Cross-biome transplants of plant litter show decomposition models extend to a broader climatic range but lose predictability at the decadal time scale

Treesearch

William S. Currie; Mark E. Harmon; Ingrid C. Burke; Stephen C. Hart; William J. Parton; Whendee L. Silver

2009-01-01

We analyzed results from 10-year long field incubations of foliar and fine root litter from the Long-term lntersite Decomposition Experiment Team (LIDET) study. We tested whether a variety of climate and litter quality variables could be used to develop regression models of decomposition parameters across wide ranges in litter quality and climate and whether these...

Impacts of leaves, roots, and earthworms on soil organic matter composition and distribution in sycamore maple stands

NASA Astrophysics Data System (ADS)

Rivera, N.; Mueller, K. E.; Mueller, C. W.; Oleksyn, J.; Hale, C.; Freeman, K. H.; Eissenstat, D.

2009-12-01

The relative contributions of leaf and root material to soil organic matter (SOM) are poorly understood despite the importance of constraining SOM sources to conceptual and numeric models of SOM dynamics. Selective ingestion and bioturbation of litter and soil by earthworms can alter the fate and spatial distribution of OM in soils, including stabilization pathways of leaf and root litter. However, studies on the contributions of leaves, roots, and earthworms to SOM dynamics are rare. In 3 stands of sycamore maple (Acer pseudoplatanus) with minimal O horizon development and high earthworm activity, we sampled surface litter (> 2 mm) from the Oi horizon, fine roots (< 2 mm), bulk mineral soils (0-20 cm depth), and earthworm casts from Lumbricus terrestris middens. The chemical composition of these samples was estimated by wet-chemical degradation followed by GC-MS analysis. In addition, elemental analyses (C and N) were performed on bulk soils and earthworm casts, before and after physical fractionation by means of particle size and density. Relative to bulk soils, earthworm casts were highly enriched in organic matter, dominated by large particulate OM, and had lower acid to aldehyde ratios among lignin monomers (a proxy for extent of decomposition), confirming that L. terrestris casts stabilize recent plant litter inputs. Maple fine roots and surface litter were distinguished by different profiles of carboxylic acids estimated by GC-MS, facilitating interpretation of OM sources in bulk soil and earthworm casts. Earthworm casts were characterized by a distribution of carboxylic acids similar to that of surface litter while bulk soils had a carboxylic acid profile much closer to that of roots. These results confirm that L. terrestris is primarily a surface, leaf feeder and suggest that OM in the bulk soil may be dominated by root inputs. In bulk soils, the ratio of lignin to hydroxy- and diacids derived from suberin and cutin was low relative to plant litter, confirming the often-observed selective preservation of aliphatic over aromatic biomolecules. The ratio of lignin to cutin/suberin acids in earthworm casts was also low; based on the minimal extent of decomposition in casts evident by lignin acid to aldehyde ratios, we attribute this to selective ingestion by L. terrestris of leaf litter rich in aliphatic biomolecules at the expense of woody debris and petioles rich in lignin, rather than selective preservation.

Fine root mercury heterogeneity: metabolism of lower-order roots as an effective route for mercury removal.

PubMed

Wang, Jun-Jian; Guo, Ying-Ying; Guo, Da-Li; Yin, Sen-Lu; Kong, De-Liang; Liu, Yang-Sheng; Zeng, Hui

2012-01-17

Fine roots are critical components for plant mercury (Hg) uptake and removal, but the patterns of Hg distribution and turnover within the heterogeneous fine root components and their potential limiting factors are poorly understood. Based on root branching structure, we studied the total Hg (THg) and its cellular partitioning in fine roots in 6 Chinese subtropical trees species and the impacts of root morphological and stoichiometric traits on Hg partitioning. The THg concentration generally decreased with increasing root order, and was higher in cortex than in stele. This concentration significantly correlated with root length, diameter, specific root length, specific root area, and nitrogen concentration, whereas its cytosolic fraction (accounting for <10% of THg) correlated with root carbon and sulfur concentrations. The estimated Hg return flux from dead fine roots outweighed that from leaf litter, and ephemeral first-order roots that constituted 7.2-22.3% of total fine root biomass may have contributed most to this flux (39-71%, depending on tree species and environmental substrate). Our results highlight the high capacity of Hg stabilization and Hg return by lower-order roots and demonstrate that turnover of lower-order roots may be an effective strategy of detoxification in perennial tree species.

Genetic Based Plant Resistance and Susceptibility Traits to Herbivory Influence Needle and Root Litter Nutrient Dynamics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Classen, Aimee T; Chapman, Samantha K.; Whitham, Thomas G

2007-01-01

It is generally assumed that leaf and root litter decomposition have similar drivers and that nutrient release from these substrates is synchronized. Few studies have examined these assumptions, and none has examined how plant genetics (i.e., plant susceptibility to herbivory) could affect these relationships. Here we examine the effects of herbivore susceptibility and resistance on needle and fine root litter decomposition of pi on pine, Pinus edulis. The study population consists of individual trees that are either susceptible or resistant to herbivory by the pi on needle scale, Matsucoccus acalyptus, or the stem-boring moth, Dioryctria albovittella. Genetic analyses and experimentalmore » removals and additions of these insects have identified trees that are naturally resistant and susceptible to these insects. These herbivores increase the chemical quality of litter inputs and alter soil microclimate, both of which are important decomposition drivers. Our research leads to four major conclusions: Herbivore susceptibility and resistance effects on 1) needle litter mass loss and phosphorus (P) retention in moth susceptible and resistant litter are governed by microclimate, 2) root litter nitrogen (N) and P retention, and needle litter N retention are governed by litter chemical quality, 3) net nutrient release from litter can reverse over time, 4) root and needle litter mass loss and nutrient release are determined by location (above- vs. belowground), suggesting that the regulators of needle and root decomposition differ at the local scale. Understanding of decomposition and nutrient retention in ecosystems requires consideration of herbivore effects on above- and belowground processes and how these effects may be governed by plant genotype. Because an underlying genetic component to herbivory is common to most ecosystems of the world and herbivory may increase in climatic change scenarios, it is important to evaluate the role of plant genetics in affecting carbon and nutrient fluxes.« less

Soil Carbon Budget During Establishment of Short Rotation Woody Crops

NASA Astrophysics Data System (ADS)

Coleman, M. D.

2003-12-01

Carbon budgets were monitored following forest harvest and during re-establishment of short rotation woody crops. Soil CO2 efflux was monitored using infared gas analyzer methods, fine root production was estimated with minirhizotrons, above ground litter inputs were trapped, coarse root inputs were estimated with developed allometric relationships, and soil carbon pools were measured in loblolly pine and cottonwood plantations. Our carbon budget allows evaluation of errors, as well as quantifying pools and fluxes in developing stands during non-steady-state conditions. Soil CO2 efflux was larger than the combined inputs from aboveground litter fall and root production. Fine-root production increased during stand development; however, mortality was not yet equivalent to production, showing the belowground carbon budget was not yet in equilibrium and root carbon standing crop was accruing. Belowground production was greater in cottonwood than pine, but the level of pine soil CO2 efflux was equal to or greater than that of cottonwood, indicating heterotrophic respiration was higher for pine. Comparison of unaccounted efflux with soil organic carbon changes provides verification of loss or accrual.

Shrub encroachment in Arctic tundra: Betula nana effects on above- and belowground litter decomposition.

PubMed

McLaren, Jennie R; Buckeridge, Kate M; van de Weg, Martine J; Shaver, Gaius R; Schimel, Joshua P; Gough, Laura

2017-05-01

Rapid arctic vegetation change as a result of global warming includes an increase in the cover and biomass of deciduous shrubs. Increases in shrub abundance will result in a proportional increase of shrub litter in the litter community, potentially affecting carbon turnover rates in arctic ecosystems. We investigated the effects of leaf and root litter of a deciduous shrub, Betula nana, on decomposition, by examining species-specific decomposition patterns, as well as effects of Betula litter on the decomposition of other species. We conducted a 2-yr decomposition experiment in moist acidic tundra in northern Alaska, where we decomposed three tundra species (Vaccinium vitis-idaea, Rhododendron palustre, and Eriophorum vaginatum) alone and in combination with Betula litter. Decomposition patterns for leaf and root litter were determined using three different measures of decomposition (mass loss, respiration, extracellular enzyme activity). We report faster decomposition of Betula leaf litter compared to other species, with support for species differences coming from all three measures of decomposition. Mixing effects were less consistent among the measures, with negative mixing effects shown only for mass loss. In contrast, there were few species differences or mixing effects for root decomposition. Overall, we attribute longer-term litter mass loss patterns to patterns created by early decomposition processes in the first winter. We note numerous differences for species patterns between leaf and root decomposition, indicating that conclusions from leaf litter experiments should not be extrapolated to below-ground decomposition. The high decomposition rates of Betula leaf litter aboveground, and relatively similar decomposition rates of multiple species below, suggest a potential for increases in turnover in the fast-decomposing carbon pool of leaves and fine roots as the dominance of deciduous shrubs in the Arctic increases, but this outcome may be tempered by negative litter mixing effects during the early stages of encroachment. © 2017 by the Ecological Society of America.

Replicated throughfall exclusion experiment in an Indonesian perhumid rainforest: wood production, litter fall and fine root growth under simulated drought.

PubMed

Moser, Gerald; Schuldt, Bernhard; Hertel, Dietrich; Horna, Viviana; Coners, Heinz; Barus, Henry; Leuschner, Christoph

2014-05-01

Climate change scenarios predict increases in the frequency and duration of ENSO-related droughts for parts of South-East Asia until the end of this century exposing the remaining rainforests to increasing drought risk. A pan-tropical review of recorded drought-related tree mortalities in more than 100 monitoring plots before, during and after drought events suggested a higher drought-vulnerability of trees in South-East Asian than in Amazonian forests. Here, we present the results of a replicated (n = 3 plots) throughfall exclusion experiment in a perhumid tropical rainforest in Sulawesi, Indonesia. In this first large-scale roof experiment outside semihumid eastern Amazonia, 60% of the throughfall was displaced during the first 8 months and 80% during the subsequent 17 months, exposing the forest to severe soil desiccation for about 17 months. In the experiment's second year, wood production decreased on average by 40% with largely different responses of the tree families (ranging from -100 to +100% change). Most sensitive were trees with high radial growth rates under moist conditions. In contrast, tree height was only a secondary factor and wood specific gravity had no influence on growth sensitivity. Fine root biomass was reduced by 35% after 25 months of soil desiccation while fine root necromass increased by 250% indicating elevated fine root mortality. Cumulative aboveground litter production was not significantly reduced in this period. The trees from this Indonesian perhumid rainforest revealed similar responses of wood and litter production and root dynamics as those in two semihumid Amazonian forests subjected to experimental drought. We conclude that trees from paleo- or neotropical forests growing in semihumid or perhumid climates may not differ systematically in their growth sensitivity and vitality under sublethal drought stress. Drought vulnerability may depend more on stem cambial activity in moist periods than on tree height or wood specific gravity. © 2013 John Wiley & Sons Ltd.

Stronger influence of litter quality on decomposition rates than microbial home field advantage in novel subtropical dry forests

NASA Astrophysics Data System (ADS)

Marin-Spiotta, E.; Atkinson, E. E.

2015-12-01

Litter decomposition is one of the most studied ecosystem processes, given its role in carbon cycling and nutrient availability, yet our knowledge of how decomposition is influenced by novel species assemblages in tropical forests emerging on post-agricultural landscapes is limited. This is especially true in tropical dry forests, which are some of the most fragmented forests worldwide due to human pressures and sensitive to changes in rainfall and fire regimes. Here we tested for the effects of litter quality, site conditions, and microbial "home-field advantage" on decomposition rates in subtropical dry forests in St. Croix, U.S. Virgin Islands. We conducted a 22-month in situ and reciprocal transplant field decomposition experiment of aboveground litter and fine roots in 10-year old sites dominated by an early successional N-fixing tree and 40-year old mixed-species secondary forests. Total annual litterfall mass did not differ between the two forest types, but monthly amounts did, with more litter accumulating in the 40-year old secondary forests during the dry season and in the 10-year old secondary forests during the wet season. Litter chemistry differed between the two forest types and showed divergent patterns over the two-year field incubation. To test for the effects of litter quality on decomposition rates, we compared mass loss rates for aboveground and root litter from each forest decomposed in situ and transplanted to the other forest type. Litter in the 10-year old forests decomposed faster in situ (k= 1.07 ± 0.04) than when it was transplanted (k=0.86 ± 0.04). Litter from the 40-year old forests showed the opposite pattern. In situ root decomposition in both forests occurred at the same rate compared to roots that were transplanted there from the other forest type, suggesting that site conditions were equally important as litter quality. Our results were not consistent with a microbial home-field advantage for litter and root decomposition, that is, microbes were not more efficient at decomposing their own native litter, regardless of chemistry. Rather, decomposition patterns may be largely controlled by litter quality (and the combined effects of litter quality and site conditions specifically for roots) in contrast to the decomposer community in these subtropical dry forests.

Distinct Litter Stabilization Dynamics Pathways for Decomposition of Pine Needle and Fine Root Within Soil

NASA Astrophysics Data System (ADS)

Mambelli, S.; Filley, T. R.; Bird, J.; Dawson, T.; Torn, M. S.

2008-12-01

The chemical composition of litter imparts a strong control on the initial rates of microbial decay but it is unclear how plant chemistry influences the ultimate stabilization of soil organic matter (SOM) and the nature of the products stabilized. We determined the concentration and 13C enrichment of lignin phenols and substituted fatty acids (SFA) in SOM fractions from an experiment in which 13C- and 15N-labeled needles or fine roots were added to the mineral soil in a Ponderosa pine (Pinus ponderosa) forest in the Sierra Nevada, CA, USA. 1.5 y after litter addition, we analyzed bulk soil (< 2 mm), free light fraction (LF, mean residence time (MRT) ~5 y) and alkali/acid insoluble humin (MRT ~270 y) fractions. Needles contained nearly 2 and 3x the lignin and SFA content per organic carbon unit as did roots. Lignin and SFA decreased from the free LF to the bulk soil to the humin fraction; and molecular properties were more similar within a SOM fraction regardless of the litter source. However, LF and humin from the root addition contained more lignin than from the needle addition. Based upon the relative movement of litter-derived 13C and 15N into SOM fractions during 1.5 y, it was proposed that the 13C accumulation in the humin fraction for needles was derived from high C/N, needle-derived biopolymer molecular fragments that are surficially associated with particles. In contrast, the root-derived material entering SOM fractions was much lower in C/N and was likely from microbial by-products. Consistent with this hypothesis, both lignin and SFA in the LF and humin fractions amended with enriched needles were highly enriched (+ 30-60 permil) with respect to the SOM fractions from soils amended with roots. These differences were large even considering the lower concentration of SFA and lignin in root material. Although the chemistry and MRT of LF and humin were dramatically different, the extent of 13C-enrichment among lignin and SFA were comparable for the needle experiment while most lignin phenols for the humin from the root addition had greater 13C content than SFA. This indicates that molecular fragments of plant biopolymers can readily associate with both labile and stabilized SOM fractions. At the same time, these results suggest that distinct decomposition and stabilization pathways exist for litters, such as needles vs. roots, of different chemical quality.

Long-term dynamics of pine and hardwood litter in contrasting environments: Toward a global model of decomposition

Treesearch

Henry L. Gholz; David A. Wedin; Stephen M. Smitherman; Mark E. Harmon; William J. Parton

2000-01-01

We analysed data on mass loss after five years of decomposition in the field from both fine root and leaf litters from two highly contrasting trees, Drypetes glallca, a tropical hardwood tree from Puerto Rico, and pine species from North America as part of the Long-Term Intersite Decomposition Experiment (LIDET). LIDET is a reciprocal litterbag study...

Adaptation of fine roots to annual fertilization and irrigation in a 13-year-old Pinus pinaster stand.

PubMed

Bakker, M R; Jolicoeur, E; Trichet, P; Augusto, L; Plassard, C; Guinberteau, J; Loustau, D

2009-02-01

Effects of fertilization and irrigation on fine roots and fungal hyphae were studied in 13-year-old maritime pine (Pinus pinaster Aït. in Soland), 7 years after the initiation of the treatments. The fertilization trials consisted of a phosphorus treatment, a complete fertilizer treatment (N, P, K, Ca and Mg), and an unfertilized treatment (control). Fertilizers were applied annually and were adjusted according to foliar target values. Two irrigation regimes (no irrigation and irrigation of a set amount each day) were applied from May to October. Root samples to depths of 120 cm were collected in summer of 2005, and the biomass of small roots (diameter 2-20 mm) and fine roots (diameter

Simulated Nitrogen Deposition has Minor Effects on Ecosystem Pools and Fluxes of Energy, Elements, and Biochemicals in a Northern Hardwoods Forest

NASA Astrophysics Data System (ADS)

Talhelm, A. F.; Pregitzer, K. S.; Burton, A. J.; Xia, M.; Zak, D. R.

2017-12-01

The elemental and biochemical composition of plant tissues is an important influence on primary productivity, decomposition, and other aspects of biogeochemistry. Human activity has greatly altered biogeochemical cycles in ecosystems downwind of industrialized regions through atmospheric nitrogen deposition, but most research on these effects focuses on individual elements or steps in biogeochemical cycles. Here, we quantified pools and fluxes of biomass, the four major organic elements (carbon, oxygen, hydrogen, nitrogen), four biochemical fractions (lignin, structural carbohydrates, cell walls, and soluble material), and energy in a mature northern hardwoods forest in Michigan. We sampled the organic and mineral soil, fine and coarse roots, leaf litter, green leaves, and wood for chemical analyses. We then combined these data with previously published and archival information on pools and fluxes within this forest, which included replicated plots receiving either ambient deposition or simulated nitrogen deposition (3 g N m-2 yr-1 for 18 years). Live wood was the largest pool of energy and all elements and biochemical fractions. However, the production of wood, leaf litter, and fine roots represented similar fluxes of carbon, hydrogen, oxygen, cell wall material, and energy, while nitrogen fluxes were dominated by leaf litter and fine roots. Notably, the flux of lignin via fine roots was 70% higher than any other flux. Experimental nitrogen deposition had relatively few significant effects, increasing foliar nitrogen, increasing the concentration of lignin in the soil organic horizon and decreasing pools of all elements and biochemical fractions in the soil organic horizon except nitrogen, lignin, and structural carbohydrates. Overall, we found that differences in tissue chemistry concentrations were important determinants of ecosystem-level pools and fluxes, but that nitrogen deposition had little effect on concentrations, pools, or fluxes in this mature forest. Disclaimer: The views expressed in this poster are those of the authors and do not necessarily represent the views or policies of the U.S. EPA.

Chemistry and long-term decomposition of roots from Douglas-fir grown at elevated atmospheric CO2 and warming conditions

EPA Science Inventory

Elevated atmospheric CO2 and warming may affect litter quality of plants and its subsequent decomposition in forested ecosystems. Little data are available to test this potential feedback on root tissues. In this study, we used the fine (diameter ≤ 2 mm) and small (2-10 mm) roo...

Reactivity continuum modeling of leaf, root, and wood decomposition across biomes

NASA Astrophysics Data System (ADS)

Koehler, Birgit; Tranvik, Lars J.

2015-07-01

Large carbon dioxide amounts are released to the atmosphere during organic matter decomposition. Yet the large-scale and long-term regulation of this critical process in global carbon cycling by litter chemistry and climate remains poorly understood. We used reactivity continuum (RC) modeling to analyze the decadal data set of the "Long-term Intersite Decomposition Experiment," in which fine litter and wood decomposition was studied in eight biome types (224 time series). In 32 and 46% of all sites the litter content of the acid-unhydrolyzable residue (AUR, formerly referred to as lignin) and the AUR/nitrogen ratio, respectively, retarded initial decomposition rates. This initial rate-retarding effect generally disappeared within the first year of decomposition, and rate-stimulating effects of nutrients and a rate-retarding effect of the carbon/nitrogen ratio became more prevalent. For needles and leaves/grasses, the influence of climate on decomposition decreased over time. For fine roots, the climatic influence was initially smaller but increased toward later-stage decomposition. The climate decomposition index was the strongest climatic predictor of decomposition. The similar variability in initial decomposition rates across litter categories as across biome types suggested that future changes in decomposition may be dominated by warming-induced changes in plant community composition. In general, the RC model parameters successfully predicted independent decomposition data for the different litter-biome combinations (196 time series). We argue that parameterization of large-scale decomposition models with RC model parameters, as opposed to the currently common discrete multiexponential models, could significantly improve their mechanistic foundation and predictive accuracy across climate zones and litter categories.

Where Is Needle- and Root-Derived Soil Organic Matter After 10 Years of Decomposition in a Temperate Forest?

NASA Astrophysics Data System (ADS)

Hicks Pries, C.; Hatton, P.; Castanha, C.; Bird, J. A.; Torn, M. S.

2013-12-01

All soil organic matter (SOM) is ultimately derived from plant litter. The fate of plant litter in ecosystems determines soil carbon (C) storage and nutrient availability with far-reaching implications for ecosystems and global change. However, little is known about the process by which litter becomes SOM (as opposed to the well-studied controls on rates of C and nitrogen (N) loss from litter). We are investigating whether litter type affects where in soils litter-derived C and N eventually reside. Specifically, we are investigating whether litter type affects which minerals the C and N are associated with and how much C is in the microbial pool after a decade. We incubated 15N and 13C-labeled Pinus ponderosa needle and fine root litter in the Blodgett Experimental Forest in the Sierra Nevada foothills for 10 years. A two-way factorial design was used with needle and root litter placed into O and A soil horizons. In 2001, litter was inserted into the given horizon within soil mesocosms (10.2 cm diameter x 24 cm long PVC) that had two 5 x 5 cm mesh windows to allow contact with the surrounding soil. After 0.5, 1, 1.5, 4.5, and 10 years, the soil mesocosms were collected from the field. Isotopes were used to measure the percent recovery of the litter C and N in the bulk soil of the O and A horizons. To investigate mineral associations of the added litter C and N after 10 years, we sequentially fractionated the soils by density. The fractions were a free light fraction (<1.75 g cm-3), a fraction dominated by phyllosilicate secondary minerals (1.75-2.5 g cm-3), a quartz and feldspar-dominated fraction (2.5-2.78 g cm-3), and a fraction dominated by biotite with kaolinite and iron oxide coatings (>2.78 g cm-3). To quantify the amount of litter-derived C actively cycling in the microbial pool after 10 years and use of the C by different microbial groups, we measured the 13C in phospholipid fatty acids (PLFAs). After 10 years, more root litter C (about 40%) was retained in the soil than needle litter C (about 25%). Less than 0.15% of the remaining litter C (0.06% of originally applied) was found actively cycling in microbial PLFA's. Needle and root C did not differ in the amount remaining still in the active microbial pool. Preliminary data indicate that unlike after one year, there were no microbial groups with strong preferences for the added root or needle C relative to other microbial groups. The amount of root and needle C and N associated with the different mineral groups will also be presented.

How does litter become soil organic matter? Tracing the fate of needle- and root-derived soil organic matter through 10 years of decomposition

NASA Astrophysics Data System (ADS)

Hicks Pries, Caitlin E.; Hatton, Pierre-Joseph; Castanha, Cristina; Bird, Jeffrey A.; Torn, Margaret S.

2014-05-01

All soil organic matter (SOM) is derived from plant material. However, little is known about the process by which plant litter becomes SOM (as opposed to the better-studied controls on rates of carbon (C) and nitrogen (N) loss from litter). We investigated the transformations of above- and below-ground plant inputs in soil over ten years, and whether litter type (roots versus needles) affects the form and location of litter-derived C and N in soil after 10 years. We placed 15N and 13C-labeled Pinus ponderosa needle and fine root litter in the Blodgett Experimental Forest in the Sierra Nevada foothills in 2001. A two-way factorial design was used with needle and root litter placed into O and A soil horizons. Litter was inserted into the given horizon within soil mesocosms (10.2 cm diameter x 24 cm long PVC) that had two 5 x 5 cm mesh windows to allow contact with the surrounding soil. After 0.5, 1, 1.5, 4.5, and 10 years, the mesocosms were collected from the field. Isotopes were used to measure the percent recovery of the litter C and N in the bulk soil of the O and A horizons. To investigate mineral associations of the added litter C and N after 10 years, we sequentially fractionated the soils by density. The fractions were a free light fraction (<1.75 g cm-3), a fraction dominated by secondary phyllosilicate minerals (1.75-2.5 g cm-3), a quartz and feldspar-dominated fraction (2.5-2.78 g cm-3), and a fraction dominated by biotite with kaolinite and iron oxide coatings (>2.78 g cm-3). These fractions differ in the type of organic matter they are associated with according to C:N ratios and molecular characterization via FTIR. The biotite fraction had the lowest C:N ratios, indicating it was the most microbially-processed. After 10 years, more root litter C (about 44%) was retained in the soil than needle litter C (about 28%). In line with slower rates of decomposition, root C and N remained in the particulate (>2 mm) fraction and the free light fraction longer than needle C. However, there were similar amounts of root and needle C and N in the mineral-associated pools with 12-17% of the remaining C associated with secondary phyllosilicates and less than 1% associated with biotite. C:N ratios of the litter-derived OM were much lower in the mineral fractions than in the free light fraction. In conclusion, litter type affects how long organic matter is retained in soils by affecting the earlier stages of decomposition when microbes are utilizing substrates that are part of larger OM particles, but litter type does not appear to affect later stages of decomposition, when microbially-processed OM becomes associated with minerals.

Input-decomposition balance of heterotrophic processes in a warm-temperate mixed forest in Japan

NASA Astrophysics Data System (ADS)

Jomura, M.; Kominami, Y.; Ataka, M.; Makita, N.; Dannoura, M.; Miyama, T.; Tamai, K.; Goto, Y.; Sakurai, S.

2010-12-01

Carbon accumulation in forest ecosystem has been evaluated using three approaches. One is net ecosystem exchange (NEE) estimated by tower flux measurement. The second is net ecosystem production (NEP) estimated by biometric measurements. NEP can be expressed as the difference between net primary production and heterotrophic respiration. NEP can also be expressed as the annual increment in the plant biomass (ΔW) plus soil (ΔS) carbon pools defined as follows; NEP = ΔW+ΔS The third approach needs to evaluate annual carbon increment in soil compartment. Soil carbon accumulation rate could not be measured directly in a short term because of the small amount of annual accumulation. Soil carbon accumulation rate can be estimated by a model calculation. Rothamsted carbon model is a soil organic carbon turnover model and a useful tool to estimate the rate of soil carbon accumulation. However, the model has not sufficiently included variations in decomposition processes of organic matters in forest ecosystems. Organic matter in forest ecosystems have a different turnover rate that creates temporal variations in input-decomposition balance and also have a large variation in spatial distribution. Thus, in order to estimate the rate of soil carbon accumulation, temporal and spatial variation in input-decomposition balance of heterotrophic processes should be incorporated in the model. In this study, we estimated input-decomposition balance and the rate of soil carbon accumulation using the modified Roth-C model. We measured respiration rate of many types of organic matters, such as leaf litter, fine root litter, twigs and coarse woody debris using a chamber method. We can illustrate the relation of respiration rate to diameter of organic matters. Leaf and fine root litters have no diameter, so assumed to be zero in diameter. Organic matters in small size, such as leaf and fine root litter, have high decomposition respiration. It could be caused by the difference in structure of organic matter. Because coarse woody debris has shape of cylinder, microbes decompose from the surface of it. Thus, respiration rate of coarse woody debris is lower than that of leaf and fine root litter. Based on this result, we modified Roth-C model and estimate soil carbon accumulation rate in recent years. Based on the results from a soil survey, the forest soil stored 30tC ha-1 in O and A horizon. We can evaluate the modified model using this result. NEP can be expressed as the annual increment in the plant biomass plus soil carbon pools. So if we can estimate NEP using this approach, then we can evaluate NEP estimated by micrometeorological and ecological approaches and reduce uncertainty of NEP estimation.

Conversion of tropical lowland forest reduces nutrient return through litterfall, and alters nutrient use efficiency and seasonality of net primary production.

PubMed

Kotowska, Martyna M; Leuschner, Christoph; Triadiati, Triadiati; Hertel, Dietrich

2016-02-01

Tropical landscapes are not only rapidly transformed by ongoing land-use change, but are additionally confronted by increasing seasonal climate variation. There is an increasing demand for studies analyzing the effects and feedbacks on ecosystem functioning of large-scale conversions of tropical natural forest into intensively managed cash crop agriculture. We analyzed the seasonality of aboveground litterfall, fine root litter production, and aboveground woody biomass production (ANPP(woody)) in natural lowland forests, rubber agroforests under natural tree cover ("jungle rubber"), rubber and oil palm monocultures along a forest-to-agriculture transformation gradient in Sumatra. We hypothesized that the temporal fluctuation of litter production increases with increasing land-use intensity, while the associated nutrient fluxes and nutrient use efficiency (NUE) decrease. Indeed, the seasonal variation of aboveground litter production and ANPP(woody) increased from the natural forest to the plantations, while aboveground litterfall generally decreased. Nutrient return through aboveground litter was mostly highest in the natural forest; however, it was significantly lower only in rubber plantations. NUE of N, P and K was lowest in the oil palm plantations, with natural forest and the rubber systems showing comparably high values. Root litter production was generally lower than leaf litter production in all systems, while the root-to-leaf ratio of litter C flux increased along the land-use intensity gradient. Our results suggest that nutrient and C cycles are more directly affected by climate seasonality in species-poor agricultural systems than in species-rich forests, and therefore might be more susceptible to inter-annual climate fluctuation and climate change.

Use of an ecosystem model for testing ecosystem response to inaccuracies of root and microflora productivity estimates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Petersen, H.; O'Neill, R.V.; Gardner, R.H.

1984-01-01

A seventy-compartment model for a Danish beech forest ecosystem is described in outline. The unmodified model predicts considerable accumulation of wood litter and decreasing accumulation through secondary to final decomposition products. Increment rates are similar for all components of the detritus based food chain. Modification of fine root production rate produces strong, positive response for root litter, and less, but still significant, response for detritus, humus and the components of the decomposer food chain. Increase of microbial biomass with adjustments of metabolism and production causes reduced accumulation of detritus and humus. The soil organisms respond according to food source. Themore » use of the model for testing the sensitivity of the ecosystem to inaccuracies of rroot- and microflora estimates is discussed. 21 references, 3 figures, 1 table.« less

Treeline advances and associated shifts in the ground vegetation alter fine root dynamics and mycelia production in the South and Polar Urals.

PubMed

Solly, Emily F; Djukic, Ika; Moiseev, Pavel A; Andreyashkina, Nelly I; Devi, Nadezhda M; Göransson, Hans; Mazepa, Valeriy S; Shiyatov, Stepan G; Trubina, Marina R; Schweingruber, Fritz H; Wilmking, Martin; Hagedorn, Frank

2017-02-01

Climate warming is shifting the elevational boundary between forests and tundra upwards, but the related belowground responses are poorly understood. In the pristine South and Polar Urals with shifts of the treeline ecotone documented by historical photographs, we investigated fine root dynamics and production of extramatrical mycorrhizal mycelia (EMM) along four elevational transects reaching from the closed forest to the treeless tundra. In addition, we analysed elevational differences in climate and vegetation structure, and excavated trees to estimate related changes in the partitioning between below- and aboveground biomass. Fine root biomass of trees (<2 mm) increased by 13-79% with elevation, paralleled by a 35-72% increase in ground vegetation fine roots from the closed forest to the tundra. During the first year of decomposition, mass loss of fine root litter from different vegetation types was greater at lower elevations in the forest-tundra ecotone. The ratio between fine roots of trees and stem biomass largely increased with elevation in both regions, but these increases were not accompanied by a distinct production of EMM. Production of EMM, however, increased with the presence of ectomycorrhizal trees at the transition from the tundra to the forest. Our results imply that the recorded upward expansion of forest into former tundra in the Ural Mountains by 4-8 m per decade is decreasing the partitioning of plant biomass to fine roots. They further suggest that climate-driven forest advances will alter EMM production rates with potential feedbacks on soil carbon and nutrient cycling in these ecosystems.

Fine root dynamics and forest production across a calcium gradient in northern hardwood and conifer ecosystems

USGS Publications Warehouse

Park, B.B.; Yanai, R.D.; Fahey, T.J.; Bailey, S.W.; Siccama, T.G.; Shanley, J.B.; Cleavitt, N.L.

2008-01-01

Losses of soil base cations due to acid rain have been implicated in declines of red spruce and sugar maple in the northeastern USA. We studied fine root and aboveground biomass and production in five northern hardwood and three conifer stands differing in soil Ca status at Sleepers River, VT; Hubbard Brook, NH; and Cone Pond, NH. Neither aboveground biomass and production nor belowground biomass were related to soil Ca or Ca:Al ratios across this gradient. Hardwood stands had 37% higher aboveground biomass (P = 0.03) and 44% higher leaf litter production (P < 0.01) than the conifer stands, on average. Fine root biomass (<2 mm in diameter) in the upper 35 cm of the soil, including the forest floor, was very similar in hardwoods and conifers (5.92 and 5.93 Mg ha-1). The turnover coefficient (TC) of fine roots smaller than 1 mm ranged from 0.62 to 1.86 y-1 and increased significantly with soil exchangeable Ca (P = 0.03). As a result, calculated fine root production was clearly higher in sites with higher soil Ca (P = 0.02). Fine root production (biomass times turnover) ranged from 1.2 to 3.7 Mg ha-1 y-1 for hardwood stands and from 0.9 to 2.3 Mg ha-1 y -1 for conifer stands. The relationship we observed between soil Ca availability and root production suggests that cation depletion might lead to reduced carbon allocation to roots in these ecosystems. ?? 2008 Springer Science+Business Media, LLC.

Comparing Soil Organic Carbon Dynamics in Perennial Grasses and Shrubs in a Saline-Alkaline Arid Region, Northwestern China

PubMed Central

Su, Jiaqi; Zhang, Jingli; Zheng, Yuanrun; Ni, Jian; Xiao, Chunwang; Wang, Renzhong

2012-01-01

Background Although semi-arid and arid regions account for about 40% of terrestrial surface of the Earth and contain approximately 10% of the global soil organic carbon stock, our understanding of soil organic carbon dynamics in these regions is limited. Methodology/Principal Findings A field experiment was conducted to compare soil organic carbon dynamics between a perennial grass community dominated by Cleistogenes squarrosa and an adjacent shrub community co-dominated by Reaumuria soongorica and Haloxylon ammodendron, two typical plant life forms in arid ecosystems of saline-alkaline arid regions in northwestern China during the growing season 2010. We found that both fine root biomass and necromass in two life forms varied greatly during the growing season. Annual fine root production in the perennial grasses was 45.6% significantly higher than in the shrubs, and fine root turnover rates were 2.52 and 2.17 yr−1 for the perennial grasses and the shrubs, respectively. Floor mass was significantly higher in the perennial grasses than in the shrubs due to the decomposition rate of leaf litter in the perennial grasses was 61.8% lower than in the shrubs even though no significance was detected in litterfall production. Soil microbial biomass and activity demonstrated a strong seasonal variation with larger values in May and September and minimum values in the dry month of July. Observed higher soil organic carbon stocks in the perennial grasses (1.32 Kg C m−2) than in the shrubs (1.12 Kg C m−2) might be attributed to both greater inputs of poor quality litter that is relatively resistant to decay and the lower ability of microorganism to decompose these organic matter. Conclusions/Significance Our results suggest that the perennial grasses might accumulate more soil organic carbon with time than the shrubs because of larger amounts of inputs from litter and slower return of carbon through decomposition. PMID:22900067

Comparing soil organic carbon dynamics in perennial grasses and shrubs in a saline-alkaline arid region, northwestern China.

PubMed

Zhou, Yong; Pei, Zhiqin; Su, Jiaqi; Zhang, Jingli; Zheng, Yuanrun; Ni, Jian; Xiao, Chunwang; Wang, Renzhong

2012-01-01

Although semi-arid and arid regions account for about 40% of terrestrial surface of the Earth and contain approximately 10% of the global soil organic carbon stock, our understanding of soil organic carbon dynamics in these regions is limited. A field experiment was conducted to compare soil organic carbon dynamics between a perennial grass community dominated by Cleistogenes squarrosa and an adjacent shrub community co-dominated by Reaumuria soongorica and Haloxylon ammodendron, two typical plant life forms in arid ecosystems of saline-alkaline arid regions in northwestern China during the growing season 2010. We found that both fine root biomass and necromass in two life forms varied greatly during the growing season. Annual fine root production in the perennial grasses was 45.6% significantly higher than in the shrubs, and fine root turnover rates were 2.52 and 2.17 yr(-1) for the perennial grasses and the shrubs, respectively. Floor mass was significantly higher in the perennial grasses than in the shrubs due to the decomposition rate of leaf litter in the perennial grasses was 61.8% lower than in the shrubs even though no significance was detected in litterfall production. Soil microbial biomass and activity demonstrated a strong seasonal variation with larger values in May and September and minimum values in the dry month of July. Observed higher soil organic carbon stocks in the perennial grasses (1.32 Kg C m(-2)) than in the shrubs (1.12 Kg C m(-2)) might be attributed to both greater inputs of poor quality litter that is relatively resistant to decay and the lower ability of microorganism to decompose these organic matter. Our results suggest that the perennial grasses might accumulate more soil organic carbon with time than the shrubs because of larger amounts of inputs from litter and slower return of carbon through decomposition.

Unresolving the "real age" of fine roots in forest ecosystems

NASA Astrophysics Data System (ADS)

Solly, Emily; Brunner, Ivano; Herzog, Claude; Schöning, Ingo; Schrumpf, Marion; Schweigruber, Fritz; Trumbore, Susan; Hagedorn, Frank

2016-04-01

Estimating the turnover time of tree fine roots is crucial for modelling soil organic matter dynamics, but it is one of the biggest challenges in soil ecology and one of the least understood aspects of the belowground carbon cycle. The methods used - ranging from radiocarbon to ingrowth cores and root cameras (minirhizotrons) - yield very diverse pictures of fine root dynamics in forest ecosystems with turnover rates reaching from less than one year to decades. These have huge implications on estimates of carbon allocation to root growth and maintenance and on the persistence of root carbon in soils before it is decomposed or leached. We will present a new approach, involving techniques to study plant anatomy, which unravels the "real age" of fine roots. For a range of forests with diverse water and nutrient limitations located at different latitudes, we investigated the annual growth rings in the secondary xylem of thin transversal sections of fine roots belonging to tree species which form distinct growth rings. In temperate forests we find mean root "ring ages" of 1-2 years while in sub-arctic forests living fine roots can also persist for several years. The robustness of these results were tested by counting the maximum yearly growth rings in tree seedlings of known age and by counting the maximum number of growth rings of fine roots grown in ingrowth cores which were kept in temperate forest soils for one and two years. Radiocarbon estimates of mean "carbon ages", which define the time elapsed since structural carbon was fixed from the atmosphere, instead average around a decade in root systems of temperate forests (mixture of newly produced and older living roots). This dramatic difference may not be related to methodological bias, but to a time lag between C assimilation and production of a portion of fine root tissues due to the storage of older carbon components. The time lag depends very likely on tree species and environmental conditions. We further observed that the root ring age increases with root diameter although it does not appear to be related to the branching order. Our findings suggest that both the physiological and radiocarbon ages must be modelled jointly in forest ecosystems, if we want to correctly account for the inputs of root litter

Legume presence reduces the decomposition rate of non-legume roots, role of plant traits?

NASA Astrophysics Data System (ADS)

De Deyn, Gerlinde B.; Saar, Sirgi; Barel, Janna; Semchenko, Marina

2016-04-01

Plant litter traits are known to play an important role in the rate of litter decomposition and mineralization, both for aboveground and belowground litter. However also the biotic and abiotic environment in which the litter decomposes plays a significant role in the rate of decomposition. The presence of living plants may accelerate litter decomposition rates via a priming effects. The size of this effect is expected to be related to the traits of the litter. In this study we focus on root litter, given that roots and their link to ecosystem processes have received relatively little attention in trait-based research. To test the effect of a growing legume plant on root decomposition and the role of root traits in this we used dead roots of 7 different grassland species (comprising grasses, a forb and legumes), determined their C, N, P content and quantified litter mass loss after eight weeks of incubation in soil with and without white clover. We expected faster root decomposition with white clover, especially for root litter with low N content. In contrast we found slower decomposition of grass and forb roots which were poor in N (negative priming) in presence of white clover, while decomposition rates of legume roots were not affected by the presence of white clover. Overall we found that root decomposition can be slowed down in the presence of a living plant and that this effect depends on the traits of the decomposing roots, with a pronounced reduction in root litter poor in N and P, but not in the relatively nutrient-rich legume root litters. The negative priming effect of legume plants on non-legume litter decomposition may have resulted from preferential substrate utilisation by soil microbes.

Leaf δ15N as an indicator of arbuscular mycorrhizal nitrogen uptake in a coastal-plain forest (restinga forest) at Southeastern Brazil

NASA Astrophysics Data System (ADS)

Mardegan, S. F.; Valadares, R.; Martinelli, L.

2013-12-01

Restinga diversity contrasts with a series of adverse environmental conditions that constrain their development, including nutrient limitation. In this sense, the mutualistic symbiosis between plants and arbuscular mycorrhizal fungi (AMF) may contribute in nutrient acquisition, including nitrogen. However, this association deeply affects plant nitrogen isotopic composition (δ15N), since assimilation processes and biochemical reactions within the fungi may reflect in a delivered product with an isotopic composition about 8 to 10 ‰ lower than that observed at the fungal symbiont per se. Here we assessed if the association with AMF affects δ15N values of plant species from a coastal-plain forest (restinga forest) at Southeastern Brazil. Accordingly, we analyzed the nutritional and isotopic compositions from ecosystem key-compartments (soil, litter and leaves), relating plant δ15N with the colonization rates. The study was carried out in a permanent plot (1 ha) at a coastal-plain forest (restinga forest) at the Serra do Mar State Park, SP, Brazil. Sampled vegetation is characterized by the lack of a well-defined stratification and a rather open canopy. It also comprises trees ranging from 10 to 15-m high. Soils are deep and sandy, being characterized by high acidity, nutrient deficiency and a dense litter cover. We randomly collected five samples (250 mg) from topsoil (0-10 cm) and five to ten leaves from individuals belonging to 16 plant species of high relevance within the site (IVI index). We also collected superficial (0-10 cm depth) fine roots (5 g) and 13 samples (100 g) of fine litter next to the individuals sampled. Soil samples were air-dried, sieved, homogenized and used in the physical-chemical characterization. The remainder was ground to a fine powder to determine nitrogen concentrations and δ15N values. Leaves were dried at 50 °C, finely milled and used for the determination of nitrogen concentrations, C/N ratios and δ15N values. Root samples were cleared and stained according to Phillips and Hayman (1970), being scored for mycorrhizal colonization using the grid-line intersection method. We used analysis of variance (ANOVA) followed by a post hoc Tukey HSD test to determine differences amongst compartments. Spearman correlation coefficient was calculated to quantify the relationship between leaf δ15N and root colonization rates. Vegetation nitrogen concentration was around 22.5 g kg-1, being higher than those from litter and soil. Vegetation δ15N mean values were around -0.2 ‰, ranging from -1.6 to 2.0 ‰, being lower than those from the soils where they grow (mean values close to 3.0 ‰). Roots from all species were colonized, with the presence of typical AMF structures (hyphae, vesicles and arbuscules within root cortex). Root colonization rates ranged from less than 1 to about 55 %. In most cases, species with δ15N values had colonization rates exceeding 20 %. We observed an inverse relationship between the rate of root colonization and leaf δ15N of the species analyzed. These results suggest the importance of AMF symbiosis for nitrogen supply at such nutrient-limited coastal environments.

Fire affects root decomposition, soil food web structure, and carbon flow in tallgrass prairie

NASA Astrophysics Data System (ADS)

Shaw, E. Ashley; Denef, Karolien; Milano de Tomasel, Cecilia; Cotrufo, M. Francesca; Wall, Diana H.

2016-05-01

Root litter decomposition is a major component of carbon (C) cycling in grasslands, where it provides energy and nutrients for soil microbes and fauna. This is especially important in grasslands where fire is common and removes aboveground litter accumulation. In this study, we investigated whether fire affects root decomposition and C flow through the belowground food web. In a greenhouse experiment, we applied 13C-enriched big bluestem (Andropogon gerardii) root litter to intact tallgrass prairie soil cores collected from annually burned (AB) and infrequently burned (IB) treatments at the Konza Prairie Long Term Ecological Research (LTER) site. Incorporation of 13C into microbial phospholipid fatty acids and nematode trophic groups was measured on six occasions during a 180-day decomposition study to determine how C was translocated through the soil food web. Results showed significantly different soil communities between treatments and higher microbial abundance for IB. Root decomposition occurred rapidly and was significantly greater for AB. Microbes and their nematode consumers immediately assimilated root litter C in both treatments. Root litter C was preferentially incorporated in a few groups of microbes and nematodes, but depended on burn treatment: fungi, Gram-negative bacteria, Gram-positive bacteria, and fungivore nematodes for AB and only omnivore nematodes for IB. The overall microbial pool of root-litter-derived C significantly increased over time but was not significantly different between burn treatments. The nematode pool of root-litter-derived C also significantly increased over time, and was significantly higher for the AB treatment at 35 and 90 days after litter addition. In conclusion, the C flow from root litter to microbes to nematodes is not only measurable but also significant, indicating that higher nematode trophic levels are critical components of C flow during root decomposition, which, in turn, is significantly affected by fire. Not only does fire affect the soil community and root decomposition, but the lower microbial abundance, greater root turnover, and the increased incorporation of root litter C by microbes and nematodes for AB suggests that annual burning increases root-litter-derived C flow through the soil food web of the tallgrass prairie.

The allocation of ecosystem net primary productivity in tropical forests

PubMed Central

Malhi, Yadvinder; Doughty, Christopher; Galbraith, David

2011-01-01

The allocation of the net primary productivity (NPP) of an ecosystem between canopy, woody tissue and fine roots is an important descriptor of the functioning of that ecosystem, and an important feature to correctly represent in terrestrial ecosystem models. Here, we collate and analyse a global dataset of NPP allocation in tropical forests, and compare this with the representation of NPP allocation in 13 terrestrial ecosystem models. On average, the data suggest an equal partitioning of allocation between all three main components (mean 34 ± 6% canopy, 39 ± 10% wood, 27 ± 11% fine roots), but there is substantial site-to-site variation in allocation to woody tissue versus allocation to fine roots. Allocation to canopy (leaves, flowers and fruit) shows much less variance. The mean allocation of the ecosystem models is close to the mean of the data, but the spread is much greater, with several models reporting allocation partitioning outside of the spread of the data. Where all main components of NPP cannot be measured, litterfall is a good predictor of overall NPP (r2 = 0.83 for linear fit forced through origin), stem growth is a moderate predictor and fine root production a poor predictor. Across sites the major component of variation of allocation is a shifting allocation between wood and fine roots, with allocation to the canopy being a relatively invariant component of total NPP. This suggests the dominant allocation trade-off is a ‘fine root versus wood’ trade-off, as opposed to the expected ‘root–shoot’ trade-off; such a trade-off has recently been posited on theoretical grounds for old-growth forest stands. We conclude by discussing the systematic biases in estimates of allocation introduced by missing NPP components, including herbivory, large leaf litter and root exudates production. These biases have a moderate effect on overall carbon allocation estimates, but are smaller than the observed range in allocation values across sites. PMID:22006964

Artificial Root Exudate System (ARES): a field approach to simulate tree root exudation in soils

NASA Astrophysics Data System (ADS)

Lopez-Sangil, Luis; Estradera-Gumbau, Eduard; George, Charles; Sayer, Emma

2016-04-01

The exudation of labile solutes by fine roots represents an important strategy for plants to promote soil nutrient availability in terrestrial ecosystems. Compounds exuded by roots (mainly sugars, carboxylic and amino acids) provide energy to soil microbes, thus priming the mineralization of soil organic matter (SOM) and the consequent release of inorganic nutrients into the rhizosphere. Studies in several forest ecosystems suggest that tree root exudates represent 1 to 10% of the total photoassimilated C, with exudation rates increasing markedly under elevated CO2 scenarios. Despite their importance in ecosystem functioning, we know little about how tree root exudation affect soil carbon dynamics in situ. This is mainly because there has been no viable method to experimentally control inputs of root exudates at field scale. Here, I present a method to apply artificial root exudates below the soil surface in small field plots. The artificial root exudate system (ARES) consists of a water container with a mixture of labile carbon solutes (mimicking tree root exudate rates and composition), which feeds a system of drip-tips covering an area of 1 m2. The tips are evenly distributed every 20 cm and inserted 4-cm into the soil with minimal disturbance. The system is regulated by a mechanical timer, such that artificial root exudate solution can be applied at frequent, regular daily intervals. We tested ARES from April to September 2015 (growing season) within a leaf-litter manipulation experiment ongoing in temperate deciduous woodland in the UK. Soil respiration was measured monthly, and soil samples were taken at the end of the growing season for PLFA, enzymatic activity and nutrient analyses. First results show a very rapid mineralization of the root exudate compounds and, interestingly, long-term increases in SOM respiration, with negligible effects on soil moisture levels. Large positive priming effects (2.5-fold increase in soil respiration during the growing season) were observed in absence of aboveground forest litter, with lower or no priming when the litter was present. Preliminary results show that soil microbial community is also significantly affected by ARES.

Burning management in the tallgrass prairie affects root decomposition, soil food web structure and carbon flow

NASA Astrophysics Data System (ADS)

Shaw, E. A.; Denef, K.; Milano de Tomasel, C.; Cotrufo, M. F.; Wall, D. H.

2015-09-01

Root litter decomposition is a major component of carbon (C) cycling in grasslands, where it provides energy and nutrients for soil microbes and fauna. This is especially important in grasslands where fire is a common management practice and removes aboveground litter accumulation. In this study, we investigated whether fire affects root decomposition and C flow through the belowground food web. In a greenhouse experiment, we applied 13C-enriched big bluestem (Andropogon gerardii) root litter to intact tallgrass prairie soil cores collected from annually burned (AB) and infrequently burned (IB) treatments at the Konza Prairie Long Term Ecological Research (LTER) site. Incorporation of 13C into microbial phospholipid fatty acids and nematode trophic groups was measured on six occasions during a 180-day decomposition study to determine how C was translocated through the soil food web. Results showed significantly different soil communities between treatments and higher microbial abundance for IB. Root decomposition occurred rapidly and was significantly greater for AB. Microbes and their nematode consumers immediately assimilated root litter C in both treatments. Root litter C was preferentially incorporated in a few groups of microbes and nematodes, but depended on burn treatment: fungi, Gram-negative bacteria, Gram-positive bacteria, and fungivore nematodes for AB and only omnivore nematodes for IB. The overall microbial pool of root litter-derived C significantly increased over time but was not significantly different between burn treatments. The nematode pool of root litter-derived C also significantly increased over time, and was significantly higher for the AB treatment at 35 and 90 days after litter addition. In conclusion, the C flow from root litter to microbes to nematodes is not only measurable, but significant, indicating that higher nematode trophic levels are critical components of C flow during root decomposition which, in turn, is significantly affected by fire management practices. Not only does fire affect the soil community and root decomposition for Konza Prairie LTER soils, but the lower microbial abundance, greater root turnover, and the increased incorporation of root litter C by microbes and nematodes for AB suggests that tallgrass prairie management through annual burning increases root litter-derived C flow through the soil food web.

Chemistry and long-term decomposition of roots of Douglas-fir grown under elevated atmospheric carbon dioxide and warming conditions.

PubMed

Chen, H; Rygiewicz, P T; Johnson, M G; Harmon, M E; Tian, H; Tang, J W

2008-01-01

Elevated atmospheric CO(2) concentrations and warming may affect the quality of litters of forest plants and their subsequent decomposition in ecosystems, thereby potentially affecting the global carbon cycle. However, few data on root tissues are available to test this feedback to the atmosphere. In this study, we used fine (diameter < or = 2 mm) and small (2-10 mm) roots of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) seedlings that were grown for 4 yr in a 2 x 2 factorial experiment: ambient or elevated (+ 180 ppm) atmospheric CO(2) concentrations, and ambient or elevated (+3.8 degrees C) atmospheric temperature. Exposure to elevated CO(2) significantly increased water-soluble extractives concentration (%WSE), but had little effect on the concentration of N, cellulose, and lignin of roots. Elevated temperature had no effect on substrate quality except for increasing %WSE and decreasing the %lignin content of fine roots. No significant interaction was found between CO(2) and temperature treatments on substrate quality, except for %WSE of the fine roots. Short-term (< or = 9 mo) root decomposition in the field indicated that the roots from the ambient CO(2) and ambient temperature treatment had the slowest rate. However, over a longer period of incubation (9-36 mo) the influence of initial substrate quality on root decomposition diminished. Instead, the location of the field incubation sites exhibited significant control on decomposition. Roots at the warmer, low elevation site decomposed significantly faster than the ones at the cooler, high elevation site. This study indicates that short-term decomposition and long-term responses are not similar. It also suggests that increasing atmospheric CO(2) had little effect on the carbon storage of Douglas-fir old-growth forests of the Pacific Northwest.

Increasing shrub abundance and N addition in Arctic tundra affect leaf and root litter decomposition differently

NASA Astrophysics Data System (ADS)

McLaren, J.; van de Weg, M. J.; Shaver, G. R.; Gough, L.

2013-12-01

Changes in global climate have resulted in a ';greening' of the Arctic as the abundance of deciduous shrub species increases. Consequently, not only the living plant community, but also the litter composition changes, which in turn can affect carbon turnover patterns in the Arctic. We examined effects of changing litter composition (both root and leaf litter) on decomposition rates with a litter bag study, and specifically focused on the impact of deciduous shrub Betula nana litter on litter decomposition from two evergreen shrubs (Ledum palustre, and Vaccinium vitis-idaea) and one graminoid (Eriophorum vaginatum) species. Additionally, we investigated how decomposition was affected by nutrient availability by placing the litterbags in an ambient and a fertilized moist acidic tundra environment. Measurements were carried out seasonally over 2 years (after snow melt, mid-growing season, end growing season). We measured litter mass loss over time, as well as the respiration rates (standardized for temperature and moisture) and temperature sensitivity of litter respiration at the time of harvesting the litter bags. For leaves, Betula litter decomposed faster than the other three species, with Eriophorum leaves decomposing the slowest. This pattern was observed for both mass loss and litter respiration rates, although the differences in respiration became smaller over time. Surprisingly, combining Betula with any other species resulted in slower overall weight loss rates than would be predicted based on monoculture weight loss rates. This contrasted with litter respiration at the time of sampling, which showed a positive mixing effect of adding Betula leaf liter to the other species. Apparently, during the first winter months (September - May) Betula litter decomposition is negatively affected by mixing the species and this legacy can still be observed in the total mass loss results later in the year. For root litter there were fewer effects of species identity on root decomposition rates; only Ledum roots decomposed slower than the other three species and the overall root litter respiration rates increased with the duration of the experiment (in contrast to leaf liter respiration). A fertilized environment had no effect on overall weight loss of the leaf or root litter within the time of our study, but leaf and root litter respiration rates were significantly larger at the end of the study in the fertilized tundra.The temperature sensitivity of leaf respiration was significantly lower for leaf litter respiration than root liter respiration after fist snow melt, but this difference disappeared throughout the first growing season and neither was influenced by species composition or fertilization with N+P. Overall, our results suggest that as arctic vegetation shifts towards shrub-dominated tundra, both species composition and seasonally dependent processes will determine effects of changing vegetation types on carbon turnover in arctic ecosystems.

Interactive effects of CO2 and O3 on a ponderosa pine plant/litter/soil mesocosm.

PubMed

Olszyk, D M; Johnson, M G; Phillips, D L; Seidler, R J; Tingey, D T; Watrud, L S

2001-01-01

To study individual and combined impacts of two important atmospheric trace gases, CO2 and O3, on C and N cycling in forest ecosystems; a multi-year experiment using a small-scale ponderosa pine (Pinus ponderosa Laws.) seedling/soil/litter system was initiated in April 1998. The experiment was conducted in outdoor, sun-lit chambers where aboveground and belowground ecological processes could be studied in detail. This paper describes the approach and methodology used, and presents preliminary data for the first two growing seasons. CO2 treatments were ambient and elevated (ambient + 280 ppm). O3 treatments were elevated (hourly averages to 159 ppb, cumulative exposure > 60 ppb O3, SUM 06 approximately 10.37 ppm h), and a low control level (nearly all hourly averages <40 ppb. SUM 06 approximately 0.07 ppm h). Significant (P < 0.05) individual and interactive effects occurred with elevated CO2 and elevated O3. Elevated CO2 increased needle-level net photosynthetic rates over both seasons. Following the first season, the highest photosynthetic rates were for trees which had previously received elevated O3 in addition to elevated CO2. Elevated CO2 increased seedling stem diameters, with the greatest increase at low O3. Elevated CO2 decreased current year needle % N in the summer. For 1-year-old needles measured in the fall there was a decrease in % N with elevated CO2 at low O3, but an increase in % N with elevated CO2 at elevated O3. Nitrogen fixation (measured by acetylene reduction) was low in ponderosa pine litter and there were no significant CO2 or O3 effects. Neither elevated CO2 nor elevated O3 affected standing root biomass or root length density. Elevated O3 decreased the % N in coarse-fine (1-2 mm diameter) but not in fine (< 1 mm diameter) roots. Both elevated CO2 and elevated O3 tended to increase the number of fungal colony forming units (CFUs) in the AC soil horizon, and elevated O3 tended to decrease bacterial CFUs in the C soil horizon. Thus, after two growing seasons we showed interactive effects of O3 and CO2 in combination, in addition to responses to CO2 or O3 alone for a ponderosa pine plant/litter/soil system.

Intra-annual changes in biomass, carbon, and nitrogen dynamics at 4-year old switchgrass field trials in West Tennessee, USA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garten, Jr, C. T.; Smith, Jeffery L.; Tyler, Donald D.

2010-02-15

Switchgrass is a potential bioenergy crop that could promote soil C sequestration in some environments. We compared four cultivars on a well-drained Alfisol to test for differences in biomass, C, and N dynamics during the fourth growing season. There was no difference (P > 0.05) among cultivars and no significant cultivar x time interaction in analyses of dry mass, C stocks, or N stocks in aboveground biomass and surface litter. At the end of the growing season, mean (±SE) aboveground biomass was 2.1±0.13 kg m-2, and surface litter dry mass was approximately 50% of aboveground biomass. Prior to harvest, themore » live root:shoot biomass ratio was 0.76. There was no difference (P > 0.05) among cultivars for total biomass, C, and N stocks belowground. Total belowground biomass (90-cm soil depth) as well as coarse (greater than or equal to 1 mm diameter) and fine (< 1 mm diameter) live root biomass increased from April to October. Dead roots were less than 7% of live root biomass to a depth of 90 cm. Net production of total belowground biomass (505 ±132 g m-2) occurred in the last half of the growing season. The increase in total live belowground biomass (426 ±139 g m-2) was more or less evenly divided among rhizomes, coarse, and fine roots. The N budget for annual switchgrass production was closely balanced with 6.3 g N m-2 removed by harvest of aboveground biomass and 6.7 g N m-2 supplied by fertilization. At the location of our study in west Tennessee, intra-annual changes in biomass, C, and N stocks belowground were of greater importance to crop management for C sequestration than were differences among cultivars.« less

[Litter production and breakdown in swamps dominated by palms (Arecaceae) in northeastern Costa Rica].

PubMed

Myers, Ronald L

2013-09-01

In Raffia (Raphia taedigera) palm-swamps, it is frequent to observe high mounds at the base of the palm clumps. These mounds are formed by the accumulation of litter and organic matter, or might result from upturned roots of wind-thrown trees. The mounds serve as anchorage site for the palms, and could be important for the establishment of woody tree species in the swamp. The formation of these mounds might be explained by the unequal accumulation of organic matter in the wetland, or by differences in decomposition rates between Raffia litter versus the litter produced in adjacent mixed forests. To distinguish between these hypotheses, I compared the spatial distribution of litter in a R. taedigera swamp with the litter distribution on an adjacent slope forest, where litter distribution is expected to be homogeneous. In addition, I compared decomposition rates of major components of fine litter in three different environments: two wetlands dominated by palms (R. taedigera and Manicaria saccifera) and a slope forest that experiences lower inundation effects. On the palm swamp, noticeable concentration of litter was observed near the bases of clumps of palm as opposed to the swamp floor. In the adjacent slope forest, the magnitude of the differences in the distribution of litter is small and there is no accumulation at the base of emergent trees. It was also found that litter production increases during heavy rains and storms that follow dry periods. The swamp environment, independent of the litter, showed significantly lower decomposition rates than the surrounding forest slope. Furthermore, R. taedigera litter decomposes as fast as the slope forest litter. Overall, these results suggest that resistance to decomposition is not a major factor in the formation of mounds at the bases of R. taedigera clumps. Instead, litter accumulation contributes to the formation of the mounds that rise above the surface of the swamp.

Root carbon decomposition and microbial biomass response at different soil depths

NASA Astrophysics Data System (ADS)

Rumpel, C.

2012-12-01

The relationship between root litter addition and soil organic matter (SOM) formation in top- versus subsoils is unknown. The aim of this study was to investigate root litter decomposition and stabilisation in relation to microbial parameters in different soil depths. Our conceptual approach included incubation of 13C-labelled wheat roots at 30, 60 and 90 cm soil depth for 36 months under field conditions. Quantitative root carbon contribution to SOM was assessed, changes of bulk root chemistry studied by solid-state 13C NMR spectroscopy and lignin content and composition was assessed after CuO oxidation. Compound-specific isotope analysis allowed to assess the role of root lignin for soil C storage in the different soil depths. Microbial biomass and community structure was determined after DNA extraction. After three years of incubation, O-alkyl C most likely assigned to polysaccharides decreased in all soil depth compared to the initial root material. The degree of root litter decomposition assessed by the alkyl/O-alkyl ratio decreased with increasing soil depth, while aryl/O-alkyl ratio was highest at 60 cm depth. Root-derived lignin showed depth specific concentrations (30 < 90 < 60 cm). Its composition was soil depth independent suggesting that microbial communities in all three soil depths had similar degradation abilities. Microbial biomass C and fungi contribution increased after root litter addition. Their community structure changed after root litter addition and showed horizon specific dynamics. Our study shows that root litter addition can contribute to C storage in subsoils but did not influence C storage in topsoil. We conclude that specific conditions of single soil horizons have to be taken into account if root C dynamics are to be fully understood.

Defoliating Insect Mass Outbreak Affects Soil N Fluxes and Tree N Nutrition in Scots Pine Forests.

PubMed

Grüning, Maren M; Simon, Judy; Rennenberg, Heinz; L-M-Arnold, Anne

2017-01-01

Biotic stress by mass outbreaks of defoliating pest insects does not only affect tree performance by reducing its photosynthetic capacity, but also changes N cycling in the soil of forest ecosystems. However, how insect induced defoliation affects soil N fluxes and, in turn, tree N nutrition is not well-studied. In the present study, we quantified N input and output fluxes via dry matter input, throughfall, and soil leachates. Furthermore, we investigated the effects of mass insect herbivory on tree N acquisition (i.e., organic and inorganic 15 N net uptake capacity of fine roots) as well as N pools in fine roots and needles in a Scots pine ( Pinus sylvestris L.) forest over an entire vegetation period. Plots were either infested by the nun moth ( Lymantria monacha L.) or served as controls. Our results show an increased N input by insect feces, litter, and throughfall at the infested plots compared to controls, as well as increased leaching of nitrate. However, the additional N input into the soil did not increase, but reduce inorganic and organic net N uptake capacity of Scots pine roots. N pools in the fine roots and needles of infested trees showed an accumulation of total N, amino acid-N, protein-N, and structural N in the roots and the remaining needles as a compensatory response triggered by defoliation. Thus, although soil N availability was increased via surplus N input, trees did not respond with an increased N acquisition, but rather invested resources into defense by accumulation of amino acid-N and protein-N as a survival strategy.

Aboveground Tree Growth Varies with Belowground Carbon Allocation in a Tropical Rainforest Environment

PubMed Central

Raich, James W.; Clark, Deborah A.; Schwendenmann, Luitgard; Wood, Tana E.

