the control group, and the APDT group was the most effective. Compact specimens treated with APDT showed the greatest reduction in biofilms compared with cancellous specimens, regardless of length of treatment. APDT with methylene blue dye and a 660 nm laser proved to be effective in inactivating S. aureus biofilms formed in compact and cancellous bone. Copyright © 2015 Elsevier B.V. All rights reserved.

Drosophila Casein Kinase I Alpha Regulates Homolog Pairing and Genome Organization by Modulating Condensin II Subunit Cap-H2 Levels

PubMed Central

Nguyen, Huy Q.; Nye, Jonathan; Buster, Daniel W.; Klebba, Joseph E.; Rogers, Gregory C.; Bosco, Giovanni

2015-01-01

The spatial organization of chromosomes within interphase nuclei is important for gene expression and epigenetic inheritance. Although the extent of physical interaction between chromosomes and their degree of compaction varies during development and between different cell-types, it is unclear how regulation of chromosome interactions and compaction relate to spatial organization of genomes. Drosophila is an excellent model system for studying chromosomal interactions including homolog pairing. Recent work has shown that condensin II governs both interphase chromosome compaction and homolog pairing and condensin II activity is controlled by the turnover of its regulatory subunit Cap-H2. Specifically, Cap-H2 is a target of the SCFSlimb E3 ubiquitin-ligase which down-regulates Cap-H2 in order to maintain homologous chromosome pairing, chromosome length and proper nuclear organization. Here, we identify Casein Kinase I alpha (CK1α) as an additional negative-regulator of Cap-H2. CK1α-depletion stabilizes Cap-H2 protein and results in an accumulation of Cap-H2 on chromosomes. Similar to Slimb mutation, CK1α depletion in cultured cells, larval salivary gland, and nurse cells results in several condensin II-dependent phenotypes including dispersal of centromeres, interphase chromosome compaction, and chromosome unpairing. Moreover, CK1α loss-of-function mutations dominantly suppress condensin II mutant phenotypes in vivo. Thus, CK1α facilitates Cap-H2 destruction and modulates nuclear organization by attenuating chromatin localized Cap-H2 protein. PMID:25723539

Evaluating the potential of SHI expression as a compacting tool for ornamental plants.

PubMed

Topp, Sine H; Rasmussen, Søren K

2012-05-01

Control of plant growth, especially elongation of stems, is important in modern plant production, and many plant species, including cereals, grasses, fruit trees and ornamentals, are regularly treated chemically to control their stature and flowering time. Chemical treatments ensure short, homogenous plants, which are more robust and easy to harvest, transport and sell. Although growth retardants are an expensive and undesirable step in plant production, it is unfortunately necessary at present. Compact growth is desirable in most ornamentals and this trait can be difficult to obtain by traditional breeding. As an alternative, biotechnology could provide plant varieties with optimized growth habits. This review is an introduction to the family of SHI transcription factors, which has recently been used to produce compact plants of very diverse species. The possible functions and regulations of the SHI proteins are discussed, and the potential of using overexpression as means to dwarf plants is assessed. In conclusion the breeding of some species, especially flowering ornamentals, could benefit from this strategy. Furthermore, detailed knowledge about the role of SHI proteins in plant growth and development could help shed more light on the interactions between plant hormone signaling pathways. © 2012 Elsevier Ireland Ltd. All rights reserved.

Effect of punch tip geometry and embossment on the punch tip adherence of a model ibuprofen formulation.

PubMed

Roberts, Matthew; Ford, James L; MacLeod, Graeme S; Fell, John T; Smith, George W; Rowe, Philip H; Dyas, A Mark

2004-07-01

The sticking of a model ibuprofen-lactose formulation with respect to compaction force, punch tip geometry and punch tip embossment was assessed. Compaction was performed at 10, 25 or 40 kN using an instrumented single-punch tablet press. Three sets of 'normal' concave punches were used to evaluate the influence of punch curvature and diameter. The punches were 10, 11 and 12 mm in diameter, respectively. The 10-mm punch was embossed with a letter 'A' logo to assess the influence of an embossment on sticking. Flat-faced punches (12.5 mm) were used for comparison with the concave tooling. Surface profiles (Taylor Hobson Talysurf 120) of the upper punch faces were obtained to evaluate the surface quality of the tooling used. Following compaction, ibuprofen attached to the upper punch face was quantified by spectroscopy. Increasing punch curvature from flat-faced punches to concave decreased sticking. Altering punch diameter of the concave punches had no effect on sticking when expressed as microg mm(-2). The embossed letter 'A' logo increased sticking considerably owing to the probable concentration of shear stresses at the lateral faces of the embossed logo.

On the acoustic radiation modes of compact regular polyhedral arrays of independent loudspeakers.

PubMed

Pasqual, Alexander Mattioli; Martin, Vincent

2011-09-01

Compact spherical loudspeaker arrays can be used to provide control over their directivity pattern. Usually, this is made by adjusting the gains of preprogrammed spatial filters corresponding to a finite set of spherical harmonics, or to the acoustic radiation modes of the loudspeaker array. Unlike the former, the latter are closely related to the radiation efficiency of the source and span the subspace of the directivities it can produce. However, the radiation modes depend on frequency for arbitrary distributions of transducers on the sphere, which yields complex directivity filters. This work focuses on the most common loudspeaker array configurations, those following the regular shape of the Platonic solids. It is shown that the radiation modes of these sources are frequency independent, and simple algebraic expressions are derived for their radiation efficiencies. In addition, since such modes are vibration patterns driven by electrical signals, the transduction mechanism of compact multichannel sources is also investigated, which is an important issue, especially if the transducers interact inside a shared cabinet. For Platonic solid loudspeakers, it is shown that the common enclosure does not lead to directivity filters that depend on frequency. © 2011 Acoustical Society of America

Can Walking or Biking to Work Really Make a Difference? Compact Development, Observed Commuter Choice and Body Mass Index.

PubMed

Wojan, Timothy R; Hamrick, Karen S

2015-01-01

Promoting active commuting is viewed as one strategy to increase physical activity and improve the energy balance of more sedentary individuals thereby improving health outcomes. However, the potential effectiveness of promotion policies may be seriously undermined by the endogenous choice of commute mode. Policy to promote active commuting will be most effective if it can be demonstrated that 1) those in compact cities do not necessarily have a preference for more physical activity, and 2) that current active commuting is not explained by unobserved characteristics that may be the true source of a lower body mass index (BMI). Daily time-use diaries are used in combination with geographical characteristics of where respondents live and work to test 1) whether residents of more compact settlements are characterized by higher activity levels; and 2) whether residents of more compact settlements are more likely to bike or walk to work. An endogenous treatment model of active commuting allows testing whether reductions in BMI associated with walking or biking to work are in fact attributable to that activity or are more strongly associated with unobserved characteristics of these active commuters. The analysis of general activity levels confirms that residents of more compact cities do not expend more energy than residents of more sprawling cities, indicating that those in compact cities do not necessarily have a preference for more physical activity. The endogenous treatment model is consistent with walking or biking to work having an independent effect on BMI, as unobserved factors that contribute to a higher likelihood of active commuting are not associated with lower BMI. Despite evidence that more compact settlement patterns enable active commuting, only a small share of workers in these areas choose to walk or bike to work. In general, the activity level of residents in more compact cities and residents in more sprawling areas is very similar. But, there is a robust association between active commuting and lower body mass index that is not explained by unobserved attributes or preferences suggests that policies to promote active commuting may be effective. In particular, active commuting has a greater effect on BMI. Consequently, compact settlement appears to be an effective infrastructure for promoting more active lifestyles. The policy challenge is finding ways to ensure that this infrastructure is more widely utilized.

Can Walking or Biking to Work Really Make a Difference? Compact Development, Observed Commuter Choice and Body Mass Index

PubMed Central

Wojan, Timothy R.; Hamrick, Karen S.

2015-01-01

Objectives Promoting active commuting is viewed as one strategy to increase physical activity and improve the energy balance of more sedentary individuals thereby improving health outcomes. However, the potential effectiveness of promotion policies may be seriously undermined by the endogenous choice of commute mode. Policy to promote active commuting will be most effective if it can be demonstrated that 1) those in compact cities do not necessarily have a preference for more physical activity, and 2) that current active commuting is not explained by unobserved characteristics that may be the true source of a lower body mass index (BMI). Methods Daily time-use diaries are used in combination with geographical characteristics of where respondents live and work to test 1) whether residents of more compact settlements are characterized by higher activity levels; and 2) whether residents of more compact settlements are more likely to bike or walk to work. An endogenous treatment model of active commuting allows testing whether reductions in BMI associated with walking or biking to work are in fact attributable to that activity or are more strongly associated with unobserved characteristics of these active commuters. Results The analysis of general activity levels confirms that residents of more compact cities do not expend more energy than residents of more sprawling cities, indicating that those in compact cities do not necessarily have a preference for more physical activity. The endogenous treatment model is consistent with walking or biking to work having an independent effect on BMI, as unobserved factors that contribute to a higher likelihood of active commuting are not associated with lower BMI. Conclusions Despite evidence that more compact settlement patterns enable active commuting, only a small share of workers in these areas choose to walk or bike to work. In general, the activity level of residents in more compact cities and residents in more sprawling areas is very similar. But, there is a robust association between active commuting and lower body mass index that is not explained by unobserved attributes or preferences suggests that policies to promote active commuting may be effective. In particular, active commuting has a greater effect on BMI. Consequently, compact settlement appears to be an effective infrastructure for promoting more active lifestyles. The policy challenge is finding ways to ensure that this infrastructure is more widely utilized. PMID:26154176

The North American long-term soil productivity experiment: findings from the first decade of research

Treesearch

Robert F. Powers; D. Andrew Scott; Felipe g. Sanchez; Richard A. Voldseth; Deborah Page-Dumroese; John D. Elioff; Douglas M. Stone

2005-01-01

First decade findings on the impacts of organic matter removal and soil compaction are reported for the 26 oldest installations in the nation-wide network of long-term soil productivity sites. Complete removal of surface organic matter led to declines in soil C concentration to 20 cm depth and to reduced nutrient availability. The effect is attributed mainly to the...

Unifying Model-Based and Reactive Programming within a Model-Based Executive

NASA Technical Reports Server (NTRS)

Williams, Brian C.; Gupta, Vineet; Norvig, Peter (Technical Monitor)

1999-01-01

Real-time, model-based, deduction has recently emerged as a vital component in AI's tool box for developing highly autonomous reactive systems. Yet one of the current hurdles towards developing model-based reactive systems is the number of methods simultaneously employed, and their corresponding melange of programming and modeling languages. This paper offers an important step towards unification. We introduce RMPL, a rich modeling language that combines probabilistic, constraint-based modeling with reactive programming constructs, while offering a simple semantics in terms of hidden state Markov processes. We introduce probabilistic, hierarchical constraint automata (PHCA), which allow Markov processes to be expressed in a compact representation that preserves the modularity of RMPL programs. Finally, a model-based executive, called Reactive Burton is described that exploits this compact encoding to perform efficIent simulation, belief state update and control sequence generation.

A surface-potential-based drain current compact model for a-InGaZnO thin-film transistors in Non-Degenerate conduction regime

NASA Astrophysics Data System (ADS)

Yu, Fei; Ma, Xiaoyu; Deng, Wanling; Liou, Juin J.; Huang, Junkai

2017-11-01

A physics-based drain current compact model for amorphous InGaZnO (a-InGaZnO) thin-film transistors (TFTs) is proposed. As a key feature, the surface potential model accounts for both exponential tail and deep trap densities of states, which are essential to describe a-InGaZnO TFT electrical characteristics. The surface potential is solved explicitly without the process of amendment and suitable for circuit simulations. Furthermore, based on the surface potential, an explicit closed-form expression of the drain current is developed. For the cases of the different operational voltages, surface potential and drain current are verified by numerical results and experimental data, respectively. As a result, our model can predict DC characteristics of a-InGaZnO TFTs.

The Hantzsche-Wendt manifold in cosmic topology

NASA Astrophysics Data System (ADS)

Aurich, R.; Lustig, S.

2014-08-01

The Hantzsche-Wendt space is one of the 17 multiply connected spaces of the three-dimensional Euclidean space {{{E}}^{3}}. It is a compact and orientable manifold which can serve as a model for a spatial finite universe. Since it possesses much fewer matched back-to-back circle pairs on the cosmic microwave background (CMB) sky than the other compact flat spaces, it can escape the detection by a search for matched circle pairs. The suppression of temperature correlations C(\\vartheta ) on large angular scales on the CMB sky is studied. It is shown that the large-scale correlations are of the same order as for the three-torus topology but express a much larger variability. The Hantzsche-Wendt manifold provides a topological possibility with reduced large-angle correlations that can hide from searches for matched back-to-back circle pairs.

Compact Q-balls and Q-shells in a scalar electrodynamics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Arodz, H.; Lis, J.

2009-02-15

We investigate spherically symmetric nontopological solitons in electrodynamics with a scalar field self-interaction U{approx}|{psi}| taken from the complex signum-Gordon model. We find Q-balls for small absolute values of the total electric charge Q, and Q-shells when |Q| is large enough. In both cases the charge density exactly vanishes outside certain compact regions in the three-dimensional space. The dependence of the total energy E of small Q-balls on the total electric charge has the form E{approx}|Q|{sup 5/6}, while in the case of very large Q-shells, E{approx}|Q|{sup 7/6}.

Towards Symbolic Model Checking for Multi-Agent Systems via OBDDs

NASA Technical Reports Server (NTRS)

Raimondi, Franco; Lomunscio, Alessio

2004-01-01

We present an algorithm for model checking temporal-epistemic properties of multi-agent systems, expressed in the formalism of interpreted systems. We first introduce a technique for the translation of interpreted systems into boolean formulae, and then present a model-checking algorithm based on this translation. The algorithm is based on OBDD's, as they offer a compact and efficient representation for boolean formulae.

Effect of eccentricity on searches for gravitational waves from coalescing compact binaries in ground-based detectors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Duncan A.; Zimmerman, Peter J.

2010-01-15

Inspiralling compact binaries are expected to circularize before their gravitational-wave signals reach the sensitive frequency band of ground-based detectors. Current searches for gravitational waves from compact binaries using the LIGO and Virgo detectors therefore use circular templates to construct matched filters. Binary formation models have been proposed which suggest that some systems detectable by the LIGO-Virgo network may have non-negligible eccentricity. We investigate the ability of the restricted 3.5 post-Newtonian order TaylorF2 template bank, used by LIGO and Virgo to search for gravitational waves from compact binaries with masses M{<=}35M{sub {center_dot},} to detect binaries with nonzero eccentricity. We model themore » gravitational waves from eccentric binaries using the x-model post-Newtonian formalism proposed by Hinder et al.[I. Hinder, F. Hermann, P. Laguna, and D. Shoemaker, arXiv:0806.1037v1]. We find that small residual eccentricities (e{sub 0} < or approx. 0.05 at 40 Hz) do not significantly affect the ability of current LIGO searches to detect gravitational waves from coalescing compact binaries with total mass 2M{sub {center_dot}<}M<15M{sub {center_dot}.} For eccentricities e{sub 0} > or approx. 0.1, the loss in matched filter signal-to-noise ratio due to eccentricity can be significant and so templates which include eccentric effects will be required to perform optimal searches for such systems.« less

H I absorption in nearby compact radio galaxies

NASA Astrophysics Data System (ADS)

Glowacki, M.; Allison, J. R.; Sadler, E. M.; Moss, V. A.; Curran, S. J.; Musaeva, A.; Deng, C.; Parry, R.; Sligo, M. C.

2017-05-01

H I absorption studies yield information on both active galactic nucleus (AGN) feeding and feedback processes. This AGN activity interacts with the neutral gas in compact radio sources, which are believed to represent the young or recently re-triggered AGN population. We present the results of a survey for H I absorption in a sample of 66 compact radio sources at 0.040 < z < 0.096 with the Australia Telescope Compact Array. In total, we obtained seven detections, five of which are new, with a large range of peak optical depths (3-87 per cent). Of the detections, 71 per cent exhibit asymmetric, broad (ΔvFWHM > 100 km s-1) features, indicative of disturbed gas kinematics. Such broad, shallow and offset features are also found within low-excitation radio galaxies which is attributed to disturbed circumnuclear gas, consistent with early-type galaxies typically devoid of a gas-rich disc. Comparing mid-infrared colours of our galaxies with H I detections indicates that narrow and deep absorption features are preferentially found in late-type and high-excitation radio galaxies in our sample. These features are attributed to gas in galactic discs. By combining XMM-Newton archival data with 21-cm data, we find support that absorbed X-ray sources may be good tracers of H I content within the host galaxy. This sample extends previous H I surveys in compact radio galaxies to lower radio luminosities and provides a basis for future work exploring the higher redshift universe.

Predicting gravitational lensing by stellar remnants

NASA Astrophysics Data System (ADS)

Harding, Alexander J.; Stefano, R. Di; Lépine, S.; Urama, J.; Pham, D.; Baker, C.

2018-03-01

Gravitational lensing provides a means to measure mass that does not rely on detecting and analysing light from the lens itself. Compact objects are ideal gravitational lenses, because they have relatively large masses and are dim. In this paper, we describe the prospects for predicting lensing events generated by the local population of compact objects, consisting of 250 neutron stars, five black holes, and ≈35 000 white dwarfs. By focusing on a population of nearby compact objects with measured proper motions and known distances from us, we can measure their masses by studying the characteristics of any lensing event they generate. Here, we concentrate on shifts in the position of a background source due to lensing by a foreground compact object. With Hubble Space Telescope, JWST, and Gaia, measurable centroid shifts caused by lensing are relatively frequent occurrences. We find that 30-50 detectable events per decade are expected for white dwarfs. Because relatively few neutron stars and black holes have measured distances and proper motions, it is more difficult to compute realistic rates for them. However, we show that at least one isolated neutron star has likely produced detectable events during the past several decades. This work is particularly relevant to the upcoming data releases by the Gaia mission and also to data that will be collected by JWST. Monitoring predicted microlensing events will not only help to determine the masses of compact objects, but will also potentially discover dim companions to these stellar remnants, including orbiting exoplanets.

INVISIBLE ACTIVE GALACTIC NUCLEI. II. RADIO MORPHOLOGIES AND FIVE NEW H i 21 cm ABSORPTION LINE DETECTORS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yan, Ting; Stocke, John T.; Darling, Jeremy

2016-03-15

This is the second paper directed toward finding new highly redshifted atomic and molecular absorption lines at radio frequencies. To this end, we selected a sample of 80 candidates for obscured radio-loud active galactic nuclei (AGNs) and presented their basic optical/near-infrared (NIR) properties in Paper I. In this paper, we present both high-resolution radio continuum images for all of these sources and H i 21 cm absorption spectroscopy for a few selected sources in this sample. A-configuration 4.9 and 8.5 GHz Very Large Array continuum observations find that 52 sources are compact or have substantial compact components with size <0.″5more » and flux densities >0.1 Jy at 4.9 GHz. The 36 most compact sources were then observed with the Very Long Baseline Array at 1.4 GHz. One definite and 10 candidate Compact Symmetric Objects (CSOs) are newly identified, which is a detection rate of CSOs ∼three times higher than the detection rate previously found in purely flux-limited samples. Based on possessing compact components with high flux densities, 60 of these sources are good candidates for absorption-line searches. Twenty-seven sources were observed for H i 21 cm absorption at their photometric or spectroscopic redshifts with only six detections (five definite and one tentative). However, five of these were from a small subset of six CSOs with pure galaxy optical/NIR spectra (i.e., any AGN emission is obscured) and for which accurate spectroscopic redshifts place the redshifted 21 cm line in a radio frequency intereference (RFI)-free spectral “window” (i.e., the percentage of H i 21 cm absorption-line detections could be as high as ∼90% in this sample). It is likely that the presence of ubiquitous RFI and the absence of accurate spectroscopic redshifts preclude H i detections in similar sources (only 1 detection out of the remaining 22 sources observed, 13 of which have only photometric redshifts); that is, H i absorption may well be present but is masked by the RFI. Future searches for highly redshifted H i and molecular absorption can easily find more distant CSOs among bright, “blank field” radio sources, but will be severely hampered by an inability to determine accurate spectroscopic redshifts due to their lack of rest-frame UV continuum.« less

ALMA reveals starburst-like interstellar medium conditions in a compact star-forming galaxy at z 2 using [CI] and CO

NASA Astrophysics Data System (ADS)

Popping, Gergö; Decarli, Roberto; Man, Allison W. S.; Nelson, Erica J.; Béthermin, Matthieu; De Breuck, Carlos; Mainieri, Vincenzo; van Dokkum, Pieter G.; Gullberg, Bitten; van Kampen, Eelco; Spaans, Marco; Trager, Scott C.

2017-06-01

We present ALMA detections of the [CI] 1-0, CO J = 3-2, and CO J = 4-3 emission lines, as well as the ALMA band 4 continuum for a compact star-forming galaxy (cSFG) at z = 2.225, 3D-HST GS30274. As is typical for cSFGs, this galaxy has a stellar mass of 1.89 ± 0.47 × 1011M⊙, with a star formation rate (SFR) of 214 ± 44 M⊙ yr-1 putting it on the star-forming "main-sequence", but with an H-band effective radius of 2.5 kpc, making it much smaller than the bulk of "main-sequence" star-forming galaxies. The intensity ratio of the line detections yield an ISM density ( 6 × 104 cm-3) and a UV-radiation field ( 2 × 104G0), similar to the values in local starburst and ultra-luminous infrared galaxy environments. A starburst phase is consistent with the short depletion times (tH2,dep ≤ 140 Myr) we find in 3D-HST GS30274 using three different proxies for the H2 mass ([CI], CO, dust mass). This depletion time is significantly shorter than in more extended SFGs with similar stellar masses and SFRs. Moreover, the gas fraction of 3D-HST GS30274 is smaller than typically found in extended galaxies. We measure the CO and [CI] kinematics and find a FWHM line width of 750 ± 41 km s-1. The CO and [CI] FWHM are consistent with a previously measured Hα FWHM for this source. The line widths are consistent with gravitational motions, suggesting we are seeing a compact molecular gas reservoir. A previous merger event, as suggested by the asymmetric light profile, may be responsible for the compact distribution of gas and has triggered a central starburst event. This event gives rise to the starburst-like ISM properties and short depletion times in 3D-HST GS30274. The centrally located and efficient star formation is quickly building up a dense core of stars, responsible for the compact distribution of stellar light in 3D-HST GS30274.

Histologic and immunohistochemical characteristics of cutaneous cysts in Goltz-Gorlin syndrome: clues for differentiation of nonsyndromic cysts.

PubMed

Tirado, Mariantonieta; Ständer, Sonja; Metze, Dieter

2014-11-01

Goltz-Gorlin syndrome presents with multiple basal cell carcinomas, odontogenic keratocysts, and cutaneous cysts, among other manifestations. The cutaneous cysts have been described as both epidermoid cysts and keratocysts but were not further characterized. Light microscopic examinations were made on 23 cutaneous cysts in 4 patients associated with Goltz-Gorlin syndrome located on extremities, face, trunk, palms, and soles and compared with nonsyndromic vellus hair cysts, steatocystomas, and hybrid cysts. Twenty-one of the syndromic cysts revealed alternating infundibular-like and steatocystoma-like squamous epitheliums in varying proportions. The cysts were lined by both smooth and corrugated squamous epithelium. The horny layer was composed by alternating areas of thin, lamellate, and compact eosinophilic keratin. Only 2 cases showed an exclusive steatocystoma-like type of epithelium very similar to odontogenic keratocysts. Sebaceous glands and follicular structures were absent. There were no differences between palmar and plantar cysts and other anatomic locations. The ultrastructural findings in syndromatic cysts confirmed variable expression of keratohyalin granules. Only 3 of 6 cases of nonsyndromic hybrid cysts showed overlapping features with syndromic cysts. Immunohistochemical profiling of keratin, involucrin, filaggrin, loricrin, and BCL-2 expression in syndromatic cysts showed exclusive positivity of K19 and continuous staining for BCL-2. In summary, 2 types of cutaneous cysts are characteristic of Goltz-Gorlin, irrelevant of their anatomic location, namely steatocystoma-like and more frequently hybrid-like. The diagnosis of syndromic hybrid-like cysts should be considered whenever infundibular and steatocystoma differentiation alternate and overlap. Altogether, these findings in epithelial cysts may raise the suspicion of Goltz-Gorlin as an underlying cause.

A biclustering algorithm for extracting bit-patterns from binary datasets.

PubMed

Rodriguez-Baena, Domingo S; Perez-Pulido, Antonio J; Aguilar-Ruiz, Jesus S

2011-10-01

Binary datasets represent a compact and simple way to store data about the relationships between a group of objects and their possible properties. In the last few years, different biclustering algorithms have been specially developed to be applied to binary datasets. Several approaches based on matrix factorization, suffix trees or divide-and-conquer techniques have been proposed to extract useful biclusters from binary data, and these approaches provide information about the distribution of patterns and intrinsic correlations. A novel approach to extracting biclusters from binary datasets, BiBit, is introduced here. The results obtained from different experiments with synthetic data reveal the excellent performance and the robustness of BiBit to density and size of input data. Also, BiBit is applied to a central nervous system embryonic tumor gene expression dataset to test the quality of the results. A novel gene expression preprocessing methodology, based on expression level layers, and the selective search performed by BiBit, based on a very fast bit-pattern processing technique, provide very satisfactory results in quality and computational cost. The power of biclustering in finding genes involved simultaneously in different cancer processes is also shown. Finally, a comparison with Bimax, one of the most cited binary biclustering algorithms, shows that BiBit is faster while providing essentially the same results. The source and binary codes, the datasets used in the experiments and the results can be found at: http://www.upo.es/eps/bigs/BiBit.html dsrodbae@upo.es Supplementary data are available at Bioinformatics online.

A novel feature extraction approach for microarray data based on multi-algorithm fusion

PubMed Central

Jiang, Zhu; Xu, Rong

2015-01-01

Feature extraction is one of the most important and effective method to reduce dimension in data mining, with emerging of high dimensional data such as microarray gene expression data. Feature extraction for gene selection, mainly serves two purposes. One is to identify certain disease-related genes. The other is to find a compact set of discriminative genes to build a pattern classifier with reduced complexity and improved generalization capabilities. Depending on the purpose of gene selection, two types of feature extraction algorithms including ranking-based feature extraction and set-based feature extraction are employed in microarray gene expression data analysis. In ranking-based feature extraction, features are evaluated on an individual basis, without considering inter-relationship between features in general, while set-based feature extraction evaluates features based on their role in a feature set by taking into account dependency between features. Just as learning methods, feature extraction has a problem in its generalization ability, which is robustness. However, the issue of robustness is often overlooked in feature extraction. In order to improve the accuracy and robustness of feature extraction for microarray data, a novel approach based on multi-algorithm fusion is proposed. By fusing different types of feature extraction algorithms to select the feature from the samples set, the proposed approach is able to improve feature extraction performance. The new approach is tested against gene expression dataset including Colon cancer data, CNS data, DLBCL data, and Leukemia data. The testing results show that the performance of this algorithm is better than existing solutions. PMID:25780277

A novel feature extraction approach for microarray data based on multi-algorithm fusion.

PubMed

Jiang, Zhu; Xu, Rong

2015-01-01

Feature extraction is one of the most important and effective method to reduce dimension in data mining, with emerging of high dimensional data such as microarray gene expression data. Feature extraction for gene selection, mainly serves two purposes. One is to identify certain disease-related genes. The other is to find a compact set of discriminative genes to build a pattern classifier with reduced complexity and improved generalization capabilities. Depending on the purpose of gene selection, two types of feature extraction algorithms including ranking-based feature extraction and set-based feature extraction are employed in microarray gene expression data analysis. In ranking-based feature extraction, features are evaluated on an individual basis, without considering inter-relationship between features in general, while set-based feature extraction evaluates features based on their role in a feature set by taking into account dependency between features. Just as learning methods, feature extraction has a problem in its generalization ability, which is robustness. However, the issue of robustness is often overlooked in feature extraction. In order to improve the accuracy and robustness of feature extraction for microarray data, a novel approach based on multi-algorithm fusion is proposed. By fusing different types of feature extraction algorithms to select the feature from the samples set, the proposed approach is able to improve feature extraction performance. The new approach is tested against gene expression dataset including Colon cancer data, CNS data, DLBCL data, and Leukemia data. The testing results show that the performance of this algorithm is better than existing solutions.

Tbx20 Transcription Factor Is a Downstream Mediator for Bone Morphogenetic Protein-10 in Regulating Cardiac Ventricular Wall Development and Function*

PubMed Central

Zhang, Wenjun; Chen, Hanying; Wang, Yong; Yong, Weidong; Zhu, Wuqiang; Liu, Yunlong; Wagner, Gregory R.; Payne, R. Mark; Field, Loren J.; Xin, Hongbo; Cai, Chen-Leng; Shou, Weinian

2011-01-01

Bone morphogenetic protein 10 (BMP10) belongs to the TGFβ-superfamily. Previously, we had demonstrated that BMP10 is a key regulator for ventricular chamber formation, growth, and maturation. Ablation of BMP10 leads to hypoplastic ventricular wall formation, and elevated levels of BMP10 are associated with abnormal ventricular trabeculation/compaction and wall maturation. However, the molecular mechanism(s) by which BMP10 regulates ventricle wall growth and maturation is still largely unknown. In this study, we sought to identify the specific transcriptional network that is potentially mediated by BMP10. We analyzed and compared the gene expression profiles between α-myosin heavy chain (αMHC)-BMP10 transgenic hearts and nontransgenic littermate controls using Affymetrix mouse exon arrays. T-box 20 (Tbx20), a cardiac transcription factor, was significantly up-regulated in αMHC-BMP10 transgenic hearts, which was validated by quantitative RT-PCR and in situ hybridization. Ablation of BMP10 reduced Tbx20 expression specifically in the BMP10-expressing region of the developing ventricle. In vitro promoter analysis demonstrated that BMP10 was able to induce Tbx20 promoter activity through a conserved Smad binding site in the Tbx20 promoter proximal region. Furthermore, overexpression of Tbx20 in myocardium led to dilated cardiomyopathy that exhibited ventricular hypertrabeculation and an abnormal muscular septum, which phenocopied genetically modified mice with elevated BMP10 levels. Taken together, our findings demonstrate that the BMP10-Tbx20 signaling cascade is important for ventricular wall development and maturation. PMID:21890625

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bekki, Kenji

We propose that there is an evolutionary link between ultra-compact blue dwarf galaxies (UCBDs) with active star formation and nucleated dwarfs based on the results of numerical simulations of dwarf–dwarf merging. We consider the observational fact that low-mass dwarfs can be very gas-rich, and thereby investigate the dynamical and chemical evolution of very gas-rich, dissipative dwarf–dwarf mergers. We find that the remnants of dwarf–dwarf mergers can be dominated by new stellar populations formed from the triggered starbursts and consequently can have blue colors and higher metallicities (Z ∼ [0.2–1]Z{sub ⊙}). We also find that the remnants of these mergers canmore » have rather high mass densities (10{sup 4} M{sub ⊙} pc{sup −3}) within the central 10 pc and small half-light radii (40−100 pc). The radial stellar structures of some merger remnants are similar to those of nucleated dwarfs. Star formation can continue in nuclear gas disks (R < 100 pc) surrounding stellar galactic nuclei (SGNs) so that the SGNs can finally have multiple stellar populations with different ages and metallicities. These very compact blue remnants can be identified as UCBDs soon after merging and as nucleated dwarfs after the young stars fade. We discuss these results in the context of the origins of metal-rich ultra-compact dwarfs and SGNs.« less

Closing the loop on elevation change at Summit, Greenland.

NASA Astrophysics Data System (ADS)

Hawley, R. L.; Brunt, K. M.; Neumann, T.; Waddington, E. D.

2016-12-01

Surface elevation on a large ice sheet changes due to multiplephysical processes, some of which imply mass change of the ice sheet,and some not. Accumulation of new snow, in absence of otherprocesses, will increase surface elevation as new mass is added to theice sheet. Compaction of snow and firn, both new and old, has atendency to decrease surface elevation, with no corresponding changein mass. As ice flows out to the sides on an ice sheet, conservationof mass dictates that the surface elevation will decrease,corresponding to mass loss. In response to long-term changes in mass,the continental crust on which the ice rests seeks isostatic balance,resulting (since the last glacial maximum) in an increase inelevation, with no associated mass change. The summation of theseprocesses results in net elevation change.We have measured elevation change along a 12 km transect at Summit,Greenland, monthly since 2007. Along the same transect we measuredthe burial rate of stakes to determine accumulation. We havepreviously measured firn compaction over a period of 4 years, and haverecently measured differential ice motion and the resulting strain.Over the course of the measurement period, we find no significantelevation change. We do, however, find intriguing periodicities inelevation. By combining our measurements of elevation, accumulation,firn compaction, and ice flow, we attempt to "close the loop" inattributing the long-term balance of surface elevation.

Gap junction disorders of myelinating cells.

PubMed

Kleopa, Kleopas A; Orthmann-Murphy, Jennifer; Sargiannidou, Irene

2010-01-01

Gap junctions (GJs) are channels that allow the diffusion of ions and small molecules across apposed cell membranes. In peripheral nerves, Schwann cells express the GJ proteins connexin32 (Cx32) and Cx29, which have distinct localizations. Cx32 forms GJs through non-compact myelin areas, whereas Cx29 forms hemichannels in the innermost layers of myelin apposing axonal Shaker-type K+ channels. In the CNS, rodent oligodendrocytes express Cx47, Cx32 and Cx29. Cx47 is expressed by all types of oligodendrocytes both in the white and grey matter and forms GJs on cell bodies and proximal processes, as well as most of the intercellular channels with astrocytes. Cx32 is expressed mostly by white matter oligodendrocytes and is localized in the myelin sheath of large diameter fibers. Cx29, and its human ortholog Cx31.3, appear to be restricted to oligodendrocytes that myelinate small caliber fibers, likely forming hemichannels. The importance of intercellular and intracellular GJs in myelinating cells are demonstrated by human disorders resulting from mutations affecting GJ proteins. The X-linked Charcot Marie Tooth disease (CMT1X) is caused by hundreds of mutations affecting Cx32. Patients with CMT1X present mainly with a progressive peripheral neuropathy, which may be accompanied by CNS myelin dysfunction. Mutations in Cx47 may cause a devastating leukodystrophy called Pelizaeus-Merzbacher-like disease or a milder spastic paraplegia. In addition, CNS demyelination may be caused by defects in genes expressing astrocytic GJ proteins, which are essential for oligodendrocytes. Findings from in vitro and in vivo models of these disorders developed over the last decade indicate that most mutations cause loss of function and an inability of the mutant connexins to form functional GJs. Here we review the clinical, genetic, and neurobiological aspects of GJ disorders affecting the PNS and CNS myelinating cells.

A regulatory toolbox of MiniPromoters to drive selective expression in the brain

PubMed Central

Portales-Casamar, Elodie; Swanson, Douglas J.; Liu, Li; de Leeuw, Charles N.; Banks, Kathleen G.; Ho Sui, Shannan J.; Fulton, Debra L.; Ali, Johar; Amirabbasi, Mahsa; Arenillas, David J.; Babyak, Nazar; Black, Sonia F.; Bonaguro, Russell J.; Brauer, Erich; Candido, Tara R.; Castellarin, Mauro; Chen, Jing; Chen, Ying; Cheng, Jason C. Y.; Chopra, Vik; Docking, T. Roderick; Dreolini, Lisa; D'Souza, Cletus A.; Flynn, Erin K.; Glenn, Randy; Hatakka, Kristi; Hearty, Taryn G.; Imanian, Behzad; Jiang, Steven; Khorasan-zadeh, Shadi; Komljenovic, Ivana; Laprise, Stéphanie; Liao, Nancy Y.; Lim, Jonathan S.; Lithwick, Stuart; Liu, Flora; Liu, Jun; Lu, Meifen; McConechy, Melissa; McLeod, Andrea J.; Milisavljevic, Marko; Mis, Jacek; O'Connor, Katie; Palma, Betty; Palmquist, Diana L.; Schmouth, Jean-François; Swanson, Magdalena I.; Tam, Bonny; Ticoll, Amy; Turner, Jenna L.; Varhol, Richard; Vermeulen, Jenny; Watkins, Russell F.; Wilson, Gary; Wong, Bibiana K. Y.; Wong, Siaw H.; Wong, Tony Y. T.; Yang, George S.; Ypsilanti, Athena R.; Jones, Steven J. M.; Holt, Robert A.; Goldowitz, Daniel; Wasserman, Wyeth W.; Simpson, Elizabeth M.

2010-01-01

The Pleiades Promoter Project integrates genomewide bioinformatics with large-scale knockin mouse production and histological examination of expression patterns to develop MiniPromoters and related tools designed to study and treat the brain by directed gene expression. Genes with brain expression patterns of interest are subjected to bioinformatic analysis to delineate candidate regulatory regions, which are then incorporated into a panel of compact human MiniPromoters to drive expression to brain regions and cell types of interest. Using single-copy, homologous-recombination “knockins” in embryonic stem cells, each MiniPromoter reporter is integrated immediately 5′ of the Hprt locus in the mouse genome. MiniPromoter expression profiles are characterized in differentiation assays of the transgenic cells or in mouse brains following transgenic mouse production. Histological examination of adult brains, eyes, and spinal cords for reporter gene activity is coupled to costaining with cell-type–specific markers to define expression. The publicly available Pleiades MiniPromoter Project is a key resource to facilitate research on brain development and therapies. PMID:20807748

Amorphous TiO 2 Compact Layers via ALD for Planar Halide Perovskite Photovoltaics

DOE PAGES

Kim, In Soo; Haasch, Richard T.; Cao, Duyen H.; ...

2016-09-06

A low temperature (< 120 °C) route to pinhole-free amorphous TiO 2 compact layers may pave the way to more efficient, flexible, and stable inverted perovskite halide device designs. Toward this end, we utilize low-temperature thermal atomic layer deposition (ALD) to synthesize ultra-thin (12 nm) compact TiO 2 underlayers for planar halide perovskite PV. While device performance with as-deposited TiO 2 films is poor, we identify room temperature UV-O 3 treatment as a route to device efficiency comparable to crystalline TiO 2 thin films synthesized by higher temperature methods. Here, we further explore the chemical, physical, and interfacial properties 2more » that might explain the improved performance through x-ray diffraction, spectroscopic ellipsometry, Raman spectroscopy, and x-ray photoelectron spectroscopy. These findings challenge our intuition about effective electron selective layers as well as point the way to a greater selection of flexible substrates and more stable inverted device designs.« less

A new direction for dark matter research: intermediate-mass compact halo objects

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chapline, George F.; Frampton, Paul H., E-mail: george.chapline@gmail.com, E-mail: paul.h.frampton@gmail.com

2016-11-01

The failure to find evidence for elementary particles that could serve as the constituents of dark matter brings to mind suggestions that dark matter might consist of massive compact objects (MACHOs). In particular, it has recently been argued that MACHOs with masses > 15 M {sub ⊙} may have been prolifically produced at the onset of the big bang. Although a variety of astrophysical signatures for primordial MACHOs with masses in this range have been discussed in the literature, we favor a strategy that uses the potential for magnification of stars outside our galaxy due to gravitational microlensing of thesemore » stars by MACHOs in the halo of our galaxy. We point out that the effect of the motion of the Earth on the shape of the micro-lensing brightening curves provides a promising approach to testing over the course of next several years the hypothesis that dark matter consists of massive compact objects.« less

Role of histone deacetylases in gene regulation at nuclear lamina.

PubMed

Milon, Beatrice C; Cheng, Haibo; Tselebrovsky, Mikhail V; Lavrov, Sergei A; Nenasheva, Valentina V; Mikhaleva, Elena A; Shevelyov, Yuri Y; Nurminsky, Dmitry I

2012-01-01

Theoretical models suggest that gene silencing at the nuclear periphery may involve "closing" of chromatin by transcriptional repressors, such as histone deacetylases (HDACs). Here we provide experimental evidence confirming these predictions. Histone acetylation, chromatin compactness, and gene repression in lamina-interacting multigenic chromatin domains were analyzed in Drosophila S2 cells in which B-type lamin, diverse HDACs, and lamina-associated proteins were downregulated by dsRNA. Lamin depletion resulted in decreased compactness of the repressed multigenic domain associated with its detachment from the lamina and enhanced histone acetylation. Our data reveal the major role for HDAC1 in mediating deacetylation, chromatin compaction, and gene silencing in the multigenic domain, and an auxiliary role for HDAC3 that is required for retention of the domain at the lamina. These findings demonstrate the manifold and central involvement of class I HDACs in regulation of lamina-associated genes, illuminating a mechanism by which these enzymes can orchestrate normal and pathological development.

An atlas of H-alpha-emitting regions in M33: A systematic search for SS433 star candidates

NASA Technical Reports Server (NTRS)

Calzetti, Daniela; Kinney, Anne L.; Ford, Holland; Doggett, Jesse; Long, Knox S.

1995-01-01

We report finding charts and accurate positions for 432 compact H-alpha emitting regions in the Local Group galaxy M 33 (NGC 598), in an effort to isolate candidates for an SS433-like stellar system. The objects were extracted from narrow band images, centered in the rest-frame H-alpha (lambda 6563 A) and in the red continuum at 6100 A. The atlas is complete down to V approximately equal to 20 and includes 279 compact HII regions and 153 line emitting point-like sources. The point-like sources undoubtedly include a variety of objects: very small HII regions, early type stars with intense stellar winds, and Wolf-Rayet stars, but should also contain objects with the characteristics of SS433. This extensive survey of compact H-alpha regions in M 33 is a first step towards the identification of peculiar stellar systems like SS433 in external galaxies.

Direct Conversion of Equine Adipose-Derived Stem Cells into Induced Neuronal Cells Is Enhanced in Three-Dimensional Culture.

PubMed

Petersen, Gayle F; Hilbert, Bryan J; Trope, Gareth D; Kalle, Wouter H J; Strappe, Padraig M

2015-12-01

The ability to culture neurons from horses may allow further investigation into equine neurological disorders. In this study, we demonstrate the generation of induced neuronal cells from equine adipose-derived stem cells (EADSCs) using a combination of lentiviral vector expression of the neuronal transcription factors Brn2, Ascl1, Myt1l (BAM) and NeuroD1 and a defined chemical induction medium, with βIII-tubulin-positive induced neuronal cells displaying a distinct neuronal morphology of rounded and compact cell bodies, extensive neurite outgrowth, and branching of processes. Furthermore, we investigated the effects of dimensionality on neuronal transdifferentiation, comparing conventional two-dimensional (2D) monolayer culture against three-dimensional (3D) culture on a porous polystyrene scaffold. Neuronal transdifferentiation was enhanced in 3D culture, with evenly distributed cells located on the surface and throughout the scaffold. Transdifferentiation efficiency was increased in 3D culture, with an increase in mean percent conversion of more than 100% compared to 2D culture. Additionally, induced neuronal cells were shown to transit through a Nestin-positive precursor state, with MAP2 and Synapsin 2 expression significantly increased in 3D culture. These findings will help to increase our understanding of equine neuropathogenesis, with prospective roles in disease modeling, drug screening, and cellular replacement for treatment of equine neurological disorders.

Nonlocal homogenization theory in metamaterials: Effective electromagnetic spatial dispersion and artificial chirality

NASA Astrophysics Data System (ADS)

Ciattoni, Alessandro; Rizza, Carlo

2015-05-01

We develop, from first principles, a general and compact formalism for predicting the electromagnetic response of a metamaterial with nonmagnetic inclusions in the long-wavelength limit, including spatial dispersion up to the second order. Specifically, by resorting to a suitable multiscale technique, we show that the effective medium permittivity tensor and the first- and second-order tensors describing spatial dispersion can be evaluated by averaging suitable spatially rapidly varying fields, each satisfying electrostatic-like equations within the metamaterial unit cell. For metamaterials with negligible second-order spatial dispersion, we exploit the equivalence of first-order spatial dispersion and reciprocal bianisotropic electromagnetic response to deduce a simple expression for the metamaterial chirality tensor. Such an expression allows us to systematically analyze the effect of the composite spatial symmetry properties on electromagnetic chirality. We find that even if a metamaterial is geometrically achiral, i.e., it is indistinguishable from its mirror image, it shows pseudo-chiral-omega electromagnetic chirality if the rotation needed to restore the dielectric profile after the reflection is either a 0∘ or 90∘ rotation around an axis orthogonal to the reflection plane. These two symmetric situations encompass two-dimensional and one-dimensional metamaterials with chiral response. As an example admitting full analytical description, we discuss one-dimensional metamaterials whose single chirality parameter is shown to be directly related to the metamaterial dielectric profile by quadratures.

Raman spectroscopy of femtosecond multipulse irradiation of vitreous silica: Experiment and simulation

NASA Astrophysics Data System (ADS)

Shcheblanov, N. S.; Povarnitsyn, M. E.; Mishchik, K. N.; Tanguy, A.

2018-02-01

We report an experimental and numerical study of femtosecond multipulse laser-induced densification in vitreous silica (v -SiO2 ) and its signature in Raman spectra. We compare the experimental findings to the recently developed molecular dynamics (MD) approach accounting for bond breaking due to laser irradiation, together with a dynamical matrix approach and bond polarizability model based on first-principles calculations for the estimation of Raman spectra. We observe two stages of the laser-induced densification and Raman spectrum evolution: growth during several hundreds of pulses followed by further saturation. At the medium range, the network connectivity change in v -SiO2 is expressed in reduction of the major ring fractions leading to more compacted structure. With the help of the Sen and Thorpe model, we also study the short-range order transformation and derive the interbonding Si-O-Si angle change from the Raman measurements. Experimental findings are in excellent agreement with our MD simulations and hence support a bond-breaking mechanism of laser-induced densification. Thus, our modeling explains well the laser-induced changes both in the short-range order caused by the appearance of Si coordination defects and medium-range order connected to evolution of the ring distribution. Finally, our findings disclose similarities between sheared, permanently densified, and laser-induced glass and suggest interesting future experiments in order to clarify the impact of the thermomechanical history on glasses under shear, cold and hot compression, and laser-induced densification.

Searching for the full symphony of black hole binary mergers

NASA Astrophysics Data System (ADS)

Harry, Ian; Bustillo, Juan Calderón; Nitz, Alex

2018-01-01

Current searches for the gravitational-wave signature of compact binary mergers rely on matched-filtering data from interferometric observatories with sets of modeled gravitational waveforms. These searches currently use model waveforms that do not include the higher-order mode content of the gravitational-wave signal. Higher-order modes are important for many compact binary mergers and their omission reduces the sensitivity to such sources. In this work we explore the sensitivity loss incurred from omitting higher-order modes. We present a new method for searching for compact binary mergers using waveforms that include higher-order mode effects, and evaluate the sensitivity increase that using our new method would allow. We find that, when evaluating sensitivity at a constant rate-of-false alarm, and when including the fact that signal-consistency tests can reject some signals that include higher-order mode content, we observe a sensitivity increase of up to a factor of 2 in volume for high mass ratio, high total-mass systems. For systems with equal mass, or with total mass ˜50 M⊙, we see more modest sensitivity increases, <10 %, which indicates that the existing search is already performing well. Our new search method is also directly applicable in searches for generic compact binaries.

Integrating laboratory creep compaction data with numerical fault models: A Bayesian framework

USGS Publications Warehouse

Fitzenz, D.D.; Jalobeanu, A.; Hickman, S.H.

2007-01-01

We developed a robust Bayesian inversion scheme to plan and analyze laboratory creep compaction experiments. We chose a simple creep law that features the main parameters of interest when trying to identify rate-controlling mechanisms from experimental data. By integrating the chosen creep law or an approximation thereof, one can use all the data, either simultaneously or in overlapping subsets, thus making more complete use of the experiment data and propagating statistical variations in the data through to the final rate constants. Despite the nonlinearity of the problem, with this technique one can retrieve accurate estimates of both the stress exponent and the activation energy, even when the porosity time series data are noisy. Whereas adding observation points and/or experiments reduces the uncertainty on all parameters, enlarging the range of temperature or effective stress significantly reduces the covariance between stress exponent and activation energy. We apply this methodology to hydrothermal creep compaction data on quartz to obtain a quantitative, semiempirical law for fault zone compaction in the interseismic period. Incorporating this law into a simple direct rupture model, we find marginal distributions of the time to failure that are robust with respect to errors in the initial fault zone porosity. Copyright 2007 by the American Geophysical Union.

ALMA view of a massive spheroid progenitor: a compact rotating core of molecular gas in an AGN host at z = 2.226

NASA Astrophysics Data System (ADS)

Talia, M.; Pozzi, F.; Vallini, L.; Cimatti, A.; Cassata, P.; Fraternali, F.; Brusa, M.; Daddi, E.; Delvecchio, I.; Ibar, E.; Liuzzo, E.; Vignali, C.; Massardi, M.; Zamorani, G.; Gruppioni, C.; Renzini, A.; Mignoli, M.; Pozzetti, L.; Rodighiero, G.

2018-05-01

We present ALMA observations at 107.291 GHz (band 3) and 214.532 GHz (band 6) of GMASS 0953, a star-forming galaxy at z = 2.226 hosting an obscured active galactic nucleus (AGN) that has been proposed as a progenitor of compact quiescent galaxies (QGs). We measure for the first time the size of the dust and molecular gas emission of GMASS 0953 that we find to be extremely compact (˜1 kpc). This result, coupled with a very high interstellar medium (ISM) density (n ˜ 105.5 cm-3), a low gas mass fraction (˜0.2), and a short gas depletion time-scale (˜150 Myr), implies that GMASS 0953 is experiencing an episode of intense star formation in its central region that will rapidly exhaust its gas reservoirs, likely aided by AGN-induced feedback, confirming its fate as a compact QG. Kinematic analysis of the CO(6-5) line shows evidence of rapidly rotating gas (Vrot = 320^{+92}_{-53} km s-1), as observed also in a handful of similar sources at the same redshift. On-going quenching mechanisms could either destroy the rotation or leave it intact leading the galaxy to evolve into a rotating QG.

INTRAGROUP AND GALAXY-LINKED DIFFUSE X-RAY EMISSION IN HICKSON COMPACT GROUPS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Desjardins, Tyler D.; Gallagher, Sarah C.; Tzanavaris, Panayiotis

2013-02-15

Isolated compact groups (CGs) of galaxies present a range of dynamical states, group velocity dispersions, and galaxy morphologies with which to study galaxy evolution, particularly the properties of gas both within the galaxies and in the intragroup medium. As part of a large, multiwavelength examination of CGs, we present an archival study of diffuse X-ray emission in a subset of nine Hickson compact groups (HCGs) observed with the Chandra X-Ray Observatory. We find that seven of the groups in our sample exhibit detectable diffuse emission. However, unlike large-scale emission in galaxy clusters, the diffuse features in the majority of themore » detected groups are linked to the individual galaxies, in the form of both plumes and halos likely as a result of vigourous star formation or activity in the galaxy nucleus, as well as in emission from tidal features. Unlike previous studies from earlier X-ray missions, HCGs 31, 42, 59, and 92 are found to be consistent with the L{sub X} -T relationship from clusters within the errors, while HCGs 16 and 31 are consistent with the cluster L{sub X} -{sigma} relation, though this is likely coincidental given that the hot gas in these two systems is largely due to star formation. We find that L{sub X} increases with decreasing group H I to dynamical-mass ratio with tentative evidence for a dependence in X-ray luminosity on H I morphology whereby systems with intragroup H I indicative of strong interactions are considerably more X-ray luminous than passively evolving groups. We also find a gap in the L{sub X} of groups as a function of the total group specific star formation rate. Our findings suggest that the hot gas in these groups is not in hydrostatic equilibrium and these systems are not low-mass analogs of rich groups or clusters, with the possible exception of HCG 62.« less

Intragroup and Galaxy-linked Diffuse X-ray Emission In Hickson Compact Groups

NASA Technical Reports Server (NTRS)

Desjardins, Tyler D.; Gallagher, Sarah C.; Tzanavaris, Panayiotis; Mulchaey, John S.; Brandt, William N.; Charlton, Jane C.; Garmire, Gordon P.; Gronwall, Caryl; Cardiff, Ann; Johnson, Kelsey E.;

Dynamic Decision Making under Uncertainty and Partial Information

DTIC Science & Technology

2013-11-14

integral under the natural filtration generated by the Brownian motions . This compact expression potentially enables us to design sub- optimal penalties...bounds on bermudan option price under jump diffusion processes. Quantitative Finance , 2013. Under review, available at http://arxiv.org/abs/1305.4321... Finance , 19:53 – 71, 2009. [3] D.P. Bertsekas. Dynamic Programming and Optimal Control. Athena Scientific, 4th edition, 2012. [4] D.B. Brown and J.E

Analytic representation of FK/Fπ in two loop chiral perturbation theory

NASA Astrophysics Data System (ADS)

Ananthanarayan, B.; Bijnens, Johan; Friot, Samuel; Ghosh, Shayan

2018-05-01

We present an analytic representation of FK/Fπ as calculated in three-flavor two-loop chiral perturbation theory, which involves expressing three mass scale sunsets in terms of Kampé de Fériet series. We demonstrate how approximations may be made to obtain relatively compact analytic representations. An illustrative set of fits using lattice data is also presented, which shows good agreement with existing fits.

A Fourier analysis for a fast simulation algorithm. [for switching converters

NASA Technical Reports Server (NTRS)

King, Roger J.

1988-01-01

This paper presents a derivation of compact expressions for the Fourier series analysis of the steady-state solution of a typical switching converter. The modeling procedure for the simulation and the steady-state solution is described, and some desirable traits for its matrix exponential subroutine are discussed. The Fourier analysis algorithm was tested on a phase-controlled parallel-loaded resonant converter, providing an experimental confirmation.

Deriving all p-brane superalgebras via integrability

NASA Astrophysics Data System (ADS)

Grasso, D. T.; McArthur, I. N.

2018-03-01

In previous work we demonstrated that the enlarged super-Poincare algebras which underlie p-brane and D-brane actions in superstring theory can be directly determined based on the integrability of supersymmetry transformations assigned to fields appearing in Wess-Zumino terms. In that work we derived p-brane superalgebras for p = 2 and 3. Here we extend our previous results and give a compact expression for superalgebras for all valid p.

An Integral Spectral Representation of the Propagator for the Wave Equation in the Kerr Geometry

NASA Astrophysics Data System (ADS)

Finster, F.; Kamran, N.; Smoller, J.; Yau, S.-T.

2005-12-01

We consider the scalar wave equation in the Kerr geometry for Cauchy data which is smooth and compactly supported outside the event horizon. We derive an integral representation which expresses the solution as a superposition of solutions of the radial and angular ODEs which arise in the separation of variables. In particular, we prove completeness of the solutions of the separated ODEs.

Differential Lectin Binding Patterns Identify Distinct Heart Regions in Giant Danio (Devario aequipinnatus) and Zebrafish (Danio rerio) Hearts

PubMed Central

Manalo, Trina; May, Adam; Quinn, Joshua; Lafontant, Dominique S.; Shifatu, Olubusola; He, Wei; Gonzalez-Rosa, Juan M.; Burns, Geoffrey C.; Burns, Caroline E.; Burns, Alan R.; Lafontant, Pascal J.

2016-01-01

Lectins are carbohydrate-binding proteins commonly used as biochemical and histochemical tools to study glycoconjugate (glycoproteins, glycolipids) expression patterns in cells, tissues, including mammalian hearts. However, lectins have received little attention in zebrafish (Danio rerio) and giant danio (Devario aequipinnatus) heart studies. Here, we sought to determine the binding patterns of six commonly used lectins—wheat germ agglutinin (WGA), Ulex europaeus agglutinin, Bandeiraea simplicifolia lectin (BS lectin), concanavalin A (Con A), Ricinus communis agglutinin I (RCA I), and Lycopersicon esculentum agglutinin (tomato lectin)—in these hearts. Con A showed broad staining in the myocardium. WGA stained cardiac myocyte borders, with binding markedly stronger in the compact heart and bulbus. BS lectin, which stained giant danio coronaries, was used to measure vascular reconstruction during regeneration. However, BS lectin reacted poorly in zebrafish. RCA I stained the compact heart of both fish. Tomato lectin stained the giant danio, and while low reactivity was seen in the zebrafish ventricle, staining was observed in their transitional cardiac myocytes. In addition, we observed unique staining patterns in the developing zebrafish heart. Lectins’ ability to reveal differential glycoconjugate expression in giant danio and zebrafish hearts suggests they can serve as simple but important tools in studies of developing, adult, and regenerating fish hearts. PMID:27680670

Arabidopsis RNA Polymerase V Mediates Enhanced Compaction and Silencing of Geminivirus and Transposon Chromatin during Host Recovery from Infection.

PubMed

Coursey, Tami; Regedanz, Elizabeth; Bisaro, David M

2018-04-01

Plants employ RNA-directed DNA methylation (RdDM) and dimethylation of histone 3 lysine 9 (H3K9me2) to silence geminiviruses and transposable elements (TEs). We previously showed that canonical RdDM (Pol IV-RdDM) involving RNA polymerases IV and V (Pol IV and Pol V) is required for Arabidopsis thaliana to recover from infection with Beet curly top virus lacking a suppressor protein that inhibits methylation (BCTV L2 - ). Recovery, which is characterized by reduced viral DNA levels and symptom remission, allows normal floral development. Here, we used formaldehyde-assisted isolation of regulatory elements (FAIRE) to confirm that >90% of BCTV L2 - chromatin is highly compacted during recovery, and a micrococcal nuclease-chromatin immunoprecipitation assay showed that this is largely due to increased nucleosome occupancy. Physical compaction correlated with augmented cytosine and H3K9 methylation and with reduced viral gene expression. We additionally demonstrated that these phenomena are dependent on Pol V and by extension the Pol IV-RdDM pathway. BCTV L2 - was also used to evaluate the impact of viral infection on host loci, including repressed retrotransposons Ta3 and Athila6A Remarkably, an unexpected Pol V-dependent hypersuppression of these TEs was observed, resulting in transcript levels even lower than those detected in uninfected plants. Hypersuppression is likely to be especially important for natural recovery from wild-type geminiviruses, as viral L2 and AL2 proteins cause ectopic TE expression. Thus, Pol IV-RdDM targets both viral and TE chromatin during recovery, simultaneously silencing the majority of viral genomes and maintaining host genome integrity by enforcing tighter control of TEs in future reproductive tissues. IMPORTANCE In plants, RdDM pathways use small RNAs to target cytosine and H3K9 methylation, thereby silencing DNA virus genomes and transposable elements (TEs). Further, Pol IV-RdDM involving Pol IV and Pol V is a key aspect of host defense that can lead to recovery from geminivirus infection. Recovery is characterized by reduced viral DNA levels and symptom remission and thus allows normal floral development. Studies described here demonstrate that the Pol V-dependent enhanced viral DNA and histone methylation observed during recovery result in increased chromatin compaction and suppressed gene expression. In addition, we show that TE-associated chromatin is also targeted for hypersuppression during recovery, such that TE transcripts are reduced below the already low levels seen in uninfected plants. Thus, Pol IV-RdDM at once silences the majority of viral genomes and enforces a tight control over TEs which might otherwise jeopardize genome integrity in future reproductive tissue. Copyright © 2018 American Society for Microbiology.

Genetic control of inflorescence architecture during rice domestication

PubMed Central

Zhu, Zuofeng; Tan, Lubin; Fu, Yongcai; Liu, Fengxia; Cai, Hongwei; Xie, Daoxin; Wu, Feng; Wu, Jianzhong; Matsumoto, Takashi; Sun, Chuanqing

2013-01-01

Inflorescence architecture is a key agronomical factor determining grain yield, and thus has been a major target of cereal crop domestication. Transition from a spread panicle typical of ancestral wild rice (Oryza rufipogon Griff.) to the compact panicle of present cultivars (O. sativa L.) was a crucial event in rice domestication. Here we show that the spread panicle architecture of wild rice is controlled by a dominant gene, OsLG1, a previously reported SBP-domain transcription factor that controls rice ligule development. Association analysis indicates that a single-nucleotide polymorphism-6 in the OsLG1 regulatory region led to a compact panicle architecture in cultivars during rice domestication. We speculate that the cis-regulatory mutation can fine-tune the spatial expression of the target gene, and that selection of cis-regulatory mutations might be an efficient strategy for crop domestication. PMID:23884108

A deformation of Sasakian structure in the presence of torsion and supergravity solutions

NASA Astrophysics Data System (ADS)

Houri, Tsuyoshi; Takeuchi, Hiroshi; Yasui, Yukinori

2013-07-01

A deformation of Sasakian structure in the presence of totally skew-symmetric torsion is discussed on odd-dimensional manifolds whose metric cones are Kähler with torsion. It is shown that such a geometry inherits similar properties to those of Sasakian geometry. As their example, we present an explicit expression of local metrics. It is also demonstrated that our example of the metrics admits the existence of hidden symmetry described by non-trivial odd-rank generalized closed conformal Killing-Yano tensors. Furthermore, using these metrics as an ansatz, we construct exact solutions in five-dimensional minimal gauged/ungauged supergravity and 11-dimensional supergravity. Finally, the global structures of the solutions are discussed. We obtain regular metrics on compact manifolds in five dimensions, which give natural generalizations of Sasaki-Einstein manifolds Yp, q and La, b, c. We also briefly discuss regular metrics on non-compact manifolds in 11 dimensions.

Ionization correction factors for H II regions in blue compact dwarf galaxies

NASA Astrophysics Data System (ADS)

Holovatyi, V. V.; Melekh, B. Ya.

2002-08-01

Energy distributions in the spectra of the ionizing nuclei of H II regions beyond λ <= 91.2 nm were calculated. A grid of photoionization models of 270 H II regions was constructed. The free parameters of the model grid are the hydrogen density nH in the nebular gas, filling factor, energy Lc-spectrum of ionizing nuclei, and metallicity. The chemical composition from the studies of Izotov et al. were used for model grid initialization. The integral linear spectra calculated for the photoionization models were used to determine the concentration ne, temperatures Te of electrons, and ionic concentrations n(A+i)/n(H+) by the nebular gas diagnostic method. The averaged relative ionic abundances n(A+i)/n(H+) thus calculated were used to determine new expressions for ionization correction factors which we recommend for the determination of abundances in the H II regions of blue compact dwarf galaxies.

The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling.

PubMed

Su, Ting; Cheng, Jingdong; Sohmen, Daniel; Hedman, Rickard; Berninghausen, Otto; von Heijne, Gunnar; Wilson, Daniel N; Beckmann, Roland

2017-05-30

Interaction between the nascent polypeptide chain and the ribosomal exit tunnel can modulate the rate of translation and induce translational arrest to regulate expression of downstream genes. The ribosomal tunnel also provides a protected environment for initial protein folding events. Here, we present a 2.9 Å cryo-electron microscopy structure of a ribosome stalled during translation of the extremely compacted VemP nascent chain. The nascent chain forms two α-helices connected by an α-turn and a loop, enabling a total of 37 amino acids to be observed within the first 50-55 Å of the exit tunnel. The structure reveals how α-helix formation directly within the peptidyltransferase center of the ribosome interferes with aminoacyl-tRNA accommodation, suggesting that during canonical translation, a major role of the exit tunnel is to prevent excessive secondary structure formation that can interfere with the peptidyltransferase activity of the ribosome.

Simplification rules for birdtrack operators

NASA Astrophysics Data System (ADS)

Alcock-Zeilinger, J.; Weigert, H.

2017-05-01

This paper derives a set of easy-to-use tools designed to simplify calculations with birdtrack operators comprised of symmetrizers and antisymmetrizers. In particular, we present cancellation rules allowing one to shorten the birdtrack expressions of operators and propagation rules identifying the circumstances under which it is possible to propagate symmetrizers past antisymmetrizers and vice versa. We exhibit the power of these simplification rules by means of a short example in which we apply the tools derived in this paper on a typical operator that can be encountered in the representation theory of 𝖲𝖴 (N ) over the product space V⊗m. These rules form the basis for the construction of compact Hermitian Young projection operators and their transition operators addressed in companion papers [J. Alcock-Zeilinger and H. Weigert, "Compact Hermitian Young projection operators," e-print arXiv:1610.10088 [math-ph] and J. Alcock-Zeilinger and H. Weigert, "Transition operators," e-print arXiv:1610.08802 [math-ph

Sequential Notch activation regulates ventricular chamber development

PubMed Central

D'Amato, Gaetano; Luxán, Guillermo; del Monte-Nieto, Gonzalo; Martínez-Poveda, Beatriz; Torroja, Carlos; Walter, Wencke; Bochter, Matthew S.; Benedito, Rui; Cole, Susan; Martinez, Fernando; Hadjantonakis, Anna-Katerina; Uemura, Akiyoshi; Jiménez-Borreguero, Luis J.; de la Pompa, José Luis

2016-01-01

Ventricular chambers are essential for the rhythmic contraction and relaxation occurring in every heartbeat throughout life. Congenital abnormalities in ventricular chamber formation cause severe human heart defects. How the early trabecular meshwork of myocardial fibres forms and subsequently develops into mature chambers is poorly understood. We show that Notch signalling first connects chamber endocardium and myocardium to sustain trabeculation, and later coordinates ventricular patterning and compaction with coronary vessel development to generate the mature chamber, through a temporal sequence of ligand signalling determined by the glycosyltransferase manic fringe (MFng). Early endocardial expression of MFng promotes Dll4–Notch1 signalling, which induces trabeculation in the developing ventricle. Ventricular maturation and compaction require MFng and Dll4 downregulation in the endocardium, which allows myocardial Jag1 and Jag2 signalling to Notch1 in this tissue. Perturbation of this signalling equilibrium severely disrupts heart chamber formation. Our results open a new research avenue into the pathogenesis of cardiomyopathies. PMID:26641715

A geometrical upper bound on the inflaton range

NASA Astrophysics Data System (ADS)

Cicoli, Michele; Ciupke, David; Mayrhofer, Christoph; Shukla, Pramod

2018-05-01

We argue that in type IIB LVS string models, after including the leading order moduli stabilisation effects, the moduli space for the remaining flat directions is compact due the Calabi-Yau Kähler cone conditions. In cosmological applications, this gives an inflaton field range which is bounded from above, in analogy with recent results from the weak gravity and swampland conjectures. We support our claim by explicitly showing that it holds for all LVS vacua with h 1,1 = 3 obtained from 4-dimensional reflexive polytopes. In particular, we first search for all Calabi-Yau threefolds from the Kreuzer-Skarke list with h 1,1 = 2, 3 and 4 which allow for LVS vacua, finding several new LVS geometries which were so far unknown. We then focus on the h 1,1 = 3 cases and show that the Kähler cones of all toric hypersurface threefolds force the effective 1-dimensional LVS moduli space to be compact. We find that the moduli space size can generically be trans-Planckian only for K3 fibred examples.

A Comparison of EPI Sampling, Probability Sampling, and Compact Segment Sampling Methods for Micro and Small Enterprises

PubMed Central

Chao, Li-Wei; Szrek, Helena; Peltzer, Karl; Ramlagan, Shandir; Fleming, Peter; Leite, Rui; Magerman, Jesswill; Ngwenya, Godfrey B.; Pereira, Nuno Sousa; Behrman, Jere

2011-01-01

Finding an efficient method for sampling micro- and small-enterprises (MSEs) for research and statistical reporting purposes is a challenge in developing countries, where registries of MSEs are often nonexistent or outdated. This lack of a sampling frame creates an obstacle in finding a representative sample of MSEs. This study uses computer simulations to draw samples from a census of businesses and non-businesses in the Tshwane Municipality of South Africa, using three different sampling methods: the traditional probability sampling method, the compact segment sampling method, and the World Health Organization’s Expanded Programme on Immunization (EPI) sampling method. Three mechanisms by which the methods could differ are tested, the proximity selection of respondents, the at-home selection of respondents, and the use of inaccurate probability weights. The results highlight the importance of revisits and accurate probability weights, but the lesser effect of proximity selection on the samples’ statistical properties. PMID:22582004

The 26.3-h orbit and multiwavelength properties of the `redback' millisecond pulsar PSR J1306-40

NASA Astrophysics Data System (ADS)

Linares, Manuel

2018-01-01

We present the discovery of the variable optical and X-ray counterparts to the radio millisecond pulsar (MSP) PSR J1306-40, recently discovered by Keane et al. We find that both the optical and X-ray fluxes are modulated with the same period, which allows us to measure for the first time the orbital period Porb = 1.097 16[6] d. The optical properties are consistent with a main-sequence companion with spectral type G to mid K and, together with the X-ray luminosity (8.8 × 1031 erg s-1 in the 0.5-10 keV band, for a distance of 1.2 kpc), confirm the redback classification of this pulsar. Our results establish the binary nature of PSR J1306-40, which has the longest Porb among all known compact binary MSPs in the Galactic disc. We briefly discuss these findings in the context of irradiation and intrabinary shock emission in compact binary MSPs.

Selection of embryogenic sugarcane callus by image analysis.

PubMed

Honda, H; Ito, T; Yamada, J; Hanai, T; Matsuoka, M; Kobayashi, T

1999-01-01

In the cultivation of plant calli on solid media, two kinds of calli such as compact and friable calli, which are a bright yellow and a whitish clump, respectively, are often obtained. Distinction of these calli is of much importance in the regeneration step. The image analysis system associated with a Charge Coupled Device (CCD) camera and microscopy were used to distinguish sugarcane calli. The original images from compact and friable calli were input to a computer via an image analysis board. At first, the brightnesses of trichromatic colors, red (R), green (G) and blue (B), of each pixels were extracted and the average brightness value for each color was calculated. From these values of the trichromatic colors, compact and friable calli could not be clearly distinguished. Next, the brightness of yellow, Br(Y), and white, Br(W), were defined using Br(R), Br(G) and Br(B), and the difference between Br(Y) and Br(W), Br(Y-W), which can be used to express the yellowish grade, was calculated. When Br(Y-W) was determined from all pixels of the original images of both calli, the compact calli were found to be clearly distinguished from the friable calli by the frequency distributions of Br(Y-W). Average brightness center value, Av(C(Y-W)), was calculated from the frequency distributions. It was found that the calli with less than 10 units of Av(C(Y-W)) was never regenerated and a proportional relationship between Av(C(Y-W)) and the regeneration frequency of the callus line was obtained.

Coherent Lidar Activities at NASA Langley Research Center

NASA Technical Reports Server (NTRS)

Kavaya, Michael J.; Amzajerdian, Farzin; Koch, Grady J.; Singh, Upendra N.; Yu, Jirong

2007-01-01

NASA Langley Research Center has been developing and using coherent lidar systems for many years. The current projects at LaRC are the Global Wind Observing Sounder (GWOS) mission preparation, the Laser Risk Reduction Program (LRRP), the Instrument Incubator Program (IIP) compact, rugged Doppler wind lidar project, the Autonomous precision Landing and Hazard detection and Avoidance Technology (ALHAT) project for lunar landing, and the Skywalker project to find and use thermals to extend UAV flight time. These five projects encompass coherent lidar technology development; characterization, validation, and calibration facilities; compact, rugged packaging; computer simulation; trade studies; data acquisition, processing, and display development; system demonstration; and space mission design. This paper will further discuss these activities at LaRC.

Optimal design of compact spur gear reductions

NASA Technical Reports Server (NTRS)

Savage, M.; Lattime, S. B.; Kimmel, J. A.; Coe, H. H.

1992-01-01

The optimal design of compact spur gear reductions includes the selection of bearing and shaft proportions in addition to gear mesh parameters. Designs for single mesh spur gear reductions are based on optimization of system life, system volume, and system weight including gears, support shafts, and the four bearings. The overall optimization allows component properties to interact, yielding the best composite design. A modified feasible directions search algorithm directs the optimization through a continuous design space. Interpolated polynomials expand the discrete bearing properties and proportions into continuous variables for optimization. After finding the continuous optimum, the designer can analyze near optimal designs for comparison and selection. Design examples show the influence of the bearings on the optimal configurations.

Spin memory effect for compact binaries in the post-Newtonian approximation

NASA Astrophysics Data System (ADS)

Nichols, David A.

2017-04-01

The spin memory effect is a recently predicted relativistic phenomenon in asymptotically flat spacetimes that become nonradiative infinitely far in the past and future. Between these early and late times, the magnetic-parity part of the time integral of the gravitational-wave strain can undergo a nonzero change; this difference is the spin memory effect. Families of freely falling observers around an isolated source can measure this effect, in principle, and fluxes of angular momentum per unit solid angle (or changes in superspin charges) generate the effect. The spin memory effect had not been computed explicitly for astrophysical sources of gravitational waves, such as compact binaries. In this paper, we compute the spin memory in terms of a set of radiative multipole moments of the gravitational-wave strain. The result of this calculation allows us to establish the following results about the spin memory: (i) We find that the accumulation of the spin memory behaves in a qualitatively different way from that of the displacement memory effect for nonspinning, quasicircular compact binaries in the post-Newtonian approximation: the spin memory undergoes a large secular growth over the duration of the inspiral, whereas for the displacement effect this increase is small. (ii) The rate at which the spin memory grows is equivalent to a nonlinear, but nonoscillatory and nonhereditary effect in the gravitational waveform that had been previously calculated for nonspinning, quasicircular compact binaries. (iii) This rate of buildup of the spin memory could potentially be detected by future gravitational-wave detectors by carefully combining the measured waveforms from hundreds of gravitational-wave detections of compact binaries.

Compact whole-body fluorescent imaging of nude mice bearing EGFP expressing tumor

NASA Astrophysics Data System (ADS)

Chen, Yanping; Xiong, Tao; Chu, Jun; Yu, Li; Zeng, Shaoqun; Luo, Qingming

2005-01-01

Issue of tumor has been a hotspot of current medicine. It is important for tumor research to detect tumors bearing in animal models easily, fast, repetitively and noninvasivly. Many researchers have paid their increasing interests on the detecting. Some contrast agents, such as green fluorescent protein (GFP) and Discosoma red fluorescent protein (Dsred) were applied to enhance image quality. Three main kinds of imaging scheme were adopted to visualize fluorescent protein expressing tumors in vivo. These schemes based on fluorescence stereo microscope, cooled charge-coupled-device (CCD) or camera as imaging set, and laser or mercury lamp as excitation light source. Fluorescence stereo microscope, laser and cooled CCD are expensive to many institutes. The authors set up an inexpensive compact whole-body fluorescent imaging tool, which consisted of a Kodak digital camera (model DC290), fluorescence filters(B and G2;HB Optical, Shenyang, Liaoning, P.R. China) and a mercury 50-W lamp power supply (U-LH50HG;Olympus Optical, Japan) as excitation light source. The EGFP was excited directly by mercury lamp with D455/70 nm band-pass filter and fluorescence was recorded by digital camera with 520nm long-pass filter. By this easy operation tool, the authors imaged, in real time, fluorescent tumors growing in live mice. The imaging system is external and noninvasive. For half a year our experiments suggested the imaging scheme was feasible. Whole-body fluorescence optical imaging for fluorescent expressing tumors in nude mouse is an ideal tool for antitumor, antimetastatic, and antiangiogenesis drug screening.