2014-01-01

Young secondary forests and plantations in the moist tropics often have rapid rates of biomass accumulation and thus sequester large amounts of carbon. Here, we compare results from mature forest and nearby 15–20 year old tree plantations in lowland Costa Rica to evaluate differences in allocation of carbon to aboveground production and root systems. We found that the tree plantations, which had fully developed, closed canopies, allocated more carbon belowground - to their root systems - than did mature forest. This increase in belowground carbon allocation correlated significantly with aboveground tree growth but not with canopy production (i.e., leaf fall or fine litter production). In contrast, there were no correlations between canopy production and either tree growth or belowground carbon allocation. Enhanced allocation of carbon to root systems can enhance plant nutrient uptake, providing nutrients beyond those required for the production of short-lived tissues such as leaves and fine roots, and thus enabling biomass accumulation. Our analyses support this deduction at our site, showing that enhanced allocation of carbon to root systems can be an important mechanism promoting biomass accumulation during forest growth in the moist tropics. Identifying factors that control when, where and for how long this occurs would help us to improve models of forest growth and nutrient cycling, and to ascertain the role that young forests play in mitigating increased atmospheric carbon dioxide. PMID:24945351

Longevity of contributions to SOC stocks from roots and aboveground plant litter below a Miscanthus plantation

NASA Astrophysics Data System (ADS)

Robertson, Andrew; Smith, Pete; Davies, Christian; Bottoms, Emily; McNamara, Niall

2013-04-01

Miscanthus is a lignocellulosic crop that uses the Hatch-Slack (C4) photosynthetic pathway as opposed to most C3 vegetation native to the UK. Miscanthus can be grown for a number of practical end-uses but recently interest has increased in its viability as a bioenergy crop; both providing a renewable source of energy and helping to limit climate change by improving the carbon (C) budgets associated with energy generation. Recent studies have shown that Miscanthus plantations may increase stocks of soil organic carbon (SOC), however the longevity and origin of this 'new' SOC must be assessed. Consequently, we combined an input manipulation experiment with physio-chemical soil fractionation to quantify new SOC and CO2 emissions from Miscanthus roots, decomposing plant litter and soil individually. Further, fractionation of SOC from the top 30 cm gave insight into the longevity of that SOC. In January 2009 twenty-five 2 m2 plots were set up in a three-year old 11 hectare Miscanthus plantation in Lincolnshire, UK; with five replicates of five treatments. These treatments varied plant input to the soil by way of controlled exclusion techniques. Treatments excluded roots only ("No Roots"), surface litter only ("No Litter"), both roots and surface litter ("No Roots or Litter") or had double the litter amount added to the soil surface ("Double Litter"). A fifth treatment was a control with undisturbed roots and an average amount of litter added. Monthly measurements of CO2 emissions were taken at the soil surface from each treatment between March 2009 and March 2013, and soil C from the top 30 cm was monitored in all plots over the same period. Miscanthus-derived SOC was determined using the isotopic discrimination between C4 plant matter and C3 soil, and soil fractionation was then used to establish the longevity of that Miscanthus-derived SOC. Ongoing results for CO2 emissions indicate a strong seasonal variation; litter decomposition forms a large portion of the CO2 emissions in winter and spring whereas root respiration dominates the summer and autumn fluxes. Additionally, the "No Roots or Litter" and "No Litter" treatments have significantly less Miscanthus-derived C and therefore significantly less CO2 emitted from decomposing 'new' C. Results from soil fractionation concur with these findings and also suggest that most Miscanthus-derived SOC has fairly short mean residence times within the soil. We hypothesised that the high C input treatments would stimulate large outputs but also increase soil C stocks. However, whilst CO2 efflux varies significantly between treatments, results from the first two years of the experiment do not suggest that any increase in SOC is significant. Four years of continuous monitoring, chemical and physical soil fractionation and ecosystem C cycle modelling will allow a more comprehensive analysis of the longevity of Miscanthus-derived SOC and estimation of SOC stock change with time and plant inputs.

Defoliating Insect Mass Outbreak Affects Soil N Fluxes and Tree N Nutrition in Scots Pine Forests

PubMed Central

Grüning, Maren M.; Simon, Judy; Rennenberg, Heinz; l-M-Arnold, Anne

2017-01-01

Biotic stress by mass outbreaks of defoliating pest insects does not only affect tree performance by reducing its photosynthetic capacity, but also changes N cycling in the soil of forest ecosystems. However, how insect induced defoliation affects soil N fluxes and, in turn, tree N nutrition is not well-studied. In the present study, we quantified N input and output fluxes via dry matter input, throughfall, and soil leachates. Furthermore, we investigated the effects of mass insect herbivory on tree N acquisition (i.e., organic and inorganic 15N net uptake capacity of fine roots) as well as N pools in fine roots and needles in a Scots pine (Pinus sylvestris L.) forest over an entire vegetation period. Plots were either infested by the nun moth (Lymantria monacha L.) or served as controls. Our results show an increased N input by insect feces, litter, and throughfall at the infested plots compared to controls, as well as increased leaching of nitrate. However, the additional N input into the soil did not increase, but reduce inorganic and organic net N uptake capacity of Scots pine roots. N pools in the fine roots and needles of infested trees showed an accumulation of total N, amino acid-N, protein-N, and structural N in the roots and the remaining needles as a compensatory response triggered by defoliation. Thus, although soil N availability was increased via surplus N input, trees did not respond with an increased N acquisition, but rather invested resources into defense by accumulation of amino acid-N and protein-N as a survival strategy. PMID:28638396

Decomposition and nitrogen dynamics of 15N-labeled leaf, root, and twig litter in temperate coniferous forests

USGS Publications Warehouse

van Huysen, Tiff L.; Harmon, Mark E.; Perakis, Steven S.; Chen, Hua

2013-01-01

Litter nutrient dynamics contribute significantly to biogeochemical cycling in forest ecosystems. We examined how site environment and initial substrate quality influence decomposition and nitrogen (N) dynamics of multiple litter types. A 2.5-year decomposition study was installed in the Oregon Coast Range and West Cascades using 15N-labeled litter from Acer macrophyllum, Picea sitchensis, and Pseudotsuga menziesii. Mass loss for leaf litter was similar between the two sites, while root and twig litter exhibited greater mass loss in the Coast Range. Mass loss was greatest from leaves and roots, and species differences in mass loss were more prominent in the Coast Range. All litter types and species mineralized N early in the decomposition process; only A. macrophyllum leaves exhibited a net N immobilization phase. There were no site differences with respect to litter N dynamics despite differences in site N availability, and litter N mineralization patterns were species-specific. For multiple litter × species combinations, the difference between gross and net N mineralization was significant, and gross mineralization was 7–20 % greater than net mineralization. The mineralization results suggest that initial litter chemistry may be an important driver of litter N dynamics. Our study demonstrates that greater amounts of N are cycling through these systems than may be quantified by only measuring net mineralization and challenges current leaf-based biogeochemical theory regarding patterns of N immobilization and mineralization.

Leaf and root litter decomposition is discontinued at high altitude tropical montane rainforests contributing to carbon sequestration.

PubMed

Marian, Franca; Sandmann, Dorothee; Krashevska, Valentyna; Maraun, Mark; Scheu, Stefan

2017-08-01

We investigated how altitude affects the decomposition of leaf and root litter in the Andean tropical montane rainforest of southern Ecuador, that is, through changes in the litter quality between altitudes or other site-specific differences in microenvironmental conditions. Leaf litter from three abundant tree species and roots of different diameter from sites at 1,000, 2,000, and 3,000 m were placed in litterbags and incubated for 6, 12, 24, 36, and 48 months. Environmental conditions at the three altitudes and the sampling time were the main factors driving litter decomposition, while origin, and therefore quality of the litter, was of minor importance. At 2,000 and 3,000 m decomposition of litter declined for 12 months reaching a limit value of ~50% of initial and not decomposing further for about 24 months. After 36 months, decomposition commenced at low rates resulting in an average of 37.9% and 44.4% of initial remaining after 48 months. In contrast, at 1,000 m decomposition continued for 48 months until only 10.9% of the initial litter mass remained. Changes in decomposition rates were paralleled by changes in microorganisms with microbial biomass decreasing after 24 months at 2,000 and 3,000 m, while varying little at 1,000 m. The results show that, irrespective of litter origin (1,000, 2,000, 3,000 m) and type (leaves, roots), unfavorable microenvironmental conditions at high altitudes inhibit decomposition processes resulting in the sequestration of carbon in thick organic layers.

Inhibitory and toxic effects of extracellular self-DNA in litter: a mechanism for negative plant-soil feedbacks?

PubMed

Mazzoleni, Stefano; Bonanomi, Giuliano; Incerti, Guido; Chiusano, Maria Luisa; Termolino, Pasquale; Mingo, Antonio; Senatore, Mauro; Giannino, Francesco; Cartenì, Fabrizio; Rietkerk, Max; Lanzotti, Virginia

2015-02-01

Plant-soil negative feedback (NF) is recognized as an important factor affecting plant communities. The objectives of this work were to assess the effects of litter phytotoxicity and autotoxicity on root proliferation, and to test the hypothesis that DNA is a driver of litter autotoxicity and plant-soil NF. The inhibitory effect of decomposed litter was studied in different bioassays. Litter biochemical changes were evaluated with nuclear magnetic resonance (NMR) spectroscopy. DNA accumulation in litter and soil was measured and DNA toxicity was assessed in laboratory experiments. Undecomposed litter caused nonspecific inhibition of root growth, while autotoxicity was produced by aged litter. The addition of activated carbon (AC) removed phytotoxicity, but was ineffective against autotoxicity. Phytotoxicity was related to known labile allelopathic compounds. Restricted (13) C NMR signals related to nucleic acids were the only ones negatively correlated with root growth on conspecific substrates. DNA accumulation was observed in both litter decomposition and soil history experiments. Extracted total DNA showed evident species-specific toxicity. Results indicate a general occurrence of litter autotoxicity related to the exposure to fragmented self-DNA. The evidence also suggests the involvement of accumulated extracellular DNA in plant-soil NF. Further studies are needed to further investigate this unexpected function of extracellular DNA at the ecosystem level and related cellular and molecular mechanisms. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Nitrogen Deposition Enhances Carbon Sequestration by Plantations in Northern China

PubMed Central

Du, Zhihong; Wang, Wei; Zeng, Wenjing; Zeng, Hui

2014-01-01

Nitrogen (N) deposition and its ecological effects on forest ecosystems have received global attention. Plantations play an important role in mitigating climate change through assimilating atmospheric CO2. However, the mechanisms by which increasing N additions affect net ecosystem production (NEP) of plantations remain poorly understood. A field experiment was initialized in May 2009, which incorporated additions of four rates of N (control (no N addition), low-N (5 g N m−2 yr−1), medium-N (10 g N m−2 yr−1), and high-N (15 g N m−2 yr−1)) at the Saihanba Forestry Center, Hebei Province, northern China, a locality that contains the largest area of plantations in China. Net primary production (NPP), soil respiration, and its autotrophic and heterotrophic components were measured. Plant tissue carbon (C) and N concentrations (including foliage, litter, and fine roots), microbial biomass, microbial community composition, extracellular enzyme activities, and soil pH were also measured. N addition significantly increased NPP, which was associated with increased litter N concentrations. Autotrophic respiration (AR) increased but heterotrophic respiration (HR) decreased in the high N compared with the medium N plots, although the HR in high and medium N plots did not significantly differ from that in the control. The increased AR may derive from mycorrhizal respiration and rhizospheric microbial respiration, not live root respiration, because fine root biomass and N concentrations showed no significant differences. Although the HR was significantly suppressed in the high-N plots, soil microbial biomass, composition, or activity of extracellular enzymes were not significantly changed. Reduced pH with fertilization also could not explain the pattern of HR. The reduction of HR may be related to altered microbial C use efficiency. NEP was significantly enhanced by N addition, from 149 to 426.6 g C m−2 yr−1. Short-term N addition may significantly enhance the role of plantations as an important C sink. PMID:24498416

[Effects of litter and root exclusion on soil microbial community composition and function of four plantations in subtropical sandy coastal plain area, China].

PubMed

Sang, Chang Peng; Wan, Xiao Hua; Yu, Zai Peng; Wang, Min Huang; Lin, Yu; Huang, Zhi Qun

2017-04-18

We conducted detritus input and removal treatment (DIRT) to examine the effects of shifting above- and belowground carbon (C) inputs on soil microbial biomass, community composition and function in subtropical Pinus elliottii, Eucalyptus urophylla × Eucalyptus grandis, Acacia aulacocarpa and Casuarina equisetifolia coastal sandy plain forests, and the treatments included: root trenching, litter removal and control. Up to September 2015, one year after the experiment began, we collected the 0-10 cm soil samples from each plot. Phospholipid fatty acid (PLFA) analysis was used to characterize the microbial community composition, and micro-hole enzymatic detection technology was utilized to determine the activity of six kinds of soil enzymes. Results showed that changes in microbial biomass induced by the C input manipulations differed among tree species, and mainly affected by litter and root qualily. In E. urophylla × E. grandis stands, root trenching significantly decreased the contents of total PLFAs, Gram-positive bacteria, Gram-negative bacteria, fungi and actinomycetes by 31%, 30%, 32%, 36% and 26%, respectively. Litter removal reduced the contents of Gram-positive bacteria, fungi and actinomycetes by 24%, 27% and 24%, respectively. However, C input manipulations had no significant effect on soil microbial biomassunder other three plantations. According to the effect of C input manipulations on soil microbial community structure, litter and root exclusion decreased fungi abundance and increased actinomycetes abundance. Different treatments under different plantations resulted in various soil enzyme activities. Litter removal significantly decreased the activities of cellobiohydrolase, β-glucosidase, acid phosphatase and N-acetyl-β-d-glucosaminidase of P. elliottii, A. aulacocarpa and C. equisetifolia, root exclusion only decreased and increased the activities of β-glucosidase in P. elliottii and A. aulacocarpa forest soils, respectively. Litter removal also decreased the activities of polyphenol oxidase (PPO) and peroxidase (PER) in P. elliottii and C. equisetifolia forest soils, while root trenching had no significant effect on the activities of PPO and PER under all plantations. The properties of litter and root were the important factors in determining the soil microbial community and enzyme activity, and the change of soil microenvironment, such as temperature and moisture, caused by C input manipulations was also the important driver for the change of soil microbial property.

Long-term effects of elevated atmospheric CO{sub 2} on below-ground biomass and transformations to soil organic matter in grassland.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jastrow, J.D.; Miller, R.M.; Owensby, C.E.

2000-01-01

We determined the effects of elevated [CO{sub 2}] on the quantity and quality of below-ground biomass and several soil organic matter pools at the conclusion of an eight-year CO{sub 2} enrichment experiment on native tallgrass prairie. Plots in open-top chambers were exposed continuously to ambient and twice-ambient [CO{sub 2}] from early April through late October of each year. Soil was sampled to a depth of 30 cm beneath and next to the crowns of C4 grasses in these plots and in unchambered plots. Elevated [CO{sub 2}] increased the standing crops of rhizomes (87%), coarse roots (46%), and fibrous roots (40%)more » but had no effect on root litter (mostly fine root fragments and sloughed cortex material >500 {mu}m). Soil C and N stocks also increased under elevated [CO{sub 2}], with accumulations in the silt/clay fraction over twice that of particulate organic matter (POM; >53 {mu}m). The mostly root-like, light POM (density {<=}1.8 Mg m{sup -3}) appeared to turn over more rapidly, while the more amorphous and rendered heavy POM (density >1.8 Mg m{sup -3}) accumulated under elevated [CO{sub 2}]. Overall, rhizome and root C:N ratios were not greatly affected by CO{sub 2} enrichment. However, elevated [CO{sub 2}] increased the C:N ratios of root litter and POM in the surface 5 cm and induced a small but significant increase in the C:N ratio of the silt/clay fraction to a depth of 15 cm. Our data suggest that 8 years of CO{sub 2} enrichment may have affected elements of the N cycle (including mineralization, immobilization, and asymbiotic fixation) but that any changes in N dynamics were insufficient to prevent significant plant growth responses.« less

Net Primary Productivity and Edaphic Fertility in Two Pluvial Tropical Forests in the Chocó Biogeographical Region of Colombia

PubMed Central

Quinto-Mosquera, Harley

2017-01-01

The net primary productivity (NPP) of tropical forests is a key process of the carbon cycle and therefore for the mitigation of global climate change. It has been proposed that NPP is limited by the availability of soil nutrients in lowland tropical forests and that belowground NPP decreases as edaphic fertility increases. This hypothesis was evaluated in two localities (Opogodó and Pacurita) of the Chocó Biogeographical region, one of the rainiest of the world, where the aboveground (litter and wood) and belowground (fine and coarse roots) components of NPP were measured. Fertility parameters (pH, nutrients, and texture) were also determined and related to NPP. Total NPP was similar between locations (23.7 vs. 24.2 t ha-1 year-1 for Opogodó and Pacurita, respectively). However, components of NPP showed differences: in Pacurita, with steeper topography, NPP of wood and coarse roots were higher; therefore, differences of topography and drainage between localities probably affected the NPP of wood. On the other hand, soils of Opogodó, where NPP of fine roots was higher, showed higher contents of sand, N+, and organic matter (OM). With the increase of pH, OM, N+, K, Mg, and sand, the NPP of leaves and fine roots as well as the percentage of NPP belowground also increased, which suggests NPP limitation by multiple nutrients. The increase of NPP belowground with the availability of edaphic nutrients evidenced a redistribution of the aboveground and belowground components of NPP with the increase of soil fertility in oligotrophic systems, probably as a mechanism to improve the capture of resources. PMID:28114418

Net Primary Productivity and Edaphic Fertility in Two Pluvial Tropical Forests in the Chocó Biogeographical Region of Colombia.

PubMed

Quinto-Mosquera, Harley; Moreno, Flavio

2017-01-01

The net primary productivity (NPP) of tropical forests is a key process of the carbon cycle and therefore for the mitigation of global climate change. It has been proposed that NPP is limited by the availability of soil nutrients in lowland tropical forests and that belowground NPP decreases as edaphic fertility increases. This hypothesis was evaluated in two localities (Opogodó and Pacurita) of the Chocó Biogeographical region, one of the rainiest of the world, where the aboveground (litter and wood) and belowground (fine and coarse roots) components of NPP were measured. Fertility parameters (pH, nutrients, and texture) were also determined and related to NPP. Total NPP was similar between locations (23.7 vs. 24.2 t ha-1 year-1 for Opogodó and Pacurita, respectively). However, components of NPP showed differences: in Pacurita, with steeper topography, NPP of wood and coarse roots were higher; therefore, differences of topography and drainage between localities probably affected the NPP of wood. On the other hand, soils of Opogodó, where NPP of fine roots was higher, showed higher contents of sand, N+, and organic matter (OM). With the increase of pH, OM, N+, K, Mg, and sand, the NPP of leaves and fine roots as well as the percentage of NPP belowground also increased, which suggests NPP limitation by multiple nutrients. The increase of NPP belowground with the availability of edaphic nutrients evidenced a redistribution of the aboveground and belowground components of NPP with the increase of soil fertility in oligotrophic systems, probably as a mechanism to improve the capture of resources.

Carbon allocation patterns in boreal and hemiboreal forest ecosystems along the gradient of soil fertility

NASA Astrophysics Data System (ADS)

Kriiska, Kaie; Uri, Veiko; Frey, Jane; Napa, Ülle; Kabral, Naima; Soosaar, Kaido; Rannik, Kaire; Ostonen, Ivika

2017-04-01

Carbon (C) allocation plays a critical role in forest ecosystem carbon cycling. Changes in C allocation alter ecosystems carbon sequestration and plant-soil-atmosphere gas exchange, hence having an impact on the climate. Currently, there is lack of reliable indicators that show the direction of C accumulation patterns in forest ecosystems on regional scale. The first objective of our study was to determine the variability of carbon allocation in hemiboreal coniferous forests along the gradient of soil fertility in Estonia. We measured C stocks and fluxes, such as litter, fine root biomass and production, soil respiration etc. in 8 stands of different site types - Scots pine (Cladonia, Vaccinium, Myrtillus, Fragaria) and Norway spruce (Polytrichum, Myrtillus, Oxalis, Calamagrostis alvar). The suitability of above- and belowground litter production (AG/BG) ratio was analysed as a carbon allocation indicator. The second aim of the study was to analyse forest C allocation patterns along the north-south gradient from northern boreal Finland to hemiboreal Estonia. Finally, C sequestration in silver birch and grey alder stands were compared with coniferous stands in order to determine the impact of tree species on carbon allocation. Preliminary results indicate that estimated AG/BG ratio (0.5 ... 3.0) tends to decrease with increasing soil organic horizon C/N ratio, indicating that in less fertile sites more carbon is allocated into belowground through fine root growth and in consequence the soil organic carbon stock increases. Similar trends were found on the north-south forest gradient. However, there was a significant difference between coniferous and broadleaf stands in C allocation patterns. Net ecosystem exchange in Estonian coniferous stands varied from -1.64 ... 3.95 t C ha-1 yr-1, whereas older stands tended to be net carbon sources.

[Fire behavior of Quercus mongolica leaf litter fuelbed under zero-slope and no-wind conditions. II. Analysis and modelling of fireline intensity, fuel consumption, and combustion efficiency].

PubMed

Zhang, Ji-Li; Liu, Bo-Fei; Di, Xue-Ying; Chu, Teng-Fei; Jin, Sen

2013-12-01

Mongolian oak (Quercus mongolica) is an important constructive and accompanying species in mixed broadleaf-conifer forest in Northeast China, In this paper, a laboratory burning experiment was conducted under zero-slope and no-wind conditions to study the effects of fuel moisture content, loading, and thickness on the fireline intensity, fuel consumption, and combustion efficiency of the Mongolian oak leaf litter fuelbed. The fuel moisture content, loading, and thickness all had significant effects on the three fire behavior indices, and there existed interactions between these three affecting factors. Among the known models, the Byram model could be suitable for the prediction of local leaf litter fire intensity only after re-parameterization. The re-estimated alpha and beta parameters of the re-parameterized Byram model were 98.009 and 1.099, with an adjusted determination coefficient of 0.745, the rooted mean square error (RMSE) of 8.676 kW x m(-1), and the mean relative error (MRE) of 21%, respectively (R2 = 0.745). The re-estimated a and b by the burning efficiency method proposed by Albini were 0.069 and 0.169, and the re-estimated values were all higher than 93%, being mostly overestimated. The Consume model had a stronger suitability for the fuel. The R2 of the general linear models established for fireline intensity, fuel consumption, and burning efficiency was 0.82, 0.73 and 0.53, and the RMSE was 8.266 kW x m(-1) 0.081 kg x m(-2), and 0.203, respectively. In low intensity surface fires, the fine fuels could not be completely consumed, and thus, to consider the leaf litter and fine fuel in some forest ecosystems being completely consumed would overestimate the carbon release from forest fires.

Changes in microbial structure and functional communities at different soil depths during 13C labelled root litter degradation

NASA Astrophysics Data System (ADS)

Sanaullah, Muhammad; Baumann, Karen; Chabbi, Abad; Dignac, Marie-France; Maron, Pierre-Alain; Kuzyakov, Yakov; Rumpel, Cornelia

2014-05-01

Soil organic matter turnover depends on substrate quality and microbial activity in soil but little is known about how addition of freshly added organic material modifies the diversity of soil microbial communities with in a soil profile. We took advantage of a decomposition experiment, which was carried out at different soil depths under field conditions and sampled litterbags with 13C-labelled wheat roots, incubated in subsoil horizons at 30, 60 and 90 cm depth for up to 36 months. The effect of root litter addition on microbial community structure, diversity and activity was studied by determining total microbial biomass, PLFA signatures, molecular tools (DNA genotyping and pyrosequencing of 16S and 18S rDNAs) and extracellular enzyme activities. Automated ribosomal intergenic spacer analysis (ARISA) was also carried out to determine the differences in microbial community structure. We found that with the addition of root litter, total microbial biomass as well as microbial community composition and structure changed at different soil depths and change was significantly higher at top 30cm soil layer. Moreover, in the topsoil, population of both gram-positive and gram-negative bacteria increased with root litter addition over time, while subsoil horizons were relatively dominated by fungal community. Extra-cellular enzyme activities confirmed relatively higher fungal community at subsoil horizons compared with surface soil layer with bacteria dominant microbial population. Bacterial-ARISA profiling illustrated that the addition of root litter enhanced the abundance of Actinobacteria and Proteobacteria, at all three soil depths. These bacteria correspond to copiotrophic attributes, which can preferentially consume of labile soil organic C pools. While disappearance of oligotrophic Acidobacteria confirmed the shifting of microbial communities due to the addition of readily available substrate. We concluded that root litter mixing altered microbial community development which was soil horizon specific and its effects on soil microbial activity may impact on nutrient cycling.

Evaluation of free water and water activity measurements as functional alternatives to total moisture content in broiler excreta and litter samples.

PubMed

van der Hoeven-Hangoor, E; Rademaker, C J; Paton, N D; Verstegen, M W A; Hendriks, W H

2014-07-01

Litter moisture contents vary greatly between and within practical poultry barns. The current experiment was designed to measure the effects of 8 different dietary characteristics on litter and excreta moisture content. Additionally, free water content and water activity of the excreta and litter were evaluated as additional quality measures. The dietary treatments consisted of nonstarch polysaccharide content (NSP; corn vs. wheat), particle size of insoluble fiber (coarse vs. finely ground oat hulls), viscosity of a nonfermentable fiber (low- and high-viscosity carboxymethyl cellulose), inclusion of a clay mineral (sepiolite), and inclusion of a laxative electrolyte (MgSO4). The 8 treatments were randomly assigned to cages within blocks, resulting in 12 replicates per treatment with 6 birds per replicate. Limited effects of the dietary treatments were noted on excreta and litter water activity, and indications were observed that this measurement is limited in high-moisture samples. Increasing dietary NSP content by feeding a corn-based diet (low NSP) compared with a wheat-based diet (high NSP) increased water intake, excreta moisture and free water, and litter moisture content. Adding insoluble fibers to the wheat-based diet reduced excreta and litter moisture content, as well as litter water activity. Fine grinding of the oat hulls diminished the effect on litter moisture and water activity. However, excreta moisture and free water content were similar when fed finely or coarsely ground oat hulls. The effects of changing viscosity and adding a clay mineral or laxative deviated from results observed in previous studies. Findings of the current experiment indicate a potential for excreta free water measurement as an additional parameter to assess excreta quality besides total moisture. The exact implication of this parameter warrants further investigation. © 2014 Poultry Science Association Inc.

Quality of soluble organic C, N, and P produced by different types and species of litter: root litter versus leaf litter

USDA-ARS?s Scientific Manuscript database

In forested ecosystems, the quality of dissolved organic matter (DOM) produced by freshly senesced litter may differ by litter type and species, and these differences may influence the amount of DOM that is respired versus that which may either contribute to soil organic matter accumulation or be le...

Comparative effects of sulfuric and nitric acid rain on litter decomposition and soil microbial community in subtropical plantation of Yangtze River Delta region.

PubMed

Liu, Xin; Zhang, Bo; Zhao, Wenrui; Wang, Ling; Xie, Dejin; Huo, Wentong; Wu, Yanwen; Zhang, Jinchi

2017-12-01

Acid rain is mainly caused by dissolution of sulfur dioxide and nitrogen oxides in the atmosphere, and has a significant negative effect on ecosystems. The relative composition of acid rain is changing gradually from sulfuric acid rain (SAR) to nitric acid rain (NAR) with the rapidly growing amount of nitrogen deposition. In this study, we investigated the impact of simulated SAR and NAR on litter decomposition and the soil microbial community over four seasons since March 2015. Results first showed that the effects of acid rain on litter decomposition and soil microbial were positive in the early period of the experiment, except for SAR on soil microbes. Second, soil pH with NAR decreased more rapidly with the amount of acid rain increased in summer than with SAR treatments. Only strongly acid rain (both SAR and NAR) was capable of depressing litter decomposition and its inhibitory effect was stronger on leaf than on fine root litter. Meanwhile, NAR had a higher inhibitory effect on litter decomposition than SAR. Third, in summer, autumn and winter, PLFAs were negatively impacted by the increased acidity level resulting from both SAR and NAR. However, higher acidity level of NAR (pH=2.5) had the strongest inhibitory impact on soil microbial activity, especially in summer. In addition, Gram-negative bacteria (cy19:0) and fungi (18:1ω9) were more sensitive to both SAR and NAR, and actinomycetes was more sensitive to SAR intensity. Finally, soil total carbon, total nitrogen and pH were the most important soil property factors affecting soil microbial activity, and high microbial indices (fungi/bacteria) with high soil pH. Our results suggest that the ratio of SO 4 2- to NO 3 - in acid rain is an important factor which could affect litter decomposition and soil microbial in subtropical forest of China. Copyright © 2017. Published by Elsevier B.V.

Molecular characteristics of continuously released DOM during one year of root and leaf litter decomposition

NASA Astrophysics Data System (ADS)

Altmann, Jens; Jansen, Boris; Kalbitz, Karsten; Filley, Timothy

2013-04-01

Dissolved organic matter (DOM) is one of the most dynamic carbon pools linking the terrestrial with the aquatic carbon cycle. Besides the insecure contribution of terrestrial DOM to the greenhouse effect, DOM also plays an important role for the mobility and availability of heavy metals and organic pollutants in soils. These processes depend very much on the molecular characteristics of the DOM. Surprisingly the processes that determine the molecular composition of DOM are only poorly understood. DOM can originate from various sources, which influence its molecular composition. It has been recognized that DOM formation is not a static process and DOM characteristics vary not only between different carbon sources. However, molecular characteristics of DOM extracts have scarcely been studied continuously over a longer period of time. Due to constant molecular changes of the parent litter material or soil organic matter during microbial degradation, we assumed that also the molecular characteristics of litter derived DOM varies at different stages during root and needle decomposition. For this study we analyzed the chemical composition of root and leaf samples of 6 temperate tree species during one year of litter decomposition in a laboratory incubation. During this long-term experiment we measured continuously carbon and nitrogen contents of the water extracts and the remaining residues, C mineralization rates, and the chemical composition of water extracts and residues by Curie-point pyrolysis mass spectrometry with TMAH We focused on the following questions: (I) How mobile are molecules derived from plant polymers like tannin, lignin, suberin and cutin? (II) How does the composition of root and leaf derived DOM change over time in dependence on the stage of decomposition and species? Litter derived DOM was generally dominated by aromatic compounds. Substituded fatty acids as typically cutin or suberin derived were not detected in the water extracts. Fresh leaf and needle samples released a much higher amount of tannins than fresh root samples. At later litter decomposition stages the influence of tannins decreased and lignin derived phenols dominated the extracts. With ongoing litter degradation the degree of oxidation for the litter material increased, which was also reflected by the water extracted molecules.

Effects of Near Soil Surface Characteristics on the Soil Detachment Process in a Chronological Series of Vegetation Restoration

NASA Astrophysics Data System (ADS)

Wang, Bing

2017-04-01

The effects of near soil surface characteristics on the soil detachment process might be different at different stages of vegetation restoration. This study was performed to investigate the effects of the near soil surface factors of plant litter, biological soil crusts (BSCs), dead roots and live roots on the soil detachment process by overland flow at different stages of restoration. Soil samples (1 m long, 0.1 m wide, and 0.05 m high) under four treatment conditions were collected from 1-yr-old and 24-yr-old natural grasslands and subjected to flow scouring under five different shear stresses ranging from 5.3 to 14.6 Pa. The results indicated that the effects of near soil surface characteristics on soil detachment were substantial during the process of vegetation restoration. The total reduction in the soil detachment capacity of the 1-yr-old grassland was 98.1%, and of this total, 7.9%, 30.0% and 60.2% was attributed to the litter, BSCs and plant roots, respectively. In the 24-yr-old grassland, the soil detachment capacity decreased by 99.0%, of which 13.2%, 23.5% and 62.3% was caused by the litter, BSCs and plant roots, respectively. Combined with the previously published data of a 7-yr-old grassland, the influence of plant litter on soil detachment was demonstrated to increase with restoration time, but soil detachment was also affected by the litter type and composition. The role of BSCs was greater than that of plant litter in reducing soil detachment during the early stages of vegetation recovery. However, its contribution weakened with time since restoration. The influence of plant roots accounted for at least half or up to two-thirds of the total near soil surface factors, of which more than 72.6% was attributed to the physical binding effects of the roots. The chemical bonding effect of the roots increased with time since restoration and was greater than the effect of the litter on soil detachment in the late stages of vegetation restoration. The correction coefficients of near soil surface characteristics for rill erodibility were provided for the Water Erosion Prediction Project (WEPP) model.

The inflow of Cs-137 in soil with root litter and root exudates of Scots pine

NASA Astrophysics Data System (ADS)

Shcheglov, Alexey; Tsvetnova, Olga; Popova, Evgenia

2017-04-01

In the model experiment on evaluation of Cs-137 inflow in the soil with litter of roots and woody plants root exudates on the example of soil and water cultures of Scots pine (Pinus sylvestris L.) was shown, that through 45 days after the deposit Cs-137 solution on pine needles (specific activity of solution was 3.718*106 Bk) of the radionuclide in all components of model systems has increased significantly: needles, small branches and trunk by Cs-137 surface contamination during the experiment; roots as a result of the internal distribution of the radionuclide in the plant; soil and soil solution due to the of receipt Cs-137 in the composition of root exudates and root litter. Over 99% of the total reserve of Cs-137 accumulated in the components of the soil and water systems, accounted for bodies subjected to external pollution (needles and small branches) and <0.5% - on the soil / soil solution, haven't been subjected to surface contamination. At the same contamination of soil and soil solution by Cs-137 in the model experiment more than a> 99.9% was due to root exudates

[Effects of litterfall and root input on soil physical and chemical properties in Pinus massoniana plantations in Three Gorges Reservoir Area, China].

PubMed

Ge, Xiao-Gai; Huang, Zhi-Lin; Cheng, Rui-Mei; Zeng, Li-Xiong; Xiao, Wen-Fa; Tan, Ben-Wang

2012-12-01

An investigation was made on the soil physical and chemical properties in different-aged Pinus massoniana plantations in Three Gorges Reservoir Area under effects of litterfall and roots. The annual litter production in mature stand was 19.4% and 65.7% higher than that in nearly mature and middle-aged stands, respectively. The litter standing amount was in the sequence of mature stand > middle-aged stand > nearly mature stand, while the litter turnover coefficient was in the order of nearly mature stand (0.51) > mature stand (0.40) > middle-aged stand (0.36). The total root biomass, live root biomass, and dead root biomass were the highest in middle-aged stand, and the lowest in nearly mature stand. In middle-aged stand, soil total porosity was the highest, and soil bulk density was the lowest. Soil organic matter and total nitrogen contents were in the order of mature stand > middle-aged stand > nearly mature stand, soil nitrate nitrogen occupied a larger proportion of soil mineral N in nearly mature stand, while ammonium nitrogen accounted more in middle-aged and mature stands. In nearly mature stand, litter production was moderate but turnover coefficient was the highest, and soil nutrient contents were the lowest. In middle-aged stand, root biomass and soil total porosity were the highest, and soil bulk density were the lowest. In mature stand, root biomass was lower while soil nutrient contents were the highest. The increase of root biomass could improve soil physical properties.

Impact of Native and Invasive Earthworm Activity on Forest Soil Organic Matter Dynamics

NASA Astrophysics Data System (ADS)

Top, Sara; Filley, Timothy

2010-05-01

Many northern North American forests are experiencing the introduction of exotic European lumbricid species earthworms with documented losses in litter layers, expansion of A-horizons, loss of the organic horizon, changes in fine root density, and shifts in microbial populations as a result. Some of these forests were previously devoid of these ecosystem engineers. We compare the soil isotope and molecular chemistry from two free air CO2 enrichment (FACE) forest experiments (aspen FACE at Rhinelander, Wisconsin and sweet gum FACE at Oak Ridge National Lab, Tennessee) that lie within the zones of earthworm invasion. These sites exhibit differences in amounts of exotic and native species as well as endogeic (predominantly mineral soil dwelling) and epigeic (litter and organic matter horizon dwelling) types. We investigated the impact of earthworm activity by tracking the relative abundance and stable carbon isotope compositions of lignin and substituted fatty acids extracted from isolated earthworms and their fecal pellets and from host soils. Additionally, 15N-labeled additions to the soil provide additional methods for tracking earthworm impacts. Indications of root vs leaf input to earthworm casts and fecal matter were derived from differences in the chemical composition of cutin, suberin, and lignin. The isotopically depleted CO2 used in FACE and the resulting isotopically depleted plant organic matter afford an excellent opportunity to assess biopolymer-specific turnover dynamics. We find that endogeic species are proportionately more responsible for fine root cycling while some epigeic species are responsible for microaggregation of foliar cutin. CSIA of fecal pellet lignin and SFA indicate how these biopolymer pools can be derived from variable sources, roots, background soil, foliar tissue within one earthworm. Additionally, CSIA indicates the distinct roles that different earthworm types have in "aging" surface soil biopolymer pools through encapsulation and upward transport of deeper soil carbon, and "freshening" deeper soil biopolymer pools through downward transport of surface carbon to deeper layers. Although, endogeic species burrow down below 30 cm in these systems, comparison of 13C and 15N in soil layers and fecal matter indicate their greatest impact is restricted to the upper 5 cm. As earthworm species abundance and activity are not is steady state in these forests, the role of these important invertebrates should be more considered when assessing the ability of forest soils to accumulate new plant input.

Role of Native and Exotic Earthworms in Plant Biopolymer Dynamics in Forest Soil

NASA Astrophysics Data System (ADS)

Filley, Timothy

2010-05-01

Many forests within northern North America are experiencing the introduction of earthworms for the first time, presumably since before the last major glaciation. Forest dynamics are undergoing substantial changes because of the activity of the mainly European lumbricid species. Documented losses in litter layers, expansion of A-horizons, loss of the organic horizon, changes in fine root density, and shifts in microbial populations have all been documented in invaded zones. Two free air CO2 enrichment (FACE) forest experiments (aspen FACE at Rhinelander, Wisconsin and sweet gum FACE at Oak Ridge National Lab, Tennessee) lie within the zones of invasion and exhibit differences in amounts of exotic and native species as well as endogeic (predominantly mineral soil dwelling) and epigeic (litter and organic matter horizon dwelling) types. Considerations of carbon accrual dynamics and relative input of above vs. below ground plant input in these young successional systems do not consider the potential impact of these ecosystem engineers. We investigated the impact of earthworm activity by tracking the relative abundance and stable carbon isotope compositions of lignin and substituted fatty acids extracted from isolated earthworms and their fecal pellets and from host soils. Indications of root vs leaf input to earthworm casts and fecal matter were derived from differences in the chemical composition of cutin, suberin, and lignin. The isotopically depleted CO2 used in FACE and the resulting isotopically depleted plant organic matter afford an excellent opportunity to assess biopolymer-specific turnover dynamics. We find that endogeic species are proportionately more responsible for fine root cycling while some epigeic species are responsible for microaggregation of foliar cutin. CSIA of fecal pellet lignin and SFA indicates how these biopolymer pools can be derived from variable sources, roots, background soil, foliar tissue within one earthworm. Additionally, CSIA indicates the distinct roles that different earthworm types have in "aging" surface soil biopolymer pools through encapsulation and upward transport of deeper soil carbon, and "freshening" deeper soil biopolymer pools through downward transport of surface carbon to deeper layers,. As earthworm species abundance and activity are not is steady state in many forests, the role of these important invertebrates should be more considered when assessing the changing soil state.

Slow decomposition of lower order roots: a key mechanism of root carbon and nutrient retention in the soil.

PubMed

Fan, Pingping; Guo, Dali

2010-06-01

Among tree fine roots, the distal small-diameter lateral branches comprising first- and second-order roots lack secondary (wood) development. Therefore, these roots are expected to decompose more rapidly than higher order woody roots. But this prediction has not been tested and may not be correct. Current evidence suggests that lower order roots may decompose more slowly than higher order roots in tree species associated with ectomycorrhizal (EM) fungi because they are preferentially colonized by fungi and encased by a fungal sheath rich in chitin (a recalcitrant compound). In trees associated with arbuscular mycorrhizal (AM) fungi, lower order roots do not form fungal sheaths, but they may have poorer C quality, e.g. lower concentrations of soluble carbohydrates and higher concentrations of acid-insolubles than higher order roots, thus may decompose more slowly. In addition, litter with high concentrations of acid insolubles decomposes more slowly under higher N concentrations (such as lower order roots). Therefore, we propose that in both AM and EM trees, lower order roots decompose more slowly than higher order roots due to the combination of poor C quality and high N concentrations. To test this hypothesis, we examined decomposition of the first six root orders in Fraxinus mandshurica (an AM species) and Larix gmelinii (an EM species) using litterbag method in northeastern China. We found that lower order roots of both species decomposed more slowly than higher order roots, and this pattern appears to be associated mainly with initial C quality and N concentrations. Because these lower order roots have short life spans and thus dominate root mortality, their slow decomposition implies that a substantial fraction of the stable soil organic matter pool is derived from these lower order roots, at least in the two species we studied.

Long-term litter manipulation alters soil organic matter turnover in a temperate deciduous forest.

PubMed

Wang, Jun-Jian; Pisani, Oliva; Lin, Lisa H; Lun, Olivia O Y; Bowden, Richard D; Lajtha, Kate; Simpson, André J; Simpson, Myrna J

2017-12-31

Understanding soil organic matter (OM) biogeochemistry at the molecular-level is essential for assessing potential impacts from management practices and climate change on shifts in soil carbon storage. Biomarker analyses and nuclear magnetic resonance (NMR) spectroscopy were used in an ongoing detrital input and removal treatment experiment in a temperate deciduous forest in Pennsylvania, USA, to examine how above- and below-ground plant inputs control soil OM quantity and quality at the molecular-level. From plant material to surface soils, the free acyclic lipids and cutin, suberin, and lignin biomarkers were preferentially retained over free sugars and free cyclic lipids. After 20years of above-ground litter addition (Double Litter) or exclusion (No Litter) treatments, soil OM composition was relatively more degraded, as revealed by solid-state 13 C NMR spectroscopy. Under Doubled Litter inputs, soil carbon and phospholipid fatty acid (PLFA) concentrations were unchanged, suggesting that the current OM degradation status is a reflection of microbial-mediated degradation that occurred prior to the 20-year sampling campaign. Soil OM degradation was higher in the No Litter treatments, likely due to the decline in fresh, above-ground litter inputs over time. Furthermore, root and root and litter exclusion treatments (No Roots and No Inputs, respectively) both significantly reduced free sugars and PLFAs and increased preservation of suberin-derived compounds. PLFA stress ratios and the low N-acetyl resonances from diffusion edited 1 H NMR also indicate substrate limitations and reduced microbial biomass with these treatments. Overall, we highlight that storage of soil carbon and its biochemical composition do not linearly increase with plant inputs because the microbial processing of soil OM is also likely altered in the studied forest. Copyright © 2017 Elsevier B.V. All rights reserved.

Potential for post-closure radionuclide redistribution due to biotic intrusion: aboveground biomass, litter production rates, and the distribution of root mass with depth at material disposal area G, Los Alamos National Laboratory

DOE Office of Scientific and Technical Information (OSTI.GOV)

French, Sean B; Christensen, Candace; Jennings, Terry L

2008-01-01

Low-level radioactive waste (LLW) generated at the Los Alamos National Laboratories (LANL) is disposed of at LANL's Technical Area (T A) 54, Material Disposal Area (MDA) G. The ability of MDA G to safely contain radioactive waste during current and post-closure operations is evaluated as part of the facility's ongoing performance assessment (PA) and composite analysis (CA). Due to the potential for uptake and incorporation of radio nuclides into aboveground plant material, the PA and CA project that plant roots penetrating into buried waste may lead to releases of radionuclides into the accessible environment. The potential amount ofcontamination deposited onmore » the ground surface due to plant intrusion into buried waste is a function of the quantity of litter generated by plants, as well as radionuclide concentrations within the litter. Radionuclide concentrations in plant litter is dependent on the distribution of root mass with depth and the efficiency with which radionuclides are extracted from contaminated soils by the plant's roots. In order to reduce uncertainties associated with the PA and CA for MDA G, surveys are being conducted to assess aboveground biomass, plant litter production rates, and root mass with depth for the four prominent vegetation types (grasses, forbs, shrubs and trees). The collection of aboveground biomass for grasses and forbs began in 2007. Additional sampling was conducted in October 2008 to measure root mass with depth and to collect additional aboveground biomass data for the types of grasses, forbs, shrubs, and trees that may become established at MDA G after the facility undergoes final closure, Biomass data will be used to estimate the future potential mass of contaminated plant litter fall, which could act as a latent conduit for radionuclide transport from the closed disposal area. Data collected are expected to reduce uncertainties associated with the PA and CA for MDA G and ultimately aid in the assessment and subsequent prevention of radionuclide transport within the environment from the closed disposal area and potential exposure to site workers and the public.« less

Regional factors rather than forest type drive the community structure of soil living oribatid mites (Acari, Oribatida).

PubMed

Erdmann, Georgia; Scheu, Stefan; Maraun, Mark

2012-06-01

Most European forests are managed by humans. However, the manner and intensity of management vary. While the effect of forest management on above-ground communities has been investigated in detail, effects on the below-ground fauna remain poorly understood. Oribatid mites are abundant microarthropods in forest soil and important decomposers in terrestrial ecosystems. Here, we investigated the effect of four forest types (i.e., managed coniferous forests; 30 and 70 years old managed beech forests; natural beech forests) on the density, diversity and community structure of oribatid mites (Acari). The study was replicated at three regions in Germany: the Swabian Alb, the Hainich and the Schorfheide. To relate changes in oribatid mite community structure to environmental factors, litter mass, pH, C and N content of litter, fine roots and C content of soil were measured. Density of oribatid mites was highest in the coniferous forests and decreased in the order 30 years old, 70 years old, and natural beech forests. Mass of the litter layer and density of oribatid mites were strongly correlated indicating that the litter layer is an important factor regulating oribatid mite densities. Diversity of oribatid mites was little affected by forest type indicating that they harbor similar numbers of niches. Species composition differed between the forest types, suggesting different types of niches. The community structure of oribatid mites differed more strongly between the three regions than between the forest types indicating that regional factors are more important than effects associated with forest type.

Management Impacts on Carbon Dynamics in a Sierra Nevada Mixed Conifer Forest

PubMed Central

Dore, Sabina; Fry, Danny L.; Collins, Brandon M.; Vargas, Rodrigo; York, Robert A.; Stephens, Scott L.

2016-01-01

Forest ecosystems can act as sinks of carbon and thus mitigate anthropogenic carbon emissions. When forests are actively managed, treatments can alter forests carbon dynamics, reducing their sink strength and switching them from sinks to sources of carbon. These effects are generally characterized by fast temporal dynamics. Hence this study monitored for over a decade the impacts of management practices commonly used to reduce fire hazards on the carbon dynamics of mixed-conifer forests in the Sierra Nevada, California, USA. Soil CO2 efflux, carbon pools (i.e. soil carbon, litter, fine roots, tree biomass), and radial tree growth were compared among un-manipulated controls, prescribed fire, thinning, thinning followed by fire, and two clear-cut harvested sites. Soil CO2 efflux was reduced by both fire and harvesting (ca. 15%). Soil carbon content (upper 15 cm) was not significantly changed by harvest or fire treatments. Fine root biomass was reduced by clear-cut harvest (60–70%) but not by fire, and the litter layer was reduced 80% by clear-cut harvest and 40% by fire. Thinning effects on tree growth and biomass were concentrated in the first year after treatments, whereas fire effects persisted over the seven-year post-treatment period. Over this period, tree radial growth was increased (25%) by thinning and reduced (12%) by fire. After seven years, tree biomass returned to pre-treatment levels in both fire and thinning treatments; however, biomass and productivity decreased 30%-40% compared to controls when thinning was combined with fire. The clear-cut treatment had the strongest impact, reducing ecosystem carbon stocks and delaying the capacity for carbon uptake. We conclude that post-treatment carbon dynamics and ecosystem recovery time varied with intensity and type of treatments. Consequently, management practices can be selected to minimize ecosystem carbon losses while increasing future carbon uptake, resilience to high severity fire, and climate related stresses. PMID:26918460

Initial Soil Organic Matter Content Influences the Storage and Turnover of Litter-, Root- and Soil Carbon in Grasslands

NASA Astrophysics Data System (ADS)

Liu, L.; Xu, S.; Li, P.; Sayer, E. J.

2017-12-01

Grassland degradation is a worldwide problem that often leads to substantial loss of soil organic matter (SOM). Understanding how SOM content influences the stabilization of plant carbon (C) to form soil C is important to evaluate the potential of degraded grasslands to sequester additional C. We conducted a greenhouse experiment using C3 soils with six levels of SOM content and planted the C4 grass Cleistogenes squarrosa and/or added its litter to investigate how SOM content regulates the storage of new soil C derived from litter and roots, the decomposition of extant soil C, and the formation of soil aggregates. We found that microbial biomass carbon (MBC) increased with SOM content, and increased the mineralization of litter C. Both litter addition and planted treatments increased the amount of new C inputs to soil. However, litter addition had no significant impacts on the mineralization of extant soil C, but the presence of living roots significantly accelerated it. Thus, by the end of the experiment, soil C content was significantly higher in the litter addition treatments, but was not affected by planted treatments. The soil macroaggregate fraction increased with SOM content and was positively related to MBC. Overall, our study suggests that as SOM content increases, plant growth and soil microbes become more active, which allows microbes to process more plant-derived C and increases new soil C formation. The interactions between SOM content and plant C inputs should be considered when evaluating soil C turnover in degraded grasslands.

Response of early Ruppia cirrhosa litter breakdown to nutrient addition in a coastal lagoon affected by agricultural runoff

NASA Astrophysics Data System (ADS)

Menéndez, Margarita

2009-05-01

The response of early Ruppia cirrhosa Petagna (Grande) litter decomposition to external nitrogen and phosphorus availability in La Tancada (Ebro River, NE Spain), a coastal lagoon that receives agricultural freshwater runoff from rice fields has been examined. Recently abscised dead R. cirrhosa stems were collected and 25 g of fresh weight was placed in litter bags with a mesh size of 100 μm and 1 mm. These bags were fertilised by adding nitrogen (N), a mixture of nitrogen plus phosphorus (N + P), or phosphorus (P), or were left untreated (CT). Macroinvertebrates were retrieved from the bags and the ash-free dry weight, and carbon, and N and P content of the remaining plant material were measured after 0, 3, 7, 14, 22 and 32 days. Litter decomposition rates, k (day -1), were estimated using a simple exponential model. Litter decay was clearly accelerated by the addition of P in the fine (100 μm) litter bags (0.042), but when N was added alone (0.0099) the decomposition rate was lower than in the CT treatments (0.022). No significant difference was observed between the N (0.0099-0.018) and N + P (0.0091-0.015) treatments in either the fine or the coarse (1 mm) litter bags. These results could be attributed to the relatively high availability of external (environmental) and internal (detritus contents) N. No significant effect of macro invertebrates was observed in the CT treatment or under N or P or N + P addition. The ratio between the decomposition rates in coarse and fine litter bags (k c/k f) was lower in disturbed Tancada lagoon (0.82) than in Cesine lagoon (2.11), a similar Mediterranean coastal water body with almost pristine conditions. These results indicate that, in addition to data on macroinvertebrate community structure, decomposition rates could also be used to assess water quality in coastal lagoons.

A mechanistic soil biogeochemistry model with explicit representation of microbial and macrofaunal activities and nutrient cycles

NASA Astrophysics Data System (ADS)

Fatichi, Simone; Manzoni, Stefano; Or, Dani; Paschalis, Athanasios

2016-04-01

The potential of a given ecosystem to store and release carbon is inherently linked to soil biogeochemical processes. These processes are deeply connected to the water, energy, and vegetation dynamics above and belowground. Recently, it has been advocated that a mechanistic representation of soil biogeochemistry require: (i) partitioning of soil organic carbon (SOC) pools according to their functional role; (ii) an explicit representation of microbial dynamics; (iii) coupling of carbon and nutrient cycles. While some of these components have been introduced in specialized models, they have been rarely implemented in terrestrial biosphere models and tested in real cases. In this study, we combine a new soil biogeochemistry model with an existing model of land-surface hydrology and vegetation dynamics (T&C). Specifically the soil biogeochemistry component explicitly separates different litter pools and distinguishes SOC in particulate, dissolved and mineral associated fractions. Extracellular enzymes and microbial pools are explicitly represented differentiating the functional roles of bacteria, saprotrophic and mycorrhizal fungi. Microbial activity depends on temperature, soil moisture and litter or SOC stoichiometry. The activity of macrofauna is also modeled. Nutrient dynamics include the cycles of nitrogen, phosphorous and potassium. The model accounts for feedbacks between nutrient limitations and plant growth as well as for plant stoichiometric flexibility. In turn, litter input is a function of the simulated vegetation dynamics. Root exudation and export to mycorrhiza are computed based on a nutrient uptake cost function. The combined model is tested to reproduce respiration dynamics and nitrogen cycle in few sites where data were available to test plausibility of results across a range of different metrics. For instance in a Swiss grassland ecosystem, fine root, bacteria, fungal and macrofaunal respiration account for 40%, 23%, 33% and 4% of total belowground respiration, respectively. Root exudation and carbon export to mycorrhizal represent about 7% of plant Net Primary Production. The model allows exploring the temporal dynamics of respiration fluxes from the different ecosystem components and designing virtual experiments on the controls exerted by environmental variables and/or soil microbes and mycorrhizal associations on soil carbon storage, plant growth, and nutrient leaching.

Composition of riparian litter input regulates organic matter decomposition: Implications for headwater stream functioning in a managed forest landscape.

PubMed

Lidman, Johan; Jonsson, Micael; Burrows, Ryan M; Bundschuh, Mirco; Sponseller, Ryan A

2017-02-01

Although the importance of stream condition for leaf litter decomposition has been extensively studied, little is known about how processing rates change in response to altered riparian vegetation community composition. We investigated patterns of plant litter input and decomposition across 20 boreal headwater streams that varied in proportions of riparian deciduous and coniferous trees. We measured a suite of in-stream physical and chemical characteristics, as well as the amount and type of litter inputs from riparian vegetation, and related these to decomposition rates of native (alder, birch, and spruce) and introduced (lodgepole pine) litter species incubated in coarse- and fine-mesh bags. Total litter inputs ranged more than fivefold among sites and increased with the proportion of deciduous vegetation in the riparian zone. In line with differences in initial litter quality, mean decomposition rate was highest for alder, followed by birch, spruce, and lodgepole pine (12, 55, and 68% lower rates, respectively). Further, these rates were greater in coarse-mesh bags that allow colonization by macroinvertebrates. Variance in decomposition rate among sites for different species was best explained by different sets of environmental conditions, but litter-input composition (i.e., quality) was overall highly important. On average, native litter decomposed faster in sites with higher-quality litter input and (with the exception of spruce) higher concentrations of dissolved nutrients and open canopies. By contrast, lodgepole pine decomposed more rapidly in sites receiving lower-quality litter inputs. Birch litter decomposition rate in coarse-mesh bags was best predicted by the same environmental variables as in fine-mesh bags, with additional positive influences of macroinvertebrate species richness. Hence, to facilitate energy turnover in boreal headwaters, forest management with focus on conifer production should aim at increasing the presence of native deciduous trees along streams, as they promote conditions that favor higher decomposition rates of terrestrial plant litter.

Interactions Between Pinus taeda (loblolly) Fine Roots and Soil Fungi: Impacts of Elevated CO2, N Availability, and Spatial Distribution of Fungi on Fine Root Persistence and Turnover

NASA Astrophysics Data System (ADS)

Strand, A.; Beidler, K.; McGlinn, D.; Pritchard, S. G.

2016-12-01

Fine root turnover represents the most significant mode of flux from plants into soil C pools. Unfortunately fine root senescence and decomposition, processes critical in turnover, are particularly understudied. For example, little is known about either the factors that influence fine-root decomposition or the fate of compounds they contain during root death. Better understanding fine root senescence and decomposition should reduce uncertainty associated with global climate models; including re-uptake of materials in dying leaves into these models has already been shown to increase their accuracy. Over 4400 individual fine-roots and 4734 rhizomorphs were tracked from initiation until disintegration over 12 years using minirhizotrons at the Duke FACE site. Image-based approaches such as minirhizotrons cannot directly assess fine-root physiological status. To assess fine-root function directly, we are now conducting manipulative experiments in P. taeda in which fine-root senescence is induced through two treatments, steam- and direct hand-girdling. Physiological status is then assessed by examining gene-expression, root anatomy and chemical composition of manipulated roots. Changing [CO2] did not change persistence times for roots, but did impact rhizomorph persistence. Both roots and rhizomorphs showed interactions between effects of N and CO2 on persistence. Most interesting is the interaction between fine-roots and rhizomorphs: fine root persistence times are reduced in the presence of rhizomorphs, but this effect depends on the amount of N available. Finally, we found experimentally inducing senescence via steam girdling to be very effective relative to hand-girdling. These results provide evidence of the importance of priming on function of soil fungi and the role of N availability on fine-root turnover. The ability to stimulate fine-root senescence provides a powerful experimental tool to examine the fates of resources contained in fine-root pools as these roots turn over.

Decomposition and nitrogen dynamics of 15N-labeled leaf, root, and twig litter in temperate coniferous forests

Treesearch

T.L. van Huysen; M.E. Harmon; S.S. Perakis; H. Chen

2013-01-01

Litter nutrient dynamics contribute significantly to biogeochemical cycling in forest ecosystems. We examined how site environment and initial substrate quality influence decomposition and nitrogen (N) dynamics of multiple litter types. A 2.5-year decomposition study was installed in the Oregon Coast Range and West Cascades using 15N-labeled...

Unravelling ecosystem functions at the Amazonia-Cerrado transition: II. Carbon stocks and CO2 soil efflux in cerradão forest undergoing ecological succession

NASA Astrophysics Data System (ADS)

Peixoto, Karine S.; Marimon-Junior, Ben Hur; Marimon, Beatriz S.; Elias, Fernando; de Farias, Josenilton; Freitag, Renata; Mews, Henrique A.; das Neves, Eder C.; Prestes, Nayane Cristina C. S.; Malhi, Yadvinder

2017-07-01

The transition region between two major South American biomes, the Amazon forest and the Cerrado (Brazilian savanna), has been substantially converted into human-modified ecosystems. Nevertheless, the recovery dynamics of ecosystem functions in this important zone of (ecological) tension (ZOT) remain poorly understood. In this study, we compared two areas of cerradão (a forest-woodland of the Brazilian savanna; Portuguese augmentative of cerrado), one in secondary succession (SC) and one adjacent and well preserved (PC), to test whether the ecosystem functions lost after conversion to pasture were restored after 22 years of regeneration. We tested the hypothesis that the increase in annual aboveground biomass in the SC would be greater than that in the PC because of anticipated successional gains. We also investigated soil CO2 efflux, litter layer content, and fine root biomass in both the SC and PC. In terms of biomass recovery our hypothesis was not supported: the biomass did not increase in the successional area over the study period, which suggested limited capacity for recovery in this key ecosystem compartment. By contrast, the structure and function of the litter layer and root mat were largely reconstituted in the secondary vegetation. Overall, we provide evidence that 22 years of secondary succession were not sufficient for these short and open forests (e.g., cerradão) in the ZOT to recover ecosystem functions to the levels observed in preserved vegetation of identical physiognomy.

[Biogeochemical cycles in natural forest and conifer plantations in the high mountains of Colombia].

PubMed

León, Juan Diego; González, María Isabel; Gallardo, Juan Fernando

2011-12-01

Plant litter production and decomposition are two important processes in forest ecosystems, since they provide the main organic matter input to soil and regulate nutrient cycling. With the aim to study these processes, litterfall, standing litter and nutrient return were studied for three years in an oak forest (Quercus humboldtii), pine (Pinus patula) and cypress (Cupressus lusitanica) plantations, located in highlands of the Central Cordillera of Colombia. Evaluation methods included: fine litter collection at fortnightly intervals using litter traps; the litter layer samples at the end of each sampling year and chemical analyses of both litterfall and standing litter. Fine litter fall observed was similar in oak forest (7.5 Mg ha/y) and in pine (7.8 Mg ha/y), but very low in cypress (3.5 Mg ha/y). Litter standing was 1.76, 1.73 and 1.3 Mg ha/y in oak, pine and cypress, respectively. The mean residence time of the standing litter was of 3.3 years for cypress, 2.1 years for pine and 1.8 years for oak forests. In contrast, the total amount of retained elements (N, P, S, Ca, Mg, K, Cu, Fe, Mn and Zn) in the standing litter was higher in pine (115 kg/ha), followed by oak (78 kg/ha) and cypress (24 kg/ha). Oak forests showed the lowest mean residence time of nutrients and the highest nutrients return to the soil as a consequence of a faster decomposition. Thus, a higher nutrient supply to soils from oaks than from tree plantations, seems to be an ecological advantage for recovering and maintaining the main ecosystem functioning features, which needs to be taken into account in restoration programs in this highly degraded Andean mountains.

Redefining fine roots improves understanding of belowground contributions to terrestrial biosphere processes

DOE PAGES

McCormack, M. Luke; Dickie, Ian A.; Eissenstat, David M.; ...

2015-03-10

Fine roots acquire essential soil resources and mediate biogeochemical cycling in terrestrial ecosystems. Estimates of carbon and nutrient allocation to build and maintain these structures remain uncertain due to challenges in consistent measurement and interpretation of fine-root systems. We define fine roots as all roots less than or equal to 2 mm in diameter, yet it is now recognized that this approach fails to capture the diversity of form and function observed among fine-root orders. We demonstrate how order-based and functional classification frameworks improve our understanding of dynamic root processes in ecosystems dominated by perennial plants. In these frameworks, finemore » roots are separated into either individual root orders or functionally defined into a shorter-lived absorptive pool and a longer-lived transport fine root pool. Furthermore, using these frameworks, we estimate that fine-root production and turnover represent 22% of terrestrial net primary production globally a ca. 30% reduction from previous estimates assuming a single fine-root pool. In the future we hope to develop tools to rapidly differentiate functional fine-root classes, explicit incorporation of mycorrhizal fungi in fine-root studies, and wider adoption of a two-pool approach to model fine roots provide opportunities to better understand belowground processes in the terrestrial biosphere.« less

Recent (<4 year old) Leaf Litter is Not a Major Source of Microbial Carbon in a Temperate Forest Mineral Soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kramer, Christiane; Trumbore, Susan E.; Froberg, Mats J.

2010-01-01

Microbial communities in soil A horizons derive their carbon from several potential sources: organic carbon (C) transported down from overlying litter and organic horizons, root-derived C, or soil organic matter. We took advantage of a multi-year experiment that manipulated the {sup 14}C isotope signature of surface leaf litter inputs in a temperate forest at the Oak Ridge Reservation, Tennessee, USA, to quantify the contribution of recent leaf litter C to microbial respiration and biomarkers in the underlying mineral soil. We observed no measurable difference (< {approx}40{per_thousand} given our current analytical methods) in the radiocarbon signatures of microbial phospholipid fatty acidsmore » (PLFA) isolated from the top 10 cm of mineral soil in plots that experienced 3 years of litterfall that differed in each year by {approx}750{per_thousand} between high-{sup 14}C and low-{sup 14}C treatments. Assuming any difference in {sup 14}C between the high- and low-{sup 14}C plots would reflect C derived from these manipulated litter additions, we estimate that <6% of the microbial C after 4 years was derived from the added 1-4-year-old surface litter. Large contributions of C from litter < 1 year (or >4 years) old (which fell after (or prior to) the manipulation and therefore did not differ between plots) are not supported because the {sup 14}C signatures of the PLFA compounds (averaging 200-220{per_thousand}) is much higher that of the 2004-5 leaf litter (115{per_thousand}) or pre-2000 litter. A mesocosm experiment further demonstrated that C leached from {sup 14}C-enriched surface litter or the O horizon was not a detectable C source in underlying mineral soil microbes during the first eight months after litter addition. Instead a decline in the {sup 14}C of PLFA over the mesocosm experiment likely reflected the loss of a pre-existing substrate not associated with added leaf litter. Measured PLFA {Delta}{sup 14}C signatures were higher than those measured in bulk mineral soil organic matter in our experiments, but fell within the range of {sup 14}C values measured in mineral soil roots. Together, our experiments suggest that root-derived C is the major (>60%) source of C for microbes in these temperate deciduous forest soils.« less

[Distribution of fine root biomass of main planting tree species in Loess Plateau, China].

PubMed

Jian, Sheng-Qi; Zhao, Chuan-Yan; Fang, Shu-Min; Yu, Kai

2014-07-01

The distribution of fine roots of Pinus tabuliformis, Populus tomentosa, Prunus armeniaca, Robinia pseudoacacia, Hippophae rhamnoides, and Caragana korshinskii was investigated by using soil core method and the fine root was defined as root with diameter less than 2 mm. The soil moisture and soil properties were measured. The results showed that in the horizontal direction, the distribution of fine root biomass of P. tabuliformis presented a conic curve, and the fine root biomass of the other species expressed logarithm correlation. Radial roots developed, the fine root biomass were concentrated within the scope of the 2-3 times crown, indicating that trees extended their roots laterally to seek water farther from the tree. In the vertical direction, the fine root biomass decreased with the increasing soil depth. Fine root biomass had significant negative correlation with soil water content and bulk density, while significant positive correlation with organic matter and total N contents.