The cell proliferation antigen Ki-67 organises heterochromatin

PubMed Central

Sobecki, Michal; Mrouj, Karim; Camasses, Alain; Parisis, Nikolaos; Nicolas, Emilien; Llères, David; Gerbe, François; Prieto, Susana; Krasinska, Liliana; David, Alexandre; Eguren, Manuel; Birling, Marie-Christine; Urbach, Serge; Hem, Sonia; Déjardin, Jérôme; Malumbres, Marcos; Jay, Philippe; Dulic, Vjekoslav; Lafontaine, Denis LJ; Feil, Robert; Fisher, Daniel

2016-01-01

Antigen Ki-67 is a nuclear protein expressed in proliferating mammalian cells. It is widely used in cancer histopathology but its functions remain unclear. Here, we show that Ki-67 controls heterochromatin organisation. Altering Ki-67 expression levels did not significantly affect cell proliferation in vivo. Ki-67 mutant mice developed normally and cells lacking Ki-67 proliferated efficiently. Conversely, upregulation of Ki-67 expression in differentiated tissues did not prevent cell cycle arrest. Ki-67 interactors included proteins involved in nucleolar processes and chromatin regulators. Ki-67 depletion disrupted nucleologenesis but did not inhibit pre-rRNA processing. In contrast, it altered gene expression. Ki-67 silencing also had wide-ranging effects on chromatin organisation, disrupting heterochromatin compaction and long-range genomic interactions. Trimethylation of histone H3K9 and H4K20 was relocalised within the nucleus. Finally, overexpression of human or Xenopus Ki-67 induced ectopic heterochromatin formation. Altogether, our results suggest that Ki-67 expression in proliferating cells spatially organises heterochromatin, thereby controlling gene expression. DOI: http://dx.doi.org/10.7554/eLife.13722.001 PMID:26949251

A Novel Method for Detection of Phosphorylation in Single Cells by Surface Enhanced Raman Scattering (SERS) using Composite Organic-Inorganic Nanoparticles (COINs)

PubMed Central

Shachaf, Catherine M.; Elchuri, Sailaja V.; Koh, Ai Leen; Zhu, Jing; Nguyen, Lienchi N.; Mitchell, Dennis J.; Zhang, Jingwu; Swartz, Kenneth B.; Sun, Lei; Chan, Selena; Sinclair, Robert; Nolan, Garry P.

2009-01-01

Background Detection of single cell epitopes has been a mainstay of immunophenotyping for over three decades, primarily using fluorescence techniques for quantitation. Fluorescence has broad overlapping spectra, limiting multiplexing abilities. Methodology/Principal Findings To expand upon current detection systems, we developed a novel method for multi-color immuno-detection in single cells using “Composite Organic-Inorganic Nanoparticles” (COINs) Raman nanoparticles. COINs are Surface-Enhanced Raman Scattering (SERS) nanoparticles, with unique Raman spectra. To measure Raman spectra in single cells, we constructed an automated, compact, low noise and sensitive Raman microscopy device (Integrated Raman BioAnalyzer). Using this technology, we detected proteins expressed on the surface in single cells that distinguish T-cells among human blood cells. Finally, we measured intracellular phosphorylation of Stat1 (Y701) and Stat6 (Y641), with results comparable to flow cytometry. Conclusions/Significance Thus, we have demonstrated the practicality of applying COIN nanoparticles for measuring intracellular phosphorylation, offering new possibilities to expand on the current fluorescent technology used for immunoassays in single cells. PMID:19367337

Normal stress differences from Oldroyd 8-constant framework: Exact analytical solution for large-amplitude oscillatory shear flow

NASA Astrophysics Data System (ADS)

Saengow, C.; Giacomin, A. J.

2017-12-01

The Oldroyd 8-constant framework for continuum constitutive theory contains a rich diversity of popular special cases for polymeric liquids. In this paper, we use part of our exact solution for shear stress to arrive at unique exact analytical solutions for the normal stress difference responses to large-amplitude oscillatory shear (LAOS) flow. The nonlinearity of the polymeric liquids, triggered by LAOS, causes these responses at even multiples of the test frequency. We call responses at a frequency higher than twice the test frequency higher harmonics. We find the new exact analytical solutions to be compact and intrinsically beautiful. These solutions reduce to those of our previous work on the special case of the corotational Maxwell fluid. Our solutions also agree with our new truncated Goddard integral expansion for the special case of the corotational Jeffreys fluid. The limiting behaviors of these exact solutions also yield new explicit expressions. Finally, we use our exact solutions to see how η∞ affects the normal stress differences in LAOS.

Development of a Multi-Band Shared Aperture Reflectarray/Reflector Antenna Design for NASA

NASA Technical Reports Server (NTRS)

Spence, Thomas; Cooley, Michael; Stenger, Peter; Park, Richard; Li, Lihua; Racette, Paul; Heymsfield, Gerald; Mclinden, Matthew

2016-01-01

A dual-band (Ka/W) shared-aperture antenna system design has been developed as a proposed solution to meet the needs of NASA's planned Aerosol, Clouds, and Ecosystem (ACE) mission. The design is comprised of a compact Cassegrain reflector/reflect array with a fixed W-band feed and a cross track scanned Ka-band Active Electronically Scanned Array (AESA). Critical Sub-scale prototype testing and flight tests have validated some of the key aspects of this innovative antenna design, including the low loss reflector/reflect array surface. More recently the science community has expressed interest in a mission that offers the ability to measure precipitation (Ku- band with scanning) in addition to clouds and aerosols. In this paper we present findings from a design study that explores options for realizing a tri-frequency (Ku/Ka/W), shared-aperture antenna system to meet these science objectives. Design considerations included meeting performance requirements while striving to minimize payload size, weight, prime power, and cost. The extensive trades and lessons learned from the ACE system development were utilized as the foundation for this work.

Phosphorylation-mediated PTEN conformational closure and deactivation revealed with protein semisynthesis

PubMed Central

Bolduc, David; Rahdar, Meghdad; Tu-Sekine, Becky; Sivakumaren, Sindhu Carmen; Raben, Daniel; Amzel, L Mario; Devreotes, Peter; Gabelli, Sandra B; Cole, Philip

2013-01-01

The tumor suppressor PIP3 phosphatase PTEN is phosphorylated on four clustered Ser/Thr on its C-terminal tail (aa 380–385) and these phosphorylations are proposed to induce a reduction in PTEN’s plasma membrane recruitment. How these phosphorylations affect the structure and enzymatic function of PTEN is poorly understood. To gain insight into the mechanistic basis of PTEN regulation by phosphorylation, we generated semisynthetic site-specifically tetra-phosphorylated PTEN using expressed protein ligation. By employing a combination of biophysical and enzymatic approaches, we have found that purified tail-phosphorylated PTEN relative to its unphosphorylated counterpart shows reduced catalytic activity and membrane affinity and undergoes conformational compaction likely involving an intramolecular interaction between its C-tail and the C2 domain. Our results suggest that there is a competition between membrane phospholipids and PTEN phospho-tail for binding to the C2 domain. These findings reveal a key aspect of PTEN’s regulation and suggest pharmacologic approaches for direct PTEN activation. DOI: http://dx.doi.org/10.7554/eLife.00691.001 PMID:23853711

Variation in the flowering gene SELF PRUNING 5G promotes day-neutrality and early yield in tomato.

PubMed

Soyk, Sebastian; Müller, Niels A; Park, Soon Ju; Schmalenbach, Inga; Jiang, Ke; Hayama, Ryosuke; Zhang, Lei; Van Eck, Joyce; Jiménez-Gómez, José M; Lippman, Zachary B

2017-01-01

Plants evolved so that their flowering is triggered by seasonal changes in day length. However, day-length sensitivity in crops limits their geographical range of cultivation, and thus modification of the photoperiod response was critical for their domestication. Here we show that loss of day-length-sensitive flowering in tomato was driven by the florigen paralog and flowering repressor SELF-PRUNING 5G (SP5G). SP5G expression is induced to high levels during long days in wild species, but not in cultivated tomato because of cis-regulatory variation. CRISPR/Cas9-engineered mutations in SP5G cause rapid flowering and enhance the compact determinate growth habit of field tomatoes, resulting in a quick burst of flower production that translates to an early yield. Our findings suggest that pre-existing variation in SP5G facilitated the expansion of cultivated tomato beyond its origin near the equator in South America, and they provide a compelling demonstration of the power of gene editing to rapidly improve yield traits in crop breeding.

Complete N-point superstring disk amplitude II. Amplitude and hypergeometric function structure

NASA Astrophysics Data System (ADS)

Mafra, Carlos R.; Schlotterer, Oliver; Stieberger, Stephan

2013-08-01

Using the pure spinor formalism in part I (Mafra et al., preprint [1]) we compute the complete tree-level amplitude of N massless open strings and find a striking simple and compact form in terms of minimal building blocks: the full N-point amplitude is expressed by a sum over (N-3)! Yang-Mills partial subamplitudes each multiplying a multiple Gaussian hypergeometric function. While the former capture the space-time kinematics of the amplitude the latter encode the string effects. This result disguises a lot of structure linking aspects of gauge amplitudes as color and kinematics with properties of generalized Euler integrals. In this part II the structure of the multiple hypergeometric functions is analyzed in detail: their relations to monodromy equations, their minimal basis structure, and methods to determine their poles and transcendentality properties are proposed. Finally, a Gröbner basis analysis provides independent sets of rational functions in the Euler integrals. In contrast to [1] here we use momenta redefined by a factor of i. As a consequence the signs of the kinematic invariants are flipped, e.g. |→|.

Experimental investigation on the miniature mixed refrigerant cooler driven by a mini-compressor

NASA Astrophysics Data System (ADS)

Chen, Gaofei; Gong, Maoqiong; Wu, Yinong

2018-05-01

Three miniature Joule-Thomson cryogenic coolers and a testing set up were built to investigate the cooling performance in this work. Shell-and-tube heat exchanger and plate fin heat exchangers with rectangular micro channels were designed to achieve high specific surface area. The main processing technology of micro mixed refrigerant cooler (MMRC) was described. The design and fabrication processing of the plate fin heat exchangers were also described. The new developed micro plate-fin type heat exchanger shows high compactness with the specific heat surface larger than 1.0x104 m2/m3. The results of experimental investigations on miniature mixed refrigerant J-T cryogenic coolers driven by a Mini-Compressor were discussed. The performance evaluation and comparison of the three coolers was made to find out the features for each type of cooler. Expressions of refrigeration coefficient and exergy efficiency were pointed out. No-load temperature of about 112 K, and the cooling power of 4.0W at 118K with the input power of 120W is achieved. The exergy efficiency of the SJTC is 5.14%.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gergely, Laszlo Arpad; Department of Experimental Physics, University of Szeged, Dom ter 9, Szeged 6720; Department of Applied Science, London South Bank University, 103 Borough Road, London SE1 0AA

We give here a new third post-Newtonian (3PN) spin-spin contribution (in the PN parameter {epsilon}) to the accumulated orbital phase of a compact binary, arising from the spin-orbit precessional motion of the spins. In the equal mass case, this contribution vanishes, but Laser Interferometer Space Antenna (LISA) sources of merging supermassive binary black holes have typically a mass ratio of 1:10. For such nonequal masses, this 3PN correction is periodic in time, with a period approximately {epsilon}{sup -1} times larger than the period of gravitational waves. We derive a renormalized and simpler expression of the spin-spin coefficient at 2PN, asmore » an average over the time scale of this period of the combined 2PN and 3PN contribution. We also find that for LISA sources the quadrupole-monopole contribution to the phase dominates over the spin-spin contribution, while the self-spin contribution is negligible even for the dominant spin. Finally, we define a renormalized total spin coefficient {sigma} to be employed in the search for gravitational waves emitted by LISA sources.« less

Exploring mechanisms of compaction in salt-marsh sediments using Common Era relative sea-level reconstructions

NASA Astrophysics Data System (ADS)

Brain, Matthew J.; Kemp, Andrew C.; Hawkes, Andrea D.; Engelhart, Simon E.; Vane, Christopher H.; Cahill, Niamh; Hill, Troy D.; Donnelly, Jeffrey P.; Horton, Benjamin P.

2017-07-01

Salt-marsh sediments provide precise and near-continuous reconstructions of Common Era relative sea level (RSL). However, organic and low-density salt-marsh sediments are prone to compaction processes that cause post-depositional distortion of the stratigraphic column used to reconstruct RSL. We compared two RSL reconstructions from East River Marsh (Connecticut, USA) to assess the contribution of mechanical compression and biodegradation to compaction of salt-marsh sediments and their subsequent influence on RSL reconstructions. The first, existing reconstruction ('trench') was produced from a continuous sequence of basal salt-marsh sediment and is unaffected by compaction. The second, new reconstruction is from a compaction-susceptible core taken at the same location. We highlight that sediment compaction is the only feasible mechanism for explaining the observed differences in RSL reconstructed from the trench and core. Both reconstructions display long-term RSL rise of ∼1 mm/yr, followed by a ∼19th Century acceleration to ∼3 mm/yr. A statistically-significant difference between the records at ∼1100 to 1800 CE could not be explained by a compression-only geotechnical model. We suggest that the warmer and drier conditions of the Medieval Climate Anomaly (MCA) resulted in an increase in sediment compressibility during this time period. We adapted the geotechnical model by reducing the compressive strength of MCA sediments to simulate this softening of sediments. 'Decompaction' of the core reconstruction with this modified model accounted for the difference between the two RSL reconstructions. Our results demonstrate that compression-only geotechnical models may be inadequate for estimating compaction and post-depositional lowering of susceptible organic salt-marsh sediments in some settings. This has important implications for our understanding of the drivers of sea-level change. Further, our results suggest that future climate changes may make salt marshes more susceptible to the impacts of RSL rise by enhancing sediment compressibility. We stress, however, that the cause of the softening remains enigmatic. Until this is better constrained, it is premature to widely extrapolate our findings to existing core-based reconstructions of Holocene RSL.

Applicability of recycled aggregates in concrete piles for soft soil improvement.

PubMed

Medeiros-Junior, Ronaldo A; Balestra, Carlos Et; Lima, Maryangela G

2017-01-01

The expressive generation of construction and demolition waste is stimulating several studies for reusing this material. The improvement of soft soils by concrete compaction piles has been widely applied for 40 years in some Brazilian cities. This technique is used to improve the bearing capacity of soft soils, allowing executing shallow foundations instead of deep foundations. The compaction piles use a high volume of material. This article explored the possibility of using recycled aggregates from construction waste to replace the natural aggregates in order to improve the bearing capacity of the soft soil, regarding its compressive strength. Construction wastes from different stages of a construction were used in order to make samples of concrete with recycled aggregates. The strength of concretes with natural aggregates was compared with the strength of concretes with recycled (fine and coarse) aggregates. Results show that all samples met the minimum compressive strength specified for compaction piles used to improve the bearing capacity of soft soils. The concrete with recycled aggregate from the structural stage had even higher resistances than the concrete with natural aggregates. This behaviour was attributed to the large amount of cementitious materials in the composition of this type of concrete. It was also observed that concrete with recycled fine aggregate has a superior resistance to concrete with recycled coarse aggregate.

Low energy CMOS for space applications

NASA Technical Reports Server (NTRS)

Panwar, Ramesh; Alkalaj, Leon

1992-01-01

The current focus of NASA's space flight programs reflects a new thrust towards smaller, less costly, and more frequent space missions, when compared to missions such as Galileo, Magellan, or Cassini. Recently, the concept of a microspacecraft was proposed. In this concept, a small, compact spacecraft that weighs tens of kilograms performs focused scientific objectives such as imaging. Similarly, a Mars Lander micro-rover project is under study that will allow miniature robots weighing less than seven kilograms to explore the Martian surface. To bring the microspacecraft and microrover ideas to fruition, one will have to leverage compact 3D multi-chip module-based multiprocessors (MCM) technologies. Low energy CMOS will become increasingly important because of the thermodynamic considerations in cooling compact 3D MCM implementations and also from considerations of the power budget for space applications. In this paper, we show how the operating voltage is related to the threshold voltage of the CMOS transistors for accomplishing a task in VLSI with minimal energy. We also derive expressions for the noise margins at the optimal operating point. We then look at a low voltage CMOS (LVCMOS) technology developed at Stanford University which improves the power consumption over conventional CMOS by a couple of orders of magnitude and consider the suitability of the technology for space applications by characterizing its SEU immunity.

Tables for technical writers

Treesearch

E. vH. Larson

1947-01-01

Practically every publication we issue contains tables of some sort. Tables offer a convenient way of presenting many kinds of information. And tables are badly abused. There are few places a writer can go to find out how to construct clear, compact, easy-to-read tables, and how to use them.

Second derivative in the model of classical binary system

NASA Astrophysics Data System (ADS)

Abubekerov, M. K.; Gostev, N. Yu.

2016-06-01

We have obtained an analytical expression for the second derivatives of the light curve with respect to geometric parameters in the model of eclipsing classical binary systems. These expressions are essentially efficient algorithm to calculate the numerical values of these second derivatives for all physical values of geometric parameters. Knowledge of the values of second derivatives of the light curve at some point provides additional information about asymptotical behaviour of the function near this point and can significantly improve the search for the best-fitting light curve through the use of second-order optimization method. We write the expression for the second derivatives in a form which is most compact and uniform for all values of the geometric parameters and so make it easy to write a computer program to calculate the values of these derivatives.

Generalists and Specialists: A New View of How MHC Class I Molecules Fight Infectious Pathogens.

PubMed

Kaufman, Jim

2018-05-01

In comparison with the major histocompatibility complexes (MHCs) of typical mammals, the chicken MHC is simple and compact with a single dominantly expressed class I molecule that can determine the immune response. In addition to providing useful information for the poultry industry and allowing insights into the evolution of the adaptive immune system, the simplicity of the chicken MHC has allowed the discovery of phenomena that are more difficult to discern in the more complicated mammalian systems. This review discusses the new concept that poorly expressed promiscuous class I alleles act as generalists to protect against a wide variety of infectious pathogens, while highly expressed fastidious class I alleles can act as specialists to protect against new and dangerous pathogens. Copyright © 2018 The Author. Published by Elsevier Ltd.. All rights reserved.

AMTEC radioisotope power system for the Pluto Express mission

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ivanenok, J.F. III; Sievers, R.K.

1995-12-31

The Alkali Metal Thermal to Electric Converter (AMTEC) technology has made substantial advances in the last 3 years through design improvements and technical innovations. In 1993 programs began to produce an AMTEC cell specifically for the NASA Pluto Express Mission. A set of efficiency goals was established for this series of cells to be developed. According to this plan, cell {number_sign}8 would be 17% efficient but was actually 18% efficient. Achieving this goal, as well as design advances that allow the cell to be compact, has resulted in pushing the cell from an unexciting 2 W/kg and 2% efficiency tomore » very attractive 40 W/kg and 18% measured efficiency. This paper will describe the design and predict the performance of a radioisotope powered AMTEC system for the Pluto Express mission.« less

Purification and characterization of human pancreatic polypeptide expressed in E. coli.

PubMed

Griko, Y V; Kapanadze, M D

1995-08-04

The region of cDNA encoding human pancreatic polypeptide (hPP) was obtained by polymerase chain reaction (PCR) and subcloned into an expression vector. The pancreatic polypeptide gene was expressed in Escherichia coli in two versions: as a cleavable fusion protein with IgG-binding synthetic ZZ domains of protein A from Staphylococcus aureus or with the 1-48 fragment of lambda Cro repressor. Site-specific hydrolysis by hydroxylamine was used to cleave the fusion protein, releasing the human polypeptide. The structure of the obtained hPP has been studied by scanning microcalorimetry and circular dichroism spectrometry. It has been shown that hPP in solutions close to neutral has a compact and unique spatial structure with an extended hydrophobic core. This structure is stable at 20 degrees C and co-operatively breaks down upon heating from this temperature.

Active galactic nuclei cores in infrared-faint radio sources. Very long baseline interferometry observations using the Very Long Baseline Array

NASA Astrophysics Data System (ADS)

Herzog, A.; Middelberg, E.; Norris, R. P.; Spitler, L. R.; Deller, A. T.; Collier, J. D.; Parker, Q. A.

2015-06-01

Context. Infrared-faint radio sources (IFRS) form a new class of galaxies characterised by radio flux densities between tenths and tens of mJy and faint or absent infrared counterparts. It has been suggested that these objects are radio-loud active galactic nuclei (AGNs) at significant redshifts (z ≳ 2). Aims: Whereas the high redshifts of IFRS have been recently confirmed based on spectroscopic data, the evidence for the presence of AGNs in IFRS is mainly indirect. So far, only two AGNs have been unquestionably confirmed in IFRS based on very long baseline interferometry (VLBI) observations. In this work, we test the hypothesis that IFRS contain AGNs in a large sample of sources using VLBI. Methods: We observed 57 IFRS with the Very Long Baseline Array (VLBA) down to a detection sensitivity in the sub-mJy regime and detected compact cores in 35 sources. Results: Our VLBA detections increase the number of VLBI-detected IFRS from 2 to 37 and provide strong evidence that most - if not all - IFRS contain AGNs. We find that IFRS have a marginally higher VLBI detection fraction than randomly selected sources with mJy flux densities at arcsec-scales. Moreover, our data provide a positive correlation between compactness - defined as the ratio of milliarcsec- to arcsec-scale flux density - and redshift for IFRS, but suggest a decreasing mean compactness with increasing arcsec-scale radio flux density. Based on these findings, we suggest that IFRS tend to contain young AGNs whose jets have not formed yet or have not expanded, equivalent to very compact objects. We found two IFRS that are resolved into two components. The two components are spatially separated by a few hundred milliarcseconds in both cases. They might be components of one AGN, a binary black hole, or the result of gravitational lensing.

The Connection Between X-ray Binaries and Star Clusters in the Antennae

NASA Astrophysics Data System (ADS)

Rangelov, Blagoy; Chandar, R.; Prestwich, A.

2011-05-01

High Mass X-ray Binaries (HMXBs) are believed to form in massive, compact star clusters. However the correlation between these young binary star systems and properties of their parent clusters are still poorly known. We compare the locations of 82 X-ray binaries detected in the merging Antennae galaxies by Zezas et al. (2006) based on observations taken with the Chandra Space Telescope, with a catalog of optically selected star clusters presented recently by Whitmore et al. (2010) based on observations taken with the Hubble Space Telescope. We find 22 X-ray binaries coincident or nearly coincident with star clusters. The ages of the clusters were estimated by comparing their UBVIHα colors with predictions from stellar evolutionary models. We find that 14 of the 22 coincident sources (64%) are hosted by star clusters with ages of 6 Myr or less. At these very young ages, only stars initially more massive than M ≥ 30 Msun have evolved into compact remnants, almost certainly black holes. Therefore, these 14 sources are likely to be black hole binaries. Five of the XRBs are hosted by young clusters with ages τ 30-50 Myr, while three are hosted by intermediate age clusters with τ 100-300 Myr. We suggest that these older X-ray binaries likely have neutron stars as the compact object. We conclude that precision age-dating of star clusters, which are spatially coincident with XRBs in nearby star forming galaxies, is a powerful method of constraining the nature of the XRBs.

Equivariant Gromov-Witten Invariants of Algebraic GKM Manifolds

NASA Astrophysics Data System (ADS)

Liu, Chiu-Chu Melissa; Sheshmani, Artan

2017-07-01

An algebraic GKM manifold is a non-singular algebraic variety equipped with an algebraic action of an algebraic torus, with only finitely many torus fixed points and finitely many 1-dimensional orbits. In this expository article, we use virtual localization to express equivariant Gromov-Witten invariants of any algebraic GKM manifold (which is not necessarily compact) in terms of Hodge integrals over moduli stacks of stable curves and the GKM graph of the GKM manifold.

Effect of roll-compaction and milling conditions on granules and tablet properties.

PubMed

Perez-Gandarillas, Lucia; Perez-Gago, Ana; Mazor, Alon; Kleinebudde, Peter; Lecoq, Olivier; Michrafy, Abderrahim

2016-09-01

Dry granulation is an agglomeration process used to produce size-enlarged particles (granules), improving the handling properties of powders such as flowability. In this process, powders are compacted using a roll press to produce ribbons, which are milled in granules used further in the tableting process. The granule and tablet properties are influenced by the existence of different designs of the roll compactors, milling systems and the interaction between process parameters and raw material properties. The main objective of this work was to investigate how different roll-compaction conditions and milling process parameters impact on ribbons, granules and tablet properties, highlighting the role of the sealing system (cheek plates and rimmed roll). In this context, two common excipients differing in their mechanical behaviour (MCC and mannitol) are used. The study is based on the analysis of granule size distribution together with the characterization of loss of compactability during die compaction. Results show that the tensile strength of tablets is lower when using granules than when the raw materials are compressed. Moreover, the plastic material (MCC) is more sensitive than the brittle one (mannitol). Regarding the roll-force, it is observed that the higher the roll force, the lower the tensile strength of tablets from granulated material is. These findings are in agreement with the literature. The comparison of sealing systems shows that the rimmed-roll system leads to slightly stronger tablets than the use of cheek plates. In addition, the use of the rimmed-roll system reduces the amount of fines, in particular when high roll force is applied. Overall, it can be concluded that roll-compaction effect is predominant over the milling effect on the production of fines but less significant on the tablet properties. This study points out that the balance between a good flowability by reducing the amount of fines and appropriate tablet strength is achieved with rimmed-roll and the highest roll-force used. Copyright © 2016 Elsevier B.V. All rights reserved.

Refining the boundaries of the classical de Sitter landscape

NASA Astrophysics Data System (ADS)

Andriot, David; Blåbäck, Johan

2017-03-01

We derive highly constraining no-go theorems for classical de Sitter backgrounds of string theory, with parallel sources; this should impact the embedding of cosmological models. We study ten-dimensional vacua of type II supergravities with parallel and backreacted orientifold O p -planes and D p -branes, on four-dimensional de Sitter spacetime times a compact manifold. Vacua for p = 3, 7 or 8 are completely excluded, and we obtain tight constraints for p = 4, 5, 6. This is achieved through the derivation of an enlightening expression for the four-dimensional Ricci scalar. Further interesting expressions and no-go theorems are obtained. The paper is self-contained so technical aspects, including conventions, might be of more general interest.

Path to Market for Compact Modular Fusion Power Cores

NASA Astrophysics Data System (ADS)

Woodruff, Simon; Baerny, Jennifer K.; Mattor, Nathan; Stoulil, Don; Miller, Ronald; Marston, Theodore

2012-08-01

The benefits of an energy source whose reactants are plentiful and whose products are benign is hard to measure, but at no time in history has this energy source been more needed. Nuclear fusion continues to promise to be this energy source. However, the path to market for fusion systems is still regularly a matter for long-term (20 + year) plans. This white paper is intended to stimulate discussion of faster commercialization paths, distilling guidance from investors, utilities, and the wider energy research community (including from ARPA-E). There is great interest in a small modular fusion system that can be developed quickly and inexpensively. A simple model shows how compact modular fusion can produce a low cost development path by optimizing traditional systems that burn deuterium and tritium, operating not only at high magnetic field strength, but also by omitting some components that allow for the core to become more compact and easier to maintain. The dominant hurdles to the development of low cost, practical fusion systems are discussed, primarily in terms of the constraints placed on the cost of development stages in the private sector. The main finding presented here is that the bridge from DOE Office of Science to the energy market can come at the Proof of Principle development stage, providing the concept is sufficiently compact and inexpensive that its development allows for a normal technology commercialization path.

Compact Video Microscope Imaging System Implemented in Colloid Studies

NASA Technical Reports Server (NTRS)

McDowell, Mark

2002-01-01

Long description Photographs showing fiber-optic light source, microscope and charge-coupled discharge (CCD) camera head connected to camera body, CCD camera body feeding data to image acquisition board in PC, and Cartesian robot controlled via PC board. The Compact Microscope Imaging System (CMIS) is a diagnostic tool with intelligent controls for use in space, industrial, medical, and security applications. CMIS can be used in situ with a minimum amount of user intervention. This system can scan, find areas of interest in, focus on, and acquire images automatically. Many multiple-cell experiments require microscopy for in situ observations; this is feasible only with compact microscope systems. CMIS is a miniature machine vision system that combines intelligent image processing with remote control. The software also has a user-friendly interface, which can be used independently of the hardware for further post-experiment analysis. CMIS has been successfully developed in the SML Laboratory at the NASA Glenn Research Center and adapted for use for colloid studies and is available for telescience experiments. The main innovations this year are an improved interface, optimized algorithms, and the ability to control conventional full-sized microscopes in addition to compact microscopes. The CMIS software-hardware interface is being integrated into our SML Analysis package, which will be a robust general-purpose image-processing package that can handle over 100 space and industrial applications.

DENSITY AND ECCENTRICITY OF KEPLER PLANETS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu Yanqin; Lithwick, Yoram

2013-07-20

We analyze the transit timing variations (TTV) obtained by the Kepler mission for 22 sub-Jovian planet pairs (19 published, 3 new) that lie close to mean motion resonances. We find that the TTV phases for most of these pairs lie close to zero, consistent with an eccentricity distribution that has a very low root-mean-squared value of e {approx} 0.01; but about a quarter of the pairs possess much higher eccentricities, up to e {approx} 0.1-0.4. For the low-eccentricity pairs, we are able to statistically remove the effect of eccentricity to obtain planet masses from TTV data. These masses, together withmore » those measured by radial velocity, yield a best-fit mass-radius relation M {approx} 3 M{sub Circled-Plus }(R/R{sub Circled-Plus }). This corresponds to a constant surface escape velocity of {approx}20 km s{sup -1}. We separate the planets into two distinct groups: ''mid-sized'' (those greater than 3 R{sub Circled-Plus }) and 'compact' (those smaller). All mid-sized planets are found to be less dense than water and therefore must contain extensive H/He envelopes that are comparable in mass to that of their cores. We argue that these planets have been significantly sculpted by photoevaporation. Surprisingly, mid-sized planets, a minority among Kepler candidates, are discovered exclusively around stars more massive than 0.8 M{sub Sun }. The compact planets, on the other hand, are often denser than water. Combining our density measurements with those from radial velocity studies, we find that hotter compact planets tend to be denser, with the hottest ones reaching rock density. Moreover, hotter planets tend to be smaller in size. These results can be explained if the compact planets are made of rocky cores overlaid with a small amount of hydrogen, {<=}1% in mass, with water contributing little to their masses or sizes. Photoevaporation has exposed bare rocky cores in cases of the hottest planets. Our conclusion that these planets are likely not water worlds contrasts with some previous studies. While mid-sized planets most likely accreted their hydrogen envelope from the proto-planetary disks, compact planets could have obtained theirs via either accretion or outgassing. The presence of the two distinct classes suggests that 3 R{sub Circled-Plus} could be identified as the dividing line between 'hot Neptunes' and 'super-Earths'.« less

T-helper cell receptors from long-term survivors after telomerase cancer vaccination for use in adoptive cell therapy.

PubMed

Kyte, Jon Amund; Gaudernack, Gustav; Faane, Anne; Lislerud, Kari; Inderberg, Else Marit; Brunsvig, Paal; Aamdal, Steinar; Kvalheim, Gunnar; Wälchli, Sébastien; Pule, Martin

2016-01-01

We herein report retargeting of T-helper (Th) cells against the universal cancer antigen telomerase for use in adoptive cell therapy. The redirected Th cells may counter tumor tolerance, transform the inflammatory milieu, and induce epitope spreading and cancer senescence. We have previously conducted a series of trials evaluating vaccination with telomerase peptides. From long-term survivors, we isolated >100 CD4 + Th-cell clones recognizing telomerase epitopes. The clones were characterized with regard to HLA restriction, functional avidity, fine specificity, proliferative capacity, cytokine profile, and recognition of naturally processed epitopes. DP4 is the most prevalent HLA molecule worldwide. Two DP4-restricted T-cell clones with different functional avidity, C13 and D71, were selected for molecular T-cell receptor (TCR) cloning. Both clones showed a high proliferative capacity, recognition of naturally processed telomerase epitopes, and a polyfunctional and Th1-weighted cytokine profile. TCR C13 and D71 were cloned into the retroviral vector MP71 together with the compact and GMP-applicable marker/suicide gene RQR8. Both TCRs were expressed well in recipient T cells after PBMC transduction. The transduced T cells co-expressed RQR8 and acquired the desired telomerase specificity, with a polyfunctional response including production of TNFa, IFNγ, and CD107a. Interestingly, the DP4-restricted TCRs were expressed and functional both in CD4 + and CD8 + T cells. The findings demonstrate that the cloned TCRs confer recipient T cells with the desired hTERT-specificity and functionality. We hypothesize that adoptive therapy with Th cells may offer a powerful novel approach for overcoming tumor tolerance and synergize with other forms of immunotherapy.

L-MPZ, a Novel Isoform of Myelin P0, Is Produced by Stop Codon Readthrough*

PubMed Central

Yamaguchi, Yoshihide; Hayashi, Akiko; Campagnoni, Celia W.; Kimura, Akio; Inuzuka, Takashi; Baba, Hiroko

2012-01-01

Myelin protein zero (P0 or MPZ) is a major myelin protein (∼30 kDa) expressed in the peripheral nervous system (PNS) in terrestrial vertebrates. Several groups have detected a P0-related 36-kDa (or 35-kDa) protein that is expressed in the PNS as an antigen for the serum IgG of patients with neuropathy. The molecular structure and function of this 36-kDa protein are, however, still unknown. We hypothesized that the 36-kDa protein may be derived from P0 mRNA by stop codon readthrough. We found a highly conserved region after the regular stop codon in predicted sequences from the 3′-UTR of P0 in higher animals. MS of the 36-kDa protein revealed that both P0 peptides and peptides deduced from the P0 3′-UTR sequence were found among the tryptic fragments. In transfected cells and in an in vitro transcription/translation system, the 36-kDa molecule was also produced from the identical mRNA that produced P0. We designated this 36-kDa molecule as large myelin protein zero (L-MPZ), a novel isoform of P0 that contains an additional domain at the C terminus. In the PNS, L-MPZ was localized in compact myelin. In transfected cells, just like P0, L-MPZ was localized at cell-cell adhesion sites in the plasma membrane. These results suggest that L-MPZ produced by the stop codon readthrough mechanism is potentially involved in myelination. Since this is the first finding of stop codon readthrough in a common mammalian protein, detailed analysis of L-MPZ expression will help to understand the mechanism of stop codon readthrough in mammals. PMID:22457349

Increased phospho-AKT is associated with loss of the androgen receptor during the progression of N-methyl-N-nitrosourea-induced prostate carcinogenesis in rats.

PubMed

Liao, Zhiming; Wang, Shihua; Boileau, Thomas W-M; Erdman, John W; Clinton, Steven K

2005-07-01

Characterization of molecular events during N-methyl-N-nitrosourea (MNU)-induced rat prostate carcinogenesis enhances the utility of this model for the preclinical assessment of preventive strategies. Androgen independence is typical of advanced human prostate cancer and may occur through multiple mechanisms including the loss of androgen receptor (AR) expression and the activation of alternative signaling pathways. We examined the interrelationships between AR and p-AKT expression by immunohistochemical staining during MNU-androgen-induced prostate carcinogenesis in male Wistar-Unilever rats. Histone nuclear staining and image analysis was employed to assess parallel changes in chromatin and nuclear structure. The percentage of AR positive nuclei decreased (P < 0.01) as carcinogenesis progressed: hyperplasia (92%), atypical hyperplasia (92%), well-differentiated adenocarcinoma (57%), moderately-differentiated adenocarcinoma (19%), and poorly-differentiated adenocarcinoma (10%). Conversely, p-AKT staining increased significantly during carcinogenesis. Sparse staining was observed in normal tissues (0.2% of epithelial area) and hyperplastic lesions (0.1%), while expression increased significantly (P < 0.001) in atypical hyperplasia (7.6%), well-differentiated adenocarcinoma (16.7%), moderately-differentiated adenocarcinoma (19.6%), and poorly-differentiated adenocarcinoma (17.4%). In parallel, nuclear morphometry revealed increased nuclear size, greater irregularity, and lower DNA compactness as cancers became more poorly differentiated. In the MNU model, the progressive evolution of dominant tumor cell populations showing an increase in p-AKT in parallel with a decline in AR staining suggests that activation of AKT signaling may be one of several mechanisms contributing to androgen insensitivity during prostate cancer progression. Our observations mimic findings suggested by human studies and support the relevance of the MNU model in preclinical studies of preventive strategies. (c) 2005 Wiley-Liss, Inc.

Crucial role of dynamic linker histone binding and divalent ions for DNA accessibility and gene regulation revealed by mesoscale modeling of oligonucleosomes

PubMed Central

Collepardo-Guevara, Rosana; Schlick, Tamar

2012-01-01

Monte Carlo simulations of a mesoscale model of oligonucleosomes are analyzed to examine the role of dynamic-linker histone (LH) binding/unbinding in high monovalent salt with divalent ions, and to further interpret noted chromatin fiber softening by dynamic LH in monovalent salt conditions. We find that divalent ions produce a fiber stiffening effect that competes with, but does not overshadow, the dramatic softening triggered by dynamic-LH behavior. Indeed, we find that in typical in vivo conditions, dynamic-LH binding/unbinding reduces fiber stiffening dramatically (by a factor of almost 5, as measured by the elasticity modulus) compared with rigidly fixed LH, and also the force needed to initiate chromatin unfolding, making it consistent with those of molecular motors. Our data also show that, during unfolding, divalent ions together with LHs induce linker-DNA bending and DNA–DNA repulsion screening, which guarantee formation of heteromorphic superbeads-on-a-string structures that combine regions of loose and compact fiber independently of the characteristics of the LH–core bond. These structures might be important for gene regulation as they expose regions of the DNA selectively. Dynamic control of LH binding/unbinding, either globally or locally, in the presence of divalent ions, might constitute a mechanism for regulation of gene expression. PMID:22790986

Bond characteristics of steel fiber and deformed reinforcing steel bar embedded in steel fiber reinforced self-compacting concrete (SFRSCC)

NASA Astrophysics Data System (ADS)

Aslani, Farhad; Nejadi, Shami

2012-09-01

Steel fiber reinforced self-compacting concrete (SFRSCC) is a relatively new composite material which congregates the benefits of the self-compacting concrete (SCC) technology with the profits derived from the fiber addition to a brittle cementitious matrix. Steel fibers improve many of the properties of SCC elements including tensile strength, ductility, toughness, energy absorption capacity, fracture toughness and cracking. Although the available research regarding the influence of steel fibers on the properties of SFRSCC is limited, this paper investigates the bond characteristics between steel fiber and SCC firstly. Based on the available experimental results, the current analytical steel fiber pullout model (Dubey 1999) is modified by considering the different SCC properties and different fiber types (smooth, hooked) and inclination. In order to take into account the effect of fiber inclination in the pullout model, apparent shear strengths ( τ ( app)) and slip coefficient ( β) are incorporated to express the variation of pullout peak load and the augmentation of peak slip as the inclined angle increases. These variables are expressed as functions of the inclined angle ( ϕ). Furthurmore, steel-concrete composite floors, reinforced concrete floors supported by columns or walls and floors on an elastic foundations belong to the category of structural elements in which the conventional steel reinforcement can be partially replaced by the use of steel fibers. When discussing deformation capacity of structural elements or civil engineering structures manufactured using SFRSCC, one must be able to describe thoroughly both the behavior of the concrete matrix reinforced with steel fibers and the interaction between this composite matrix and discrete steel reinforcement of the conventional type. However, even though the knowledge on bond behavior is essential for evaluating the overall behavior of structural components containing reinforcement and steel fibers, information is hardly available in this area. In this study, bond characteristics of deformed reinforcing steel bars embedded in SFRSCC is investigated secondly.

Sifting Through SDO's AIA Cosmic Ray Hits to Find Treasure

NASA Astrophysics Data System (ADS)

Kirk, M. S.; Thompson, B. J.; Viall, N. M.; Young, P. R.

2017-12-01

The Solar Dynamics Observatory's Atmospheric Imaging Assembly (SDO AIA) has revolutionized solar imaging with its high temporal and spatial resolution, unprecedented spatial and temporal coverage, and seven EUV channels. Automated algorithms routinely clean these images to remove cosmic ray intensity spikes as a part of its preprocessing algorithm. We take a novel approach to survey the entire set of AIA "spike" data to identify and group compact brightenings across the entire SDO mission. The AIA team applies a de-spiking algorithm to remove magnetospheric particle impacts on the CCD cameras, but it has been found that compact, intense solar brightenings are often removed as well. We use the spike database to mine the data and form statistics on compact solar brightenings without having to process large volumes of full-disk AIA data. There are approximately 3 trillion "spiked pixels" removed from images over the mission to date. We estimate that 0.001% of those are of solar origin and removed by mistake, giving us a pre-segmented dataset of 30 million events. We explore the implications of these statistics and the physical qualities of the "spikes" of solar origin.

Irradiation-driven Mass Transfer Cycles in Compact Binaries

NASA Astrophysics Data System (ADS)

Büning, A.; Ritter, H.

2005-08-01

We elaborate on the analytical model of Ritter, Zhang, & Kolb (2000) which describes the basic physics of irradiation-driven mass transfer cycles in semi-detached compact binary systems. In particular, we take into account a contribution to the thermal relaxation of the donor star which is unrelated to irradiation and which was neglected in previous studies. We present results of simulations of the evolution of compact binaries undergoing mass transfer cycles, in particular also of systems with a nuclear evolved donor star. These computations have been carried out with a stellar evolution code which computes mass transfer implicitly and models irradiation of the donor star in a point source approximation, thereby allowing for much more realistic simulations than were hitherto possible. We find that low-mass X-ray binaries (LMXBs) and cataclysmic variables (CVs) with orbital periods ⪉ 6hr can undergo mass transfer cycles only for low angular momentum loss rates. CVs containing a giant donor or one near the terminal age main sequence are more stable than previously thought, but can possibly also undergo mass transfer cycles.

Spectrometers for compact neutron sources

NASA Astrophysics Data System (ADS)

Voigt, J.; Böhm, S.; Dabruck, J. P.; Rücker, U.; Gutberlet, T.; Brückel, T.

2018-03-01

We discuss the potential for neutron spectrometers at novel accelerator driven compact neutron sources. Such a High Brilliance Source (HBS) relies on low energy nuclear reactions, which enable cryogenic moderators in very close proximity to the target and neutron optics at comparably short distances from the moderator compared to existing sources. While the first effect aims at increasing the phase space density of a moderator, the second allows the extraction of a large phase space volume, which is typically requested for spectrometer applications. We find that competitive spectrometers can be realized if (a) the neutron production rate can be synchronized with the experiment repetition rate and (b) the emission characteristics of the moderator can be matched to the phase space requirements of the experiment. MCNP simulations for protons or deuterons on a Beryllium target with a suitable target/moderator design yield a source brightness, from which we calculate the sample fluxes by phase space considerations for different types of spectrometers. These match closely the figures of todays spectrometers at medium flux sources. Hence we conclude that compact neutron sources might be a viable option for next generation neutron sources.

Explosively generated shock wave processing of metal powders by instrumented detonics

NASA Astrophysics Data System (ADS)

Sharma, A. D.; Sharma, A. K.; Thakur, N.

2013-06-01

The highest pressures generated by dynamic processes resulting either from high velocity impact or by spontaneous release of high energy rate substances in direct contact with a metal find superior applications over normal mechanical means. The special feature of explosive loading to the powder materials over traditional methods is its controlled detonation pressure which directly transmits shock energy to the materials which remain entrapped inside powder resulting into several micro-structural changes and hence improved mechanical properties. superalloy powders have been compacted nearer to the theoretical density by shock wave consolidation. In a single experimental set-up, compaction of metal powder and measurement of detonation velocity have been achieved successfully by using instrumented detonics. The thrust on the work is to obtain uniform, crack-free and fracture-less compacts of superalloys having intact crystalline structure as has been examined from FE-SEM, XRD and mechanical studies. Shock wave processing is an emerging technique and receiving much attention of the materials scientists and engineers owing to its excellent advantages over traditional metallurgical methods due to short processing time, scaleup advantage and controlled detonation pressure.

ESO 306-17

NASA Image and Video Library

2017-12-08

View a video clip zoom in on galaxy ESO 306-17 here: www.flickr.com/photos/gsfc/4409589832/ This image from the Advanced Camera for Surveys aboard the NASA/ESA Hubble Space Telescope highlights the large and bright elliptical galaxy called ESO 306-17 in the southern sky. In this image, it appears that ESO 306-17 is surrounded by other galaxies but the bright galaxies at bottom left are thought to be in the foreground, not at the same distance in the sky. In reality, ESO 306-17 lies fairly abandoned in an enormous sea of dark matter and hot gas. Researchers are also using this image to search for nearby ultra-compact dwarf galaxies. Ultra-compact dwarfs are mini versions of dwarf galaxies that have been left with only their core due to interaction with larger, more powerful galaxies. Most ultra-compact dwarfs discovered to date are located near giant elliptical galaxies in large clusters of galaxies, so it will be interesting to see if researchers find similar objects in fossil groups. Credit: NASA, ESA and Michael West (ESO)

Induction and quantification of collagen fiber alignment in a three-dimensional hydroxyapatite-collagen composite scaffold.

PubMed

Banglmaier, Richard F; Sander, Edward A; VandeVord, Pamela J

2015-04-01

Hydroxyapatite-collagen composite scaffolds are designed to serve as a regenerative load bearing replacement that mimics bone. However, the material properties of these scaffolds are at least an order of magnitude less than that of bone and subject to fail under physiological loading conditions. These scaffolds compositionally resemble bone but they do not possess important structural attributes such as an ordered arrangement of collagen fibers, which is a correlate to the mechanical properties in bone. Furthermore, it is unclear how much ordering of structure is satisfactory to mimic bone. Therefore, quantitative methods are needed to characterize collagen fiber alignment in these scaffolds for better correlation between the scaffold structure and the mechanical properties. A combination of extrusion and compaction was used to induce collagen fiber alignment in composite scaffolds. Collagen fiber alignment, due to extrusion and compaction, was quantified from polarized light microscopy images with a Fourier transform image processing algorithm. The Fourier transform method was capable of resolving the degree of collagen alignment from polarized light images. Anisotropy indices of the image planes ranged from 0.08 to 0.45. Increases in the degree of fiber alignment induced solely by extrusion (0.08-0.25) or compaction (0.25-0.44) were not as great as those by the combination of extrusion and compaction (0.35-0.45). Additional measures of randomness and fiber direction corroborate these anisotropy findings. This increased degree of collagen fiber alignment was induced in a preferred direction that is consistent with the extrusion direction and parallel with the compacted plane. Copyright © 2015 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.

VLA neutral hydrogen imaging of compact groups

NASA Technical Reports Server (NTRS)

Williams, B. A.; Mcmahon, P. M.; Vangorkom, J. H.

1990-01-01

Images of the neutral hydrogen (H I) in the direction of the compact groups of galaxies, HCG 31, HCG 44, and HCG 79 are presented. The authors find in HCG 31 and HCG 79, emission contained within a cloud much larger than the galaxies as well as the entire group. The H I emission associated with HCG 44 is located within the individual galaxies but shows definite signs of tidal interactions. The authors imaged the distribution and kinematics of neutral hydrogen at the two extremes of group sizes represented in Hickson's sample. HCG 44 is at the upper limit while HCG 18, HCG 31, and HCG 79 are at the lower end. Although the number of groups that have been imaged is still very small, there may be a pattern emerging which describes the H I morphology of compact groups. The true nature of compact groups has been the subject of considerable debate and controversy. The most recent observational and theoretical evidence strongly suggests that compact groups are physically dense, dynamical systems that are in the process of merging into a single object (Williams and Rood 1987, Hickson and Rood 1988, Barnes 1989). The neutral hydrogen deficiency observed by Williams and Rood (1987) is consistent with a model in which frequent galactic collisions and interactions have heated some of the gas during the short lifetime of the group. The H I disks which are normally more extended than the luminous ones are expected to be more sensitive to collisions and to trace the galaxy's response to recent interactions. Very Large Array observations can provide in most cases the spatial resolution needed to confirm the dynamical interactions in these systems.

Advances in compact manufacturing for shape and performance controllability of large-scale components-a review

NASA Astrophysics Data System (ADS)

Qin, Fangcheng; Li, Yongtang; Qi, Huiping; Ju, Li

2017-01-01

Research on compact manufacturing technology for shape and performance controllability of metallic components can realize the simplification and high-reliability of manufacturing process on the premise of satisfying the requirement of macro/micro-structure. It is not only the key paths in improving performance, saving material and energy, and green manufacturing of components used in major equipments, but also the challenging subjects in frontiers of advanced plastic forming. To provide a novel horizon for the manufacturing in the critical components is significant. Focused on the high-performance large-scale components such as bearing rings, flanges, railway wheels, thick-walled pipes, etc, the conventional processes and their developing situations are summarized. The existing problems including multi-pass heating, wasting material and energy, high cost and high-emission are discussed, and the present study unable to meet the manufacturing in high-quality components is also pointed out. Thus, the new techniques related to casting-rolling compound precise forming of rings, compact manufacturing for duplex-metal composite rings, compact manufacturing for railway wheels, and casting-extruding continuous forming of thick-walled pipes are introduced in detail, respectively. The corresponding research contents, such as casting ring blank, hot ring rolling, near solid-state pressure forming, hot extruding, are elaborated. Some findings in through-thickness microstructure evolution and mechanical properties are also presented. The components produced by the new techniques are mainly characterized by fine and homogeneous grains. Moreover, the possible directions for further development of those techniques are suggested. Finally, the key scientific problems are first proposed. All of these results and conclusions have reference value and guiding significance for the integrated control of shape and performance in advanced compact manufacturing.

Molecular interactions and residues involved in force generation in the T4 viral DNA packaging motor.

PubMed

Migliori, Amy D; Smith, Douglas E; Arya, Gaurav

2014-12-12

Many viruses utilize molecular motors to package their genomes into preformed capsids. A striking feature of these motors is their ability to generate large forces to drive DNA translocation against entropic, electrostatic, and bending forces resisting DNA confinement. A model based on recently resolved structures of the bacteriophage T4 motor protein gp17 suggests that this motor generates large forces by undergoing a conformational change from an extended to a compact state. This transition is proposed to be driven by electrostatic interactions between complementarily charged residues across the interface between the N- and C-terminal domains of gp17. Here we use atomistic molecular dynamics simulations to investigate in detail the molecular interactions and residues involved in such a compaction transition of gp17. We find that although electrostatic interactions between charged residues contribute significantly to the overall free energy change of compaction, interactions mediated by the uncharged residues are equally if not more important. We identify five charged residues and six uncharged residues at the interface that play a dominant role in the compaction transition and also reveal salt bridging, van der Waals, and solvent hydrogen-bonding interactions mediated by these residues in stabilizing the compact form of gp17. The formation of a salt bridge between Glu309 and Arg494 is found to be particularly crucial, consistent with experiments showing complete abrogation in packaging upon Glu309Lys mutation. The computed contributions of several other residues are also found to correlate well with single-molecule measurements of impairments in DNA translocation activity caused by site-directed mutations. Copyright © 2014 Elsevier Ltd. All rights reserved.

Tidal deformability and I-Love-Q relations for gravastars with polytropic thin shells

NASA Astrophysics Data System (ADS)

Uchikata, Nami; Yoshida, Shijun; Pani, Paolo

2016-09-01

The moment of inertia, the spin-induced quadrupole moment, and the tidal Love number of neutron-star and quark-star models are related through some relations which depend only mildly on the stellar equation of state. These "I-Love-Q" relations have important implications for astrophysics and gravitational-wave astronomy. An interesting problem is whether similar relations hold for other compact objects and how they approach the black hole limit. To answer these questions, here we investigate the deformation properties of a large class of thin-shell gravastars, which are exotic compact objects that do not possess an event horizon nor a spacetime singularity. Working in a small-spin and small-tidal field expansion, we calculate the moment of inertia, the quadrupole moment, and the (quadrupolar electric) tidal Love number of gravastars with a polytropic thin shell. The I-Love-Q relations of a thin-shell gravastar are drastically different from those of an ordinary neutron star. The Love number and quadrupole moment for less compact models have the opposite sign relative to those of ordinary neutron stars, and the I-Love-Q relations continuously approach the black hole limit. We consider a variety of polytropic equations of state for the matter shell and find no universality in the I-Love-Q relations. However, we cannot deny the possibility that, similarly to the neutron-star case, an approximate universality might emerge for a limited class of equations of state. Finally, we discuss how a measurement of the tidal deformability from the gravitational-wave detection of a compact-binary inspiral can be used to constrain exotic compact objects like gravastars.

Investigation of HMA compactability using GPR technique

NASA Astrophysics Data System (ADS)

Plati, Christina; Georgiou, Panos; Loizos, Andreas

2014-05-01

In-situ field density is often regarded as one of the most important controls used to ensure that an asphalt pavement being placed is of high quality. The achieved density results from the effectiveness of the applied compaction mode on the Hot Mix Asphalt (HMA) layer. It is worthwhile mentioning that the proper compaction of HMA increases pavement fatigue life, decreases the amount of permanent deformation or rutting, reduces the amount of oxidation or aging, decreases moisture damage or stripping, increases strength and internal stability, and may decrease slightly the amount of low-temperature cracking that may occur in the mix. Conventionally, the HMA density in the field is assessed by direct destructive methods, including through the cutting of samples or drilling cores. These methods are characterized by a high accuracy, although they are intrusive and time consuming. In addition, they provide local information, i.e. information only for the exact test location. To overcome these limitations, the use of non-intrusive techniques is often recommended. The Ground Penetrating Radar (GPR) technique is an example of a non-intrusive technique that has been increasingly used for pavement investigations over the years. GPR technology is practical and application-oriented with the overall design concept, as well as the hardware, usually dependent on the target type and the material composing the target and its surroundings. As the sophistication of operating practices increases, the technology matures and GPR becomes an intelligent sensor system. The intelligent sensing deals with the expanded range of GPR applications in pavements such as determining layer thickness, detecting subsurface distresses, estimating moisture content, detecting voids and others. In addition, the practice of using GPR to predict in-situ field density of compacted asphalt mixture material is still under development and research; however the related research findings seem to be promising. Actually, the prediction is not regulated by any standards or specifications, although the practice is considered to be workable. In view of the above, an extensive experiment was carried out in both the laboratory and the field based on a trial asphalt pavement section under construction. In the laboratory, the study focused on the estimation of the density of HMA specimens achieved through three different roller compaction modes (static, vibratory and a combination of both) targeted to simulate field compaction and assess the asphalt mix compactability. In the field, the different compaction modes were successively implemented on three subsections of the trial pavement section. Along each subsection, GPR data was collected in order to determine the new material's dielectric properties and based on that, to predict its density using proper algorithm. Thus, cores were extracted to be used as ground truth data. The comparison of the new asphalt material compactability as obtained from the laboratory specimens, the predictions based on GPR data and the field cores provided useful information that facilitated the selection of the most effective compaction mode yielding the proper compaction degree in the field. This work benefited from networking activities carried out within the EU funded COST Action TU1208 "Civil Engineering Applications of Ground Penetrating Radar."

Increased compactibility of acetames after roll compaction.

PubMed

Kuntz, Theresia; Schubert, Martin A; Kleinebudde, Peter

2011-01-01

A common technique for manufacturing granules in a continuous way is the combination of roll compaction and subsequent milling. Roll compaction can considerably impact tableting performance of a material. The purpose of this study was to investigate the influence of roll compaction/dry granulation on the compaction behavior of acetames, a class of active pharmaceutical substances, which are mainly used for the treatment of central nervous diseases. Some representatives of acetames were roll compacted and then compressed into tablets. Compactibility of granules was compared with the compaction behavior of the directly compressed drug powders. In contrast to many other materials, the roll compaction step induced an increase in compactibility for all investigated acetames. Specific surface areas of the untreated and the roll compacted drugs were determined by nitrogen adsorption. The raise in compactibility observed was accompanied by an increase in specific surface area during roll compaction. Copyright © 2010 Elsevier B.V. All rights reserved.

Bone-derived mesenchymal stromal cells from HIV transgenic mice exhibit altered proliferation, differentiation capacity and paracrine functions along with impaired therapeutic potential in kidney injury

PubMed Central

Cheng, Kang; Rai, Partab; Lan, Xiqian; Plagov, Andrei; Malhotra, Ashwani; Gupta, Sanjeev; Singhal, Pravin C

2013-01-01

Mesenchymal stem cells (MSCs) secrete paracrine factors that could be cytoprotective and serve roles in immunoregulation during tissue injury. Although MSCs express HIV receptors, and co-receptors, and are susceptible to HIV infection, whether HIV-1 may affect biological properties of MSCs needs more study. We evaluated cellular proliferation, differentiation and paracrine functions of MSCs isolated from compact bones of healthy control mice and Tg26 HIV-1 transgenic mice. The ability of MSCs to protect against cisplatin toxicity was studied in cultured renal tubular cells as well as in intact mice. We successfully isolated MSCs from healthy mice and Tg26 HIV-1 transgenic mice and found the latter expressed viral Nef, Vpu, NL4-3 and Vif genes. The proliferation and differentiation of Tg26 HIV-1 MSCs was inferior to MSCs from healthy mice. Moreover, transplantation of Tg26 HIV-1 MSCs less effectively improved outcomes compared with healthy MSCs in mice with acute kidney injury. Also, Tg26 HIV-1 MSCs secreted multiple cytokines, but at significantly lower levels than healthy MSCs, which resulted in failure of conditioned medium from these MSCs to protect cultured renal tubular cells from cisplatin toxicity. Therefore, HIV-1 had adverse biological effects on MSCs extending to their proliferation, differentiation, function, and therapeutic potential. These findings will help in advancing mechanistical insight in renal injury and repair in the setting of HIV-1 infection. PMID:23806280

Ethanol-induced disruption of Golgi apparatus morphology, primary neurite number and cellular orientation in developing cortical neurons

PubMed Central

Powrozek, Teresa A.; Olson, Eric C.

2012-01-01

Prenatal ethanol exposure disrupts cortical neurite initiation and outgrowth, but prior studies have reported both ethanol-dependent growth promotion and inhibition. To resolve this ambiguity and better approximate in vivo conditions, we quantitatively analyzed neuronal morphology using a new, whole hemisphere explant model. In this model, Layer 6 (L6) cortical neurons migrate, laminate and extend neurites in an organotypic fashion. To selectively label L6 neurons we performed ex utero electroporation of a GFP expression construct at embryonic day 13 and allowed the explants to develop for 2 days in vitro. Explants were exposed to (400mg/dL) ethanol for either 4 or 24 hrs prior to fixation. Complete 3-D reconstructions were made of >80 GFP-positive neurons in each experimental condition. Acute responses to ethanol exposure included compaction of the Golgi apparatus accompanied by elaboration of supernumerary primary apical neurites, as well as a modest (~15%) increase in higher order apical neurite length. With longer exposure time, ethanol exposure leads to a consistent, significant disorientation of the cell (cell body, primary apical neurite, and Golgi) with respect to the pial surface. The effects on cellular orientation were accompanied by decreased expression of cytoskeletal elements, microtubule associated protein 2 and F-actin. These findings indicate that upon exposure to ethanol, developing L6 neurons manifest disruptions in Golgi apparatus and cytoskeletal elements which may in turn trigger selective and significant perturbations to primary neurite formation and neuronal polarity. PMID:22840816

The Dual Functions of WLIM1a in Cell Elongation and Secondary Wall Formation in Developing Cotton Fibers[C][W

PubMed Central

Han, Li-Bo; Li, Yuan-Bao; Wang, Hai-Yun; Wu, Xiao-Min; Li, Chun-Li; Luo, Ming; Wu, Shen-Jie; Kong, Zhao-Sheng; Pei, Yan; Jiao, Gai-Li; Xia, Gui-Xian

2013-01-01

LIN-11, Isl1 and MEC-3 (LIM)-domain proteins play pivotal roles in a variety of cellular processes in animals, but plant LIM functions remain largely unexplored. Here, we demonstrate dual roles of the WLIM1a gene in fiber development in upland cotton (Gossypium hirsutum). WLIM1a is preferentially expressed during the elongation and secondary wall synthesis stages in developing fibers. Overexpression of WLIM1a in cotton led to significant changes in fiber length and secondary wall structure. Compared with the wild type, fibers of WLIM1a-overexpressing plants grew longer and formed a thinner and more compact secondary cell wall, which contributed to improved fiber strength and fineness. Functional studies demonstrated that (1) WLIM1a acts as an actin bundler to facilitate elongation of fiber cells and (2) WLIM1a also functions as a transcription factor to activate expression of Phe ammonia lyase–box genes involved in phenylpropanoid biosynthesis to build up the secondary cell wall. WLIM1a localizes in the cytosol and nucleus and moves into the nucleus in response to hydrogen peroxide. Taken together, these results demonstrate that WLIM1a has dual roles in cotton fiber development, elongation, and secondary wall formation. Moreover, our study shows that lignin/lignin-like phenolics may substantially affect cotton fiber quality; this finding may guide cotton breeding for improved fiber traits. PMID:24220634

Dynamic Control of Chromosome Topology and Gene Expression by a Chromatin Modification.

PubMed

Bian, Qian; Anderson, Erika C; Brejc, Katjuša; Meyer, Barbara J

2018-02-22

The function of chromatin modification in establishing higher-order chromosome structure during gene regulation has been elusive. We dissected the machinery and mechanism underlying the enrichment of histone modification H4K20me1 on hermaphrodite X chromosomes during Caenorhabditis elegans dosage compensation and discovered a key role for H4K20me1 in regulating X-chromosome topology and chromosome-wide gene expression. Structural and functional analysis of the dosage compensation complex (DCC) subunit DPY-21 revealed a novel Jumonji C demethylase subfamily that converts H4K20me2 to H4K20me1 in worms and mammals. Inactivation of demethylase activity in vivo by genome editing eliminated H4K20me1 enrichment on X chromosomes of somatic cells, increased X-linked gene expression, reduced X-chromosome compaction, and disrupted X-chromosome conformation by diminishing the formation of topologically associated domains. H4K20me1 is also enriched on the inactive X of female mice, making our studies directly relevant to mammalian development. Unexpectedly, DPY-21 also associates specifically with autosomes of nematode germ cells in a DCC-independent manner to enrich H4K20me1 and trigger chromosome compaction. Thus, DPY-21 is an adaptable chromatin regulator. Its H4K20me2 demethylase activity can be harnessed during development for distinct biological functions by targeting it to diverse genomic locations through different mechanisms. In both somatic cells and germ cells, H4K20me1 enrichment modulates three-dimensional chromosome architecture, demonstrating the direct link between chromatin modification and higher-order chromosome structure. © 2017 Bian et al.; Published by Cold Spring Harbor Laboratory Press.

Complete characterization of the spasing (L-L) curve of a three-level quantum coherence enhanced spaser for design optimization

NASA Astrophysics Data System (ADS)

Kumarapperuma, Lakshitha; Premaratne, Malin; Jha, Pankaj K.; Stockman, Mark I.; Agrawal, Govind P.

2018-05-01

We demonstrate that it is possible to derive an approximate analytical expression to characterize the spasing (L-L) curve of a coherently enhanced spaser with 3-level gain-medium chromophores. The utility of this solution stems from the fact that it enables optimization of the large parameter space associated with spaser designing, a functionality not offered by the methods currently available in the literature. This is vital for the advancement of spaser technology towards the level of device realization. Owing to the compact nature of the analytical expressions, our solution also facilitates the grouping and identification of key processes responsible for the spasing action, whilst providing significant physical insights. Furthermore, we show that our expression generates results within 0.1% error compared to numerically obtained results for pumping rates higher than the spasing threshold, thereby drastically reducing the computational cost associated with spaser designing.

On the coefficients of integrated expansions and integrals of ultraspherical polynomials and their applications for solving differential equations

NASA Astrophysics Data System (ADS)

Doha, E. H.

2002-02-01

An analytical formula expressing the ultraspherical coefficients of an expansion for an infinitely differentiable function that has been integrated an arbitrary number of times in terms of the coefficients of the original expansion of the function is stated in a more compact form and proved in a simpler way than the formula suggested by Phillips and Karageorghis (27 (1990) 823). A new formula expressing explicitly the integrals of ultraspherical polynomials of any degree that has been integrated an arbitrary number of times of ultraspherical polynomials is given. The tensor product of ultraspherical polynomials is used to approximate a function of more than one variable. Formulae expressing the coefficients of differentiated expansions of double and triple ultraspherical polynomials in terms of the original expansion are stated and proved. Some applications of how to use ultraspherical polynomials for solving ordinary and partial differential equations are described.

HUNTING FOR YOUNG DISPERSING STAR CLUSTERS IN IC 2574

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pellerin, Anne; Meyer, Martin M.; Calzetti, Daniella

2012-12-01

Dissolving stellar groups are very difficult to detect using traditional surface photometry techniques. We have developed a method to find and characterize non-compact stellar systems in galaxies where the young stellar population can be spatially resolved. By carrying out photometry on individual stars, we are able to separate the luminous blue stellar population from the star field background. The locations of these stars are used to identify groups by applying the HOP algorithm, which are then characterized using color-magnitude and stellar density radial profiles to estimate age, size, density, and shape. We test the method on Hubble Space Telescope Advancedmore » Camera for Surveys archival images of IC 2574 and find 75 dispersed stellar groups. Of these, 20 highly dispersed groups are good candidates for dissolving systems. We find few compact systems with evidence of dissolution, potentially indicating that star formation in this galaxy occurs mostly in unbound clusters or groups. These systems indicate that the dispersion rate of groups and clusters in IC 2574 is at most 0.45 pc Myr{sup -1}. The location of the groups found with HOP correlate well with H I contour map features. However, they do not coincide with H I holes, suggesting that those holes were not created by star-forming regions.« less

Kaluza-Klein cosmology from five-dimensional Lovelock-Cartan theory

NASA Astrophysics Data System (ADS)

Castillo-Felisola, Oscar; Corral, Cristóbal; del Pino, Simón; Ramírez, Francisca

2016-12-01

We study the Kaluza-Klein dimensional reduction of the Lovelock-Cartan theory in five-dimensional spacetime, with a compact dimension of S1 topology. We find cosmological solutions of the Friedmann-Robertson-Walker class in the reduced spacetime. The torsion and the fields arising from the dimensional reduction induce a nonvanishing energy-momentum tensor in four dimensions. We find solutions describing expanding, contracting, and bouncing universes. The model shows a dynamical compactification of the extra dimension in some regions of the parameter space.

Houghton Mifflin Reading[c]. What Works Clearinghouse Intervention Report

ERIC Educational Resources Information Center

What Works Clearinghouse, 2008

2008-01-01

The "Houghton Mifflin Reading"[c] system is a reading program for instruction in grades K-6. It uses Big Books (authentic literature), anthologies, Read Alouds, and audio compact discs to provide step-by-step instruction in reading. According to the developer's website, "Houghton Mifflin Reading"[c] was developed based on the findings of the…

Shaping up the protein folding funnel by local interaction: lesson from a structure prediction study.

PubMed

Chikenji, George; Fujitsuka, Yoshimi; Takada, Shoji

2006-02-28

Predicting protein tertiary structure by folding-like simulations is one of the most stringent tests of how much we understand the principle of protein folding. Currently, the most successful method for folding-based structure prediction is the fragment assembly (FA) method. Here, we address why the FA method is so successful and its lesson for the folding problem. To do so, using the FA method, we designed a structure prediction test of "chimera proteins." In the chimera proteins, local structural preference is specific to the target sequences, whereas nonlocal interactions are only sequence-independent compaction forces. We find that these chimera proteins can find the native folds of the intact sequences with high probability indicating dominant roles of the local interactions. We further explore roles of local structural preference by exact calculation of the HP lattice model of proteins. From these results, we suggest principles of protein folding: For small proteins, compact structures that are fully compatible with local structural preference are few, one of which is the native fold. These local biases shape up the funnel-like energy landscape.

Shaping up the protein folding funnel by local interaction: Lesson from a structure prediction study

PubMed Central

Chikenji, George; Fujitsuka, Yoshimi; Takada, Shoji

2006-01-01

Predicting protein tertiary structure by folding-like simulations is one of the most stringent tests of how much we understand the principle of protein folding. Currently, the most successful method for folding-based structure prediction is the fragment assembly (FA) method. Here, we address why the FA method is so successful and its lesson for the folding problem. To do so, using the FA method, we designed a structure prediction test of “chimera proteins.” In the chimera proteins, local structural preference is specific to the target sequences, whereas nonlocal interactions are only sequence-independent compaction forces. We find that these chimera proteins can find the native folds of the intact sequences with high probability indicating dominant roles of the local interactions. We further explore roles of local structural preference by exact calculation of the HP lattice model of proteins. From these results, we suggest principles of protein folding: For small proteins, compact structures that are fully compatible with local structural preference are few, one of which is the native fold. These local biases shape up the funnel-like energy landscape. PMID:16488978

Whole Device Modeling of Compact Tori: Stability and Transport Modeling of C-2W

NASA Astrophysics Data System (ADS)

Dettrick, Sean; Fulton, Daniel; Lau, Calvin; Lin, Zhihong; Ceccherini, Francesco; Galeotti, Laura; Gupta, Sangeeta; Onofri, Marco; Tajima, Toshiki; TAE Team

2017-10-01

Recent experimental evidence from the C-2U FRC experiment shows that the confinement of energy improves with inverse collisionality, similar to other high beta toroidal devices, NSTX and MAST. This motivated the construction of a new FRC experiment, C-2W, to study the energy confinement scaling at higher electron temperature. Tri Alpha Energy is working towards catalysing a community-wide collaboration to develop a Whole Device Model (WDM) of Compact Tori. One application of the WDM is the study of stability and transport properties of C-2W using two particle-in-cell codes, ANC and FPIC. These codes can be used to find new stable operating points, and to make predictions of the turbulent transport at those points. They will be used in collaboration with the C-2W experimental program to validate the codes against C-2W, mitigate experimental risk inherent in the exploration of new parameter regimes, accelerate the optimization of experimental operating scenarios, and to find operating points for future FRC reactor designs.

7 Millimeter VLBA Observations of Sagittarius A*

NASA Astrophysics Data System (ADS)

Bower, Geoffrey C.; Backer, Donald C.

1998-04-01

We present 7 mm Very Long Baseline Array observations of the compact nonthermal radio source in the Galactic center, Sagittarius A*. These observations confirm the hypothesis that the image of Sgr A* is a resolved elliptical Gaussian caused by the scattering of an intervening thermal plasma. The measured major axis of Sgr A* is 0.76+/-0.04 mas, consistent with the predicted scattering size of 0.67+/-0.03. We find an axial ratio of 0.73+/-0.10 and a position angle of 77.0d +/- 7.4d. These results are fully consistent with VLBI observations at longer wavelengths and at 3 mm. We find no evidence for any additional compact structure to a limit of 35 mJy. The underlying radio source must be smaller than 4.1 AU for a Galactocentric distance of 8.5 kpc. This result is consistent with the conclusion that the radio emission from Sgr A* results from synchrotron or cyclo-synchrotron radiation of gas in the vicinity of a black hole with a mass near 106 Msolar.

Optimizing promoters for recombinant adeno-associated virus-mediated gene expression in the peripheral and central nervous system using self-complementary vectors.

PubMed

Gray, Steven J; Foti, Stacey B; Schwartz, Joel W; Bachaboina, Lavanya; Taylor-Blake, Bonnie; Coleman, Jennifer; Ehlers, Michael D; Zylka, Mark J; McCown, Thomas J; Samulski, R Jude

2011-09-01

With the increased use of small self-complementary adeno-associated viral (AAV) vectors, the design of compact promoters becomes critical for packaging and expressing larger transgenes under ubiquitous or cell-specific control. In a comparative study of commonly used 800-bp cytomegalovirus (CMV) and chicken β-actin (CBA) promoters, we report significant differences in the patterns of cell-specific gene expression in the central and peripheral nervous systems. The CMV promoter provides high initial neural expression that diminishes over time. The CBA promoter displayed mostly ubiquitous and high neural expression, but substantially lower expression in motor neurons (MNs). We report the creation of a novel hybrid form of the CBA promoter (CBh) that provides robust long-term expression in all cells observed with CMV or CBA, including MNs. To develop a short neuronal promoter to package larger transgenes into AAV vectors, we also found that a 229-bp fragment of the mouse methyl-CpG-binding protein-2 (MeCP2) promoter was able to drive neuron-specific expression within the CNS. Thus the 800-bp CBh promoter provides strong, long-term, and ubiquitous CNS expression whereas the MeCP2 promoter allows an extra 570-bp packaging capacity, with low and mostly neuronal expression within the CNS, similar to the MeCP2 transcription factor.

Compact heat and mass exchangers of the plate fin type in thermal sorption systems: Application in an absorption heat pump with the working pair CH3OH-LiBr/ZnBr2

NASA Astrophysics Data System (ADS)

Becker, Harry

The possible application of Compact Heat and Mass Exchangers (CHME) in a gas fired Absorption Heat Pump (AHP) for domestic heating is studied. The above mentioned heat and mass exchangers are of the plate type. The space between the parallel and plain plates is filled up with corrugated plates of a certain height. The plain and finned plates are stacked and welded together. This gives a heat and mass exchanger which is very compact, expressed by a high area density (m2/m3). This leads to heat and mass transfer processes with small temperature and concentration differences. For testing purposes a pilot plant was built using the above type of components in order to test their heat and/or mass transfer performance. Only the generator is of the Shell And Tube (SAT) type. As the working pair, CH3OH - LiBr/ ZnBr2 was chosen, with the alcohol as the solvent and the salt mixture as the absorbent. This leads to sub atmospheric working pressures with only solvent in the vapor phase. Three series of experiments have been carried out, during which the input parameters were varied over a certain range. It is concluded that the plate fin CHMES are very suitable for application in an AHP for domestic heating purposes.