Molecular markers indicate different dynamics of leaves and roots during litter decomposition

NASA Astrophysics Data System (ADS)

Altmann, Jens; Jansen, Boris; Palviainen, Marjo; Kalbitz, Karsten

2010-05-01

Up to now there is only a poor understanding of the sources contributing to organic carbon in forest soils, especially the contribution of leaves and roots. Studies of the last 2 decades have shown that methods like pyrolysis and CuO oxidation are suitable tools to trace back the main contributors of organic matter in water, sediments and soils. Lignin derived monomers, extractable lipids, cutin and suberin derived compounds have been used frequently for identification of plant material. However, for the selection of suitable biomarker the decomposition patterns and stability of these compounds are of high importance but they are only poorly understood. In this study we focused on following questions: (I) Which compounds are characteristic to identify certain plant parts and plant species? (II) How stable are these compounds during the first 3 years of litter decomposition? We studied the chemical composition of samples from a 3-year litterbag decomposition experiment with roots and leaves of spruce, pine and birch which was done in Finland. Additionally to mass loss, carbon and nitrogen contents, free lipids were extracted; by alkaline hydrolysis non extractable lipids were gained. The extracts were analyzed afterwards by GC-MS, the insoluble residues were analyzed by curie-point Pyrolysis GC-MS. In addition to the identification and quantification of a variety of different compounds and compound ratios we used statistical classification methods to get deeper insights into the patterns of leaf and root-derived biomarkers during litter decomposition. The mass loss was largely different between the litter species and we always observed larger mass loss for leaf-derived litter in comparison to root derived litter. This trend was also observed by molecular analysis. The increase of the ratio of vanillic acid to vanillin was correlated to the mass loss of the samples over time. This shows that the degree of decomposition of plant material was linked with the degree of lignin degradation. Preliminary results show, that we were able to distinguish the different species and plant parts using various approaches, e.g., abundance and patterns of different substances and different ratios of compounds. The polyesters suberin and cutin were particularly useful to differentiate between roots and leaves. We conclude that knowledge of the decomposition patterns of molecular markers will largely improve the identification power of organic matter sources in soils.

Plant litter chemistry and mycorrhizal roots promote a nitrogen feedback in a temperate forest.

Treesearch

Nina Wurzburger; Ronald L. Hendrick

2009-01-01

1. Relationships between mycorrhizal plants and soil nitrogen (N) have led to the speculation that the chemistry of plant litter and the saprotrophy of mycorrhizal symbionts can function together to...

Does Short-term Litter Input Manipulation Affect Soil Respiration and the Carbon-isotopic Signature of Soil Respired CO2

NASA Astrophysics Data System (ADS)

Cheng, X.; Wu, J.

2016-12-01

Global change greatly alters the quality and quantity of plant litter inputs to soils, and further impacts soil organic matter (SOM) dynamics and soil respiration. However, the process-based understanding of how soil respiration may change with future shift in litter input is not fully understood. The Detritus Input and Removal Treatment (DIRT) experiment was conducted in coniferous forest (Platycladus orientalis (Linn.) Franco) ecosystem of central China to investigate the impact of above- and belowground litter input on soil respiration and the carbon-isotopic signature of soil respired CO2. Short-term (1-2 years) litter input manipulation significantly affected soil respiration, based on annual flux values, soil respiration was 31.9%, 20.5% and 37.2% lower in no litter (NL), no root (NR) and no input (NRNL), respectively, compared to control (CK). Whereas double litter (DL) treatment increased soil respiration by 9.1% compared to CK. The recalcitrance index of carbon (RIC) and the relative abundance of fungi increased under litter removal or root exclusion treatment (NL, NR and NRNL) compared to CK. Basal soil respiration was positively related to liable C and microbial biomass and negatively related to RIC and fungi to bacteria (F: B) ratio. The carbon-isotopic signature of soil respired CO2 enriched under litter removal and no input treatment, and slightly depleted under litter addition treatment compared to CK. Our results suggest that short-term litter input manipulation can affect the soil respiration by altering substrate availability and microbial community structure, and also impact the carbon-isotopic signature of soil respired CO2 possibly duo to change in the component of soil respiration and soil microclimate.

The relative importance of different grass components in controlling runoff and erosion on a hillslope under simulated rainfall

NASA Astrophysics Data System (ADS)

Li, Changjia; Pan, Chengzhong

2018-03-01

The effects of vegetation cover on overland flow and erosion processes on hillslopes vary with vegetation type and spatial distribution and the different vegetation components, including the above- and below-ground biomass. However, few attempts have been made to quantify how these factors affect erosion processes. Field experimental plots (5 m × 2 m) with a slope of approximately 25° were constructed and simulated rainfall (60 mm hr-1) (Rainfall) and simulated rainfall combined with upslope overland flow (20 L min-1) (Rainfall + Flow) were applied. Three grass species were planted, specifically Astragalus adsurgens (A. adsurgens), Medicago sativa (M. sativa) and Cosmos bipinnatus (C. bipinnatus). To isolate and quantify the relative contributions of the above-ground grass parts (stems, litter cover and leaves) and the roots to reducing surface runoff and erosion, each of the three grass species was subjected to three treatments: intact grass control (IG), no litter or leaves (only the grass stems and roots were reserved) (NLL), and only roots remaining (OR). The results showed that planting grass significantly reduced overland flow rate and velocity and sediment yield, and the mean reductions were 21.8%, 29.1% and 67.1%, respectively. M. sativa performed the best in controlling water and soil losses due to its thick canopy and dense, fine roots. Grasses reduced soil erosion mainly during the early stage of overland flow generation. The above-ground grass parts primarily contributed to reducing overland flow rate and velocity, with mean relative contributions of 64% and 86%, respectively. The roots played a predominant role in reducing soil erosion, with mean contribution of 84%. Due to the impact of upslope inflow, overland flow rate and velocity and sediment yield increased under the Rainfall + Flow conditions. The results suggest that grass species on downslope parts of semi-arid hillslopes performed better in reducing water and soil losses. This study is beneficial for forage selection, allocation and management practices, such as forage harvesting, when implementing restoration strategies to control soil and water losses.

Twenty Years of Litter and Root Manipulations: Insights into Multi-Decadal SOM Dynamics and Controls

NASA Astrophysics Data System (ADS)

Wig, J.; Lajtha, K.; Nadelhoffer, K. J.

2012-12-01

Reforestation, reducing deforestation, and sustainable forest management are often recommended by policy makers to mitigate the greenhouse gas contributions of the forestry sector. However, underlying many of these policy recommendations is the assumption that increasing above-ground carbon stocks corresponds to long-term increases in ecosystem carbon stocks, the majority of which is stored in soils. We analyzed soil carbon and nitrogen dynamics in forest soils that had undergone twenty years of continuous manipulations of above- and below-ground organic inputs as part of the Detritus Input and Removal Treatment (DIRT) network. Although we expected that increased C inputs would correspond to significantly elevated C in surface mineral soils, our data suggest that increasing above-ground litter inputs has had a positive priming effect in this soil. Positive priming occurs when increased rates of litter addition to soil lead to disproportionate increases in microbial respiration rates of native soil C, resulting in a net decrease of soil C. Soil respiration rates in a year-long laboratory incubation support this theory: increased above-ground litter inputs led to decreased respiration rates, suggesting a relative deficit of labile organic matter. Removal of below ground inputs, either with or without above-ground litter inputs, also led to decreased respiration in laboratory incubations, demonstrating the importance of fresh root inputs to labile C. Trends in non-hydrolyzable C fractions, a proxy for the more stable C pool, agree with our respiration measurements. Data from sequential density fractionation are consistent with the hypotheses that priming has occurred in response to increased above-ground litter inputs and that root inputs are an important control of the labile C pool. The importance of roots inputs for C stabilization is well documented in the literature, and our hypothesis that increased above-ground litter inputs leads to priming is supported by data from several other DIRT sites. These data indicate there is an important potential loss of ecosystem C due to priming which should be considered when changing organic inputs to the soil, as is the case in some sustainable forestry recommendations.

Fine Root Productivity and Dynamics on a Forested Floodplain in South Carolina

Treesearch

Terrell T. Baker; William Conner; H. B. Graeme Lockaby; John A. Stanturf

2001-01-01

The highly dynamic, fine root component of forested wetland ecosystems fine root dynamics is a challenging endeavor in any system, but the difficulties are particularly evident in forested floodplains where frequent hydrologic fluctuations directly influence fine root dynamics. Fine root (53 mm) biomass, production, and turnover were estimated for three soils...

A global Fine-Root Ecology Database to address below-ground challenges in plant ecology

DOE PAGES

Iversen, Colleen M.; McCormack, M. Luke; Powell, A. Shafer; ...

2017-02-28

Variation and tradeoffs within and among plant traits are increasingly being harnessed by empiricists and modelers to understand and predict ecosystem processes under changing environmental conditions. And while fine roots play an important role in ecosystem functioning, fine-root traits are underrepresented in global trait databases. This has hindered efforts to analyze fine-root trait variation and link it with plant function and environmental conditions at a global scale. This Viewpoint addresses the need for a centralized fine-root trait database, and introduces the Fine-Root Ecology Database (FRED, http://roots.ornl.gov) which so far includes > 70 000 observations encompassing a broad range of rootmore » traits and also includes associated environmental data. FRED represents a critical step toward improving our understanding of below-ground plant ecology. For example, FRED facilitates the quantification of variation in fine-root traits across root orders, species, biomes, and environmental gradients while also providing a platform for assessments of covariation among root, leaf, and wood traits, the role of fine roots in ecosystem functioning, and the representation of fine roots in terrestrial biosphere models. There has been a continued input of observations into FRED to fill gaps in trait coverage will improve our understanding of changes in fine-root traits across space and time.« less

A global Fine-Root Ecology Database to address below-ground challenges in plant ecology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iversen, Colleen M.; McCormack, M. Luke; Powell, A. Shafer

Variation and tradeoffs within and among plant traits are increasingly being harnessed by empiricists and modelers to understand and predict ecosystem processes under changing environmental conditions. And while fine roots play an important role in ecosystem functioning, fine-root traits are underrepresented in global trait databases. This has hindered efforts to analyze fine-root trait variation and link it with plant function and environmental conditions at a global scale. This Viewpoint addresses the need for a centralized fine-root trait database, and introduces the Fine-Root Ecology Database (FRED, http://roots.ornl.gov) which so far includes > 70 000 observations encompassing a broad range of rootmore » traits and also includes associated environmental data. FRED represents a critical step toward improving our understanding of below-ground plant ecology. For example, FRED facilitates the quantification of variation in fine-root traits across root orders, species, biomes, and environmental gradients while also providing a platform for assessments of covariation among root, leaf, and wood traits, the role of fine roots in ecosystem functioning, and the representation of fine roots in terrestrial biosphere models. There has been a continued input of observations into FRED to fill gaps in trait coverage will improve our understanding of changes in fine-root traits across space and time.« less

[Fine root dynamics and its relationship with soil fertility in tropical rainforests of Chocó].

PubMed

Quinto, Harley; Caicedo, Haylin; Thelis Perez, May; Moreno, Flavio

2016-12-01

The fine roots play an important role in the acquisition of water and minerals from the soil, the global carbon balance and mitigation of climate change. The dynamics (productivity and turnover) of fine roots is essential for nutrient cycling and carbon balance of forest ecosystems. The availability of soil water and nutrients has significantly determined the productivity and turnover of fine roots. It has been hypothesized that fine roots dynamics increases with the availability of soil resources in tropical forest ecosystems. To test this hypothesis in tropical rainforests of Chocó (ecosystems with the highest rainfall in the world), five one-ha permanent plots were established in the localities of Opogodó and Pacurita, where the productivity and turnover of fine roots were measured at 0-10 cm and 10-20 cm depth. The measurement of the fine root production was realized by the Ingrowth core method. The fine root turnover was measured like fine roots production divided mean annual biomass. In addition, soil fertility parameters (pH, nutrients, and texture) were measured and their association with productivity and turnover of fine roots was evaluated. It was found that the sites had nutrient-poor soils. The localities also differ in soil; Opogodó has sandy soils and flat topography, and Pacurita has clay soils, rich in aluminum and mountainous topography. In Opogodó fine root production was 6.50 ± 2.62 t/ha.yr (mean ± SD). In Pacurita, fine root production was 3.61 ± 0.88 t/ha.yr. Also in Opogodó, the fine root turnover was higher than in Pacurita (1.17 /y and 0.62 /y, respectively). Fine root turnover and production in the upper soil layers (10 cm upper soil) was considerably higher. Productivity and turnover of fine roots showed positive correlation with pH and contents of organic matter, total N, K, Mg, and sand; whereas correlations were negative with ECEC and contents of Al, silt, and clay. The percentage of sand was the parameter that best explained the variations of fine root production. The fine root turnover was negatively explained by soil Al availability. Results suggested the increase of fine root dynamics with soil fertility at a local scale, which also indicates that under the oligotrophic conditions of soils in tropical rainforests, fine roots tend to proliferate rapidly in small patches of soil rich in sand and nutrients.

A global Fine-Root Ecology Database to address below-ground challenges in plant ecology.

PubMed

Iversen, Colleen M; McCormack, M Luke; Powell, A Shafer; Blackwood, Christopher B; Freschet, Grégoire T; Kattge, Jens; Roumet, Catherine; Stover, Daniel B; Soudzilovskaia, Nadejda A; Valverde-Barrantes, Oscar J; van Bodegom, Peter M; Violle, Cyrille

2017-07-01

Variation and tradeoffs within and among plant traits are increasingly being harnessed by empiricists and modelers to understand and predict ecosystem processes under changing environmental conditions. While fine roots play an important role in ecosystem functioning, fine-root traits are underrepresented in global trait databases. This has hindered efforts to analyze fine-root trait variation and link it with plant function and environmental conditions at a global scale. This Viewpoint addresses the need for a centralized fine-root trait database, and introduces the Fine-Root Ecology Database (FRED, http://roots.ornl.gov) which so far includes > 70 000 observations encompassing a broad range of root traits and also includes associated environmental data. FRED represents a critical step toward improving our understanding of below-ground plant ecology. For example, FRED facilitates the quantification of variation in fine-root traits across root orders, species, biomes, and environmental gradients while also providing a platform for assessments of covariation among root, leaf, and wood traits, the role of fine roots in ecosystem functioning, and the representation of fine roots in terrestrial biosphere models. Continued input of observations into FRED to fill gaps in trait coverage will improve our understanding of changes in fine-root traits across space and time. © 2017 UT-Battelle LLC. New Phytologist © 2017 New Phytologist Trust.

Response of the Fine Root Production, Phenology, and Turnover Rate of Six Shrub Species from a Subtropical Forest to a Soil Moisture Gradient and Shading

NASA Astrophysics Data System (ADS)

Fu, X.; Dai, X.; Wang, H.

2015-12-01

Knowledge of the fine root dynamics of different life forms in forest ecosystems is critical to understanding how the overall belowground carbon cycling is affected by climate change. However, our current knowledge regarding how endogenous or exogenous factors regulate the root dynamics of understory vegetation is limited. We selected a suite of study sites representing different habitats with gradients of soil moisture and solar radiation (shading or no shading). We assessed the fine root production phenology, the total fine root production, and the turnover among six understory shrub species in a subtropical climate, and examined the responses of the fine root dynamics to gradients in the soil moisture and solar radiation. The shrubs included three evergreen species, Loropetalum chinense, Vaccinium bracteatum, and Adinandra millettii, and three deciduous species, Serissa serissoides, Rubus corchorifolius, and Lespedeza davidii. We observed that variations in the annual fine root production and turnover among species were significant in the deciduous group but not in the evergreen group. Notably, V. bracteatum and S. serissoides presented the greatest responses in terms of root phenology to gradients in the soil moisture and shading: high-moisture habitat led to a decrease and shade led to an increase in fine root production during spring. Species with smaller fine roots of the 1st+2nd-order diameter presented more sensitive responses in terms of fine root phenology to a soil moisture gradient. Species with a higher fine root nitrogen-to -carbon ratio exhibited more sensitive responses in terms of fine root annual production to shading. Soil moisture and shading did not change the annual fine root production as much as the turnover rate. The fine root dynamics of some understory shrubs varied significantly with soil moisture and solar radiation status and may be different from tree species. Our results emphasize the need to study the understory fine root dynamics in the achievement of a complete understanding of the overall belowground carbon cycling in a forest ecosystem, particularly ecosystems in which the understory fine root highly contributes to the belowground biomass.

Slopewash, surface runoff and fine-litter transport in forest and landslide scars in humid-tropical steeplands, Luquillo Experimental Forest, Puerto Rico

USGS Publications Warehouse

Larsen, M.C.; Torres-Sanchez, A. J.; Concepcion, I.M.

1999-01-01

Rainfall, slopewash (the erosion of soil particles), surface runoff and fine-litter transport at humid-tropical steepland sites in the Luquillo Experimental Forest, Puerto Rico (18??20' N, 65??45' W) were measured from 1991 to 1995. Hillslopes underlain by (1) Cretaceous tuffaceous sandstone and siltstone in subtropical rain (tabonuco) forest with vegetation recovering from Hurricane Hugo (1989), and (2) Tertiary quartz diorite in subtropical lower montane wet (colorado and dwarf) forest with undisturbed forest canopy were compared to recent landslide scars. Monthly surface runoff on these very steep hillslopes (24??to 43??) was only 0.2 to 0.5 per cent of monthly rainfall. Slopewash was higher in sandy loam soils whose parent material is quartz diorite (averaging 46 g m-2 a-1) than in silty clay loam soils derived from tuffaceous sandstone and siltstone where the average was 9 g m-2 a-1. Annual slopewash of 100 to 349 g m-2 on the surfaces of two recent, small landslide scars was measured initially but slopewash decreased to only 3 to 4 g m-2 a-1 by the end of the study. The mean annual mass of fine litter (mainly leaves and twigs) transported downslope at the forested sites ranged from 5 to 8 g m-2 and was lower at the tabonuco forest site, where post-Hurricane Hugo recovery is still in progress. Mean annual fine-litter transport was 2.5 g m-2 on the two landslide scars.

Fine root morphological traits determine variation in root respiration of Quercus serrata.

PubMed

Makita, Naoki; Hirano, Yasuhiro; Dannoura, Masako; Kominami, Yuji; Mizoguchi, Takeo; Ishii, Hiroaki; Kanazawa, Yoichi

2009-04-01

Fine root respiration is a significant component of carbon cycling in forest ecosystems. Although fine roots differ functionally from coarse roots, these root types have been distinguished based on arbitrary diameter cut-offs (e.g., 2 or 5 mm). Fine root morphology is directly related to physiological function, but few attempts have been made to understand the relationships between morphology and respiration of fine roots. To examine relationships between respiration rates and morphological traits of fine roots (0.15-1.4 mm in diameter) of mature Quercus serrata Murr., we measured respiration of small fine root segments in the field with a portable closed static chamber system. We found a significant power relationship between mean root diameter and respiration rate. Respiration rates of roots<0.4 mm in mean diameter were high and variable, ranging from 3.8 to 11.3 nmol CO2 g(-1) s(-1), compared with those of larger diameter roots (0.4-1.4 mm), which ranged from 1.8 to 3.0 nmol CO2 g(-1) s(-1). Fine root respiration rate was positively correlated with specific root length (SRL) as well as with root nitrogen (N) concentration. For roots<0.4 mm in diameter, SRL had a wider range (11.3-80.4 m g(-1)) and was more strongly correlated with respiration rate than diameter. Our results indicate that a more detailed classification of fine roots<2.0 mm is needed to represent the heterogeneity of root respiration and to evaluate root biomass and root morphological traits.

Effects of Inundation, Nutrient Availability and Plant Species Diversity on Fine Root Mass and Morphology Across a Saltmarsh Flooding Gradient

PubMed Central

Redelstein, Regine; Dinter, Thomas; Hertel, Dietrich; Leuschner, Christoph

2018-01-01

Saltmarsh plants are exposed to multiple stresses including tidal inundation, salinity, wave action and sediment anoxia, which require specific root system adaptations to secure sufficient resource capture and firm anchorage in a temporary toxic environment. It is well known that many saltmarsh species develop large below-ground biomass (roots and rhizomes) but relations between fine roots, in particular, and the abiotic conditions in salt marshes are widely unknown. We studied fine root mass (<2 mm in diameter), fine root depth distribution and fine root morphology in three typical communities (Spartina anglica-dominated pioneer zone, Atriplex portulacoides-dominated lower marsh, Elytrigia atherica-dominated upper marsh) across elevational gradients in two tidal salt marshes of the German North Sea coast [a mostly sandy marsh on a barrier island (Spiekeroog), and a silty-clayey marsh on the mainland coast (Westerhever)]. Fine root mass in the 0–40 cm profile ranged between 750 and 2,500 g m−2 in all plots with maxima at both sites in the lower marsh with intermediate inundation frequency and highest plant species richness indicating an effect of biodiversity on fine root mass. Fine root mass and, even more, total fine root surface area (maximum 340 m2 m−2) were high compared to terrestrial grasslands, and were greater in the nutrient-poorer Spiekeroog marsh. Fine root density showed only a slight or no decrease toward 40 cm depth. We conclude that the standing fine root mass and morphology of these salt marshes is mainly under control of species identity and nutrient availability, but species richness is especially influential. The plants of the pioneer zone and lower marsh possess well adapted fine roots and large standing root masses despite the often water-saturated sediment. PMID:29467778

Herbivore-mediated material fluxes in a northern deciduous forest under elevated carbon dioxide and ozone concentrations.

PubMed

Meehan, Timothy D; Couture, John J; Bennett, Alison E; Lindroth, Richard L

2014-10-01

Anthropogenic changes in atmospheric carbon dioxide (CO2 ) and ozone (O3 ) are known to alter tree physiology and growth, but the cascading effects on herbivore communities and herbivore-mediated nutrient cycling are poorly understood. We sampled herbivore frass, herbivore-mediated greenfall, and leaf-litter deposition in temperate forest stands under elevated CO2 (c. 560 ppm) and O3 (c. 1.5× ambient), analyzed substrate chemical composition, and compared the quality and quantity of fluxes under multiple atmospheric treatments. Leaf-chewing herbivores fluxed 6.2 g m(-2)  yr(-1) of frass and greenfall from the canopy to the forest floor, with a carbon : nitrogen (C : N) ratio 32% lower than that of leaf litter. Herbivore fluxes of dry matter, C, condensed tannins, and N increased under elevated CO2 (35, 32, 63 and 39%, respectively), while fluxes of N decreased (18%) under elevated O3 . Herbivore-mediated dry matter inputs scaled across atmospheric treatments as a constant proportion of leaf-litter inputs. Increased fluxes under elevated CO2 were consistent with increased herbivore consumption and abundance, and with increased plant growth and soil respiration, previously reported for this experimental site. Results suggest that insect herbivory will reinforce other factors, such as photosynthetic rate and fine-root production, impacting C sequestration by forests in future environments. © 2014 The Authors New Phytologist © 2014 New Phytologist Trust.

Fate of leaf-litter N in forest and grassland along a pedo-climatic gradient in south-western Siberia: an in situ 15N-labelling experiment

NASA Astrophysics Data System (ADS)

Brédoire, Félix; Zeller, Bernd; Nikitich, Polina; Barsukov, Pavel A.; Rusalimova, Olga; Bakker, Mark R.; Legout, Arnaud; Bashuk, Alexander; Kayler, Zachary E.; Derrien, Delphine

2017-04-01

The suitability of Siberia for agriculture is expected to increase in the next decades due to strong and rapid climatic changes, but little is known on the environmental drivers of soil fertility there, especially nitrogen (N). Plant-available N is mainly derived from litter decomposition. South-western (SW) Siberia is located on the transition between several bioclimatic zones that are predicted to shift and extend along with climate change (steppe, forest-steppe, sub-taiga). The soils of this region are formed on a common loess deposit but they are submitted to different climatic conditions and vegetation cover. In the south of the region, typically in steppe/forest-steppe, soil freezes over winter because of a relatively shallow snow-pack, and water shortages are frequent in summer. In the north, typically in sub-taiga, the soil is barely frozen in winter due to a thick snow-pack and sufficient soil moisture in summer. In this study, we characterized the dynamics of leaf litter decomposition and the transfer of N from leaf litter to the soil and back to plants. Four sites were chosen along a climate gradient (temperature, precipitation and snow depth). At each site, we applied 15N-labelled leaf litter on the soil surface in experimental plots in an aspen (Populus tremula L.) forest and in a grassland. Twice a year during three years, we tracked the 15N derived from the decomposing labelled-litter in the organic layers, in the first 15 cm of the soil, and in above-ground vegetation. Soil temperature and moisture were monitored at a daily timestep over three years and soil water budgets were simulated (BILJOU model, Granier et al. 1999). We observed contrasting patterns in the fate of litter-derived 15N between bioclimatic zones. Over three years, along with faster decay rates, the release of leaf litter-N was faster in sub-taiga than in forest-steppe. As such, higher quantities of 15N were transferred into the soil in sub-taiga. The transfer was also deeper there, which might be related to a more intense drainage because of higher snow levels, as inferred from soil water budget modelling. Interestingly, this higher drainage seems to induce only a small loss of N from the system. Such retention could result from soil physico-chemical properties (higher fine silt and oxides contents) enhancing soil organic matter stabilization, and/or by the immobilization of N in microbial metabolites. We observed differing N dynamics between forest and grassland that can be related to the different chemical composition of initial litter (tree leaves vs. grasses) and plant-soil interactions. In general, N was retained in the first centimeters of the mineral soil in grassland while the transfer was deeper in the forest soils. As fine root exploration is denser in grassland topsoil than in forest topsoil, we infer that an efficient uptake of N by grasses in the first soil layers limits N migration down the profile. It is also possible that grasses are active earlier in the season than trees and understorey species, i.e. at snow-melt when drainage is the most intense.

Disentangling the root- and detritus-based food chain in the micro-food web of an arable soil by plant removal

PubMed Central

Glavatska, Olena; Müller, Karolin; Butenschoen, Olaf; Schmalwasser, Andreas; Kandeler, Ellen; Scheu, Stefan; Totsche, Kai Uwe

2017-01-01

Soil food web structure and function is primarily determined by the major basal resources, which are living plant tissue, root exudates and dead organic matter. A field experiment was performed to disentangle the interlinkage of the root-and detritus-based soil food chains. An arable site was cropped either with maize, amended with maize shoot litter or remained bare soil, representing food webs depending on roots, aboveground litter and soil organic matter as predominant resource, respectively. The soil micro-food web, i.e. microorganisms and nematodes, was investigated in two successive years along a depth transect. The community composition of nematodes was used as model to determine the changes in the rhizosphere, detritusphere and bulk soil food web. In the first growing season the impact of treatments on the soil micro-food web was minor. In the second year plant-feeding nematodes increased under maize, whereas after harvest the Channel Index assigned promotion of the detritivore food chain, reflecting decomposition of root residues. The amendment with litter did not foster microorganisms, instead biomass of Gram-positive and Gram-negative bacteria as well as that of fungi declined in the rooted zone. Likely higher grazing pressure by nematodes reduced microbial standing crop as bacterial and fungal feeders increased. However, populations at higher trophic levels were not promoted, indicating limited flux of litter resources along the food chain. After two years of bare soil microbial biomass and nematode density remained stable, pointing to soil organic matter-based resources that allow bridging periods with deprivation. Nematode communities were dominated by opportunistic taxa that are competitive at moderate resource supply. In sum, removal of plants from the system had less severe effects than expected, suggesting considerable food web resilience to the disruption of both the root and detrital carbon channel, pointing to a legacy of organic matter resources in arable soils. PMID:28704438

Disentangling the root- and detritus-based food chain in the micro-food web of an arable soil by plant removal.

PubMed

Glavatska, Olena; Müller, Karolin; Butenschoen, Olaf; Schmalwasser, Andreas; Kandeler, Ellen; Scheu, Stefan; Totsche, Kai Uwe; Ruess, Liliane

2017-01-01

Soil food web structure and function is primarily determined by the major basal resources, which are living plant tissue, root exudates and dead organic matter. A field experiment was performed to disentangle the interlinkage of the root-and detritus-based soil food chains. An arable site was cropped either with maize, amended with maize shoot litter or remained bare soil, representing food webs depending on roots, aboveground litter and soil organic matter as predominant resource, respectively. The soil micro-food web, i.e. microorganisms and nematodes, was investigated in two successive years along a depth transect. The community composition of nematodes was used as model to determine the changes in the rhizosphere, detritusphere and bulk soil food web. In the first growing season the impact of treatments on the soil micro-food web was minor. In the second year plant-feeding nematodes increased under maize, whereas after harvest the Channel Index assigned promotion of the detritivore food chain, reflecting decomposition of root residues. The amendment with litter did not foster microorganisms, instead biomass of Gram-positive and Gram-negative bacteria as well as that of fungi declined in the rooted zone. Likely higher grazing pressure by nematodes reduced microbial standing crop as bacterial and fungal feeders increased. However, populations at higher trophic levels were not promoted, indicating limited flux of litter resources along the food chain. After two years of bare soil microbial biomass and nematode density remained stable, pointing to soil organic matter-based resources that allow bridging periods with deprivation. Nematode communities were dominated by opportunistic taxa that are competitive at moderate resource supply. In sum, removal of plants from the system had less severe effects than expected, suggesting considerable food web resilience to the disruption of both the root and detrital carbon channel, pointing to a legacy of organic matter resources in arable soils.

Fine Root Abundance and Dynamics of Stone Pine (Pinus cembra) at the Alpine Treeline Is Not Impaired by Self-shading.

PubMed

Kubisch, Petra; Leuschner, Christoph; Coners, Heinz; Gruber, Andreas; Hertel, Dietrich

2017-01-01

Low temperatures are crucial for the formation of the alpine treeline worldwide. Since soil temperature in the shade of tree canopies is lower than in open sites, it was assumed that self-shading may impair the trees' root growth performance. While experiments with tree saplings demonstrate root growth impairment at soil temperatures below 5-7°C, field studies exploring the soil temperature - root growth relationship at the treeline are missing. We recorded soil temperature and fine root abundance and dynamics in shaded and sun-exposed areas under canopies of isolated Pinus cembra trees at the alpine treeline. In contrast to the mentioned assumption, we found more fine root biomass and higher fine root growth in colder than in warmer soil areas. Moreover, colder areas showed higher fine root turnover and thus lower root lifespan than warmer places. We conclude that P. cembra balances enhanced fine root mortality in cold soils with higher fine root activity and by maintaining higher fine root biomass, most likely as a response to shortage in soil resource supply. The results from our study highlight the importance of in situ measurements on mature trees to understand the fine root response and carbon allocation pattern to the thermal growth conditions at the alpine treeline.

Fine root biomass in relation to site and stand characteristics in Norway spruce and Scots pine stands.

PubMed

Helmisaari, Heljä-Sisko; Derome, John; Nöjd, Pekka; Kukkola, Mikko

2007-10-01

Variations in fine root biomass of trees and understory in 16 stands throughout Finland were examined and relationships to site and stand characteristics determined. Norway spruce fine root biomass varied between 184 and 370 g m(-2), and that of Scots pine ranged between 149 and 386 g m(-2). In northern Finland, understory roots and rhizomes (< 2 mm diameter) accounted for up to 50% of the stand total fine root biomass. Therefore, the fine root biomass of trees plus understory was larger in northern Finland in stands of both tree species, resulting in a negative relationship between fine root biomass and the temperature sum and a positive relationship between fine root biomass and the carbon:nitrogen ratio of the soil organic layer. The foliage:fine root ratio varied between 2.1 and 6.4 for Norway spruce and between 0.8 and 2.2 for Scots pine. The ratio decreased for both Norway spruce and Scots pine from south to north, as well as from fertile to more infertile site types. The foliage:fine root ratio of Norway spruce was related to basal area and stem surface area. The strong positive correlations of these three parameters with fine root nitrogen concentration implies that more fine roots are needed to maintain a certain amount of foliage when nutrient availability is low. No significant relationships were found between stand parameters and fine root biomass at the stand level, but the relationships considerably improved when both fine root biomass and stand parameters were calculated for the mean tree in the stand. When the northern and southern sites were analyzed separately, fine root biomass per tree of both species was significantly correlated with basal area and stem surface area per tree. Basal area, stem surface area and stand density can be estimated accurately and easily. Thus, our results may have value in predicting fine root biomass at the tree and stand level in boreal Norway spruce and Scots pine forests.

Effects of experimental throughfall reduction and soil warming on fine root biomass and its decomposition in a warm temperate oak forest.

PubMed

Liu, Yanchun; Liu, Shirong; Wan, Shiqiang; Wang, Jingxin; Wang, Hui; Liu, Kuan

2017-01-01

Fine root dynamics play a critical role in regulating carbon (C) cycling in terrestrial ecosystems. Examining responses of fine root biomass and its decomposition to altered precipitation pattern and climate warming is crucial to understand terrestrial C dynamics and its feedback to climate change. Fine root biomass and its decomposition rate were investigated in a warm temperate oak forest through a field manipulation experiment with throughfall reduction and soil warming conducted. Throughfall reduction significantly interacted with soil warming in affecting fine root biomass and its decomposition. Throughfall reduction substantially increased fine root biomass and its decomposition in unheated plots, but negative effects occurred in warmed plots. Soil warming significantly enhanced fine root biomass and its decomposition under ambient precipitation, but the opposite effects exhibited under throughfall reduction. Different responses in fine root biomass among different treatments could be largely attributed to soil total nitrogen (N), while fine root decomposition rate was more depended on microbial biomass C and N. Our observations indicate that decreased precipitation may offset the positive effect of soil warming on fine root biomass and decomposition. Copyright © 2016 Elsevier B.V. All rights reserved.

[Effects of tree species diversity on fine-root biomass and morphological characteristics in subtropical Castanopsis carlesii forests].

PubMed

Wang, Wei-Wei; Huang, Jin-Xue; Chen, Feng; Xiong, De-Cheng; Lu, Zheng-Li; Huang, Chao-Chao; Yang, Zhi-Jie; Chen, Guang-Shui

2014-02-01

Fine roots in the Castanopsis carlesii plantation forest (MZ), the secondary forest of C. carlesii through natural regeneration with anthropogenic promotion (AR), and the secondary forest of C. carlesii through natural regeneration (NR) in Sanming City, Fujian Province, were estimated by soil core method to determine the influence of tree species diversity on biomass, vertical distribution and morphological characteristics of fine roots. The results showed that fine root biomass for the 0-80 cm soil layer in the MZ, AR and NR were (182.46 +/- 10.81), (242.73 +/- 17.85) and (353.11 +/- 16.46) g x m(-2), respectively, showing an increased tendency with increasing tree species diversity. In the three forests, fine root biomass was significantly influenced by soil depth, and fine roots at the 0-10 cm soil layer accounted for more than 35% of the total fine root biomass. However, the interaction of stand type and soil depth on fine-root distribution was not significant, indicating no influence of tree species diversity on spatial niche segregation in fine roots. Root surface area density and root length density were the highest in NR and lowest in the MZ. Specific root length was in the order of AR > MZ > NR, while specific root surface area was in the order of NR > MZ > AR. There was no significant interaction of stand type and soil depth on specific root length and specific root surface area. Fine root morphological plasticity at the stand level had no significant response to tree species diversity.

The Automated Root Exudate System (ARES): a method to apply solutes at regular intervals to soils in the field.

PubMed

Lopez-Sangil, Luis; George, Charles; Medina-Barcenas, Eduardo; Birkett, Ali J; Baxendale, Catherine; Bréchet, Laëtitia M; Estradera-Gumbau, Eduard; Sayer, Emma J

2017-09-01

Root exudation is a key component of nutrient and carbon dynamics in terrestrial ecosystems. Exudation rates vary widely by plant species and environmental conditions, but our understanding of how root exudates affect soil functioning is incomplete, in part because there are few viable methods to manipulate root exudates in situ . To address this, we devised the Automated Root Exudate System (ARES), which simulates increased root exudation by applying small amounts of labile solutes at regular intervals in the field.The ARES is a gravity-fed drip irrigation system comprising a reservoir bottle connected via a timer to a micro-hose irrigation grid covering c . 1 m 2 ; 24 drip-tips are inserted into the soil to 4-cm depth to apply solutions into the rooting zone. We installed two ARES subplots within existing litter removal and control plots in a temperate deciduous woodland. We applied either an artificial root exudate solution (RE) or a procedural control solution (CP) to each subplot for 1 min day -1 during two growing seasons. To investigate the influence of root exudation on soil carbon dynamics, we measured soil respiration monthly and soil microbial biomass at the end of each growing season.The ARES applied the solutions at a rate of c . 2 L m -2  week -1 without significantly increasing soil water content. The application of RE solution had a clear effect on soil carbon dynamics, but the response varied by litter treatment. Across two growing seasons, soil respiration was 25% higher in RE compared to CP subplots in the litter removal treatment, but not in the control plots. By contrast, we observed a significant increase in microbial biomass carbon (33%) and nitrogen (26%) in RE subplots in the control litter treatment.The ARES is an effective, low-cost method to apply experimental solutions directly into the rooting zone in the field. The installation of the systems entails minimal disturbance to the soil and little maintenance is required. Although we used ARES to apply root exudate solution, the method can be used to apply many other treatments involving solute inputs at regular intervals in a wide range of ecosystems.

[Effects of soil warming on specific respiration rate and non-structural carbohydrate concentration in fine roots of Chinese fir seedlings].

PubMed

Song, Tao Tao; Chen, Guang Shui; Shi, Shun Zeng; Guo, Run Quan; Zheng, Xin; Xiong, De Cheng; Chen, Wang Yuan; Chen, Ting Ting

2018-03-01

A field mesocosm experiment with Chinese fir (Cunninghamia lanceolata) seedlings was conducted in Chenda State-Owned Forest Farm, Sanming, Fujian Province. The effects of soil warming (ambient +5 ℃) on specific respiration rates and nonstructural carbohydrate (NSC) concentrations in fine roots were measured by the ingrowth core method, to reveal the belowground responses and the adaptability of Chinese fir to global warming. The results showed that soil warming caused significant changes of fine root NSC in the second year. The NSC and starch concentrations in 0-1 mm fine roots, and the NSC and sugar concentrations in 1-2 mm fine roots decreased signifi-cantly in January. The NSC, sugar and starch concentrations in 0-1 mm roots and the starch concentration in 1-2 mm roots increased in July. Soil warming had no significant effect on fine root NSC in the third year. The specific root respiration rate of the 0-1 mm roots significantly increased in July of the second year but significantly decreased in July of the third year in the warmed plots. Compared with the 0-1 mm roots, soil warming had no significant effect on the specific root respiration rate of the 1-2 mm roots. In conclusion, the responses of fine root respiration to soil warming depended on the duration of warming. Fine root respiration partly acclimated to soil warming with increasing duration of soil warming, which kept fine root NSC being relatively stable.

The influence of tree species on small scale spatial heterogeneity of soil respiration in a temperate mixed forest.

PubMed

Li, Weibin; Bai, Zhen; Jin, Changjie; Zhang, Xinzhong; Guan, Dexin; Wang, Anzhi; Yuan, Fenghui; Wu, Jiabing

2017-07-15

Soil respiration is the largest terrestrial carbon flux into the atmosphere, and different tree species could directly influence root derived respiration and indirectly regulate soil respiration rates by altering soil chemical and microbial properties. In this study, we assessed the small scale spatial heterogeneity of soil respiration and the microbial community below the canopy of three dominant tree species (Korean pine (Pinus koraiensis), Mongolian oak (Quercus mongolica), and Manchuria ash (Fraxinus mandshurica)) in a temperate mixed forest in Northeast China. Soil respiration differed significantly during several months and increased in the order of oak

Fine Root Abundance and Dynamics of Stone Pine (Pinus cembra) at the Alpine Treeline Is Not Impaired by Self-shading

PubMed Central

Kubisch, Petra; Leuschner, Christoph; Coners, Heinz; Gruber, Andreas; Hertel, Dietrich

2017-01-01

Low temperatures are crucial for the formation of the alpine treeline worldwide. Since soil temperature in the shade of tree canopies is lower than in open sites, it was assumed that self-shading may impair the trees’ root growth performance. While experiments with tree saplings demonstrate root growth impairment at soil temperatures below 5–7°C, field studies exploring the soil temperature – root growth relationship at the treeline are missing. We recorded soil temperature and fine root abundance and dynamics in shaded and sun-exposed areas under canopies of isolated Pinus cembra trees at the alpine treeline. In contrast to the mentioned assumption, we found more fine root biomass and higher fine root growth in colder than in warmer soil areas. Moreover, colder areas showed higher fine root turnover and thus lower root lifespan than warmer places. We conclude that P. cembra balances enhanced fine root mortality in cold soils with higher fine root activity and by maintaining higher fine root biomass, most likely as a response to shortage in soil resource supply. The results from our study highlight the importance of in situ measurements on mature trees to understand the fine root response and carbon allocation pattern to the thermal growth conditions at the alpine treeline. PMID:28469633

Comparison of broiler litter and commercial fertilizer at equivalent N rates on soil quality

USDA-ARS?s Scientific Manuscript database

A 3-year study was conducted to determine the effects of variable rates of broiler litter relative to inorganic fertilizer at equivalent N rates on soil nutrient content and quality in an upland Granada silt loam (fine-silty, mixed, active, Thermic, Fraglossudalfs) soil. Treatments included annual b...

Broiler litter x industrial by-products reduce nutrients and microbial losses in surface runoff when applied to forages

USDA-ARS?s Scientific Manuscript database

Rainfall simulations were used to determine the effect of broiler litter (BL) treated with N and P immobilizing agents on nutrient losses from a bermudagrass (Cynodon doctylon) hayfield on Marietta silt loam (Fine-loamy, siliceous, active, thermic Fluvaquentic Eutrudepts). The experimental design w...

Climate, soil and plant functional types as drivers of global fine-root trait variation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Freschet, Grégoire T.; Valverde-Barrantes, Oscar J.; Tucker, Caroline M.

Ecosystem functioning relies heavily on below-ground processes, which are largely regulated by plant fine-roots and their functional traits. However, our knowledge of fine-root trait distribution relies to date on local- and regional-scale studies with limited numbers of species, growth forms and environmental variation. We compiled a world-wide fine-root trait dataset, featuring 1115 species from contrasting climatic areas, phylogeny and growth forms to test a series of hypotheses pertaining to the influence of plant functional types, soil and climate variables, and the degree of manipulation of plant growing conditions on species fine-root trait variation. Most particularly, we tested the competing hypothesesmore » that fine-root traits typical of faster return on investment would be most strongly associated with conditions of limiting versus favourable soil resource availability. We accounted for both data source and species phylogenetic relatedness. We demonstrate that: (i) Climate conditions promoting soil fertility relate negatively to fine-root traits favouring fast soil resource acquisition, with a particularly strong positive effect of temperature on fine-root diameter and negative effect on specific root length (SRL), and a negative effect of rainfall on root nitrogen concentration; (ii) Soil bulk density strongly influences species fine-root morphology, by favouring thicker, denser fine-roots; (iii) Fine-roots from herbaceous species are on average finer and have higher SRL than those of woody species, and N 2-fixing capacity positively relates to root nitrogen; and (iv) Plants growing in pots have higher SRL than those grown in the field. Synthesis. This study reveals both the large variation in fine-root traits encountered globally and the relevance of several key plant functional types and soil and climate variables for explaining a substantial part of this variation. Climate, particularly temperature, and plant functional types were the two strongest predictors of fine-root trait variation. High trait variation occurred at local scales, suggesting that wide-ranging below-ground resource economics strategies are viable within most climatic areas and soil conditions.« less

Climate, soil and plant functional types as drivers of global fine-root trait variation

DOE PAGES

Freschet, Grégoire T.; Valverde-Barrantes, Oscar J.; Tucker, Caroline M.; ...

2017-03-08

Ecosystem functioning relies heavily on below-ground processes, which are largely regulated by plant fine-roots and their functional traits. However, our knowledge of fine-root trait distribution relies to date on local- and regional-scale studies with limited numbers of species, growth forms and environmental variation. We compiled a world-wide fine-root trait dataset, featuring 1115 species from contrasting climatic areas, phylogeny and growth forms to test a series of hypotheses pertaining to the influence of plant functional types, soil and climate variables, and the degree of manipulation of plant growing conditions on species fine-root trait variation. Most particularly, we tested the competing hypothesesmore » that fine-root traits typical of faster return on investment would be most strongly associated with conditions of limiting versus favourable soil resource availability. We accounted for both data source and species phylogenetic relatedness. We demonstrate that: (i) Climate conditions promoting soil fertility relate negatively to fine-root traits favouring fast soil resource acquisition, with a particularly strong positive effect of temperature on fine-root diameter and negative effect on specific root length (SRL), and a negative effect of rainfall on root nitrogen concentration; (ii) Soil bulk density strongly influences species fine-root morphology, by favouring thicker, denser fine-roots; (iii) Fine-roots from herbaceous species are on average finer and have higher SRL than those of woody species, and N 2-fixing capacity positively relates to root nitrogen; and (iv) Plants growing in pots have higher SRL than those grown in the field. Synthesis. This study reveals both the large variation in fine-root traits encountered globally and the relevance of several key plant functional types and soil and climate variables for explaining a substantial part of this variation. Climate, particularly temperature, and plant functional types were the two strongest predictors of fine-root trait variation. High trait variation occurred at local scales, suggesting that wide-ranging below-ground resource economics strategies are viable within most climatic areas and soil conditions.« less

Fine root dynamics and trace gas fluxes in two lowland tropical forest soils.

Treesearch

WHENDEE L. SILVER; ANDREW W. THOMPSON; MEGAN E . MCGRODDY; RUTH K. VARNER; JADSON D. DIAS; HUDSON SILVA; CRILL PATRICK M.; MICHAEL KELLER

2005-01-01

Fine root dynamics have the potential to contribute significantly to ecosystem-scale biogeochemical cycling, including the production and emission of greenhouse gases. This is particularly true in tropical forests which are often characterized as having large fine root biomass and rapid rates of root production and decomposition. We examined patterns in fine root...

Quantifying the effect of plant growth on litter decomposition using a novel, triple-isotope label approach

NASA Astrophysics Data System (ADS)

Ernakovich, J. G.; Baldock, J.; Carter, T.; Davis, R. A.; Kalbitz, K.; Sanderman, J.; Farrell, M.

2017-12-01

Microbial degradation of plant detritus is now accepted as a major stabilizing process of organic matter in soils. Most of our understanding of the dynamics of decomposition come from laboratory litter decay studies in the absence of plants, despite the fact that litter decays in the presence of plants in many native and managed systems. There is growing evidence that living plants significantly impact the degradation and stabilization of litter carbon (C) due to changes in the chemical and physical nature of soils in the rhizosphere. For example, mechanistic studies have observed stimulatory effects of root exudates on litter decomposition, and greenhouse studies have shown that living plants accelerate detrital decay. Despite this, we lack a quantitative understanding of the contribution of living plants to litter decomposition and how interactions of these two sources of C build soil organic matter (SOM). We used a novel triple-isotope approach to determine the effect of living plants on litter decomposition and C cycling. In the first stage of the experiment, we grew a temperate grass commonly used for forage, Poa labillardieri, in a continuously-labelled atmosphere of 14CO2 fertilized with K15NO3, such that the grass biomass was uniformly labelled with 14C and 15N. In the second stage, we constructed litter decomposition mescososms with and without a living plant to test for the effect of a growing plant on litter decomposition. The 14C/15N litter was decomposed in a sandy clay loam while a temperate forage grass, Lolium perenne, grew in an atmosphere of enriched 13CO2. The fate of the litter-14C/15N and plant-13C was traced into soil mineral fractions and dissolved organic matter (DOM) over the course of nine weeks using four destructive harvests of the mesocosms. Our preliminary results suggest that living plants play a major role in the degradation of plant litter, as litter decomposition was greater, both in rate and absolute amount, for soil mesocosms with a growing plant. Our observations during the decomposition experiment suggests that plant roots physically disrupted litter to increase decomposition. Isotopic analyses are currently underway, and transformations of litter-14C will be presented. Refining our understanding of in situ litter decay will add to our growing knowledge of the C cycle.

Increasing Soil Calcium Availability Alters Forest Soil Carbon Stocks

NASA Astrophysics Data System (ADS)

Melvin, A.; Goodale, C. L.

2011-12-01

Acid deposition in the Northeastern U.S. has been linked to a loss of soil base cations, especially calcium (Ca). While much research has addressed the effects of Ca depletion on soil and stream acidification, few studies have investigated its effects on ecosystem carbon (C) balance. We studied the long-term effects of increased Ca availability on C cycling in a northern hardwood forest in the Adirondack Park, NY. In 1989, calcium carbonate (lime) was added to ~ 100 ha of the Woods Lake Watershed to ameliorate the effects of soil Ca depletion. An additional 100 ha were maintained as controls. We hypothesized that the lime addition would improve forest health and that this improvement would be evident in increased tree biomass, leaf litter, and fine root production. Within the forest floor, we anticipated that the increased pH associated with liming would stimulate microbial activity resulting in increased decomposition and basal soil respiration, and reduced C stocks. Additionally, we hypothesized that increased Ca availability could enhance Ca-OM complexation in the upper mineral soils, leading to increased C stocks in these horizons. Eighteen years after liming, soil pH and exchangeable Ca pools remained elevated in the forest floor and upper mineral soil of the limed plots. Forest floor C stocks were significantly larger in limed plots (68 vs. 31 t C ha-1), and were driven primarily by greater C accumulation in the forest floor Oa horizon. Mineral soil C stocks did not differ between limed and control soils. Liming did not affect tree growth, however a net decline in biomass was observed across the entire watershed. There was a trend for larger fine root and foliar litter inputs in limed plots relative to controls, but the observed forest floor accumulation appears to be driven primarily by a suppression of decomposition. Liming reduced basal soil respiration rates by 17 and 43 % in the Oe and Oa horizons, respectively. This research suggests that Ca may stabilize soil organic matter and that long-term Ca depletion caused by acid deposition could have large, unexpected effects on ecosystem C dynamics.

Carbon budget of Nyungwe Tropical Montane Rain Forest in Central Africa

NASA Astrophysics Data System (ADS)

Nyirambangutse, B.; Zibera, E.; Uwizeye, F. K.; Hansson, L.; Nsabimana, D.; Pleijel, H.; Uddling, J.; Wallin, G.

2015-12-01

African tropical rainforests host rich biodiversity and play many roles at different scales such as local, regional and global, in the functioning of the earth system. Despite that the African tropical forests are the world's second largest, it has been neglected in terms of understanding the storage and fluxes of carbon and other nutrients. The question of whether this biome is a net sink or source of atmospheric CO2 is still not answered, and little is known concerning the climate change response. Tropical montane forests are even more poorly sampled compared with their importance. Deeper understanding of these ecosystems is required to provide insights on how they might react under global change. To answer questions related to these issues for African tropical montane forests, 15 permanent 0.5 ha plots were established in 2011 in Nyungwe tropical montane rainforest gazetted as a National Park to protect its extensive floral and faunal diversity. The plots are arranged along an east-westerly transect and includes both primary and secondary forest communities. The study is connected to the global ecosystem monitoring network (GEM, http://gem.tropicalforests.ox.ac.uk/). The aim is to characterize spatial and temporal heterogeneity of carbon and nutrient dynamics processes. The role of microclimate, topography, human disturbances, and plant species to the variability of these pools and processes will be explored. We compare stocks and fluxes of carbon and nutrients of the secondary and primary forest communities. The carbon stock are determined by an inventory of height and diameter at breast height (dbh) of all trees with a dbh above 5 cm, wood density, biomass of understory vegetation, leaf area index, standing and fallen dead wood, fine root biomass and organic content of various soil layers (litter, organic and mineral soil down to 45 cm depth). The carbon fluxes are determined by measurements of photosynthesis and respiration of leaves, above and below ground tree growth (stem, and fine roots), litter fall and soil respiration. Results of the carbon budget defined through the net primary productivity (NPP), autotrophic respiration (Ra) and gross primary productivity (GPP) will be presented, comparing primary and secondary forest communities.

Stand age and fine root biomass, distribution and morphology in a Norway spruce chronosequence in southeast Norway.

PubMed

Børja, Isabella; De Wit, Heleen A; Steffenrem, Arne; Majdi, Hooshang

2008-05-01

We assessed the influence of stand age on fine root biomass and morphology of trees and understory vegetation in 10-, 30-, 60- and 120-year-old Norway spruce stands growing in sandy soil in southeast Norway. Fine root (< 1, 1-2 and 2-5 mm in diameter) biomass of trees and understory vegetation (< 2 mm in diameter) was sampled by soil coring to a depth of 60 cm. Fine root morphological characteristics, such as specific root length (SRL), root length density (RLD), root surface area (RSA), root tip number and branching frequency (per unit root length or mass), were determined based on digitized root data. Fine root biomass and morphological characteristics related to biomass (RLD and RSA) followed the same tendency with chronosequence and were significantly higher in the 30-year-old stand and lower in the 10-year-old stand than in the other stands. Among stands, mean fine root (< 2 mm) biomass ranged from 49 to 398 g m(-2), SLR from 13.4 to 19.8 m g(-1), RLD from 980 to 11,650 m m(-3) and RSA from 2.4 to 35.4 m(2) m(-3). Most fine root biomass of trees was concentrated in the upper 20 cm of the mineral soil and in the humus layer (0-5 cm) in all stands. Understory fine roots accounted for 67 and 25% of total fine root biomass in the 10- and 120-year-old stands, respectively. Stand age had no affect on root tip number or branching frequency, but both parameters changed with soil depth, with increasing number of root tips and decreasing branching frequency with increasing soil depth for root fractions < 2 mm in diameter. Specific (mass based) root tip number and branching density were highest for the finest roots (< 1 mm) in the humus layer. Season (spring or fall) had no effect on tree fine root biomass, but there was a small and significant increase in understory fine root biomass in fall relative to spring. All morphological characteristics showed strong seasonal variation, especially the finest root fraction, with consistently and significantly higher values in spring than in fall. We conclude that fine root biomass, especially in the finest fraction (< 1 mm in diameter), is strongly dependent on stand age. Among stands, carbon concentration in fine root biomass was highest in the 30-year-old stand, and appeared to be associated with the high tree and canopy density during the early stage of stand development. Values of RLD and RSA, morphological features indicative of stand nutrient-uptake efficiency, were higher in the 30-year-old stand than in the other stands.

Elevated CO2 and O3 effects on fine-root survivorship in ponderosa pine mesocosms.

PubMed

Phillips, Donald L; Johnson, Mark G; Tingey, David T; Storm, Marjorie J

2009-07-01

Atmospheric carbon dioxide (CO(2)) and ozone (O(3)) concentrations are rising, which may have opposing effects on tree C balance and allocation to fine roots. More information is needed on interactive CO(2) and O(3) effects on roots, particularly fine-root life span, a critical demographic parameter and determinant of soil C and N pools and cycling rates. We conducted a study in which ponderosa pine (Pinus ponderosa) seedlings were exposed to two levels of CO(2) and O(3) in sun-lit controlled-environment mesocosms for 3 years. Minirhizotrons were used to monitor individual fine roots in three soil horizons every 28 days. Proportional hazards regression was used to analyze effects of CO(2), O(3), diameter, depth, and season of root initiation on fine-root survivorship. More fine roots were produced in the elevated CO(2) treatment than in ambient CO(2). Elevated CO(2), increasing root diameter, and increasing root depth all significantly increased fine-root survivorship and median life span. Life span was slightly, but not significantly, lower in elevated O(3), and increased O(3) did not reduce the effect of elevated CO(2). Median life spans varied from 140 to 448 days depending on the season of root initiation. These results indicate the potential for elevated CO(2) to increase the number of fine roots and their residence time in the soil, which is also affected by root diameter, root depth, and phenology.

Fine-Root Production in an Amazon Rain Forest: Deep Roots are an Important Component of Net Primary Productivity

NASA Astrophysics Data System (ADS)

Norby, R.; Cordeiro, A. L.; Oblitas, E.; Valverde-Barrantes, O.; Quesada, C. A.

2017-12-01

Fine-root production is a significant component of net primary production (NPP), but it is the most difficult of the major components to measure. Data on fine-root production are especially sparse from tropical forests, and therefore the estimates of tropical forest NPP may not be accurate. Many estimates of fine-root production are based on observations in the top 15 or 30 cm of soil, with the implicit assumption that this approach will capture most of the root distribution. We measured fine-root production in a 30-m tall, old-growth, terra firme rain forest near Manaus, Brazil, which is the site for a free-air CO2 enrichment (FACE) experiment. Ten minirhizotrons were installed at a 45 degree angle to a depth of 1.1 meters; the tubes were installed 2 years before any measurements were made to allow the root systems to recover from disturbance. Images were collected biweekly, and measurements of root length per area of minirhizotron window were scaled up to grams of root per unit land area. Scaling up minirhizotron measurments is problematic, but our estimate of fine-root standing crop in the top 15 cm of soil (281 ± 37 g dry matter m-2) compares well with a direct measurement of fine roots in two nearby 15-cm soil cores (290 ± 37 g m-2). Although the largest fraction of the fine-root standing crop was in the upper soil horizons, 44% of the fine-root mass was deeper than 30 cm, and 17% was deeper than 60 cm. Annual fine-root production was 934 ± 234 g dry matter m-2 (453 ± 113 g C m-2), which was 35% of estimated NPP of the forest stand (1281 g C m-2). A previous estimate of NPP of the forest at this site was smaller (1010 g m-2), but that estimate relied on fine-root production measured elsewhere and only in the top 10 or 30 cm of soil; fine roots accounted for 21% of NPP in that analysis. Extending root observations deeper into the soil will improve estimates of the contribution of fine-root production to NPP, which will in turn improve estimates of ecosystem carbon use efficiency. Improved measurements of roots and their distribution throughout the soil profile will advance our understanding of water and nutrient acquisition by trees and provide important benchmarks for models of biogeochemical cycling in tropical ecosystems and their responses to elevated atmospheric CO2.

Nine Years of Irrigation Cause Vegetation and Fine Root Shifts in a Water-Limited Pine Forest

PubMed Central

Herzog, Claude; Steffen, Jan; Graf Pannatier, Elisabeth; Hajdas, Irka; Brunner, Ivano

2014-01-01

Scots pines (Pinus sylvestris L.) in the inner-Alpine dry valleys of Switzerland have suffered from increased mortality during the past decades, which has been caused by longer and more frequent dry periods. In addition, a proceeding replacement of Scots pines by pubescent oaks (Quercus pubescens Willd.) has been observed. In 2003, an irrigation experiment was performed to track changes by reducing drought pressure on the natural pine forest. After nine years of irrigation, we observed major adaptations in the vegetation and shifts in Scots pine fine root abundance and structure. Irrigation permitted new plant species to assemble and promote canopy closure with a subsequent loss of herb and moss coverage. Fine root dry weight increased under irrigation and fine roots had a tendency to elongate. Structural composition of fine roots remained unaffected by irrigation, expressing preserved proportions of cellulose, lignin and phenolic substances. A shift to a more negative δ13C signal in the fine root C indicates an increased photosynthetic activity in irrigated pine trees. Using radiocarbon (14C) measurement, a reduced mean age of the fine roots in irrigated plots was revealed. The reason for this is either an increase in newly produced fine roots, supported by the increase in fine root biomass, or a reduced lifespan of fine roots which corresponds to an enhanced turnover rate. Overall, the responses belowground to irrigation are less conspicuous than the more rapid adaptations aboveground. Lagged and conservative adaptations of tree roots with decadal lifespans are challenging to detect, hence demanding for long-term surveys. Investigations concerning fine root turnover rate and degradation processes under a changing climate are crucial for a complete understanding of C cycling. PMID:24802642

Effect of different cover crops on C and N cycling in sorghum NT systems.

PubMed

Frasier, Ileana; Quiroga, Alberto; Noellemeyer, Elke

2016-08-15

In many no-till (NT) systems, residue input is low and fallow periods excessive, for which reasons soil degradation occurs. Cover crops could improve organic matter, biological activity, and soil structure. In order to study changes in soil carbon, nitrogen and microbial biomass a field experiment (2010-2012) was set up with sorghum (Sorghum bicolor Moench.) monoculture and with cover crops. Treatments were control (NT with bare fallow), rye (Secale cereale L.) (R), rye with nitrogen fertilization (R+N), vetch (Vicia villosa Roth.) (V), and rye-vetch mixture (VR) cover crops. A completely randomized block design with 4 replicates was used. Soil was sampled once a year at 0.06 and 0.12m depth for total C, microbial biomass carbon (MBC) and-nitrogen (MBN) determinations. Shoot and root biomass of sorghum and cover crops, litter biomass, and their respective carbon and nitrogen contents were determined. Soil temperatures at 0.06 and 0.12m depth, volumetric water contents and nitrate concentrations were determined at sowing, and harvest of each crop, and during sorghum's vegetative phase. NT led to a small increase in MBC and MBN, despite low litter and root biomass residue. Cover crops increased litter, root biomass, total C, MBC, and MBN. Relationships between MBC, MBN, and root-C and -N adjusted to logistic models (R(2)=0.61 and 0.43 for C and N respectively). Litter cover improved soil moisture to 45-50% water filled pore space and soil temperatures not exceeding 25°C during the warmest month. Microbial biomass stabilized at 20.1gCm(-2) and 1.9gNm(-2) in the upper 0.06m. Soil litter disappearance was a good indicator of mineral N availability. These findings support the view that cover crops, specifically legumes in NT systems can increase soil ecosystem services related to water and carbon storage, habitat for biodiversity, and nutrient availability. Copyright © 2016 Elsevier B.V. All rights reserved.

Root traits predict decomposition across a landscape-scale grazing experiment

PubMed Central

Smith, Stuart W; Woodin, Sarah J; Pakeman, Robin J; Johnson, David; van der Wal, René

2014-01-01

Root litter is the dominant soil carbon and nutrient input in many ecosystems, yet few studies have considered how root decomposition is regulated at the landscape scale and how this is mediated by land-use management practices. Large herbivores can potentially influence below-ground decomposition through changes in soil microclimate (temperature and moisture) and changes in plant species composition (root traits). To investigate such herbivore-induced changes, we quantified annual root decomposition of upland grassland species in situ across a landscape-scale livestock grazing experiment, in a common-garden experiment and in laboratory microcosms evaluating the influence of key root traits on decomposition. Livestock grazing increased soil temperatures, but this did not affect root decomposition. Grazing had no effect on soil moisture, but wetter soils retarded root decomposition. Species-specific decomposition rates were similar across all grazing treatments, and species differences were maintained in the common-garden experiment, suggesting an overriding importance of litter type. Supporting this, in microcosms, roots with lower specific root area (m2 g−1) or those with higher phosphorus concentrations decomposed faster. Our results suggest that large herbivores alter below-ground carbon and nitrogen dynamics more through their effects on plant species composition and associated root traits than through effects on the soil microclimate. PMID:24841886

Nitrogen cycle inferred by δ15N in larch stand in northern Mongolia

NASA Astrophysics Data System (ADS)

Hayashi, Mika; Lopez C., Maximo Larry; Nobori, Yoshihiro; Byambasuren, Mijidsuren; Boy, Jens

2017-04-01

Mongolia represents the southernmost border of boreal forests and therefore is more sensitive to climate change. In boreal regions forest grow under N-limited conditions and for this reason rely on ectomycorrhizal fungi for the uptake of inorganic and dissolved organic N from the soil solution. A drastic increase in air temperature and a decrease or almost no change in summer precipitation has led to a severe climate induced drought that is expected to impact the nitrogen cycle in this region. Until now there has been no study on the nitrogen dynamics and especially not by means of stable isotope in the entire Eurasian boreal forests. Thus, in this study we evaluate the effect of spatial and climatic characteristics on the soil-tree N exchange in three representative larch forest stands (Larix sibirica) in the forest-steppe zone of central Mongolia. The results showed significant differences in the soil available N content and the influence that this difference exerts on the level of N fractionation from roots to leaves. In this study we observed heavier d15N in fine roots than in short roots (where the ectomycorrhizal fungi is attached) which was used as a proxy for soil available d15N. This value did not match total N d15N in any of the three sites selected for this study even though total N d15N has been used in previous studies as a proxy for available N d15N. Higher fractionation was observed in forest stands where available N was more limited indicating a heavier reliance on ectomycorrhizal fungi for inorganic N uptake. Coincidentally, the site with less available N was the southern site with the lowest precipitation. The opposite was found in the northern sites where available N was higher and thus fractionation showed lower values. Different tree tissues (fine and short-roots, stem, leaves) and litter showed multiple, intra-plant processes that influenced the isotope signal of the source-sink nitrogen dynamics.

The effect of limited availability of N or water on C allocation to fine roots and annual fine root turnover in Alnus incana and Salix viminalis.