Remote Sensing-based Models of Soil Vulnerability to Compaction and Erosion from Off-highway Vehicles

NASA Astrophysics Data System (ADS)

Villarreal, M. L.; Webb, R. H.; Norman, L.; Psillas, J.; Rosenberg, A.; Carmichael, S.; Petrakis, R.; Sparks, P.

2014-12-01

Intensive off-road vehicle use for immigration, smuggling, and security of the United States-Mexico border has prompted concerns about long-term human impacts on sensitive desert ecosystems. To help managers identify areas susceptible to soil erosion from vehicle disturbances, we developed a series of erosion potential models based on factors from the Revised Universal Soil Loss Equation (RUSLE), with particular focus on the management factor (P-factor) and vegetation cover (C-factor). To better express the vulnerability of soils to human disturbances, a soil compaction index (applied as the P-factor) was calculated as the difference in saturated hydrologic conductivity (Ks) between disturbed and undisturbed soils, which was then scaled up to remote sensing-based maps of vehicle tracks and digital soils maps. The C-factor was improved using a satellite-based vegetation index, which was better correlated with estimated ground cover (r2 = 0.77) than data derived from regional land cover maps (r2 = 0.06). RUSLE factors were normalized to give equal weight to all contributing factors, which provided more management-specific information on vulnerable areas where vehicle compaction of sensitive soils intersects with steep slopes and low vegetation cover. Resulting spatial data on vulnerability and erosion potential provide land managers with information to identify critically disturbed areas and potential restoration sites where off-road driving should be restricted to reduce further degradation.

Compact tomato seedlings and plants upon overexpression of a tomato chromatin remodelling ATPase gene.

PubMed

Folta, Adam; Bargsten, Joachim W; Bisseling, Ton; Nap, Jan-Peter; Mlynarova, Ludmila

2016-02-01

Control of plant growth is an important aspect of crop productivity and yield in agriculture. Overexpression of the AtCHR12/23 genes in Arabidopsis thaliana reduced growth habit without other morphological changes. These two genes encode Snf2 chromatin remodelling ATPases. Here, we translate this approach to the horticultural crop tomato (Solanum lycopersicum). We identified and cloned the single tomato ortholog of the two Arabidopsis Snf2 genes, designated SlCHR1. Transgenic tomato plants (cv. Micro-Tom) that constitutively overexpress the coding sequence of SlCHR1 show reduced growth in all developmental stages of tomato. This confirms that SlCHR1 combines the functions of both Arabidopsis genes in tomato. Compared to the wild type, the transgenic seedlings of tomato have significantly shorter roots, hypocotyls and reduced cotyledon size. Transgenic plants have a much more compact growth habit with markedly reduced plant height, severely compacted reproductive structures with smaller flowers and smaller fruits. The results indicate that either GMO-based or non-GMO-based approaches to modulate the expression of chromatin remodelling ATPase genes could develop into methods to control plant growth, for example to replace the use of chemical growth retardants. This approach is likely to be applicable and attractive for any crop for which growth habit reduction has added value. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Interplay between writhe and knotting for swollen and compact polymers.

PubMed

Baiesi, Marco; Orlandini, Enzo; Whittington, Stuart G

2009-10-21

The role of the topology and its relation with the geometry of biopolymers under different physical conditions is a nontrivial and interesting problem. Aiming at understanding this issue for a related simpler system, we use Monte Carlo methods to investigate the interplay between writhe and knotting of ring polymers in good and poor solvents. The model that we consider is interacting self-avoiding polygons on the simple cubic lattice. For polygons with fixed knot type, we find a writhe distribution whose average depends on the knot type but is insensitive to the length N of the polygon and to solvent conditions. This "topological contribution" to the writhe distribution has a value that is consistent with that of ideal knots. The standard deviation of the writhe increases approximately as square root(N) in both regimes, and this constitutes a geometrical contribution to the writhe. If the sum over all knot types is considered, the scaling of the standard deviation changes, for compact polygons, to approximately N(0.6). We argue that this difference between the two regimes can be ascribed to the topological contribution to the writhe that, for compact chains, overwhelms the geometrical one, thanks to the presence of a large population of complex knots at relatively small values of N. For polygons with fixed writhe, we find that the knot distribution depends on the chosen writhe, with the occurrence of achiral knots being considerably suppressed for large writhe. In general, the occurrence of a given knot thus depends on a nontrivial interplay between writhe, chain length, and solvent conditions.

DNA survival and physical and histological properties of heat-induced alterations in burnt bones.

PubMed

Imaizumi, K; Taniguchi, K; Ogawa, Y

2014-05-01

During forensic casework, it is vital to be able to obtain valuable information from burnt bone fragments to ascertain the identity of the victim. Here, we report the findings of an experimental study on burnt bovine compact bone segments. Compact bones were cut to size and heated in an electric furnace at a temperature range of 100–1,100 °C with 100 °C increments. Heat-induced alterations to the bone color,weight, volume, and density were monitored using gross morphology and micro-focus X-ray computed tomography.We found that the increase in temperature caused the color of the compact bones to change in order of yellow, brown, gray,and white. In contrast to the weight reduction that occurred immediately after burning, we measured no significant reduction in volume even at 600 °C; however, volume reduced drastically once the temperature reached 700 °C. Light microscopic histological observations of burnt bone revealed heat induced alterations such as cracking and separation of the osteons at higher temperatures. In addition to these findings,we sought to examine the survival of DNA in the burnt bones using polymerase chain reaction of mitochondrial DNA. No amplification was found in the specimens burnt at 250 °C or higher, indicating the likely difficulty in testing the DNA of burnt bones from forensic casework. The results of this study will enable an estimation of the burning temperatures of burnt bones found in forensic cases and will provide an important framework with which to interpret data obtained during anthropological testing and DNA typing.

Geometric algebra description of polarization mode dispersion, polarization-dependent loss, and Stokes tensor transformations.

PubMed

Soliman, George; Yevick, David; Jessop, Paul

2014-09-01

This paper demonstrates that numerous calculations involving polarization transformations can be condensed by employing suitable geometric algebra formalism. For example, to describe polarization mode dispersion and polarization-dependent loss, both the material birefringence and differential loss enter as bivectors and can be combined into a single symmetric quantity. Their frequency and distance evolution, as well as that of the Stokes vector through an optical system, can then each be expressed as a single compact expression, in contrast to the corresponding Mueller matrix formulations. The intrinsic advantage of the geometric algebra framework is further demonstrated by presenting a simplified derivation of generalized Stokes parameters that include the electric field phase. This procedure simultaneously establishes the tensor transformation properties of these parameters.

iPSC-derived cardiomyocytes reveal abnormal TGFβ signaling in left ventricular non-compaction cardiomyopathy

PubMed Central

Kodo, Kazuki; Ong, Sang-Ging; Jahanbani, Fereshteh; Termglinchan, Vittavat; Hirono, Keiichi; InanlooRahatloo, Kolsoum; Ebert, Antje D.; Shukla, Praveen; Abilez, Oscar J.; Churko, Jared M.; Karakikes, Ioannis; Jung, Gwanghyun; Ichida, Fukiko; Wu, Sean M.; Snyder, Michael P.; Bernstein, Daniel; Wu, Joseph C.

2016-01-01

Left ventricular non-compaction (LVNC) is the third most prevalent cardiomyopathy in children and its pathogenesis has been associated with the developmental defect of the embryonic myocardium. We show that patient-specific induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs) generated from LVNC patients carrying a mutation in the cardiac transcription factor TBX20 recapitulate a key aspect of the pathological phenotype at the single-cell level and was associated with perturbed transforming growth factor beta (TGFβ) signaling. LVNC iPSC-CMs have decreased proliferative capacity due to abnormal activation of TGFβ signaling. TBX20 regulates the expression of TGFβ signaling modifiers including a known genetic cause of LVNC, PRDM16, and genome editing of PRDM16 caused proliferation defects in iPSC-CMs. Inhibition of TGFβ signaling and genome correction of the TBX20 mutation were sufficient to reverse the disease phenotype. Our study demonstrates that iPSC-CMs are a useful tool for the exploration of pathological mechanisms underlying poorly understood cardiomyopathies including LVNC. PMID:27642787

Resistance Curves in the Tensile and Compressive Longitudinal Failure of Composites

NASA Technical Reports Server (NTRS)

Camanho, Pedro P.; Catalanotti, Giuseppe; Davila, Carlos G.; Lopes, Claudio S.; Bessa, Miguel A.; Xavier, Jose C.

2010-01-01

This paper presents a new methodology to measure the crack resistance curves associated with fiber-dominated failure modes in polymer-matrix composites. These crack resistance curves not only characterize the fracture toughness of the material, but are also the basis for the identification of the parameters of the softening laws used in the analytical and numerical simulation of fracture in composite materials. The method proposed is based on the identification of the crack tip location by the use of Digital Image Correlation and the calculation of the J-integral directly from the test data using a simple expression derived for cross-ply composite laminates. It is shown that the results obtained using the proposed methodology yield crack resistance curves similar to those obtained using FEM-based methods in compact tension carbon-epoxy specimens. However, it is also shown that the Digital Image Correlation based technique can be used to extract crack resistance curves in compact compression tests for which FEM-based techniques are inadequate.

The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling

PubMed Central

Su, Ting; Cheng, Jingdong; Sohmen, Daniel; Hedman, Rickard; Berninghausen, Otto; von Heijne, Gunnar; Wilson, Daniel N; Beckmann, Roland

2017-01-01

Interaction between the nascent polypeptide chain and the ribosomal exit tunnel can modulate the rate of translation and induce translational arrest to regulate expression of downstream genes. The ribosomal tunnel also provides a protected environment for initial protein folding events. Here, we present a 2.9 Å cryo-electron microscopy structure of a ribosome stalled during translation of the extremely compacted VemP nascent chain. The nascent chain forms two α-helices connected by an α-turn and a loop, enabling a total of 37 amino acids to be observed within the first 50–55 Å of the exit tunnel. The structure reveals how α-helix formation directly within the peptidyltransferase center of the ribosome interferes with aminoacyl-tRNA accommodation, suggesting that during canonical translation, a major role of the exit tunnel is to prevent excessive secondary structure formation that can interfere with the peptidyltransferase activity of the ribosome. DOI: http://dx.doi.org/10.7554/eLife.25642.001 PMID:28556777

Myelin in Cartilaginous Fish

PubMed Central

de Bellard, Maria Elena

2016-01-01

Myelin is probably one of the most fascinating and innovative biological acquisition: a glia plasma membrane tightly wrapped around an axon and insulating it. Chondrichthyans (cartilaginous fishes) form a large group of vertebrates, and they are among oldest extant jawed vertebrate lineage. It has been known from studies 150 years ago, that they are positioned at the root of the successful appearance of compact myelin and main adhesive proteins in vertebrates. More importantly, the ultrastructure of their compact myelin is indistinguishable from the one observed in tetrapods and the first true myelin basic protein (MBP) and myelin protein zero (MPZ) seem to have originated on cartilaginous fish or their ancestors, the placoderms. Thus, the study of their myelin formation would bring new insights in vertebrate’s myelin evolution. Chondrichthyans central nervous system (CNS) myelin composition is also very similar to peripheral nervous system (PNS) myelin composition. And while they lack true proteolipid protein (PLP) like tetrapods, they express a DM-like protein in their myelin. PMID:26776480

Dynamics of in vivo ASC speck formation

PubMed Central

2017-01-01

Activated danger or pathogen sensors trigger assembly of the inflammasome adaptor ASC into specks, large signaling platforms considered hallmarks of inflammasome activation. Because a lack of in vivo tools has prevented the study of endogenous ASC dynamics, we generated a live ASC reporter through CRISPR/Cas9 tagging of the endogenous gene in zebrafish. We see strong ASC expression in the skin and other epithelia that act as barriers to insult. A toxic stimulus triggered speck formation and rapid pyroptosis in keratinocytes in vivo. Macrophages engulfed and digested that speck-containing, pyroptotic debris. A three-dimensional, ultrastructural reconstruction, based on correlative light and electron microscopy of the in vivo assembled specks revealed a compact network of highly intercrossed filaments, whereas pyrin domain (PYD) or caspase activation and recruitment domain alone formed filamentous aggregates. The effector caspase is recruited through PYD, whose overexpression induced pyroptosis but only after substantial delay. Therefore, formation of a single, compact speck and rapid cell-death induction in vivo requires a full-length ASC. PMID:28701426

Establishment of oct4:gfp transgenic zebrafish line for monitoring cellular multipotency by GFP fluorescence.

PubMed

Kato, Hiroyuki; Abe, Kota; Yokota, Shinpei; Matsuno, Rinta; Mikekado, Tsuyoshi; Yokoi, Hayato; Suzuki, Tohru

2015-01-01

The establishment of induced pluripotent stem (iPS) cell technology in fish could facilitate the establishment of novel cryopreservation techniques for storing selected aquaculture strains as frozen cells. In order to apply iPS cell technology to fish, we established a transgenic zebrafish line, Tg(Tru.oct4:EGFP), using green fluorescent protein (GFP) expression under the control of the oct4 gene promoter as a marker to evaluate multipotency in iPS cell preparations. We used the oct4 promoter from fugu (Takifugu rubripes) due to the compact nature of the fugu genome and to facilitate future applications of this technology in marine fishes. During embryogenesis, maternal GFP fluorescence was observed at the cleavage stage and zygotic GFP expression was observed from the start of the shield stage until approximately 24 h after fertilization. gfp messenger RNA (mRNA) was expressed by whole embryonic cells at the shield stage, and then restricted to the caudal neural tube in the latter stages of embryogenesis. These observations showed that GFP fluorescence and the regulation of gfp mRNA expression by the exogenous fugu oct4 promoter are well suited for monitoring endogenous oct4 mRNA expression in embryos. Bisulfite sequencing revealed that the rate of CpG methylation in the transgenic oct4 promoter was high in adult cells (98%) and low in embryonic cells (37%). These findings suggest that, as with the endogenous oct4 promoter, demethylation and methylation both take place normally in the transgenic oct4 promoter during embryogenesis. The embryonic cells harvested at the shield stage formed embryonic body-like cellular aggregates and maintained GFP fluorescence for 6 d when cultured on Transwell-COL Permeable Supports or a feeder layer of adult fin cells. Loss of GFP fluorescence by cultured cells was correlated with cellular differentiation. We consider that the Tg(Tru.oct4:EGFP) zebrafish line established here is well suited for monitoring multipotency in multipotent zebrafish cell cultures and for iPS cell preparation.

Approaching the Post-Newtonian Regime with Numerical Relativity: A Compact-Object Binary Simulation Spanning 350 Gravitational-Wave Cycles

NASA Astrophysics Data System (ADS)

Szilágyi, Béla; Blackman, Jonathan; Buonanno, Alessandra; Taracchini, Andrea; Pfeiffer, Harald P.; Scheel, Mark A.; Chu, Tony; Kidder, Lawrence E.; Pan, Yi

2015-07-01

We present the first numerical-relativity simulation of a compact-object binary whose gravitational waveform is long enough to cover the entire frequency band of advanced gravitational-wave detectors, such as LIGO, Virgo, and KAGRA, for mass ratio 7 and total mass as low as 45.5 M⊙ . We find that effective-one-body models, either uncalibrated or calibrated against substantially shorter numerical-relativity waveforms at smaller mass ratios, reproduce our new waveform remarkably well, with a negligible loss in detection rate due to modeling error. In contrast, post-Newtonian inspiral waveforms and existing calibrated phenomenological inspiral-merger-ringdown waveforms display greater disagreement with our new simulation. The disagreement varies substantially depending on the specific post-Newtonian approximant used.

Numerical relativity reaching into post-Newtonian territory: a compact-object binary simulation spanning 350 gravitational-wave cycles

NASA Astrophysics Data System (ADS)

Scheel, Mark; Szilagyi, Bela; Blackman, Jonathan; Chu, Tony; Kidder, Lawrence; Pfeiffer, Harald; Buonanno, Alessandra; Pan, Yi; Taracchini, Andrea; SXS Collaboration

2015-04-01

We present the first numerical-relativity simulation of a compact-object binary whose gravitational waveform is long enough to cover the entire frequency band of advanced gravitational-wave detectors such as LIGO, Virgo and KAGRA, for mass ratio 7 and total mass as low as 45 . 5M⊙ . We find that effective-one-body models, either uncalibrated or calibrated against substantially shorter numerical-relativity waveforms at smaller mass ratios, reproduce our new waveform remarkably well, with a loss in detection rate due to modeling error smaller than 0 . 3 % . In contrast, post-Newtonian inspiral waveforms and existing phenomenological inspiral-merger-ringdown waveforms display much greater disagreement with our new simulation. The disagreement varies substantially depending on the specific post-Newtonian approximant used.

Discovery of interaction signatures in the Hickson Compact Group 88

NASA Astrophysics Data System (ADS)

Brosch, Noah

2015-08-01

I describe new observations of the Hickson Compact Group 88 (HCG88) obtained during the commissioning of a new telescope at the Wise Observatory. The observations that reach low surface brightness levels reveal a diffuse, ~20-kpc long low-surface-brightness tail emerging from the brightest component (NGC 6878) to the NW, and possibly a morphological abnormally in component B (NGC 6977). The N6878 tail could explain the asymmetry in this galaxy’s optical rotation curve. These findings show that significant interactions, including possible galactic cannibalism, have taken place in at least two galaxies of this group, contrary to previous claims that HCG88 is in a very early stage of interaction. This work emphasizes the surprisingly interesting results that can be obtained from deep imaging of interesting targets.

Neutron stars in Horndeski gravity

NASA Astrophysics Data System (ADS)

Maselli, Andrea; Silva, Hector O.; Minamitsuji, Masato; Berti, Emanuele

2016-06-01

Horndeski's theory of gravity is the most general scalar-tensor theory with a single scalar whose equations of motion contain at most second-order derivatives. A subsector of Horndeski's theory known as "Fab Four" gravity allows for dynamical self-tuning of the quantum vacuum energy, and therefore it has received particular attention in cosmology as a possible alternative to the Λ CDM model. Here we study compact stars in Fab Four gravity, which includes as special cases general relativity ("George"), Einstein-dilaton-Gauss-Bonnet gravity ("Ringo"), theories with a nonminimal coupling with the Einstein tensor ("John"), and theories involving the double-dual of the Riemann tensor ("Paul"). We generalize and extend previous results in theories of the John class and were not able to find realistic compact stars in theories involving the Paul class.

Approaching the Post-Newtonian Regime with Numerical Relativity: A Compact-Object Binary Simulation Spanning 350 Gravitational-Wave Cycles.

PubMed

Szilágyi, Béla; Blackman, Jonathan; Buonanno, Alessandra; Taracchini, Andrea; Pfeiffer, Harald P; Scheel, Mark A; Chu, Tony; Kidder, Lawrence E; Pan, Yi

2015-07-17

We present the first numerical-relativity simulation of a compact-object binary whose gravitational waveform is long enough to cover the entire frequency band of advanced gravitational-wave detectors, such as LIGO, Virgo, and KAGRA, for mass ratio 7 and total mass as low as 45.5M_{⊙}. We find that effective-one-body models, either uncalibrated or calibrated against substantially shorter numerical-relativity waveforms at smaller mass ratios, reproduce our new waveform remarkably well, with a negligible loss in detection rate due to modeling error. In contrast, post-Newtonian inspiral waveforms and existing calibrated phenomenological inspiral-merger-ringdown waveforms display greater disagreement with our new simulation. The disagreement varies substantially depending on the specific post-Newtonian approximant used.

Compact Binary Progenitors of Short Gamma-Ray Bursts

NASA Technical Reports Server (NTRS)

Giacomazzo, Bruno; Perna, Rosalba; Rezzolla, Luciano; Troja, Eleonora; Lazzati, Davide

2013-01-01

In recent years, detailed observations and accurate numerical simulations have provided support to the idea that mergers of compact binaries containing either two neutron stars (NSs) or an NS and a black hole (BH) may constitute the central engine of short gamma-ray bursts (SGRBs). The merger of such compact binaries is expected to lead to the production of a spinning BH surrounded by an accreting torus. Several mechanisms can extract energy from this system and power the SGRBs. Here we connect observations and numerical simulations of compact binary mergers, and use the current sample of SGRBs with measured energies to constrain the mass of their powering tori. By comparing the masses of the tori with the results of fully general-relativistic simulations, we are able to infer the properties of the binary progenitors that yield SGRBs. By assuming a constant efficiency in converting torus mass into jet energy epsilon(sub jet) = 10%, we find that most of the tori have masses smaller than 0.01 Solar M, favoring "high-mass" binary NSs mergers, i.e., binaries with total masses approx >1.5 the maximum mass of an isolated NS. This has important consequences for the gravitational wave signals that may be detected in association with SGRBs, since "high-mass" systems do not form a long-lived hypermassive NS after the merger. While NS-BH systems cannot be excluded to be the engine of at least some of the SGRBs, the BH would need to have an initial spin of approx. 0.9 or higher.

Reservoir creep and induced seismicity: inferences from geomechanical modeling of gas depletion in the Groningen field

NASA Astrophysics Data System (ADS)

van Wees, Jan-Diederik; Osinga, Sander; Van Thienen-Visser, Karin; Fokker, Peter A.

2018-03-01

The Groningen gas field in the Netherlands experienced an immediate reduction in seismic events in the year following a massive cut in production. This reduction is inconsistent with existing models of seismicity predictions adopting compaction strains as proxy, since reservoir creep would then result in a more gradual reduction of seismic events after a production stop. We argue that the discontinuity in seismic response relates to a physical discontinuity in stress loading rate on faults upon the arrest of pressure change. The stresses originate from a combination of the direct poroelastic effect through the pressure changes and the delayed effect of ongoing compaction after cessation of reservoir production. Both mechanisms need to be taken into account. To this end, we employed finite-element models in a workflow that couples Kelvin-Chain reservoir creep with a semi-analytical approach for the solution of slip and seismic moment from the predicted stress change. For ratios of final creep and elastic compaction up to 5, the model predicts that the cumulative seismic moment evolution after a production stop is subject to a very moderate increase, 2-10 times less than the values predicted by the alternative approaches using reservoir compaction strain as proxy. This is in agreement with the low seismicity in the central area of the Groningen field immediately after reduction in production. The geomechanical model findings support scope for mitigating induced seismicity through adjusting rates of pressure change by cutting down production.

Constraining the number of compact remnants near Sgr A*

NASA Astrophysics Data System (ADS)

Deegan, Patrick; Nayakshin, Sergei

2007-05-01

Due to dynamical friction stellar mass black holes and neutron stars are expected to form high-density cusps in the inner parsec of our Galaxy. These compact remnants, expected to number around 20000, may be accreting cold dense gas present there, and give rise to potentially observable X-ray emission. Here we build a simple but detailed time-dependent model of such emission. The possibility that these accretion flows are radiatively inefficient is taken into account and brings in some uncertainty in the conclusions. Despite this uncertainty, we find that at least several X-ray sources of this nature should be detectable with Chandra at any one time. Turning this issue around, we also ask a question of what current observational constraints might be telling us about the total number of compact remnants. In our `best guess' model, a cusp of ~40000 remnants overpredicts the number of discrete sources and the total X-ray luminosity of the inner parsec, and is hence ruled out. In the most radiatively inefficient scenario that we consider, the radiative efficiency is set to be as small as ɛ = 10-5. In this rather unlikely scenario, a cusp of ~40000 black holes would be allowed by the data, but several individual sources should still be visible. Future observations of the distribution and orbits of the cold ionized gas in the inner parsec of our Galaxy will put tighter constraints on the cusp of compact remnants.

Weighted compactness function based label propagation algorithm for community detection

NASA Astrophysics Data System (ADS)

Zhang, Weitong; Zhang, Rui; Shang, Ronghua; Jiao, Licheng

2018-02-01

Community detection in complex networks, is to detect the community structure with the internal structure relatively compact and the external structure relatively sparse, according to the topological relationship among nodes in the network. In this paper, we propose a compactness function which combines the weight of nodes, and use it as the objective function to carry out the node label propagation. Firstly, according to the node degree, we find the sets of core nodes which have great influence on the network. The more the connections between the core nodes and the other nodes are, the larger the amount of the information these kernel nodes receive and transform. Then, according to the similarity of the nodes between the core nodes sets and the nodes degree, we assign weights to the nodes in the network. So the label of the nodes with great influence will be the priority in the label propagation process, which effectively improves the accuracy of the label propagation. The compactness function between nodes and communities in this paper is based on the nodes influence. It combines the connections between nodes and communities with the degree of the node belongs to its neighbor communities based on calculating the node weight. The function effectively uses the information of nodes and connections in the network. The experimental results show that the proposed algorithm can achieve good results in the artificial network and large-scale real networks compared with the 8 contrast algorithms.

The Intermodal Bike: multi-modal integration of cycling mobility through product and process innovations in bicycle design.

PubMed

Tosi, Francesca; Belli, Alessandro; Rinaldi, Alessandra; Tucci, Grazia

2012-01-01

The paper presents the early results of the UE-FP7 project "The Intermodal Bike". The research aim is to provide a super-compactable, super-lightweight folding bicycle as a realistic solution to graft the cycling mode onto the root of the public or private transportation systems. The folding bikes now on the international market reach weighs between 12-15 kg, with a variable footprint but occupying -when compacted- an average volume of about 100 liters. To encourage the use of this vehicle and to extend it to a larger number of users with different characteristics, the research project has set its goal in increasing as possible compactness and light weight, creating a bicycle with a volume when compacted of 20 liters (reduction factor =5), with a shape of 48 × 36 × 12 cm and a weight of 5 kg. max., ensuring stability and improving vehicle usability and efficiency, during the ride and in the phase of bike folding. To achieve this goal ergonomic and usability tests have been carried out. The tests allowed to find a posture that would ensure efficiency and comfort in the ride to as many users as possible. Parallel tests were made on the vehicle usability in the urban transport system and intermodal. The need for light weight has required special studies on the optimization of the vehicle's architecture and research on super-lightweight materials.

OUTWARD MOTION OF POROUS DUST AGGREGATES BY STELLAR RADIATION PRESSURE IN PROTOPLANETARY DISKS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tazaki, Ryo; Nomura, Hideko, E-mail: rtazaki@kusastro.kyoto-u.ac.jp

2015-02-01

We study the dust motion at the surface layer of protoplanetary disks. Dust grains in the surface layer migrate outward owing to angular momentum transport via gas-drag force induced by the stellar radiation pressure. In this study we calculate the mass flux of the outward motion of compact grains and porous dust aggregates by the radiation pressure. The radiation pressure force for porous dust aggregates is calculated using the T-Matrix Method for the Clusters of Spheres. First, we confirm that porous dust aggregates are forced by strong radiation pressure even if they grow to be larger aggregates, in contrast tomore » homogeneous and spherical compact grains, for which radiation pressure efficiency becomes lower when their sizes increase. In addition, we find that the outward mass flux of porous dust aggregates with monomer size of 0.1 μm is larger than that of compact grains by an order of magnitude at the disk radius of 1 AU, when their sizes are several microns. This implies that large compact grains like calcium-aluminum-rich inclusions are hardly transported to the outer region by stellar radiation pressure, whereas porous dust aggregates like chondritic-porous interplanetary dust particles are efficiently transported to the comet formation region. Crystalline silicates are possibly transported in porous dust aggregates by stellar radiation pressure from the inner hot region to the outer cold cometary region in the protosolar nebula.« less

Switching probability of all-perpendicular spin valve nanopillars

NASA Astrophysics Data System (ADS)

Tzoufras, M.

2018-05-01

In all-perpendicular spin valve nanopillars the probability density of the free-layer magnetization is independent of the azimuthal angle and its evolution equation simplifies considerably compared to the general, nonaxisymmetric geometry. Expansion of the time-dependent probability density to Legendre polynomials enables analytical integration of the evolution equation and yields a compact expression for the practically relevant switching probability. This approach is valid when the free layer behaves as a single-domain magnetic particle and it can be readily applied to fitting experimental data.

Coincidence and covariance data acquisition in photoelectron and -ion spectroscopy. I. Formal theory

NASA Astrophysics Data System (ADS)

Mikosch, Jochen; Patchkovskii, Serguei

2013-10-01

We derive a formal theory of noisy Poisson processes with multiple outcomes. We obtain simple, compact expressions for the probability distribution function of arbitrarily complex composite events and its moments. We illustrate the utility of the theory by analyzing properties of coincidence and covariance photoelectron-photoion detection involving single-ionization events. The results and techniques introduced in this work are directly applicable to more general coincidence and covariance experiments, including multiple ionization and multiple-ion fragmentation pathways.

Theory of unfolded cyclotron accelerator

NASA Astrophysics Data System (ADS)

Rax, J.-M.; Robiche, J.

2010-10-01

An acceleration process based on the interaction between an ion, a tapered periodic magnetic structure, and a circularly polarized oscillating electric field is identified and analyzed, and its potential is evaluated. A Hamiltonian analysis is developed in order to describe the interplay between the cyclotron motion, the electric acceleration, and the magnetic modulation. The parameters of this universal class of magnetic modulation leading to continuous acceleration without Larmor radius increase are expressed analytically. Thus, this study provides the basic scaling of what appears as a compact unfolded cyclotron accelerator.

Parametric number covariance in quantum chaotic spectra.

PubMed

Vinayak; Kumar, Sandeep; Pandey, Akhilesh

2016-03-01

We study spectral parametric correlations in quantum chaotic systems and introduce the number covariance as a measure of such correlations. We derive analytic results for the classical random matrix ensembles using the binary correlation method and obtain compact expressions for the covariance. We illustrate the universality of this measure by presenting the spectral analysis of the quantum kicked rotors for the time-reversal invariant and time-reversal noninvariant cases. A local version of the parametric number variance introduced earlier is also investigated.

Dedifferentiation into blastomere-like cancer stem cells via formation of polyploid giant cancer cells

PubMed Central

Niu, N; Mercado-Uribe, I; Liu, J

2017-01-01

Our recent perplexing findings that polyploid giant cancer cells (PGCCs) acquired embryonic-like stemness and were capable of tumor initiation raised two important unanswered questions: how do PGCCs acquire such stemness, and to which stage of normal development do PGCCs correspond. Intriguingly, formation of giant cells due to failed mitosis/cytokinesis is common in the blastomere stage of the preimplantation embryo. However, the relationship between PGCCs and giant blastomeres has never been studied. Here, we tracked the fate of single PGCCs following paclitaxel-induced mitotic failure. Morphologically, early spheroids derived from PGCCs were indistinguishable from human embryos at the blastomere, polyploid blastomere, compaction, morula and blastocyst-like stages by light, scanning electron or three-dimensional confocal scanning microscopy. Formation of PGCCs was associated with activation of senescence, while budding of daughter cells was associated with senescence escape. PGCCs showed time- and space-dependent activation of expression of the embryonic stem cell markers OCT4, NANOG, SOX2 and SSEA1 and lacked expression of Xist. PGCCs acquired mesenchymal phenotype and were capable of differentiation into all three germ layers in vitro. The embryonic-like stemness of PGCCs was associated with nuclear accumulation of YAP, a key mediator of the Hippo pathway. Spheroids derived from single PGCCs grew into a wide spectrum of human neoplasms, including germ cell tumors, high-grade and low-grade carcinomas and benign tissues. Daughter cells derived from PGCCs showed attenuated capacity for invasion and increased resistance to paclitaxel. We also observed formation of PGCCs and dedifferentiation in ovarian cancer specimens from patients treated with chemotherapy. Taken together, our findings demonstrate that PGCCs represent somatic equivalents of blastomeres, the most primitive cancer stem cells reported to date. Thus, our studies reveal an evolutionarily conserved archaic embryonic program in somatic cells that can be de-repressed for oncogenesis. Our work offers a new paradigm for cancer origin and disease relapse. PMID:28436947

Spinning Q-balls in the complex signum-Gordon model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Arodz, H.; Karkowski, J.; Swierczynski, Z.

2009-09-15

Rotational excitations of compact Q-balls in the complex signum-Gordon model in 2+1 dimensions are investigated. We find that almost all such spinning Q-balls have the form of a ring of strictly finite width. In the limit of large angular momentum M{sub z}, their energy is proportional to |M{sub z}|{sup 1/5}.

10 Steps in Writing the Research Paper. Fourth Edition.

ERIC Educational Resources Information Center

Markman, Roberta H.; And Others

Retaining the compact format of earlier editions, this updated book presents techniques and models for high school and college students to write successful research papers. After a preface and an introduction to research, the book discusses the 10 steps in writing a research paper: (1) find a subject; (2) read a general article; (3) formulate a…

On Compact Book Storage in Libraries.

ERIC Educational Resources Information Center

Ravindran, Arunachalam

The optimal storage of books by size in libraries is considered in this paper. It is shown that for a given collection of books of various sizes, the optimum number of shelf heights to use can be determined by finding the shortest path in an equivalent network. Applications of this model to inventory control, assortment and packaging problems are…

Strongly nonlinear parabolic variational inequalities.

PubMed

Browder, F E; Brézis, H

1980-02-01

An existence and uniqueness result is established for a general class of variational inequalities for parabolic partial differential equations of the form partial differentialu/ partial differentialt + A(u) + g(u) = f with g nondecreasing but satisfying no growth condition. The proof is based upon a type of compactness result for solutions of variational inequalities that should find a variety of other applications.

Fast Track Initiative: Building a Global Compact for Education. Education Notes

ERIC Educational Resources Information Center

Human Development Network Education, 2005

2005-01-01

This note series is intended to summarize lessons learned and key policy findings on the World Bank's work in education. "Fast Track Initiative" ("FTI") was launched in 2002 as a partnership between donor and developing countries to accelerate progress towards the Millennium Development Goal (MDG) of universal primary education. "FTI" is built on…

Radio Observations of Sgr B2

NASA Astrophysics Data System (ADS)

Mao, Xin-Jie; Su, Jiang-Tao

2001-10-01

The 13CO (J=1-0) map of the molecular cloud Sgr B2 reveals that the mass center of the molecular cloud nucleus does not coincide with that of compact HII regions which are likely to be the outcome of a shock on the cloud. We find evidence of cloud contraction probably resulting from cloud-cloud collision at subsonic speed.

Application Research of Quality Control Technology of Asphalt Pavement based on GPS Intelligent

NASA Astrophysics Data System (ADS)

Wang, Min; Gao, Bo; Shang, Fei; Wang, Tao

2017-10-01

Due to the difficulty of steel deck pavement asphalt layer compaction caused by the effect of the flexible supporting system (orthotropic steel deck plate), it is usually hard and difficult to control for the site compactness to reach the design goal. The intelligent compaction technology is based on GPS control technology and real-time acquisition of actual compaction tracks, and then forms a cloud maps of compaction times, which guide the roller operator to do the compaction in accordance with the design requirement to ensure the deck compaction technology and compaction quality. From the actual construction situation of actual bridge and checked data, the intelligent compaction technology is significant in guaranteeing the steel deck asphalt pavement compactness and quality stability.

Modification of the D2 radial wavefunction by near resonant compact states

NASA Astrophysics Data System (ADS)

Hagelstein, Peter L.

2003-03-01

We have proposed that phonon exchange can occur in the presence of a highly excited optical phonon mode during a dd-fusion reaction. We have also suggested (P. L. Hagelstein, Bull. APS 45, 235 (2000)) at new second-order site-other-site reactions can occur when the energy of a fusion reaction is transferred elsewhere. Fast particle ejecta from the experiments of Chambers( G. P. Chambers, et al, J. Fusion Energy, Vol. 9, p. 281 (1990).) and of Cecil (F. E. Cecil, et al, AIP Conf. Proc. Vol. 228, p. 383 (1990).) appear to be consistent with such a mechanism, in which a dd-fusion reaction at one site is coupled to a disintegration at another site. The dominant process of this type is the null reaction in which dd-fusion is coupled to He-4 dissociation. This process can lead to compact dd-states(P. L. Hagelstein, Bull. APS 2001), and is consistent with the Kasagi experiment(J. Kasagi et al, J. Phys. Soc. Japan 64, 777 (1995). ). We find that compact states near resonance with the molecular D2 states changes the radial wavefunction at small r.

How the morphology of dusts influences packing density in small solar system bodies

NASA Astrophysics Data System (ADS)

Zangmeister, C.; Radney, J. G.; Zachariah, M. R.

2014-12-01

Large planetary seedlings, comets, and nanoscale soot particles are made from rigid, aggregated subunits that are compacted under low compression into larger structures spanning over 10 orders of magnitude in dimensional space. Here, we demonstrate that the packing density (Φf) of compacted rigid aggregates is independent of spatial scale for systems under weak compaction, a regime that includes small solar system bodies. The Φf of rigid aggregated structures across 6 orders of magnitude were measured using nanoscale spherical soot aerosol composed of aggregates with ≈ 17 nm monomeric subunits and aggregates made from uniform monomeric 6 mm spherical subunits at the macroscale. We find Φf = 0.36 ± 0.02 at both the nano- and macroscale. These values are remarkably similar to qf observed for comet nuclei and measured values of other rigid aggregated systems across a wide variety of spatial and formative conditions. We present a packing model that incorporates the aggregate morphology and show that Φf is independent of both monomer and aggregate size. These observations suggest thatqf of rigid aggregates is independent of spatial dimension across varied formative conditions ranging from interstellar space to pharmaceutical manufacturing.

Novel compaction resistant and ductile nanocomposite nanofibrous microfiltration membranes.

PubMed

Homaeigohar, Seyed Shahin; Elbahri, Mady

2012-04-15

Despite promising filtration abilities, low mechanical properties of extraordinary porous electrospun nanofibrous membranes could be a major challenge in their industrial development. In addition, such kind of membranes are usually hydrophobic and non-wettable. To reinforce an electrospun nanofibrous membrane made of polyethersulfone (PES) mechanically and chemically (to improve wettability), zirconia nanoparticles as a novel nanofiller in membrane technology were added to the nanofibers. The compressive and tensile results obtained through nanoindentation and tensile tests, respectively, implied an optimum mechanical properties after incorporation of zirconia nanoparticles. Especially compaction resistance of the electrospun nanofibrous membranes improved significantly as long as no agglomeration of the nanoparticles occurred and the electrospun nanocomposite membranes showed a higher tensile properties without any brittleness i.e. a high ductility. Noteworthy, for the first time the compaction level was quantified through a nanoindentation test. In addition to obtaining a desired mechanical performance, the hydrophobicity declined. Combination of promising properties of optimum mechanical and surface chemical properties led to a considerably high water permeability also retention efficiency of the nanocomposite PES nanofibrous membranes. Such finding implies a longer life span and lower energy consumption for a water filtration process. Copyright © 2012 Elsevier Inc. All rights reserved.

Frictional families in 2D experimental disks under periodic gravitational compaction

NASA Astrophysics Data System (ADS)

Hubard, Aline; Shattuck, Mark; O'Hern, Corey

2014-03-01

We studied a bidisperse system with diameter ratio 1.2 consisting of four 1.26cm and three 1.57cm stainless steel cylinders confined between two glass plates separated 1.05 times their thickness with the cylinder axis perpendicular to gravity. The particles initially resting on a movable piston are thrown upward and allowed to come to rest. In general this frictional state is stabilized by both normal and tangential (frictional) forces. We then apply short (10ms) small amplitude bursts of 440Hz vibration, temporarily breaking tangential forces and then allow the system to re-stabilize. After N of these compaction steps the number of contacts will increase to an isostatic friction-less state and additional steps do not change the system. Many frictional states reach the same final friction-less state. We find that this evolution is determined by the projection of the gravity vector on the null space of the dynamical matrix of a normal spring network formed from the contacts of the frictional state. Thus each frictional contact network follow a one-dimensional path (or family) through phase space under gravitational compaction. PREM-DMR0934206.

Why Do Compact Active Galactic Nuclei at High Redshift Twinkle Less?

NASA Technical Reports Server (NTRS)

Koay, J. Y.; Macquart, J.-P.; Bignall, H. E.; Reynolds, C.; Rickett, B. J.; Jauncey, D. L.; Pursimo, T.; Lovell, J. E. J.; Kedziora-Chudczer, L.; Ojha, R.

2012-01-01

The fraction of compact active galactic.nuclei (AGNs) that exhibit interstellar scintillation (ISS) at radio wavelengths, as well as their scintillation amplitudes, have been found to decrease significantly for sources at redshifts z approx greater than 2. This can be attributed to an increase in the angular sizes of the mu-as-scale cores or a decrease in the flux densities of the compact mu-as cores relative to that of the mas-scale components with increasing redshift, possibly arising from (1) the space-time curvature of an expanding Universe, (2) AGN evolution, (3) source selection biases, (4) scatter broadening in the ionized intergalactic medium (IGM), or (5) gravitational lensing. We examine the frequency scaling of this redshift dependence of ISS to determine its origin, using data from a dual-frequency survey of ISS of 128 sources at 0 approx < z approx < 4. We present a novel method of analysis which accounts for selection effects in the source sample. We determine that the redshift dependence of ISS is partially linked to the steepening of source spectral indices (alpha (sup 8.4, sub 4.9)) with redshift, caused either by selection biases or AGN evolution, coupled with weaker ISS in the alpha (sup 8.4, sub 4.9) < -0.4 sources. Selecting only the -0.4 < alpha (sup 8.4, sub 4.9) < 0.4 sources, we find that the redshift dependence of ISS is still significant, but is not significantly steeper than the expected (1 + z)(exp 0.5) scaling of source angular sizes due to cosmological expansion for a brightness temperature and flux-limited sample of sources. We find no significant evidence for scatter broadening in the IGM, ruling it out as the main cause of the redshift dependence of ISS. We obtain an upper limit to IGM scatter broadening of approx. < 110 mu-as at 4.9 GHz with 99% confidence for all lines of sight, and as low as approx. < 8 mu-as for sight-lines to the most compact, approx 10 mu-as sources.

Forming Disk Galaxies Early in the Universe

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2015-08-01

What were galaxies like in the first 500 million years of the universe? According to simulations by Yu Feng (UC Berkeley) and collaborators, the earliest massive galaxies to form were mostly disk-shaped, rather than the compact clumps previously predicted. Early-Galaxy Models. Current models for galaxy formation predict that small perturbations in the distribution of matter in the early universe collapsed to form very compact, irregular, clumpy first galaxies. Observations support this: the furthest out that we've spotted disk-shaped galaxies is at z=3, whereas the galaxies we've observed from earlier times -- up to redshifts of z=8-10 -- are very compact. But could this be a selection effect, arising from the rarity of large galaxies in the early universe? Current surveys at high redshift have thus far only covered relatively small volumes of space, so it's not necessarily surprising that we haven't yet spotted any large disk galaxies. Similarly, numerical simulations of galaxy formation are limited in the size of the volume they can evolve, so resulting models of early galaxy formation also tend to favor compact clumpy galaxies over large disks. An Enormous Simulation. Pushing at these limitations, Feng and his collaborators used the Blue Waters supercomputer to carry out an enormous cosmological hydrodynamic simulation called BlueTides. In this simulation, they track 700 billion particles as they evolve in a volume of 400 comoving Mpc/h -- 40 times the volume of the largest previous simulation and 300 times the volume of the largest observational survey at these redshifts. What they find is that by z=8, a whopping 70% of the most massive galaxies (over 7 billion solar masses each) were disk-shaped, though they are more compact, gas-rich, and turbulent than present-day disk galaxies like the Milky Way. The way the most massive galaxies formed in the simulation also wasn't expected: rather than resulting from major mergers, they were built from smooth accretion onto the disks from nearby filaments. These simulations suggest we still have a lot to learn about the structure of galaxies in the early universe and how they formed. Luckily, future telescope projects should help us out: Feng and collaborators estimate that the WFIRST satellite, for instance, should have the capability to detect 8000 disk galaxies of the type BlueTides predicts -- compared to the weak 30% chance of finding a single one in the current largest-area Hubble survey!

An architecture for efficient gravitational wave parameter estimation with multimodal linear surrogate models

NASA Astrophysics Data System (ADS)

O'Shaughnessy, Richard; Blackman, Jonathan; Field, Scott E.

2017-07-01

The recent direct observation of gravitational waves has further emphasized the desire for fast, low-cost, and accurate methods to infer the parameters of gravitational wave sources. Due to expense in waveform generation and data handling, the cost of evaluating the likelihood function limits the computational performance of these calculations. Building on recently developed surrogate models and a novel parameter estimation pipeline, we show how to quickly generate the likelihood function as an analytic, closed-form expression. Using a straightforward variant of a production-scale parameter estimation code, we demonstrate our method using surrogate models of effective-one-body and numerical relativity waveforms. Our study is the first time these models have been used for parameter estimation and one of the first ever parameter estimation calculations with multi-modal numerical relativity waveforms, which include all \\ell ≤slant 4 modes. Our grid-free method enables rapid parameter estimation for any waveform with a suitable reduced-order model. The methods described in this paper may also find use in other data analysis studies, such as vetting coincident events or the computation of the coalescing-compact-binary detection statistic.

On the Time Evolution of Gamma-Ray Burst Pulses: A Self-Consistent Description.

PubMed

Ryde; Svensson

2000-01-20

For the first time, the consequences of combining two well-established empirical relations that describe different aspects of the spectral evolution of observed gamma-ray burst (GRB) pulses are explored. These empirical relations are (1) the hardness-intensity correlation and (2) the hardness-photon fluence correlation. From these we find a self-consistent, quantitative, and compact description for the temporal evolution of pulse decay phases within a GRB light curve. In particular, we show that in the case in which the two empirical relations are both valid, the instantaneous photon flux (intensity) must behave as 1&solm0;&parl0;1+t&solm0;tau&parr0;, where tau is a time constant that can be expressed in terms of the parameters of the two empirical relations. The time evolution is fully defined by two initial constants and two parameters. We study a complete sample of 83 bright GRB pulses observed by the Compton Gamma-Ray Observatory and identify a major subgroup of GRB pulses ( approximately 45%) which satisfy the spectral-temporal behavior described above. In particular, the decay phase follows a reciprocal law in time. It is unclear what physics causes such a decay phase.

'Papillary' solitary fibrous tumor/hemangiopericytoma with nuclear STAT6 expression and NAB2-STAT6 fusion.

PubMed

Ishizawa, Keisuke; Tsukamoto, Yoshitane; Ikeda, Shunsuke; Suzuki, Tomonari; Homma, Taku; Mishima, Kazuhiko; Nishikawa, Ryo; Sasaki, Atsushi

2016-04-01

This report describes clinicopathological findings, including genetic data of STAT6, in a solitary fibrous tumor (SFT)/hemangiopericytoma (HPC) of the central nervous system in an 83-year-old woman with a bulge in the left forehead. She noticed it about 5 months before, and it had grown rapidly for the past 1 month. Neuroradiological studies disclosed a well-demarcated tumor that accompanied the destruction of the skull. The excised tumor showed a prominent papillary structure, where atypical cells were compactly arranged along the fibrovascular core ('pseudopapillary'). There was rich vasculature, some of which resembled 'staghorn' vessels. Mitotic figures were occasionally found. Whorls, psammoma bodies, or intra-nuclear pseudoinclusions were not identified. By immunohistochemistry, CD34 was strongly positive in the tumor cells, and STAT6 was localized in their nuclei. By reverse transcription-polymerase chain reaction (RT-PCR), an NAB2-STAT6 fusion gene, NAB2 exon6-STAT6 exon17, was detected, establishing a definite diagnosis of SFT/HPC. 'Papillary' SFT/HPC needs to be recognized as a possible morphological variant of SFT/HPC, and should be borne in mind in its diagnostic practice.

Coseismic Excitation of the Earth's Polar Motion

NASA Technical Reports Server (NTRS)

Chao, B. F.; Gross, R. S.

2000-01-01

Apart from the "shaking" near the epicenter that is the earthquake, a seismic event creates a permanent field of dislocation in the entire Earth. This redistribution of mass changes (slightly) the Earth's inertia tensor; and the Earth's rotation will change in accordance with the conservation of angular momentum. Similar to this seismic excitation of Earth rotation variations, the same mass redistribution causes (slight) changes in the Earth's gravitational field expressible in terms of changes in the Stokes coefficients of its harmonic expansion. In this paper, we give a historical background of the subject and discuss the related physics; we then compute the geodynamic effects caused by earthquakes based on normal-mode summation scheme. The effects are computed using the centroid moment tensor (CMT) solutions for 15,814 major earthquakes from Jan., 1977, through Feb., 1999, as provided in the Harvard CMT catalog. The computational results further strengthens these findings and conclusions: (i) the strong tendency for earthquakes to make the Earth rounder and more compact (however slightly) continues; (ii) so does the trend in the seismic "nudging" of the rotation pole toward the general direction of approx. 140 E, roughly opposite to that of the observed polar drift, but two orders of magnitude smaller in drift speed.

Effect of the magnetic field on the nonlinear optical rectification and second and third harmonic generation in double δ-doped GaAs quantum wells

NASA Astrophysics Data System (ADS)

Martínez-Orozco, J. C.; Rojas-Briseño, J. G.; Rodríguez-Magdaleno, K. A.; Rodríguez-Vargas, I.; Mora-Ramos, M. E.; Restrepo, R. L.; Ungan, F.; Kasapoglu, E.; Duque, C. A.

2017-11-01

In this paper we are reporting the computation for the Nonlinear Optical Rectification (NOR) and the Second and Third Harmonic Generation (SHG and THG) related with electronic states of asymmetric double Si-δ-doped quantum well in a GaAs matrix when this is subjected to an in-plane (x-oriented) constant magnetic field effect. The work is performed in the effective mass and parabolic band approximations in order to compute the electronic structure for the system by a diagonalization procedure. The expressions for the nonlinear optical susceptibilities, χ0(2), χ2ω(2), and χ3ω(3), are those arising from the compact matrix density formulation and stand for the NOR, SHG, and THG, respectively. This asymmetric double δ-doped quantum well potential profile actually exhibits nonzero NOR, SHG, and THG responses which can be easily controlled by the in-plane (x-direction) externally applied magnetic field. In particular we find that for the chosen configuration the harmonic generation is in the far-infrared/THz region, thus and becoming suitable building blocks for photodetectors in this range of the electromagnetic spectra.

Embryo as an active granular fluid: stress-coordinated cellular constriction chains

NASA Astrophysics Data System (ADS)

Gao, Guo-Jie Jason; Holcomb, Michael C.; Thomas, Jeffrey H.; Blawzdziewicz, Jerzy

2016-10-01

Mechanical stress plays an intricate role in gene expression in individual cells and sculpting of developing tissues. However, systematic methods of studying how mechanical stress and feedback help to harmonize cellular activities within a tissue have yet to be developed. Motivated by our observation of the cellular constriction chains (CCCs) during the initial phase of ventral furrow formation in the Drosophila melanogaster embryo, we propose an active granular fluid (AGF) model that provides valuable insights into cellular coordination in the apical constriction process. In our model, cells are treated as circular particles connected by a predefined force network, and they undergo a random constriction process in which the particle constriction probability P is a function of the stress exerted on the particle by its neighbors. We find that when P favors tensile stress, constricted particles tend to form chain-like structures. In contrast, constricted particles tend to form compact clusters when P favors compression. A remarkable similarity of constricted-particle chains and CCCs observed in vivo provides indirect evidence that tensile-stress feedback coordinates the apical constriction activity. Our particle-based AGF model will be useful in analyzing mechanical feedback effects in a wide variety of morphogenesis and organogenesis phenomena.

Temporal and spatial variation in porosity and compaction pressure for the viscoelastic slab

NASA Astrophysics Data System (ADS)

Morishige, M.; Van Keken, P. E.

2017-12-01

Fluid is considered to play key roles in subduction zones. It triggers various types of earthquakes by elevating pore-fluid pressure or forming hydrous minerals, and it also facilitates magma genesis by lowering the solidus temperatures of mantle and crustal rocks. Several previous numerical studies have worked on how fluid migrates and how porosity changes in time and space, but our knowledge of the fluid behavior remains limited. In this presentation, we demonstrate the detailed fluid behavior in the slab. The main features of this study are that (1) viscoelasticity is included, and that (2) fluid flow toward the inner part of the slab is also considered. We construct 2D and 3D finite element models for viscoelastic slab based on a theory of two-phase flow, which allows us to treat the movement of rock- and fluid- phases simultaneously. We solve the equations for porosity and compaction pressure which is defined as the pressure difference in between the two phases. Fluid source is fixed in time and space, and a uniform slab velocity is imposed for the whole model domain. There are several important parameters affecting the fluid behavior which includes bulk viscosity, bulk modulus, permeability, and fluid viscosity. Among these we fix bulk modulus and change the other parameters to investigate their effects on fluid migration. We find that when bulk viscosity is relatively high, elasticity is dominant and large amount of fluid is trapped in and around the fluid source. In addition, fluid migrates along the fluid source when relatively high ratio of permeability to fluid viscosity is assumed. Fluid generally moves with the slab when the ratio of permeability to fluid viscosity is low. One interesting feature is that in some cases porosity increases also in the deeper part of the fluid source due to the diffusion of compaction pressure. It suggests that the effects of resistance to volume change can be an alternative mechanism to effectively hydrate the inner part in the slab. In 3D, we find that fluid migrates in the maximum-dip direction of the slab. It leads to a fluid focusing where the slab bends away from the trench and it results in the increase in porosity and compaction pressure there. This finding may be useful to explain the observed along-arc variation in short-term slow slip events and the upper plane of double seismic zone.

COMPACT E+A GALAXIES AS A PROGENITOR OF MASSIVE COMPACT QUIESCENT GALAXIES AT 0.2 < z < 0.8

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zahid, H. Jabran; Hochmuth, Nicholas Baeza; Geller, Margaret J.

We search the Sloan Digital Sky Survey and the Baryon Oscillation Sky Survey to identify ∼5500 massive compact quiescent galaxy candidates at 0.2 < z < 0.8. We robustly classify a subsample of 438 E+A galaxies based on their spectral properties and make this catalog publicly available. We examine sizes, stellar population ages, and kinematics of galaxies in the sample and show that the physical properties of compact E+A galaxies suggest that they are a progenitor of massive compact quiescent galaxies. Thus, two classes of objects—compact E+A and compact quiescent galaxies—may be linked by a common formation scenario. The typicalmore » stellar population age of compact E+A galaxies is <1 Gyr. The existence of compact E+A galaxies with young stellar populations at 0.2 < z < 0.8 means that some compact quiescent galaxies first appear at intermediate redshifts. We derive a lower limit for the number density of compact E+A galaxies. Assuming passive evolution, we convert this number density into an appearance rate of new compact quiescent galaxies at 0.2 < z < 0.8. The lower limit number density of compact quiescent galaxies that may appear at z < 0.8 is comparable to the lower limit of the total number density of compact quiescent galaxies at these intermediate redshifts. Thus, a substantial fraction of the z < 0.8 massive compact quiescent galaxy population may descend from compact E+A galaxies at intermediate redshifts.« less

Subaru And Gemini Observations Of SS 433: New Constraint On The Mass Of The Compact Object

NASA Astrophysics Data System (ADS)

Kubota, K.; Ueda, Y.; Fabrika, S.; Medvedev, A.; Barsukova, E. A.; Sholukhova, O.; Goranskij, V. P.

2010-02-01

We present results of optical spectroscopic observations of the mass donor star in SS 433 with Subaru and Gemini, with an aim to best constrain the mass of the compact object. Subaru/Faint Object Camera and Spectrograph observations were performed on four nights of 2007 October 6-8 and 10, covering the orbital phase of phi = 0.96 - 0.26. We first calculate the cross-correlation function (CCF) of these spectra with that of the reference star HD 9233 in the wavelength range of 4740-4840 Å. This region is selected to avoid "strong" absorption lines accompanied with contaminating emission components, which most probably originate from the surroundings of the donor star, such as the wind and gas stream. The same analysis is applied to archive data of Gemini/GMOS taken at phi = 0.84 - 0.30 by Hillwig & Gies. From the Subaru and Gemini CCF results, the amplitude of the radial velocity curve of the donor star is determined to be 58.3 ± 3.8 km s-1 with a systemic velocity of 59.2 ± 2.5 km s-1. Together with the radial velocity curve of the compact object, we derive the mass of the donor star and compact object to be M O = 12.4 ± 1.9 M sun and M X = 4.3 ± 0.6 M sun, respectively. We conclude, however, that these values should be taken as upper limits. From the analysis of the averaged absorption line profiles of strong lines (mostly ions) and weak lines (mostly neutrals) observed with Subaru, we find evidence for heating effects from the compact object. Using a simple model, we find that the true radial velocity amplitude of the donor star could be as low as 40 ± 5 km s-1 in order to produce the observed absorption-line profiles. Taking into account the heating of the donor star may lower the derived masses to M O = 10.4+2.3 -1.9 M sun and M X = 2.5+0.7 -0.6 M sun. Our final constraint, 1.9 M sun <=M X<= 4.9 M sun, indicates that the compact object in SS 433 is most likely a low mass black hole, although the possibility of a massive neutron star cannot be firmly excluded. Based on data collected at Subaru Telescope, which is operated by the National Astronomical Observatory of Japan. Based on observations obtained at the Gemini Observatory, which is operated by the Association of Universities for Research in Astronomy, Inc., under a cooperative agreement with the NSF on behalf of the Gemini partnership: the National Science Foundation (USA), the Science and Technology Facilities Council (UK), the National Research Council (Canada), CONICYT (Chile), the Australian Research Council (Australia), Ministério da Ciência e Tecnologia (Brazil), and SECYT (Argentina).

Thyroid Hormone Receptor β Suppression of RUNX2 is Mediated by Brahma Related Gene 1 Dependent Chromatin Remodeling.

PubMed

Gillis, Noelle E; Taber, Thomas H; Bolf, Eric L; Beaudet, Caitlin M; Tomczak, Jennifer A; White, Jeffrey H; Stein, Janet L; Stein, Gary S; Lian, Jane B; Frietze, Seth; Carr, Frances E

2018-05-09

Thyroid hormone receptor beta (TRβ) suppresses tumor growth through regulation of gene expression, yet the associated TRβ-mediated changes in chromatin assembly are not known. The chromatin ATPase Brahma Related Gene 1 (BRG1, SMARCA4), a key component of chromatin remodeling complexes, is altered in many cancers, but its role in thyroid tumorigenesis and TRβ-mediated gene expression is unknown. We previously identified the oncogene runt-related transcription factor 2 (RUNX2) as a repressive target of TRβ. Here we report differential expression of BRG1 in non-malignant and malignant thyroid cells concordant with TRβ. BRG1 and TRβ have similar nuclear distribution patterns and significant co-localization. BRG1 interacts with TRβ and together are part of the regulatory complex at the RUNX2 promoter. Loss of BRG1 increases RUNX2 levels whereas re-introduction of TRβ and BRG1 synergistically decrease RUNX2 expression. RUNX2 promoter accessibility corresponded to RUNX2 expression levels. Inhibition of BRG1 activity ncreased accessibility of the RUNX2 promoter and corresponding expression. Our results reveal a novel mechanism of TRβ repression of oncogenic gene expression: TRβ recruitment of BRG1 to induce chromatin compaction and diminished RUNX2 expression. Therefore, BRG1-mediated chromatin remodeling may be obligatory for TRβ transcriptional repression and tumor suppressor function in thyroid tumorigenesis.

A Modified Consumer Inkjet for Spatiotemporal Control of Gene Expression

PubMed Central

Cohen, Daniel J.; Morfino, Roberto C.; Maharbiz, Michel M.

2009-01-01

This paper presents a low-cost inkjet dosing system capable of continuous, two-dimensional spatiotemporal regulation of gene expression via delivery of diffusible regulators to a custom-mounted gel culture of E. coli. A consumer-grade, inkjet printer was adapted for chemical printing; E. coli cultures were grown on 750 µm thick agar embedded in micro-wells machined into commercial compact discs. Spatio-temporal regulation of the lac operon was demonstrated via the printing of patterns of lactose and glucose directly into the cultures; X-Gal blue patterns were used for visual feedback. We demonstrate how the bistable nature of the lac operon's feedback, when perturbed by patterning lactose (inducer) and glucose (inhibitor), can lead to coordination of cell expression patterns across a field in ways that mimic motifs seen in developmental biology. Examples of this include sharp boundaries and the generation of traveling waves of mRNA expression. To our knowledge, this is the first demonstration of reaction-diffusion effects in the well-studied lac operon. A finite element reaction-diffusion model of the lac operon is also presented which predicts pattern formation with good fidelity. PMID:19763256

Paracoccidioidomycosis: cells expressing IL17 and Foxp3 in cutaneous and mucosal lesions.

PubMed

Pagliari, Carla; Fernandes, Elaine Raniero; Stegun, Felipe Weisshaupt; da Silva, Wellington Luiz F; Seixas Duarte, Maria Irma; Sotto, Mirian N

2011-05-01

We demonstrated and quantified by immunohistochemistry the population of cells expressing IL17 and Foxp3 in cutaneous and mucosal paracoccidioidomycosis lesions, associating these populations of cells with different presentations of granulomatous response. For this purpose, 61 skin biopsies and 55 oral mucosal biopsies were evaluated. Cells expressing IL17 were distributed in the inflammatory infiltrate in both groups of lesions and were found in the vessels' wall too. Foxp3+ expression was limited to the nuclei of lymphocytes in the inflammatory infiltrate. The distribution of IL17 was similar among the groups; however, Foxp3+ cells were increased in mucosal lesions that displayed compact granulomas. The results suggest that IL17 seems to play a role in paracoccidioidomycosis cutaneous and mucosal lesions, probably as secondary cells in the clearance of the fungal antigens. The presence of Foxp3+ cells both in skin and mucosa corroborates some previous researches that suggest the role of this group of cells in the modulation of local immune response. Copyright © 2011 Elsevier Ltd. All rights reserved.

Performance Assessment of Kernel Density Clustering for Gene Expression Profile Data

PubMed Central

Zeng, Beiyan; Chen, Yiping P.; Smith, Oscar H.

2003-01-01

Kernel density smoothing techniques have been used in classification or supervised learning of gene expression profile (GEP) data, but their applications to clustering or unsupervised learning of those data have not been explored and assessed. Here we report a kernel density clustering method for analysing GEP data and compare its performance with the three most widely-used clustering methods: hierarchical clustering, K-means clustering, and multivariate mixture model-based clustering. Using several methods to measure agreement, between-cluster isolation, and withincluster coherence, such as the Adjusted Rand Index, the Pseudo F test, the r2 test, and the profile plot, we have assessed the effectiveness of kernel density clustering for recovering clusters, and its robustness against noise on clustering both simulated and real GEP data. Our results show that the kernel density clustering method has excellent performance in recovering clusters from simulated data and in grouping large real expression profile data sets into compact and well-isolated clusters, and that it is the most robust clustering method for analysing noisy expression profile data compared to the other three methods assessed. PMID:18629292

Spatially offset AGN candidates in the CLASS survey

NASA Astrophysics Data System (ADS)

Skipper, Chris J.; Browne, Ian W. A.

2018-04-01

Prompted by a recent claim by Barrows et al. that X-ray active galactic nuclei (AGNs) are often found significantly offset from the centres of their host galaxies, we have looked for examples of compact radio sources that are offset from the optical centroids of nearby (z < 0.2) galaxies. We have selected a sample of 345 galaxies from the Sloan Digital Sky Survey (SDSS) galaxy catalogue, which have nearby compact radio sources listed in the Cosmic-Lens All Sky Survey (CLASS) catalogue. We find only three matches (˜0.87 per cent of the sample) with offsets greater than 600 milliarcsec (mas), which is considerably fewer than we would have expected from the Barrows et al. X-ray survey. We fit our histogram of offsets with a Rayleigh distribution with σ = 60.5 mas, but find that there is an excess of objects with separations greater than ˜150 mas. Assuming that this excess represents AGNs with real offsets, we place an upper limit of ˜17 per cent on the fraction of offset AGNs in our radio-selected sample. We select 38 objects with offsets greater than 150 mas, and find they have some diverse properties: Some are well known, such as Mrk 273 and Arp 220, some have dust lanes, which may have affected the optical astrometry, and a few are strong new candidates for offset AGNs.

Exploring X-Ray Binary Populations in Compact Group Galaxies With Chandra

NASA Technical Reports Server (NTRS)

Tzanavaris, P.; Hornschemeier, A. E..; Gallagher, S. C.; Lenkic, L.; Desjardins, T. D.; Walker, L. M.; Johnson, K. E.; Mulchaey, J. S.

2016-01-01

We obtain total galaxy X-ray luminosities, LX, originating from individually detected point sources in a sample of 47 galaxies in 15 compact groups of galaxies (CGs). For the great majority of our galaxies, we find that the detected point sources most likely are local to their associated galaxy, and are thus extragalactic X-ray binaries (XRBs) or nuclear active galactic nuclei (AGNs). For spiral and irregular galaxies, we find that, after accounting for AGNs and nuclear sources, most CG galaxies are either within the +/-1s scatter of the Mineo et al. LX-star formation rate (SFR) correlation or have higher LX than predicted by this correlation for their SFR. We discuss how these "excesses" may be due to low metallicities and high interaction levels. For elliptical and S0 galaxies, after accounting for AGNs and nuclear sources, most CG galaxies are consistent with the Boroson et al. LX-stellar mass correlation for low-mass XRBs, with larger scatter, likely due to residual effects such as AGN activity or hot gas. Assuming non-nuclear sources are low- or high-mass XRBs, we use appropriate XRB luminosity functions to estimate the probability that stochastic effects can lead to such extreme LX values. We find that, although stochastic effects do not in general appear to be important, for some galaxies there is a significant probability that high LX values can be observed due to strong XRB variability.

Combination of ciclopirox olamine and sphingosine-1-phosphate as granulation enhancer in diabetic wounds.

PubMed

Lim, Natalie Sheng Jie; Sham, Adeline; Chee, Stella Min Ling; Chan, Casey; Raghunath, Michael

2016-09-01

Granulation tissue formation requires a robust angiogenic response. As granulation tissue develops, collagen fibers are deposited and compacted. Forces generated in the wake of this process drive wound contraction to reduce the wound area. In diabetics, both angiogenesis and wound contraction are diminished leading to impaired wound healing. To emulate this pathology and to address it pharmacologically, we developed a wound healing model in the diabetic Zucker fatty rat and tested a topical proangiogenic strategy combining antifungal agent ciclopirox olamine (CPX) and lysophospholipid sphingosine-1-phosphate (S1P) to promote diabetic wound closure. In vitro, we demonstrated that CPX + S1P up-regulates a crucial driver of angiogenesis, hypoxia-inducible factor-1, in endothelial cells. Injection of CPX + S1P into subcutaneously implanted sponges in experimental rats showed, in an additive manner, a fivefold increased endothelial infiltration and lectin-perfused vessel length. We developed a splinted diabetic rodent model to achieve low wound contraction rates that are characteristic for the healing mode of diabetic ulcers in humans. We discovered specific dorsal sites that allowed for incremental full-thickness excisional wound depths from 1 mm (superficial) to 3 mm (deep). This enabled us to bring down wound contraction from 51% in superficial wounds to 8% in deep wounds. While the effects of topical gel treatment of CPX + S1P were masked by the rodent-characteristic dominant contraction in superficial wounds, they became clearly evident in deep diabetic wounds. Here, a fivefold increase of functional large vessels resulted in accelerated granulation tissue formulation, accompanied by a 40% increase of compacted thick collagen fibers. This was associated with substantially reduced matrix metalloproteinase-3 and -13 expression. These findings translated into a fivefold increase in granulation-driven contraction, promoting diabetic wound closure. With CPX and S1P analogues already in clinical use, their combination presents itself as an attractive proangiogenic treatment to be repurposed for diabetic wound healing. © 2016 by the Wound Healing Society.

The enamel protein amelotin is a promoter of hydroxyapatite mineralization.

PubMed

Abbarin, Nastaran; San Miguel, Symone; Holcroft, James; Iwasaki, Kengo; Ganss, Bernhard

2015-05-01

Amelotin (AMTN) is a recently discovered protein that is specifically expressed during the maturation stage of dental enamel formation. It is localized at the interface between the enamel surface and the apical surface of ameloblasts. AMTN knock-out mice have hypomineralized enamel, whereas transgenic mice overexpressing AMTN have a compact but disorganized enamel hydroxyapatite (HA) microstructure, indicating a possible involvement of AMTN in regulating HA mineralization directly. In this study, we demonstrated that recombinant human (rh) AMTN dissolved in a metastable buffer system, based on light scattering measurements, promotes HA precipitation. The mineral precipitates were characterized by scanning and transmission electron microscopy and electron diffraction. Colloidal gold immunolabeling of AMTN in the mineral deposits showed that protein molecules were associated with HA crystals. The binding affinity of rh-AMTN to HA was found to be comparable to that of amelogenin, the major protein of the forming enamel matrix. Overexpression of AMTN in mouse calvaria cells also increased the formation of calcium deposits in the culture medium. Overexpression of AMTN during the secretory stage of enamel formation in vivo resulted in rapid and uncontrolled enamel mineralization. Site-specific mutagenesis of the potential serine phosphorylation motif SSEEL reduced the in vitro mineral precipitation to less than 25%, revealing that this motif is important for the HA mineralizing function of the protein. A synthetic short peptide containing the SSEEL motif was only able to facilitate mineralization in its phosphorylated form ((P)S(P) SEEL), indicating that this motif is necessary but not sufficient for the mineralizing properties of AMTN. These findings demonstrate that AMTN has a direct influence on biomineralization by promoting HA mineralization and suggest a critical role for AMTN in the formation of the compact aprismatic enamel surface layer during the maturation stage of amelogenesis. © 2014 American Society for Bone and Mineral Research.

Simple way to calculate a UV-finite one-loop quantum energy in the Randall-Sundrum model

NASA Astrophysics Data System (ADS)

Altshuler, Boris L.

2017-04-01

The surprising simplicity of Barvinsky-Nesterov or equivalently Gelfand-Yaglom methods of calculation of quantum determinants permits us to obtain compact expressions for a UV-finite difference of one-loop quantum energies for two arbitrary values of the parameter of the double-trace asymptotic boundary conditions. This result generalizes the Gubser and Mitra calculation for the particular case of difference of "regular" and "irregular" one-loop energies in the one-brane Randall-Sundrum model. The approach developed in the paper also allows us to get "in one line" the one-loop quantum energies in the two-brane Randall-Sundrum model. The relationship between "one-loop" expressions corresponding to the mixed Robin and to double-trace asymptotic boundary conditions is traced.

Numerical simulation of intelligent compaction technology for construction quality control.

DOT National Transportation Integrated Search

2014-12-01

Intelligent compaction (IC) technique is a fast-developing technology for compaction quality control and acceptance. Proof rolling using the intelligent compaction rollers after completing compaction can eectively identify : the weak spots and sig...

Local Swift-BAT active galactic nuclei prefer circumnuclear star formation

NASA Astrophysics Data System (ADS)

Lutz, D.; Shimizu, T.; Davies, R. I.; Herrera-Camus, R.; Sturm, E.; Tacconi, L. J.; Veilleux, S.

2018-01-01

We use Herschel data to analyze the size of the far-infrared 70 μm emission for z < 0.06 local samples of 277 hosts of Swift-BAT selected active galactic nuclei (AGN), and 515 comparison galaxies that are not detected by BAT. For modest far-infrared luminosities 8.5 10.5 (star formation rates ≳6 M⊙ yr-1), possibly because these are typically reached in more compact regions. Full Table A.1 is only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/609/A9

The JCMT Plane Survey: first complete data release - emission maps and compact source catalogue

NASA Astrophysics Data System (ADS)

Eden, D. J.; Moore, T. J. T.; Plume, R.; Urquhart, J. S.; Thompson, M. A.; Parsons, H.; Dempsey, J. T.; Rigby, A. J.; Morgan, L. K.; Thomas, H. S.; Berry, D.; Buckle, J.; Brunt, C. M.; Butner, H. M.; Carretero, D.; Chrysostomou, A.; Currie, M. J.; deVilliers, H. M.; Fich, M.; Gibb, A. G.; Hoare, M. G.; Jenness, T.; Manser, G.; Mottram, J. C.; Natario, C.; Olguin, F.; Peretto, N.; Pestalozzi, M.; Polychroni, D.; Redman, R. O.; Salji, C.; Summers, L. J.; Tahani, K.; Traficante, A.; diFrancesco, J.; Evans, A.; Fuller, G. A.; Johnstone, D.; Joncas, G.; Longmore, S. N.; Martin, P. G.; Richer, J. S.; Weferling, B.; White, G. J.; Zhu, M.

2017-08-01

We present the first data release of the James Clerk Maxwell Telescope Plane Survey (JPS), the JPS Public Release 1. JPS is an 850-μm continuum survey of six fields in the northern inner Galactic plane in a longitude range of ℓ = 7°-63°, made with the Submillimetre Common-User Bolometer Array 2. This first data release consists of emission maps of the six JPS regions with an average pixel-to-pixel noise of 7.19 mJy beam-1, when smoothed over the beam, and a compact source catalogue containing 7813 sources. The 95 per cent completeness limits of the catalogue are estimated at 0.04 Jy beam-1 and 0.3 Jy for the peak and integrated flux densities, respectively. The emission contained in the compact source catalogue is 42 ± 5 per cent of the total and, apart from the large-scale (greater than 8 arcmin) emission, there is excellent correspondence with features in the 500-μm Herschel maps. We find that, with two-dimensional matching, 98 ± 2 per cent of sources within the fields centred at ℓ = 20°, 30°, 40° and 50° are associated with molecular clouds, with 91 ± 3 per cent of the ℓ = 30° and 40° sources associated with dense molecular clumps. Matching the JPS catalogue to Herschel 70-μm sources, we find that 38 ± 1 per cent of sources show evidence of ongoing star formation. The JPS Public Release 1 images and catalogue will be a valuable resource for studies of star formation in the Galaxy and the role of environment and spiral arms in the star formation process.