PubMed

Rytter, Rose-Marie

2013-09-01

The effect of limited nitrogen (N) or water availability on fine root growth and turnover was examined in two deciduous species, Alnus incana L. and Salix viminalis L., grown under three different regimes: (i) supply of N and water in amounts which would not hamper growth, (ii) limited N supply and (iii) limited water supply. Plants were grown outdoors during three seasons in covered and buried lysimeters placed in a stand structure and filled with quartz sand. Computer-controlled irrigation and fertilization were supplied through drip tubes. Production and turnover of fine roots were estimated by combining minirhizotron observations and core sampling, or by sequential core sampling. Annual turnover rates of fine roots <1 mm (5-6 year(-1)) and 1-2 mm (0.9-2.8 year(-1)) were not affected by changes in N or water availability. Fine root production (<1 mm) differed between Alnus and Salix, and between treatments in Salix; i.e., absolute length and biomass production increased in the order: water limited < unlimited < N limited. Few treatment effects were detected for fine roots 1-2 mm. Proportionally more C was allocated to fine roots (≤2 mm) in N or water-limited Salix; 2.7 and 2.3 times the allocation to fine roots in the unlimited regime, respectively. Estimated input to soil organic carbon increased by ca. 20% at N limitation in Salix. However, future studies on fine root decomposition under various environmental conditions are required. Fine root growth responses to N or water limitation were less pronounced in Alnus, thus indicating species differences caused by N-fixing capacity and slower initial growth in Alnus, or higher fine root plasticity in Salix. A similar seasonal growth pattern across species and treatments suggested the influence of outer stimuli, such as temperature and light.

Differences in Fine-Root Biomass of Trees and Understory Vegetation among Stand Types in Subtropical Forests

PubMed Central

Fu, Xiaoli; Wang, Jianlei; Di, Yuebao; Wang, Huimin

2015-01-01

Variation of total fine-root biomass among types of tree stands has previously been attributed to the characteristics of the stand layers. The effects of the understory vegetation on total fine-root biomass are less well studied. We examined the variation of total fine-root biomass in subtropical tree stands at two sites of Datian and Huitong in China. The two sites have similar humid monsoon climate but different soil organic carbon. One examination compared two categories of basal areas (high vs. low basal area) in stands of single species. A second examination compared single-species and mixed stands with comparable basal areas. Low basal area did not correlate with low total fine-root biomass in the single-species stands. The increase in seedling density but decrease in stem density for the low basal area stands at Datian and the quite similar stand structures for the basal-area contrast at Huitong helped in the lack of association between basal area and total fine-root biomass at the two sites, respectively. The mixed stands also did not yield higher total fine-root biomasses. In addition to the lack of niche complementarity between tree species, the differences in stem and seedling densities and the belowground competition between the tree and non-tree species also contributed to the similarity of the total fine-root biomasses in the mixed and single-species stands. Across stand types, the more fertile site Datian yielded higher tree, non-tree and total fine-root biomasses than Huitong. However, the contribution of non-tree fine-root biomass to the total fine-root biomass was higher at Huitong (29.4%) than that at Datian (16.7%). This study suggests that the variation of total fine-root biomass across stand types not only was associated with the characteristics of trees, but also may be highly dependent on the understory layer. PMID:26047358

Differences in Fine-Root Biomass of Trees and Understory Vegetation among Stand Types in Subtropical Forests.

PubMed

Fu, Xiaoli; Wang, Jianlei; Di, Yuebao; Wang, Huimin

2015-01-01

Variation of total fine-root biomass among types of tree stands has previously been attributed to the characteristics of the stand layers. The effects of the understory vegetation on total fine-root biomass are less well studied. We examined the variation of total fine-root biomass in subtropical tree stands at two sites of Datian and Huitong in China. The two sites have similar humid monsoon climate but different soil organic carbon. One examination compared two categories of basal areas (high vs. low basal area) in stands of single species. A second examination compared single-species and mixed stands with comparable basal areas. Low basal area did not correlate with low total fine-root biomass in the single-species stands. The increase in seedling density but decrease in stem density for the low basal area stands at Datian and the quite similar stand structures for the basal-area contrast at Huitong helped in the lack of association between basal area and total fine-root biomass at the two sites, respectively. The mixed stands also did not yield higher total fine-root biomasses. In addition to the lack of niche complementarity between tree species, the differences in stem and seedling densities and the belowground competition between the tree and non-tree species also contributed to the similarity of the total fine-root biomasses in the mixed and single-species stands. Across stand types, the more fertile site Datian yielded higher tree, non-tree and total fine-root biomasses than Huitong. However, the contribution of non-tree fine-root biomass to the total fine-root biomass was higher at Huitong (29.4%) than that at Datian (16.7%). This study suggests that the variation of total fine-root biomass across stand types not only was associated with the characteristics of trees, but also may be highly dependent on the understory layer.

The contribution of fine roots to peatland stability under changing environmental conditions

NASA Astrophysics Data System (ADS)

Malhotra, A.; Brice, D. J.; Childs, J.; Phillips, J.; Hanson, P. J.; Iversen, C. M.

2017-12-01

Fine-root production and traits are closely linked with ecosystem nutrient and water fluxes, and may regulate these fluxes in response to environmental change. Plant strategies can shift to favoring below- over aboveground biomass allocation when nutrients or moisture are limited. Fine-roots traits such as root tissue density (RTD) or specific root length (SRL) can also adapt to the environment, for example, by maximizing the area of soil exploited by decreasing RTD and increasing SRL during dry conditions. Fine-root trait plasticity could contribute to the stability of peatland carbon function in response to environmental change. However, the extent and mechanisms of peatland fine-root plasticity are unknown. We investigated fine-root growth and traits and their link to environmental factors and aboveground dynamics at SPRUCE (Spruce and Peatland Responses Under Changing Environments), a warming and elevated CO2 (eCO2) experiment in an ombrotrophic peatland. In the first growing season of whole ecosystem warming, fine-root production increased with warming and drying. Above- versus belowground allocation strategies varied by plant functional type (PFT). In shrubs, contrary to our expectation, aboveground- to fine-root production allocation ratio increased with dryer conditions, perhaps as a response to a concurrent increase in nutrients. Trait response hypotheses were largely supported, with RTD decreasing and SRL increasing with warming; however, response varied among PFTs. Once eCO2 was turned on in the second growing season, preliminary results suggest interactive effects of warming and eCO2 on total fine-root production: production decreased or increased with warming in ambient or elevated CO2 plots, respectively. Both trait and production responses to warming and eCO2 varied by microtopography and depth. Our results highlight plasticity of fine-root traits and biomass allocation strategies; the extent and mechanism of which varies by PFT. We will summarize our results using a trait-based approach as a first step toward modeling fine-root contributions to peatland carbon stability in response to environmental change.

Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce

PubMed Central

Nacke, Heiko; Goldmann, Kezia; Schöning, Ingo; Pfeiffer, Birgit; Kaiser, Kristin; Castillo-Villamizar, Genis A.; Schrumpf, Marion; Buscot, François; Daniel, Rolf; Wubet, Tesfaye

2016-01-01

The complex interactions between trees and soil microbes in forests as well as their inherent seasonal and spatial variations are poorly understood. In this study, we analyzed the effects of major European tree species (Fagus sylvatica L. and Picea abies (L.) Karst) on soil bacterial and fungal communities. Mineral soil samples were collected from different depths (0–10, 10–20 cm) and at different horizontal distances from beech or spruce trunks (0.5, 1.5, 2.5, 3.5 m) in early summer and autumn. We assessed the composition of soil bacterial and fungal communities based on 16S rRNA gene and ITS DNA sequences. Community composition of bacteria and fungi was most strongly affected by soil pH and tree species. Different ectomycorrhizal fungi (e.g., Tylospora) known to establish mutualistic associations with plant roots showed a tree species preference. Moreover, bacterial and fungal community composition showed spatial and seasonal shifts in soil surrounding beech and spruce. The relative abundance of saprotrophic fungi was higher at a depth of 0–10 vs. 10–20 cm depth. This was presumably a result of changes in nutrient availability, as litter input and organic carbon content decreased with soil depth. Overall bacterial community composition showed strong variations under spruce with increasing distance from the tree trunks, which might be attributed in part to higher fine root biomass near spruce trunks. Furthermore, overall bacterial community composition was strongly affected by season under deciduous trees. PMID:28066384

Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce.

PubMed

Nacke, Heiko; Goldmann, Kezia; Schöning, Ingo; Pfeiffer, Birgit; Kaiser, Kristin; Castillo-Villamizar, Genis A; Schrumpf, Marion; Buscot, François; Daniel, Rolf; Wubet, Tesfaye

2016-01-01

The complex interactions between trees and soil microbes in forests as well as their inherent seasonal and spatial variations are poorly understood. In this study, we analyzed the effects of major European tree species ( Fagus sylvatica L. and Picea abies (L.) Karst) on soil bacterial and fungal communities. Mineral soil samples were collected from different depths (0-10, 10-20 cm) and at different horizontal distances from beech or spruce trunks (0.5, 1.5, 2.5, 3.5 m) in early summer and autumn. We assessed the composition of soil bacterial and fungal communities based on 16S rRNA gene and ITS DNA sequences. Community composition of bacteria and fungi was most strongly affected by soil pH and tree species. Different ectomycorrhizal fungi (e.g., Tylospora ) known to establish mutualistic associations with plant roots showed a tree species preference. Moreover, bacterial and fungal community composition showed spatial and seasonal shifts in soil surrounding beech and spruce. The relative abundance of saprotrophic fungi was higher at a depth of 0-10 vs. 10-20 cm depth. This was presumably a result of changes in nutrient availability, as litter input and organic carbon content decreased with soil depth. Overall bacterial community composition showed strong variations under spruce with increasing distance from the tree trunks, which might be attributed in part to higher fine root biomass near spruce trunks. Furthermore, overall bacterial community composition was strongly affected by season under deciduous trees.

An empirical assessment of forest floor carbon stock components across the United States

Treesearch

Christopher W. Woodall; Charles H. Perry; James A. Westfall

2012-01-01

Despite its prevalent reporting in regional/national greenhouse gas inventories (NGHGI), forest floor (FF) carbon (C) stocks (including litter, humus, and fine woody debris [FWD]) have not been empirically measured using a consistent approach across forests of the US. The goal of this study was to use the first national field inventory of litter and humic layer depths...

Fine root dynamics along an elevational gradient in tropical Amazonian and Andean forests

NASA Astrophysics Data System (ADS)

Girardin, C. A. J.; Aragão, L. E. O. C.; Malhi, Y.; Huaraca Huasco, W.; Metcalfe, D. B.; Durand, L.; Mamani, M.; Silva-Espejo, J. E.; Whittaker, R. J.

2013-01-01

The key role of tropical forest belowground carbon stocks and fluxes is well recognised as one of the main components of the terrestrial ecosystem carbon cycle. This study presents the first detailed investigation of spatial and temporal patterns of fine root stocks and fluxes in tropical forests along an elevational gradient, ranging from the Peruvian Andes (3020 m) to lowland Amazonia (194 m), with mean annual temperatures of 11.8°C to 26.4 °C and annual rainfall values of 1900 to 1560 mm yr-1, respectively. Specifically, we analyse abiotic parameters controlling fine root dynamics, fine root growth characteristics, and seasonality of net primary productivity along the elevation gradient. Root and soil carbon stocks were measured by means of soil cores, and fine root productivity was recorded using rhizotron chambers and ingrowth cores. We find that mean annual fine root below ground net primary productivity in the montane forests (0-30 cm depth) ranged between 4.27±0.56 Mg C ha-1 yr-1 (1855 m) and 1.72±0.87 Mg C ha-1 yr-1 (3020 m). These values include a correction for finest roots (<0.6 mm diameter), which we suspect are under sampled, resulting in an underestimation of fine roots by up to 31% in current ingrowth core counting methods. We investigate the spatial and seasonal variation of fine root dynamics using soil depth profiles and an analysis of seasonal amplitude along the elevation gradient. We report a stronger seasonality of NPPFineRoot within the cloud immersion zone, most likely synchronised to seasonality of solar radiation. Finally, we provide the first insights into root growth characteristics along a tropical elevation transect: fine root area and fine root length increase significantly in the montane cloud forest. These insights into belowground carbon dynamics of tropical lowland and montane forests have significant implications for our understanding of the global tropical forest carbon cycle.

Tree Age Effects on Fine Root Biomass and Morphology over Chronosequences of Fagus sylvatica, Quercus robur and Alnus glutinosa Stands

PubMed Central

Jagodzinski, Andrzej M.; Ziółkowski, Jędrzej; Warnkowska, Aleksandra; Prais, Hubert

2016-01-01

There are few data on fine root biomass and morphology change in relation to stand age. Based on chronosequences for beech (9–140 years old), oak (11–140 years) and alder (4–76 years old) we aimed to examine how stand age affects fine root biomass and morphology. Soil cores from depths of 0–15 cm and 16–30 cm were used for the study. In contrast to previously published studies that suggested that maximum fine root biomass is reached at the canopy closure stage of stand development, we found almost linear increases of fine root biomass over stand age within the chronosequences. We did not observe any fine root biomass peak in the canopy closure stage. However, we found statistically significant increases of mean fine root biomass for the average individual tree in each chronosequence. Mean fine root biomass (0–30 cm) differed significantly among tree species chronosequences studied and was 4.32 Mg ha-1, 3.71 Mg ha-1 and 1.53 Mg ha-1, for beech, oak and alder stands, respectively. The highest fine root length, surface area, volume and number of fine root tips (0–30 cm soil depth), expressed on a stand area basis, occurred in beech stands, with medium values for oak stands and the lowest for alder stands. In the alder chronosequence all these values increased with stand age, in the beech chronosequence they decreased and in the oak chronosequence they increased until ca. 50 year old stands and then reached steady-state. Our study has proved statistically significant negative relationships between stand age and specific root length (SRL) in 0–30 cm soil depth for beech and oak chronosequences. Mean SRLs for each chronosequence were not significantly different among species for either soil depth studied. The results of this study indicate high fine root plasticity. Although only limited datasets are currently available, these data have provided valuable insight into fine root biomass and morphology of beech, oak and alder stands. PMID:26859755

A global analysis of fine root production as affected by soil nitrogen and phosphorus.

PubMed

Yuan, Z Y; Chen, Han Y H

2012-09-22

Fine root production is the largest component of belowground production and plays substantial roles in the biogeochemical cycles of terrestrial ecosystems. The increasing availability of nitrogen (N) and phosphorus (P) due to human activities is expected to increase aboveground net primary production (ANNP), but the response of fine root production to N and P remains unclear. If roots respond to nutrients as ANNP, fine root production is anticipated to increase with increasing soil N and P. Here, by synthesizing data along the nutrient gradient from 410 natural habitats and from 469 N and/or P addition experiments, we showed that fine root production increased in terrestrial ecosystems with an average increase along the natural N gradient of up to 0.5 per cent with increasing soil N. Fine root production also increased with soil P in natural conditions, particularly at P < 300 mg kg(-1). With N, P and combined N + P addition, fine root production increased by a global average of 27, 21 and 40 per cent, respectively. However, its responses differed among ecosystems and soil types. The global average increases in fine root production are lower than those of ANNP, indicating that above- and belowground counterparts are coupled, but production allocation shifts more to aboveground with higher soil nutrients. Our results suggest that the increasing fertilizer use and combined N deposition at present and in the future will stimulate fine root production, together with ANPP, probably providing a significant influence on atmospheric CO(2) emissions.

Inhibition of seedling survival under Rhododendron maximum (Ericaceae): could allelopathy be a cause?

PubMed

Nilsen, E T; Walker, J F; Miller, O K; Semones, S W; Lei, T T; Clinton, B D

1999-11-01

In the southern Appalachian mountains a subcanopy species, Rhododendron maximum, inhibits the establishment and survival of canopy tree seedlings. One of the mechanisms by which seedlings could be inhibited is an allelopathic effect of decomposing litter or leachate from the canopy of R. maximum (R.m.) on seed germination, root elongation, or mycorrhizal colonization. The potential for allelopathy by R.m. was tested with two bioassay species (lettuce and cress), with seeds from four native tree species, and with three ectomycorrhizal fungi. Inhibitory influences of throughfall, fresh litter, and decomposed litter (organic layer) from forest with R.m. (+R.m. sites) were compared to similar extractions made from forest without R.m. (-R.m. sites). Throughfall and leachates of the organic layer from both +R.m. and -R.m. sites stimulated germination of the bioassay species above that of the distilled water control, to a similar extent. There was an inhibitory effect of leachates of litter from +R.m. sites on seed germination and root elongation rate of both bioassay species compared with that of litter from -R.m. sites. Native tree seed stratified in forest floor material from both forest types had a slightly higher seed germination rate compared with the control. A 2-yr study of seed germination and seedling mortality of two tree species, Quercus rubra and Prunus serotina, in field plots showed no significant influence of litter or organic layer from either forest type. Incorporating R.m. leaf material into the growth medium in vitro depressed growth of one ectomycorrhizal species but did not affect two other species. Leaf material from other deciduous tree species depressed ectomycorrhizal growth to a similar or greater extent as leaf material from R.m. In conclusion, R.m. litter can have an allelopathic effect on seed germination and root elongation of bioassay species as well as some ectomycorrhizal species. However, this allelopathic affect is not manifest in field sites and is not likely to be an important cause for the inhibition of seedling survival within thickets of R.m.

Fine root respiration in the mangrove Rhizophora mangle over variation in forest stature and nutrient availability.

PubMed

Lovelock, Catherine E; Ruess, Roger W; Feller, Ilka C

2006-12-01

Root respiration uses a significant proportion of photosynthetically fixed carbon (C) and is a globally important source of C liberated from soils. Mangroves, which are an important and productive forest resource in many tropical and subtropical countries, sustain a high ratio of root to shoot biomass which may indicate that root respiration is a particularly important component in mangrove forest carbon budgets. Mangroves are often exposed to nutrient pollution from coastal waters. Here we assessed the magnitude of fine root respiration in mangrove forests in Belize and investigated how root respiration is influenced by nutrient additions. Respiration rates of excised fine roots of the mangrove, Rhizophora mangle L., were low (4.01 +/- 0.16 nmol CO(2) g(-1) s(-1)) compared to those measured in temperate tree species at similar temperatures. In an experiment where trees where fertilized with nitrogen (N) or phosphorus (P) in low productivity dwarf forests (1-2 m height) and more productive, taller (4- 7 m height) seaward fringing forests, respiration of fine roots did not vary consistently with fertilization treatments or with forest stature. Fine roots of taller fringe trees had higher concentrations of both N and P compared to dwarf trees. Fertilization with P enhanced fine root P concentrations in both dwarf and fringe trees, but reduced root N concentrations compared to controls. Fertilization with N had no effect on root N or P concentrations. Unlike photosynthetic C gain and growth, which is strongly limited by P availability in dwarf forests at this site, fine root respiration (expressed on a mass basis) was variable, but showed no significant enhancements with nutrient additions. Variation in fine root production and standing biomass are, therefore, likely to be more important factors determining C efflux from mangrove sediments than variations in fine root respiration per unit mass.

Changes in fine-root production, phenology and spatial distribution in response to N application in irrigated sweet cherry trees.

PubMed

Artacho, Pamela; Bonomelli, Claudia

2016-05-01

Factors regulating fine-root growth are poorly understood, particularly in fruit tree species. In this context, the effects of N addition on the temporal and spatial distribution of fine-root growth and on the fine-root turnover were assessed in irrigated sweet cherry trees. The influence of other exogenous and endogenous factors was also examined. The rhizotron technique was used to measure the length-based fine-root growth in trees fertilized at two N rates (0 and 60 kg ha(-1)), and the above-ground growth, leaf net assimilation, and air and soil variables were simultaneously monitored. N fertilization exerted a basal effect throughout the season, changing the magnitude, temporal patterns and spatial distribution of fine-root production and mortality. Specifically, N addition enhanced the total fine-root production by increasing rates and extending the production period. On average, N-fertilized trees had a length-based production that was 110-180% higher than in control trees, depending on growing season. Mortality was proportional to production, but turnover rates were inconsistently affected. Root production and mortality was homogeneously distributed in the soil profile of N-fertilized trees while control trees had 70-80% of the total fine-root production and mortality concentrated below 50 cm depth. Root mortality rates were associated with soil temperature and water content. In contrast, root production rates were primarily under endogenous control, specifically through source-sink relationships, which in turn were affected by N supply through changes in leaf photosynthetic level. Therefore, exogenous and endogenous factors interacted to control the fine-root dynamics of irrigated sweet cherry trees. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Changes in fine-root production, phenology and spatial distribution in response to N application in irrigated sweet cherry trees

PubMed Central

Artacho, Pamela; Bonomelli, Claudia

2016-01-01

Factors regulating fine-root growth are poorly understood, particularly in fruit tree species. In this context, the effects of N addition on the temporal and spatial distribution of fine-root growth and on the fine-root turnover were assessed in irrigated sweet cherry trees. The influence of other exogenous and endogenous factors was also examined. The rhizotron technique was used to measure the length-based fine-root growth in trees fertilized at two N rates (0 and 60 kg ha−1), and the above-ground growth, leaf net assimilation, and air and soil variables were simultaneously monitored. N fertilization exerted a basal effect throughout the season, changing the magnitude, temporal patterns and spatial distribution of fine-root production and mortality. Specifically, N addition enhanced the total fine-root production by increasing rates and extending the production period. On average, N-fertilized trees had a length-based production that was 110–180% higher than in control trees, depending on growing season. Mortality was proportional to production, but turnover rates were inconsistently affected. Root production and mortality was homogeneously distributed in the soil profile of N-fertilized trees while control trees had 70–80% of the total fine-root production and mortality concentrated below 50 cm depth. Root mortality rates were associated with soil temperature and water content. In contrast, root production rates were primarily under endogenous control, specifically through source–sink relationships, which in turn were affected by N supply through changes in leaf photosynthetic level. Therefore, exogenous and endogenous factors interacted to control the fine-root dynamics of irrigated sweet cherry trees. PMID:26888890

Effects of Manipulated Above- and Belowground Organic Matter Input on Soil Respiration in a Chinese Pine Plantation

PubMed Central

Zhao, Bo; Wu, Lianhai; Zhang, Chunyu; Zhao, Xiuhai; Gadow, Klaus v.

2015-01-01

Alteration in the amount of soil organic matter input can have profound effect on carbon dynamics in forest soils. The objective of our research was to determine the response in soil respiration to above- and belowground organic matter manipulation in a Chinese pine (Pinus tabulaeformis) plantation. Five organic matter treatments were applied during a 2-year experiment: both litter removal and root trenching (LRRT), only litter removal (LR), control (CK), only root trenching (RT) and litter addition (LA). We found that either aboveground litter removal or root trenching decreased soil respiration. On average, soil respiration rate was significantly decreased in the LRRT treatment, by about 38.93% ± 2.01% compared to the control. Soil respiration rate in the LR treatment was 30.65% ± 1.87% and in the RT treatment 17.65% ± 1.95% lower than in the control. Litter addition significantly increased soil respiration rate by about 25.82% ± 2.44% compared to the control. Soil temperature and soil moisture were the main factors affecting seasonal variation in soil respiration. Up to the 59.7% to 82.9% seasonal variation in soil respiration is explained by integrating soil temperature and soil moisture within each of the various organic matter treatments. The temperature sensitivity parameter, Q 10, was higher in the RT (2.72) and LA (3.19) treatments relative to the control (2.51), but lower in the LRRT (1.52) and LR treatments (1.36). Our data suggest that manipulation of soil organic matter input can not only alter soil CO2 efflux, but also have profound effect on the temperature sensitivity of organic carbon decomposition in a temperate pine forest. PMID:25970791

Effects of manipulated above- and belowground organic matter input on soil respiration in a Chinese pine plantation.

PubMed

Fan, Juan; Wang, Jinsong; Zhao, Bo; Wu, Lianhai; Zhang, Chunyu; Zhao, Xiuhai; Gadow, Klaus V

2015-01-01

Alteration in the amount of soil organic matter input can have profound effect on carbon dynamics in forest soils. The objective of our research was to determine the response in soil respiration to above- and belowground organic matter manipulation in a Chinese pine (Pinus tabulaeformis) plantation. Five organic matter treatments were applied during a 2-year experiment: both litter removal and root trenching (LRRT), only litter removal (LR), control (CK), only root trenching (RT) and litter addition (LA). We found that either aboveground litter removal or root trenching decreased soil respiration. On average, soil respiration rate was significantly decreased in the LRRT treatment, by about 38.93% ± 2.01% compared to the control. Soil respiration rate in the LR treatment was 30.65% ± 1.87% and in the RT treatment 17.65% ± 1.95% lower than in the control. Litter addition significantly increased soil respiration rate by about 25.82% ± 2.44% compared to the control. Soil temperature and soil moisture were the main factors affecting seasonal variation in soil respiration. Up to the 59.7% to 82.9% seasonal variation in soil respiration is explained by integrating soil temperature and soil moisture within each of the various organic matter treatments. The temperature sensitivity parameter, Q10, was higher in the RT (2.72) and LA (3.19) treatments relative to the control (2.51), but lower in the LRRT (1.52) and LR treatments (1.36). Our data suggest that manipulation of soil organic matter input can not only alter soil CO2 efflux, but also have profound effect on the temperature sensitivity of organic carbon decomposition in a temperate pine forest.

The Potential of Five Winter-grown Crops to Reduce Root-knot Nematode Damage and Increase Yield of Tomato

PubMed Central

López-Pérez, Jose Antonio; Roubtsova, Tatiana; de Cara García, Miguel

2010-01-01

Broccoli (Brassica oleracea), carrot (Daucus carota), marigold (Tagetes patula), nematode-resistant tomato (Solanum lycopersicum), and strawberry (Fragaria ananassa) were grown for three years during the winter in a root-knot nematode (Meloidogyne incognita) infested field in Southern California. Each year in the spring, the tops of all crops were shredded and incorporated in the soil. Amendment with poultry litter was included as a sub-treatment. The soil was then covered with clear plastic for six weeks and M. incognita-susceptible tomato was grown during the summer season. Plastic tarping raised the average soil temperature at 13 cm depth by 7°C.The different winter-grown crops or the poultry litter did not affect M. incognita soil population levels. However, root galling on summer tomato was reduced by 36%, and tomato yields increased by 19% after incorporating broccoli compared to the fallow control. This crop also produced the highest amount of biomass of the five winter-grown crops. Over the three-year trial period, poultry litter increased tomato yields, but did not affect root galling caused by M. incognita. We conclude that cultivation followed by soil incorporation of broccoli reduced M. incognita damage to tomato. This effect is possibly due to delaying or preventing a portion of the nematodes to reach the host roots. We also observed that M. incognita populations did not increase under a host crop during the cool season when soil temperatures remained low (< 18°C). PMID:22736848

The Function of the Superficial Root Mat in the Biogeochemical Cycles of Nutrients in Congolese Eucalyptus Plantations

PubMed Central

LACLAU, JEAN‐PAUL; TOUTAIN, FRANÇOIS; M’BOU, ARMEL THONGO; ARNAUD, MICHEL; JOFFRE, RICHARD; RANGER, JACQUES

2004-01-01

• Background and Aims The importance of superficial root mats inside the forest floor for the nutrition of Amazonian rain forests has been extensively investigated. The present study was aimed at assessing the function of a root mat adherent to decomposing organic material observed in Eucalyptus plantations. • Methods The development of the root mat was studied through micromorphological observations of thin litter sections, and the influence of soil microtopography and soil water repellency on root mat biomass was assessed in situ on an area of 5 m2. In addition, input–output budgets of nutrients within the forest floor were established from measurements of litterfall, dissolved nutrients in gravitational solutions, and forest floor nutrient contents. • Key Findings The amounts of nutrients released during litter decay in this ecosystem during the period of study were, on average, 46, 3, 4, 19 and 17 kg ha–1 year–1 for N, P, K, Ca and Mg, respectively. The simultaneous measurements of the chemical composition of throughfall solutions and leachates beneath the forest floor showed a very quick uptake of nutrients by the root mat during the decomposition processes. Indeed, the solutions did not become noticeably enriched in nutrients during their passage through the holorganic layer, despite large amounts of elements being released during litter decay. The root mat biomass decreased significantly during the dry season, and a preferential development in microdepressions at the soil surface was observed. A strong water repellency observed in these depressions might enhance the ability of the roots to take up water and nutrients during the dry periods. • Conclusions The root mat was active throughout the year to catch the flux of nutrients from the biodegradation of the forest floor, preventing the transfer of dissolved nutrients toward deeper soil horizons. This mechanism is involved in the successful adaptation of this Eucalyptus hybrid in areas covered by ‘climacic’ savannas in Congo. PMID:14749252

Combined effects of nitrogen addition and organic matter manipulation on soil respiration in a Chinese pine forest.

PubMed

Wang, Jinsong; Wu, L; Zhang, Chunyu; Zhao, Xiuhai; Bu, Wensheng; Gadow, Klaus V

2016-11-01

The response of soil respiration (Rs) to nitrogen (N) addition is one of the uncertainties in modelling ecosystem carbon (C). We reported on a long-term nitrogen (N) addition experiment using urea (CO(NH 2 ) 2 ) fertilizer in which Rs was continuously measured after N addition during the growing season in a Chinese pine forest. Four levels of N addition, i.e. no added N (N0: 0 g N m -2  year -1 ), low-N (N1: 5 g N m -2  year -1 ), medium-N (N2: 10 g N m -2  year -1 ), and high-N (N3: 15 g N m -2  year -1 ), and three organic matter treatments, i.e. both aboveground litter and belowground root removal (LRE), only aboveground litter removal (LE), and intact soil (CK), were examined. The Rs was measured continuously for 3 days following each N addition application and was measured approximately 3-5 times during the rest of each month from July to October 2012. N addition inhibited microbial heterotrophic respiration by suppressing soil microbial biomass, but stimulated root respiration and CO 2 release from litter decomposition by increasing either root biomass or microbial biomass. When litter and/or root were removed, the "priming" effect of N addition on the Rs disappeared more quickly than intact soil. This is likely to provide a point of view for why Rs varies so much in response to exogenous N and also has implications for future determination of sampling interval of Rs measurement.

Highly reduced mass loss rates and increased litter layer in radioactively contaminated areas.

PubMed

Mousseau, Timothy A; Milinevsky, Gennadi; Kenney-Hunt, Jane; Møller, Anders Pape

2014-05-01

The effects of radioactive contamination from Chernobyl on decomposition of plant material still remain unknown. We predicted that decomposition rate would be reduced in the most contaminated sites due to an absence or reduced densities of soil invertebrates. If microorganisms were the main agents responsible for decomposition, exclusion of large soil invertebrates should not affect decomposition. In September 2007 we deposited 572 bags with uncontaminated dry leaf litter from four species of trees in the leaf litter layer at 20 forest sites around Chernobyl that varied in background radiation by more than a factor 2,600. Approximately one quarter of these bags were made of a fine mesh that prevented access to litter by soil invertebrates. These bags were retrieved in June 2008, dried and weighed to estimate litter mass loss. Litter mass loss was 40% lower in the most contaminated sites relative to sites with a normal background radiation level for Ukraine. Similar reductions in litter mass loss were estimated for individual litter bags, litter bags at different sites, and differences between litter bags at pairs of neighboring sites differing in level of radioactive contamination. Litter mass loss was slightly greater in the presence of large soil invertebrates than in their absence. The thickness of the forest floor increased with the level of radiation and decreased with proportional loss of mass from all litter bags. These findings suggest that radioactive contamination has reduced the rate of litter mass loss, increased accumulation of litter, and affected growth conditions for plants.

Changes in litter near an aluminum reduction plant

USGS Publications Warehouse

Beyer, W.N.; Fleming, W.J.; Swineford, D.

1987-01-01

Litter was collected from eight sites at distances as far as 33 km from an AI reduction plant in western Tennessee. As a result of an accumulation of fine litter (< 4.75 mm) the weight of the litter per unit area was abnormally high at the two sites within 2 km of the plant. Compared to litter collected far from the plant, it had a lower fiber content, was more sapric, and was less acid. Fluoride emissions from the plant were suggested as the probable cause of litter changes. Concentrations of water-extractable and acid-extractable F- in the litter, the 0- to 5-cm soil layer, and the 5- to 15-cm soil layer were strongly correlated with distance from the plant. Total acid-extractable F- in the litter and upper 15 cm of soil was about 41 times as much at the closest site (700 mg/kg) as at the most distant sites (12 and 16 mg/kg). In a bioassay of litter from our study sites, woodlice (Porcellio scaber Latr.) had an abnormally high mortality in litter that contained 440 mg/kg or more of acid-extractable F-. However, when F- was added as NaF to litter, a significant increase in mortality was observed only in treatments exceeding 800 mg/kg. The decrease in the rate of decomposition of the litter might eventually induce a deficiency of soil macronutrients, but none was detected.

Effects of elevated CO2 on soil organic matter turnover and plant nitrogen uptake: First results from a dual labeling mesocosm experiment

NASA Astrophysics Data System (ADS)

Eder, Lucia Muriel; Weber, Enrico; Schrumpf, Marion; Zaehle, Sönke

2017-04-01

The response of plant growth to elevated concentrations of CO2 (eCO2) is often constrained by plant nitrogen (N) uptake. To overcome potential N limitation, plants may invest photosynthetically fixed carbon (C) into N acquiring strategies, including fine root biomass, root exudation, or C allocation to mycorrhizal fungi. In turn, these strategies may affect the decomposition of soil organic matter, leading to uncertainties in net effects of eCO2 on C storage. To gain more insight into these plant-soil C-N-interactions, we combined C and N stable isotope labeling in a mesocosm experiment. Saplings of Fagus sylvatica L. were exposed to a 13CO2 enriched atmosphere at near ambient (380 ppm) or elevated (550 ppm) CO2 concentrations for four months of the vegetation period in 2016. Aboveground and belowground net CO2 fluxes were measured separately and the 13C label enabled partitioning of total soil CO2 efflux into old, soil derived and new, plant-derived C. We used ingrowth cores to assess effects of eCO2on belowground C allocation and plant N uptake in more detail and in particular we evaluated the relative importance of ectomycorrhizal associations. In the soil of each sapling, ingrowth cores with different mesh sizes allowed fine roots or only mycorrhizal hyphae to penetrate. In one type of ingrowth core each, we incorporated fine root litter that was enriched in 15N. Additionally, total N uptake was estimated by using 15N enriched saplings and unlabeled control plants. We found that eCO2 increased aboveground net CO2 exchange rates by 19% and total soil respiration by 11%. The eCO2 effect for GPP and also for NPP was positive (+23% and +11%, respectively). By combining gaseous C fluxes with data on new and old C stocks in bulk soil and plants through destructive harvesting in late autumn 2016, we will be able to infer net effects of eCO2 on the fate of C in these mesocosms. Biomass allocation patterns can reveal physiological responses to high C availability under potentially constrained N availability. Together with data on biomass production within the ingrowth cores these results elucidate mechanisms affecting soil C storage and plant N uptake under eCO2.

Carbon Fluxes at the AmazonFACE Research Site

NASA Astrophysics Data System (ADS)

Norby, R.; De Araujo, A. C.; Cordeiro, A. L.; Fleischer, K.; Fuchslueger, L.; Garcia, S.; Hofhansl, F.; Garcia, M. N.; Grandis, A.; Oblitas, E.; Pereira, I.; Pieres, N. M.; Schaap, K.; Valverde-Barrantes, O.

2017-12-01

The free-air CO2 enrichment (FACE) experiment to be implemented in the Amazon rain forest requires strong pretreatment characterization so that eventual responses to elevated CO2 can be detected against a background of substantial species diversity and spatial heterogeneity. Two 30-m diameter plots have been laid out for initial characterization in a 30-m tall, old-growth, terra firme forest. Intensive measurements have been made of aboveground tree growth, leaf area, litter production, and fine-root production; these data sets together support initial estimates of plot-scale net primary productivity (NPP). Leaf-level measurements of photosynthesis throughout the canopy and over a daily time course in both the wet and dry season, coupled with meterological monitoring, support an initial estimate of gross primary productivity (GPP) and carbon-use efficiency (CUE = NPP/GPP). Monthly monitoring of CO2 efflux from the soil, partitioned into autotrophic and heterotrophic components, supports an estimate of net ecosystem production (NEP). Our estimate of NPP in the two plots (1.2 and 1.4 kg C m-2 yr-1) is 16-38% greater than previously reported for the site, primarily due to our more complete documentation of fine-root production, including root production deeper than 30 cm. The estimate of CUE of the ecosystem (0.52) is greater than most others in Amazonia; this discrepancy reflects large uncertainty in GPP, which derived from just two days of measurement, or to underestimates of the fine-root component of NPP in previous studies. Estimates of NEP (0 and 0.14 kg C m-2 yr-1) are generally consistent with a landscape-level estimate from flux tower data. Our C flux estimates, albeit very preliminary, provide initial benchmarks for a 12-model a priori evaluation of this forest. The model means of GPP, NPP, and NEP are mostly consistent with our field measurements. Predictions of C flux responses to elevated CO2 from the models become hypotheses to be tested in the FACE experiment. Although carbon fluxes on small plots cannot be expected to represent the fluxes across the wider and more diverse region, our integrated measurements, coupled with a model framework, provide a strong foundation for understanding the mechanistic basis of responses and for extending results of experimental CO2 fertilization to the wider region.

Carbon Allocation into Different Fine-Root Classes of Young Abies alba Trees Is Affected More by Phenology than by Simulated Browsing

PubMed Central

Endrulat, Tina; Buchmann, Nina; Brunner, Ivano

2016-01-01

Abies alba (European silver fir) was used to investigate possible effects of simulated browsing on C allocation belowground by 13CO2 pulse-labelling at spring, summer or autumn, and by harvesting the trees at the same time point of the labelling or at a later season for biomass and for 13C-allocation into the fine-root system. Before budburst in spring, the leader shoots and 50% of all lateral shoots of half of the investigated 5-year old Abies alba saplings were clipped to simulate browsing. At harvest, different fine-root classes were separated, and starch as an important storage compartment was analysed for concentrations. The phenology had a strong effect on the allocation of the 13C-label from shoots to roots. In spring, shoots did not supply the fine-roots with high amounts of the 13C-label, because the fine-roots contained less than 1% of the applied 13C. In summer and autumn, however, shoots allocated relatively high amounts of the 13C-label to the fine roots. The incorporation of the 13C-label as structural C or as starch into the roots is strongly dependent on the root type and the root diameter. In newly formed fine roots, 3–5% of the applied 13C was incorporated, whereas 1–3% in the ≤0.5 mm root class and 1–1.5% in the >0.5–1.0 mm root class were recorded. Highest 13C-enrichment in the starch was recorded in the newly formed fine roots in autumn. The clipping treatment had a significant positive effect on the amount of allocated 13C-label to the fine roots after the spring labelling, with high relative 13C-contents observed in the ≤0.5 mm and the >0.5–1.0 mm fine-root classes of clipped trees. No effects of the clipping were observed after summer and autumn labelling in the 13C-allocation patterns. Overall, our data imply that the season of C assimilation and, thus, the phenology of trees is the main determinant of the C allocation from shoots to roots and is clearly more important than browsing. PMID:27123860

Carbon Allocation into Different Fine-Root Classes of Young Abies alba Trees Is Affected More by Phenology than by Simulated Browsing.

PubMed

Endrulat, Tina; Buchmann, Nina; Brunner, Ivano

2016-01-01

Abies alba (European silver fir) was used to investigate possible effects of simulated browsing on C allocation belowground by 13CO2 pulse-labelling at spring, summer or autumn, and by harvesting the trees at the same time point of the labelling or at a later season for biomass and for 13C-allocation into the fine-root system. Before budburst in spring, the leader shoots and 50% of all lateral shoots of half of the investigated 5-year old Abies alba saplings were clipped to simulate browsing. At harvest, different fine-root classes were separated, and starch as an important storage compartment was analysed for concentrations. The phenology had a strong effect on the allocation of the 13C-label from shoots to roots. In spring, shoots did not supply the fine-roots with high amounts of the 13C-label, because the fine-roots contained less than 1% of the applied 13C. In summer and autumn, however, shoots allocated relatively high amounts of the 13C-label to the fine roots. The incorporation of the 13C-label as structural C or as starch into the roots is strongly dependent on the root type and the root diameter. In newly formed fine roots, 3-5% of the applied 13C was incorporated, whereas 1-3% in the ≤0.5 mm root class and 1-1.5% in the >0.5-1.0 mm root class were recorded. Highest 13C-enrichment in the starch was recorded in the newly formed fine roots in autumn. The clipping treatment had a significant positive effect on the amount of allocated 13C-label to the fine roots after the spring labelling, with high relative 13C-contents observed in the ≤0.5 mm and the >0.5-1.0 mm fine-root classes of clipped trees. No effects of the clipping were observed after summer and autumn labelling in the 13C-allocation patterns. Overall, our data imply that the season of C assimilation and, thus, the phenology of trees is the main determinant of the C allocation from shoots to roots and is clearly more important than browsing.

Scale-dependent effects of nonnative plant invasion on host-seeking tick abundance

PubMed Central

Adalsteinsson, Solny A.; D’Amico, Vincent; Shriver, W. Gregory; Brisson, Dustin; Buler, Jeffrey J.

2016-01-01

Nonnative, invasive shrubs can affect human disease risk through direct and indirect effects on vector populations. Multiflora rose (Rosa multiflora) is a common invader within eastern deciduous forests where tick-borne disease (e.g. Lyme disease) rates are high. We tested whether R. multiflora invasion affects blacklegged tick (Ixodes scapularis) abundance, and at what scale. We sampled host-seeking ticks at two spatial scales: fine-scale, within R. multiflora-invaded forest fragments; and patch scale, among R. multiflora-invaded and R. multiflora-free forest fragments. At a fine scale, we trapped 2.3 times more ticks under R. multiflora compared to paired traps 25 m away from R. multiflora. At the patch scale, we trapped 3.2 times as many ticks in R. multiflora-free forests compared to R. multiflora-invaded forests. Thus, ticks are concentrated beneath R. multiflora within invaded forests, but uninvaded forests support significantly more ticks. Among all covariates tested, leaf litter volume was the best predictor of tick abundance; at the patch scale, R. multiflora-invaded forests had less leaf litter than uninvaded forests. We suggest that leaf litter availability at the patch-scale plays a greater role in constraining tick abundance than the fine-scale, positive effect of invasive shrubs. PMID:27088044

Fine root architecture of nine North American trees

Treesearch

Kurt S. Pregitzer; Jared L. DeForest; Andrew J. Burton; Michael F. Allen; Roger W. Ruess; Ronald L. Hendrick

2002-01-01

The fine roots of trees are concentrated on lateral branches that arise from perennial roots. They are important in the acquisition of water and essential nutrients, and at the ecosystem level, they make a significant contribution to biogeochemical cycling. Fine roots have often been studied according to arbitrary size classes, e.g., all roots less than 1 or 2 mm in...

Interacting Microbe and Litter Quality Controls on Litter Decomposition: A Modeling Analysis

PubMed Central

Moorhead, Daryl; Lashermes, Gwenaëlle; Recous, Sylvie; Bertrand, Isabelle

2014-01-01

The decomposition of plant litter in soil is a dynamic process during which substrate chemistry and microbial controls interact. We more clearly quantify these controls with a revised version of the Guild-based Decomposition Model (GDM) in which we used a reverse Michaelis-Menten approach to simulate short-term (112 days) decomposition of roots from four genotypes of Zea mays that differed primarily in lignin chemistry. A co-metabolic relationship between the degradation of lignin and holocellulose (cellulose+hemicellulose) fractions of litter showed that the reduction in decay rate with increasing lignin concentration (LCI) was related to the level of arabinan substitutions in arabinoxylan chains (i.e., arabinan to xylan or A∶X ratio) and the extent to which hemicellulose chains are cross-linked with lignin in plant cell walls. This pattern was consistent between genotypes and during progressive decomposition within each genotype. Moreover, decay rates were controlled by these cross-linkages from the start of decomposition. We also discovered it necessary to divide the Van Soest soluble (labile) fraction of litter C into two pools: one that rapidly decomposed and a second that was more persistent. Simulated microbial production was consistent with recent studies suggesting that more rapidly decomposing materials can generate greater amounts of potentially recalcitrant microbial products despite the rapid loss of litter mass. Sensitivity analyses failed to identify any model parameter that consistently explained a large proportion of model variation, suggesting that feedback controls between litter quality and microbial activity in the reverse Michaelis-Menten approach resulted in stable model behavior. Model extrapolations to an independent set of data, derived from the decomposition of 12 different genotypes of maize roots, averaged within <3% of observed respiration rates and total CO2 efflux over 112 days. PMID:25264895

Chemical manipulation of soil biota in a fescue meadow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Malone, C. R.; Reichle, D. E.

Formalin, phorate, and sodium chlorate were used in field enclosures to create artificial habitats in a fescue meadow containing (1) reduced number of earthworms, (2) reduced numbers of earthworms and soil arthropods, and (3) reduction of total soil fauna and rate of microbial decomposition. Under these conditions, confined fescue litter initially decomposed more rapidly where arthropods or earthworms were suppressed than in controls with full complements of soil animals. After one year, reduction in numbers of soil animals had no net effect on litter decomposition, with faunal activity apparently having been compensated for by increased microbial activity. Where animals andmore » microbial activity were reduced, rate of litter loss was depressed initially but recovered after 10 months as the effects of chemical suppression of microbial populations subsided. Contrary to the effects on annual loss of litter, elimination of all or portions of the soil fauna depressed rates of loss of confined and buried roots, reflecting the role of animals in fragmenting roots before their decomposition by microorganisms. Habitat manipulations had pronounced effects on the mobility of 134Cs, and loss of the radionuclide from labelled litter was retarded despite an accelerated rate of decomposition. This effect apparently was associated with proliferation of microorganisms on litter and microbial immobilization of the radionuclide. Immobilization of 134Cs occurred following chemical perturbations, but only after an initial period of rapid loss resulting from increased microbial activity. Distribution of 134Cs in soil beneath tagged litter bags reflected the role of animals in element redistribution within soil. Finally, restricted vertical mobility of the nuclide occurred except where chemical application killed vegetation within the experimental enclosures.« less

Belowground effects of enhanced tropospheric ozone and drought in a beech/spruce forest (Fagus sylvatica L./Picea abies [L.] Karst).

PubMed

Nikolova, Petia S; Andersen, Christian P; Blaschke, Helmut; Matyssek, Rainer; Häberle, Karl-Heinz

2010-04-01

The effects of experimentally elevated O(3) on soil respiration rates, standing fine-root biomass, fine-root production and delta(13)C signature of newly produced fine roots were investigated in an adult European beech/Norway spruce forest in Germany during two subsequent years with contrasting rainfall patterns. During humid 2002, soil respiration rate was enhanced under elevated O(3) under beech and spruce, and was related to O(3)-stimulated fine-root production only in beech. During dry 2003, the stimulating effect of O(3) on soil respiration rate vanished under spruce, which was correlated with decreased fine-root production in spruce under drought, irrespective of the O(3) regime. delta(13)C signature of newly formed fine-roots was consistent with the differing g(s) of beech and spruce, and indicated stomatal limitation by O(3) in beech and by drought in spruce. Our study showed that drought can override the stimulating O(3) effects on fine-root dynamics and soil respiration in mature beech and spruce forests. 2009 Elsevier Ltd. All rights reserved.

BOREAS TE-19 Ecosystem Carbon Balance Model

NASA Technical Reports Server (NTRS)

Hall, Forrest G. (Editor); Papagno, Andrea (Editor); Frolking, Steve

2000-01-01

The BOREAS TE-19 team developed a model called the Spruce and Moss Model (SPAM) designed to simulate the daily carbon balance of a black spruce/moss boreal forest ecosystem. It is driven by daily weather conditions, and consists of four components: (1) soil climate, (2) tree photosynthesis and respiration, (3) moss photosynthesis and respiration, and (4) litter decomposition and associated heterotrophic respiration. The model simulates tree gross and net photosynthesis, wood respiration, live root respiration, moss gross and net photosynthesis, and heterotrophic respiration (decomposition of root litter, young needle and moss litter, and humus). These values can be combined to generate predictions of total site net ecosystem exchange of carbon (NEE), total soil dark respiration (live roots + heterotrophs + live moss), spruce and moss net productivity, and net carbon accumulation in the soil. To date, simulations have been of the BOREAS NSA-OBS and SSA-OBS tower sites, from 1968-95 (except 1990-93). The files include source code and sample input and output files in ASCII format. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Activity Archive Center (DAAC).

Broiler litter as a micronutrient source for cotton: concentrations in plant parts.

PubMed

Tewolde, H; Sistani, K R; Rowe, D E

2005-01-01

Analytically, poultry litter contains nearly all essential micronutrients but the extent of phytoavailability of these nutrients and whether cotton (Gossypium hirsutum L.) and other crop plants can receive adequate amounts of these nutrients from litter is not fully known. The objective of this research was to determine whether cotton receives sufficient amounts of Fe, Cu, Mn, and Zn from litter and estimate the efficiency of cotton in extracting these metal nutrients from litter in the absence of any other source of the micronutrients. The greenhouse research used plastic pots filled with approximately 11 kg of a 2:1 (v/v) sand to vermiculite growing mix. Cotton (cv. Stoneville 474) was grown in the pots fertilized with broiler litter at rates of 30, 60, 90, or 120 g pot(-1) in a factorial combination with four supplemental nutrient solution (NS) treatments. The nutrient solutions consisted of full Hoagland's nutrient solution (NS-full); a solution of the macronutrients N, P, K, Ca, and Mg (NS-macro); a solution of the micronutrients Fe, Zn, Mn, Cu, B, and Mo (NS-micro); and water (NS-none). Based on tissue nutrient analysis, a one-time broiler litter application supplied adequate amounts of Fe, Cu, and Mn to bring the concentration of these nutrients in upper leaves within published sufficiency ranges. Zinc, with <17 mg kg(-1) concentration in the upper leaves, was the only micronutrient below the established sufficiency range regardless of the rate of applied litter. Cotton extracted Fe and Mn more efficiently than Cu or Zn, removing as much as 8.8% of Fe and 7.2% of Mn supplied by 30 g litter pot(-1). In contrast, the extraction efficiency was 1.7% for Cu and 1.9% for Zn. Roots accumulated 58% of the total absorbed Fe and 64% of Cu, and leaves accumulated 32% of the Fe and only 13% of the Cu supplied by litter. In contrast, only 16% of the total absorbed Mn and 23% of Zn accumulated in roots while leaves accumulated 64% of the total Mn and 37% of Zn. These results demonstrate that broiler litter is a valuable source of the metal nutrients supplying Fe, Cu, and Mn in full and Zn in part, but a very large fraction of the litter-supplied metal nutrients remained in the growing mix.

Fine-root growth in a forested bog is seasonally dynamic, but shallowly distributed in nutrient-poor peat

DOE PAGES

Iversen, Colleen M.; Childs, Joanne; Norby, Richard J.; ...

2017-03-30

Fine roots contribute to ecosystem carbon, water, and nutrient fluxes through resource acquisition, respiration, exudation, and turnover, but are understudied in peatlands. Here, we aimed to determine how the amount and timing of fine-root growth in a forested, ombrotrophic bog varied across gradients of vegetation density, peat microtopography, and changes in environmental conditions across the growing season and throughout the peat profile. We quantified fine-root peak standing crop and growth using non-destructive minirhizotron technology over a two-year period, focusing on the dominant woody species in the bog: Picea mariana, Larix laricina, Rhododendron groenlandicum, and Chamaedaphne calyculata. The fine roots ofmore » trees and shrubs were concentrated in raised hummock microtopography, with more tree roots associated with greater tree densities and a unimodal peak in shrub roots at intermediate tree densities. Fine-root growth tended to be seasonally dynamic, but shallowly distributed, in a thin layer of nutrient-poor, aerobic peat above the growing season water table level. Finally, the dynamics and distribution of fine roots in this forested ombrotrophic bog varied across space and time in response to biological, edaphic, and climatic conditions, and we expect these relationships to be sensitive to projected environmental changes in northern peatlands.« less

Fine-root growth in a forested bog is seasonally dynamic, but shallowly distributed in nutrient-poor peat

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iversen, Colleen M.; Childs, Joanne; Norby, Richard J.

Fine roots contribute to ecosystem carbon, water, and nutrient fluxes through resource acquisition, respiration, exudation, and turnover, but are understudied in peatlands. Here, we aimed to determine how the amount and timing of fine-root growth in a forested, ombrotrophic bog varied across gradients of vegetation density, peat microtopography, and changes in environmental conditions across the growing season and throughout the peat profile. We quantified fine-root peak standing crop and growth using non-destructive minirhizotron technology over a two-year period, focusing on the dominant woody species in the bog: Picea mariana, Larix laricina, Rhododendron groenlandicum, and Chamaedaphne calyculata. The fine roots ofmore » trees and shrubs were concentrated in raised hummock microtopography, with more tree roots associated with greater tree densities and a unimodal peak in shrub roots at intermediate tree densities. Fine-root growth tended to be seasonally dynamic, but shallowly distributed, in a thin layer of nutrient-poor, aerobic peat above the growing season water table level. Finally, the dynamics and distribution of fine roots in this forested ombrotrophic bog varied across space and time in response to biological, edaphic, and climatic conditions, and we expect these relationships to be sensitive to projected environmental changes in northern peatlands.« less

Elevated root retention of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in coniferous trees.

PubMed

Schoenmuth, Bernd; Mueller, Jakob O; Scharnhorst, Tanja; Schenke, Detlef; Büttner, Carmen; Pestemer, Wilfried

2014-03-01

For decades, the explosive RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) has been used for military and industrial applications. Residues of RDX pollute soils in large areas globally and the persistence and high soil mobility of these residues can lead to leaching into groundwater. Dendroremediation, i.e. the long-term use of trees to clean up polluted soils, is gaining acceptance as a green and sustainable strategy. Although the coniferous tree species Norway spruce and Scots pine cover large areas of military land in Central Europe, the potential of any coniferous tree for dendroremediation of RDX is still unknown. In this study, uptake experiments with a (14)C-labelled RDX solution (30 mg L(-1)) revealed that RDX was predominantly retained in the roots of 6-year-old coniferous trees. Only 23 % (pine) to 34 % (spruce) of RDX equivalents (RDXeq) taken up by the roots were translocated to aboveground tree compartments. This finding contrasts with the high aerial accumulation of RDXeq (up to 95 %) in the mass balances of all other plant species. Belowground retention of RDXeq is relatively stable in fine root fractions, since water leaching from tissue homogenates was less than 5 %. However, remobilisation from milled coarse roots and tree stubs reached up to 53 %. Leaching from homogenised aerial tree material was found to reach 64 % for needles, 58 % for stems and twigs and 40 % for spring sprouts. Leaching of RDX by precipitation increases the risk for undesired re-entry into the soil. However, it also opens the opportunity for microbial mineralisation in the litter layer or in the rhizosphere of coniferous forests and offers a chance for repeated uptake of RDX by the tree roots.

Stable isotope ratios of nonexchangeable hydrogen in organic matter of soils and plants along a 2100-km climosequence in Argentina: New insights into soil organic matter sources and transformations?

NASA Astrophysics Data System (ADS)

Ruppenthal, Marc; Oelmann, Yvonne; del Valle, Héctor Francisco; Wilcke, Wolfgang

2015-03-01

The quantitative contribution of shoot and root organic matter (OM) to the soil carbon (C) stock is still unknown, mainly because of methodological restrictions. The novel measurement of the nonexchangeable hydrogen (H) stable isotope ratio (δ2Hn) in bulk OM provides new opportunities to investigate the sources of soil C and its climate-dependent transformations. Our objectives were to test whether (I) there are systematic differences between δ2Hn values of aboveground and belowground plant OM and (II) δ2Hn values of litter and soil OM relate to climate and plant OM source δ2Hn signals. We determined δ2Hn values of bulk shoot, root, litter and demineralized soil OM from 20 sampling sites along a 2100-km climosequence from the Argentinean Pampas to the Patagonian steppe. The δ2Hn values of shoot and litter OM correlated closely with the aridity index (r = -0.83, p < 0.001 and r = -0.78, p < 0.001, respectively) because of H isotope fractionation during aridity-controlled transpiration in shoots. In contrast, δ2Hn values of root and soil OM showed a close correlation with modeled mean annual δ2H values of local precipitation (r = 0.91, p < 0.001 and r = 0.97, p < 0.001, respectively, root mean square error of 8.2‰ and 7.2‰, respectively) and thus mean annual temperature (r = 0.80, p < 0.001 and r = 0.88, p < 0.001, respectively). δ2Hn values of shoot and root OM differed markedly (no linear correlation) most likely because of biosynthetic exchange of C-bound H with ambient water in the roots. δ2Hn values of root and demineralized soil OM, however, were closely correlated (r = 0.91, p < 0.001) with a constant offset irrespective of climatic conditions, suggesting that root OM was a more important source of soil OM than shoot OM. A possible contribution of shoot OM to soil OM could only be explained if shoot OM underwent biosynthetic exchange of C-bound H with ambient water in soil during microbial and fungal decomposition. This mechanism is known for substrates processed through the microbial and fungal glycolysis-gluconeogenesis metabolic pathways. Our modeling suggested that the δ2Hn signature of soil OM is best explained under the assumption that root OM is the predominant source of soil OM, rather than shoot and litter OM.

Adaptive fine root foraging patterns in climate experiments and natural gradients

NASA Astrophysics Data System (ADS)

Ostonen, Ivika; Truu, Marika; Parts, Kaarin; Truu, Jaak

2017-04-01

Site based manipulative experiments and studies along climatic gradients have long been keystones of ecological research. We aimed to compare the response of ectomycorrhizal (EcM) and fine roots in manipulative studies and along climate gradient to describe the universal trends in root traits and to raise hypotheses about general mechanisms in fine root system adaptation of forest trees in global change. The root traits from two climate manipulation experiments - Bangor FACE and FAHM in Estonia, manipulated by CO2 concentration and relative air humidity in silver birch forest ecosystems, respectively and the data for three most ubiquitous tree species - Norway spruce (Picea abies), Scots pine (Pinus sylvestris) and silver birch (Betula pendula) stands along natural gradient encompassing different climate and forest zones in Northern Europe were analysed. There are two main strategies in response of fine root system of trees: A) an extensive increase in absorptive root biomass, surface area and length, or B) a greater reliance on root-associated EcM fungi and bacterial communities with a smaller investment to absorptive root biomass. Trees in all studies tended to increase the EcM root biomass and the proportion of EcM root biomass of total fine root biomass towards harsh (northern boreal forests) or changed conditions (stress created by the increase in CO2 concentration or relative air humidity). We envisage a role of trilateral relation between the morphological traits of absorptive fine roots, exploration types of colonising EcM fungi and rhizosphere and bulk soil bacterial community structure. A significant change in EcM absorptive fine root biomass in all experiments and for all studied tree species coincided with changes in absorptive root morphology, being longer and thinner root tips with higher root tissue density in poor/treated sites. These changes were associated with significant shifts in community structure of dominating EcM fungi as well as soil and rhizosphere bacterial communities. We suggest a multidimensional concept of absorptive fine root foraging strategies involving both qualitative and quantitative changes in root-mycorhizosphere along environmental gradients and in climate experiments.

Elevated CO2 or O3 effects on fine-root survivorship in ponderosa pine

EPA Science Inventory

Atmospheric carbon dioxide (CO2) and ozone (O3) concentrations are rising, which may have opposing effects on tree C balance and allocation to fine roots. More information is needed on interactive CO2 and O3 effects on roots, particularly fine-root life span, a critical demograp...

ELEVATED CO2 AND O3 EFFECTS ON FINE-ROOT SURVIVORSHIP IN PONDEROSA PINE MESOCOSMS

EPA Science Inventory

Atmospheric carbon dioxide (CO2) and ozone (O3) concentrations are rising, which may have opposing effects on tree C balance and allocation to fine roots. More information is needed on interactive CO2 and O3 effects on roots, particularly fine-root life span, a critical demograph...

Application of ground-based LIDAR for fine-scale forest fuel modeling

Treesearch

E. Louise Loudermilk; Abhinav Singhania; Juan C. Fernandez; J. Kevin Hiers; Joseph J. O' Brien; Wendell P. Cropper Jr.; K. Clint Slatton; Robert J. Mitchell

2007-01-01

Frequent (1 to 5 year) low intensity fire regimes of longleaf pine (Pinus palustris) savannas of the Southeastern United States create a continuous fuelbed of understory grasses, forbs, flammable pine needle litter, with interstitial hardwood shrubs. Measuring the spatial heterogeneity of these fine-fuels can be difficult, requiring intensive field...

Fine root dynamics in lodgepole pine and white spruce stands along productivity gradients in reclaimed oil sands sites.

PubMed

Jamro, Ghulam Murtaza; Chang, Scott X; Naeth, M Anne; Duan, Min; House, Jason

2015-10-01

Open-pit mining activities in the oil sands region of Alberta, Canada, create disturbed lands that, by law, must be reclaimed to a land capability equivalent to that existed before the disturbance. Re-establishment of forest cover will be affected by the production and turnover rate of fine roots. However, the relationship between fine root dynamics and tree growth has not been studied in reclaimed oil sands sites. Fine root properties (root length density, mean surface area, total root biomass, and rates of root production, turnover, and decomposition) were assessed from May to October 2011 and 2012 using sequential coring and ingrowth core methods in lodgepole pine (Pinus contorta Dougl.) and white spruce (Picea glauca (Moench.) Voss) stands. The pine and spruce stands were planted on peat mineral soil mix placed over tailings sand and overburden substrates, respectively, in reclaimed oil sands sites in Alberta. We selected stands that form a productivity gradient (low, medium, and high productivities) of each tree species based on differences in tree height and diameter at breast height (DBH) increments. In lodgepole pine stands, fine root length density and fine root production, and turnover rates were in the order of high > medium > low productivity sites and were positively correlated with tree height and DBH and negatively correlated with soil salinity (P < 0.05). In white spruce stands, fine root surface area was the only parameter that increased along the productivity gradient and was negatively correlated with soil compaction. In conclusion, fine root dynamics along the stand productivity gradients were closely linked to stand productivity and were affected by limiting soil properties related to the specific substrate used for reconstructing the reclaimed soil. Understanding the impact of soil properties on fine root dynamics and overall stand productivity will help improve land reclamation outcomes.

The role of organic matter as a source of nitrogen in Douglas-fir forest soils.

Treesearch

Robert F. Tarrant

1948-01-01

The organic material supplied the forest soil by deposits of needles, deadwood and roots, and soil insect remains, decomposes to form humus, defined as the plant and animal residues of the soil, fresh surface litter excluded, which are undergoing evident decomposition (2). This decomposition is necessary before the nutrient elements contained in the organic litter can...

ADVANCING FINE ROOT RESEARCH WITH MINIRHIZOTRONS

EPA Science Inventory

Minirhizotrons provide a nondestructive, in situ method for directly viewing and studying fine roots. Although many insights into fine roots have been gained using minirhizotrons, it is clear from the literature that there is still wide variation in how minirhizotrons and minirhi...

Ground penetrating radar (GPR) detects fine roots of agricultural crops in the field

Treesearch

Xiuwei Liu; Xuejun Dong; Qingwu Xue; Daniel I. Leskovar; John Jifon; John R. Butnor; Thomas Marek

2018-01-01

Aim Ground penetrating radar (GPR) as a non-invasive technique is widely used in coarse root detection. However, the applicability of the technique to detect fine roots of agricultural crops is unknown. The objective of this study was to assess the feasibility of utilizing GPR to detect fine roots in the field.

Mechanical Failure of Fine Root Cortical Cells Initiates Plant Hydraulic Decline during Drought.

PubMed

Cuneo, Italo F; Knipfer, Thorsten; Brodersen, Craig R; McElrone, Andrew J

2016-11-01

Root systems perform the crucial task of absorbing water from the soil to meet the demands of a transpiring canopy. Roots are thought to operate like electrical fuses, which break when carrying an excessive load under conditions of drought stress. Yet the exact site and sequence of this dysfunction in roots remain elusive. Using in vivo x-ray computed microtomography, we found that drought-induced mechanical failure (i.e. lacunae formation) in fine root cortical cells is the initial and primary driver of reduced fine root hydraulic conductivity (Lp r ) under mild to moderate drought stress. Cortical lacunae started forming under mild drought stress (-0.6 MPa Ψ stem ), coincided with a dramatic reduction in Lp r , and preceded root shrinkage or significant xylem embolism. Only under increased drought stress was embolism formation observed in the root xylem, and it appeared first in the fine roots (50% loss of hydraulic conductivity [P 50 ] reached at -1.8 MPa) and then in older, coarse roots (P 50 = -3.5 MPa). These results suggest that cortical cells in fine roots function like hydraulic fuses that decouple plants from drying soil, thus preserving the hydraulic integrity of the plant's vascular system under early stages of drought stress. Cortical lacunae formation led to permanent structural damage of the root cortex and nonrecoverable Lp r , pointing to a role in fine root mortality and turnover under drought stress. © 2016 American Society of Plant Biologists. All Rights Reserved.

Drought effects on fine-root and ectomycorrhizal-root biomass in managed Pinus oaxacana Mirov stands in Oaxaca, Mexico.

PubMed

Valdés, María; Asbjornsen, Heidi; Gómez-Cárdenas, Martín; Juárez, Margarita; Vogt, Kristiina A

2006-03-01

The effects of a severe drought on fine-root and ectomycorrhizal biomass were investigated in a forest ecosystem dominated by Pinus oaxacana located in Oaxaca, Mexico. Root cores were collected during both the wet and dry seasons of 1998 and 1999 from three sites subjected to different forest management treatments in 1990 and assessed for total fine-root biomass and ectomycorrhizal-root biomass. Additionally, a bioassay experiment with P. oaxacana seedlings was conducted to assess the ectomycorrhizal inoculum potential of the soil for each of the three stands. Results indicated that biomasses of both fine roots and ectomycorrhizal roots were reduced by almost 60% in the drought year compared to the nondrought year. There were no significant differences in ectomycorrhizal and fine-root biomass between the wet and dry seasons. Further, the proportion of total root biomass consisting of ectomycorrhizal roots did not vary between years or seasons. These results suggest that both total fine-root biomass and ectomycorrhizal-root biomass are strongly affected by severe drought in these high-elevation tropical pine forests, and that these responses outweigh seasonal effects. Forest management practices in these tropical pine forests should consider the effects of drought on the capacity of P. oaxacana to maintain sufficient levels of ectomycorrhizae especially when there is a potential for synergistic interactions between multiple disturbances that may lead to more severe stress in the host plant and subsequent reductions in ectomycorrhizal colonization.

[Fine root biomass and production of four vegetation types in Loess Plateau, China].

PubMed

Deng, Qiang; Li, Ting; Yuan, Zhi-You; Jiao, Feng

2014-11-01

Fine roots (≤ 2 mm) play a major role in biogeochemical cycling in ecosystems. By the methods of soil cores and ingrowth soil cores, we studied the biomass and annual production of fine roots in 0-40 cm soil layers of four main vegetation types, i. e. , Robinia pseudoacacia plantation, deciduous shrubs, abandoned grassland, and Artemisia desertorum community in Loess Plateau, China. The spatial patterns of fine root biomass and production were negatively associated with latitudes. The fine root biomass in the 0-40 cm soil layer was in the order of deciduous shrubs (220 g · m(-2)), R. pseudoacacia plantation (163 g · m(-2)), abandoned grassland (162 g · m(-2)) and A. desertorum community (79 g · m(-2)). The proportion of ≤ 1 mm fine root biomass (74.1%) in the 0-40 cm soil layer of abandoned grassland was significantly higher than those in the other three vegetation types. The fine root biomass of the four vegetation types was mainly distributed in the 0-10 cm soil layer and decreased with soil depth. The proportion of fine root biomass (44.1%) in the 0-10 cm soil layer of abandoned grassland was significantly higher than those in other three vegetation types. The fine root productions of four vegetation types were in the order of abandoned grassland (315 g · m(-2) · a(-1)) > deciduous shrubs (249 g · m(-2) a(-1)) > R. pseudoacacia plantation (219 g · m(-2) · a(-1)) > A. desertorum community (115 g · m(-2) · a(-1)), and mainly concentrated in the 0-10 cm top soil layer and decreased with the soil depth. The proportion of the annual production (40.4%) in the 0-10 cm soil layer was the highest in abandoned grassland. Fine roots of abandoned grassland turned over faster than those from the other three vegetation types.

Effects of elevated CO2 on fine root dynamics in a Mojave Desert community: A FACE study

USGS Publications Warehouse

Phillips, D.L.; Johnson, M.G.; Tingey, D.T.; Catricala, C.E.; Hoyman, T.L.; Nowak, R.S.

2006-01-01

Fine roots (??? 1mm diameter) are critical in plant water and nutrient absorption, and it is important to understand how rising atmospheric CO2 will affect them as part of terrestrial ecosystem responses to global change. This study's objective was to determine effects of elevated CO2 on production, mortality, and standing crops of fine root length over 2 years in a free-air CO2 enrichment (FACE) facility in the Mojave Desert of southern Nevada, USA. Three replicate 25m diameter FACE rings were maintained at ambient (??? 370 ??mol mol-1) and elevated CO2 (??? 550 ??mol mol-1) atmospheric concentrations. Twenty-eight minirhizotron tubes were placed in each ring to sample three microsite locations: evergreen Larrea shrubs, drought-deciduous Ambrosia shrubs, and along systematic community transects (primarily in shrub interspaces which account for ??? 85% of the area). Seasonal dynamics were similar for ambient and elevated CO2: fine root production peaked in April-June, with peak standing crop occurring about 1 month later, and peak mortality occurring during the hot summer months, with higher values for all three measures in a wet year compared with a dry year. Fine root standing crop, production, and mortality were not significantly different between treatments except standing crop along community transects, where fine root length was significantly lower in elevated CO2. Fine root turnover (annual cumulative mortality/mean standing crop) ranged from 2.33 to 3.17 year-1, and was not significantly different among CO2 treatments, except for community transect tubes where it was significantly lower for elevated CO2. There were no differences in fine root responses to CO2 between evergreen (Larrea) and drought-deciduous (Ambrosia) shrubs. Combined with observations of increased leaf-level water-use efficiency and lack of soil moisture differences, these results suggest that under elevated CO2 conditions, reduced root systems (compared with ambient CO2) appear sufficient to provide resources for modest aboveground production increases across the community, but in more fertile shrub microsites, fine root systems of comparable size with those in ambient CO2 were required to support the greater aboveground production increases. For community transects, development of the difference in fine root standing crops occurred primarily through lower stimulation of fine root production in the elevated CO2 treatment during periods of high water availability. ?? 2005 Blackwell Publishing Ltd.

Building a better foundation: improving root-trait measurements to understand and model plant and ecosystem processes

DOE PAGES

McCormack, M. Luke; Guo, Dali; Iversen, Colleen M.; ...

2017-03-13

Trait-based approaches provide a useful framework to investigate plant strategies for resource acquisition, growth, and competition, as well as plant impacts on ecosystem processes. Despite significant progress capturing trait variation within and among stems and leaves, identification of trait syndromes within fine-root systems and between fine roots and other plant organs is limited. Here we discuss three underappreciated areas where focused measurements of fine-root traits can make significant contributions to ecosystem science. These include assessment of spatiotemporal variation in fine-root traits, integration of mycorrhizal fungi into fine-root-trait frameworks, and the need for improved scaling of traits measured on individual rootsmore » to ecosystem-level processes. Progress in each of these areas is providing opportunities to revisit how below-ground processes are represented in terrestrial biosphere models. Targeted measurements of fine-root traits with clear linkages to ecosystem processes and plant responses to environmental change are strongly needed to reduce empirical and model uncertainties. Further identifying how and when suites of root and whole-plant traits are coordinated or decoupled will ultimately provide a powerful tool for modeling plant form and function at local and global scales.« less

Building a better foundation: improving root-trait measurements to understand and model plant and ecosystem processes

DOE Office of Scientific and Technical Information (OSTI.GOV)

McCormack, M. Luke; Guo, Dali; Iversen, Colleen M.

Trait-based approaches provide a useful framework to investigate plant strategies for resource acquisition, growth, and competition, as well as plant impacts on ecosystem processes. Despite significant progress capturing trait variation within and among stems and leaves, identification of trait syndromes within fine-root systems and between fine roots and other plant organs is limited. Here we discuss three underappreciated areas where focused measurements of fine-root traits can make significant contributions to ecosystem science. These include assessment of spatiotemporal variation in fine-root traits, integration of mycorrhizal fungi into fine-root-trait frameworks, and the need for improved scaling of traits measured on individual rootsmore » to ecosystem-level processes. Progress in each of these areas is providing opportunities to revisit how below-ground processes are represented in terrestrial biosphere models. Targeted measurements of fine-root traits with clear linkages to ecosystem processes and plant responses to environmental change are strongly needed to reduce empirical and model uncertainties. Further identifying how and when suites of root and whole-plant traits are coordinated or decoupled will ultimately provide a powerful tool for modeling plant form and function at local and global scales.« less

Managing broiler litter application rate and grazing to decrease watershed runoff losses.

PubMed

Sistani, K R; Brink, G E; Oldham, J L

2008-01-01

Pasture management and broiler litter application rate are critical factors influencing the magnitude of nutrients being transported by runoff from fields. We investigated the impact of pasture management and broiler litter application rate on nutrient runoff from bermudagrass (Cynodon dactylon) pastures. The experiment was conducted on a Ruston fine sandy loam with a factorial arrangement on 21 large paddocks. Runoff water was collected from natural rainfall events from 2001 to 2003. Runoff water and soil samples were analyzed for nutrients and sediments. Runoff was generally greater (29%) from grazed than hayed pastures regardless of the litter application rate. There was greater inorganic N in the runoff from grazed paddocks when litter rate was based on N rather than P. The mean total P loss per runoff event for all treatments ranged from 7 to 45 g ha(-1) and the grazed treatment with litter applied on N basis had the greatest total P loss. Total dissolved P was the dominant P fraction in the runoff, ranging from 85% to 93% of the total P. The soluble reactive P was greater for treatments with litter applied on N basis regardless of pasture management. Runoff total sediments were greater for N-based litter application compared to those which received litter on P basis. Our results indicate that litter may be applied on N basis if the pasture is hayed and the soil P is low. In contrast, litter rates should be based on a P-basis if pasture is grazed.

Carbon cycling in fine roots of several mature forests: results using either locally-derived or bomb-derived radiocarbon enrichment

NASA Astrophysics Data System (ADS)

Gaudinski, J. B.; Riley, W. J.; Torn, M. S.; Dawson, T. E.; Trumbore, S. E.; Joslin, J. D.; Majdi, H.; Hanson, P. J.; Swanston, C.

2008-12-01

This work seeks to improve our ability to quantify C cycling rates in fine roots of trees in mature deciduous and coniferous forests. We use two different types of atmospheric 14CO2 enrichment to trace the time elapsed since C in plant tissues was fixed from the atmosphere by photosynthesis. The first uses a local enrichment of 14CO2 which occurred in early summer 1999, at the Oak Ridge Reservation, Tennessee. The second, employed at three different sites, uses the global enrichment in background atmospheric 14CO2 caused by thermonuclear weapons testing (bomb-14C). In both cases we employ a new model (Radix1.0) to track C and 14C fluxes through fine root populations. Radix simulates two live-root populations (the longer-lived one having structural and non-structural C components), two dead-root pools, non-normally distributed root mortality turnover times, a stored C pool, seasonal growth and respiration patterns, a best-fit to measurements approach to estimate model parameters, and Monte Carlo uncertainty analysis. Our results show that: (1) New fine-root growth contains a lot of stored C (~55%) but it is young in age (0.7 y). (2) The effect of stored reserves on estimated ages of fine roots is unlikely to be large in most natural abundance isotope studies. However, models should take stored reserves into account, particularly for pulse labeling studies and fast-cycling roots (< 1 y). (3) Radiocarbon values show a stronger correlation with position on the root branch system than they do with diameter or depth in the soil profile. (4) Live fine root dynamics are well described by a short-lived and a long-lived population, with mean turnover times <1 y and ~12 y, respectively. (5) Dead root decomposition is best modeled with (at least) two pools, with moderate (~2 y) and slow (~10 y) decomposition turnover times. (6) Root respiration has a large effect on fine root biomass and isotopic composition, and should be included in ecosystem C and isotope models. (7) It is important to distinguish structural from non-structural components in the long-lived root pool. Otherwise the 14C signature of root respiration is significantly different than atmospheric. We conclude that realistic quantification of C flows through fine roots requires a model with a level of complexity similar to Radix. Moreover, future root research efforts should seek to sample and sort roots by position on the root branch system rather than by diameter size class and improve estimates of root respiration within fine root populations.

The role of microbial communities in phosphorus cycling during litter decomposition in a tropical forest

NASA Astrophysics Data System (ADS)

Lloret Sevilla, E.; Brodie, E.; Bouskill, N.; Hao, Z.

2016-12-01

Phosphorus is an essential nutrient with a reduced availability in tropical forests. In these ecosystems, P is recycled highly efficiently through resorption and mineralization and P immobilization in the microbial biomass prevents its loss through occlusion in the soil mineral fraction. To improve models of ecosystem response to global change, further studies of the above and belowground plant and microbial traits related to P availability and uptake, are required. In tropical forests, high temperature and rainfall lead to some of the highest rates of litter decomposition on earth. Litter decomposition is a complex process mediated by a range of trophic groups: meso and microfauna initiate litter turnover through litter fragmentation facilitating colonization by fungi, and bacteria mediate the mineralization of organic matter and release of nutrients. To determine the important functional traits of these players in the efficient cycling of P in soils with low P availability, we are performing a leaf litter decomposition experiment in a humid tropical forest in Puerto Rico. Nylon litterbags with three mesh sizes (2mm, 20 μm and 0.45 μm) containing litter with different chemistry (tabonuco and palm) will be deployed on soil surface and sampled 6 times throughout 12 months. The use of different mesh sizes will allow us to identify the leading roles in litter turnover by physical allowance and/or exclusion of the decomposers. The 2 mm bags allow meso and microfauna, roots, fungi and bacteria. 20 μm bags will exclude fauna and roots and 0.45 μm only allow some bacteria. We hypothesize that fungi will dominate over bacteria in earlier stages of the decomposition with a higher production of extracellular hydrolytic enzymes. On the other hand, bacterial biomass is expected to increase with time. Qualitative changes in both fungal and bacterial communities along the decomposition process are also expected leading to changes in enzyme activity. We also postulate an enhanced microbial communities abundance and activity in litter with higher nutrient content. Regarding the microarthropods, we hypothesize that their diversity and abundance will be inversely related to mass loss.

Decoupling the direct and indirect effects of climate on plant litter decomposition: Accounting for stress-induced modifications in plant chemistry.

PubMed

Suseela, Vidya; Tharayil, Nishanth

2018-04-01

Decomposition of plant litter is a fundamental ecosystem process that can act as a feedback to climate change by simultaneously influencing both the productivity of ecosystems and the flux of carbon dioxide from the soil. The influence of climate on decomposition from a postsenescence perspective is relatively well known; in particular, climate is known to regulate the rate of litter decomposition via its direct influence on the reaction kinetics and microbial physiology on processes downstream of tissue senescence. Climate can alter plant metabolism during the formative stage of tissues and could shape the final chemical composition of plant litter that is available for decomposition, and thus indirectly influence decomposition; however, these indirect effects are relatively poorly understood. Climatic stress disrupts cellular homeostasis in plants and results in the reprogramming of primary and secondary metabolic pathways, which leads to changes in the quantity, composition, and organization of small molecules and recalcitrant heteropolymers, including lignins, tannins, suberins, and cuticle within the plant tissue matrix. Furthermore, by regulating metabolism during tissue senescence, climate influences the resorption of nutrients from senescing tissues. Thus, the final chemical composition of plant litter that forms the substrate of decomposition is a combined product of presenescence physiological processes through the production and resorption of metabolites. The changes in quantity, composition, and localization of the molecular construct of the litter could enhance or hinder tissue decomposition and soil nutrient cycling by altering the recalcitrance of the lignocellulose matrix, the composition of microbial communities, and the activity of microbial exo-enzymes via various complexation reactions. Also, the climate-induced changes in the molecular composition of litter could differentially influence litter decomposition and soil nutrient cycling. Compared with temperate ecosystems, the indirect effects of climate on litter decomposition in the tropics are not well understood, which underscores the need to conduct additional studies in tropical biomes. We also emphasize the need to focus on how climatic stress affects the root chemistry as roots contribute significantly to biogeochemical cycling, and on utilizing more robust analytical approaches to capture the molecular composition of tissue matrix that fuel microbial metabolism. © 2017 John Wiley & Sons Ltd.

Fine Root Productivity and Turnover of Ectomycorrhizal and Arbuscular Mycorrhizal Tree Species in a Temperate Broad-Leaved Mixed Forest

PubMed Central

Kubisch, Petra; Hertel, Dietrich; Leuschner, Christoph

2016-01-01

Advancing our understanding of tree fine root dynamics is of high importance for tree physiology and forest biogeochemistry. In temperate broad-leaved forests, ectomycorrhizal (EM) and arbuscular mycorrhizal (AM) tree species often are coexisting. It is not known whether EM and AM trees differ systematically in fine root dynamics and belowground resource foraging strategies. We measured fine root productivity (FRP) and fine root turnover (and its inverse, root longevity) of three EM and three AM broad-leaved tree species in a natural cool-temperate mixed forest using ingrowth cores and combined the productivity data with data on root biomass per root orders. FRP and root turnover were related to root morphological traits and aboveground productivity. FRP differed up to twofold among the six coexisting species with larger species differences in lower horizons than in the topsoil. Root turnover varied up to fivefold among the species with lowest values in Acer pseudoplatanus and highest in its congener Acer platanoides. Variation in root turnover was larger within the two groups than between EM and AM species. We conclude that the main determinant of FRP and turnover in this mixed forest is species identity, while the influence of mycorrhiza type seems to be less important. PMID:27617016

Adaptive root foraging strategies along a boreal-temperate forest gradient.

PubMed

Ostonen, Ivika; Truu, Marika; Helmisaari, Heljä-Sisko; Lukac, Martin; Borken, Werner; Vanguelova, Elena; Godbold, Douglas L; Lõhmus, Krista; Zang, Ulrich; Tedersoo, Leho; Preem, Jens-Konrad; Rosenvald, Katrin; Aosaar, Jürgen; Armolaitis, Kęstutis; Frey, Jane; Kabral, Naima; Kukumägi, Mai; Leppälammi-Kujansuu, Jaana; Lindroos, Antti-Jussi; Merilä, Päivi; Napa, Ülle; Nöjd, Pekka; Parts, Kaarin; Uri, Veiko; Varik, Mats; Truu, Jaak

2017-08-01

The tree root-mycorhizosphere plays a key role in resource uptake, but also in the adaptation of forests to changing environments. The adaptive foraging mechanisms of ectomycorrhizal (EcM) and fine roots of Picea abies, Pinus sylvestris and Betula pendula were evaluated along a gradient from temperate to subarctic boreal forest (38 sites between latitudes 48°N and 69°N) in Europe. Variables describing tree resource uptake structures and processes (absorptive fine root biomass and morphology, nitrogen (N) concentration in absorptive roots, extramatrical mycelium (EMM) biomass, community structure of root-associated EcM fungi, soil and rhizosphere bacteria) were used to analyse relationships between root system functional traits and climate, soil and stand characteristics. Absorptive fine root biomass per stand basal area increased significantly from temperate to boreal forests, coinciding with longer and thinner root tips with higher tissue density, smaller EMM biomass per root length and a shift in soil microbial community structure. The soil carbon (C) : N ratio was found to explain most of the variability in absorptive fine root and EMM biomass, root tissue density, N concentration and rhizosphere bacterial community structure. We suggest a concept of absorptive fine root foraging strategies involving both qualitative and quantitative changes in the root-mycorrhiza-bacteria continuum along climate and soil C : N gradients. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

RELATING FINE ROOT BIOMASS TO SOIL AND CLIMATE CONDITIONS IN THE PACIFIC NORTHWEST

EPA Science Inventory

The additive contribution of fine root biomass for Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco var. menziesii) and western hemlock (Tsuga heterophylla (Raf.) Sarg.) to the stand average fine root biomass were estimated for eight conifer stands in the Pacific Northwest. Base...

Effect of elevated atmospheric CO2 concentration on growth and leaf litter decomposition of Quercus acutissima and Fraxinus rhynchophylla

PubMed Central

Cha, Sangsub; Chae, Hee-Myung; Lee, Sang-Hoon; Shim, Jae-Kuk

2017-01-01

The atmospheric carbon dioxide (CO2) level is expected to increase substantially, which may change the global climate and carbon dynamics in ecosystems. We examined the effects of an elevated atmospheric CO2 level on the growth of Quercus acutissima and Fraxinus rhynchophylla seedlings. We investigated changes in the chemical composition of leaf litter, as well as litter decomposition. Q. acutissima and F. rhynchophylla did not show differences in dry weight between ambient CO2 and enriched CO2 treatments, but they exhibited different patterns of carbon allocation, namely, lower shoot/root ratio (S/R) and decreased specific leaf area (SLA) under CO2-enriched conditions. The elevated CO2 concentration significantly reduced the nitrogen concentration in leaf litter while increasing lignin concentrations and carbon/nitrogen (C/N) and lignin/N ratios. The microbial biomass associated with decomposing Q. acutissima leaf litter was suppressed in CO2 enrichment chambers, while that of F. rhynchophylla was not. The leaf litter of Q. acutissima from the CO2-enriched chambers, in contrast with F. rhynchophylla, contained much lower nutrient concentrations than that of the litter in the ambient air chambers. Consequently, poorer litter quality suppressed decomposition. PMID:28182638

Effect of elevated atmospheric CO2 concentration on growth and leaf litter decomposition of Quercus acutissima and Fraxinus rhynchophylla.

PubMed

Cha, Sangsub; Chae, Hee-Myung; Lee, Sang-Hoon; Shim, Jae-Kuk

2017-01-01

The atmospheric carbon dioxide (CO2) level is expected to increase substantially, which may change the global climate and carbon dynamics in ecosystems. We examined the effects of an elevated atmospheric CO2 level on the growth of Quercus acutissima and Fraxinus rhynchophylla seedlings. We investigated changes in the chemical composition of leaf litter, as well as litter decomposition. Q. acutissima and F. rhynchophylla did not show differences in dry weight between ambient CO2 and enriched CO2 treatments, but they exhibited different patterns of carbon allocation, namely, lower shoot/root ratio (S/R) and decreased specific leaf area (SLA) under CO2-enriched conditions. The elevated CO2 concentration significantly reduced the nitrogen concentration in leaf litter while increasing lignin concentrations and carbon/nitrogen (C/N) and lignin/N ratios. The microbial biomass associated with decomposing Q. acutissima leaf litter was suppressed in CO2 enrichment chambers, while that of F. rhynchophylla was not. The leaf litter of Q. acutissima from the CO2-enriched chambers, in contrast with F. rhynchophylla, contained much lower nutrient concentrations than that of the litter in the ambient air chambers. Consequently, poorer litter quality suppressed decomposition.

Fine Root Growth Phenology, Production, and Turnover in a Northern Hardwood Forest Ecosystem

Treesearch

Dudley J. Raynal

1994-01-01

A large part of the nutrient flux in deciduous forests is through fine root turnover, yet this process is seldom measured. As part of a nutrient cycling study, fine root dynamics were studied for two years at Huntington Forest in the Adirondack Mountain region of New York, USA. Root growth phenology was characterized using field rhizotrons, three methods were used to...

Aluminum and calcium in fine root tips of red spruce collected from the forest floor

Treesearch

K.T. Smith; W.C. Shortle; W.D. Ostrofsky

1995-01-01

Root chemistry is being increasingly used as a marker of biologically relevant soil chemistry. To evaluate this marker, we determined the precision of measurement, the effect of organic soil horizon, and the effect of stand elevation on the chemistry of fine root tips of red spruce (Picea rubens Sarg.) Fine root tips were collected from the F and H...

Effect of long-term drought on carbon allocation and nitrogen uptake of Pinus sylvestris seedlings

NASA Astrophysics Data System (ADS)

Pumpanen, Jukka; Aaltonen, Heidi; Lindén, Aki; Köster, Kajar; Biasi, Christina; Heinonsalo, Jussi

2015-04-01

Weather extremes such as drought events are expected to increase in the future as a result of climate change. The drought affects the allocation of carbon assimilated by plants e.g. by modifying the root to shoot ratio, amount of fine roots and the amount of mycorrhizal fungal hyphae. We studied the effect of long term drought on the allocation of carbon in a common garden experiment with 4-year-old Pinus sylvestris seedlings. Half of the seedlings were exposed to long-term drought by setting the soil water content close to wilting point for over two growing seasons whereas the other half was grown in soil close to field capacity. We conducted a pulse labelling with 13CO2 in the end of the study by injecting a known amount of 13C enriched CO2 to the seedlings and measuring the CO2 uptake and distribution of 13C to the biomass of the seedlings and to the root and rhizosphere respiration. In addition, we studied the effect of drought on the decomposition of needle litter and uptake of nitrogen by 15N labelled needles buried in the soil in litter bags. The litterbags were collected and harvested in the end of the experiment and the changes in microbial community in the litterbags were studied from the phospholipid fatty acid (PLFA) composition. We also determined the 15N isotope concentrations from the needles of the seedlings to study the effect of drought on the nitrogen uptake of the seedlings. Our results indicate that the drought had a significant effect both on the biomass allocation of the seedlings and on the microbial species composition. The amount of carbon allocated belowground was much higher in the seedlings exposed to drought compared to the control seedlings. The seedlings seemed to adapt their carbon allocation to long-term drought to sustain adequate needle biomass and water uptake. The seedlings also adapted their osmotic potential and photosynthesis capacity to sustain the long-term drought as was indicated by the measurements of osmotic potential and photosynthetic light response.

The effect of increased air humidity on fine root and rhizome biomass and turnover of silver birch forest ecosystem - a FAHM study.

NASA Astrophysics Data System (ADS)

Ostonen, I.; Kupper, P.; Sõber, J.; Aosaar, J.; Varik, M.; Lõhmus, K.

2012-04-01

A facility for free air humidity manipulation (FAHM) was established to investigate the effect of increased air humidity on belowground biomass and turnover in silver birch (Betula pendula Roth.) forest ecosystems with respect to rising air humidity predicted for Northern Europe. Fine root and rhizomes are short-lived and recognized as the most important component contributing to below-ground C fluxes in forests. The FAHM system enables air relative humidity to be increased on average 7 units (%) over the ambient level during mist fumigation. The experimental site contains humidified (H) and control (C) plots; each plot contains sectors with diverse "forest" understory and early successional grasses. The trees were planted in 2006, humidification started in spring 2008, and soil cores to study fine root and rhizome biomass and turnover were taken in 2007, 2009 and 2010. In July 2009, total fine root and rhizome biomass was 8 tons per ha in C and 16 tons per ha in H plots. The roots of understory formed 86% in C and 93% H plots, respectively. Our preliminary data suggest that the increased humidity affected more the roots of understory plants: fine root and rhizome biomass and production increased approximately twice by increasing air humidity. However, the tendency was similar for fine root biomass and production of silver birch. Fine root turnover speeded up for both silver birch and understory roots in H plots. Hence, changes in air humidity can significantly affect forest carbon cycling.

A SPATIAL ANALYSIS OF FINE-ROOT BIOMASS FROM STAND DATA IN OREGON AND WASHINGTON

EPA Science Inventory

Because of the high spatial variability of fine roots in natural forest stands, accurate estimates of stand-level fine root biomass are difficult and expensive to obtain by standard coring methods. This study compares two different approaches that employ aboveground tree metrics...

A SPATIAL ANALYSIS OF THE FINE ROOT BIOMASS FROM STAND DATA IN THE PACIFIC NORTHWEST

EPA Science Inventory

High spatial variability of fine roots in natural forest stands makes accurate estimates of stand-level fine root biomass difficult and expensive to obtain by standard coring methods. This study uses aboveground tree metrics and spatial relationships to improve core-based estima...

ELEVATED CO2 AND ELEVATED TEMPERATURE HAVE NO EFFECT ON DOUGLAS-FIR FINE-ROOT DYNAMICS IN NITROGEN-POOR SOIL

EPA Science Inventory

Here, we investigate fine-root production, mortality and standing crop of Douglas-fir (Pseudotsuga menziesii) seedlings exposed to elevated atmospheric CO2 and elevated air temperature. We hypothesized that these treatments would increase fine-root production, but that mortality ...

A global exploration of fine-root trait variation: opening the black box

USDA-ARS?s Scientific Manuscript database

A major part of ecosystem functioning relies on processes below ground, which are governed by fine root traits. This study synthesizes published and unpublished fine-root trait data available worldwide (>9000 observations from >1100 species on 14 traits) and examines their ecological value and globa...

Space sequestration below ground in old-growth spruce-beech forests-signs for facilitation?

PubMed

Bolte, Andreas; Kampf, Friederike; Hilbrig, Lutz

2013-01-01

Scientists are currently debating the effects of mixing tree species for the complementary resource acquisition in forest ecosystems. In four unmanaged old-growth spruce-beech forests in strict nature reserves in southern Sweden and northern Germany we assessed forest structure and fine rooting profiles and traits (≤2 mm) by fine root sampling and the analysis of fine root morphology and biomass. These studies were conducted in selected tree groups with four different interspecific competition perspectives: (1) spruce as a central tree, (2) spruce as competitor, (3) beech as a central tree, and (4) beech as competitor. Mean values of life fine root attributes like biomass (FRB), length (FRL), and root area index (RAI) were significantly lower for spruce than for beech in mixed stands. Vertical profiles of fine root attributes adjusted to one unit of basal area (BA) exhibited partial root system stratification when central beech is growing with spruce competitors. In this constellation, beech was able to raise its specific root length (SRL) and therefore soil exploration efficiency in the subsoil, while increasing root biomass partitioning into deeper soil layers. According to relative values of fine root attributes (rFRA), asymmetric below-ground competition was observed favoring beech over spruce, in particular when central beech trees are admixed with spruce competitors. We conclude that beech fine rooting is facilitated in the presence of spruce by lowering competitive pressure compared to intraspecific competition whereas the competitive pressure for spruce is increased by beech admixture. Our findings underline the need of spatially differentiated approaches to assess interspecific competition below ground. Single-tree approaches and simulations of below-ground competition are required to focus rather on microsites populated by tree specimens as the basic spatial study area.

Space sequestration below ground in old-growth spruce-beech forests—signs for facilitation?

PubMed Central

Bolte, Andreas; Kampf, Friederike; Hilbrig, Lutz

2013-01-01

Scientists are currently debating the effects of mixing tree species for the complementary resource acquisition in forest ecosystems. In four unmanaged old-growth spruce-beech forests in strict nature reserves in southern Sweden and northern Germany we assessed forest structure and fine rooting profiles and traits (≤2 mm) by fine root sampling and the analysis of fine root morphology and biomass. These studies were conducted in selected tree groups with four different interspecific competition perspectives: (1) spruce as a central tree, (2) spruce as competitor, (3) beech as a central tree, and (4) beech as competitor. Mean values of life fine root attributes like biomass (FRB), length (FRL), and root area index (RAI) were significantly lower for spruce than for beech in mixed stands. Vertical profiles of fine root attributes adjusted to one unit of basal area (BA) exhibited partial root system stratification when central beech is growing with spruce competitors. In this constellation, beech was able to raise its specific root length (SRL) and therefore soil exploration efficiency in the subsoil, while increasing root biomass partitioning into deeper soil layers. According to relative values of fine root attributes (rFRA), asymmetric below-ground competition was observed favoring beech over spruce, in particular when central beech trees are admixed with spruce competitors. We conclude that beech fine rooting is facilitated in the presence of spruce by lowering competitive pressure compared to intraspecific competition whereas the competitive pressure for spruce is increased by beech admixture. Our findings underline the need of spatially differentiated approaches to assess interspecific competition below ground. Single-tree approaches and simulations of below-ground competition are required to focus rather on microsites populated by tree specimens as the basic spatial study area. PMID:24009616

Are litter decomposition and fire linked through plant species traits?

PubMed

Cornelissen, Johannes H C; Grootemaat, Saskia; Verheijen, Lieneke M; Cornwell, William K; van Bodegom, Peter M; van der Wal, René; Aerts, Rien

2017-11-01

Contents 653 I. 654 II. 657 III. 659 IV. 661 V. 662 VI. 663 VII. 665 665 References 665 SUMMARY: Biological decomposition and wildfire are connected carbon release pathways for dead plant material: slower litter decomposition leads to fuel accumulation. Are decomposition and surface fires also connected through plant community composition, via the species' traits? Our central concept involves two axes of trait variation related to decomposition and fire. The 'plant economics spectrum' (PES) links biochemistry traits to the litter decomposability of different fine organs. The 'size and shape spectrum' (SSS) includes litter particle size and shape and their consequent effect on fuel bed structure, ventilation and flammability. Our literature synthesis revealed that PES-driven decomposability is largely decoupled from predominantly SSS-driven surface litter flammability across species; this finding needs empirical testing in various environmental settings. Under certain conditions, carbon release will be dominated by decomposition, while under other conditions litter fuel will accumulate and fire may dominate carbon release. Ecosystem-level feedbacks between decomposition and fire, for example via litter amounts, litter decomposition stage, community-level biotic interactions and altered environment, will influence the trait-driven effects on decomposition and fire. Yet, our conceptual framework, explicitly comparing the effects of two plant trait spectra on litter decomposition vs fire, provides a promising new research direction for better understanding and predicting Earth surface carbon dynamics. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Relationship between fine-root exudation and respiration of two Quercus species in a Japanese temperate forest.

PubMed

Sun, Lijuan; Ataka, Mioko; Kominami, Yuji; Yoshimura, Kenichi

2017-08-01

Plants allocate a considerable amount of carbon (C) to fine roots as respiration and exudation. Fine-root exudation could stimulate microbial activity, which further contributes to soil heterotrophic respiration. Although both root respiration and exudation are important components of belowground C cycling, how they relate to each other is less well known. In this study, we aimed to explore this relationship on mature trees growing in the field. The measurements were performed on two canopy species, Quercus serrata Thunb. and Quercus glauca, in a warm temperate forest. The respiration and exudation rates of the same fine-root segment were measured in parallel with a syringe-basis incubation and a closed static chamber, respectively. We also measured root traits and ectomycorrhizal colonization ratio because these indexes commonly relate to root respiration and reflect root physiology. The microbial activity enhanced by root exudation was investigated by comparing the dissolved organic carbon (DOC) and microbial biomass carbon (MBC) between rhizosphere soils and bulk soils. Mean DOC concentration and MBC were ca two times higher in the rhizosphere soils and positively related to exudation rates, indicating that exudation further relates to the C dynamics in the soils. Flux rates of exudation and respiration were positively correlated with each other. Both root exudation and respiration rates positively related to ectomycorrhizal colonization and root tissue nitrogen, and therefore the relationship between the two fluxes may be attributed to fine-root activity. The flux rates of root respiration were 8.7 and 10.5 times as much as those of exudation on a root-length basis and a root-weight basis, respectively. In spite of the fact that flux rates of respiration and exudation varied enormously among the fine-root segments of the two Quercus species, exudation was in proportion to respiration. This result gives new insight into the fine-root C-allocation strategy and the belowground C dynamics. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Fine root dynamics in moso bamboo and Japanese cedar forest by scanner method in central Taiwan

NASA Astrophysics Data System (ADS)

Chen, Zhi-Wei; Lin, Po-Hsuan; Kume, Tomonori

2017-04-01

Phyllostachys pubescens is one of the most important economic plant in the world. Phyllostachys pubescens originates from China and it had been introduced to neighbor countries about three hundred ago due to its economic value. But substantial bamboo forests were abandoned due to declines in demand. These unmanaged bamboo forests have been expanding to adjacent original forests in northern Taiwan. This vegetation alternation may not only decrease the local biodiversity but also affect the carbon cycle. Fine roots are responsible for water and nutrients acquisition and forming the most active part of the whole root system. The characteristics of fine roots are non-woody, small diameter and short lifespan. When roots keep producing new roots and replacing old roots, carbon and nutrients was transported into soil. Consequently, fine root production is one of the important component to understand the below-ground carbon cycle. However, there is few studies about fine root production in moso bamboo forests. We still lack effective method to obtain quantitative and objective data in Taiwan. It severely limits us to understand the below-ground carbon dynamics there. Minirhizotrons method has been used to investigate fine root dynamics by inserting transparent tubes into soil and by comparing changes in root length in images taken by micro-camera. But this method has some shortcomings; i.e. Most of image analysis are conducted manually and time-consuming. And it is difficult to estimate the stand level fine root production from small observation view. A new method "scanner method", which collect A4-size image (bigger than minirhizotrons) can overcome some parts of the shortcoming of minirhizotrons. The transparent acrylic box with A4-box view is inserted into soil and the interface between soil and box is scanned by commercial scanner. We can monitor the total projected root area, growth and decomposition separately by series of images. The primary objective of this study is to characterize the temporal and spatial variation of fine root dynamics in moso bamboo forests in central Taiwan by using scanner method with 6 acrylic boxes. Other the other hand, this study compared the result with those of adjacent Japanese cedar forests with 8 acrylic boxes. Consequently, we found the fine root production rate and decomposition rate of the bamboo forest are higher than cedar forest. Also, the timing of first observation of new roots was earlier in bamboo forest than cedar forest. This study also examined differences of temporal patterns among measurement locations based on long-term data after box installation.

Litter of the hemiparasite Bartsia alpina enhances plant growth: evidence for a functional role in nutrient cycling.

PubMed

Quested, Helen M; Press, Malcolm C; Callaghan, Terry V

2003-05-01

Hemiparasitic angiosperms concentrate nutrients in their leaves and also produce high quality litter, which can decompose faster and release more nutrients than that of surrounding species. The impact of these litters on plant growth may be particularly important in nutrient-poor communities where hemiparisites can be abundant, such as the sub-Arctic. We tested the hypothesis that plant growth is enhanced by the litter of the hemiparasite Bartsia alpina, in comparison with litter of co-occurring dwarf shrub species, using a pot based bioassay approach. Growth of Betula nana and Poa alpina was up to 51% and 41% greater, respectively, in the presence of Bartsia alpina litter than when grown with dwarf shrub litter (Vaccinium uliginosum, Betula nana and Empetrum nigrum subsp. hermaphroditum). The nutrient concentrations of Betula nana plants grown with Bartsia alpina litter were almost double those of plants grown with dwarf shrub litter, and a significantly greater proportion of biomass was allocated to shoots rather than roots, strongly suggesting that nutrient availability was higher where Bartsia alpina litter was present. The presence of litter from dwarf shrubs, or the moss Hylocomium splendens, did not reduce the positive effect of Bartsia alpina litter on plant growth. E. nigrum litter did not appear to affect plant growth substantially differently from litter of other dwarf shrub species, despite earlier reports of its allelopathic action. The enhanced nutrient uptake and growth of plants in the presence of Bartsia alpina (and potentially other hemiparasitic species) litter could have important implications for communities in which it occurs, including enhanced survival of seedlings of co-occurring species and increased resource patchiness.

Nutrient limitation in three lowland tropical forests in southern China receiving high nitrogen deposition: insights from fine root responses to nutrient additions.

PubMed

Zhu, Feifei; Yoh, Muneoki; Gilliam, Frank S; Lu, Xiankai; Mo, Jiangming

2013-01-01

Elevated nitrogen (N) deposition to tropical forests may accelerate ecosystem phosphorus (P) limitation. This study examined responses of fine root biomass, nutrient concentrations, and acid phosphatase activity (APA) of bulk soil to five years of N and P additions in one old-growth and two younger lowland tropical forests in southern China. The old-growth forest had higher N capital than the two younger forests from long-term N accumulation. From February 2007 to July 2012, four experimental treatments were established at the following levels: Control, N-addition (150 kg N ha(-1) yr(-1)), P-addition (150 kg P ha(-1) yr(-1)) and N+P-addition (150 kg N ha(-1) yr(-1) plus 150 kg P ha(-1) yr(-1)). We hypothesized that fine root growth in the N-rich old-growth forest would be limited by P availability, and in the two younger forests would primarily respond to N additions due to large plant N demand. Results showed that five years of N addition significantly decreased live fine root biomass only in the old-growth forest (by 31%), but significantly elevated dead fine root biomass in all the three forests (by 64% to 101%), causing decreased live fine root proportion in the old-growth and the pine forests. P addition significantly increased live fine root biomass in all three forests (by 20% to 76%). The combined N and P treatment significantly increased live fine root biomass in the two younger forests but not in the old-growth forest. These results suggest that fine root growth in all three study forests appeared to be P-limited. This was further confirmed by current status of fine root N:P ratios, APA in bulk soil, and their responses to N and P treatments. Moreover, N addition significantly increased APA only in the old-growth forest, consistent with the conclusion that the old-growth forest was more P-limited than the younger forests.

Rooting strategies in a subtropical savanna: a landscape-scale three-dimensional assessment.

PubMed

Zhou, Yong; Boutton, Thomas W; Wu, X Ben; Wright, Cynthia L; Dion, Anais L

2018-04-01

In resource-limited savannas, the distribution and abundance of fine roots play an important role in acquiring essential resources and structuring vegetation patterns and dynamics. However, little is known regarding the three-dimensional distribution of fine roots in savanna ecosystems at the landscape scale. We quantified spatial patterns of fine root density to a depth of 1.2 m in a subtropical savanna landscape using spatially specific sampling. Kriged maps revealed that fine root density was highest at the centers of woody patches, decreased towards the canopy edges, and reached lowest values within the grassland matrix throughout the entire soil profile. Lacunarity analyses indicated that spatial heterogeneities of fine root density decreased continuously to a depth of 50 cm and then increased in deeper portions of the soil profile across this landscape. This vertical pattern might be related to inherent differences in root distribution between trees/shrubs and herbaceous species, and the presence/absence of an argillic horizon across this landscape. The greater density of fine roots beneath woody patches in both upper and lower portions of the soil profile suggests an ability to acquire disproportionately more resources than herbaceous species, which may facilitate the development and persistence of woody patches across this landscape.

ForCent model development and testing using the Enriched Background Isotope Study experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parton, W.J.; Hanson, P. J.; Swanston, C.

The ForCent forest ecosystem model was developed by making major revisions to the DayCent model including: (1) adding a humus organic pool, (2) incorporating a detailed root growth model, and (3) including plant phenological growth patterns. Observed plant production and soil respiration data from 1993 to 2000 were used to demonstrate that the ForCent model could accurately simulate ecosystem carbon dynamics for the Oak Ridge National Laboratory deciduous forest. A comparison of ForCent versus observed soil pool {sup 14}C signature ({Delta} {sup 14}C) data from the Enriched Background Isotope Study {sup 14}C experiment (1999-2006) shows that the model correctly simulatesmore » the temporal dynamics of the {sup 14}C label as it moved from the surface litter and roots into the mineral soil organic matter pools. ForCent model validation was performed by comparing the observed Enriched Background Isotope Study experimental data with simulated live and dead root biomass {Delta} {sup 14}C data, and with soil respiration {Delta} {sup 14}C (mineral soil, humus layer, leaf litter layer, and total soil respiration) data. Results show that the model correctly simulates the impact of the Enriched Background Isotope Study {sup 14}C experimental treatments on soil respiration {Delta} {sup 14}C values for the different soil organic matter pools. Model results suggest that a two-pool root growth model correctly represents root carbon dynamics and inputs to the soil. The model fitting process and sensitivity analysis exposed uncertainty in our estimates of the fraction of mineral soil in the slow and passive pools, dissolved organic carbon flux out of the litter layer into the mineral soil, and mixing of the humus layer into the mineral soil layer.« less

ForCent Model Development and Testing using the Enriched Background Isotope Study (EBIS) Experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parton, William; Hanson, Paul J; Swanston, Chris

The ForCent forest ecosystem model was developed by making major revisions to the DayCent model including: (1) adding a humus organic pool, (2) incorporating a detailed root growth model, and (3) including plant phenological growth patterns. Observed plant production and soil respiration data from 1993 to 2000 were used to demonstrate that the ForCent model could accurately simulate ecosystem carbon dynamics for the Oak Ridge National Laboratory deciduous forest. A comparison of ForCent versus observed soil pool 14C signature (? 14C) data from the Enriched Background Isotope Study 14C experiment (1999-2006) shows that the model correctly simulates the temporal dynamicsmore » of the 14C label as it moved from the surface litter and roots into the mineral soil organic matter pools. ForCent model validation was performed by comparing the observed Enriched Background Isotope Study experimental data with simulated live and dead root biomass ? 14C data, and with soil respiration ? 14C (mineral soil, humus layer, leaf litter layer, and total soil respiration) data. Results show that the model correctly simulates the impact of the Enriched Background Isotope Study 14C experimental treatments on soil respiration ? 14C values for the different soil organic matter pools. Model results suggest that a two-pool root growth model correctly represents root carbon dynamics and inputs to the soil. The model fitting process and sensitivity analysis exposed uncertainty in our estimates of the fraction of mineral soil in the slow and passive pools, dissolved organic carbon flux out of the litter layer into the mineral soil, and mixing of the humus layer into the mineral soil layer.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Filley, T. R.; Boutton, T. W.; Liao, J. D.

Encroachment of thorn woodlands into grasslands of southern Texas has resulted in greater aboveground and belowground biomass and greater soil organic carbon (SOC) stocks. Our previous studies showed that a large percentage of the SOC accrued under invading woody clusters was not stabilized within protective soil aggregates or on mineral-surfaces. Here we evaluated lignin and cutin- and suberin-derived substituted fatty acid (SFA) chemistry to determine if the accrual of nonaggregated particulate organic matter (POM) in woodlands was promoted by inherently greater recalcitrance of tissues from woody versus grass species, and if there was selective input of aboveground versus belowground plantmore » carbon to POM. Woody clusters exhibited reduced concentrations of cutin-derived SFA and cinnamyl phenols within surface litter compared to fresh aboveground plant material. However, root litter exhibited relatively minor changes in biopolymer chemistry compared to fresh root tissue, suggesting it was either more stable or was refreshed at a greater rate. Between 14 and 105 years of woody plant encroachment, SFA in free POM fractions appeared to be consistently derived from root material while SFA within intraaggregate POM were increasingly derived from cutin sources. In addition, the shift from herbaceous to woody input was accompanied by enrichment in the amount of cutin and suberin-derived aliphatics with respect to lignin in both root and surface litter as well as nonaggregated POM. Woody plant encroachment at this site results in the rapid accrual of POM pools that are biochemically recalcitrant, providing a mechanism by which soil organic carbon can accumulate in this sandy soil system. Our results also lend further credence to the hypothesis that aliphatic biopolymers, particularly root-derived suberin, are important components of long-term soil organic carbon stabilization.« less

Chemical changes to nonaggregated particulate soil organic matter following grassland-to-woodland transition in a subtropical savanna

NASA Astrophysics Data System (ADS)

Filley, Timothy R.; Boutton, Thomas W.; Liao, Julia D.; Jastrow, Julie D.; Gamblin, David E.

2008-09-01

Encroachment of thorn woodlands into grasslands of southern Texas has resulted in greater aboveground and belowground biomass and greater soil organic carbon (SOC) stocks. Our previous studies showed that a large percentage of the SOC accrued under invading woody clusters was not stabilized within protective soil aggregates or on mineral-surfaces. Here we evaluated lignin and cutin- and suberin-derived substituted fatty acid (SFA) chemistry to determine if the accrual of nonaggregated particulate organic matter (POM) in woodlands was promoted by inherently greater recalcitrance of tissues from woody versus grass species, and if there was selective input of aboveground versus belowground plant carbon to POM. Woody clusters exhibited reduced concentrations of cutin-derived SFA and cinnamyl phenols within surface litter compared to fresh aboveground plant material. However, root litter exhibited relatively minor changes in biopolymer chemistry compared to fresh root tissue, suggesting it was either more stable or was refreshed at a greater rate. Between 14 and 105 years of woody plant encroachment, SFA in free POM fractions appeared to be consistently derived from root material while SFA within intraaggregate POM were increasingly derived from cutin sources. In addition, the shift from herbaceous to woody input was accompanied by enrichment in the amount of cutin and suberin-derived aliphatics with respect to lignin in both root and surface litter as well as nonaggregated POM. Woody plant encroachment at this site results in the rapid accrual of POM pools that are biochemically recalcitrant, providing a mechanism by which soil organic carbon can accumulate in this sandy soil system. Our results also lend further credence to the hypothesis that aliphatic biopolymers, particularly root-derived suberin, are important components of long-term soil organic carbon stabilization.

Dynamics of soil exploration by fine roots down to a depth of 10 m throughout the entire rotation in Eucalyptus grandis plantations

PubMed Central

Laclau, Jean-Paul; da Silva, Eder A.; Rodrigues Lambais, George; Bernoux, Martial; le Maire, Guerric; Stape, José L.; Bouillet, Jean-Pierre; Gonçalves, José L. de Moraes; Jourdan, Christophe; Nouvellon, Yann

2013-01-01

Although highly weathered soils cover considerable areas in tropical regions, little is known about exploration by roots in deep soil layers. Intensively managed Eucalyptus plantations are simple forest ecosystems that can provide an insight into the belowground growth strategy of fast-growing tropical trees. Fast exploration of deep soil layers by eucalypt fine roots may contribute to achieving a gross primary production that is among the highest in the world for forests. Soil exploration by fine roots down to a depth of 10 m was studied throughout the complete cycle in Eucalyptus grandis plantations managed in short rotation. Intersects of fine roots, less than 1 mm in diameter, and medium-sized roots, 1–3 mm in diameter, were counted on trench walls in a chronosequence of 1-, 2-, 3.5-, and 6-year-old plantations on a sandy soil, as well as in an adjacent 6-year-old stand growing in a clayey soil. Two soil profiles were studied down to a depth of 10 m in each stand (down to 6 m at ages 1 and 2 years) and 4 soil profiles down to 1.5–3.0 m deep. The root intersects were counted on 224 m2 of trench walls in 15 pits. Monitoring the soil water content showed that, after clear-cutting, almost all the available water stored down to a depth of 7 m was taken up by tree roots within 1.1 year of planting. The soil space was explored intensively by fine roots down to a depth of 3 m from 1 year after planting, with an increase in anisotropy in the upper layers throughout the rotation. About 60% of fine root intersects were found at a depth of more than 1 m, irrespective of stand age. The root distribution was isotropic in deep soil layers and kriged maps showed fine root clumping. A considerable volume of soil was explored by fine roots in eucalypt plantations on deep tropical soils, which might prevent water and nutrient losses by deep drainage after canopy closure and contribute to maximizing resource uses. PMID:23847645

[Effects of tree species fine root decomposition on soil active organic carbon].

PubMed

Liu, Yan; Wang, Si-Long; Wang, Xiao-Wei; Yu, Xiao-Jun; Yang, Yue-Jun

2007-03-01

With incubation test, this paper studied the effects of fine root decomposition of Alnus cremastogyne, Cunninghamia lanceolata and Michelia macclurei on the content of soil active organic carbon at 9 degrees C , 14 degrees C , 24 degrees C and 28 degrees C. The results showed that the decomposition rate of fine root differed significantly with test tree species, which was decreased in the order of M. macclurei > A. cremastogyne > C. lanceolata. The decomposition rate was increased with increasing temperature, but declined with prolonged incubation time. Fine root source, incubation temperature, and incubation time all affected the contents of soil microbial biomass carbon and water-soluble organic carbon. The decomposition of fine root increased soil microbial biomass carbon and water-soluble organic carbon significantly, and the effect decreased in the order of M. macclurei > A. cremastogyne > C. lanceolata. Higher contents of soil microbial biomass carbon and water-soluble organic carbon were observed at medium temperature and middle incubation stage. Fine root decomposition had less effect on the content of soil readily oxidized organic carbon.

Polyphenols in the woody roots of Norway spruce and European beech reduce TTC.

PubMed

Richter, Anika K; Frossard, Emmanuel; Brunner, Ivano

2007-01-01

A common method to determine the vitality of fine root tissue is the measurement of respiratory activity with triphenyltetrazolium chloride (TTC). The colorless TTC is reduced to the red-colored triphenyl formazan (TF) as a result of the dehydrogenase activity of the mitochondrial respiratory chain. However, measurements with woody fine roots of adult Norway spruce and European beech trees showed that dead control roots had a high potential to react with TTC. High reactivity was found in boiled fine roots and the bark of coarse roots, but not in the boiled wood of coarse roots. By sequential extraction of dried and ground adult Norway spruce fine roots, reactivity with TTC was reduced by about 75% (water extraction), 93% (water/methanol extraction) and 94% (water/acetone extraction). The water extract reacted with TTC in the same way as polyphenols such as lignin, catechin and epicatechin. Boiling did not affect the extent to which fine roots of adult trees reduced TTC, whereas it greatly reduced TTC reduction by seedling roots. Application of the TTC test to roots of spruce seedlings subjected to increasing drought showed a progressive decrease in TTC reduction. The decrease in TTC reduction was paralleled by a reduction in O(2) consumption, thus supporting the conclusion that for roots with a low polyphenol content the TTC test provides a valid assessment of tissue vitality. Our results suggest, however, that the TTC test should not be applied to the fine roots of adult trees because of their high content of polyphenolic compounds whose reaction with TTC masks changes in TTC reduction due to changes in the respiratory capacity of the tissue.

Roots Stimulate Expression of Decomposition Transcripts in the Soil Microbiome

NASA Astrophysics Data System (ADS)

Nuccio, E. E.; Karaoz, U.; Zhou, J.; Brodie, E.; Firestone, M.; Pett-Ridge, J.

2016-12-01

The soil surrounding plant roots, the rhizosphere, has long been recognized as a zone of great functional importance in terrestrial ecosystems. Rhizosphere microorganisms can affect the breakdown of plant tissues and root litter, and can accelerate the decomposition of detrital plant biomass, which is a process commonly described as "priming." However, the molecular mechanisms underlying rhizosphere C cycling are poorly understood, and the carbohydrate and lignolytic gene transcripts mediating the decomposition of root litter in soil are largely unidentified. We hypothesized that root exudates stimulate the expression of enzymes that are involved in decomposition of macromolecular C compounds. To assess how the abundance and diversity of decomposition enzymes differs in the rhizosphere relative to the surrounding bulk soil, we sequenced the community gene expression (metatranscriptomes) and single cell genomes of rhizosphere and bulk soil associated with wild oat (Avena fatua) over time (3, 6, 12, and 22 days). To isolate roots of a defined age in a mature plant, we used microcosms with a transparent experimental sidecar to track roots as they grew. Our results showed that a large number of C decomposition enzymes were more highly expressed in the rhizosphere compared to bulk soil, and that overall, transcripts tended to be elevated in younger roots than older roots. Genes relevant to aromatic C breakdown (nitroreductase, 4-hydroxybenzoate degradation, pectin methylesterase) and organic N cycling (ammonification) were elevated in the rhizosphere. This work identifies the potential molecular mechanisms that underpin priming in rhizosphere soil.

Tree species diversity interacts with elevated CO2 to induce a greater root system response.

PubMed

Smith, Andrew R; Lukac, Martin; Bambrick, Michael; Miglietta, Franco; Godbold, Douglas L

2013-01-01

As a consequence of land-use change and the burning of fossil fuels, atmospheric concentrations of CO2 are increasing and altering the dynamics of the carbon cycle in forest ecosystems. In a number of studies using single tree species, fine root biomass has been shown to be strongly increased by elevated CO2 . However, natural forests are often intimate mixtures of a number of co-occurring species. To investigate the interaction between tree mixture and elevated CO2 , Alnus glutinosa, Betula pendula and Fagus sylvatica were planted in areas of single species and a three species polyculture in a free-air CO2 enrichment study (BangorFACE). The trees were exposed to ambient or elevated CO2 (580 μmol mol(-1) ) for 4 years. Fine and coarse root biomass, together with fine root turnover and fine root morphological characteristics were measured. Fine root biomass and morphology responded differentially to the elevated CO2 at different soil depths in the three species when grown in monocultures. In polyculture, a greater response to elevated CO2 was observed in coarse roots to a depth of 20 cm, and fine root area index to a depth of 30 cm. Total fine root biomass was positively affected by elevated CO2 at the end of the experiment, but not by species diversity. Our data suggest that existing biogeochemical cycling models parameterized with data from species grown in monoculture may be underestimating the belowground response to global change. © 2012 Blackwell Publishing Ltd.

Comparative effects of simulated acid rain of different ratios of SO42- to NO3- on fine root in subtropical plantation of China.

PubMed

Liu, Xin; Zhao, Wenrui; Meng, Miaojing; Fu, Zhiyuan; Xu, Linhao; Zha, Yan; Yue, Jianmin; Zhang, Shuifeng; Zhang, Jinchi

2018-03-15

The influence of acid rain on forest trees includes direct effects on foliage as well as indirect soil-mediated effects that cause a reduction in fine-root growth. In addition, the concentration of NO 3 - in acid rain increases with the rapidly growing of nitrogen deposition. In this study, we investigated the impact of simulated acid rain with different SO 4 2- /NO 3 - (S/N) ratios, which were 5:1 (S), 1:1 (SN) and 1:5 (N), on fine-root growth from March 2015 to February 2016. Results showed that fine roots were more sensitive to the effects of acid rain than soils in the short-term. Both soil pH and fine root biomass (FRB) significantly decreased as acid rain pH decreased, and also decreased with the percentage of NO 3 - increased in acid rain. Acid rain pH significantly influenced soil total carbon and available potassium in summer. Higher acidity level (pH=2.5), especially of the N treatments, had the strongest inhibitory impact on soil microbial activity after summer. The structural equation modelling results showed that acid rain S/N ratio and pH had stronger direct effects on FRB than indirect effects via changed soil and fine root properties. Fine-root element contents and antioxidant enzymes activities were significantly affected by acid rain S/N ratio and pH during most seasons. Fine-root Al ion content, Ca/Al, Mg/Al ratios and catalase activity were used as better indicators than soil parameters for evaluating the effects of different acid rain S/N ratios and pH on forests. Our results suggest that the ratio of SO 4 2- to NO 3 - in acid rain is an important factor which could affect fine-root growth in subtropical forests of China. Copyright © 2017. Published by Elsevier B.V.

Root biomass, turnover and net primary productivity of a coffee agroforestry system in Costa Rica: effects of soil depth, shade trees, distance to row and coffee age

PubMed Central

Defrenet, Elsa; Roupsard, Olivier; Van den Meersche, Karel; Charbonnier, Fabien; Pastor Pérez-Molina, Junior; Khac, Emmanuelle; Prieto, Iván; Stokes, Alexia; Roumet, Catherine; Rapidel, Bruno; de Melo Virginio Filho, Elias; Vargas, Victor J.; Robelo, Diego; Barquero, Alejandra; Jourdan, Christophe

2016-01-01

Background and Aims In Costa Rica, coffee (Coffea arabica) plants are often grown in agroforests. However, it is not known if shade-inducing trees reduce coffee plant biomass through root competition, and hence alter overall net primary productivity (NPP). We estimated biomass and NPP at the stand level, taking into account deep roots and the position of plants with regard to trees. Methods Stem growth and root biomass, turnover and decomposition were measured in mixed coffee/tree (Erythrina poeppigiana) plantations. Growth ring width and number at the stem base were estimated along with stem basal area on a range of plant sizes. Root biomass and fine root density were measured in trenches to a depth of 4 m. To take into account the below-ground heterogeneity of the agroforestry system, fine root turnover was measured by sequential soil coring (to a depth of 30 cm) over 1 year and at different locations (in full sun or under trees and in rows/inter-rows). Allometric relationships were used to calculate NPP of perennial components, which was then scaled up to the stand level. Key Results Annual ring width at the stem base increased up to 2·5 mm yr−1 with plant age (over a 44-year period). Nearly all (92 %) coffee root biomass was located in the top 1·5 m, and only 8 % from 1·5 m to a depth of 4 m. Perennial woody root biomass was 16 t ha−1 and NPP of perennial roots was 1·3 t ha−1 yr−1. Fine root biomass (0–30 cm) was two-fold higher in the row compared with between rows. Fine root biomass was 2·29 t ha−1 (12 % of total root biomass) and NPP of fine roots was 2·96 t ha−1 yr−1 (69 % of total root NPP). Fine root turnover was 1·3 yr−1 and lifespan was 0·8 years. Conclusions Coffee root systems comprised 49 % of the total plant biomass; such a high ratio is possibly a consequence of shoot pruning. There was no significant effect of trees on coffee fine root biomass, suggesting that coffee root systems are very competitive in the topsoil. PMID:27551026

Do Variations in Detrital Inputs Influence Stable Soil Organic Matter? - An Experimental Approach

NASA Astrophysics Data System (ADS)

Lajtha, K.; Townsend, K.; Brewer, E.; Caldwell, B.; Kalbitz, K.; Plante, A.

2007-12-01

Recognition of the importance of feedbacks from plants in determining soil nutrient dynamics and C storage led to a large number of litter decomposition studies. Despite growing knowledge of short-term litter dynamics, we know relatively little about the fate of plant litter and its role in determining SOM content and nutrient cycling over time scales ranging from decades and centuries. To address this gap, we established long-term studies of controls on soil organic matter formation in an old-growth forest at the H.J. Andrews Experimental Forest, OR. This study complements a network of recently established similar experiments that pan climatic and soil gradients, as well as the original DIRT experiment established in the Wisconsin Arboretum in 1956 in both grassland and forested sites. The central goal of the DIRT project is to assess how rates and sources of plant litter inputs control the accumulation and dynamics of organic matter and nutrients in forest soils over decadal time scales. Treatment plots include doubled litter (needle) inputs , doubled wood, no above ground litter (screened) inputs, no root inputs (trenched), and no inputs (screened and trenched). For the 50th anniversary of the Wisconsin sites and the 10th anniversary of the H.J. Andrews site, we used sequential density fractionation of soils from all treatments to determine if adding or removing either below- or above-ground litter inputs influenced carbon stabilization as soil organic matter. After 50 years, double litter plots in both prairie and forested soils had higher %C in the 0-10 cm horizon. In the forested site, plots showed increased C content of the lightest fraction, which represents relatively young SOM with a short turnover time. However, the first two heavy fractions also showed increases in C with added aboveground litter, suggesting the importance of aboveground litter inputs to SOM in the forest. No such pattern existed for the prairie soil, and we hypothesize that this is because aboveground, labile litter adds very little to stabilized SOM in grasslands, and that root-derived C is the dominant control on SOM stabilization in grasslands. These results were confirmed with analysis of labile C (short -term respiration measurements) and acid hydrolysis resistant C across treatments. The relative contribution of aboveground vs. belowground litter was analyzed through the analysis of cutin and suberin acids, and we found that the detrital source of litter was retained in soils and could be fingerprinted through this analysis. Thermal analysis, including thermogravimetry (TG) and differential scanning calorimetry (DSC) performed simultaneously is currently being applied to explore both SOM quality and stability.

Chemistry and Long-Term Decomposition of Roots of Douglas-Fir Grown under Elevated Atmospheric Carbon Dioxide and Warming Conditions

EPA Science Inventory

Elevated atmospheric CO2 concentrations and warming may affect the quality of litters of forest plants and their subsequent decomposition in ecosystems, thereby potentially affecting the global carbon cycle. However, few data on root tissues are available to test this feedback to...

Winter climate change and fine root biogenic silica in sugar maple trees (Acer saccharum): Implications for silica in the Anthropocene

NASA Astrophysics Data System (ADS)

Maguire, Timothy J.; Templer, Pamela H.; Battles, John J.; Fulweiler, Robinson W.

2017-03-01

Winter temperatures are projected to increase over the next century, leading to reductions in winter snowpack and increased frequency of soil freezing in many northern forest ecosystems. Here we examine biogenic silica (BSi) concentrations in sugar maple (Acer saccharum) fine roots collected from a snow manipulation experiment at Hubbard Brook Experimental Forest (New Hampshire, USA). Increased soil freezing significantly lowered the BSi content of sugar maple fine roots potentially decreasing their capacity to take up water and dissolved nutrients. The reduced silica uptake (8 ± 1 kmol silica km-2) by sugar maple fine roots is comparable to silica export from temperate forest watersheds. We estimate that fine roots account for 29% of sugar maple BSi, despite accounting for only 4% of their biomass. These results suggest that increased frequency of soil freezing will reduce silica uptake by temperate tree roots, thereby changing silica availability in downstream receiving waters.

Fine root dynamics across a chronosequence of upland temperate deciduous forests

Treesearch

Travis W. Idol; Phillip E. Pope; Felix Jr. Ponder

2000-01-01

Following a major disturbance event in forests that removes most of the standing vegetation, patterns of fine root growth, mortality, and decomposition may be altered from the pre-disturbance conditions. The objective of this study was to describe the changes in the seasonal and spatial dynamics of fine root growth, mortality, and decomposition that occur following...

ASSESSING THE EFFECTS OF ELEVATED ATMOSP;HERIC CO2 AND TEMPERATURE ON FINE ROOT PRODUCTION AND MORTALITY IN FORESTED SYSTEMS

EPA Science Inventory

Little is known about the effects of global climate change on the production and mortality of fine roots. To better understand these processes we have conducted a number of studies to investigate the factors that influence the production and mortality of fine roots in coniferous...