Faint dwarf galaxies in Hickson Compact Group 90*

NASA Astrophysics Data System (ADS)

Ordenes-Briceño, Yasna; Taylor, Matthew A.; Puzia, Thomas H.; Muñoz, Roberto P.; Eigenthaler, Paul; Georgiev, Iskren Y.; Goudfrooij, Paul; Hilker, Michael; Lançon, Ariane; Mamon, Gary; Mieske, Steffen; Miller, Bryan W.; Peng, Eric W.; Sánchez-Janssen, Rubén

2016-12-01

We report the discovery of a very diverse set of five low-surface brightness (LSB) dwarf galaxy candidates in Hickson Compact Group 90 (HCG 90) detected in deep U- and I-band images obtained with Very Large Telescope/Visible Multi-Object Spectrograph. These are the first LSB dwarf galaxy candidates found in a compact group of galaxies. We measure spheroid half-light radii in the range 0.7 ≲ reff/kpc ≲ 1.5 with luminosities of -11.65 ≲ MU ≲ -9.42 and -12.79 ≲ MI ≲ -10.58 mag, corresponding to a colour range of (U - I)0 ≃ 1.1-2.2 mag and surface brightness levels of μU ≃ 28.1 mag arcsec-2 and μI ≃ 27.4 mag arcsec-2. Their colours and luminosities are consistent with a diverse set of stellar population properties. Assuming solar and 0.02 Z⊙ metallicities we obtain stellar masses in the range M*|Z⊙ ≃ 105.7 - 6.3 M⊙ and M_{*}|_{0.02 Z_{⊙} ≃ 10^{6.3-8} M_{⊙}. Three dwarfs are older than 1 Gyr, while the other two significantly bluer dwarfs are younger than ˜2 Gyr at any mass/metallicity combination. Altogether, the new LSB dwarf galaxy candidates share properties with dwarf galaxies found throughout the Local Volume and in nearby galaxy clusters such as Fornax. We find a pair of candidates with ˜2 kpc projected separation, which may represent one of the closest dwarf galaxy pairs found. We also find a nucleated dwarf candidate, with a nucleus size of reff ≃ 46-63 pc and magnitude MU, 0 = -7.42 mag and (U - I)0 = 1.51 mag, which is consistent with a nuclear stellar disc with a stellar mass in the range 104.9 - 6.5 M⊙.

Can Minor Merging Account for the Size Growth of Quiescent Galaxies? New Results from the CANDELS Survey

NASA Astrophysics Data System (ADS)

Newman, Andrew B.; Ellis, Richard S.; Bundy, Kevin; Treu, Tommaso

2012-02-01

The presence of extremely compact galaxies at z ~ 2 and their subsequent growth in physical size has been the cause of much puzzlement. We revisit the question using deep infrared Wide Field Camera 3 data to probe the rest-frame optical structure of 935 galaxies selected with 0.4 < z < 2.5 and stellar masses M * > 1010.7 M ⊙ in the UKIRT Ultra Deep Survey and GOODS-South fields of the CANDELS survey. At each redshift, the most compact sources are those with little or no star formation, and the mean size of these systems at fixed stellar mass grows by a factor of 3.5 ± 0.3 over this redshift interval. The data are sufficiently deep to identify companions to these hosts whose stellar masses are ten times smaller. By searching for these around 404 quiescent hosts within a physical annulus 10 h -1 kpc < R < 30 h -1 kpc, we estimate the minor merger rate over 0.4 < z < 2. We find that 13%-18% of quiescent hosts have likely physical companions with stellar mass ratios of 0.1 or greater. Mergers of these companions will typically increase the host mass by 6% ± 2% per merger timescale. We estimate the minimum growth rate necessary to explain the declining abundance of compact galaxies. Using a simple model motivated by recent numerical simulations, we then assess whether mergers of the faint companions with their hosts are sufficient to explain this minimal rate. We find that mergers may explain most of the size evolution observed at z <~ 1 if a relatively short merger timescale is assumed, but the rapid growth seen at higher redshift likely requires additional physical processes.

STAR-FORMING ACTIVITY IN THE H ii REGIONS ASSOCIATED WITH THE IRAS 17160–3707 COMPLEX

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nandakumar, G.; Veena, V. S.; Vig, S.

2016-11-01

We present a multiwavelength investigation of star formation activity toward the southern H ii regions associated with IRAS 17160–3707, located at a distance of 6.2 kpc with a bolometric luminosity of 8.3 × 10{sup 5} L {sub ⊙}. The ionized gas distribution and dust clumps in the parental molecular cloud are examined in detail using measurements at infrared, submillimeter and radio wavelengths. The radio continuum images at 1280 and 610 MHz obtained using the Giant Metrewave Radio Telescope reveal the presence of multiple compact sources as well as nebulous emission. At submillimeter wavelengths, we identify seven dust clumps and estimate their physical properties suchmore » as temperature: 24–30 K, mass: 300–4800 M {sub ⊙} and luminosity: 9–317 × 10{sup 2} L {sub ⊙} using modified blackbody fits to the spectral energy distributions (SEDs) between 70 and 870 μ m. We find 24 young stellar objects (YSOs) in the mid-infrared, with a few of them coincident with the compact radio sources. The SEDs of the YSOs have been fitted by the Robitaille models and the results indicate that those having radio compact sources as counterparts host massive objects in early evolutionary stages with best fit age ≤0.2 Myr. We compare the relative evolutionary stages of clumps using various signposts such as masers, ionized gas, presence of YSOs and infrared nebulosity, and find six massive star-forming clumps and one quiescent clump. Of the former, five are in a relatively advanced stage and one in an earlier stage.« less

The Pearson-Readhead Survey of Compact Extragalactic Radio Sources from Space. II. Analysis of Source Properties

NASA Astrophysics Data System (ADS)

Lister, M. L.; Tingay, S. J.; Preston, R. A.

2001-06-01

We have performed a multidimensional correlation analysis on the observed properties of a statistically complete core-selected sample of compact radio-loud active galactic nuclei based on data from the VLBI Space Observing Programme (Paper I) and previously published studies. Our sample is drawn from the well-studied Pearson-Readhead (PR) survey and is ideally suited for investigating the general effects of relativistic beaming in compact radio sources. In addition to confirming many previously known correlations, we have discovered several new trends that lend additional support to the beaming model. These trends suggest that the most highly beamed sources in core-selected samples tend to have (1) high optical polarizations; (2) large parsec- kiloparsec-scale jet misalignments; (3) prominent VLBI core components; (4) one-sided, core, or halo radio morphology on kiloparsec scales; (5) narrow emission line equivalent widths; and (6) a strong tendency for intraday variability at radio wavelengths. We have used higher resolution space and ground-based VLBI maps to confirm the bimodality of the jet misalignment distribution for the PR survey and find that the sources with aligned parsec- and kiloparsec-scale jets generally have arcsecond-scale radio emission on both sides of the core. The aligned sources also have broader emission line widths. We find evidence that the BL Lacertae objects in the PR survey are all highly beamed and have very similar properties to the high optically polarized quasars, with the exception of smaller redshifts. A cluster analysis on our data shows that after partialing out the effects of redshift, the luminosities of our sample objects in various wave bands are generally well correlated with each other but not with other source properties.

Observational Implications of a Fall-back Crust around a Quark-nova Compact Remnant: Application to AXPs and SGRs

NASA Astrophysics Data System (ADS)

Leahy, Denis A.; Ouyed, R.; Niebergal, B.

2006-12-01

Mass is ejected from a quark stars formed by the Quark-Nova process (Ouyed, Dey and Dey, 2002 A&A, 390, L39; Keranen, Ouyed and Jaikumar 2005 ApJ, 681, 485). Some fraction of this ejecta is below escape velocity and falls back toward the compact object. If the magnetic field of the compact object is high enough, the fall-back material forms a shell of iron-rich material which then evolves quasi-statically. We explore the formation and evolution of such a fall-back crust (so-called because the material originates in the crust of the neutron star progenitor to the quark-nova). We find the resulting properites have application to the observed properties of Soft Gamma-ray Repeaters (SGRs) and Anomolous X-ray Pulsars (AXPs). These observed features of SGRs and AXPs are: (i) the two types of bursts (giant and regular); (ii) the spin-up and spin-down episodes during and following the bursts with associated persistant increases in period derivative ; (iii) the energetics of the boxing day burst, SGR1806+20; (iv) the presence of an Iron line as observed in SGR1900+14; (v) the correlation between the far-Infrared and the X-ray fluxes during the bursting episode and the quiescent phase; (vi) the hard X-ray component observed in SGRs during the giant bursts, and (vii) the discrepancy between the ages of SGRs/AXPs and their supernova remnants. We also find a natural evolutionary relationship between SGRs and AXPs in our model which predicts that only the youngest SGRs/AXPs are most likely to exhibit strong bursting. We acknowledge funding for this research from the Natural Science and Engineering Research Council of Canada.

A Modeling Investigation of Human Exposure to Select Traffic-Related Air Pollutants in the Tampa Area: Spatiotemporal Distributions of Concentrations, Social Distributions of Exposures, and Impacts of Urban Design on Both

NASA Astrophysics Data System (ADS)

Yu, Haofei

Increasing vehicle dependence in the United States has resulted in substantial emissions of traffic-related air pollutants that contribute to the deterioration of urban air quality. Exposure to urban air pollutants trigger a number of public health concerns, including the potential of inequality of exposures and health effects among population subgroups. To better understand the impact of traffic-related pollutants on air quality, exposure, and exposure inequality, modeling methods that can appropriately characterize the spatiotemporally resolved concentration distributions of traffic-related pollutants need to be improved. These modeling methods can then be used to investigate the impacts of urban design and transportation management choices on air quality, pollution exposures, and related inequality. This work will address these needs with three objectives: 1) to improve modeling methods for investigating interactions between city and transportation design choices and air pollution exposures, 2) to characterize current exposures and the social distribution of exposures to traffic-related air pollutants for the case study area of Hillsborough County, Florida, and 3) to determine expected impacts of urban design and transportation management choices on air quality, air pollution exposures, and exposure inequality. To achieve these objectives, the impacts of a small-scale transportation management project, specifically the '95 Express' high occupancy toll lane project, on pollutant emissions and nearby air quality was investigated. Next, a modeling method capable of characterizing spatiotemporally resolved pollutant emissions, concentrations, and exposures was developed and applied to estimate the impact of traffic-related pollutants on exposure and exposure inequalities among several population subgroups in Hillsborough County, Florida. Finally, using these results as baseline, the impacts of sprawl and compact urban forms, as well as vehicle fleet electrification, on air quality, pollution exposure, and exposure inequality were explored. Major findings include slightly higher pollutant emissions, with the exception of hydrocarbons, due to the managed lane project. Results also show that ambient concentration contributions from on-road mobile sources are disproportionate to their emissions. Additionally, processes not captured by the CALPUFF model, such as atmospheric formation, contribute substantially to ambient concentration levels of the secondary pollutants such as acetaldehyde and formaldehyde. Exposure inequalities for NOx, 1,3-butadiene, and benzene air pollution were found for black, Hispanic, and low income (annual household income less than $20,000) subgroups at both short-term and long-term temporal scales, which is consistent with previous findings. Exposure disparities among the subgroups are complex, and sometimes reversed for acetaldehyde and formaldehyde, due primarily to their distinct concentration distributions. Compact urban form was found to result in lower average NOx and benzene concentrations, but higher exposure for all pollutants except for NOx when compared to sprawl urban form. Evidence suggests that exposure inequalities differ between sprawl and compact urban forms, and also differ by pollutants, but are generally consistent at both short and long-term temporal scales. In addition, vehicle fleet electrification was found to result in generally lower average pollutant concentrations and exposures, except for NOx. However, the elimination of on-road mobile source emissions does not substantially reduce exposure inequality. Results and findings from this work can be applied to assist transportation infrastructure and urban planning. In addition, method developed here can be applied elsewhere for better characterization of air pollution concentrations, exposure and related inequalities.

Control of microparticles packing density in a microfluidic channel for bead based immunoassays applications

NASA Astrophysics Data System (ADS)

Caballero-Robledo, Gabriel; Guevara-Pantoja, Pablo

2014-11-01

Bead based immunoassays in microfluidic devices have shown to greatly outperform conventional methods. But if functional point-of-care devices are to be developed, precise and reproducible control over the granulate packings inside microchannels is needed. In this work we study the efficiency of a nanoparticles magnetic trap previously developed by B. Teste et al. [Lab Chip 11, 4207 (2011)] when we vary the compaction of micrometric iron beads packed against a restriction inside a microfluidic channel. The packing density of the beads is finely and reproducibly changed by applying a vibrational protocol originally developed for macroscopic, dry granular systems. We find, counterintuitively, that the most compact and stable packings are up to four times less efficient in trapping nano particles than the loosest packings. This work has been supported by Conacyt, Mexico, under Grant No. 180873.

Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains

PubMed Central

Ulianov, Sergey V.; Khrameeva, Ekaterina E.; Gavrilov, Alexey A.; Flyamer, Ilya M.; Kos, Pavel; Mikhaleva, Elena A.; Penin, Aleksey A.; Logacheva, Maria D.; Imakaev, Maxim V.; Chertovich, Alexander; Gelfand, Mikhail S.; Shevelyov, Yuri Y.; Razin, Sergey V.

2016-01-01

Recent advances enabled by the Hi-C technique have unraveled many principles of chromosomal folding that were subsequently linked to disease and gene regulation. In particular, Hi-C revealed that chromosomes of animals are organized into topologically associating domains (TADs), evolutionary conserved compact chromatin domains that influence gene expression. Mechanisms that underlie partitioning of the genome into TADs remain poorly understood. To explore principles of TAD folding in Drosophila melanogaster, we performed Hi-C and poly(A)+ RNA-seq in four cell lines of various origins (S2, Kc167, DmBG3-c2, and OSC). Contrary to previous studies, we find that regions between TADs (i.e., the inter-TADs and TAD boundaries) in Drosophila are only weakly enriched with the insulator protein dCTCF, while another insulator protein Su(Hw) is preferentially present within TADs. However, Drosophila inter-TADs harbor active chromatin and constitutively transcribed (housekeeping) genes. Accordingly, we find that binding of insulator proteins dCTCF and Su(Hw) predicts TAD boundaries much worse than active chromatin marks do. Interestingly, inter-TADs correspond to decompacted inter-bands of polytene chromosomes, whereas TADs mostly correspond to densely packed bands. Collectively, our results suggest that TADs are condensed chromatin domains depleted in active chromatin marks, separated by regions of active chromatin. We propose the mechanism of TAD self-assembly based on the ability of nucleosomes from inactive chromatin to aggregate, and lack of this ability in acetylated nucleosomal arrays. Finally, we test this hypothesis by polymer simulations and find that TAD partitioning may be explained by different modes of inter-nucleosomal interactions for active and inactive chromatin. PMID:26518482

Analysis of laboratory compaction methods of roller compacted concrete

NASA Astrophysics Data System (ADS)

Trtík, Tomáš; Chylík, Roman; Bílý, Petr; Fládr, Josef

2017-09-01

Roller-Compacted Concrete (RCC) is an ordinary concrete poured and compacted with machines typically used for laying of asphalt road layers. One of the problems connected with this technology is preparation of representative samples in the laboratory. The aim of this work was to analyse two methods of preparation of RCC laboratory samples with bulk density as the comparative parameter. The first method used dynamic compaction by pneumatic hammer. The second method of compaction had a static character. The specimens were loaded by precisely defined force in laboratory loading machine to create the same conditions as during static rolling (in the Czech Republic, only static rolling is commonly used). Bulk densities obtained by the two compaction methods were compared with core drills extracted from real RCC structure. The results have shown that the samples produced by pneumatic hammer tend to overestimate the bulk density of the material. For both compaction methods, immediate bearing index test was performed to verify the quality of compaction. A fundamental difference between static and dynamic compaction was identified. In static compaction, initial resistance to penetration of the mandrel was higher, after exceeding certain limit the resistance was constant. This means that the samples were well compacted just on the surface. Specimens made by pneumatic hammer actively resisted throughout the test, the whole volume was uniformly compacted.

Compaction dynamics of crunchy granular material

NASA Astrophysics Data System (ADS)

Guillard, François; Golshan, Pouya; Shen, Luming; Valdès, Julio R.; Einav, Itai

2017-06-01

Compaction of brittle porous material leads to a wide variety of densification patterns. Static compaction bands occurs naturally in rocks or bones, and have important consequences in industry for the manufacturing of powder tablets or metallic foams for example. Recently, oscillatory compaction bands have been observed in brittle porous media like snow or cereals. We will discuss the great variety of densification patterns arising during the compaction of puffed rice, including erratic compaction at low velocity, one or several travelling compaction bands at medium velocity and homogeneous compaction at larger velocity. The conditions of existence of each pattern are studied thanks to a numerical spring lattice model undergoing breakage and is mapped to the phase diagram of the patterns based on dimensionless characteristic quantities. This also allows to rationalise the evolution of the compaction behaviour during a single test. Finally, the localisation of compaction bands is linked to the strain rate sensitivity of the material.

Transient Gene Expression in Maize, Rice, and Wheat Cells Using an Airgun Apparatus 1

PubMed Central

Oard, James H.; Paige, David F.; Simmonds, John A.; Gradziel, Thomas M.

1990-01-01

An airgun apparatus has been constructed for transient gene expression studies of monocots. This device utilizes compressed air from a commercial airgun to propel macroprojectile and DNA-coated tungsten particles. The β-glucuronidase (GUS) reporter gene was used to monitor transient expression in three distinct cell types of maize (Zea mays), rice (Oryza sativa), and wheat (Triticum aestivum). The highest level of GUS activity in cultured maize cells was observed when distance between stopping plate and target cells was adjusted to 4.3 centimeters. Efficiency of transformation was estimated to be 4.4 × 10−3. In a partial vacuum of 700 millimeters Hg, velocity of macroprojectile was measured at 520 meters per second with a 6% reduction in velocity at atmospheric pressure. A polyethylene film placed in the breech before firing contributed to a 12% increase in muzzle velocity. A 700 millimeters Hg level of vacuum was necessary for maximum number of transfornants. GUS expression was also detected in wheat leaf base tissue of microdissected shoot apices. High levels of transient gene expression were also observed in hard, compact embryogenic callus of rice. These results show that the airgun apparatus is a convenient, safe, and low-cost device for rapid transient gene expression studies in cereals. Images Figure 7 Figure 8 Figure 9 PMID:16667278

Laboratory and Field Investigations of Small Crater Repair Technologies

DTIC Science & Technology

2007-09-01

caps over debris backfill or specially placed or compacted backfill, structural systems to bridge craters, foamed crater backfills, and structural ...Jeb S. Tingle, and Timothy J. McCaffrey Geotechnical and Structures Laboratory U.S. Army Engineer Research and Development Center 3909 Halls Ferry...Engineer Research and Development Center (ERDC), Geotechnical and Structures Laboratory (GSL), Vicksburg, MS. The findings and recommendations presented

Strongly nonlinear parabolic variational inequalities

PubMed Central

Browder, Felix E.; Brézis, Haim

1980-01-01

An existence and uniqueness result is established for a general class of variational inequalities for parabolic partial differential equations of the form ∂u/∂t + A(u) + g(u) = f with g nondecreasing but satisfying no growth condition. The proof is based upon a type of compactness result for solutions of variational inequalities that should find a variety of other applications. PMID:16592776

Intravital multiphoton fluorescence imaging and optical manipulation of spinal cord in mice, using a compact fiber laser system.

PubMed

Oshima, Yusuke; Horiuch, Hideki; Honkura, Naoki; Hikita, Atsuhiko; Ogata, Tadanori; Miura, Hiromasa; Imamura, Takeshi

2014-09-01

Near-infrared ultrafast lasers are widely used for multiphoton excited fluorescence microscopy in living animals. Ti:Sapphire lasers are typically used for multiphoton excitation, but their emission wavelength is restricted below 1,000 nm. The aim of this study is to evaluate the performance of a compact Ytterbium-(Yb-) fiber laser at 1,045 nm for multiphoton excited fluorescence microscopy in spinal cord injury. In this study, we employed a custom-designed microscopy system with a compact Yb-fiber laser and evaluated the performance of this system in in vivo imaging of brain cortex and spinal cord in YFP-H transgenic mice. For in vivo imaging of brain cortex, sharp images of basal dendrites, and pyramidal cells expressing EYFP were successfully captured using the Yb-fiber laser in our microscopy system. We also performed in vivo imaging of axon fibers of spinal cord in the transgenic mice. The obtained images were almost as sharp as those obtained using a conventional ultrafast laser system. In addition, laser ablation and multi-color imaging could be performed simultaneously using the Yb-fiber laser. The high-peak pulse Yb-fiber laser is potentially useful for multimodal bioimaging methods based on a multiphoton excited fluorescence microscopy system that incorporates laser ablation techniques. Our results suggest that microscopy systems of this type could be utilized in studies of neuroscience and clinical use in diagnostics and therapeutic tool for spinal cord injury in the future. © 2014 Wiley Periodicals, Inc.

Globular clusters in high-redshift dwarf galaxies: a case study from the Local Group

NASA Astrophysics Data System (ADS)

Zick, Tom O.; Weisz, Daniel R.; Boylan-Kolchin, Michael

2018-06-01

We present the reconstructed evolution of rest-frame ultraviolet (UV) luminosities of the most massive Milky Way dwarf spheroidal satellite galaxy, Fornax, and its five globular clusters (GCs) across redshift, based on analysis of the stellar fossil record and stellar population synthesis modelling. We find that (1) Fornax's (proto-)GCs can generate 10-100 times more UV flux than the field population, despite comprising <˜{5} per cent of the stellar mass at the relevant redshifts; (2) due to their respective surface brightnesses, it is more likely that faint, compact sources in the Hubble Frontier Fields (HFFs) are GCs hosted by faint galaxies, than faint galaxies themselves. This may significantly complicate the construction of a galaxy UV luminosity function at z > 3. (3) GC formation can introduce order-of-magnitude errors in abundance matching. We also find that some compact HFF objects are consistent with the reconstructed properties of Fornax's GCs at the same redshifts (e.g. surface brightness, star formation rate), suggesting we may have already detected proto-GCs in the early Universe. Finally, we discuss the prospects for improving the connections between local GCs and proto-GCs detected in the early Universe.

BPS equations and non-trivial compactifications

NASA Astrophysics Data System (ADS)

Tyukov, Alexander; Warner, Nicholas P.

2018-05-01

We consider the problem of finding exact, eleven-dimensional, BPS supergravity solutions in which the compactification involves a non-trivial Calabi-Yau manifold, Y , as opposed to simply a T 6. Since there are no explicitly-known metrics on non-trivial, compact Calabi-Yau manifolds, we use a non-compact "local model" and take the compactification manifold to be Y={M}_{GH}× {T}^2 , where ℳGH is a hyper-Kähler, Gibbons-Hawking ALE space. We focus on backgrounds with three electric charges in five dimensions and find exact families of solutions to the BPS equations that have the same four supersymmetries as the three-charge black hole. Our exact solution to the BPS system requires that the Calabi-Yau manifold be fibered over the space-time using compensators on Y . The role of the compensators is to ensure smoothness of the eleven-dimensional metric when the moduli of Y depend on the space-time. The Maxwell field Ansatz also implicitly involves the compensators through the frames of the fibration. We examine the equations of motion and discuss the brane distributions on generic internal manifolds that do not have enough symmetry to allow smearing.

The mond external field effect on the dynamics of the globular clusters: general considerations and application to NGC 2419

DOE Office of Scientific and Technical Information (OSTI.GOV)

Derakhshani, Kamran, E-mail: kderakhshani@iasbs.ac.ir

2014-03-01

In this paper, we investigate the external field effect in the context of the MOdified Newtonian Dynamics (MOND) on the surface brightness and velocity dispersion profiles of globular clusters (GCs). Using N-MODY, which is an N-body simulation code with a MOND potential solver, we show that the general effect of the external field for diffuse clusters, which obey MOND in most of their parts, is that it pushes the dynamics toward the Newtonian regime. On the other hand, for more compact clusters, which are essentially Newtonian in their inner parts, the external field is effective mainly in the outer partsmore » of compact clusters. As a case study, we then choose the remote Galactic GC NGC 2419. By varying the cluster mass, half-light radius, and mass-to-light ratio, we aim to find a model that will reproduce the observational data most effectively, using N-MODY. We find that even if we take the Galactic external field into account, a Newtonian Plummer sphere represents the observational data better than MOND to an order of magnitude in terms of the total χ{sup 2} of surface brightness and velocity dispersion.« less

The MOND External Field Effect on the Dynamics of the Globular Clusters: General Considerations and Application to NGC 2419

NASA Astrophysics Data System (ADS)

Derakhshani, Kamran

2014-03-01

In this paper, we investigate the external field effect in the context of the MOdified Newtonian Dynamics (MOND) on the surface brightness and velocity dispersion profiles of globular clusters (GCs). Using N-MODY, which is an N-body simulation code with a MOND potential solver, we show that the general effect of the external field for diffuse clusters, which obey MOND in most of their parts, is that it pushes the dynamics toward the Newtonian regime. On the other hand, for more compact clusters, which are essentially Newtonian in their inner parts, the external field is effective mainly in the outer parts of compact clusters. As a case study, we then choose the remote Galactic GC NGC 2419. By varying the cluster mass, half-light radius, and mass-to-light ratio, we aim to find a model that will reproduce the observational data most effectively, using N-MODY. We find that even if we take the Galactic external field into account, a Newtonian Plummer sphere represents the observational data better than MOND to an order of magnitude in terms of the total χ2 of surface brightness and velocity dispersion.

Compact Groups analysis using weak gravitational lensing II: CFHT Stripe 82 data

NASA Astrophysics Data System (ADS)

Chalela, Martín; Gonzalez, Elizabeth Johana; Makler, Martín; Lambas, Diego García; Pereira, Maria E. S.; O'mill, Ana; Shan, HuanYuan

2018-06-01

In this work we present a lensing study of Compact Groups (CGs) using data obtained from the high quality Canada-France-Hawaii Telescope Stripe 82 Survey. Using stacking techniques we obtain the average density contrast profile. We analyse the lensing signal dependence on the groups surface brightness and morphological content, for CGs in the redshift range z = 0.2 - 0.4. We obtain a larger lensing signal for CGs with higher surface brightness, probably due to their lower contamination by interlopers. Also, we find a strong dependence of the lensing signal on the group concentration parameter, with the most concentrated quintile showing a significant lensing signal, consistent with an isothermal sphere with σV = 336 ± 28 km/s and a NFW profile with R200 = 0.60 ± 0.05 h_{70}^{-1}Mpc. We also compare lensing results with dynamical estimates finding a good agreement with lensing determinations for CGs with higher surface brightness and higher concentration indexes. On the other hand, CGs that are more contaminated by interlopers show larger dynamical dispersions, since interlopers bias dynamical estimates to larger values, although the lensing signal is weakened.

Probing for Pulsars: An XMM Study of the Composite SNRS G327.1-1.1 and CTA1

NASA Technical Reports Server (NTRS)

Slane, Patrick; Mushotzky, Richard F. (Technical Monitor)

2003-01-01

The subject grant is for analysis of XMM data from the supernova remnant CTA1. Our investigation centered on the study of the compact source Rx 50007.0+7302 that, based on our previous observations, appears to be a neutron star powering a wind nebula in the remnant interior. This compact source has also been suggested as the counterpart of the EGRET source 2EG J0008+7307. The analysis of the data from the compact source is complete. We find that the spectrum of the source is well described by a power law with the addition of a soft thermal component that may correspond to emission from hot polar cap regions or to cooling emission from a light element atmosphere over the entire star. There is evidence of extended emission on small spatial scales which may correspond to structure in the underlying synchrotron nebula. Extrapolation of the nonthermal emission component to gamma-ray energies yields a flux that is consistent with that of 2EG J0008+7307, thus strengthening the proposition that there is a gamma-ray emitting pulsar at the center of CTA 1. Our timing studies with the EPIC pn data revealed no evidence for pulsations, however; we set an upper limit of 61% on the pulsed fraction from this source. The results from this study were presented in a poster at the recent IAU Symposium in Sydney, Australia. A paper summarizing these results, entitled "Xray Observations of the Compact Source in CTA 1" (Slane et al.) has been submitted for publication in the Astrophysical Journal.

The diversity of evolutionary pathways of compact elliptical galaxies in cosmological simulations

NASA Astrophysics Data System (ADS)

Wellons, Sarah

2017-01-01

Observations of the high-redshift universe have revealed a population of galaxies which are already very massive (~1e11 solar masses at z=2) and have typical sizes of < 2 kpc, much smaller than their counterparts in the local universe. How such dense, massive galaxies form, and why they appear to be less common at low redshift, have been questions of interest for both theorists and observers. I will discuss these questions in the context of the Illustris simulation, a hydrodynamical cosmological simulation in which tens of thousands of galaxies form, evolve, and interact with each other, situated within a cosmological context. I select a group of massive compact galaxies at z=2 in the simulation and trace them back and forth in time to discover both how they formed at high redshift, and what they evolve into at the present day. I find a variety of both progenitors (compact galaxies form in the simulation either via central starbursts generally brought on by mergers, or by racing out to the tip of the SF main sequence and forming very early) and descendants (many formerly-compact galaxies lurk at the core of a more massive galaxy today, others were consumed in mergers, and some evolve passively and undisturbed). I will also discuss the implications of these results for observational methods of connecting galaxy populations across redshifts - in particular, the assumption of a constant cumulative comoving number density - and suggest an improvement to this method which takes the complexity and variety of galaxies' evolutionary paths into account.

Understanding the compaction behaviour of low-substituted HPC: macro, micro, and nano-metric evaluations.

PubMed

ElShaer, Amr; Al-Khattawi, Ali; Mohammed, Afzal R; Warzecha, Monika; Lamprou, Dimitrios A; Hassanin, Hany

2018-06-01

The fast development in materials science has resulted in the emergence of new pharmaceutical materials with superior physical and mechanical properties. Low-substituted hydroxypropyl cellulose is an ether derivative of cellulose and is praised for its multi-functionality as a binder, disintegrant, film coating agent and as a suitable material for medical dressings. Nevertheless, very little is known about the compaction behaviour of this polymer. The aim of the current study was to evaluate the compaction and disintegration behaviour of four grades of L-HPC namely; LH32, LH21, LH11, and LHB1. The macrometric properties of the four powders were studied and the compaction behaviour was evaluated using the out-of-die method. LH11 and LH22 showed poor flow properties as the powders were dominated by fibrous particles with high aspect ratios, which reduced the powder flow. LH32 showed a weak compressibility profile and demonstrated a large elastic region, making it harder for this polymer to deform plastically. These findings are supported by AFM which revealed the high roughness of LH32 powder (100.09 ± 18.84 nm), resulting in small area of contact, but promoting mechanical interlocking. On the contrary, LH21 and LH11 powders had smooth surfaces which enabled larger contact area and higher adhesion forces of 21.01 ± 11.35 nN and 9.50 ± 5.78 nN, respectively. This promoted bond formation during compression as LH21 and LH11 powders had low strength yield.

28 CFR 907.1 - Purpose and authority.

Code of Federal Regulations, 2010 CFR

2010-07-01

....1 Judicial Administration NATIONAL CRIME PREVENTION AND PRIVACY COMPACT COUNCIL COMPACT COUNCIL... Prevention and Privacy Compact (Compact) and with rules, standards, and procedures established by the Compact Council regarding application and response procedures, record dissemination and use, response times, data...

28 CFR 907.1 - Purpose and authority.

Code of Federal Regulations, 2011 CFR

2011-07-01

....1 Judicial Administration NATIONAL CRIME PREVENTION AND PRIVACY COMPACT COUNCIL COMPACT COUNCIL... Prevention and Privacy Compact (Compact) and with rules, standards, and procedures established by the Compact Council regarding application and response procedures, record dissemination and use, response times, data...

28 CFR 907.1 - Purpose and authority.

Code of Federal Regulations, 2014 CFR

2014-07-01

....1 Judicial Administration NATIONAL CRIME PREVENTION AND PRIVACY COMPACT COUNCIL COMPACT COUNCIL... Prevention and Privacy Compact (Compact) and with rules, standards, and procedures established by the Compact Council regarding application and response procedures, record dissemination and use, response times, data...

Identification and Characterization of the Spodoptera Su(var) 3-9 Histone H3K9 trimethyltransferase and Its Effect in AcMNPV Infection

PubMed Central

Li, Binbin; Li, Sisi; Yin, Juan; Zhong, Jiang

2013-01-01

Histone H3-lysine9 (H3K9) trimethyltransferase gene Su(var) 3-9 was cloned and identified in three Spodoptera insects, Spodoptera frugiperda ( S . frugiperda ), S . exigua and S . litura . Sequence analysis showed that Spodoptera Su(var) 3-9 is highly conserved evolutionarily. Su(var) 3-9 protein was found to be localized in the nucleus in Sf9 cells, and interact with histone H3, and the heterochromatin protein 1a (HP1a) and HP1b. A dose-dependent enzymatic activity was found at both 27 °C and 37 °C in vitro, with higher activity at 27 °C. Addition of specific inhibitor chaetocin resulted in decreased histone methylation level and host chromatin relaxation. In contrast, overexpression of Su(var) 3-9 caused increased histone methylation level and cellular genome compaction. In AcMNV-infected Sf9 cells, the transcription of Su(var) 3-9 increased at late time of infection, although the mRNA levels of most cellular genes decreased. Pre-treatment of Sf9 cells with chaetocin speeded up viral DNA replication, and increased the transcription level of a variety of virus genes, whereas in Sf9 cells pre-transformed with Su(var) 3-9 expression vector, viral DNA replication slow down slightly. These findings suggest that Su(var) 3-9 might participate in the viral genes expression an genome replication repression during AcMNPV infection. It provided a new insight for the understanding virus–host interaction mechanism. PMID:23894480

Integrative genomics reveals hypoxia inducible genes that are associated with a poor prognosis in neuroblastoma patients.

PubMed

Applebaum, Mark A; Jha, Aashish R; Kao, Clara; Hernandez, Kyle M; DeWane, Gillian; Salwen, Helen R; Chlenski, Alexandre; Dobratic, Marija; Mariani, Christopher J; Godley, Lucy A; Prabhakar, Nanduri; White, Kevin; Stranger, Barbara E; Cohn, Susan L

2016-11-22

Neuroblastoma is notable for its broad spectrum of clinical behavior ranging from spontaneous regression to rapidly progressive disease. Hypoxia is well known to confer a more aggressive phenotype in neuroblastoma. We analyzed transcriptome data from diagnostic neuroblastoma tumors and hypoxic neuroblastoma cell lines to identify genes whose expression levels correlate with poor patient outcome and are involved in the hypoxia response. By integrating a diverse set of transcriptome datasets, including those from neuroblastoma patients and neuroblastoma derived cell lines, we identified nine genes (SLCO4A1, ENO1, HK2, PGK1, MTFP1, HILPDA, VKORC1, TPI1, and HIST1H1C) that are up-regulated in hypoxia and whose expression levels are correlated with poor patient outcome in three independent neuroblastoma cohorts. Analysis of 5-hydroxymethylcytosine and ENCODE data indicate that at least five of these nine genes have an increase in 5-hydroxymethylcytosine and a more open chromatin structure in hypoxia versus normoxia and are putative targets of hypoxia inducible factor (HIF) as they contain HIF binding sites in their regulatory regions. Four of these genes are key components of the glycolytic pathway and another three are directly involved in cellular metabolism. We experimentally validated our computational findings demonstrating that seven of the nine genes are significantly up-regulated in response to hypoxia in the four neuroblastoma cell lines tested. This compact and robustly validated group of genes, is associated with the hypoxia response in aggressive neuroblastoma and may represent a novel target for biomarker and therapeutic development.

The Rapid Formation of Localized Compaction Bands Under Hydrostatic Load Leading to Pore-pressure Transients in Compacting Rocks

NASA Astrophysics Data System (ADS)

Faulkner, D.; Leclere, H.; Bedford, J. D.; Behnsen, J.; Wheeler, J.

2017-12-01

Compaction of porous rocks can occur uniformly or within localized deformation bands. The formation of compaction bands and their effects on deformation behaviour are poorly understood. Porosity may be primary and compaction can occur with burial, or it can be produced by metamorphic reactions with a solid volume reduction, that can then undergo collapse. We report results from hydrostatic compaction experiments on porous bassanite (CaSO4.0.5H2O) aggregates. Gypsum (CaSO4.2H2O) is first dehydrated under low effective pressure, 4 MPa, to produce a bassanite aggregate with a porosity of 27%. Compaction is induced by increasing confining pressure at rates from 0.001 MPa/s to 0.02 MPa/s while the sample is maintained at a temperature of 115°C. At slow compaction rates, porosity collapse proceeds smoothly. At higher compaction rates, sudden increases in the pore-fluid pressure occur with a magnitude of 5 MPa. Microstructural investigations using X-ray microtomography and SEM observations show that randomly oriented localized compaction features occur in all samples, where the bulk porosity of 18% outside the band is reduced to 5% inside the band. Previous work on deformation bands has suggested that localized compactive features only form under an elevated differential stress and not under a hydrostatic stress state. The magnitude of the pore-pressure pulses can be explained by the formation of compaction bands. The results indicate that the compaction bands can form by rapid (unstable) propagation across the sample above a critical strain rate, or quasi-statically at low compaction rates without pore-fluid pressure bursts. The absence of pore-fluid pressure bursts at slow compaction rates can be explained by viscous deformation of the bassanite aggregate around the tip of a propagating compaction band, relaxing stress, and promoting stable propagation. Conversely, at higher compaction rates, viscous deformation cannot relax the stress sufficiently and unstable, brittle propagation occurs. In nature, this type of compaction behaviour might result in a mechanism to produce pulses of pore pressure within porous rocks which might have a significant effect on the deformation behaviour at depth.