EFFECTS OF CO2 AND TEMPERATURE ON FINE ROOT PRODUCTION AND MORTALITY IN DOUGLAS FIR

EPA Science Inventory

Little is known about the effects of global climate change on the production and mortality of fine roots. We conducted a 4-year study to determine the effects of elevated CO2 and temperature on Douglas fir fine ( 2 mm in diameter) roots. The study was conducted in sun-lit cont...

Belowground Nutrient Dynamics Following Three Harvest Intensities on the Pearl River Floodplain, Mississippi

Treesearch

E.B. Schilling; B.G. Lockaby; Robert Rummer

1999-01-01

Abstract: The influence of clear and partial cut harvests on belowground nutrient cycling processes was examined on the Pearl River floodplain, Mississippi. Foci examined by this study included fine root biomass and detritus, fine root production, fine root nutrient contents, soil respiration rates, and microbial biomass C, N, and P during the first...

Below-ground effects of enhanced tropospheric ozone and drought in a beech/spruce forest (Fagus sylvatica L. / Picea abies [L.] Karst)

EPA Science Inventory

The effects of experimentally elevated O3 on soil respiration rates, standing fine-root biomass, fine-root production and δ13C signature of newly produced fine roots were investigated in an adult European beech/Norway spruce forest in Germany during two subsequent years with cont...

Fine-root growth in a forested bog is seasonally dynamic, but shallowly distributed in nutrient-poor peat

Treesearch

Colleen M. Iversen; Joanne Childs; Richard J. Norby; Todd A. Ontl; Randall K. Kolka; Deanne J. Brice; Karis J. McFarlane; Paul J. Hanson

2017-01-01

Background and aims. Fine roots contribute to ecosystem carbon, water, and nutrient fluxes through resource acquisition, respiration, exudation, and turnover, but are understudied in peatlands. We aimed to determine how the amount and timing of fine-root growth in a forested, ombrotrophic bog varied across gradients of vegetation density, peat...

Organic matter and nutrients associated with fine root turnover in a white oak stand. [Quercus albus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Joslin, J.D.; Henderson, G.S.

1987-06-01

Organic matter and nutrients cycled by fine root turnover were quantified in a mature white oak (Quercus alba L.) stand and compared to contributions from litterfall. The budget method, a revised version of the traditional repeated sampling method, was used to measure root turnover. The magnitude of the live and dead pools of three size classes of fine (<5 mm diameter) roots were monitored bimonthly for 14 months. Decomposition rates over these intervals were also measured, while production and mortality were calculated. Litterfall was collected simultaneously, and the nutrient concentrations of the various detritus components determined. Root pools fluctuated less,more » and total root turnover biomass (220 g m/sup -2/ yr/sup -1/) was also less than previously noted in most other stands studied. Fine root turnover accounted for 30% of the total detritus production and 20-40% of the turnover of the five macronutrients (N, P, K, Ca, Mg) studied. Differences with previous studies suggest that there may be rather large species and/or site-related differences in the amount of energy various stands allocate for fine root maintenance. For. Sci. 33(2):330-346.« less

Fine root responses to temporal nutrient heterogeneity and competition in seedlings of two tree species with different rooting strategies.

PubMed

Wang, Peng; Shu, Meng; Mou, Pu; Weiner, Jacob

2018-03-01

There is little direct evidence for effects of soil heterogeneity and root plasticity on the competitive interactions among plants. In this study, we experimentally examined the impacts of temporal nutrient heterogeneity on root growth and interactions between two plant species with very different rooting strategies: Liquidambar styraciflua (sweet gum), which shows high root plasticity in response to soil nutrient heterogeneity, and Pinus taeda (loblolly pine), a species with less plastic roots. Seedlings of the two species were grown in sandboxes in inter- and intraspecific combinations. Nutrients were applied in a patch either in a stable (slow-release) or in a variable (pulse) manner. Plant aboveground biomass, fine root mass, root allocation between nutrient patch and outside the patch, and root vertical distribution were measured. L. styraciflua grew more aboveground (40% and 27% in stable and variable nutrient treatment, respectively) and fine roots (41% and 8% in stable and variable nutrient treatment, respectively) when competing with P. taeda than when competing with a conspecific individual, but the growth of P. taeda was not changed by competition from L. styraciflua . Temporal variation in patch nutrient level had little effect on the species' competitive interactions. The more flexible L. styraciflua changed its vertical distribution of fine roots in response to competition from P. taeda , growing more roots in deeper soil layers compared to its roots in conspecific competition, leading to niche differentiation between the species, while the fine root distribution of P. taeda remained unchanged across all treatments. Synthesis . L. styraciflua showed greater flexibility in root growth by changing its root vertical distribution and occupying space of not occupied by P. taeda . This flexibility gave L. styraciflua an advantage in interspecific competition.

Allelopathic Effects of Litter Axonopus compressus against Two Weedy Species and Its Persistence in Soil

PubMed Central

Samedani, B.; Juraimi, A. S.; Rafii, M. Y.; Anuar, A. R.; Sheikh Awadz, S. A.; Anwar, M. P.

2013-01-01

This study investigated the allelopathic effect of Axonopus compressus litter on Asystasia gangetica and Pennisetum polystachion. In experiment 1 the bioassays with 0, 10, 30, and 50 g L−1 of aqueous A. compressus litter leachate were conducted. Experiment 2 was carried out by incorporating 0, 10, 20, 30, 40, and 50 g L−1 of A. compressus litter leachate into soil. In experiment 3, the fate of A. compressus litter leachate phenolics in the soil was investigated. A. compressus leachates did not affect the germination percentage of A. gangetica and P. polystachion, but delayed germination of A. gangetica seeds and decreased seed germination time of P. polystachion. A. compressus litter leachates affected weeds hypocotyl length. Hypocotyl length reductions of 18 and 31% were observed at the highest concentration (50 g L−1) compared to the control in A. gangetica and P. polystachion, respectively. When concentration of A. compressus litter leachate-amended soil increased A. gangetica and P. polystachion seedling shoot length, root length, seedling weight and chlorophyll concentration were not affected. The 5-week decomposition study of A. compressus showed that the phenolic compounds in A. compressus litter abruptly decreased about 52% after two weeks and remained steady until the end of the incubation. PMID:24260020

Allelopathic effects of litter Axonopus compressus against two weedy species and its persistence in soil.

PubMed

Samedani, B; Juraimi, A S; Rafii, M Y; Anuar, A R; Sheikh Awadz, S A; Anwar, M P

2013-01-01

This study investigated the allelopathic effect of Axonopus compressus litter on Asystasia gangetica and Pennisetum polystachion. In experiment 1 the bioassays with 0, 10, 30, and 50 g L⁻¹ of aqueous A. compressus litter leachate were conducted. Experiment 2 was carried out by incorporating 0, 10, 20, 30, 40, and 50 g L⁻¹ of A. compressus litter leachate into soil. In experiment 3, the fate of A. compressus litter leachate phenolics in the soil was investigated. A. compressus leachates did not affect the germination percentage of A. gangetica and P. polystachion, but delayed germination of A. gangetica seeds and decreased seed germination time of P. polystachion. A. compressus litter leachates affected weeds hypocotyl length. Hypocotyl length reductions of 18 and 31% were observed at the highest concentration (50 g L⁻¹) compared to the control in A. gangetica and P. polystachion, respectively. When concentration of A. compressus litter leachate-amended soil increased A. gangetica and P. polystachion seedling shoot length, root length, seedling weight and chlorophyll concentration were not affected. The 5-week decomposition study of A. compressus showed that the phenolic compounds in A. compressus litter abruptly decreased about 52% after two weeks and remained steady until the end of the incubation.

Moving forward with fine-root definitions and research

DOE PAGES

McCormack, M. Luke; Iversen, Colleen M.; Eissenstat, David M.

2016-08-30

Here, in the letter published in this issue of New Phytologist (pp. 310-312), 'Fine roots - functional definition expanded to crop species?' Dr. Zobel emphasizes the importance of heterogeneity within crop-root systems.

Some Sensitivity Studies of Chemical Transport Simulated in Models of the Soil-Plant-Litter System

DOE Office of Scientific and Technical Information (OSTI.GOV)

Begovich, C.L.

2002-10-28

Fifteen parameters in a set of five coupled models describing carbon, water, and chemical dynamics in the soil-plant-litter system were varied in a sensitivity analysis of model response. Results are presented for chemical distribution in the components of soil, plants, and litter along with selected responses of biomass, internal chemical transport (xylem and phloem pathways), and chemical uptake. Response and sensitivity coefficients are presented for up to 102 model outputs in an appendix. Two soil properties (chemical distribution coefficient and chemical solubility) and three plant properties (leaf chemical permeability, cuticle thickness, and root chemical conductivity) had the greatest influence onmore » chemical transport in the soil-plant-litter system under the conditions examined. Pollutant gas uptake (SO{sub 2}) increased with change in plant properties that increased plant growth. Heavy metal dynamics in litter responded to plant properties (phloem resistance, respiration characteristics) which induced changes in the chemical cycling to the litter system. Some of the SO{sub 2} and heavy metal responses were not expected but became apparent through the modeling analysis.« less

DNA analysis of soil extracts can be used to investigate fine root depth distribution of trees

PubMed Central

Bithell, Sean L.; Tran-Nguyen, Lucy T. T.; Hearnden, Mark N.; Hartley, Diana M.

2015-01-01

Understanding the root distribution of trees by soil coring is time-consuming as it requires the separation of roots from soil and classification of roots into particular size classes. This labour-intensive process can limit sample throughput and therefore sampling intensity. We investigated the use of quantitative polymerase chain reaction (qPCR) on soil DNA extractions to determine live fine root DNA density (RDD, mg DNA m−2) for mango (Mangifera indica) trees. The specificity of the qPCR was tested against DNA extracted from 10 mango cultivars and 14 weed species. All mango cultivars and no weeds were detected. Mango DNA was successfully quantified from control soil spiked with mango roots and weed species. The DNA yield of mango root sections stored in moist soil at 23–28 °C declined after 15 days to low concentrations as roots decayed, indicating that dead root materials in moist soil would not cause false-positive results. To separate large roots from samples, a root separation method for field samples was used to target the root fragments remaining in sieved (minimum 2 mm aperture) soil for RDD comparisons. Using this method we compared the seasonal RDD values of fine roots for five mango rootstock cultivars in a field trial. The mean cultivar DNA yields by depth from root fragments in the sieved soil samples had the strongest relationship (adjusted multiple R2 = 0.9307, P < 0.001) with the dry matter (g m−2) of fine (diameter <0.64 mm) roots removed from the soil by sieving. This method provides a species-specific and rapid means of comparing the distribution and concentration of live fine roots of trees in orchards using soil samples up to 500 g. PMID:25552675

The generation and cost of litter resulting from the curbside collection of recycling.

PubMed

Wagner, Travis P; Broaddus, Nathan

2016-04-01

This study examined the generation of litter, defined as spillage and uncollected residue, from a curbside collection system for residential recycling. The primary recycling containers used in the study were 18-gal (68 L), open-top bins. The study, conducted over a seven-week period, was comprised of both an urban and suburban area. Six litter characterizations were conducted in which all new litter larger than 1 in.(2) was collected, segregated, counted, and weighed. We found that each week the open-top recycling bins contributed approximately 20,590 pieces of litter over 1 in. in size per every 1000 households, which resulted in the generation of 3.74 tons of litter per 1000 households per year. In addition to the bins having no top, the primary root causes of the litter were constantly overflowing recycling bins, the method of collection, and material scavenging. Based on an estimated cost of litter cleanup ranging from $0.17 to $0.79 per piece of litter, the direct economic costs from the collection of litter and loss in recycling revenues were estimated at US$3920 to US$19,250 per 1000 households per year. Other notable impacts from the litter, such as increased risk of flood damage from storm drain impairment and marine ecosystem damages exist, but were not monetized. The results strongly suggest that modification of the curbside collection system would decrease the amount and associated cost of litter by replacing existing curbside collection containers with larger volume containers with covers and by modifying the task-based incentive system to emphasize litter prevention rather than the current aim of completing the task most quickly. Copyright © 2016 Elsevier Ltd. All rights reserved.

Root mass, net primary production and turnover in aspen, jack pine and black spruce forests in Saskatchewan and Manitoba, Canada.

PubMed

Steele, Sarah J.; Gower, Stith T.; Vogel, Jason G.; Norman, John M.

1997-01-01

Root biomass, net primary production and turnover were studied in aspen, jack pine and black spruce forests in two contrasting climates. The climate of the Southern Study Area (SSA) near Prince Albert, Saskatchewan is warmer and drier in the summer and milder in the winter than the Northern Study Area (NSA) near Thompson, Manitoba, Canada. Ingrowth soil cores and minirhizotrons were used to quantify fine root net primary production (NPPFR). Average daily fine root growth (m m(-2) day(-1)) was positively correlated with soil temperature at 10-cm depth (r(2) = 0.83-0.93) for all three species, with black spruce showing the strongest temperature effect. At both study areas, fine root biomass (measured from soil cores) and fine root length (measured from minirhizotrons) were less for jack pine than for the other two species. Except for the aspen stands, estimates of NPPFR from minirhizotrons were significantly greater than estimates from ingrowth cores. The core method underestimated NPPFR because it does not account for simultaneous fine root growth and mortality. Minirhizotron NPPFR estimates ranged from 59 g m(-2) year(-1) for aspen stands at SSA to 235 g m(-2) year(-1) for black spruce at NSA. The ratio of NPPFR to total detritus production (aboveground litterfall + NPPFR) was greater for evergreen forests than for deciduous forests, suggesting that carbon allocation patterns differ between boreal evergreen and deciduous forests. In all stands, NPPFR consistently exceeded annual fine root turnover and the differences were larger for stands in the NSA than for stands in the SSA, whereas the difference between study areas was only significant for black spruce. The imbalance between NPPFR and fine root turnover is sufficient to explain the net accumulation of carbon in boreal forest soils.

Linking fine root morphology, hydraulic functioning, and shade tolerance of trees

USDA-ARS?s Scientific Manuscript database

Understanding root traits and trade-offs in their functioning is important for understanding plant functioning in natural ecosystems as well as agricultural systems. The aim of the present study was to determine the relationship between root morphology and the hydraulic characteristics of fine roots...

Root length, biomass, tissue chemistry and mycorrhizal colonization following 14 years of CO2 enrichment and 6 years of N fertilization in a warm temperate forest.

PubMed

Taylor, Benton N; Strand, Allan E; Cooper, Emily R; Beidler, Katilyn V; Schönholz, Marcos; Pritchard, Seth G

2014-09-01

Root systems serve important roles in carbon (C) storage and resource acquisition required for the increased photosynthesis expected in CO2-enriched atmospheres. For these reasons, understanding the changes in size, distribution and tissue chemistry of roots is central to predicting the ability of forests to capture anthropogenic CO2. We sampled 8000 cm(3) soil monoliths in a pine forest exposed to 14 years of free-air-CO2-enrichment and 6 years of nitrogen (N) fertilization to determine changes in root length, biomass, tissue C : N and mycorrhizal colonization. CO2 fumigation led to greater root length (98%) in unfertilized plots, but root biomass increases under elevated CO2 were only found for roots <1 mm in diameter in unfertilized plots (59%). Neither fine root [C] nor [N] was significantly affected by increased CO2. There was significantly less root biomass in N-fertilized plots (19%), but fine root [N] and [C] both increased under N fertilization (29 and 2%, respectively). Mycorrhizal root tip biomass responded positively to CO2 fumigation in unfertilized plots, but was unaffected by CO2 under N fertilization. Changes in fine root [N] and [C] call for further study of the effects of N fertilization on fine root function. Here, we show that the stimulation of pine roots by elevated CO2 persisted after 14 years of fumigation, and that trees did not rely exclusively on increased mycorrhizal associations to acquire greater amounts of required N in CO2-enriched plots. Stimulation of root systems by CO2 enrichment was seen primarily for fine root length rather than biomass. This observation indicates that studies measuring only biomass might overlook shifts in root systems that better reflect treatment effects on the potential for soil resource uptake. These results suggest an increase in fine root exploration as a primary means for acquiring additional soil resources under elevated CO2. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Soil carbon stocks across tropical forests of Panama regulated by base cation effects on fine roots

DOE PAGES

Cusack, Daniela F.; Markesteijn, Lars; Condit, Richard; ...

2018-01-02

We report that tropical forests are the most carbon (C)- rich ecosystems on Earth, containing 25–40% of global terrestrial C stocks. While large-scale quantifi- cation of aboveground biomass in tropical forests has improved recently, soil C dynamics remain one of the largest sources of uncertainty in Earth system models, which inhibits our ability to predict future climate. Globally, soil texture and climate predict B 30% of the variation in soil C stocks, so ecosystem models often predict soil C using measures of aboveground plant growth. However, this approach can underestimate tropical soil C stocks, and has proven inaccurate when comparedmore » with data for soil C in data-rich northern ecosystems. By quantifying soil organic C stocks to 1 m depth for 48 humid tropical forest plots across gradients of rainfall and soil fertility in Panama, we show that soil C does not correlate with common predictors used in models, such as plant biomass or litter production. Instead, a structural equation model including base cations, soil clay content, and rainfall as exogenous factors and root biomass as an endogenous factor predicted nearly 50% of the variation in tropical soil C stocks, indicating a strong indirect effect of base cation availability on tropical soil C storage. Including soil base cations in C cycle models, and thus emphasizing mechanistic links among nutrients, root biomass, and soil C stocks, will improve prediction of climate-soil feedbacks in tropical forests.« less

Soil carbon stocks across tropical forests of Panama regulated by base cation effects on fine roots

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cusack, Daniela F.; Markesteijn, Lars; Condit, Richard

We report that tropical forests are the most carbon (C)- rich ecosystems on Earth, containing 25–40% of global terrestrial C stocks. While large-scale quantifi- cation of aboveground biomass in tropical forests has improved recently, soil C dynamics remain one of the largest sources of uncertainty in Earth system models, which inhibits our ability to predict future climate. Globally, soil texture and climate predict B 30% of the variation in soil C stocks, so ecosystem models often predict soil C using measures of aboveground plant growth. However, this approach can underestimate tropical soil C stocks, and has proven inaccurate when comparedmore » with data for soil C in data-rich northern ecosystems. By quantifying soil organic C stocks to 1 m depth for 48 humid tropical forest plots across gradients of rainfall and soil fertility in Panama, we show that soil C does not correlate with common predictors used in models, such as plant biomass or litter production. Instead, a structural equation model including base cations, soil clay content, and rainfall as exogenous factors and root biomass as an endogenous factor predicted nearly 50% of the variation in tropical soil C stocks, indicating a strong indirect effect of base cation availability on tropical soil C storage. Including soil base cations in C cycle models, and thus emphasizing mechanistic links among nutrients, root biomass, and soil C stocks, will improve prediction of climate-soil feedbacks in tropical forests.« less

Changes in fine root dynamics and distribution along a chronosequence of upland oak-hickory forests

Treesearch

Travis W. Idol; Phillip E. Pope; Felix, Jr. Ponder

1997-01-01

Central Hardwood forests regenerate rapidly following a major disturbance like a clear-cut. The subsequent aboveground growth and development of the resulting stands have been well-documented for these forests. However, the belowground components, specifically the dynamics of fine roots, are not well understood. Fine roots are the main vectors through which plants...

Changes in very fine root respiration and morphology with time since last fire in a boreal forest

NASA Astrophysics Data System (ADS)

Makita, Naoki; Pumpanen, Jukka; Köster, Kajar; Berninger, Frank

2016-04-01

We examined the physiological and morphological responses of individual fine root segments in boreal forests stands with different age since the last fire to determine changes in specific fine root respiration and morphological traits during forest succession. We investigated the respiration of fine roots divided into three diameter classes (<0.5, 0.5-1.0, and 1.0-2.0 mm) in a Finnish boreal Pinus sylvestris L. in forest stands with 5, 45, 63, and 155 years since the last fire. Specific respiration rates of <0.5 mm roots in 155-year-old stands were 74%, 38%, and 31% higher than in 5-, 45-, and 63-year-old stands, respectively. However, the respiration rates of thicker diameter roots did not significantly change among stands with respect to time after fire. Similarly, fire disturbance had a strong impact on morphological traits of <0.5 mm roots, but not on thicker roots. Root respiration rates correlated positively with specific root length (length per unit mass) and negatively with root tissue density (mass per unit volume) in all stand ages. The linear regression lines fitted to the relationships between root respiration and specific root length or root tissue density showed significantly higher intercepts in 63- and 155-year-old than in 5-year-old stands. Significant shifts in the intercept of the common slope of respiration vs. morphology indicate the different magnitude of the changes in physiological performance among the fire age class. Despite a specific small geographic area, we suggest that the recovery of boreal forests following wildfire induces a strategy that favors carbon investment in nutrient and water exploitation efficiency with consequences for higher respiration, length, and lower tissue density of very fine roots.

New dual in-growth core isotopic technique to assess the root litter carbon input to the soil

USDA-ARS?s Scientific Manuscript database

The root-derived carbon (C) input to the soil, whose quantification is often neglected because of methodological difficulties, is considered a crucial C flux for soil C dynamics and net ecosystem productivity (NEP) studies. In the present study, we compared two independent methods to quantify this C...

Soil CO2 evolution and root respiration in 11 year-old Loblolly Pine (Pinus taeda) Plantations as Affected by Moisture and Nutrient Availability

Treesearch

Chris A. Maier; L.W. Kress

2000-01-01

We measured soil CO2 evolution rates with (Sff) and without (Sms) the forest floor litter and root respiration monthly in 11-year-old loblolly pine (Pinus taeda L.) plantations during the fourth year of fertilization and irrigation treatments. Values of Sff...

The relationship between root hydraulics and scion vigour across Vitis rootstocks: what role do root aquaporins play?

PubMed Central

McElrone, A. J.

2012-01-01

Vitis vinifera scions are commonly grafted onto rootstocks of other grape species to influence scion vigour and provide resistance to soil-borne pests and abiotic stress; however, the mechanisms by which rootstocks affect scion physiology remain unknown. This study characterized the hydraulic physiology of Vitis rootstocks that vary in vigour classification by investigating aquaporin (VvPIP) gene expression, fine-root hydraulic conductivity (Lp r), % aquaporin contribution to Lp r, scion transpiration, and the size of root systems. Expression of several VvPIP genes was consistently greater in higher-vigour rootstocks under favourable growing conditions in a variety of media and in root tips compared to mature fine roots. Similar to VvPIP expression patterns, fine-root Lp r and % aquaporin contribution to Lp r determined under both osmotic (Lp r Osm) and hydrostatic (Lp r Hyd) pressure gradients were consistently greater in high-vigour rootstocks. Interestingly, the % aquaporin contribution was nearly identical for Lp r Osm and Lp r Hyd even though a hydrostatic gradient would induce a predominant flow across the apoplastic pathway. In common scion greenhouse experiments, leaf area-specific transpiration (E) and total leaf area increased with rootstock vigour and were positively correlated with fine-root Lp r. These results suggest that increased canopy water demands for scion grafted onto high-vigour rootstocks are matched by adjustments in root-system hydraulic conductivity through the combination of fine-root Lp r and increased root surface area. PMID:23136166

Root biomass, turnover and net primary productivity of a coffee agroforestry system in Costa Rica: effects of soil depth, shade trees, distance to row and coffee age.

PubMed

Defrenet, Elsa; Roupsard, Olivier; Van den Meersche, Karel; Charbonnier, Fabien; Pastor Pérez-Molina, Junior; Khac, Emmanuelle; Prieto, Iván; Stokes, Alexia; Roumet, Catherine; Rapidel, Bruno; de Melo Virginio Filho, Elias; Vargas, Victor J; Robelo, Diego; Barquero, Alejandra; Jourdan, Christophe

2016-08-21

In Costa Rica, coffee (Coffea arabica) plants are often grown in agroforests. However, it is not known if shade-inducing trees reduce coffee plant biomass through root competition, and hence alter overall net primary productivity (NPP). We estimated biomass and NPP at the stand level, taking into account deep roots and the position of plants with regard to trees. Stem growth and root biomass, turnover and decomposition were measured in mixed coffee/tree (Erythrina poeppigiana) plantations. Growth ring width and number at the stem base were estimated along with stem basal area on a range of plant sizes. Root biomass and fine root density were measured in trenches to a depth of 4 m. To take into account the below-ground heterogeneity of the agroforestry system, fine root turnover was measured by sequential soil coring (to a depth of 30 cm) over 1 year and at different locations (in full sun or under trees and in rows/inter-rows). Allometric relationships were used to calculate NPP of perennial components, which was then scaled up to the stand level. Annual ring width at the stem base increased up to 2·5 mm yr -1 with plant age (over a 44-year period). Nearly all (92 %) coffee root biomass was located in the top 1·5 m, and only 8 % from 1·5 m to a depth of 4 m. Perennial woody root biomass was 16 t ha -1 and NPP of perennial roots was 1·3 t ha -1 yr -1 Fine root biomass (0-30 cm) was two-fold higher in the row compared with between rows. Fine root biomass was 2·29 t ha -1 (12 % of total root biomass) and NPP of fine roots was 2·96 t ha -1 yr -1 (69 % of total root NPP). Fine root turnover was 1·3 yr -1 and lifespan was 0·8 years. Coffee root systems comprised 49 % of the total plant biomass; such a high ratio is possibly a consequence of shoot pruning. There was no significant effect of trees on coffee fine root biomass, suggesting that coffee root systems are very competitive in the topsoil. © The Author 2016. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Long-Term Effects of Season of Prescribed Burn on the Fine-Root Growth, Root Carbohydrates, and Foliar Dynamics of Mature Longleaf Pine

Treesearch

Eric A. Kuehler; Mary Anne Sword Sayer; James D. Haywood; C. Dan Andries

2004-01-01

Depending on the season and intensity of fire, as well as the phenology of foliage and new root growth, fire may damage foliage, and subsequently decrease whole-crown carbon fixation and allocation to the root system. In central Louisiana the authors investigated how season of prescribed burning affects fine-root dynamics, root carbohydrate relations, and leaf area...

Distribution of fine roots of ponderosa pine and Douglas-fir in a central Idaho forest

Treesearch

Gabriel Dumm; Lauren Fins; Russell T. Graham; Theresa B. Jain

2008-01-01

This study describes soil horizon depth and fine root distribution in cores collected at two distances from the boles of Douglas-fir and ponderosa pine trees at a study site in a central Idaho forest. Concentration and content of fine roots extracted from soil cores were compared among species, soil horizons, tree size, and distance from bole. Approximately 80% of...

Effects of flow scarcity on leaf-litter processing under oceanic climate conditions in calcareous streams.

PubMed

Martínez, Aingeru; Pérez, Javier; Molinero, Jon; Sagarduy, Mikel; Pozo, Jesús

2015-01-15

Although temporary streams represent a high proportion of the total number and length of running waters, historically the study of intermittent streams has received less attention than that of perennial ones. The goal of the present study was to assess the effects of flow cessation on litter decomposition in calcareous streams under oceanic climate conditions. For this, leaf litter of alder was incubated in four streams (S1, S2, S3 and S4) with different flow regimes (S3 and S4 with zero-flow periods) from northern Spain. To distinguish the relative importance and contribution of decomposers and detritivores, fine- and coarse-mesh litter bags were used. We determined processing rates, leaf-C, -N and -P concentrations, invertebrate colonization in coarse bags and benthic invertebrates. Decomposition rates in fine bags were similar among streams. In coarse bags, only one of the intermittent streams, S4, showed a lower rate than that in the other ones as a consequence of lower invertebrate colonization. The material incubated in fine bags presented higher leaf-N and -P concentrations than those in the coarse ones, except in S4, pointing out that the decomposition in this stream was driven mainly by microorganisms. Benthic macroinvertebrate and shredder density and biomass were lower in intermittent streams than those in perennial ones. However, the bags in S3 presented a greater amount of total macroinvertebrates and shredders comparing with the benthos. The most suitable explanation is that the fauna find a food substrate in bags less affected by calcite precipitation, which is common in the streambed at this site. Decomposition rate in coarse bags was positively related to associated shredder biomass. Thus, droughts in streams under oceanic climate conditions affect mainly the macroinvertebrate detritivore activity, although macroinvertebrates may show distinct behavior imposed by the physicochemical properties of water, mainly travertine precipitation, which can override the flow intermittence effects. Copyright © 2014. Published by Elsevier B.V.

CO2 and N-fertilization effects on fine-root length, production, and mortality: a 4-year ponderosa pine study.

PubMed

Phillips, Donald L; Johnson, Mark G; Tingey, David T; Storm, Marjorie J; Ball, J Timothy; Johnson, Dale W

2006-06-01

We conducted a 4-year study of juvenile Pinus ponderosa fine root (< or =2 mm) responses to atmospheric CO2 and N-fertilization. Seedlings were grown in open-top chambers at three CO2 levels (ambient, ambient+175 mumol/mol, ambient+350 mumol/mol) and three N-fertilization levels (0, 10, 20 g m(-2) year(-1)). Length and width of individual roots were measured from minirhizotron video images bimonthly over 4 years starting when the seedlings were 1.5 years old. Neither CO2 nor N-fertilization treatments affected the seasonal patterns of root production or mortality. Yearly values of fine-root length standing crop (m m(-2)), production (m m(-2) year(-1)), and mortality (m m(-2) year(-1)) were consistently higher in elevated CO2 treatments throughout the study, except for mortality in the first year; however, the only statistically significant CO2 effects were in the fine-root length standing crop (m m(-2)) in the second and third years, and production and mortality (m m(-2) year(-1)) in the third year. Higher mortality (m m(-2) year(-1)) in elevated CO2 was due to greater standing crop rather than shorter life span, as fine roots lived longer in elevated CO2. No significant N effects were noted for annual cumulative production, cumulative mortality, or mean standing crop. N availability did not significantly affect responses of fine-root standing crop, production, or mortality to elevated CO2. Multi-year studies at all life stages of trees are important to characterize belowground responses to factors such as atmospheric CO2 and N-fertilization. This study showed the potential for juvenile ponderosa pine to increase fine-root C pools and C fluxes through root mortality in response to elevated CO2.

Effects of prolonged drought stress on Scots pine seedling carbon allocation.

PubMed

Aaltonen, Heidi; Lindén, Aki; Heinonsalo, Jussi; Biasi, Christina; Pumpanen, Jukka

2017-04-01

As the number of drought occurrences has been predicted to increase with increasing temperatures, it is believed that boreal forests will become particularly vulnerable to decreased growth and increased tree mortality caused by the hydraulic failure, carbon starvation and vulnerability to pests following these. Although drought-affected trees are known to have stunted growth, as well as increased allocation of carbon to roots, still not enough is known about the ways in which trees can acclimate to drought. We studied how drought stress affects belowground and aboveground carbon dynamics, as well as nitrogen uptake, in Scots pine (Pinus sylvestris L.) seedlings exposed to prolonged drought. Overall 40 Scots pine seedlings were divided into control and drought treatments over two growing seasons. Seedlings were pulse-labelled with 13CO2 and litter bags containing 15N-labelled root biomass, and these were used to follow nutrient uptake of trees. We determined photosynthesis, biomass distribution, root and rhizosphere respiration, water potential, leaf osmolalities and carbon and nitrogen assimilation patterns in both treatments. The photosynthetic rate of the drought-induced seedlings did not decrease compared to the control group, the maximum leaf specific photosynthetic rate being 0.058 and 0.045 µmol g-1 s-1 for the drought and control treatments, respectively. The effects of drought were, however, observed as lower water potentials, increased osmolalities as well as decreased growth and greater fine root-to-shoot ratio in the drought-treated seedlings. We also observed improved uptake of labelled nitrogen from soil to needles in the drought-treated seedlings. The results indicate acclimation of seedlings to long-term drought by aiming to retain sufficient water uptake with adequate allocation to roots and root-associated mycorrhizal fungi. The plants seem to control water potential with osmolysis, for which sufficient photosynthetic capability is needed. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Root controls on soil microbial community structure in forest soils.

PubMed

Brant, Justin B; Myrold, David D; Sulzman, Elizabeth W

2006-07-01

We assessed microbial community composition as a function of altered above- and belowground inputs to soil in forest ecosystems of Oregon, Pennsylvania, and Hungary as part of a larger Detritus Input and Removal Treatment (DIRT) experiment. DIRT plots, which include root trenching, aboveground litter exclusion, and doubling of litter inputs, have been established in forested ecosystems in the US and Europe that vary with respect to dominant tree species, soil C content, N deposition rate, and soil type. This study used phospholipid fatty-acid (PLFA) analysis to examine changes in the soil microbial community size and composition in the mineral soil (0-10 cm) as a result of the DIRT treatments. At all sites, the PLFA profiles from the plots without roots were significantly different from all other treatments. PLFA analysis showed that the rootless plots generally contained larger quantities of actinomycete biomarkers and lower amounts of fungal biomarkers. At one of the sites in an old-growth coniferous forest, seasonal changes in PLFA profiles were also examined. Seasonal differences in soil microbial community composition were greater than treatment differences. Throughout the year, treatments without roots continued to have a different microbial community composition than the treatments with roots, although the specific PLFA biomarkers responsible for these differences varied by season. These data provide direct evidence that root C inputs exert a large control on microbial community composition in the three forested ecosystems studied.

Differential responses of grapevine rootstocks to water stress are associated with adjustments in fine root hydraulic physiology and suberization

USDA-ARS?s Scientific Manuscript database

Water deficits are known to alter fine root structure and function, but little is known about how these responses contribute to differences in drought resistance across grapevine rootstocks. We studied how water deficit affects root anatomical and physiological characteristics in two grapevine root...

Desirable plant root traits for protecting unstable slopes against landslides

NASA Astrophysics Data System (ADS)

Stokes, A.; Atger, C.; Bengough, G.; Fourcaud, T.; Sidle, R. C.

2009-04-01

A trait is defined as a distinct, quantitative property of organisms, usually measured at the individual level and used comparatively across species. Plant quantitative traits are extremely important for understanding the local ecology of any site. Plant height, architecture, root depth, wood density, leaf size and leaf nitrogen concentration control ecosystem processes and define habitat for other taxa. An engineer conjecturing as to how plant traits may directly influence physical processes occurring on sloping land just needs to consider how e.g. canopy architecture and litter properties influence the partitioning of rainfall among interception loss, infiltration and runoff. Plant traits not only influence abiotic processes occurring at a site, but also the habitat for animals and invertebrates. Depending on the goal of the landslide engineer, the immediate and long-term effects of plant traits in an environment must be considered if a site is to remain viable and ecologically successful. When vegetation is considered in models of slope stability, usually the only root parameters taken into consideration are tensile strength and root area ratio. Root system spatial structure is not considered, although the length, orientation and diameter of roots are recognized as being of importance. Thick roots act like soil nails on slopes, reinforcing soil in the same way that concrete is reinforced with steel rods. The spatial position of these thick roots also has an indirect effect on soil fixation in that the location of thin and fine roots will depend on the arrangement of thick roots. Thin and fine roots act in tension during failure on slopes and if they cross the slip surface, are largely responsible for reinforcing soil on slopes. Therefore, the most important trait to consider initially is rooting depth. To stabilize a slope against a shallow landslide, roots must cross the shear surface. The number and thickness of roots in this zone will therefore largely determine slope stability. Rooting depth is species dependent when soil conditions are not limiting and the number of horizontal lateral roots borne on the vertical roots usually changes with depth. Therefore, the number and orientation of roots that the shear surface intersects will change significantly with rooting depth for the same plant, even for magnitudes of only several cm. Similarly, depending on the geometry of the root system, the angle at which a root crosses the shear surface can also have an influence on its resistance to pullout and breakage. The angle at which a root emerges from the parent root is dependent on root type, depth and species (when soil conditions are not limiting). Due to the physiology of roots, a root branch can be initiated at any point along a parent root, but not necessarily emerge fully from the parent root. These traits, along with others including size, relative growth rate, regeneration strategies, wood structure and strength will be discussed with regard to their influence on slope stability. How each of these traits is influenced by soil conditions and plantation techniques is also of extreme importance to the landslide engineer. The presence of obstacles in the soil, as well as compaction, affects root length and branching pattern. Roots of many species of woody plants on shallow soils also tend to grow along fractures deep into the underlying bedrock which allows roots to locate supplies of nutrient and water rich pockets. Rooting depths of herbaceous species in water-limited environments are highly correlated with infiltration depth, but waterlogged soils can asphyxiate tree roots, resulting in shallow root systems. The need to understand and integrate each of these traits for a species is not easy. Therefore, we suggest a hierarchy whereby traits are considered in order of importance, along with how external factors influence their expression over time.

A worldview of root traits: the influence of ancestry, growth form, climate and mycorrhizal association on the functional trait variation of fine-root tissues in seed plants.

PubMed

Valverde-Barrantes, Oscar J; Freschet, Grégoire T; Roumet, Catherine; Blackwood, Christopher B

2017-09-01

Fine-root traits play key roles in ecosystem processes, but the drivers of fine-root trait diversity remain poorly understood. The plant economic spectrum (PES) hypothesis predicts that leaf and root traits evolved in coordination. Mycorrhizal association type, plant growth form and climate may also affect root traits. However, the extent to which these controls are confounded with phylogenetic structuring remains unclear. Here we compiled information about root and leaf traits for > 600 species. Using phylogenetic relatedness, climatic ranges, growth form and mycorrhizal associations, we quantified the importance of these factors in the global distribution of fine-root traits. Phylogenetic structuring accounts for most of the variation for all traits excepting root tissue density, with root diameter and nitrogen concentration showing the strongest phylogenetic signal and specific root length showing intermediate values. Climate was the second most important factor, whereas mycorrhizal type had little effect. Substantial trait coordination occurred between leaves and roots, but the strength varied between growth forms and clades. Our analyses provide evidence that the integration of roots and leaves in the PES requires better accounting of the variation in traits across phylogenetic clades. Inclusion of phylogenetic information provides a powerful framework for predictions of belowground functional traits at global scales. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Fine-root biomass and fluxes of soil carbon in young stands of paper birch and trembling aspen as affected by elevated atmospheric CO2 and tropospheric O3

Treesearch

J. S. King; K. S. Pregitzer; D. R. Zak; J. Sober; J. G. Isebrands; R. E. Dickson; G. R. Hendrey; D. F. Karnosky

2001-01-01

Rising atmospheric CO2 may stimulate future forest productivity, possibly increasing carbon storage in terrestrial ecosystems, but how tropospheric ozone will modify this response is unknown. Because of the importance of fine roots to the belowground C cycle, we monitored fine-root biomass and associated C fluxes in regenerating stands of...

Mean Annual Temperature Drives Microbial Nitrogen Cycling and Fine Root Nutrient Foraging Across a Tropical Montane Wet Forest Elevation Gradient

NASA Astrophysics Data System (ADS)

Pierre, S.; Litton, C. L. M.; Giardina, C. P.; Sparks, J. P.; Groffman, P. M.; Hewson, I.; Fahey, T. J.

2017-12-01

Mean annual temperature (MAT) is positively correlated with rates of primary production and carbon (C) turnover in forests globally, but the underlying biotic drivers of these relationships remain poorly resolved. We hypothesized that (1) MAT increases nitrifier abundance and thereby nitrate (NO-) bioavailability in soils and (2) increased NO- bioavailability reduces fine root nitrogen (N) demand. We used an ecologically well-constrained natural elevation gradient (13˚C -18˚C) in a tropical wet motane forest on the Island of Hawaii to study to role of MAT in situ. Our previous work showed that MAT drives increased soil NO- bioavailability in situ (r²=0.79, P=0.003), and indicated that the abundance of ammonia oxidizing archaea is strongly and positively correlated with MAT in situ (r²=0.34, P<0.001; Pierre et. al. 2017). Using fertilized fine root ingrowth cores (+N, +P, +N+P, control) across the same MAT gradient, we found that increasing MAT and bulk soil NO- bioavailability produced a significant negative fine root response to the +N+P treatment (P=0.023), and no response to other fertilization treatments. Increasing MAT and soil NO- bioavailability led to increased percent arbuscular mycorrhizal (AM) colonization of fine roots (r²=0.43, P=0.004), but no treatment effect on AM colonization was observed. Our results suggest that N and P generally co-limit fine root foraging across the gradient, while higher MAT and bulk soil NO- bioavailability interact to reduce fine root foraging effort. Further, higher MAT and greater N fertility in soils may reduce the C limitation of AM fungal colonization. We conclude that MAT drives N-rich conditions, which allow for lower N foraging effort, but greater C investment in P acquisition through AM fine root colonization.

Prescribed fire effects on field-derived and simulated forest carbon stocks over time

Treesearch

Nicole M. Vaillant; Alicia L. Reiner; Erin K. Noonan-Wright

2013-01-01

To better understand the impact of prescribed fire on carbon stocks, we quantified aboveground and belowground carbon stocks within five pools (live trees and coarse roots, dead trees and coarse roots, live understory vegetation, down woody debris, and litter and duff) and potential carbon emissions from a simulated wildfire before and up to 8 years after prescribed...

Growth and mycorrhizal community structure of Pinus sylvestris seedlings following the addition of forest litter.

PubMed

Aucina, Algis; Rudawska, Maria; Leski, Tomasz; Skridaila, Audrius; Riepsas, Edvardas; Iwanski, Michal

2007-08-01

We report the effects of pine and oak litter on species composition and diversity of mycorrhizal fungi colonizing 2-year-old Pinus sylvestris L. seedlings grown in a bare-root nursery in Lithuania. A layer of pine or oak litter was placed on the surface of the nursery bed soil to mimic natural litter cover. Oak litter amendment appeared to be most favorable for seedling survival, with a 73% survival rate, in contrast to the untreated mineral bed soil (44%). The concentrations of total N, P, K, Ca, and Mg were higher in oak growth medium than in pine growth medium. Relative to the control (pH 6.1), the pH was lower in pine growth medium (5.8) and higher in oak growth medium (6.3). There were also twofold and threefold increases in the C content of growth medium with the addition of pine and oak litter, respectively. Among seven mycorrhizal morphotypes, eight different mycorrhizal taxa were identified: Suillus luteus, Suillus variegatus, Wilcoxina mikolae, a Tuber sp., a Tomentella sp., Cenococcum geophilum, Amphinema byssoides, and one unidentified ectomycorrhizal symbiont. Forest litter addition affected the relative abundance of mycorrhizal symbionts more than their overall representation. This was more pronounced for pine litter than for oak litter, with 40% and 25% increases in the abundance of suilloid mycorrhizae, respectively. Our findings provide preliminary evidence that changes in the supply of organic matter through litter manipulation may have far-reaching effects on the chemistry of soil, thus influencing the growth and survival of Scots pine seedlings and their mycorrhizal communities.

Contrasting fine-root production, survival and soil CO2 efflux in pine and poplar plantation

Treesearch

M. D. Coleman; Richard E. Dickson; J. G. Isebrands

2000-01-01

Tree root activity, including fine-root production, turnover and metabolic activity are significant components of forest productivity and nutrient cycling. Differences in root activity among forest types are not well known. A 3-year study was undertaken in red pine (Pinus resinosa Ait.) and hybrid poplar (Populus tristis X P.

Contrasting fine-root production, survival and soil CO2 efflux in pine and poplar plantations

Treesearch

M.D. Coleman; R.E. Dickson; J.G. Isebrands

2000-01-01

Tree root activity, including fine-root production, turnover and metabolic activity are significant components of forest productivity and nutrient cycling. Differences in root activity among forest types are not well known. A 3-year study was undertaken in red pine (Pinus resinosa Ait.) and hybrid poplar (Populus tristis X P.

How interacting fungal species and mineral nitrogen inputs affect transfer of nitrogen from litter via arbuscular mycorrhizal mycelium.

PubMed

He, Yuejun; Cornelissen, J Hans C; Zhong, Zhangcheng; Dong, Ming; Jiang, Changhong

2017-04-01

In the karst landscape, widespread in the world including southern China, soil nutrient supply is strongly constrained. In such environments, arbuscular mycorrhizal (AM) fungi may facilitate plant nutrient uptake. However, the possible role of different AM fungal species, and their interactions, especially in transferring nitrogen (N) from litter to plant, is poorly understood. We conducted two microcosm experiments to investigate the role that two karst soil AM fungi, Glomus etunicatum and Glomus mosseae, play in the transfer of N from decomposing litter to the host plant and to determine how N availability influences these processes. In experiment 1, Cinnamomum camphora tree seedlings were grown in compartments inoculated with G. etunicatum. Lolium perenne leaf litter labeled with δ 15 N was added to the soil in unplanted compartments. Compartments containing the δ 15 N labeled litter were either accessible to hyphae but not to seedling roots or were not accessible to hyphae or roots. The addition of mineral N to one of the host compartments at the start of the experiment significantly increased the biomass of the C. camphora seedlings, N content and N:P ratio, AM mycelium length, and soil microbial biomass carbon and N. However, significantly, more δ 15 N was acquired, from the leaf litter by the AM hyphae and transferred to the host when mineral N was not added to the soil. In experiment 2, in which C. camphora seedlings were inoculated with both G. etunicatum and G. mosseae rather than with G. mosseae alone, there was a significant increase in mycelial growth (50.21%), in soil microbial biomass carbon (417.73%) in the rhizosphere, and in the amount of δ 15 N that was transferred to the host. These findings suggest that maintaining AM fungal diversity in karst soils could be important for mediating N transfer from organic material to host plants in N-poor soils.

Effects of dietary coarsely ground corn and 3 bedding floor types on broiler live performance, litter characteristics, gizzard and proventriculus weight, and nutrient digestibility.

PubMed

Xu, Y; Lin, Y M; Stark, C R; Ferket, P R; Williams, C M; Brake, J

2017-07-01

The effects of zero or 50% dietary coarsely ground corn (CC) in pelleted and screened grower and finisher diets on broilers reared on 3 bedding floor types (plastic net [NET], new pine wood shavings litter [NEW], or old pine wood shavings litter [OLD]) on broiler live performance, litter characteristics, gizzard and proventriculus weight, and apparent ileal digestibility (AID) were studied in a 2 × 3 factorial arrangement of treatments. Fine corn was produced with a hammermill (271 μm) and CC with a roller mill (1145 μm). Utilization of CC reduced milling cost by 9.47 cents per MT with similar nutrient content of screened pellets. The 50% CC treatment exhibited improved (P ≤ 0.05) feed intake at 42 d (2.5%) and 49 d (3.0%), and BW (5.4%) and FCR from 28 d (1.4%). Birds on NEW litter exhibited improved (P < 0.05) BW at 28 and 35 d and 42 d FCR as compared to NET and 49 d FCR compared to NET and OLD. The 50% CC treatment exhibited increased (P < 0.05) gizzard weight but decreased proventriculus weight at 49 d. NEW litter birds exhibited increased (P ≤ 0.05) gizzard weight at 28 d and 49 d and decreased proventriculus weight as compared to NET at 49 days. The 50% CC treatment exhibited decreased (P ≤ 0.05) litter moisture at 35 and 42 d, litter N at 35 and 49 d, and litter pH at 49 days. OLD litter birds exhibited greater (P < 0.05) litter N at 14, 35, and 49 d, as well as litter moisture, pH, and ammonia concentration at 49 days. The 50% CC group also exhibited improved AID of nitrogen (P < 0.05). Broilers fed pelleted and screened diets containing 50% CC exhibited improved live performance and reduced litter moisture while use of NEW litter resulted in a somewhat similar effect, which indicated that consumption of NEW litter also facilitated gastric development and function. © 2017 Poultry Science Association Inc.

Effects of simulated acid rain on soil respiration and its components in a subtropical mixed conifer and broadleaf forest in southern China.

PubMed

Liang, Guohua; Hui, Dafeng; Wu, Xiaoying; Wu, Jianping; Liu, Juxiu; Zhou, Guoyi; Zhang, Deqiang

2016-02-01

Soil respiration is a major pathway in the global carbon cycle and its response to environmental changes is an increasing concern. Here we explored how total soil respiration (RT) and its components respond to elevated acid rain in a mixed conifer and broadleaf forest, one of the major forest types in southern China. RT was measured twice a month in the first year under four treatment levels of simulated acid rain (SAR: CK, the local lake water, pH 4.7; T1, water pH 4.0; T2, water pH 3.25; and T3, water pH 2.5), and in the second year, RT, litter-free soil respiration (RS), and litter respiration (RL) were measured simultaneously. The results indicated that the mean rate of RT was 2.84 ± 0.20 μmol CO2 m(-2) s(-1) in the CK plots, and RS and RL contributed 60.7% and 39.3% to RT, respectively. SAR marginally reduced (P = 0.08) RT in the first year, but significantly reduced RT and its two components in the second year (P < 0.05). The negative effects were correlated with the decrease in soil microbial biomass and fine root biomass due to soil acidification under the SAR. The temperature coefficients (Q10) of RT and its two components generally decreased with increasing levels of the SAR, but only the decrease of RT and RL was significant (P < 0.05). In addition, the contribution of RL to RT decreased significantly under the SAR, indicating that RL was more sensitive to the SAR than RS. In the context of elevated acid rain, the decline trend of RT in the forests in southern China appears to be attributable to the decline of soil respiration in the litter layer.

Responses of nutrient capture and fine root morphology of subalpine coniferous tree Picea asperata to nutrient heterogeneity and competition

PubMed Central

Nan, Hongwei; Liang, Jin; Cheng, Xinying; Zhao, ChunZhang; Yin, HuaJun; Yin, ChunYing; Liu, Qing

2017-01-01

Investigating the responses of trees to the heterogeneous distribution of nutrients in soil and simultaneous presence of neighboring roots could strengthen the understanding of an influential mechanism on tree growth and provide a scientific basis for forest management. Here, we conducted two split-pot experiments to investigate the effects of nutrient heterogeneity and intraspecific competition on the fine root morphology and nutrient capture of Picea asperata. The results showed that P. asperata efficiently captured nutrients by increasing the specific root length (SRL) and specific root area (SRA) of first-and second-order roots and decreasing the tissue density of first-order roots to avoid competition for resources and space with neighboring roots. The nutrient heterogeneity and addition of fertilization did not affect the fine root morphology, but enhanced the P and K concentrations in the fine roots in the absence of a competitor. On the interaction between nutrient heterogeneity and competition, competition decreased the SRL and SRA but enhanced the capture of K under heterogeneous soil compared with under homogeneous soil. Additionally, the P concentration, but not the K concentration, was linearly correlated to root morphology in heterogeneous soil, even when competition was present. The results suggested that root morphological features were only stimulated when the soil nutrients were insufficient for plant growth and the nutrients accumulations by root were mainly affected by the soil nutrients more than the root morphology. PMID:29095947

Effects of earthworms on slopewash, surface runoff, and fine-litter transport on a humid-tropical forested hillslope in eastern Puerto Rico: Chapter G in Water quality and landscape processes of four watersheds in eastern Puerto Rico

USGS Publications Warehouse

Larsen, Matthew C.; Liu, Zhigang Liu; Zou, Xiaoming; Murphy, Sheila F.; Stallard, Robert F.

2012-01-01

Rainfall, slopewash (the erosion of soil particles), surface runoff, and fine-litter transport were measured in tropical wet forest on a hillslope in the Luquillo Experimental Forest, Puerto Rico, from February 1998 until April 2000. Slopewash data were collected using Gerlach troughs at eight plots, each 2 square meters in area. Earthworms were excluded by electroshocking from four randomly selected plots. The other four (control) plots were undisturbed. During the experiment, earthworm population in the electroshocked plots was reduced by 91 percent. At the end of the experiment, the electroshocked plots had 13 percent of earthworms by count and 6 percent by biomass as compared with the control plots. Rainfall during the sampling period (793 days) was 9,143 millimeters. Mean and maximum rainfall by sampling period (mean of 16 days) were 189 and 563 millimeters, respectively. Surface runoff averaged 0.6 millimeters and 1.2 millimeters by sampling period for the control and experimental plots, equal to 0.25 and 0.48 percent of mean rainfall, respectively. Disturbance of the soil environment by removal of earthworms doubled runoff and increased the transport (erosion) of soil and organic material by a factor of 4.4. When earthworms were removed, the erosion of mineral soil (soil mass left after ashing) and the transport of fine litter were increased by a factor of 5.3 and 3.4, respectively. It is assumed that increased runoff is a function of reduced soil porosity, resulting from decreased burrowing and reworking of the soil in the absence of earthworms. The background, or undisturbed, downslope transport of soil, as determined from the control plots, was 51 kilograms per hectare and the "disturbance" rate, determined from the experimental plots, was 261 kilograms per hectare. The background rate for downslope transport of fine litter was 71 kilograms per hectare and the disturbance rate was 246 kilograms per hectare. Data from this study indicate that the reduction in soil macrofauna population, in this case, earthworms, plays a key role in increasing runoff and soil erosion and, therefore, has important implications for forest and water management.

[Responses of forest soil carbon pool and carbon cycle to the changes of carbon input].

PubMed

Wang, Qing-kui

2011-04-01

Litters and plant roots are the main sources of forest soil organic carbon (C). This paper summarized the effects of the changes in C input on the forest soil C pool and C cycle, and analyzed the effects of these changes on the total soil C, microbial biomass C, dissoluble organic C, and soil respiration. Different forests in different regions had inconsistent responses to C input change, and the effects of litter removal or addition and of root exclusion or not differed with tree species and regions. Current researches mainly focused on soil respiration and C pool fractions, and scarce were about the effects of C input change on the changes of soil carbon structure and stability as well as the response mechanisms of soil organisms especially soil fauna, which should be strengthened in the future.

Role of allelopathy as a possible factor associated with the rising dominance ofBunias orientalis L. (Brassicaceae) in some native plant assemblages.

PubMed

Dietz, H; Steinlein, T; Winterhalter, P; Ullmann, I

1996-10-01

Leaf extracts ofBunias orientalis were shown to inhibit seed germination of a variety of cultivar plant species and of species cooccurring withB. orientalis in the field. Root exudate solutions and leaf litter leachates ofB. orientalis were tested for their allelopathic activity using seedling growth assays. Additionally, in comparative seedling growth assays soil cores removed from denseB. orientalis stands were tested bimonthly for elevated allelopathic effects. The impact of root exudates on seedling growth was generally weak and varied between species. Similar results were obtained for the effect ofB. orientalis leaf litter leachates on seedlings grown in sand culture relative to the effect of leaf litter leachates of a plant species mixture. When soil as a growth substrate was used, no consistent differences in seedling growth were obtained between the two litter leachate treatments. In the soil core experiment seedlings grown in soil cores collected from a denseB. orientalis stand unexpectedly showed better performance than seedlings grown in soil cores collected from a nearby mixed plant stand withoutB. orientalis, at least in early spring and late autumn. Predominating nutrient effects are, therefore, assumed to conceal a potentially increased allelopathic effect of soil beneath denseB. orientalis stands. It is concluded that other factors than allelopathy must be investigated to explain the rapid establishment of dense stands of this alien plant species.

Fine root heterogeneity by branch order: exploring the discrepancy in root turnover estimates between minirhizotron and carbon isotopic methods

Treesearch

Dali Guo; Harbin Li; Robert J. Mitchell; Han Wenxuan; Joseph J. Hendricks; Timothy J. Fahey; Ronald L. Hendrick

2008-01-01

Fine roots constitute a large and dynamic component of the carbon cycles of terrestrial ecosystems. The reported fivefold discrepancy in turnover estimates between median longevity (ML) from minirhizotrons and mean residence time (MRT) using carbon isotopes may have global consequences.

Antioxidant tannins from stem bark and fine root of Casuarina equisetifolia.

PubMed

Zhang, Shang-Ju; Lin, Yi-Ming; Zhou, Hai-Chao; Wei, Shu-Dong; Lin, Guang-Hui; Ye, Gong-Fu

2010-08-16

Structures of condensed tannins from the stem bark and fine root of Casuarina equisetifolia were identified using MALDI-TOF MS and HPLC analyses. The condensed tannins from stem bark and fine root consist predominantly of procyanidin combined with prodelphinidin and propelargonidin, and epicatechin is the main extension unit. The condensed tannins had different polymer chain lengths, varying from trimers to tridecamer for stem bark and to pentadecamer for fine root. The antioxidant activities were measured by two models: 1,1-diphenyl-2- picrylhydrazyl (DPPH) radical scavenging activity and ferric reducing/ antioxidant power (FRAP). The condensed tannins extracted from C. equisetifolia showed very good DPPH radical scavenging activity and ferric reducing/ antioxidant power, suggesting that these extracts may be considered as new sources of natural antioxidants for food and nutraceutical products.

Parallel evolution of storage roots in morning glories (Convolvulaceae).

PubMed

Eserman, Lauren A; Jarret, Robert L; Leebens-Mack, James H

2018-05-29

Storage roots are an ecologically and agriculturally important plant trait that have evolved numerous times in angiosperms. Storage roots primarily function to store carbohydrates underground as reserves for perennial species. In morning glories, storage roots are well characterized in the crop species sweetpotato, where starch accumulates in storage roots. This starch-storage tissue proliferates, and roots thicken to accommodate the additional tissue. In morning glories, storage roots have evolved numerous times. The primary goal of this study is to understand whether this was through parallel evolution, where species use a common genetic mechanism to achieve storage root formation, or through convergent evolution, where storage roots in distantly related species are formed using a different set of genes. Pairs of species where one forms storage roots and the other does not were sampled from two tribes in the morning glory family, the Ipomoeeae and Merremieae. Root anatomy in storage roots and fine roots was examined. Furthermore, we sequenced total mRNA from storage roots and fine roots in these species and analyzed differential gene expression. Anatomical results reveal that storage roots of species in the Ipomoeeae tribe, such as sweetpotato, accumulate starch similar to species in the Merremieae tribe but differ in vascular tissue organization. In both storage root forming species, more genes were found to be upregulated in storage roots compared to fine roots. Further, we find that fifty-seven orthologous genes were differentially expressed between storage roots and fine roots in both storage root forming species. These genes are primarily involved in starch biosynthesis, regulation of starch biosynthesis, and transcription factor activity. Taken together, these results demonstrate that storage roots of species from both morning glory tribes are anatomically different but utilize a common core set of genes in storage root formation. This is consistent with a pattern of parallel evolution, thus highlighting the importance of examining anatomy together with gene expression to understand the evolutionary origins of ecologically and economically important plant traits.

Plant traits and decomposition: are the relationships for roots comparable to those for leaves?

PubMed Central

Birouste, Marine; Kazakou, Elena; Blanchard, Alain; Roumet, Catherine

2012-01-01

Background and Aims Fine root decomposition is an important determinant of nutrient and carbon cycling in grasslands; however, little is known about the factors controlling root decomposition among species. Our aim was to investigate whether interspecific variation in the potential decomposition rate of fine roots could be accounted for by root chemical and morphological traits, life history and taxonomic affiliation. We also investigated the co-ordinated variation in root and leaf traits and potential decomposition rates. Methods We analysed potential decomposition rates and the chemical and morphological traits of fine roots on 18 Mediterranean herbaceous species grown in controlled conditions. The results were compared with those obtained for leaves in a previous study conducted on similar species. Key Results Differences in the potential decomposition rates of fine roots between species were accounted for by root chemical composition, but not by morphological traits. The root potential decomposition rate varied with taxonomy, but not with life history. Poaceae, with high cellulose concentration and low concentrations of soluble compounds and phosphorus, decomposed more slowly than Asteraceae and Fabaceae. Patterns of root traits, including decomposition rate, mirrored those of leaf traits, resulting in a similar species clustering. Conclusions The highly co-ordinated variation of roots and leaves in terms of traits and potential decomposition rate suggests that changes in the functional composition of communities in response to anthropogenic changes will strongly affect biogeochemical cycles at the ecosystem level. PMID:22143881

Intraspecific variation in fine root respiration and morphology in response to in situ soil nitrogen fertility in a 100-year-old Chamaecyparis obtusa forest.

PubMed

Makita, Naoki; Hirano, Yasuhiro; Sugimoto, Takanobu; Tanikawa, Toko; Ishii, Hiroaki

2015-12-01

Soil N fertility has an effect on belowground C allocation, but the physiological and morphological responses of individual fine root segments to variations in N availability under field conditions are still unclear. In this study, the direction and magnitude of the physiological and morphological function of fine roots in response to variable in situ soil N fertility in a forest site were determined. We measured the specific root respiration (Rr) rate, N concentration and morphology of fine root segments with 1-3 branching orders in a 100-year-old coniferous forest of Chamaecyparis obtusa. Higher soil N fertility induced higher Rr rates, root N concentration, and specific root length (SRL), and lower root tissue density (RTD). In all fertility levels, the Rr rates were significantly correlated positively with root N and SRL and negatively with RTD. The regression slopes of respiration with root N and RTD were significantly higher along the soil N fertility gradient. Although no differences in the slopes of Rr and SRL relationship were found across the levels, there were significant shifts in the intercept along the common slope. These results suggest that a contrasting pattern in intraspecific relationships between specific Rr and N, RTD, and SRL exists among soils with different N fertility. Consequently, substantial increases in soil N fertility would exert positive effects on organ-scale root performance by covarying the Rr, root N, and morphology for their potential nutrient and water uptake.

Impact of a lead mining-smelting complex on the forest-floor litter arthropod fauna in the new lead belt region of southeast Missouri

DOE Office of Scientific and Technical Information (OSTI.GOV)

Watson, A.P.; Van Hook, R.I.; Jackson, D.R.

1976-07-01

Studies of biological activity within the litter horizons of a watershed contaminated by emissions from a lead-ore processing complex focused on the litter-arthropod food chain as a means of detecting perturbations in a heavy-metal contaminated ecosystem. Both point sources (smelter stack emissions) and fugitive sources (ore-handling processes, yard dusts, and exposed concentrate piles) contributed to the Pb, Zn, Cu, and Cd levels in the study area. Arthropod trophic level density, biomass, and heavy metal content were determined by analysis of specimens removed from litter by von Tullgren funnel extraction, taxonomically classified, and segregated into the trophic categories. Changes in littermore » decomposition were reflected in the dynamics of the litter arthropod community. Food-chain dilution of Pb, Zn, Cu, and Cd from litter to litter consumer was occurring, as indicated by the mean concentration factors. Accumulation of Pb by litter consumers was much less than that found for the other three heavy metals. In contrast, predatory arthropods on Crooked Creek Watershed either concentrated or equilibrated with respect to Pb, Zn, and Cd from their prey, as indicated by mean total predator concentration factors. A significant depression of the Ca, Mg, and K content litter occurred relative to the control within 0.8 km of the stack. Two mechanisms were postulated to explain this result: increased leaching of cations through the litter induced by a loss of cation exchange capacity, a decrease in pH, and a decrease in microbial immobilization of macronutrients; and a decreased uptake of macronutrients due to root damage produced by heavy-metal concentrations.« less

Microbial Decomposers Not Constrained by Climate History Along a Mediterranean Climate Gradient

NASA Astrophysics Data System (ADS)

Baker, N. R.; Khalili, B.; Martiny, J. B. H.; Allison, S. D.

2017-12-01

The return of organic carbon to the atmosphere through terrestrial decomposition is mediated through the breakdown of complex organic polymers by extracellular enzymes produced by microbial decomposer communities. Determining if and how these decomposer communities are constrained in their ability to degrade plant litter is necessary for predicting how carbon cycling will be affected by future climate change. To address this question, we deployed fine-pore nylon mesh "microbial cage" litterbags containing grassland litter with and without local inoculum across five sites in southern California, spanning a gradient of 10.3-22.8° C in mean annual temperature and 100-400+ mm mean annual precipitation. Litterbags were deployed in October 2014 and collected four times over the course of 14 months. Recovered litter was assayed for mass loss, litter chemistry, microbial biomass, extracellular enzymes (Vmax and Km­), and enzyme temperature sensitivities. We hypothesized that grassland litter would decompose most rapidly in the grassland site, and that access to local microbial communities would enhance litter decomposition rates and microbial activity in the other sites along the gradient. We determined that temperature and precipitation likely interact to limit microbial decomposition in the extreme sites along our gradient. Despite their unique climate history, grassland microbes were not restricted in their ability to decompose litter under different climate conditions. Although we observed a strong correlation between bacterial biomass and mass loss across the gradient, litter that was inoculated with local microbial communities lost less mass despite having greater bacterial biomass and potentially accumulating more microbial residues. Our results suggest that microbial community composition may not constrain C-cycling rates under climate change in our system. However, there may be community constraints on decomposition if climate change alters litter chemistry, a mechanism only indirectly addressed by our design.

Environmental Controls of Microbial Resource Partitioning in Soils

NASA Astrophysics Data System (ADS)

Kandeler, Ellen; Poll, Christian; Kramer, Susanne; Mueller, Karolin; Marhan, Sven

2015-04-01

The mineralization and flow of plant-derived carbon in soils is relevant to global carbon cycling. Current models of organismic carbon fluxes in soil assume that separate bacterial and fungal energy channels exist in soil. Recent studies disentangle the herbivore and detritivore pathways of microbial resource use, identify the key players contributing to these two different pathways, and determine to what extent microbial substrate use is affected by environmental controls. To follow the kinetics of litter and root decomposition and to quantify the contribution of key players, it is necessary to use isotopic approaches like PLFA-SIP and ergosterol-SIP. It was shown that bacteria and sugar consuming fungi initiated litter decomposition in an incubation experiment during the first two weeks, whereas higher fungi started to grow after the depletion of low molecular weight substrates. Analyses of PLFA-SIP revealed, for example, that fungi assimilated C directly from the litter, whereas bacteria took up substrates in the soil and therefore depended more on external transport processes than fungi. In addition, we will present data from a field experiment showing the incorporation of root and shoot litter C into organic and microbial C pools under field conditions over a period of two years. Similar amounts of C derived from the two resources differing in substrate quality and amount were incorporated into microbial C and ergosterol pools over time, indicating the importance of root-derived C for the soil food web. High incorporation of maize C (up to 76%) into ergosterol suggests fast and high assimilation of maize C into fungal biomass. Nevertheless, there is still a debate whether bacteria, archaea and fungi start feeding on new substrates at the same time or if their activity occurs at different successional stages. This presentation gives a summery of current knowledge on microbial resource partitioning under lab and field conditions.

Spatial patterns of plant litter in a tidal freshwater marsh and implications for marsh persistence.

PubMed

Elmore, Andrew J; Engelhardt, Katharina A M; Cadol, Daniel; Palinkas, Cindy M

2016-04-01

The maintenance of marsh platform elevation under conditions of sea level rise is dependent on mineral sediment supply to marsh surfaces and conversion of above- and belowground plant biomass to soil organic material. These physical and biological processes interact within the tidal zone, resulting in elevation-dependent processes contributing to marsh accretion. Here, we explore spatial pattern in a variable related to aboveground biomass, plant litter, to reveal its role in the maintenance of marsh surfaces. Plant litter persisting through the dormant season represents the more recalcitrant portion of plant biomass, and as such has an extended period of influence on ecosystem processes. We conducted a field and remote sensing analysis of plant litter height, aboveground biomass, vertical cover, and stem density (collectively termed plant litter structure) at a tidal freshwater marsh located within the Potomac River estuary, USA. LiDAR and field observations show that plant litter structure becomes more prominent with increasing elevation. Spatial patterns in litter structure exhibit stability from year to year and correlate with patterns in soil organic matter content, revealed by measuring the loss on ignition of surface sediments. The amount of mineral material embedded within plant litter decreases with increasing elevation, representing an important tradeoff with litter structure. Therefore, at low elevations where litter structure is short and sparse, the role of plant litter is to capture sediment; at high elevations where litter structure is tall and dense, aboveground litter contributes organic matter to soil development. This organic matter contribution has the potential to eclipse that of belowground biomass as the root:shoot ratio of dominant species at high elevations is low compared to that of dominant species at low elevations. Because of these tradeoffs in mineral and organic matter incorporation into soil across elevation gradients, the rate of marsh surface elevation change is remarkably consistent across elevation. Because of the role of plant litter in marsh ecosystem processes, monitoring and assessment of these dynamic geomorphic marsh landscapes might be streamlined through the measurement of plant litter structure, either via LiDAR technologies or field observation.

Acclimation and soil moisture constrain sugar maple root respiration in experimentally warmed soil.

PubMed

Jarvi, Mickey P; Burton, Andrew J

2013-09-01

The response of root respiration to warmer soil can affect ecosystem carbon (C) allocation and the strength of positive feedbacks between climatic warming and soil CO2 efflux. This study sought to determine whether fine-root (<1 mm) respiration in a sugar maple (Acer saccharum Marsh.)-dominated northern hardwood forest would adjust to experimentally warmed soil, reducing C return to the atmosphere at the ecosystem scale to levels lower than that would be expected using an exponential temperature response function. Infrared heating lamps were used to warm the soil (+4 to +5 °C) in a mature sugar maple forest in a fully factorial design, including water additions used to offset the effects of warming-induced dry soil. Fine-root-specific respiration rates, root biomass, root nitrogen (N) concentration, soil temperature and soil moisture were measured from 2009 to 2011, with experimental treatments conducted from late 2010 to 2011. Partial acclimation of fine-root respiration to soil warming occurred, with soil moisture deficit further constraining specific respiration rates in heated plots. Fine-root biomass and N concentration remained unchanged. Over the 2011 growing season, ecosystem root respiration was not significantly greater in warmed soil. This result would not be predicted by models that allow respiration to increase exponentially with temperature and do not directly reduce root respiration in drier soil.

Does species richness affect fine root biomass and production in young forest plantations?

PubMed

Domisch, Timo; Finér, Leena; Dawud, Seid Muhie; Vesterdal, Lars; Raulund-Rasmussen, Karsten

2015-02-01

Tree species diversity has been reported to increase forest ecosystem above-ground biomass and productivity, but little is known about below-ground biomass and production in diverse mixed forests compared to single-species forests. For testing whether species richness increases below-ground biomass and production and thus complementarity between forest tree species in young stands, we determined fine root biomass and production of trees and ground vegetation in two experimental plantations representing gradients in tree species richness. Additionally, we measured tree fine root length and determined species composition from fine root biomass samples with the near-infrared reflectance spectroscopy method. We did not observe higher biomass or production in mixed stands compared to monocultures. Neither did we observe any differences in tree root length or fine root turnover. One reason for this could be that these stands were still young, and canopy closure had not always taken place, i.e. a situation where above- or below-ground competition did not yet exist. Another reason could be that the rooting traits of the tree species did not differ sufficiently to support niche differentiation. Our results suggested that functional group identity (i.e. conifers vs. broadleaved species) can be more important for below-ground biomass and production than the species richness itself, as conifers seemed to be more competitive in colonising the soil volume, compared to broadleaved species.

Effects of elevated CO2 on fine root biomass are reduced by aridity but enhanced by soil nitrogen: A global assessment.

PubMed

Piñeiro, Juan; Ochoa-Hueso, Raúl; Delgado-Baquerizo, Manuel; Dobrick, Silvan; Reich, Peter B; Pendall, Elise; Power, Sally A

2017-11-10

Plant roots play a crucial role in regulating key ecosystem processes such as carbon (C) sequestration and nutrient solubilisation. Elevated (e)CO 2 is expected to alter the biomass of fine, coarse and total roots to meet increased demand for other resources such as water and nitrogen (N), however, the magnitude and direction of observed changes vary considerably between ecosystems. Here, we assessed how climate and soil properties mediate root responses to eCO 2 by comparing 24 field-based CO 2 experiments across the globe including a wide range of ecosystem types. We calculated response ratios (i.e. effect size) and used structural equation modelling (SEM) to achieve a system-level understanding of how aridity, mean annual temperature and total soil nitrogen simultaneously drive the response of total, coarse and fine root biomass to eCO 2 . Models indicated that increasing aridity limits the positive response of fine and total root biomass to eCO 2 , and that fine (but not coarse or total) root responses to eCO 2 are positively related to soil total N. Our results provide evidence that consideration of factors such as aridity and soil N status is crucial for predicting plant and ecosystem-scale responses to future changes in atmospheric CO 2 concentrations, and thus feedbacks to climate change.

Archaea and bacteria mediate the effects of native species root loss on fungi during plant invasion.

PubMed

Mamet, Steven D; Lamb, Eric G; Piper, Candace L; Winsley, Tristrom; Siciliano, Steven D

2017-05-01

Although invasive plants can drive ecosystem change, little is known about the directional nature of belowground interactions between invasive plants, native roots, bacteria, archaea and fungi. We used detailed bioinformatics and a recently developed root assay on soils collected in fescue grassland along a gradient of smooth brome (Bromus inermis Leyss) invasion to examine the links between smooth brome shoot litter and root, archaea, bacteria and fungal communities. We examined (1) aboveground versus belowground influences of smooth brome on soil microbial communities, (2) the importance of direct versus microbe-mediated impacts of plants on soil fungal communities, and (3) the web of roots, shoots, archaea, bacteria and fungi interactions across the A and B soil horizons in invaded and non-invaded sites. Archaea and bacteria influenced fungal composition, but not vice versa, as indicated by redundancy analyses. Co-inertia analyses suggested that bacterial-fungal variance was driven primarily by 12 bacterial operational taxonomic units (OTUs). Brome increased bacterial diversity via smooth brome litter in the A horizon and roots in the B horizon, which then reduced fungal diversity. Archaea increased abundance of several bacterial OTUs, and the key bacterial OTUs mediated changes in the fungi's response to invasion. Overall, native root diversity loss and bacterial mediation were more important drivers of fungal composition than were the direct effects of increases in smooth brome. Critically, native plant species displacement and root loss appeared to be the most important driver of fungal composition during invasion. This causal web likely gives rise to the plant-fungi feedbacks, which are an essential factor determining plant diversity in invaded grassland ecosystems.

Archaea and bacteria mediate the effects of native species root loss on fungi during plant invasion

PubMed Central

Mamet, Steven D; Lamb, Eric G; Piper, Candace L; Winsley, Tristrom; Siciliano, Steven D

2017-01-01

Although invasive plants can drive ecosystem change, little is known about the directional nature of belowground interactions between invasive plants, native roots, bacteria, archaea and fungi. We used detailed bioinformatics and a recently developed root assay on soils collected in fescue grassland along a gradient of smooth brome (Bromus inermis Leyss) invasion to examine the links between smooth brome shoot litter and root, archaea, bacteria and fungal communities. We examined (1) aboveground versus belowground influences of smooth brome on soil microbial communities, (2) the importance of direct versus microbe-mediated impacts of plants on soil fungal communities, and (3) the web of roots, shoots, archaea, bacteria and fungi interactions across the A and B soil horizons in invaded and non-invaded sites. Archaea and bacteria influenced fungal composition, but not vice versa, as indicated by redundancy analyses. Co-inertia analyses suggested that bacterial–fungal variance was driven primarily by 12 bacterial operational taxonomic units (OTUs). Brome increased bacterial diversity via smooth brome litter in the A horizon and roots in the B horizon, which then reduced fungal diversity. Archaea increased abundance of several bacterial OTUs, and the key bacterial OTUs mediated changes in the fungi’s response to invasion. Overall, native root diversity loss and bacterial mediation were more important drivers of fungal composition than were the direct effects of increases in smooth brome. Critically, native plant species displacement and root loss appeared to be the most important driver of fungal composition during invasion. This causal web likely gives rise to the plant–fungi feedbacks, which are an essential factor determining plant diversity in invaded grassland ecosystems. PMID:28140393

Water Uptake along the Length of Grapevine Fine Roots: Developmental anatomy, tissue specific aquaporin expression, and pathways of water transport

USDA-ARS?s Scientific Manuscript database

To better understand water uptake patterns in root systems of woody perennial crops, we detailed the developmental anatomy and hydraulic physiology along the length of grapevine fine roots- from the tip to secondary growth zones. Our characterization included localization of suberized structures an...

SEASONAL PATTERNS OF FINE ROOT PRODUCTION AND TURNOVER IN PONDEROSA PINE STANDS OF DIFFERENT AGES

EPA Science Inventory

Root minirhizotron tubes were installed in two ponderosa pine (Pinus ponderosa Laws.) stands around three different tree age classes (16, 45, and > 250 yr old) to examine root spatial distribution in relation to canopy size and tree distribution, and to determine if rates of fine...

Element Pool Changes within a Scrub-Oak Ecosystem after 11 Years of Exposure to Elevated CO2

PubMed Central

Duval, Benjamin D.; Dijkstra, Paul; Drake, Bert G.; Johnson, Dale W.; Ketterer, Michael E.; Megonigal, J. Patrick; Hungate, Bruce A.

2013-01-01

The effects of elevated CO2 on ecosystem element stocks are equivocal, in part because cumulative effects of CO2 on element pools are difficult to detect. We conducted a complete above and belowground inventory of non-nitrogen macro- and micronutrient stocks in a subtropical woodland exposed to twice-ambient CO2 concentrations for 11 years. We analyzed a suite of nutrient elements and metals important for nutrient cycling in soils to a depth of ∼2 m, in leaves and stems of the dominant oaks, in fine and coarse roots, and in litter. In conjunction with large biomass stimulation, elevated CO2 increased oak stem stocks of Na, Mg, P, K, V, Zn and Mo, and the aboveground pool of K and S. Elevated CO2 increased root pools of most elements, except Zn. CO2-stimulation of plant Ca was larger than the decline in the extractable Ca pool in soils, whereas for other elements, increased plant uptake matched the decline in the extractable pool in soil. We conclude that elevated CO2 caused a net transfer of a subset of nutrients from soil to plants, suggesting that ecosystems with a positive plant growth response under high CO2 will likely cause mobilization of elements from soil pools to plant biomass. PMID:23717607

Selection of root-zone media for higher plant cultivation in space.

PubMed

Guo, Shuang-sheng; Ai, Wei-dang; Zhao, Cheng-jian; Han, Li-jun; Wang, Jian-xiao

2004-04-01

To investigate the cultivating effects of several mineral matters used as root-zone media for higher plant growth in space. Four kinds of artificial and natural mineral matters were used as plant root-zone media based on lots of investigation and analysis. Nutrient liquid was delivered into the media by a long capillary material, and roots of plants obtained nutrition and water from the media. The related parameters such as plant height and photosynthetic efficiency were measured and analyzed. The growing effect in a mixture of coarse and fine ceramic particles with equal quantity proportion was the best, that in fine ceramic particles was the second best, that in clinoptilolite particles was the third and that in diorite particles was the last. The mixture of coarse and fine ceramic particles with equal quantity possesses not only fine capillary action, but also good aerating ability, and therefore is capable of being utilized as an effective root-zone media for higher plants intended to be grown in space.

12 years of irrigation in a drought stressed pine forest speeds up carbon cycling and alters the soil biome but has negligible effects on soil organic matter storage

NASA Astrophysics Data System (ADS)

Hagedorn, Frank; Hartmann, Martin; Brunner, Ivano; Rigling, Andreas; Herzog, Claude; Schaub, Marcus; Frey, Beat

2017-04-01

Inneralpine valleys are experiencing repeated summer droughts, which have caused a die-back of pine forests since the 1990s. Drought limits the metabolic activity and hence C cycling in the plant and soil system. The net effects of drought on soil organic matter (SOM) storage is, however, ambiguous as drought affects both C inputs and outputs. Moreover, in the long-term, water limitation is also altering above- and belowground diversity due to species-dependent resistance and adaptation to drought. In our study, we explored how ten years of irrigation of a water-limited pine forest in the central European Alps altered above- and belowground diversity and C cycling in the plant and soil systems. The decadal long irrigation during summer time strongly increased ecosystem productivity with litter fall and fine root biomass being increased by +50 and +40%, respectively. At the same time, soil CO2 efflux was stimulated by 60%, indicating that the removal of water limitation enhanced both the inputs and outputs of C into soils. The accelerated C cycling was also mirrored by compositional shifts in the soil microbiome. 454-pyrosequencing of ribosomal marker genes indicated that irrigation promoted bacteria and fungi with more copiotrophic life style strategies, that are typical for nutrient-rich conditions associated with a higher decomposition. Determination of SOM pools revealed a C loss in the organic layer under irrigation (-900 gC m-2) but a C gain in the mineral soil (+970 gC m-2), resulting in a negligible net effect. The likely mechanisms for the altered vertical SOM distribution might be (1) an accelerated mineralization of litter in conjunction with higher C inputs from the rhizosphere and/or (2) an increased incorporation of litter in the mineral soil as suggested by a litter bag experiment showing a stimulated activity of the macrofauna with a 5-fold increase of the earthworm density. In summary, our long-term irrigation experiment revealed that the removal of water limitation during summer in a drought-prone pine forest strongly altered C fluxes and the belowground community composition. However, the net effect on SOM stocks was negligible due to a balancing out of C in- and outputs.

Fine root morphological adaptations in Scots pine, Norway spruce and silver birch along a latitudinal gradient in boreal forests.

PubMed

Ostonen, Ivika; Lõhmus, Krista; Helmisaari, Heljä-Sisko; Truu, Jaak; Meel, Signe

2007-11-01

Variability in short root morphology of the three main tree species of Europe's boreal forest (Norway spruce (Picea abies L. Karst.), Scots pine (Pinus sylvestris L.) and silver birch (Betula pendula Roth)) was investigated in four stands along a latitudinal gradient from northern Finland to southern Estonia. Silver birch and Scots pine were present in three stands and Norway spruce was present in all stands. For three fertile Norway spruce stands, fine root biomass and number of root tips per stand area or unit basal area were assessed from north to south. Principal component analysis indicated that short root morphology was significantly affected by tree species and site, which together explained 34.7% of the total variability. The range of variation in mean specific root area (SRA) was 51-74, 60-70 and 84-124 m(2) kg(-1) for Norway spruce, Scots pine and silver birch, respectively, and the corresponding ranges for specific root length were 37-47, 40-48 and 87-97 m g(-1). The range of variation in root tissue density of Norway spruce, Scots pine and silver birch was 113-182, 127-158 and 81-156 kg m(-3), respectively. Sensitivity of short root morphology to site conditions decreased in the order: Norway spruce > silver birch > Scots pine. Short root SRA increased with site fertility in all species. In Norway spruce, fine root biomass and number of root tips per m(2) decreased from north to south. The differences in morphological parameters among sites were significant but smaller than the site differences in fine root biomass and number of root tips.

Relationships between fine root dynamics and nitrogen availability in Michigan northern hardwood forests

Treesearch

A. J. Burton; K. S. Pregitzer; R. L. Hendrick

2000-01-01

Minirhizotrons were used to observe fine root (≤1 mm) production, mortality, and longevity over 2 years in four sugar-maple-dominated northern hardwood forests located along a latitudinal temperature gradient. The sites also differed in N availability, allowing us to assess the relative influences of soil temperature and N availability in controlling fine...

Differences in the sensitivity of fungi and bacteria to season and invertebrates affect leaf litter decomposition in a Mediterranean stream.

PubMed

Mora-Gómez, Juanita; Elosegi, Arturo; Duarte, Sofia; Cássio, Fernanda; Pascoal, Cláudia; Romaní, Anna M

2016-08-01

Microorganisms are key drivers of leaf litter decomposition; however, the mechanisms underlying the dynamics of different microbial groups are poorly understood. We investigated the effects of seasonal variation and invertebrates on fungal and bacterial dynamics, and on leaf litter decomposition. We followed the decomposition of Populus nigra litter in a Mediterranean stream through an annual cycle, using fine and coarse mesh bags. Irrespective of the season, microbial decomposition followed two stages. Initially, bacterial contribution to total microbial biomass was higher compared to later stages, and it was related to disaccharide and lignin degradation; in a later stage, bacteria were less important and were associated with hemicellulose and cellulose degradation, while fungi were related to lignin decomposition. The relevance of microbial groups in decomposition differed among seasons: fungi were more important in spring, whereas in summer, water quality changes seemed to favour bacteria and slowed down lignin and hemicellulose degradation. Invertebrates influenced litter-associated microbial assemblages (especially bacteria), stimulated enzyme efficiencies and reduced fungal biomass. We conclude that bacterial and fungal assemblages play distinctive roles in microbial decomposition and differ in their sensitivity to environmental changes, ultimately affecting litter decomposition, which might be particularly relevant in highly seasonal ecosystems, such as intermittent streams. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Leaf and fine root carbon stocks and turnover are coupled across Arctic ecosystems.

PubMed

Sloan, Victoria L; Fletcher, Benjamin J; Press, Malcolm C; Williams, Mathew; Phoenix, Gareth K

2013-12-01

Estimates of vegetation carbon pools and their turnover rates are central to understanding and modelling ecosystem responses to climate change and their feedbacks to climate. In the Arctic, a region containing globally important stores of soil carbon, and where the most rapid climate change is expected over the coming century, plant communities have on average sixfold more biomass below ground than above ground, but knowledge of the root carbon pool sizes and turnover rates is limited. Here, we show that across eight plant communities, there is a significant positive relationship between leaf and fine root turnover rates (r(2) = 0.68, P < 0.05), and that the turnover rates of both leaf (r(2) = 0.63, P < 0.05) and fine root (r(2) = 0.55, P < 0.05) pools are strongly correlated with leaf area index (LAI, leaf area per unit ground area). This coupling of root and leaf dynamics supports the theory of a whole-plant economics spectrum. We also show that the size of the fine root carbon pool initially increases linearly with increasing LAI, and then levels off at LAI = 1 m(2) m(-2), suggesting a functional balance between investment in leaves and fine roots at the whole community scale. These ecological relationships not only demonstrate close links between above and below-ground plant carbon dynamics but also allow plant carbon pool sizes and their turnover rates to be predicted from the single readily quantifiable (and remotely sensed) parameter of LAI, including the possibility of estimating root data from satellites. © 2013 John Wiley & Sons Ltd.

Influence of invasive earthworm activity on carbon dynamics in soils from the Aspen Free Air CO2 Enrichment Experiment

NASA Astrophysics Data System (ADS)

Filley, T. R.; Top, S. M.; Hopkins, F. M.

2010-12-01

The influence of CO2-driven increase in net primary productivity on soil organic carbon accrual has received considerable emphasis in ecological literature with conclusions varying from positive, to neutral, to negative. What has been understudied is the coupled role of soil fauna, such as earthworms, in controlling the ultimate fate of new above and below ground plant carbon under elevated CO2. Such considerations are particularly relevant considering that in most northern North American forests earthworms are an exotic organism known to cause significant changes to forest floor chemistry and soil structure, possibly increasing nutrient loss from both soil and leaf litter and mixing litter and humus deep into the mineral soil. The impact of these exotic earthworms on overall soil carbon stabilization is largely unknown but likely a function of both species composition and edaphic soil properties. In this paper we present the initial results of a carbon isotope study (13C, 14C) conducted at the Aspen free air CO2 enrichment (FACE) site, Rhinelander, WI, USA to track allocation and redistribution within the soil of plant litter and root carbon (bulk and biopolymer). Along with litter and soil to 25 cm depth, earthworm populations were quantified, and their gut contents collected for isotopic and plant biopolymer chemistry analysis. Contributions of root vs. leaf input to soil and earthworm fecal matter were derived from differences in the chemical and isotope composition of alkaline CuO-derived lignin and substituted fatty acids (SFA) from cutin and suberin. Our investigation demonstrates the presence of invasive European earthworms, of both litter and surface soil dwelling (epigeic) and deep soil dwelling (endogeic) varieties, whose abundance increases under elevated CO2 conditions. Additionally, the different species show selective vertical movement of new and pre-FACE plant biopolymers indicating dynamics in root and leaf decomposition and burial (down to 30 cm) based upon exotic earthworm activity. The isotopic analysis also demonstrates that these invasive ecosystem engineers are bringing up “old” pre-FACE carbon to the surface, diluting the surface soil carbon isotope signature and potentially causing an apparent “slowing” of the rate of accumulation of FACE derived carbon. Our results highlight the complexity of determining soil C dynamics and the important role of invertebrate ecology in this process.

ASSESSING THE EFFECTS OF GLOBAL CLIMATE CHANGE ON THE PRODUCTION AND MORTALITY OF DOUGLAS FIR FINE ROOTS USING MINIRHIZOTRONS

EPA Science Inventory

Fine roots (roots 2 mm in diameter) are one of the principal absorptive surfaces for water and nutrients in terrestrial plants. As such they are vital for plant growth and survival, while their turnover serves as a primary mechanism for carbon addition to soil. Little is known...

Microbial colonization and degradation of polyethylene and biodegradable plastic bags in temperate fine-grained organic-rich marine sediments.

PubMed

Nauendorf, Alice; Krause, Stefan; Bigalke, Nikolaus K; Gorb, Elena V; Gorb, Stanislav N; Haeckel, Matthias; Wahl, Martin; Treude, Tina

2016-02-15

To date, the longevity of plastic litter at the sea floor is poorly constrained. The present study compares colonization and biodegradation of plastic bags by aerobic and anaerobic benthic microbes in temperate fine-grained organic-rich marine sediments. Samples of polyethylene and biodegradable plastic carrier bags were incubated in natural oxic and anoxic sediments from Eckernförde Bay (Western Baltic Sea) for 98 days. Analyses included (1) microbial colonization rates on the bags, (2) examination of the surface structure, wettability, and chemistry, and (3) mass loss of the samples during incubation. On average, biodegradable plastic bags were colonized five times higher by aerobic and eight times higher by anaerobic microbes than polyethylene bags. Both types of bags showed no sign of biodegradation during this study. Therefore, marine sediment in temperate coastal zones may represent a long-term sink for plastic litter and also supposedly compostable material. Copyright © 2016 Elsevier Ltd. All rights reserved.

Biostratinomic processes for the development of mud-cast logs in Carboniferous and Holocene swamps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gastaldo, R.A.; Demko, T.M.; Liu, Yuejin

1989-08-01

Prostrate trees are common features of fossil forest litters, and are frequently preserved as mud-casts. Specimens of Carboniferous mud-cast trees and a mud-filled incipient cast of a Holocene Taxodium have been investigated to determine the biostratinomic processes responsible for their formation. These processes are complex. Hollowing of tree trunks may take place during life or by degradation after death. Once the trunk has fallen, the hollow cavity is supported by surrounding wood and/or bark tissues and acts as a conduit for sediment-laden waters. Leaf litter may be preserved on bedding surfaces. The infilling sequence of horizontal, parallel bedded, fine-grained sedimentmore » is deposited from suspended load during multiple overbank flooding events. These results differ from experimentally produced pith casts in which the sediment grain size is of fine sand. In Holocene specimens, alluvial mud within the log may provide a substrate for infaunal invertebrates. No evidence of infaunal burrowing in Carboniferous analogues exists.« less

The outcome of ecosystem manipulation by elevating atmospheric CO2 is influenced by tree identity and mixture

NASA Astrophysics Data System (ADS)

Godbold, Douglas; Smith, Andrew; Lukac, Martin

2013-04-01

Free Air Carbon dioxide Enrichment (FACE) has often been used predict the response of forest ecosystems to a future high CO2 world. Many of these investigations have been restricted to exposure of single species or genotypes to elevated CO2. To investigate the interaction between tree mixture and elevated CO2, Alnus glutinosa, Betula pendula and Fagus sylvatica were planted in areas of single species and a three species polyculture in a free-air CO2 enrichment study (BangorFACE). The trees were exposed to ambient or elevated CO2 for 4 years. Aboveground woody biomass was increased in polyculture under both ambient and elevated CO2, but the response to elevated CO2 was smaller in polyculture than in the monocultures. In some years, a longer leaf retention was shown under high CO2, and is an indication that environmental factors may moderate tree response to high CO2. Fine and coarse root biomass, together with fine root turnover and fine root morphological characteristics were also measured. Fine root biomass and morphology responded differentially to the elevated CO2 at different soil depths in the three species when grown in monocultures. In polyculture, a greater response to elevated CO2 was observed in coarse roots, and fine root area index. Total fine root biomass was positively affected by elevated CO2 at the end of the experiment, but not by species diversity. Our results show that the aboveground and belowground response to elevated CO2 is significantly affected by intra- and inter-specific competition, and that elevated CO2 response may be reduced in forest communities comprised of tree species with contrasting functional traits but also that other environmental factors may induce previously unseen effects.

Transformations of DOM in forested catchments: the pathways of DOM from litter and soil to river export

NASA Astrophysics Data System (ADS)

Lajtha, K.; Yano, Y.; Crow, S.; Kaushal, S.

2006-12-01

Although the quality and quantity of DOM ultimately derives from plant detritus and soils in watersheds, three is substantial alteration of DOM as it passes from litter through the terrestrial landscape. As DOM is generated from plant and microbial detritus and processing, different fractions may be lost via respiration, form quasi-stable soil organic matter, or be temporarily sorbed to soil minerals. We followed the fate of DOC and DON from forested plots with experimentally altered detritus loads to determine the relative roles of original plant litter chemistry and soil transformations. Our study site was the DIRT (Detrital Input and Removal Treatment) plots at the H.J. Andrews Experimental Forest in Oregon, where treatments include detrital additions (wood vs. needle litter), litter exclusion, and root exclusions. Fractionation of detritus leachate solutions demonstrated significant differences in DOC chemistry from different detrital sources. Root leachates produced high quantities of hydrophilic neutral DOC, a fraction rich in labile sugars and polysaccharides; young wood extracts produced higher quantities of weak hydrophobic acids and hydrophobic neutrals (longer chain hydrocarbons); older wood had lower quantities of most labile constituents but was rich in strong hydrophobic acids. Although laboratory extracts of different litter types showed differences in DOM chemistry, soil solutions collected just below the forest floor from the differing detrital treatments were remarkably uniform and poor in labile constituents, suggesting microbial equalization of DOM leachate in the field. DOM quality and concentrations changed significantly with passage through soil profiles. DOC concentrations decreased through the soil profile in all plots to a greater degree than did dissolved organic nitrogen (DON), most likely due to preferential sorption of high C:N hydrophobic dissolved organic matter (DOM) in upper horizons. Percent hydrophobic DOM decreased significantly with depth, and the remaining hydrophilic DOM had a much lower and narrower C:N ratio than hydrophobic DOM. We also hypothesize that protein-reactive polyphenols, or tannins, may contribute to the decreased lability of N-rich DOM in soil solutions and thus significantly influence the quality of DOM delivered to streams.

Species-specific responses to atmospheric carbon dioxide and tropospheric ozone mediate changes in soil carbon.

PubMed

Talhelm, Alan F; Pregitzer, Kurt S; Zak, Donald R

2009-11-01

We repeatedly sampled the surface mineral soil (0-20 cm depth) in three northern temperate forest communities over an 11-year experimental fumigation to understand the effects of elevated carbon dioxide (CO(2)) and/or elevated phyto-toxic ozone (O(3)) on soil carbon (C). After 11 years, there was no significant main effect of CO(2) or O(3) on soil C. However, within the community containing only aspen (Populus tremuloides Michx.), elevated CO(2) caused a significant decrease in soil C content. Together with the observations of increased litter inputs, this result strongly suggests accelerated decomposition under elevated CO(2.) In addition, an initial reduction in the formation of new (fumigation-derived) soil C by O(3) under elevated CO(2) proved to be only a temporary effect, mirroring trends in fine root biomass. Our results contradict predictions of increased soil C under elevated CO(2) and decreased soil C under elevated O(3) and should be considered in models simulating the effects of Earth's altered atmosphere.

Emission of Carbon Dioxide Influenced by Different Water Levels from Soil Incubated Organic Residues

PubMed Central

Hossain, M. B.; Puteh, A. B.

2013-01-01

We studied the influence of different organic residues and water levels on decomposition rate and carbon sequestration in soil. Organic residues (rice straw, rice root, cow dung, and poultry litter) including control were tested under moistened and flooding systems. An experiment was laid out as a complete randomized design at 25°C for 120 days. Higher CO2-C (265.45 mg) emission was observed in moistened condition than in flooding condition from 7 to 120 days. Among the organic residues, poultry litter produced the highest CO2-C emission. Poultry litter with soil mixture increased 121% cumulative CO2-C compared to control. On average, about 38% of added poultry litter C was mineralized to CO2-C. Maximum CO2-C was found in 7 days after incubation and thereafter CO2-C emission was decreased with the increase of time. Control produced the lowest CO2-C (158.23 mg). Poultry litter produced maximum cumulative CO2-C (349.91 mg). Maximum organic carbon was obtained in cow dung which followed by other organic residues. Organic residues along with flooding condition decreased cumulative CO2-C, k value and increased organic C in soil. Maximum k value was found in poultry litter and control. Incorpored rice straw increased organic carbon and decreased k value (0.003 g d−1) in soil. In conclusion, rice straw and poultry litter were suitable for improving soil carbon. PMID:24163626

Allelopathic Effects, Physiological Responses and Phenolic Compounds in Litter Extracts of Juniperus rigidaSieb. et Zucc.

PubMed

Liu, Jing; Li, Dengwu; Wang, Dongmei; Liu, Yu; Song, Huiying

2017-08-01

The allelopathic effects of Juniperus rigida litter aqueous extract (LE) on wheat and Pinus tabuliformis were studied, as well as the physiological responses to the extract. High concentration LE (0.10 g Dw/ml) significantly inhibited the seed germination and seedling growth in receptor plants. The chlorophyll content and root activity in the wheat seedlings were reduced significantly across all treatments; however, those were more prominently reduced at high concentration (0.10 g Dw/ml) but received little stimulation at low concentration (0.025 g Dw/ml) in P. tabuliformis. The content of malonaldehyde (MDA) increased with increasing concentrations of LE, except at 0.025 g Dw/ml. Activities of antioxidant enzymes (POD, CAT and SOD) in receptor plants were all significantly inhibited at high concentrations but stimulated at low concentrations. These results demonstrate that the aqueous extract from J. rigida litter has allelopathic potential. Various phenolic compounds were identified in litter aqueous extract and litter ethanol extract by HPLC. The phenolic compound content in the aqueous extract was significantly lower than that in the ethanol extract. Chlorogenic acid and podophyllotoxin were the predominant phenolic compounds in both types of litter extracts. These findings suggest that the seed germination and seedling growth of P. tabuliformis and wheat would be inhibited when planted near large amounts J. rigida litter. © 2017 Wiley-VHCA AG, Zurich, Switzerland.

Fine and coarse root parameters from mature black spruce displaying genetic x soil moisture interaction in growth

Treesearch

John E. Major; Kurt H. Johnsen; Debby C. Barsi; Moira Campbell

2012-01-01

Fine and coarse root biomass, C, and N mass parameters were assessed by root size and soil depths from soil cores in plots of 32-year-old black spruce (Picea mariana (Mill.) Britton, Sterns & Poggenb.) from four full-sib families studied previously for drought tolerance and differential productivity on a dry and wet...

Regional scale patterns of fine root lifespan and turnover under current and future climate

Treesearch

M. Luke McCormack; David M. Eissenstat; Anantha M. Prasad; Erica A. Smithwick

2013-01-01

Fine root dynamics control a dominant flux of carbon from plants and into soils and mediate potential uptake and cycling of nutrients and water in terrestrial ecosystems. Understanding of these patterns is needed to accurately describe critical processes like productivity and carbon storage from ecosystem to global scales. However, limited observations of root dynamics...

Effects of spatiotemporal variation of soil salinity on fine root distribution in different plant configuration modes in new reclamation coastal saline field.

PubMed

Jiang, Hong; Du, Hongyu; Bai, Yingying; Hu, Yue; Rao, Yingfu; Chen, Chong; Cai, Yongli

2016-04-01

In order to study the effects of salinity on plant fine roots, we considered three different plant configuration modes (tree stand model (TSM), shrub stand model (SSM), and tree-shrub stand model (TSSM)). Soil samples were collected with the method of soil drilling. Significant differences of electrical conductivity (EC) in the soil depth of 0-60 cm were observed among the three modes (p < 0.05). In the above three modes, the variation of soil salinity among various soil layers and monthly variation of soil salinity were the highest in SSM and reached 2.30 and 2.23 mS/cm (EC1:5), respectively. Due to the effect of salinity, fine root biomass (FRB) showed significant differences in different soil depths (p < 0.05). More than 60% of FRB was concentrated in the soil depth above 30 cm. FRB showed exponential decline with soil depth (p < 0.05). FRB showed spatial heterogeneity in the 40-cm soil depth. In the above three modes, compared with FRB, specific root length (SRL) and fine root length density (FRLD) showed the similar changing trend. Fine roots showed significant seasonal differences among different modes (p < 0.05). FRB showed the bimodal variation and was the highest in July. However, we found that the high content of salts had obvious inhibitory effect on the distribution of FRB. Therefore, the salinity should be below 1.5 mS/cm, which was suitable for the growth of plant roots. Among the three modes, TSSM had the highest FRB, SRL, and FRLD and no obvious soil salt accumulation was observed. The results indicated that fine root biomass was affected by high salt and that TSSM had the strong effects of salt suppression and control. In our study, TSSM may be the optimal configuration mode for salt suppression and control in saline soil.

Characterization of forest litter horizons through full-wave inversion of ground-penetrating radar data

NASA Astrophysics Data System (ADS)

André, Frédéric; Jonard, Mathieu; Jonard, François; Lambot, Sébastien

2015-04-01

Decomposing litter accumulated at the soil surface in forest ecosystems play a major role in a series of ecosystem processes (soil carbon sequestration, nutrient release through decomposition, water retention, buffering of soil temperature variations, tree regeneration, population dynamics of ground vegetation and soil fauna, ...). Besides, the presence of litter is acknowledged to influence remote sensing radar data over forested areas and accurate quantification of litter radiative properties is essential for proper processing of these data. In these respects, ground-penetrating radar (GPR) presents particular interests, potentially allowing for fast and non-invasive characterization of organic layers with fine spatial and/or temporal resolutions as well as for providing detailed information on litter electrical properties which are required for modeling either active or passive microwave remote sensing data. We designed an experiment in order to analyze the backscattering from forest litter horizons and to investigate the potentialities of GPR for retrieving the physical properties of these horizons. For that purpose, we used an ultrawide band radar system connected to a transmitting and receiving horn antenna. The GPR data were processed resorting to full-wave inversion of the signal, through which antenna effects are accounted for. In a first step, GPR data were acquired over artificially reconstructed layers of three different beech litter types (i.e., (i) recently fallen litter with easily discernible plant organs (OL layer), (ii) fragmented litter in partial decomposition without entire plant organs (OF layer) and (iii) combination of OL and OF litter layers) and considering in each case a range of layer thicknesses. In a second step, so as to validate the adopted methodology in real natural conditions, GPR measurements were performed in situ along a transect crossing a wide range of litter properties in terms of thickness and composition through stands of various tree species. Results from the controlled experiment demonstrated the ability of GPR to reconstruct litter horizons, showing close correspondence between inversely estimated and measured litter layer thicknesses and providing reliable estimates of litter electromagnetic properties. This experiment also highlighted the necessity of considering scattering and dielectric losses occurring within litter for proper modeling of the GPR signal, which was accounted for through frequency dependence of an effective electrical conductivity of the litter. Similar findings emerged from the in situ experiment, though somewhat lower agreement was observed between estimated and reference layer thickness values. These results show great promise for the use of GPR for non-invasive characterization of forest litter. Index Terms: Ground-penetrating radar (GPR), forest litter, frequency dependence, scattering Reference: André F., Jonard M., Lambot S., 2015. Non-invasive forest litter characterization using full-wave inversion of microwave radar data, IEEE Transactions on Geoscience and Remote Sensing, 53(2), 828-840.

ARBUSCULAR MYCORRHIZAL COLONIZATION OF LARREA TRIDENTATA AND AMBROSIA DUMOSA ROOTS VARIES WITH PRECIPITATION AND SEASON IN THE MOJAVE DESERT

DOE Office of Scientific and Technical Information (OSTI.GOV)

M. E. APPLE; C. I. THEE; V. L. SMITH-LONGOZO

2004-01-01

The percentage of fine roots colonized by arbuscular mycorrhizal (AM) fungi varied with season and with species in the co-dominant shrubs Lurreu tridentutu and Ambrosia dumosu at a site adjacent to the Nevada Desert FACE (Free-Air CO{sub 2} Enrichment) Facility (NDFF) in the Mojave Desert. We excavated downward and outward from the shrub bases in both species to collect and examine fine roots (< 1.0 mm diameter) at monthly intervals throughout 2001 and from October 2002 to September 2003. Fungal structures became visible in cleared roots stained with trypan blue. We quantified the percent colonization of roots by AM fungimore » via the line intercept method. In both years and for both species, colonization was highest in fall, relatively low in spring when root growth began, increased in late spring, and decreased during summer drought periods. Increases in colonization during summer and fall reflect corresponding increases in precipitation. Spring mycorrhizal colonization is low despite peaks in soil water availability and precipitation, indicating that precipitation is not the only factor influencing mycorrhizal colonization. Because the spring decrease in mycorrhizal colonization occurs when these shrubs initiate a major flush of fine root growth, other phenological events such as competing demands for carbon by fine root initiation, early season shoot growth, and flowering may reduce carbon availability to the fungus, and hence decrease colonization. Another possibility is that root growth exceeds the rate of mycorrhizal colonization.« less

Soil Organic Matter Responses to Chronic Nitrogen Additions in a Temperate Forest (Invited)

NASA Astrophysics Data System (ADS)

Frey, S. D.; Nadelhoffer, K.; Bowden, R.; Brzostek, E. R.; Caldwell, B. A.; Crow, S. E.; Finzi, A. C.; Goodale, C. L.; Grandy, S.; Lajtha, K.; Ollinger, S. V.; Plante, A. F.

2010-12-01

The Chronic Nitrogen Addition Experiment at Harvard Forest in central Massacusetts, USA was established in 1988 to investigate the effects of increasing anthropogenic atmospheric N deposition on forests in the eastern United States. Located in an old red pine plantation and a mixed hardwood forest, the treated plots have received 50 and 150 kg N/ha/yr, as ammonium sulfate, in six equal monthly applications during the growing season each year since the start of the experiment. Additionally, the control and low N treatments were given a single pulse label of 15N-nitrate or 15N-ammonium in 1991 and 1992. Regular measurements have been made over the past 20 years to assess woody biomass production and mortality, foliar chemistry, litter fall, and soil N dynamics. Less frequent measurements of soil C pools, soil respiration, fine root dynamics, and microbial biomass and community structure have been made. For the 20th anniversary, an intensive sampling campaign was carried out in fall 2008 with a focus on evaluating how the long-term N additions have impacted ecosystem C storage and N dynamics. Our primary objective was to assess the amount of C and N stored in wood, foliage, litter, roots, and soil (to a depth of ~50 cm). We also wanted to examine the fate of N by comparing patterns of 15N recovery to those observed previously. An additional objective was to further examine how chronic N additions impact microbial biomass, activity and community structure. Results indicate that chronic N additions over the past 20 years have increased forest floor mass and soil organic matter across the soil profile; decreased microbial biomass, especially the fungal component; and altered microbial community composition (i.e., significantly lower fungal:bacterial biomass ratios in the N amended plots). N15 tracer recoveries in soils and forest floors were much higher than in tree biomass, ranging from 49 to 101% of additions across forest types and N addition rates. Stoichiometric analyses of these recoveries suggest that N additions are contributing to soil C accumulation to a greater extent than to biomass accumulation in these forests.

Experimentally simulated global warming and nitrogen enrichment effects on microbial litter decomposers in a marsh.

PubMed

Flury, Sabine; Gessner, Mark O

2011-02-01

Atmospheric warming and increased nitrogen deposition can lead to changes of microbial communities with possible consequences for biogeochemical processes. We used an enclosure facility in a freshwater marsh to assess the effects on microbes associated with decomposing plant litter under conditions of simulated climate warming and pulsed nitrogen supply. Standard batches of litter were placed in coarse-mesh and fine-mesh bags and submerged in a series of heated, nitrogen-enriched, and control enclosures. They were retrieved later and analyzed for a range of microbial parameters. Fingerprinting profiles obtained by denaturing gradient gel electrophoresis (DGGE) indicated that simulated global warming induced a shift in bacterial community structure. In addition, warming reduced fungal biomass, whereas bacterial biomass was unaffected. The mesh size of the litter bags and sampling date also had an influence on bacterial community structure, with the apparent number of dominant genotypes increasing from spring to summer. Microbial respiration was unaffected by any treatment, and nitrogen enrichment had no clear effect on any of the microbial parameters considered. Overall, these results suggest that microbes associated with decomposing plant litter in nutrient-rich freshwater marshes are resistant to extra nitrogen supplies but are likely to respond to temperature increases projected for this century.

Sorption of polyphenolics (tannins) to natural soils

USDA-ARS?s Scientific Manuscript database

Tannins enter soil systems via rainfall through the leaf canopy, leaf litter decomposition, and root exudation and decomposition. For tannins released into soils, the relative importance of sorption to soil; chemical reactions with soil minerals; and biological decomposition is unknown. Determinin...

Root structure-function relationships in 74 species: evidence of a root economics spectrum related to carbon economy.

PubMed

Roumet, Catherine; Birouste, Marine; Picon-Cochard, Catherine; Ghestem, Murielle; Osman, Normaniza; Vrignon-Brenas, Sylvain; Cao, Kun-Fang; Stokes, Alexia

2016-05-01

Although fine roots are important components of the global carbon cycle, there is limited understanding of root structure-function relationships among species. We determined whether root respiration rate and decomposability, two key processes driving carbon cycling but always studied separately, varied with root morphological and chemical traits, in a coordinated way that would demonstrate the existence of a root economics spectrum (RES). Twelve traits were measured on fine roots (diameter ≤ 2 mm) of 74 species (31 graminoids and 43 herbaceous and dwarf shrub eudicots) collected in three biomes. The findings of this study support the existence of a RES representing an axis of trait variation in which root respiration was positively correlated to nitrogen concentration and specific root length and negatively correlated to the root dry matter content, lignin : nitrogen ratio and the remaining mass after decomposition. This pattern of traits was highly consistent within graminoids but less consistent within eudicots, as a result of an uncoupling between decomposability and morphology, and of heterogeneity of individual roots of eudicots within the fine-root pool. The positive relationship found between root respiration and decomposability is essential for a better understanding of vegetation-soil feedbacks and for improving terrestrial biosphere models predicting the consequences of plant community changes for carbon cycling. © 2016 CNRS. New Phytologist © 2016 New Phytologist Trust.

Who's on first? Part I: Influence of plant growth on C association with fresh soil minerals

NASA Astrophysics Data System (ADS)

Neurath, R.; Whitman, T.; Nico, P. S.; Pett-Ridge, J.; Firestone, M. K.

2015-12-01

Mineral surfaces provide sites for carbon stabilization in soils, protecting soil organic matter (SOM) from microbial degradation. SOM distributed across mineral surfaces is expected to be patchy and certain minerals undergo re-mineralization under dynamic soil conditions, such that soil minerals surfaces can range from fresh to thickly-coated with SOM. Our research investigates the intersection of microbiology and geochemistry, and aims to build a mechanistic understanding of plant-derived carbon (C) association with mineral surfaces and the factors that determine SOM fate in soil. Plants are the primary source of C in soil, with roots exuding low-molecular weight compounds during growth and contributing more complex litter compounds at senescence. We grew the annual grass, Avena barbata, (wild oat) in a 99 atom% 13CO2 atmosphere in soil microcosms incubated with three mineral types representing a spectrum of reactivity and surface area: quartz, kaolinite, and ferrihydrite. These minerals, isolated in mesh bags to exclude roots but not microorganisms, were extracted and analyzed for total C and 13C at multiple plant growth stages. At plant senescence, the quartz had the least mineral-bound C (0.40 mg-g-1) and ferrihydrite the most (0.78 mg-g-1). Ferrihydrite and kaolinite also accumulated more plant-derived C (3.0 and 3.1% 13C, respectively). The experiment was repeated with partially digested 13C-labled root litter to simulate litter decomposition during plant senescence. Thus, we are able evaluate contributions derived from living and dead root materials on soil minerals using FTIR and 13C-NMR. We find that mineral-associated C bears a distinct microbial signature, with soil microbes not only transforming SOM prior to mineral association, but also populating mineral surfaces over time. Our research shows that both soil mineralogy and the chemical character of plant-derived compounds are important controls of mineral protection of SOM.

Altered Plant Litter and Microbial Composition Lead to Topsoil Organic Carbon Loss Over a Shrub-encroachment Gradient in an Inner Mongolia Grassland

NASA Astrophysics Data System (ADS)

Zhou, L.; Li, H.; Shen, H.; Xu, Y.; Wang, Y.; Xing, A.; Fang, J.

2017-12-01

Over the past 150 years, shrub encroachment has occurred in arid and semi-arid ecosystems resulting from climate change and increased human disturbance. Previous studies have revealed that shrub encroachment has substantial effects on habitat heterogeneity, aboveground biomass and bulk carbon content of grasslands, thereby affecting the regional carbon balance. Soil organic carbon (SOC) is mainly derived from aboveground litter, root litter and root exudates and is metabolized by microorganisms. The quality and quantity of plant litter together with soil microbial biomass are important drivers of SOC accumulation. However, the mechanisms regulating soil carbon accumulation by the shrub encroachment remain unclear and molecular evidence is particularly lacking. We use the data of the chemical composition of plant tissues and SOC, and the soil microbial communities to identify the effects of shrub encroachment on SOC accumulation in the top layer along a gradient of natural shrub cover in the grasslands of Inner Mongolia. Our finding indicates that nitrogen-rich legume-shrub encroachment led to soil carbon accumulation in the shrub patch, with more extensive carbon loss observed in the grassy matrix, which resulted in an overall carbon loss. In the pure grassland, a higher abundance of cutin and suberin and a lower concentration of free lipids were detected, suggesting the preservation of recalcitrant polymers derived from herb inputs. In the shrub-encroached grasslands, the labile shrub leaves did not decompose alone but were mixed with herb litter to promote the degradation of SOC via the priming of microbial activities. The SOC remained unchanged in the shrub patches with the increasing shrub cover, which might have been caused by the replacement of prior carbon decompositions with the fresh input of shrub leaves. Similarly, the SOC decreased significantly with increasing shrub cover in the grassy matrix, which likely resulted from insufficient fresh plant inputs compared with the prior carbon decompositions.

Using an input manipulation experiment to partition greenhouse gas fluxes from a commercial Miscanthus plantation in the UK

NASA Astrophysics Data System (ADS)

Robertson, Andy; Davies, Christian; Smith, Pete; McNamara, Niall

2014-05-01

Miscanthus is a lignocellulosic C4 crop that can be grown for a number of practical end-uses but recently interest has increased in its viability as a bioenergy crop; both providing a renewable source of energy and helping to limit climate change by reducing carbon (C) emissions associated with energy generation. Recent studies have shown that Miscanthus plantations may increase stocks of soil organic carbon (SOC) however there is still considerable uncertainty surrounding estimates of net C exchange and the best management practices to achieve the best greenhouse gas (GHG) mitigation potential. Using an input manipulation experiment, we monitored emissions of N2O, CH4 and CO2 from living Miscanthus roots, aboveground plant litter and soil individually to quantify and partition these emissions and better understand the influence of abiotic factors on SOC and GHG dynamics under Miscanthus. In January 2009 twenty-five 2 m2 plots were set up in a three-year old 11 hectare commercial Miscanthus plantation in Lincolnshire, UK; with five replicates of five treatments. These treatments varied plant input (roots or senesced aboveground plant litter) to the soil by way of controlled exclusion techniques. The delta 13C value of soil C and CO2 emitted from each treatment was measured monthly between March 2009 and March 2013. Measurements of CH4 and N2O emissions were also taken at the soil surface from each treatment. Miscanthus-derived emissions were determined using the isotopic discrimination between C4 plant matter and C3 soil, and the treatments were compared to assess their effects on C inputs and outputs to the soil. Both CH4 and N2O emissions were below detection limits, mainly due to a lack of fertiliser additions and limited disturbance of the agricultural site. However, results for CO2 emissions indicate a strong seasonal variation; litter decomposition forms a large portion of the CO2 emissions in winter and spring whereas root respiration dominates the summer and autumn fluxes. After four years of aboveground plant litter removal there was no significant change in total soil C stocks indicating that earlier harvests and more thorough litter removal from the site would have little impact on C inputs to the soil. Outside the input manipulation treatments we also compared the top 30cm of soil from beneath the Miscanthus plantation with that below an adjacent arable field cropped with a winter wheat and oil seed rape rotation (the prior land use of the Miscanthus site). Results showed a greater soil C stock in the Miscanthus soils, although the difference was not statistically significant after 7 years of growth. Additionally, physiochemical soil fractionation of the top 30cm of soils below the input manipulation treatments indicates that soil fractions describing particulate organic matter, sand and soil aggregates all contain significantly more Miscanthus C in the top 15cm than in the 15-30cm layer, and when both roots and aboveground plant litter are present.

[Effects of neighbor competition on growth, fine root morphology and distribution of Schima superba and Cunninghamia lanceolata in different nutrient environments].

PubMed

Yao, Jia Bao; Chu, Xiu Li; Zhou, Zhi Chun; Tong, Jian She; Wang, Hui; Yu, Jia Zhong

2017-05-18

Taking Schima superba and Cunninghamia lanceolata as test materials, a pot experiment was conducted to simulate the heterogeneous and homogeneous forest soil nutrient environments, and design three planting modes including single plant, two-strain pure plant and two-strain mixed ones to reason the promotion in mixed S. superba and C. lanceolata plantation and the competitive advantage of S. superba. Results showed that compared with the homogeneous nutrient environment, both S. superba and C. lanceolata had the higher seedling height and dry matter accumulation, when mixed in the heterogeneous nutrient environment, S. superba displayed the obviously competitive advantage, which related to its root plasticity. The fine root of S. superba mixed in each diameter class showed a lot of hyperplasia, and the root total length, surface area and volume of which were 80%-180% higher than that of C. lanceolata. S. superba took the advantage of the compensatory growth strategy of vertical direction in fine roots, namely, they still multiplied to gain greater competitive advantage in low nutrient patches, besides occupying eutrophic surface. The different soil colonization and niche differentiation in fine root of S. superba and C. lanceolata alleviated the strong competition for nutrients of the roots of the two species, and improved the mixed-plantation production. Pure plantation of S. superba harvested the lower yield, which due to the root self-recognition inhibited the growth of root system. Fine roots staggered and evenly distributed on the space might be a reason for stable structure of pure S. superba plantation. So, it was recommended that block surface layer soil preparation and fertilization are used to improve the soil nutrient distribution, and the mixed plantation is constructed to promote the growth of S. superba and C. lanceolata, at the same time, the stand density is regulated to promote tree growth for the pure artificial S. superba plantation which had already been built.

Hydraulic properties and fine root mass of Larix sibirica along forest edge-interior gradients

NASA Astrophysics Data System (ADS)

Chenlemuge, Tselmeg; Dulamsuren, Choimaa; Hertel, Dietrich; Schuldt, Bernhard; Leuschner, Christoph; Hauck, Markus

2015-02-01

At its southernmost distribution limit in Inner Asia, the boreal forest disintegrates into forest fragments on moist sites (e.g. north-facing slopes), which are embedded in grasslands. This landscape mosaic is characterized by a much higher forest edge-to-interior ratio than in closed boreal forests. Earlier work in the forest-steppe ecotone of Mongolia has shown that Larix sibirica trees at forest edges grow faster than in the forest interior, as the more xeric environment at the edge promotes self-thinning and edges are preferentially targeted by selective logging and livestock grazing. Lowered stand density reduces competition for water in these semi-arid forests, where productivity is usually limited by summer drought. We studied how branch and coarse root hydraulic architecture and xylem conductivity, fine root biomass and necromass, and fine root morphology of L. sibirica respond to sites differing in water availability. Studying forest edge-interior gradients in two regions of western Mongolia, we found a significant reduction of branch theoretical (Kp) and empirical conductivity (Ks) in the putatively more drought-affected forest interior in the Mongolian Altai (mean precipitation: 120 mm yr-1), while no branch xylem modification occurred in the moister Khangai Mountains (215 mm yr-1). Kp and Ks were several times larger in roots than in branches, but root hydraulics were not influenced by stand density or mean annual precipitation. Very low fine root biomass: necromass ratios at all sites, and in the forest interior in particular, suggest that L. sibirica seeks to maintain a relatively high root conductivity by producing large conduits, which results in high root mortality due to embolism during drought. Our results suggest that L. sibirica is adapted to the semi-arid climate at its southernmost distribution limit by considerable plasticity of the branch hydraulic system and a small but apparently dynamic fine root system.

Nitrogen dynamics in an Alaskan salt marsh following spring use by geese

USGS Publications Warehouse

Zacheis, Amy B.; Ruess, Roger W.; Hupp, Jerry W.

2002-01-01

Lesser snow geese (Anser caerulescens caerulescens) and Canada geese (Branta canadensis) use several salt marshes in Cook Inlet, Alaska, as stopover areas for brief periods during spring migration. We investigated the effects of geese on nitrogen cycling processes in Susitna Flats, one of the marshes. We compared net nitrogen mineralization, organic nitrogen pools and production in buried bags, nitrogen fixation by cyanobacteria, and soil and litter characteristics on grazed plots versus paired plots that had been exclosed from grazing for 3 years. Grazed areas had higher rates of net nitrogen mineralization in the spring and there was no effect of grazing on organic nitrogen availability. The increased mineralization rates in grazed plots could not be accounted for by alteration of litter quality, litter quantity, microclimate, or root biomass, which were not different between grazed and exclosed plots. In addition, fecal input was very slight in the year that we studied nitrogen cycling. We propose that trampling had two effects that could account for greater nitrogen availability in grazed areas: litter incorporation into soil, resulting in increased rates of decomposition and mineralization of litter material, and greater rates of nitrogen fixation by cyanobacteria on bare, trampled soils. A path analysis indicated that litter incorporation by trampling played a primary role in the nitrogen dynamics of the system, with nitrogen fixation secondary, and that fecal input was of little importance.

Biological decomposition efficiency in different woodland soils.

PubMed

Herlitzius, H

1983-03-01

The decomposition (meaning disappearance) of different leaf types and artificial leaves made from cellulose hydrate foil was studied in three forests - an alluvial forest (Ulmetum), a beech forest on limestone soil (Melico-Fagetum), and a spruce forest in soil overlying limestone bedrock.Fine, medium, and coarse mesh litter bags of special design were used to investigate the roles of abiotic factors, microorganisms, and meso- and macrofauna in effecting decomposition in the three habitats. Additionally, the experimental design was carefully arranged so as to provide information about the effects on decomposition processes of the duration of exposure and the date or moment of exposure. 1. Exposure of litter samples oor 12 months showed: a) Litter enclosed in fine mesh bags decomposed to some 40-44% of the initial amount placed in each of the three forests. Most of this decomposition can be attributed to abiotic factors and microoganisms. b) Litter placed in medium mesh litter bags reduced by ca. 60% in alluvial forest, ca. 50% in beech forest and ca. 44% in spruce forest. c) Litter enclosed in coarse mesh litter bags was reduced by 71% of the initial weights exposed in alluvial and beech forests; in the spruce forest decomposition was no greater than observed with fine and medium mesh litter bags. Clearly, in spruce forest the macrofauna has little or no part to play in effecting decomposition. 2. Sequential month by month exposure of hazel leaves and cellulose hydrate foil in coarse mesh litter bags in all three forests showed that one month of exposure led to only slight material losses, they did occur smallest between March and May, and largest between June and October/November. 3. Coarse mesh litter bags containing either hazel or artificial leaves of cellulose hydrate foil were exposed to natural decomposition processes in December 1977 and subsampled monthly over a period of one year, this series constituted the From-sequence of experiments. Each of the From-sequence samples removed was immediately replaced by a fresh litter bag which was left in place until December 1978, this series constituted the To-sequence of experiments. The results arising from the designated From- and To-sequences showed: a) During the course of one year hazel leaves decomposed completely in alluvial forest, almost completely in beech forest but to only 50% of the initial value in spruce forest. b) Duration of exposure and not the date of exposure is the major controlling influence on decomposition in alluvial forest, a characteristic reflected in the mirror-image courses of the From- and To-sequences curves with respect to the abscissa or time axis. Conversely the date of exposure and not the duration of exposure is the major controlling influence on decomposition in the spruce forest, a characteristic reflected in the mirror-image courses of the From-and To-sequences with respect to the ordinate or axis of percentage decomposition. c) Leaf powder amendment increased the decomposition rate of the hazel and cellulose hydrate leaves in the spruce forest but had no significant effect on their decomposition rate in alluvial and beech forests. It is concluded from this, and other evidence, that litter amendment by leaf fragments of phytophage frass in sites of low biological decomposition activity (eg. spruce) enhances decomposition processes. d) The time course of hazel leaf decomposition in both alluvial and beech forest is sigmoidal. Three s-phases are distinguished and correspond to the activity of microflora/microfauna, mesofauna/macrofauna, and then microflora/microfauna again. In general, the sigmoidal pattern of the curve can be considered valid for all decomposition processes occurring in terrestrial situations. It is contended that no decomposition (=disappearance) curve actually follows an e-type exponential function. A logarithmic linear regression can be constructed from the sigmoid curve data and although this facilitates inter-system comparisons it does not clearly express the dynamics of decomposition. 4. The course of the curve constructed from information about the standard deviations of means derived from the From- and To-sequence data does reflect the dynamics of litter decomposition. The three s-phases can be recognised and by comparing the actual From-sequence deviation curve with a mirror inversion representation of the To-sequence curve it is possible to determine whether decomposition is primarily controlled by the duration of exposure or the date of exposure. As is the case for hazel leaf decomposition in beech forest intermediate conditions can be readily recognised.

Applicability of optical scanner method for fine root dynamics

NASA Astrophysics Data System (ADS)

Kume, Tomonori; Ohashi, Mizue; Makita, Naoki; Khoon Kho, Lip; Katayama, Ayumi; Matsumoto, Kazuho; Ikeno, Hidetoshi

2016-04-01

Fine root dynamics is one of the important components in forest carbon cycling, as ~60 % of tree photosynthetic production can be allocated to root growth and metabolic activities. Various techniques have been developed for monitoring fine root biomass, production, mortality in order to understand carbon pools and fluxes resulting from fine roots dynamics. The minirhizotron method is now a widely used technique, in which a transparent tube is inserted into the soil and researchers count an increase and decrease of roots along the tube using images taken by a minirhizotron camera or minirhizotron video camera inside the tube. This method allows us to observe root behavior directly without destruction, but has several weaknesses; e.g., the difficulty of scaling up the results to stand level because of the small observation windows. Also, most of the image analysis are performed manually, which may yield insufficient quantitative and objective data. Recently, scanner method has been proposed, which can produce much bigger-size images (A4-size) with lower cost than those of the minirhizotron methods. However, laborious and time-consuming image analysis still limits the applicability of this method. In this study, therefore, we aimed to develop a new protocol for scanner image analysis to extract root behavior in soil. We evaluated applicability of this method in two ways; 1) the impact of different observers including root-study professionals, semi- and non-professionals on the detected results of root dynamics such as abundance, growth, and decomposition, and 2) the impact of window size on the results using a random sampling basis exercise. We applied our new protocol to analyze temporal changes of root behavior from sequential scanner images derived from a Bornean tropical forests. The results detected by the six observers showed considerable concordance in temporal changes in the abundance and the growth of fine roots but less in the decomposition. We also examined potential errors due to window size in the temporal changes in abundance and growth using the detected results, suggesting high applicability of the scanner methods with wide observation windows.

Fine root biomass, necromass and chemistry during seven years of elevated aluminium concentrations in the soil solution of a middle-aged Picea abies stand.

PubMed

Eldhuset, Toril D; Lange, Holger; de Wit, Helene A

2006-10-01

Toxic effects of aluminium (Al) on Picea abies (L.) Karst. (Norway spruce) trees are well documented in laboratory-scale experiments, but field-based evidence is scarce. This paper presents results on fine root growth and chemistry from a field manipulation experiment in a P. abies stand that was 45 years old when the experiment started in 1996. Different amounts of dissolved aluminium were added as AlCl3 by means of periodic irrigation during the growing season in the period 1997-2002. Potentially toxic concentrations of Al in the soil solution were obtained. Fine roots were studied from direct cores (1996) and sequential root ingrowth cores (1999, 2001, 2002) in the mineral soil (0-40 cm). We tested two hypotheses: (1) elevated concentration of Al in the root zone leads to significant changes in root biomass, partitioning into fine, coarse, living or dead fractions, and distribution with depth; (2) elevated Al concentration leads to a noticeable uptake of Al and reduced uptake of Ca and Mg; this results in Ca and Mg depletion in roots. Hypothesis 1 was only marginally supported, as just a few significant treatment effects on biomass were found. Hypothesis 2 was supported in part; Al addition led to increased root concentrations of Al in 1999 and 2002 and reduced Mg/Al in 1999. Comparison of roots from subsequent root samplings showed a decrease in Al and S over time. The results illustrated that 7 years of elevated Al(tot) concentrations in the soil solution up to 200 microM are not likely to affect root growth. We also discuss possible improvements of the experimental approach.

Predicting the Spatial Variability of Fuel Moisture Content in Mountainous Eucalyptus Forests

NASA Astrophysics Data System (ADS)

Sheridan, G. J.; Nyman, P.; Lane, P. N. J.; Metzen, D.