A complete analytical solution for the inverse instantaneous kinematics of a spherical-revolute-spherical (7R) redundant manipulator

NASA Technical Reports Server (NTRS)

Podhorodeski, R. P.; Fenton, R. G.; Goldenberg, A. A.

1989-01-01

Using a method based upon resolving joint velocities using reciprocal screw quantities, compact analytical expressions are generated for the inverse solution of the joint rates of a seven revolute (spherical-revolute-spherical) manipulator. The method uses a sequential decomposition of screw coordinates to identify reciprocal screw quantities used in the resolution of a particular joint rate solution, and also to identify a Jacobian null-space basis used for the direct solution of optimal joint rates. The results of the screw decomposition are used to study special configurations of the manipulator, generating expressions for the inverse velocity solution for all non-singular configurations of the manipulator, and identifying singular configurations and their characteristics. Two functions are therefore served: a new general method for the solution of the inverse velocity problem is presented; and complete analytical expressions are derived for the resolution of the joint rates of a seven degree of freedom manipulator useful for telerobotic and industrial robotic application.

Fermionic currents in AdS spacetime with compact dimensions

NASA Astrophysics Data System (ADS)

Bellucci, S.; Saharian, A. A.; Vardanyan, V.

2017-09-01

We derive a closed expression for the vacuum expectation value (VEV) of the fermionic current density in a (D +1 )-dimensional locally AdS spacetime with an arbitrary number of toroidally compactified Poincaré spatial dimensions and in the presence of a constant gauge field. The latter can be formally interpreted in terms of a magnetic flux treading the compact dimensions. In the compact subspace, the field operator obeys quasiperiodicity conditions with arbitrary phases. The VEV of the charge density is zero and the current density has nonzero components along the compact dimensions only. They are periodic functions of the magnetic flux with the period equal to the flux quantum and tend to zero on the AdS boundary. Near the horizon, the effect of the background gravitational field is small and the leading term in the corresponding asymptotic expansion coincides with the VEV for a massless field in the locally Minkowski bulk. Unlike the Minkowskian case, in the system consisting of an equal number of fermionic and scalar degrees of freedom, with same masses, charges and phases in the periodicity conditions, the total current density does not vanish. In these systems, the leading divergences in the scalar and fermionic contributions on the horizon are canceled and, as a consequence of that, the charge flux, integrated over the coordinate perpendicular to the AdS boundary, becomes finite. We show that in odd spacetime dimensions the fermionic fields realizing two inequivalent representations of the Clifford algebra and having equal phases in the periodicity conditions give the same contribution to the VEV of the current density. Combining the contributions from these fields, the current density in odd-dimensional C -,P - and T -symmetric models are obtained. As an application, we consider the ground state current density in curved carbon nanotubes described in terms of a (2 +1 )-dimensional effective Dirac model.

A study of sound absorption by street canyon boundaries and asphalt rubber concrete pavement

NASA Astrophysics Data System (ADS)

Drysdale, Graeme Robert

A sound field model, based on a classical diffusion equation, is extended to account for sound absorption in a diffusion parameter used to model sound energy in a narrow street canyon. The model accounts for a single sound absorption coefficient, separate accommodation coefficients and a combination of separate absorption and accommodation coefficients from parallel canyon walls. The new expressions are compared to the original formula through numerical simulations to reveal the effect of absorption on sound diffusion. The newly established analytical formulae demonstrate satisfactory agreement with their predecessor under perfect reflection. As well, the influence of the extended diffusion parameter on normalized sound pressure levels in a narrow street canyon is in agreement with experimental data. The diffusion parameters are used to model sound energy density in a street canyon as a function of the sound absorption coefficient of the street canyon walls. The acoustic and material properties of conventional and asphalt rubber concrete (ARC) pavement are also studied to assess how the crumb rubber content influences sound absorption in street canyons. The porosity and absolute permeability of compacted specimens of asphalt rubber concrete are measured and compared to their normal and random incidence sound absorption coefficients as a function of crumb rubber content in the modified binder. Nonlinear trends are found between the sound absorption coefficients, porosity and absolute permeability of the compacted specimens and the percentage of crumb rubber in the modified binders. The cross-sectional areas of the air voids on the surfaces of the compacted specimens are measured using digital image processing techniques and a linear relationship is obtained between the average void area and crumb rubber content. The measured material properties are used to construct an empirical formula relating the average porosity, normal incidence noise reduction coefficients and percentage of crumb rubber in the modified binder of the compacted specimens.

Compact CFB: The next generation CFB boiler

DOE Office of Scientific and Technical Information (OSTI.GOV)

Utt, J.

1996-12-31

The next generation of compact circulating fluidized bed (CFB) boilers is described in outline form. The following topics are discussed: compact CFB = pyroflow + compact separator; compact CFB; compact separator is a breakthrough design; advantages of CFB; new design with substantial development history; KUHMO: successful demo unit; KUHMO: good performance over load range with low emissions; KOKKOLA: first commercial unit and emissions; KOKKOLA: first commercial unit and emissions; compact CFB installations; next generation CFB boiler; grid nozzle upgrades; cast segmented vortex finders; vortex finder installation; ceramic anchors; pre-cast vertical bullnose; refractory upgrades; and wet gunning.

Combined static-dynamic compaction of metal powder and ceramic materials

NASA Astrophysics Data System (ADS)

Mironovs, V.; Korjakins, A.; Tatarinov, A.; Barone, E.; Glushchenkov, V.

2017-10-01

Combined static-dynamic compaction of powder material presents advantages for achievement of a higher degree of powder compaction for in dry conditions. One of possible realizations is the use of pulsed electromagnetic compaction (MPC) applied in addition to the static pre-compaction carried out by a hydraulic press. Experimental MPC equipment was used for compaction powders of SiC and Al-B with W fibers at different stages of grinding. The degree of compaction was evaluated by shock plate’s displacement at different levels and regimes of dynamic loading. The paper demonstrates feasibility of the method for compaction of the selected ceramic and metal powders and presents some quantitative data for practices.

Mechanical and chemical compaction in fine-grained shallow-water limestones.

USGS Publications Warehouse

Shinn, E.A.; Robbin, D.M.

1983-01-01

Significant mechanical compaction resulted from pressures simulating less than 305 m of burial. Increasing loads to an equivalent of more than 3400 m did not significantly increase compaction or reduce sediment core length. Chemical compaction (pressure dissolution) was detected only in sediment cores compacted to pressures greater than 3400 m of burial. These short-term experiments suggest that chemical compaction would begin at much shallower depths given geologic time. Compaction experiments that caused chemical compaction lend support to the well-established hypothesis; that cement required to produce a low-porosity/low-permeability fine-grained limestone is derived internally. Dissolution, ion diffusion, and reprecipitation are considered the most likely processes for creating significant thicknesses of dense limestone in the geologic record. Continuation of chemical compaction after significant porosity reduction necessitates expulsion of connate fluids, possibly including hydrocarbons. -from Authors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schäfer, Gerhard

The current knowledge in the post-Newtonian (PN) dynamics and motion of non-spinning and spinning compact binaries will be presented based on the Arnowitt-Deser-Misner Hamiltonian approach to general relativity. The presentation will cover the binary dynamics with non-spinning components up to the 4PN order and for spinning binaries up to the next-to-next-to-leading order in the spin-orbit and spin-spin couplings. Radiation reaction will be treated for both non-spinning and spinning binaries. Explicit analytic expressions for the motion will be given, innermost stable circular orbits will be discussed.

Electroweak radiative corrections for polarized Moller scattering at the future 11 GeV JLab experiment

DOE PAGES

Aleksejevs, Aleksandrs; Barkanova, Svetlana; Ilyichev, Alexander; ...

2010-11-19

We perform updated and detailed calculations of the complete NLO set of electroweak radiative corrections to parity violating e – e – → e – e – (γ) scattering asymmetries at energies relevant for the ultra-precise Moller experiment coming soon at JLab. Our numerical results are presented for a range of experimental cuts and relative importance of various contributions is analyzed. In addition, we also provide very compact expressions analytically free from non-physical parameters and show them to be valid for fast yet accurate estimations.

Technical Desiderata for the Integration of Genomic Data into Electronic Health Records

PubMed Central

Masys, Daniel R.; Jarvik, Gail P.; Abernethy, Neil F.; Anderson, Nicholas R.; Papanicolaou, George J.; Paltoo, Dina N.; Hoffman, Mark A.; Kohane, Isaac S.; Levy, Howard P.

2012-01-01

The era of “Personalized Medicine,” guided by individual molecular variation in DNA, RNA, expressed proteins and other forms of high volume molecular data brings new requirements and challenges to the design and implementation of Electronic Health Records (EHRs). In this article we describe the characteristics of biomolecular data that differentiate it from other classes of data commonly found in EHRs, enumerate a set of technical desiderata for its management in healthcare settings, and offer a candidate technical approach to its compact and efficient representation in operational systems. PMID:22223081

Direct visualization of membrane architecture of myelinating cells in transgenic mice expressing membrane-anchored EGFP.

PubMed

Deng, Yaqi; Kim, BongWoo; He, Xuelian; Kim, Sunja; Lu, Changqing; Wang, Haibo; Cho, Ssang-Goo; Hou, Yiping; Li, Jianrong; Zhao, Xianghui; Lu, Q Richard

2014-04-01

Myelinogenesis is a complex process that involves substantial and dynamic changes in plasma membrane architecture and myelin interaction with axons. Highly ramified processes of oligodendrocytes in the central nervous system (CNS) make axonal contact and then extrapolate to wrap around axons and form multilayer compact myelin sheathes. Currently, the mechanisms governing myelin sheath assembly and axon selection by myelinating cells are not fully understood. Here, we generated a transgenic mouse line expressing the membrane-anchored green fluorescent protein (mEGFP) in myelinating cells, which allow live imaging of details of myelinogenesis and cellular behaviors in the nervous systems. mEGFP expression is driven by the promoter of 2'-3'-cyclic nucleotide 3'-phosphodiesterase (CNP) that is expressed in the myelinating cell lineage. Robust mEGFP signals appear in the membrane processes of oligodendrocytes in the CNS and Schwann cells in the peripheral nervous system (PNS), wherein mEGFP expression defines the inner layers of myelin sheaths and Schmidt-Lanterman incisures in adult sciatic nerves. In addition, mEGFP expression can be used to track the extent of remyelination after demyelinating injury in a toxin-induced demyelination animal model. Taken together, the membrane-anchored mEGFP expression in the new transgenic line would facilitate direct visualization of dynamic myelin membrane formation and assembly during development and process remodeling during remyelination after various demyelinating injuries.

Principles of control automation of soil compacting machine operating mechanism

NASA Astrophysics Data System (ADS)

Anatoly Fedorovich, Tikhonov; Drozdov, Anatoly

2018-03-01

The relevance of the qualitative compaction of soil bases in the erection of embankment and foundations in building and structure construction is given.The quality of the compactible gravel and sandy soils provides the bearing capability and, accordingly, the strength and durability of constructed buildings.It has been established that the compaction quality depends on many external actions, such as surface roughness and soil moisture; granulometry, chemical composition and degree of elasticity of originalfilled soil for compaction.The analysis of technological processes of soil bases compaction of foreign and domestic information sources showed that the solution of such important problem as a continuous monitoring of soil compaction actual degree in the process of machine operation carry out only with the use of modern means of automation. An effective vibrodynamic method of gravel and sand material sealing for the building structure foundations for various applications was justified and suggested.The method of continuous monitoring the soil compaction by measurement of the amplitudes and frequencies of harmonic oscillations on the compactible surface was determined, which allowed to determine the basic elements of facilities of soil compacting machine monitoring system of operating, etc. mechanisms: an accelerometer, a bandpass filter, a vibro-harmonics, an on-board microcontroller. Adjustable parameters have been established to improve the soil compaction degree and the soil compacting machine performance, and the adjustable parameter dependences on the overall indexhave been experimentally determined, which is the soil compaction degree.A structural scheme of automatic control of the soil compacting machine control mechanism and theoperation algorithm has been developed.

Investigating the Effect of Compaction Characteristics on the Erodibility of Cohesive Soils Using the JET Method

NASA Astrophysics Data System (ADS)

Asghari Tabrizi, A.; LaRocque, L. A.; Chaudhry, M.; Imran, J.

2013-12-01

Several flood disasters occur every year all over the world, mostly due to levee and dam failure which result in human fatalities as well as devastating economic damages. To model and predict earthen embankment failures for the preparation of emergency action plans and risk assessments, the soil erodibility by flowing water is an essential parameter. The determination of erodibility becomes even more complicated for cohesive soils because of the large number of parameters controlling their erosion behavior (e.g. clay content, plasticity, compaction effort, compaction water content) and the difficulty of estimating these parameters. In this study the effect of the compaction energy and compaction water content on the erodibility of a sandy loam soil was assessed. Soil samples were prepared in a standard diameter compaction mold, 101.6 mm, for three levels of compaction effort and water content (i.e. low, medium, and high) with two replications for each case (18 tests total) and examined using the jet erosion test (JET). Observations from qualitative and statistical analyses of the data are: 1) a wide range of erodibility, from very erodible to very resistant, was produced by changes in the compaction characteristics; 2) for a given compaction energy, the erosion resistance based on the detachment rate coefficient kd tends to become minimum near the optimum compaction water content. On the dry side of optimum compaction water content, kd decreases with steep gradients by increasing the water content, while it increases with a flatter gradient on the wet side; 3) At a given water content, the soil erosion resistance increases with compaction efforts; 4) compaction water content influences soil erosibility more than compaction energy, especially on the dry side of the optimum compaction water content; and 5) for a given compaction effort, the critical shear stress increases with water content up to an optimum water content and then it decreases which is in consistent with the kd trends.

Myelin in cartilaginous fish.

PubMed

de Bellard, Maria Elena

2016-06-15

Myelin is probably one of the most fascinating and innovative biological acquisition: a glia plasma membrane tightly wrapped around an axon and insulating it. Chondrichthyans (cartilaginous fishes) form a large group of vertebrates, and they are among oldest extant jawed vertebrate lineage. It has been known from studies 150 years ago, that they are positioned at the root of the successful appearance of compact myelin and main adhesive proteins in vertebrates. More importantly, the ultrastructure of their compact myelin is indistinguishable from the one observed in tetrapods and the first true myelin basic protein (MBP) and myelin protein zero (MPZ) seem to have originated on cartilaginous fish or their ancestors, the placoderms. Thus, the study of their myelin formation would bring new insights in vertebrate׳s myelin evolution. Chondrichthyans central nervous system (CNS) myelin composition is also very similar to peripheral nervous system (PNS) myelin composition. And while they lack true proteolipid protein (PLP) like tetrapods, they express a DM-like protein in their myelin. This article is part of a Special Issue entitled SI: Myelin Evolution. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

Ponderomotive forces in electrodynamics of moving media: The Minkowski and Abraham approaches

NASA Astrophysics Data System (ADS)

Nesterenko, V. V.; Nesterenko, A. V.

2016-09-01

In the general setting of the problem, the explicit compact formulae are derived for the ponderomotive forces in the macroscopic electrodynamics of moving media in the Minkowski and Abraham approaches. Taking account of the Minkowski constitutive relations and making use of a special representation for the Abraham energy-momentum tensor enable one to obtain a compact expression for the Abraham force in the case of arbitrary dependence of the medium velocity on spatial coordinates and the time and for nonstationary external electromagnetic field. We term the difference between the ponderomotive forces in the Abraham and Minkowski approaches as the Abraham force not only under consideration of media at rest but also in the case of moving media. The Lorentz force is found which is exerted by external electromagnetic field on the conduction current in a medium, the covariant Ohm law, and the constitutive Minkowski relations being taken into account. The physical argumentation is traced for the definition of the 4-vector of the ponderomotive force as the 4-divergence of the energy-momentum tensor of electromagnetic field in a medium.

Modeling of the multilevel conduction characteristics and fatigue profile of Ag/La1/3Ca2/3MnO3/Pt structures using a compact memristive approach

NASA Astrophysics Data System (ADS)

Miranda, E.; Román Acevedo, W.; Rubi, D.; Lüders, U.; Granell, P.; Suñé, J.; Levy, P.

2017-05-01

The hysteretic conduction characteristics and fatigue profile of La1/3Ca2/3MnO3 (LCMO)-based memristive devices were investigated. The oxide films were grown by pulsed laser deposition (PLD) and sandwiched between Ag and Pt electrodes. The devices exhibit bipolar resistive switching (RS) effect with well-defined intermediate conduction states that arise from partial SET and RESET events. The current-voltage curves are modeled and simulated using a compact memristive approach. Two equations are considered: one for the electron transport based on the double-diode equation and the other for the memory state of the device driven by the play operator with logistic ridge functions. An expression that accounts for the remnant resistance of the device is obtained after simplifying the model equations in the low-voltage limit. The role played by the power dissipation in the LCMO reset dynamics as well as the asymmetrical reduction of the resistance window caused by long trains of switching pulses are discussed.

Quantum return probability of a system of N non-interacting lattice fermions

NASA Astrophysics Data System (ADS)

Krapivsky, P. L.; Luck, J. M.; Mallick, K.

2018-02-01

We consider N non-interacting fermions performing continuous-time quantum walks on a one-dimensional lattice. The system is launched from a most compact configuration where the fermions occupy neighboring sites. We calculate exactly the quantum return probability (sometimes referred to as the Loschmidt echo) of observing the very same compact state at a later time t. Remarkably, this probability depends on the parity of the fermion number—it decays as a power of time for even N, while for odd N it exhibits periodic oscillations modulated by a decaying power law. The exponent also slightly depends on the parity of N, and is roughly twice smaller than what it would be in the continuum limit. We also consider the same problem, and obtain similar results, in the presence of an impenetrable wall at the origin constraining the particles to remain on the positive half-line. We derive closed-form expressions for the amplitudes of the power-law decay of the return probability in all cases. The key point in the derivation is the use of Mehta integrals, which are limiting cases of the Selberg integral.

SGC Tests for Influence of Material Composition on Compaction Characteristic of Asphalt Mixtures

PubMed Central

Chen, Qun

2013-01-01

Compaction characteristic of the surface layer asphalt mixture (13-type gradation mixture) was studied using Superpave gyratory compactor (SGC) simulative compaction tests. Based on analysis of densification curve of gyratory compaction, influence rules of the contents of mineral aggregates of all sizes and asphalt on compaction characteristic of asphalt mixtures were obtained. SGC Tests show that, for the mixture with a bigger content of asphalt, its density increases faster, that there is an optimal amount of fine aggregates for optimal compaction and that an appropriate amount of mineral powder will improve workability of mixtures, but overmuch mineral powder will make mixtures dry and hard. Conclusions based on SGC tests can provide basis for how to adjust material composition for improving compaction performance of asphalt mixtures, and for the designed asphalt mixture, its compaction performance can be predicted through these conclusions, which also contributes to the choice of compaction schemes. PMID:23818830

APPLICATION OF FLOW SIMULATION FOR EVALUATION OF FILLING-ABILITY OF SELF-COMPACTING CONCRETE

NASA Astrophysics Data System (ADS)

Urano, Shinji; Nemoto, Hiroshi; Sakihara, Kohei

In this paper, MPS method was applied to fluid an alysis of self-compacting concrete. MPS method is one of the particle method, and it is suitable for the simulation of moving boundary or free surface problems and large deformation problems. The constitutive equation of self-compacting concrete is assumed as bingham model. In order to investigate flow Stoppage and flow speed of self-compacting concrete, numerical analysis examples of slump flow and L-flow test were performed. In addition, to evaluate verification of compactability of self-compacting concrete, numerical analys is examples of compaction at the part of CFT diaphragm were performed. As a result, it was found that the MPS method was suitable for the simulation of compaction of self-compacting concrete, and a just appraisal was obtained by setting shear strain rate of flow-limit πc and limitation point of segregation.

SGC tests for influence of material composition on compaction characteristic of asphalt mixtures.

PubMed

Chen, Qun; Li, Yuzhi

2013-01-01

Compaction characteristic of the surface layer asphalt mixture (13-type gradation mixture) was studied using Superpave gyratory compactor (SGC) simulative compaction tests. Based on analysis of densification curve of gyratory compaction, influence rules of the contents of mineral aggregates of all sizes and asphalt on compaction characteristic of asphalt mixtures were obtained. SGC Tests show that, for the mixture with a bigger content of asphalt, its density increases faster, that there is an optimal amount of fine aggregates for optimal compaction and that an appropriate amount of mineral powder will improve workability of mixtures, but overmuch mineral powder will make mixtures dry and hard. Conclusions based on SGC tests can provide basis for how to adjust material composition for improving compaction performance of asphalt mixtures, and for the designed asphalt mixture, its compaction performance can be predicted through these conclusions, which also contributes to the choice of compaction schemes.

A Green Solvent Induced DNA Package

NASA Astrophysics Data System (ADS)

Satpathi, Sagar; Sengupta, Abhigyan; Hridya, V. M.; Gavvala, Krishna; Koninti, Raj Kumar; Roy, Bibhisan; Hazra, Partha

2015-03-01

Mechanistic details of DNA compaction is essential blue print for gene regulation in living organisms. Many in vitro studies have been implemented using several compaction agents. However, these compacting agents may have some kinds of cytotoxic effects to the cells. To minimize this aspect, several research works had been performed, but people have never focused green solvent, i.e. room temperature ionic liquid as DNA compaction agent. To the best of our knowledge, this is the first ever report where we have shown that guanidinium tris(pentafluoroethyl)trifluorophosphate (Gua-IL) acts as a DNA compacting agent. The compaction ability of Gua-IL has been verified by different spectroscopic techniques, like steady state emission, circular dichroism, dynamic light scattering and UV melting. Notably, we have extensively probed this compaction by Gua-IL through field emission scanning electron microscopy (FE-SEM) and fluorescence microscopy images. We also have discussed the plausible compaction mechanism process of DNA by Gua-IL. Our results suggest that Gua-IL forms a micellar kind of self aggregation above a certain concentration (>=1 mM), which instigates this compaction process. This study divulges the specific details of DNA compaction mechanism by a new class of compaction agent, which is highly biodegradable and eco friendly in nature.

Characterization by X-ray tomography of granulated alumina powder during in situ die compaction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cottrino, Sandrine; Jorand, Yves, E-mail: yves.jorand@insa-lyon.fr; Maire, Eric

2013-07-15

Compaction process, the aim of which being to obtain green bodies with low porosity and small size, is often used before sintering treatment. Prior to die filling, the ceramic powder is generally granulated to improve flowability. However during compaction, density heterogeneity and critical size defects may appear due to intergranule and granule-die wall frictions. In this work, the influence of granule formulation on the compact morphology has been studied. To do so, a compaction setup was installed inside an X-ray tomography equipment so that the evolution of the compact morphology could be analysed during the whole compaction process. We havemore » demonstrated that high humidity rate and the addition of binder in the granule formulation increase density heterogeneity and generate larger defects. - Highlights: • An original compaction set up was installed inside an X-Ray tomography equipment. • The compaction process of granulated ceramic powder is imaged. • The compact green microstructure is quantified and related to the compaction stages. • The most detrimental defects of dry-pressed parts are caused by hollow granules. • Formulations without binder allow a reduction of the number of large defects.« less

A search for moderate-redshift survivors from the population of luminous compact passive galaxies at high redshift

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stockton, Alan; Shih, Hsin-Yi; Larson, Kirsten

2014-01-10

From a search of a ∼2400 deg{sup 2} region covered by both the Sloan Digital Sky Survey and UKIRT Infrared Deep Sky Survey databases, we have attempted to identify galaxies at z ∼ 0.5 that are consistent with their being essentially unmodified examples of the luminous passive compact galaxies found at z ∼ 2.5. After isolating good candidates via deeper imaging, we further refine the sample with Keck moderate-resolution spectroscopy and laser guide star adaptive-optics imaging. For four of the five galaxies that so far remain after passing through this sieve, we analyze plausible star-formation histories based on our spectramore » in order to identify galaxies that may have survived with little modification from the population formed at high redshift. We find two galaxies that are consistent with having formed ≳ 95% of their mass at z > 5. We attempt to estimate masses both from our stellar population determinations and from velocity dispersions. Given the high frequency of small axial ratios, both in our small sample and among samples found at high redshifts, we tentatively suggest that some of the more extreme examples of passive compact galaxies may have prolate morphologies.« less

Performance analysis of a compact and low-cost mapping-grade mobile laser scanning system

NASA Astrophysics Data System (ADS)

Julge, Kalev; Vajakas, Toivo; Ellmann, Artu

2017-10-01

The performance of a low-cost, self-contained, compact, and easy to deploy mapping-grade mobile laser scanning (MLS) system, which is composed of a light detection and ranging sensor Velodyne VLP-16 and a dual antenna global navigation satellite system/inertial navigation system SBG Systems Ellipse-D, is analyzed. The field tests were carried out in car-mounted and backpack modes for surveying road engineering structures (such as roads, parking lots, underpasses, and tunnels) and coastal erosion zones, respectively. The impact of applied calculation principles on trajectory postprocessing, direct georeferencing, and the theoretical accuracy of the system is analyzed. A calibration method, based on Bound Optimization BY Quadratic Approximation, for finding the boresight angles of an MLS system is proposed. The resulting MLS point clouds are compared with high-accuracy static terrestrial laser scanning data and survey-grade MLS data from a commercially manufactured MLS system. The vertical, horizontal, and relative accuracy are assessed-the root-mean-square error (RMSE) values were determined to be 8, 15, and 3 cm, respectively. Thus, the achieved mapping-grade accuracy demonstrates that this relatively compact and inexpensive self-assembled MLS can be successfully used for surveying the geometry and deformations of terrain, buildings, road, and other engineering structures.

First-Principles evaluation of the Chevrel phase intercalated with Be, Mg, Ca, Sr, and Ba

NASA Astrophysics Data System (ADS)

Juran, Taylor; Smeu, Manuel

Li ion batteries are extremely useful when an item requires portability and compactness, such as laptops and cell phones; due to the lightweight/compact nature of Li ion batteries. The lightweight and compact nature of Li ion batteries comes at a high cost. It is sensible to consider Li ion battery alternatives, which are more cost effective and useable when portability is not a priority. An option for a less expensive battery source is the Ca ion battery. The Ca ion battery is interesting as many researchers overlook the potential battery source due to the perplexity of finding suitable anode materials and electrolytes. In order for this technology to work, cathodes that allow for the reversible intercalation of Ca2+ ions and also provide a preferred voltage must be identified. We investigate the Chevrel phase compounds of Mo6X8 (X = S, Se, Te) which can intercalate various ions. The concentration of the ion intercalated with the Chevrel cathode is studied. We consider doped versions of the Chevrel phase, using various dopants to substitute Mo. We use density functional theory to calculate the voltage of several intercalation ions with the Chevrel material. The resulting electronic properties of the aforementioned materials will be investigated.

Star-formation rate in compact star-forming galaxies

NASA Astrophysics Data System (ADS)

Izotova, I. Y.; Izotov, Y. I.

2018-03-01

We use the data for the Hβ emission-line, far-ultraviolet (FUV) and mid-infrared 22 μm continuum luminosities to estimate star formation rates < SFR > averaged over the galaxy lifetime for a sample of about 14000 bursting compact star-forming galaxies (CSFGs) selected from the Data Release 12 (DR12) of the Sloan Digital Sky Survey (SDSS). The average coefficient linking < SFR > and the star formation rate SFR0 derived from the Hβ luminosity at zero starburst age is found to be 0.04. We compare < SFR > s with some commonly used SFRs which are derived adopting a continuous star formation during a period of {˜} 100 Myr, and find that the latter ones are 2-3 times higher. It is shown that the relations between SFRs derived using a geometric mean of two star-formation indicators in the UV and IR ranges and reduced to zero starburst age have considerably lower dispersion compared to those with single star-formation indicators. We suggest that our relations for < SFR > determination are more appropriate for CSFGs because they take into account a proper temporal evolution of their luminosities. On the other hand, we show that commonly used SFR relations can be applied for approximate estimation within a factor of {˜} 2 of the < SFR > averaged over the lifetime of the bursting compact galaxy.

Searching for gravitational waves from compact binaries with precessing spins

NASA Astrophysics Data System (ADS)

Harry, Ian; Privitera, Stephen; Bohé, Alejandro; Buonanno, Alessandra

2016-07-01

Current searches for gravitational waves from compact-object binaries with the LIGO and Virgo observatories employ waveform models with spins aligned (or antialigned) with the orbital angular momentum. Here, we derive a new statistic to search for compact objects carrying generic (precessing) spins. Applying this statistic, we construct banks of both aligned- and generic-spin templates for binary black holes and neutron star-black hole binaries, and compare the effectualness of these banks towards simulated populations of generic-spin systems. We then use these banks in a pipeline analysis of Gaussian noise to measure the increase in background incurred by using generic- instead of aligned-spin banks. Although the generic-spin banks have roughly a factor of ten more templates than the aligned-spin banks, we find an overall improvement in signal recovery at a fixed false-alarm rate for systems with high-mass ratio and highly precessing spins. This gain in sensitivity comes at a small loss of sensitivity (≲4 %) for systems that are already well covered by aligned-spin templates. Since the observation of even a single binary merger with misaligned spins could provide unique astrophysical insights into the formation of these sources, we recommend that the method described here be developed further to mount a viable search for generic-spin binary mergers in LIGO/Virgo data.

Green Peas emit X-rays: Extreme Star Formation in Early Universe Analog Galaxies

NASA Astrophysics Data System (ADS)

Brorby, Matthew; Kaaret, Philip

2017-01-01

Luminous compact galaxies (LCGs), Lyman Alpha Emitters (LAEs), and Lyman Break Analog galaxies (LBAs) are all used as proxies for star-forming galaxies in the early Universe (z ≥ 6). The X-ray emission from such galaxies has been found to be elevated compared to other star-forming galaxies in our local Universe. It has been suggested that this may be due to the lower metallicity seen in these proxies to high-redshift galaxies and the elevated X-ray emission may affect the heating and Reionization evolution of the early Universe. Our previous studies have suggested the existence of an LX-SFR-metallicity plane for all star-forming galaxies. We present these results in the context of our newest Joint Chandra/HST study containing the first X-ray detection of the Green Pea galaxies, a population of compact starburst galaxies discovered by volunteers in the Galaxy Zoo Project (Cardamone+2009). The galaxies were given the name Green Peas due to their compact size and green appearance in the gri composite images from SDSS. The green color is caused by a strong [OIII]λ5007Å emission line, an indicator of recent star formation. We observed a few of the most promising candidates with joint Chandra/HST observation and discuss our findings here.

Formation of ultra-compact dwarf galaxies from supergiant molecular clouds

NASA Astrophysics Data System (ADS)

Goodman, Morgan; Bekki, Kenji

2018-05-01

The origin of ultra-compact dwarf galaxies (UCDs) is not yet clear. One possible formation path of UCDs is the threshing of a nucleated elliptical dwarf galaxy (dE, N), however, it remains unclear how such massive nuclear stellar systems were formed in dwarf galaxies. To better establish the early history of UCDs, we investigate the formation of UCD progenitor clusters from super giant molecular clouds (SGMCs), using hydrodynamical simulations. In this study we focus on SGMCs with masses 107 - 108 M_{\\odot } that can form massive star clusters that display physical properties similar to UCDs. We find that the clusters have extended star formation histories with two phases, producing multiple distinct stellar populations, and that the star formation rate is dependent on the feedback effects of SNe and AGB stars. The later generations of stars formed in these clusters are more compact, leading to a clearly nested structure, and these stars will be more He-rich than those of the first generation, leading to a slight colour gradient. The simulated clusters demonstrate scaling relations between Reff and M and σv and M consistent with those observed in UCDs and strongly consistent with those of the original SGMC. We discuss whether SGMCs such as these can be formed through merging of self-gravitating molecular clouds in galaxies at high-z.

Orbital stability of compact three-planets systems.

NASA Astrophysics Data System (ADS)

Gavino, Sacha; Lissauer, Jack

2018-04-01

Recent discoveries unveiled a significant number of compact multi-planetary systems, where the adjacent planets orbits are much closer to those found in the Solar System. Studying the orbital stability of such compact systems provides information on how they form and how long they survive. We performed a general study of three Earth-like planets orbiting a Sun-mass star in circular and coplanar prograde orbits. The simulations were performed over a wide range of mutual Hill radii and were conducted for virtual times reaching at most 10 billion years. Both equally-spaced and unequally spaced planet systems are investigated. We recover the results of previous studies done for systems of planets spaced uniformly in mutual Hill radius and we investigate mean motion resonances and test chaos. We also study systems with different initial spacing between the adjacent inner pair of planets and the outer pair of planets and we displayed their lifetime on a grid at different resolution. Over 45000 simulations have been done. We then characterize isochrones for lifetime of systems of equivalent spacing. We find that the stability time increases significantly for values of mutual Hill radii beyond 8. We also study the affects of mean motion resonances, the degree of symmetry in the grid and test chaos.

Compact-Nanobox Engineering of Transition Metal Oxides with Enhanced Initial Coulombic Efficiency for Lithium-Ion Battery Anodes.

PubMed

Zhu, Yanfei; Hu, Aiping; Tang, Qunli; Zhang, Shiying; Deng, Weina; Li, Yanhua; Liu, Zheng; Fan, Binbin; Xiao, Kuikui; Liu, Jilei; Chen, Xiaohua

2018-03-14

A novel strategy is proposed to construct a compact-nanobox (CNB) structure composed of irregular nanograins (average diameter ≈ 10 nm), aiming to confine the electrode-electrolyte contact area and enhance initial Coulombic efficiency (ICE) of transition metal oxide (TMO) anodes. To demonstrate the validity of this attempt, CoO-CNB is taken as an example which is synthesized via a carbothermic reduction method. Benefiting from the compact configuration, electrolyte can only contact the outer surface of the nanobox, keeping the inner CoO nanograins untouched. Therefore, the solid electrolyte interphase (SEI) formation is reduced. Furthermore, the internal cavity leaves enough room for volume variation upon lithiation and delithiation, resulting in superior mechanical stability of the CNB structure and less generation of fresh SEI. Consequently, the SEI remains stable and spatially confined without degradation, and hence, the CoO-CNB electrode delivers an enhanced ICE of 82.2%, which is among the highest values reported for TMO-based anodes in lithium-ion batteries. In addition, the CoO-CNB electrode also demonstrates excellent cyclability with a reversible capacity of 811.6 mA h g -1 (90.4% capacity retention after 100 cycles). These findings open up a new way to design high-ICE electrodes and boost the practical application of TMO anodes.

Relationships of forest vegetation to habitat on two types of glacial drift in New Hampshire

Treesearch

William B. Leak

1978-01-01

Species composition and site index were determined on nine tree habitats in an area of schistose drift and compared with previous findings on habitats with granitic drift. Habitats on schistose drift supported more sugar maple and had somewhat higher site indexes. Compact tills in schistose drift supported northern hardwoods, and the site indexes for yellow birch were...

Trio of Tryptophans Aid in Camptothecin Therapy | Center for Cancer Research

Cancer.gov

On occasion, a normally desirable feature becomes not so desirable, making it necessary to find ways to work around it. The double helical nature of DNA helps it attain a compact, supercoiled state, which is essential for lengthy strands of DNA to reside in the nucleus as part of the chromosomes. During DNA replication and gene transcription, however, cellular machinery needs

The Evolution of Luminous Compact Blue Galaxies in COSMOS between z 0.0-1.0

NASA Astrophysics Data System (ADS)

Hunt, Lucas

Luminous Compact Blue Galaxies (LCBGs) are bright, compact star forming galaxies that are common in the distant universe, but rare locally. In this thesis we have conducted studies tracing changes in the LCBG population between z = 0.0-1.0 in the COSMOS survey region. We used the luminosity function to show LCBG's contribution to the luminosity density is increasing between z = 0.0-1.0. From this we also find the number density of LCBGs is increasing by an order of magnitude from z = 0.0-1.0. Finally we show that 10% of galaxies brighter than MB = -18.5 are LCBGs at z 0.1 but 62% are LCBGs at z 0.9 indicating LCBGs are a significant population of bright star forming galaxies at high redshift. In the second study we use the COSMOS HI Large Extragalactic Survey (CHILES) and CHILES Con Pol to trace star formation rate and HI in LCBGs to higher redshift. We determine the HI mass and distribution of two LCBGs in CHILES. We find the average star formation rate of LCBGs increases between z = 0.0-1.0 from 2 solar masses per year to 53 solar masses per year. Finally, we set upper limits on the evolution of the average HI mass in LCBGs between z = 0.0-0.45, which range from (2.3-5.6)x109 solar masses. In the last study we report on the first observations of HI in gravitationally lensed galaxies behind the galaxy cluster Abell 773. We find the upper limit for the average HI mass in the lensed galaxies at z = 0.398 to be 6.58 x 10 9 solar masses and the upper limit for the HI mass of the galaxy at z = 0.487 to be 1.5 x 1010 solar masses. We use an automated flagging routine to remove RFI which reduces the noise in the spectrum by 25% when compared to spectrum in which we discarded integrations with RFI.