2014-12-01

In steep mountainous landscapes, topographic aspect can play a significant role in small-scale (ie. scales in the order of 10's ha) variability in surface fuel moisture. Experimental sites for monitoring microclimate variables and moisture content in litter and in near-surface soils were established at a control site and on four contrasting aspects (north, south, east and west) in southeast Australia. At each of the four microclimate sites sensors are arranged to measure the soil moisture (2 replicates), surface fuel moisture at 2.5cm depth (12 replicates), precipitation throughfall (3 replicates), radiation (3 replicates), and screen level relative humidity, air temperature, leaf wetness, and wind speed (1 replicate of each). Temperature and relative humidity are also measured within the dead fine surface fuel using Ibutton's (4 replicates). All measurements are logged continuously at 15 min intervals. The moisture content of the surface fuel is estimated using a novel method involving high-replication of low-cost continuous soil moisture sensors placed at the centre of a 5cm deep sample of fine dead surface fuel, referred to here as "litter-packs". The litter-packs were constructed from fuels collected from the area surrounding the microclimate site. The initial results show the moisture regime on the forest floor was highly sensitive to the incoming shortwave radiation, which was up to 6 times higher in the north-facing (equatorial) slopes due to slope orientation and the sparse vegetation compared to vegetation on the south-facing (polar facing) slopes. Differences in shortwave radiation resulted in peak temperatures within the litter that were up to 2 times higher on the equatorial-facing site than those on the polar-facing site. For instance, on a day in November 2013 with maximum open air temperature of 35o C, the temperatures within the litter layer at the north-facing and south-facing sites were 54o C and 32o C, respectively, despite air temperature at the two sites differing by less than 2o C. The minimum gravimetric water content in the litter layer on the same day was 21% on the equatorial-facing slope and 85% on the polar-facing slope. The experimental data has been used to calibrate a topographic downscaling algorithm, yielding estimates of surface fuel moisture at 20m resolution.

OPTIMIZING MINIRHIZOTRON SAMPLE FREQUENCY FOR AN EVERGREEN AND DECIDIOUS TREE SPECIES

EPA Science Inventory

Increasingly minirhizotrons are being used in natural ecosystems to determine fine root production and turnover, as they provide a nondestructive, in situ method for studying fine root dynamics. Our objective is to determine how image collection frequency influences estimates of ...

Contribution of fine tree roots to the silicon cycle in a temperate forest ecosystem developed on three soil types

NASA Astrophysics Data System (ADS)

Turpault, Marie-Pierre; Calvaruso, Christophe; Kirchen, Gil; Redon, Paul-Olivier; Cochet, Carine

2018-04-01

The role of forest vegetation in the silicon (Si) cycle has been widely examined. However, to date, little is known about the specific role of fine roots. The main objective of our study was to assess the influence of fine roots on the Si cycle in a temperate forest in north-eastern France. Silicon pools and fluxes in vegetal solid and solution phases were quantified within each ecosystem compartment, i.e. in the atmosphere, above-ground and below-ground tree tissues, forest floor and different soil layers, on three plots, each with different soil types, i.e. Dystric Cambisol (DC), Eutric Cambisol (EC) and Rendzic Leptosol (RL). In this study, we took advantage of a natural soil gradient, from shallow calcic soil to deep moderately acidic soil, with similar climates, atmospheric depositions, species compositions and management. Soil solutions were measured monthly for 4 years to study the seasonal dynamics of Si fluxes. A budget of dissolved Si (DSi) was also determined for the forest floor and soil layers. Our study highlighted the major role of fine roots in the Si cycle in forest ecosystems for all soil types. Due to the abundance of fine roots mainly in the superficial soil layers, their high Si concentration (equivalent to that of leaves and 2 orders higher than that of coarse roots) and their rapid turnover rate (approximately 1 year), the mean annual Si fluxes in fine roots in the three plots were 68 and 110 kg ha-1 yr-1 for the RL and the DC, respectively. The turnover rates of fine roots and leaves were approximately 71 and 28 % of the total Si taken up by trees each year, demonstrating the importance of biological recycling in the Si cycle in forests. Less than 1 % of the Si taken up by trees each year accumulated in the perennial tissues. This study also demonstrated the influence of soil type on the concentration of Si in the annual tissues and therefore on the Si fluxes in forests. The concentrations of Si in leaves and fine roots were approximately 1.5-2.0 times higher in the Si-rich DC compared to the Si-poor RL. In terms of the DSi budget, DSi production was large in the three plots in the forest floor (9.9 to 12.7 kg ha-1 yr-1), as well as in the superficial soil layer (5.3 to 14.5 kg ha-1 yr-1), and decreased with soil depth. An immobilization of DSi was even observed at 90 cm depth in plot DC (-1.7 kg ha-1 yr-1). The amount of Si leached from the soil profile was relatively low compared to the annual uptake by trees (13 % in plot DC to 29 % in plot RL). The monthly measurements demonstrated that the seasonal dynamics of the DSi budget were mainly linked to biological activity. Notably, the peak of dissolved Si production in the superficial soil layer occurred during winter and probably resulted from fine-root decomposition. Our study reveals that biological processes, particularly those involving fine roots, play a predominant role in the Si cycle in temperate forest ecosystems, while the geochemical processes appear to be limited.

Effects of root exudates of woody species on the soil anti-erodibility in the rhizosphere in a karst region, China

PubMed Central

Chen, Mouhui

2017-01-01

Introduction Rhizospheres, the most active interfaces between plants and soils, play a central role in the long-term maintenance of the biosphere. The anti-erodibility of soils (AES) regulated by the root exudates is crucial to the soil stability in the rhizospheres. However, scientists still debate (1) the key organic matter of the root exudates affecting the AES and (2) the interspecific variation of these root exudates. Methods We used an incubation of soils to test the effects of the root exudates from eight woody plant species on the change in soil aggregation and identified the organic matter in these root exudates with gas chromatography-mass spectrometry (GC-MS) and biochemical methods. Furthermore, the relationships between the organic matter in the exudates and the AES in the rhizospheres of 34 additional tree species were analyzed. Results The water-stable aggregates of the soils incubated with the root exudates increased by 15%–50% on average compared with control samples. The interspecific differences were significant. The root exudates included hundreds of specific organic matter types; hydrocarbon, total sugar, total amino acids, and phenolic compounds were crucial to the AES. These organic matter types could explain approximately 20–75% of the variation in the total effect of the root exudates on the AES, which was quantified based on the aggregate status, degree of aggregation, dispersion ratio, and dispersion coefficient. Discussion The effects of the root exudates on the AES and the interspecific variation are as important as that of root density, litters, and vegetation covers. Many studies explored the effects of root density, litters, vegetation covers, and vegetation types on the AES, but little attention has been paid to the effects of the root exudates on the AES. Different plants secrete different relative contents of organic matter resulting in the variation of the effect of the root exudates on the AES. Our study quantified the causal relationships between the root exudates and the AES using modeling experiments in laboratory and field observations and indicated the interspecific variation of the AES and organic matter of the root exudates. Conclusions More organic compounds of the exudates related to the AES were recognized in this study. These results enhance the understanding of the soil stability at a slope and can be applied to ecosystem restoration. PMID:28265508

Root productivity of deciduous and evergreen species identified using a molecular approach

NASA Astrophysics Data System (ADS)

Ellsworth, P.; Sternberg, L. O.

2012-12-01

The linkage between leaf traits and root structure may explain how plants integrate above and belowground traits into whole plant adaptations to environmental stresses. In dry seasonal forests, the lack of dry season precipitation dries out the relatively nutrient-rich shallow soil, leaving shallow soil water and nutrients inaccessible to uptake until the wet season. In tropical or subtropical seasonal dry forests, deciduousness may allow for the survival of shallow fine roots during the dry season. Losing leaves during the dry season reduces aboveground plant water demand, and a greater proportion of water extracted from deep soil can be used to maintain shallow roots until the wet season. Higher shallow root survival through the dry season than evergreen species means that deciduous species can take advantage of the nutrient pulse associated with the onset of the wet season. To test the above hypothesis, fine roots were collected from soil cores in a seasonally dry forest during the dry season, onset of the wet season, and the wet season and were identified to selected evergreen and deciduous study species. The fine roots of two of the selected species (Lyonia ferruginea and Carya floridana) could be identified from visual characteristics. The other three study species, which were all from the genus Quercus (Q. geminata, Q. myrtifolia, and Q. laevis), were impossible to separate visually. We developed a PCR-based restriction fragment length polymorphism (PCR-RFLP) technique, which provided a quick, simple, low-cost way to identify the species of all fine roots of our study species. We extracted DNA from all roots that were not visually identified, amplified the internal transcribed spacer region (ITS), digested the ITS region with the restriction enzyme TaqαI, and used gel electrophoresis to separate DNA fragments. Using a PCR-RFLP based root identification key that we developed for the species at Archbold Biological Station, all species that could not be identified visually were separated based on each species ' unique banding pattern of restriction fragments. Approximately 2,500 roots were identified using PCR-RFLP and approximately 1,500 more roots were identified visually. Identifying fine roots to species allows for species-level analysis of root productivity in this in situ study.

Viewing forests from below: fine root mass declines relative to leaf area in aging lodgepole pine stands.

PubMed

Schoonmaker, A S; Lieffers, V J; Landhäusser, S M

2016-07-01

In the continued quest to explain the decline in productivity and vigor with aging forest stands, the most poorly studied area relates to root system change in time. This paper measures the wood production, root and leaf area (and mass) in a chronosequence of fire-origin lodgepole pine (Pinus contorta Loudon) stands consisting of four age classes (12, 21, 53, and ≥100 years), each replicated ~ five times. Wood productivity was greatest in the 53-year-old stands and then declined in the ≥100-year-old stands. Growth efficiency, the quantity of wood produced per unit leaf mass, steadily declined with age. Leaf mass and fine root mass plateaued between the 53- and ≥100-year-old stands, but leaf area index actually increased in the older stands. An increase in the leaf area index:fine root area ratio supports the idea that older stand are potentially limited by soil resources. Other factors contributing to slower growth in older stands might be lower soil temperatures and increased self-shading due to the clumped nature of crowns. Collectively, the proportionally greater reduction in fine roots in older stands might be the variable that predisposes these forests to be at a potentially greater risk of stress-induced mortality.

When the forest dies: the response of forest soil fungi to a bark beetle-induced tree dieback

PubMed Central

Štursová, Martina; Šnajdr, Jaroslav; Cajthaml, Tomáš; Bárta, Jiří; Šantrůčková, Hana; Baldrian, Petr

2014-01-01

Coniferous forests cover extensive areas of the boreal and temperate zones. Owing to their primary production and C storage, they have an important role in the global carbon balance. Forest disturbances such as forest fires, windthrows or insect pest outbreaks have a substantial effect on the functioning of these ecosystems. Recent decades have seen an increase in the areas affected by disturbances in both North America and Europe, with indications that this increase is due to both local human activity and global climate change. Here we examine the structural and functional response of the litter and soil microbial community in a Picea abies forest to tree dieback following an invasion of the bark beetle Ips typographus, with a specific focus on the fungal community. The insect-induced disturbance rapidly and profoundly changed vegetation and nutrient availability by killing spruce trees so that the readily available root exudates were replaced by more recalcitrant, polymeric plant biomass components. Owing to the dramatic decrease in photosynthesis, the rate of decomposition processes in the ecosystem decreased as soon as the one-time litter input had been processed. The fungal community showed profound changes, including a decrease in biomass (2.5-fold in the litter and 12-fold in the soil) together with the disappearance of fungi symbiotic with tree roots and a relative increase in saprotrophic taxa. Within the latter group, successive changes reflected the changing availability of needle litter and woody debris. Bacterial biomass appeared to be either unaffected or increased after the disturbance, resulting in a substantial increase in the bacterial/fungal biomass ratio. PMID:24671082

The invasive species Alliaria petiolata (garlic mustard) increases soil nutrient availability in northern hardwood-conifer forests.

PubMed

Rodgers, Vikki L; Wolfe, Benjamin E; Werden, Leland K; Finzi, Adrien C

2008-09-01

The invasion of non-native plants can alter the diversity and activity of soil microorganisms and nutrient cycling within forests. We used field studies to analyze the impact of a successful invasive groundcover, Alliaria petiolata, on fungal diversity, soil nutrient availability, and pH in five northeastern US forests. We also used laboratory and greenhouse experiments to test three mechanisms by which A. petiolata may alter soil processes: (1) the release of volatile, cyanogenic glucosides from plant tissue; (2) the exudation of plant secondary compounds from roots; and (3) the decomposition of litter. Fungal community composition was significantly different between invaded and uninvaded soils at one site. Compared to uninvaded plots, plots invaded by A. petiolata were consistently and significantly higher in N, P, Ca and Mg availability, and soil pH. In the laboratory, the release of volatile compounds from the leaves of A. petiolata did not significantly alter soil N availability. Similarly, in the greenhouse, the colonization of native soils by A. petiolata roots did not alter soil nutrient cycling, implying that the exudation of secondary compounds has little effect on soil processes. In a leaf litter decomposition experiment, however, green rosette leaves of A. petiolata significantly increased the rate of decomposition of native tree species. The accelerated decomposition of leaf litter from native trees in the presence of A. petiolata rosette leaves shows that the death of these high-nutrient-content leaves stimulates decomposition to a greater extent than any negative effect that secondary compounds may have on the activity of the microbes decomposing the native litter. The results presented here, integrated with recent related studies, suggest that this invasive plant may change soil nutrient availability in such a way as to create a positive feedback between site occupancy and continued proliferation.

Inundation, vegetation, and sediment effects on litter decomposition in Pacific Coast tidal marshes

USGS Publications Warehouse

Janousek, Christopher; Buffington, Kevin J.; Guntenspergen, Glenn R.; Thorne, Karen M.; Dugger, Bruce D.; Takekawa, John Y.

2017-01-01

The cycling and sequestration of carbon are important ecosystem functions of estuarine wetlands that may be affected by climate change. We conducted experiments across a latitudinal and climate gradient of tidal marshes in the northeast Pacific to evaluate the effects of climate- and vegetation-related factors on litter decomposition. We manipulated tidal exposure and litter type in experimental mesocosms at two sites and used variation across marsh landscapes at seven sites to test for relationships between decomposition and marsh elevation, soil temperature, vegetation composition, litter quality, and sediment organic content. A greater than tenfold increase in manipulated tidal inundation resulted in small increases in decomposition of roots and rhizomes of two species, but no significant change in decay rates of shoots of three other species. In contrast, across the latitudinal gradient, decomposition rates of Salicornia pacifica litter were greater in high marsh than in low marsh. Rates were not correlated with sediment temperature or organic content, but were associated with plant assemblage structure including above-ground cover, species composition, and species richness. Decomposition rates also varied by litter type; at two sites in the Pacific Northwest, the grasses Deschampsia cespitosa and Distichlis spicata decomposed more slowly than the forb S. pacifica. Our data suggest that elevation gradients and vegetation structure in tidal marshes both affect rates of litter decay, potentially leading to complex spatial patterns in sediment carbon dynamics. Climate change may thus have direct effects on rates of decomposition through increased inundation from sea-level rise and indirect effects through changing plant community composition.

Multiyear fate of a 15 N tracer in a mixed deciduous forest: retention, redistribution, and differences by mycorrhizal association.

PubMed

Goodale, Christine L

2017-02-01

The impact of atmospheric nitrogen deposition on forest ecosystems depends in large part on its fate. Past tracer studies show that litter and soils dominate the short-term fate of added 15 N, yet few have examined its longer term dynamics or differences among forest types. This study examined the fate of a 15 N-NO3- tracer over 5-6 years in a mixed deciduous stand that was evenly composed of trees with ectomycorrhizal and arbuscular mycorrhizal associations. The tracer was expected to slowly mineralize from its main initial fate in litter and surface soil, with some 15 N moving to trees, some to deeper soil, and some net losses. Recovery of added 15 N in trees and litterfall totaled 11.3% both 1 and 5-6 years after the tracer addition, as 15 N redistributed from fine and especially coarse roots into cumulative litterfall and small accumulations in woody tissues. Estimates of potential carbon sequestration from tree 15 N recovery amounted to 12-14 kg C per kg of N deposition. Tree 15 N acquisition occurred within the first year after the tracer addition, with no subsequent additional net transfer of 15 N from detrital to plant pools. In both years, ectomycorrhizal trees gained 50% more of the tracer than did trees with arbuscular mycorrhizae. Much of the 15 N recovered in wood occurred in tree rings formed prior to the 15 N addition, demonstrating the mobility of N in wood. Tracer recovery rapidly decreased over time in surface litter material and accumulated in both shallow and deep soil, perhaps through mixing by earthworms. Overall, results showed redistribution of tracer 15 N through trees and surface soils without any losses, as whole-ecosystem recovery remained constant between 1 and 5-6 years at 70% of the 15 N addition. These results demonstrate the persistent ecosystem retention of N deposition even as it redistributes, without additional plant uptake over this timescale. © 2016 John Wiley & Sons Ltd.

Soil microbial communities and enzyme activities under various poultry litter application rates.

PubMed

Acosta-Martínez, V; Harmel, R Daren

2006-01-01

The potential excessive nutrient and/or microbial loading from mismanaged land application of organic fertilizers is forcing changes in animal waste management. Currently, it is not clear to what extent different rates of poultry litter impact soil microbial communities, which control nutrient availability, organic matter quality and quantity, and soil degradation potential. From 2002 to 2004, we investigated the microbial community and several enzyme activities in a Vertisol soil (fine, smectitic, thermic, Udic Haplustert) at 0 to 15 cm as affected by different rates of poultry litter application to pasture (0, 6.7, and 13.4 Mg ha(-1)) and cultivated sites (0, 4.5, 6.7, 9.0, 11.2, and 13.4 Mg ha(-1)) in Texas, USA. No differences in soil pH (average: 7.9), total N (pasture: 2.01-3.53, cultivated: 1.09-1.98 g kg(-1) soil) or organic C (pasture average: 25-26.7, cultivated average: 13.9-16.1 g kg(-1) soil) were observed following the first four years of litter application. Microbial biomass carbon (MBC) and nitrogen (MBN) increased at litter rates greater than 6.7 Mg ha(-1) (pasture: MBC = >863, MBN = >88 mg kg(-1) soil) compared to sites with no applied litter (MBC = 722, MBN = 69 mg kg(-1) soil). Enzyme activities of C (beta-glucosidase, alpha-galactosidase, beta-glucosaminidase) or N cycling (beta-glucosaminidase) were increased at litter rates greater than 6.7 Mg ha(-1). Enzyme activities of P (alkaline phosphatase) and S (arylsulfatase) mineralization showed the same response in pasture, but they were only increased at the highest (9.0, 11.2, and 13.4 Mg ha(-1)) litter application rates in cultivated sites. According to fatty acid methyl ester (FAME) analysis, the pasture soils experienced shifts to higher bacterial populations at litter rates of 6.7 Mg ha(-1), and shifts to higher fungal populations at the highest litter application rates in cultivated sites. While rates greater than 6.7 Mg ha(-1) provided rapid enhancement of the soil microbial populations and enzymatic activities, they result in P application in excess of crop needs. Thus, studies will continue to investigate whether litter application at rates below 6.7 Mg ha(-1), previously recommended to maintain water quality, will result in similar improved soil microbial and biochemical functioning with continued annual litter application.

Effects of river flow regime on cottonwood leaf litter dynamics in semi-arid northwestern Colorado

USGS Publications Warehouse

Andersen, D.C.; Nelson, S.M.

2003-01-01

We compared production and breakdown of Fremont cottonwood (Populus deltoides wislizenii) leaf litter at matched floodplain sites on the regulated Green River and unregulated Yampa River in semi-arid northwestern Colorado. Litter production under trees was similar at sites in 1999 (250 g/m2, oven-dry) but lower in 2000 (215 and 130 g/m2), a drought year that also featured an outbreak of defoliating beetles at the Yampa River site. Our production values were similar to the few others reported for riparian forests within semi-arid or arid areas. Leaf litter in portions of the floodplain not inundated during the spring flood lost organic matter at the same rate as leaves placed in upland sites in 1998 and 2000: 35 to 50% of organic matter during an approximately 160-day spring and summer period. Inundated litter lost 55 to 90% of its organic matter during the same period. Organic matter loss from inundated leaves increased with duration of inundation and with deposition of fine sediment. Pooled across locations, leafpack data suggested that nitrogen concentration (mg N/kg organic matter) increased until about 65% of the initial organic matter was lost. This increase likely reflected the buildup of microbial decomposer populations. The role of insects and other macroinvertebrates in litter breakdown apparently was minor at both sites. Large spatial and temporal variation in litter dynamics in aridland floodplain settings is ensured by microtopographic variation in the alluvial surface coupled with year-to-year variation associated with most natural flood regimes. Factors reducing flood flow frequency or magnitude will reduce overall breakdown rates on the floodplain towards those found in drier upland environments.

Variations in soil carbon sequestration and their determinants along a precipitation gradient in seasonally dry tropical forest ecosystems.

PubMed

Campo, Julio; Merino, Agustín

2016-05-01

The effect of precipitation regime on the C cycle of tropical forests is poorly understood, despite the existence of models that suggest a drier climate may substantially alter the source-sink function of these ecosystems. Along a precipitation regime gradient containing 12 mature seasonally dry tropical forests growing under otherwise similar conditions (similar annual temperature, rainfall seasonality, and geological substrate), we analyzed the influence of variation in annual precipitation (1240 to 642 mm) and duration of seasonal drought on soil C. We investigated litterfall, decomposition in the forest floor, and C storage in the mineral soil, and analyzed the dependence of these processes and pools on precipitation. Litterfall decreased slightly - about 10% - from stands with 1240 mm yr(-1) to those with 642 mm yr(-1), while the decomposition decreased by 56%. Reduced precipitation strongly affected C storage and basal respiration in the mineral soil. Higher soil C storage at the drier sites was also related to the higher chemical recalcitrance of litter (fine roots and forest floor) and the presence of charcoal across sites, suggesting an important indirect influence of climate on C sequestration. Basal respiration was controlled by the amount of recalcitrant organic matter in the mineral soil. We conclude that in these forest ecosystems, the long-term consequences of decreased precipitation would be an increase in organic layer and mineral soil C storage, mainly due to lower decomposition and higher chemical recalcitrance of organic matter, resulting from changes in litter composition and, likely also, wildfire patterns. This could turn these seasonally dry tropical forests into significant soil C sinks under the predicted longer drought periods if primary productivity is maintained. © 2016 John Wiley & Sons Ltd.

Effects of warming on ectomycorrhizal colonization and nitrogen nutrition of Picea asperata seedlings grown in two contrasting forest ecosystems

PubMed Central

Li, Yuejiao; Sun, Didi; Li, Dandan; Xu, Zhenfeng; Zhao, Chunzhang; Lin, Honghui; Liu, Qing

2015-01-01

Ectomycorrhiza (ECM) plays an important role in plant nitrogen (N) nutrition and regulates plant responded to climate warming. We conducted a field experiment in a natural forest and a plantation in the eastern Tibetan Plateau to estimate the warming effects of open-top chambers (OTC) on ECM and N nutrition of Picea asperata seedlings. Four-year warming significantly decreased ECM colonization, ECM fungal biomass, fine root vigor, and the N concentration of leaf, stem and coarse root, but significantly increased fine root N concentration and N content of leaf, stem, fine root and whole plant in natural forest. Contrarily, warming induced no obvious change in most of these parameters in plantation. Moreover, warming decreased rhizospheric soil inorganic N content in both forests. Our results showed that four-year warming was not beneficial for ECM colonization of P. asperata seedlings in the two forests, and the seedlings in natural forest were more sensitive and flexible to experimental warming than in plantation. The changes of ECM colonization and fine root biomass for effective N uptake would be good for plant growth and remit N leaching under future warming in natural forest. PMID:26655633

A national scale estimation of soil carbon stocks of Pinus densiflora forests in Korea: a modelling approach

NASA Astrophysics Data System (ADS)

Yi, K.; Park, C.; Ryu, S.; Lee, K.; Yi, M.; Kim, C.; Park, G.; Kim, R.; Son, Y.

2011-12-01

Soil carbon (C) stocks of Pinus densiflora forests in Korea were estimated using a generic forest soil C dynamics model based on the process of dead organic matter input and decomposition. Annual input of dead organic matter to the soil was determined by stand biomass and turnover rates of tree components (stem, branch, twig, foliage, coarse root, and fine root). The model was designed to have a simplified structure consisting of three dead organic matter C (DOC) pools (aboveground woody debris (AWD), belowground woody debris (BWD), and litter (LTR) pool) and one soil organic C (SOC) pool. C flows in the model were regulated by six turnover rates of stem, branch, twig, foliage, coarse root, and fine root, and four decay rates of AWD, BWD, LTR, and SOC. To simulate the soil C stocks of P. densiflora forests, statistical data of forest land area (1,339,791 ha) and growing stock (191,896,089 m3) sorted by region (nine provinces and seven metropolitan cities) and stand age class (11 to 20- (II), 21 to 30- (III), 31 to 40- (IV), 41 to 50- (V), and 51 to 60-year-old (VI)) were used. The growing stock of each stand age class was calculated for every region and representable site index was also determined by consulting the yield table. Other model parameters related to the stand biomass, annual input of dead organic matter and decomposition were estimated from previous studies conducted on P. densiflora forests in Korea, which were also applied for model validation. As a result of simulation, total soil C stock of P. densiflora forests were estimated as 53.9 MtC and soil C stocks per unit area ranged from 28.71 to 47.81 tC ha-1 within the soil depth of 30 cm. Also, soil C stocks in the P. densiflora forests of age class II, III, IV, V, and VI were 16,780,818, 21,450,812, 12,677,872, 2,366,939, and 578,623 tC, respectively, and highly related to the distribution of age classes. Soil C stocks per unit area initially decreased with stand age class and started to increase after the stand age class of V. Regional soil C stocks ranged from 9,805 to 15,595,802 tC, and were generally proportional to the forest land area. Our results suggest an approach to estimate soil C stock on a national scale by using a computer model and manipulating the existing statistical data.

Variable role of aquatic macroinvertebrates in initial breakdown of seasonal leaf litter inputs to a cold-desert river

USGS Publications Warehouse

Nelson, S.M.; Andersen, D.C.

2007-01-01

We used coarse-mesh and fine-mesh leafpacks to examine the importance of aquatic macroinvertebrates in the breakdown of floodplain tree leaf litter that seasonally entered a sand-bedded reach of the sixth-order Yampa River in semiarid Colorado. Leafpacks were positioned off the easily mobilized channel bed, mimicking litter trapped in debris piles. Organic matter (OM) loss was fastest for leaves collected from the floodplain and placed in the river in spring (k = 0.029/day) and slowest for leaves collected and placed in the river in winter (0.006/day). Macroinvertebrates were most abundant in winter and spring leaves, but seemed important to processing only in spring, when exclusion by fine mesh reduced OM loss by 25% and nitrogen loss by 65% in spring leaves. Macroinvertebrates seemed to have little role in processing of autumn, winter, or summer leaves over the 50-day to 104-day monitoring periods. Desiccation during bouts of low discharge and sediment deposition on leaves limited invertebrate processing in summer and autumn, whereas processing of winter leaves, which supported relatively large numbers of shredders, might have been restricted by ice formation and low water temperatures. These results were consistent with the concept that microbial processing dominates in higher-order rivers, but suggested that macroinvertebrate processing can be locally important in higher-order desert rivers in seasons or years with favorable discharge and water quality conditions.

Nutrients and temperature additively increase stream microbial respiration

Treesearch

David W. P. Manning; Amy D. Rosemond; Vladislav Gulis; Jonathan P. Benstead; John S. Kominoski

2017-01-01

Rising temperatures and nutrient enrichment are co‐occurring global‐change drivers that stimulate microbial respiration of detrital carbon, but nutrient effects on the temperature dependence of respiration in aquatic ecosystems remain uncertain. We measured respiration rates associated with leaf litter, wood, and fine benthic organic matter (FBOM) across...

Effects of tillage and broiler litter on crop productions in an eroded soil

USDA-ARS?s Scientific Manuscript database

Soils in the southeastern United States, where the climate is subtropical, are severely eroded from intense row crop agriculture many years ago. This study was initiated in 2005 at the Plant Material Center, NRCS, in Coffeeville MS, on an Loring silt loam (fine-silty, mixed, thermic, Glossic Fragiud...

Contrasting response of stream detritivores to long-term nutrient enrichment

Treesearch

W.F. Cross; B.R. Johnson; J.R. Wallace; A.D. Rosemond

2005-01-01

We examined growth and production responses of two dominant stream detritivores (chironomids and Tallaperla spp. stoneflies) at opposite ends of the "slow-fast" life-history continuum and with distinct feeding characteristics (i.e., consumption of fine particulate organic matter vs. leaf litter) to a 2-yr experimental nutrient enrichment of...

Equilibrium Moisture Content of Common Fine Fuels in Southeastern Forests

Treesearch

W.H. Blackmarr

1971-01-01

Nine different kinds of forest litter found in ground fuel complexes of southeastern forests were subjected to step-wise changes in relative humidity to determine their equilibrium moisture content (EMC) at different levels of relative humidity. The adsorption and desorption EMC curves for these fuels exhibited the typical hysteresis loop...

The Influence of Shredder Feeding on Fungal Activity in a Nutrient-Enriched Stream and an Unaltered Stream

NASA Astrophysics Data System (ADS)

Chung, N.; Suberkopp, K.

2005-05-01

The effect of shredder feeding on aquatic hyphomycete communities associated with submerged leaves was studied in two southern Appalachian headwater streams in North Carolina. Coarse and fine mesh litter bags containing red maple (Acer rubrum) leaves were placed in the nutrient-enriched stream and in the reference stream and were retrieved monthly. Both shredder feeding and nutrient enrichment enhanced breakdown rates. The breakdown rates of leaves in coarse mesh bags in the reference stream (k = 0.0275) and fine mesh bags in the nutrient enriched stream (k = 0.0272) were not significantly different, suggesting that the shredding effect on litter breakdown was offset by higher fungal activity as a result of nutrient enrichment. Fungal sporulation rates and biomass (based on ergosterol concentrations) were higher in the nutrient enriched than in the reference stream, but neither fungal biomass nor sporulation rate was affected by shredder feeding. Species richness was higher in the nutrient-enriched than in the reference stream. The enrichment with nutrients altered fungal community composition more than shredder feeding.

Research and the problems of litter and medical wastes on the UK coastline.

PubMed

Philipp, R; Pond, K; Rees, G

1997-01-01

Recent research has shown that recreational water and bathing beach quality are associated with injury, infection and personal well-being. Continued surveillance is essential to audit the environmental and associated health trends. In the Coastwatch UK project and since 1989, annual surveys each autumn have been undertaken during a two-week study period, into the extent of littering of the UK coastline. The Public Health Laboratory Service also collects data on the use of hepatitis B immunoglobulin. In these studies it is now possible to examine time trends. The findings are not reassuring. They help to justify present concern about the health effects of discarded litter and medical waste and fears that environmental degradation could lead to loss of income from tourism. In response, some health and local authorities have started public education programmes, supplying litter bins on or near bathing beaches, emptying them regularly and undertaking beach cleansing during the summer months. The UK government is also introducing new legislation that will require 6 mm fine mesh wire screens on all shore-based sewage outlets around the UK coastline. Continued monitoring is needed to assess the effectiveness of these interventions. The need for greater personal responsibility is particularly identified.

ESTIMATES OF DOUGLAS-FIR FINE ROOT PRODUCTION AND MORTALITY FROM MINIRHIZOTRONS

EPA Science Inventory

Minirhizotrons were used to assess the influence of soil resources on fine root (diameter < 2 mm) production, mortality, and standing crop over a two-year period. Two study sites were located, along an elevational transect, in the Oregon Cascade Mountains in mature (> 100 years o...

Fine root respiration in mature eastern white pine (Pinus strobus) in situ: the importance of CO2 in controlled environments.

Treesearch

Barton D. Clinton; James M. Vose

1999-01-01

Clinton and Vose measured seasonal fine root respiration rate in situ while controlling chamber temperature and [CO2]. Atmospheric and [CO2] ([CO2]a) and measured soil [CO2] ([CO2]s) were alternately delivered...

Coupling fine-scale root and canopy structure using ground-based remote sensing

Treesearch

Brady Hardiman; Christopher Gough; John Butnor; Gil Bohrer; Matteo Detto; Peter Curtis

2017-01-01

Ecosystem physical structure, defined by the quantity and spatial distribution of biomass, influences a range of ecosystem functions. Remote sensing tools permit the non-destructive characterization of canopy and root features, potentially providing opportunities to link above- and belowground structure at fine spatial resolution in...

Legacy effects of land-use modulate tree growth responses to climate extremes.

PubMed

Mausolf, Katharina; Härdtle, Werner; Jansen, Kirstin; Delory, Benjamin M; Hertel, Dietrich; Leuschner, Christoph; Temperton, Vicky M; von Oheimb, Goddert; Fichtner, Andreas

2018-05-10

Climate change can impact forest ecosystem processes via individual tree and community responses. While the importance of land-use legacies in modulating these processes have been increasingly recognised, evidence of former land-use mediated climate-growth relationships remain rare. We analysed how differences in former land-use (i.e. forest continuity) affect the growth response of European beech to climate extremes. Here, using dendrochronological and fine root data, we show that ancient forests (forests with a long forest continuity) and recent forests (forests afforested on former farmland) clearly differ with regard to climate-growth relationships. We found that sensitivity to climatic extremes was lower for trees growing in ancient forests, as reflected by significantly lower growth reductions during adverse climatic conditions. Fine root morphology also differed significantly between the former land-use types: on average, trees with high specific root length (SRL) and specific root area (SRA) and low root tissue density (RTD) were associated with recent forests, whereas the opposite traits were characteristic of ancient forests. Moreover, we found that trees of ancient forests hold a larger fine root system than trees of recent forests. Our results demonstrate that land-use legacy-mediated modifications in the size and morphology of the fine root system act as a mechanism in regulating drought resistance of beech, emphasising the need to consider the 'ecological memory' of forests when assessing or predicting the sensitivity of forest ecosystems to global environmental change.

Biochars impact on water infiltration and water quality through a compacted subsoil layer.

PubMed

Novak, Jeff; Sigua, Gilbert; Watts, Don; Cantrell, Keri; Shumaker, Paul; Szogi, Ariel; Johnson, Mark G; Spokas, Kurt

2016-01-01

Soils in the SE USA Coastal Plain region frequently have a compacted subsoil layer (E horizon), which is a barrier for water infiltration. Four different biochars were evaluated to increase water infiltration through a compacted horizon from a Norfolk soil (fine-loamy, kaolinitic, thermic, Typic Kandiudult). In addition, we also evaluated biochars effect on water quality. Biochars were produced by pyrolysis at 500 °C from pine chips (Pinus taeda), poultry litter (Gallus domesticus) feedstocks, and as blends (50:50 and 80:20) of pine chip:poultry litter. Prior to pyrolysis, the feedstocks were pelletized and sieved to >2-mm pellets. Each biochar was mixed with the subsoil at 20 g/kg (w/w) and the mixture was placed in columns. The columns were leached four times with Milli-Q water over 128 d of incubation. Except for the biochar produced from poultry litter, all other applied biochars resulted in significant water infiltration increases (0.157-0.219 mL min(-1); p<0.05) compared to the control (0.095 mL min(-1)). However, water infiltration in each treatment were influenced by additional water leaching. Leachates were enriched in PO4, SO4, Cl, Na, and K after addition of poultry litter biochar, however, their concentrations declined in pine chip blended biochar treatments and after multiple leaching. Adding biochars (except 100% poultry litter biochar) to a compacted subsoil layer can initially improve water infiltration, but, additional leaching revealed that the effect remained only for the 50:50 pine chip:poultry litter blended biochar while it declined in other biochar treatments. Published by Elsevier Ltd.

Dynamics of multiple elements in fast decomposing vegetable residues.

PubMed

Cao, Chun; Liu, Si-Qi; Ma, Zhen-Bang; Lin, Yun; Su, Qiong; Chen, Huan; Wang, Jun-Jian

2018-03-01

Litter decomposition regulates the cycling of nutrients and toxicants but is poorly studied in farmlands. To understand the unavoidable in-situ decomposition process, we quantified the dynamics of C, H, N, As, Ca, Cd, Cr, Cu, Fe, Hg, K, Mg, Mn, Na, Ni, Pb, and Zn during a 180-d decomposition study in leafy lettuce (Lactuca sativa var. longifoliaf) and rape (Brassica chinensis) residues in a wastewater-irrigated farmland in northwestern China. Different from most studied natural ecosystems, the managed vegetable farmland had a much faster litter decomposition rate (half-life of 18-60d), and interestingly, faster decomposition of roots relative to leaves for both the vegetables. Faster root decomposition can be explained by the initial biochemical composition (more O-alkyl C and less alkyl and aromatic C) but not the C/N stoichiometry. Multi-element dynamics varied greatly, with C, H, N, K, and Na being highly released (remaining proportion<20%), Ca, Cd, Cr, Mg, Ni, and Zn released, and As, Cu, Fe, Hg, Mn, and Pb possibly accumulated. Although vegetable residues serve as temporary sinks of some metal(loid)s, their fast decomposition, particularly for the O-alkyl-C-rich leafy-lettuce roots, suggest that toxic metal(loid)s can be released from residues, which therefore become secondary pollution sources. Copyright © 2017 Elsevier B.V. All rights reserved.

EFFECTS OF ELEVATED CO2 ON FINE ROOT DYNAMICS IN A MOJAVE DESERT COMMUNITY: A FACE STUDY

EPA Science Inventory

Fine roots ('1 mm diameter) are critical in plant water and nutrient absorption, and it is important to understand how rising atmospheric CO2 will affect them as part of terrestrial ecosystem responses to global change. This study's objective was to determine the effects of elev...

The effect of local ectomycorrhizal nitrogen supply on allocation of recent photosynthates within the mycorrhizosphere

NASA Astrophysics Data System (ADS)

Gorka, Stefan; Mayerhofer, Werner; Dietrich, Marlies; Gabriel, Raphael; Wiesenbauer, Julia; Martin, Victoria; Schweiger, Peter; Woebken, Dagmar; Richter, Andreas; Kaiser, Christina

2017-04-01

Understanding allocation patterns of carbon (C) released by plants into their soil environment is vital for understanding global C cycling. Plants release photosynthetically acquired C not only to the rhizosphere and respective soil bacteria, but also to associated mycorrhizal fungi. Mycorrhizal fungi extend further into the adjacent soil, mining for essential nutrients like nitrogen (N) and phosphorous (P), with a dramatically increased surface area compared to plant roots. Symbiotically, plants receive these nutrients in exchange for C. A reciprocal control on exchange rates has been shown in arbuscular mycorrhizal systems, but the situation remains equivocal for the ectomycorrhizal (EM) symbiosis. Furthermore, the symbiosis may conceptually be extended to interactions between mycorrhizal fungal hyphae and soil bacteria. For example, a transfer of plant-derived C from hyphae to surrounding soil microbial communities has been suggested, with however only limited experimental evidence. We hypothesized that (i) reciprocal reward within the EM symbiosis may be observed at the level of root system architecture, i.e. that plants allocate C preferentially to parts of their root system that receive more N by EM fungi, (ii) that EM fungi allocate recent photosynthates to soil bacteria, and (iii) that this C allocation is influenced by N availability. We conducted a split-root experiment with ectomycorrhizal beech (Fagus sylvatica) trees. Young trees were collected in the Wienerwald near Vienna. Each plant was transferred to a 'split-root'-box, dividing its root system into two parts, with each part growing into one of two disconnected soil compartments. Each of the two soil compartments was connected to a separated litter compartment by a mesh (35 μm) penetrable only for fungal hyphae, but not for roots. Stable isotope tracing was used for determining the fate of nutrients and photosynthates in this system, by applying 15N labelled ammonium and amino acids to only one of the two litter compartments, while exposing aboveground plants to a 13CO2 enriched atmosphere. Subsequently, we used EA-IRMS to trace isotopic signals in bulk components, and GC-MS/GC-IRMS for PLFA quantification. Our results show a rapid transport of 15N to plants via EM hyphae, and photosynthetically fixed 13C toward hyphal tips, with already significant enrichments 17 hours after 13CO2 labelling and 40 hours after 15N addition. No plant control for reciprocal C-N exchange at the bulk root scale was found. We argue that investigations at smaller scales are required, as regression analysis shows a trend towards reciprocal exchange (R2 = 0.32, p < 0.001) when separating roots into branches. Furthermore, we found significant enrichment of 13C in bacteria-specific PLFAs in the hyphae-exclusive litter compartment. This indicates a rapid allocation of recent photosynthates to remote soil bacteria through EM hyphae.

Does Litter Impart A Detectable Chemical Signal on Soil DOC? DOC Fluorescence Signatures in Soils Undergoing Long-Term Litter Manipulations

NASA Astrophysics Data System (ADS)

Lajtha, K.; Strid, A.; Lee, B. S.

2015-12-01

Soil dissolved organic carbon (DOC) is a small but crucial part of the forest carbon cycle. Characterizing the relationship between organic matter inputs to soil and DOC chemistry is crucial to understanding the ultimate fate of root carbon, fallen wood and needles. Chemical differences in the DOC pool may help to explain whether fractions are sorbed to mineral surfaces and contribute to accumulation of soil organic carbon, respired as CO2, or exported. Soil solution DOC was sampled from the detrital input and removal treatment (DIRT) plots located in the H.J. Andrews Experimental Forest, OR to determine whether detrital inputs impart a detectable signal on DOC in mineral soil. Multiple types of fresh litter extracts, along with lysimeter and soil extracts from DIRT treatment plots were characterized using UV-Vis and fluorescence spectroscopy coupled with the Cory and McKnight (2005) parallel factor analysis (PARAFAC) model. Principal component analysis of 13 unique fluorophores distinguished using PARAFAC show that litter and soil extracts (needles, wood of decomposition Class 1, Class 3 and Class 5, O-horizon, and A-horizon) each have distinct fluorescence signatures. However, while litter-leached DOC chemistry varies by litter type, neither lysimeter-collected DOC or soil extracts show statistically significant differences in fluorescence signatures among treatments, even after 17 years of litter manipulations. The lack of observed differences among DIRT treatments suggests a "Soil Blender" hypothesis whereby both abiotic and biotic mechanisms effectively homogenize organic carbon constituents within the dissolved pool. The results of this work emphasize the ability of sorption and biodegradation to homogenize soil DOC and demonstrate that fluorescence can be an effective fingerprinting technique for soil DOC composition.

Soil macrofauna webmasters of ecosystem

NASA Astrophysics Data System (ADS)

Frouz, Jan

2015-04-01

The role of plant roots and microflora in shaping many ecosystem processes is generally appreciated in the contrary rho role of soil mcrofauna in this context is assumed to be negligible and rather anecdotic. But more than half of the litter fall is consumed by soil fauna and soil fauna can also consume and or translocation substantial amount of soil. Here we demonstrate on example of post mining chronosequences how site colonization by soil fauna affect composition of whole soil biota community, plant succession and soil formation. Filed and laboratory experiments show that decomposition of fauna feces may be sped up compare to litter at the very beginning but in long term fauna feces decompose slower than litter. This is also supported by micro morphological observation which shows that fauna feces form substantial part of soil. Fauna feces also induce lover or even negative priming effect when introduced in soil in comparison with litter that triggers positive priming effect. Laboratory experiment show that fauna effect is context sensitive and is more pronounced in systems already affected by soil fauna. Soil mixing by soil fauna consequently affect environmental conditions in soils such as water holding capacity or nutrient availability, it also affect composition of decomposer food web including microbial community (fungal bacterial ratio) which feed back in alternation of plant community composition during succession This fauna activity is not constant everywhere the higher effect of fauna activity on litter layer was observed in temperate soils of deciduous forests and with litter having CN between 20-30. In conclusion soil fauna use directly only small proportion of energy in the litter but can substantially affect soil carbon turnover, soil formation, decomposer food web and plant community.

Fine-Root Ecology Database (FRED): A Global Collection of Root Trait Data with Coincident Site, Vegetation, Edaphic, and Climatic Data, Version 1

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iversen, C. M.; Powell, A. S.; McCormack, M. L.

To address the need for a centralized root trait database, we are compiling the Fine-Root Ecology Database (FRED) from published literature and unpublished data. FRED Version 1 (FRED 1.0) currently houses more than 70,000 observations of root traits and their associated site, vegetation, edaphic, and climatic conditions from across the globe (see image below, which shows the more than 1000 distinct locations associated with observations in FRED 1.0). Data collection is ongoing and will continue for the foreseeable future. The more than 300 root traits currently housed in FRED 1.0 are described in detail here. FRED is focused on finemore » roots (less than 2 mm), as coarse roots are studied using different methodology, often at very different scales, and have different traits and trait interpretations.« less

[Response of fine roots to soil nutrient spatial heterogeneity].

PubMed

Wang, Qingcheng; Cheng, Yunhuan

2004-06-01

The spatial heterogeneity is the complexity and variation of systems or their attributes, and the heterogeneity of soil nutrients is ubiquitous in all natural ecosystems. The scale of spatial heterogeneity varies considerably among different ecosystems, from tens of centimeters to hundred meters. Some of the scales can be detected by individual plant. Because the growth of individual plants can be strongly influenced by soil heterogeneity, it follows that the inter-specific competition should also be affected. During the long process of evolution, plants developed various plastic responses with their root system, including morphological, physiological and mycorrhizal plasticity, to maximize the nutrient acquisition from heterogeneous soil resources. Morphological plasticity, an adjustment in root system spatial allocation and architecture in response to spatial heterogeneous distribution of available soil resources, has been most intensively studied, and root proliferation in nutrient rich patches has been certified for many species. The species that do respond may have an increased rate of nutrient uptake, leading to a competitive advantage. Scale and precision are two important features employed in describing the size and foraging behavior of root system. It was hypothesized that scale and precision is negatively related, i. e., the species with high scale of root system tend to be a less precise forager. The outcomes of different research work have been diverse, far from reaching a consensus. Species with high scale are not necessarily less precise in fine root allocation, and vice versa. The proliferation of fine root in enriched micro-sites is species dependent, and also affected by other factors, such as patch attributes (size and nutrients concentration), nutrients, and overall soil fertility. Beside root proliferation in nutrient enriched patches, plants can also adapt themselves to the heterogeneous soil environment by altering other root characteristics such as fine root diameter, branch angle, length, and spatial architecture of root system. Physiological and mycorrhizal plasticity can add some influence on the morphological plasticity to some extent, but they are less studied. Roots located in different patches can quickly regulate their nutrient uptake kinetics within different nutrient patches, and increase overall nutrient uptake. Physiological response may, to certain extent, reduce morphological response, and is meaningful for plant growth on soils with frequently changing spatial and temporal heterogeneity. Mycorrhizal plasticity has been least studied so far. Some researches revealed that mycorrhiza, rather than fine root, proliferated in enriched patches. But, it is not the case with other studies. The proliferation of mycorrhiza within enriched patches is more profitable in term of carbon invest. The effect of fine root proliferation on nutrient uptake is complex, depending on ion mobility and whether or not neighboring plant exists. The influence of root plasticity on the growth of plants is species specific. Some species (sensitive species) gain growth benefit, while others don't. The ability of an individual plant to response to heterogeneous resources has significant effect on its competitive ability and its fate within the community, and eventually shapes the composition and structure of the community.

Combining stable isotope and carbohydrate analyses in phloem sap and fine roots to study seasonal changes of source-sink relationships in a Mediterranean beech forest.

PubMed

Scartazza, Andrea; Moscatello, Stefano; Matteucci, Giorgio; Battistelli, Alberto; Brugnoli, Enrico

2015-08-01

Carbon isotope composition (δ(13)C) and carbohydrate content of phloem sap and fine roots were measured in a Mediterranean beech (Fagus sylvatica L.) forest throughout the growing season to study seasonal changes of source-sink relationships. Seasonal variations of δ(13)C and content of phloem sap sugars, collected during the daylight period, reflected the changes in soil and plant water status. The correlation between δ(13)C and content of phloem sap sugars, collected from plants belonging to different social classes, was significantly positive only during the driest month of July. In this month, δ(13)C of phloem sap sugars was inversely related to the increment of trunk radial growth and positively related to δ(13)C of fine roots. We conclude that the relationship between δ(13)C and the amount of phloem sap sugars is affected by a combination of causes, such as sink strength, tree social class, changes in phloem anatomy and transport capacity, and phloem loading of sugars to restore sieve tube turgor following the reduced plant water potential under drought conditions. However, δ(13)C and sugar composition of fine roots suggested that phloem transport of leaf sucrose to this belowground component was not impaired by mild drought and that sucrose was in a large part allocated towards fine roots in July, depending on tree social class. Hence, fine roots could represent a functional carbon sink during the dry seasonal periods, when transport and use of assimilates in other sink tissues are reduced. These results indicate a strict link between above- and belowground processes and highlight a rapid response of this Mediterranean forest to changes in environmental drivers to regulate source-sink relationships and carbon sink capacity. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Assessing and ranking the flammability of some ornamental plant species to select firewise plants for landscaping in WUI (SE France).

NASA Astrophysics Data System (ADS)

Ganteaume, A.; Jappiot, M.; Lampin, C.

2012-04-01

The increasing urbanization of Wildland-Urban Interfaces (WUI) as well as the high fire occurrence in these areas requires the assessment and the ranking of the flammability of the ornamental vegetation surrounding houses especially that planted in hedges. Thus, the flammability of seven species, among those most frequently planted in hedges in Provence (South-Eastern France), were studied at particle level and at dead surface fuel level (litters) under laboratory conditions. The flammability parameters (ignition frequency, time-to-ignition, flaming duration) of the very fine particles (live leaves and particles <2 mm in diameter) were measured using an epiradiator as burning device. The flammability parameters (ignition frequency, time-to-ignition, flaming duration and initial flame propagation) of the undisturbed litter samples were recorded during burning experiments performed on fire bench. Burning experiments using the epiradiator showed that live leaves of Phyllostachys sp., Photinia frasei and Prunus laurocerasus had the shortest time-to-ignition and the highest ignition frequency and flaming duration whereas Pittosporum tobira and Nerium oleander were the longest to ignite with a low frequency. Phyllostachys sp. and Nerium oleander litters were the shortest to ignite while Prunus laurocerasus litter had the lowest bulk density and long time-to-ignition, but high flame propagation. Photinia fraseri litter ignited frequently and had a high flame spread while Pittosporum tobira litter ignited the least frequently and for the shortest duration. Cupressus sempervirens litter had the highest bulk density and the longest flaming duration but the lowest flame propagation. Pyracantha coccinea litter was the longest to ignite and flame propagation was low but lasted a long time. Hierarchical cluster analysis performed on the flammability parameters of live leaves and of litters ranked the seven species in four distinct clusters from the most flammable (Prunus laurocerasus and Pyracantha coccinea) to the least flammable (Pittosporum tobira and Nerium oleander); the other species displaying two groups of intermediate flammabilities (Phyllostachys sp.- Photinia fraseri and Cupressus sempervirens ). The species with highly flammable characteristics should not be used in hedges planted in WUIs in South-Eastern France.

Slash and litter weight after clearcut logging in two young-growth timber stands

Treesearch

William E. Sundahl

1966-01-01

Ninety-year-old stands of the Pacific ponderosa pine and Pacific ponderosa pine-Douglas-fir types yielded 53 to 110 tons of slash to the acre after logging on the Challenge Experimental Forest, Yuba County, Calif. Fine slash (under 4 inches d.i.b.) contributed 61 to 64 percent of this weight.

A surface fuel classification for estimating fire effects

Treesearch

Duncan C. Lutes; Robert E. Keane; John F. Caratti

2009-01-01

We present a classification of duff, litter, fine woody debris, and logs that can be used to stratify a project area into sites with fuel loading that yield significantly different emissions and maximum soil surface temperature. Total particulate matter smaller than 2.5?m in diameter and maximum soil surface temperature were simulated using the First...

Fine-Root Ecology Database (FRED): A Global Collection of Root Trait Data with Coincident Site, Vegetation, Edaphic, and Climatic Data, Version 2.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iversen, C.M.; Powell, A.S.; McCormack, M.L.

The second version of the Fine-Root Ecology Database is available for download! Download the full FRED 2.0 data set, user guidance document, map, and list of data sources here. Prior to downloading the data, please read and follow the Data Use Guidelines, and it's worth checking out some tips for using FRED before you begin your analyses. Also, see here for an updating list of corrections to FRED 2.0.

Changes in carbon allocation to aboveground versus belowground forest components is driven by a trade-off involving mycorrhizal fungi, not fine roots

NASA Astrophysics Data System (ADS)

Ouimette, A.; Ollinger, S. V.; Hobbie, E. A.; Lepine, L. C.; Stephens, R.; Rowe, R.; Vadeboncoeur, M. A.; Tumber-Davila, S. J.

2017-12-01

Species composition and resource availability exert a strong influence on the dynamics of carbon allocation among different forest ecosystem components. Recent work in temperate forests has highlighted a tradeoff between carbon allocation to aboveground woody tissues (access to light), and belowground to fine roots (access to soil nutrients). Although root-associated mycorrhizal fungi are crucial for N acquisition and can receive 20% or more of annual net primary production, most studies fail to explicitly include carbon allocation to mycorrhizal fungi. In part, this is due to the inherent difficulties in accurately quantifying fungal production. We took several approaches to quantify production of mycorrhizal fungi, including a carbon budget approach and isotopic techniques. Here we present data on patterns of carbon allocation to aboveground (wood and foliar production), and belowground components (production of fine roots and mycorrhizal fungi), across temperate forest stands spanning a range of nitrogen availability and species composition. We found that as the proportion of conifer species decreased, and stand nitrogen availability increased, both the absolute amount and the fraction of net primary production increased for foliage, aboveground wood, and fine roots ("a rising tide lifts all boats"). While allocation to plant pools increased, allocation to mycorrhizal fungi significantly decreased with decreasing conifer dominance and increasing soil nitrogen availability. We did not find a strong trade-off between carbon allocation to fine roots and aboveground wood or foliage. Instead, a negative relationship is seen between allocation to mycorrhizal fungi and other plant pools. Effort to estimate carbon allocation to mycorrhizal fungi is important for gaining a more complete understanding of how ecosystems respond to changes in growth-limiting resources.

Spatial distribution of Eucalyptus roots in a deep sandy soil in the Congo: relationships with the ability of the stand to take up water and nutrients.

PubMed

Laclau, J P; Arnaud, M; Bouillet, J P; Ranger, J

2001-02-01

Spatial statistical analyses were performed to describe root distribution and changes in soil strength in a mature clonal plantation of Eucalyptus spp. in the Congo. The objective was to analyze spatial variability in root distribution. Relationships between root distribution, soil strength and the water and nutrient uptake by the stand were also investigated. We studied three, 2.35-m-wide, vertical soil profiles perpendicular to the planting row and at various distances from a representative tree. The soil profiles were divided into 25-cm2 grid cells and the number of roots in each of three diameter classes counted in each grid cell. Two profiles were 2-m deep and the third profile was 5-m deep. There was both vertical and horizontal anisotropy in the distribution of fine roots in the three profiles, with root density decreasing sharply with depth and increasing with distance from the stump. Roots were present in areas with high soil strength values (> 6,000 kPa). There was a close relationship between soil water content and soil strength in this sandy soil. Soil strength increased during the dry season mainly because of water uptake by fine roots. There were large areas with low root density, even in the topsoil. Below a depth of 3 m, fine roots were spatially concentrated and most of the soil volume was not explored by roots. This suggests the presence of drainage channels, resulting from the severe hydrophobicity of the upper soil.

Linking Belowground Plant Traits With Ecosystem Processes: A Multi-Biome Perspective

NASA Astrophysics Data System (ADS)

Iversen, C. M.; Norby, R. J.; Childs, J.; McCormack, M. L.; Walker, A. P.; Hanson, P. J.; Warren, J.; Sloan, V. L.; Sullivan, P. F.; Wullschleger, S.; Powell, A. S.

2015-12-01

Fine plant roots are short-lived, narrow-diameter roots that play an important role in ecosystem carbon, water, and nutrient cycling in biomes ranging from the tundra to the tropics. Root ecologists make measurements at a millimeter scale to answer a question with global implications: In response to a changing climate, how do fine roots modulate the exchange of carbon between soils and the atmosphere and how will this response affect our future climate? In a Free-Air CO2 Enrichment experiment in Oak Ridge, TN, elevated [CO2] caused fine roots to dive deeper into the soil profile in search of limiting nitrogen, which led to increased soil C storage in deep soils. In contrast, the fine roots of trees and shrubs in an ombrotrophic bog are constrained to nutrient-poor, oxic soils above the average summer water table depth, though this may change with warmer, drier conditions. Tundra plant species are similarly constrained to surface organic soils by permafrost or waterlogged soils, but have many adaptations that alter ecosystem C fluxes, including aerenchyma that oxygenate the rhizosphere but also allow direct methane flux to the atmosphere. FRED, a global root trait database, will allow terrestrial biosphere models to represent the complexity of root traits across the globe, informing both model representation of ecosystem C and nutrient fluxes, but also the gaps where measurements are needed on plant-soil interactions (for example, in the tropical biome). While the complexity of mm-scale measurements may never have a place in large-scale global models, close collaboration between empiricists and modelers can help to guide the scaling of important, yet small-scale, processes to quantify their important roles in larger-scale ecosystem fluxes.

Different Phylogenetic and Environmental Controls of First-order Root Morphological and Chemical Traits

NASA Astrophysics Data System (ADS)

Wang, R.; Wang, Q.; Zhao, N.; Yu, G.; He, N.

2017-12-01

Fine roots are the most distal roots that act as the primary belowground organs in acquiring limiting nutrients and water from the soil. However, limited by the inconsistency in definitions of fine roots and the different protocols among studies, knowledge of root system traits has, to date, still lagged far behind our understanding of above-ground traits. In particular, whether variation in fine root traits among the plant species along a single root economics spectrum and this underlying mechanism are still hotly debated. In this study, we sampled the first-order root using the standardized protocols, and measured six important root traits related to resource use strategies, from 181 plant species from subtropical to boreal forests. Base on this large dataset, we concluded that different phylogenetic and environmental factors affected on root thickness and nutrient, resulting in the decoupled pattern between them. Specifically, variation in species-level traits related to root thickness (including root diameter, RD and specific root length, SRL) was restricted by common ancestry and little plastic to the changing environments, whereas the large-scale variation in woody root nutrient was mainly controlled by environmental differences, especially soil variables. For community-level traits, mean annual temperature (MAT) mainly influenced the community-level root thickness through the direct effect of changes in plant species composition, while soil P had a positive influence effect on community-level root nitrogen concentration (CWM_RN), reflecting the strong influence of soil fertility on belowground root nutrient. The different environmental constraints and selective pressures acting between root thickness and nutrient traits allows for multiple ecological strategies to adapt to complex environmental conditions. In addition, strong relationships between community-level root traits and environmental variables, due to environmental filters, indicate that in contrast with individual species-level trait, community-aggregated root traits could be used to improve our ability to predict how the distribution of vegetation will change in response to a changing climate.

Lignin signatures show the effects of changes in heather and bracken cover on the composition of organic matter in a moorland soil profile.

PubMed

Hetherington, S L; Anderson, J M

1998-11-01

Bracken (Pteridium aquilinum) is aggressively displacing heather (Calluna vulgaris) on many moorlands in Britain. We investigated the use of lignin derivatives to identify the distribution of soil organic matter (SOM) derived from bracken in moorland soil profiles formed under heather. Phenylpropanoids extracted from recently senesced litters, roots and SOM, using alkaline CuO oxidation, showed distinct signatures for bracken and heather, with vanillyl moieties dominating bracken litter extracts and vanillyl and syringyl dominating heather litter extracts. Ratios of vanillyl and syringyl concentrations characterised the SOM derived from heather and bracken better than the concentrations of the individual moieties. The analysis showed up to a depth of 5 cm under pure bracken cover, and at the interface between heather and bracken, the SOM was largely derived from bracken litter but below that depth SOM was apparently derived from heather. The use of these methods to identify the plant origin of SOM not only enables understanding the effects of changing vegetation cover on organic matter dynamics in moorland soils but could also facilitate management techniques in moorland/heathland restoration which involve the removal of comparatively nutrient-rich SOM derived from bracken.

Fine root dynamics in a developing Populus deltoides plantation

Treesearch

Christel C. Kern; Jane M.-F. Johnson; Mark D. Coleman

2004-01-01

A closely spaced (1 x 1 m) cottonwood (Populus deltoides Bartr.) plantation was established to evaluate the effects of nutrient availability on fine root dynamics. Slow-release fertilizer (17:6:12 N,P,K plus micronutrients) was applied to 225-m2 plots at 0,50,10O and 200 kg N ha-1, and plots were...

Fine root dynamics in a developing Populus deltoides plantation

Treesearch

Christel C. Kern; Alexander L. Friend; Jane M. Johnson; Mark D. Coleman

2004-01-01

A closely spaced (1 x 1 m) cottonwood (Populus deltoides Bartr.) platation was established to evaluate the effects of nutrient availability on fine root dynamics. Slow-release fertilizer (17:6:12 N,P,K plus micronutrients) was applied to 225-m2 plots at 0, 50, 100, 200 kg N ha-1, and plots were monitored...

Influences of calcium availability and tree species on Ca isotope fractionation in soil and vegetation

USGS Publications Warehouse

Page, B.D.; Bullen, T.D.; Mitchell, M.J.

2008-01-01

The calcium (Ca) isotope system is potentially of great use for understanding biogeochemical processes at multiple scales in forest ecosystems, yet remains largely unexplored for this purpose. In order to further our understanding of Ca behavior in forests, we examined two nearly adjacent hardwood-dominated catchments with differing soil Ca concentrations, developed from crystalline bedrock, to determine the variability of 44Ca/ 40Ca ratios (expressed as ??44Ca) within soil and vegetation pools. For both sugar maple and American beech, the Ca isotope compositions of the measured roots and calculated bulk trees were considerably lighter than those of soil pools at these sites, suggesting that the trees were able to preferentially take up light Ca at the root-soil interface. The Ca isotope compositions of three of four root samples were among the lightest values yet reported for terrestrial materials (??44Ca ???-3.95???). Our results further indicate that Ca isotopes were fractionated along the transpiration streams of both tree species with roots having the least ??44Ca values and leaf litter the greatest. An approximately 2??? difference in ??44Ca values between roots and leaf litter of both tree species suggests a persistent fractionation mechanism along the transpiration stream, likely related to Ca binding in wood tissue coupled with internal ion exchange. Finally, our data indicate that differing tree species demand for Ca and soil Ca concentrations together may influence Ca isotope distribution within the trees. Inter-catchment differences in Ca isotope distributions in soils and trees were minor, indicating that the results of our study may have broad transferability to studies of forest ecosystems in catchments developed on crystalline substrates elsewhere. ?? 2008 Springer Science+Business Media B.V.

Phosphorus-mobilization ecosystem engineering: the roles of cluster roots and carboxylate exudation in young P-limited ecosystems

PubMed Central

Lambers, Hans; Bishop, John G.; Hopper, Stephen D.; Laliberté, Etienne; Zúñiga-Feest, Alejandra

2012-01-01

Background Carboxylate-releasing cluster roots of Proteaceae play a key role in acquiring phosphorus (P) from ancient nutrient-impoverished soils in Australia. However, cluster roots are also found in Proteaceae on young, P-rich soils in Chile where they allow P acquisition from soils that strongly sorb P. Scope Unlike Proteaceae in Australia that tend to proficiently remobilize P from senescent leaves, Chilean Proteaceae produce leaf litter rich in P. Consequently, they may act as ecosystem engineers, providing P for plants without specialized roots to access sorbed P. We propose a similar ecosystem-engineering role for species that release large amounts of carboxylates in other relatively young, strongly P-sorbing substrates, e.g. young acidic volcanic deposits and calcareous dunes. Many of these species also fix atmospheric nitrogen and release nutrient-rich litter, but their role as ecosystem engineers is commonly ascribed only to their diazotrophic nature. Conclusions We propose that the P-mobilizing capacity of Proteaceae on young soils, which contain an abundance of P, but where P is poorly available, in combination with inefficient nutrient remobilization from senescing leaves allows these species to function as ecosystem engineers. We suggest that diazotrophic species that colonize young soils with strong P-sorption potential should be considered for their positive effect on P availability, as well as their widely accepted role in nitrogen fixation. Their P-mobilizing activity possibly also enhances their nitrogen-fixing capacity. These diazotrophic species may therefore facilitate the establishment and growth of species with less-efficient P-uptake strategies on more-developed soils with low P availability through similar mechanisms. We argue that the significance of cluster roots and high carboxylate exudation in the development of young ecosystems is probably far more important than has been envisaged thus far. PMID:22700940

Phosphorus-mobilization ecosystem engineering: the roles of cluster roots and carboxylate exudation in young P-limited ecosystems.

PubMed

Lambers, Hans; Bishop, John G; Hopper, Stephen D; Laliberté, Etienne; Zúñiga-Feest, Alejandra

2012-07-01

Carboxylate-releasing cluster roots of Proteaceae play a key role in acquiring phosphorus (P) from ancient nutrient-impoverished soils in Australia. However, cluster roots are also found in Proteaceae on young, P-rich soils in Chile where they allow P acquisition from soils that strongly sorb P. Unlike Proteaceae in Australia that tend to proficiently remobilize P from senescent leaves, Chilean Proteaceae produce leaf litter rich in P. Consequently, they may act as ecosystem engineers, providing P for plants without specialized roots to access sorbed P. We propose a similar ecosystem-engineering role for species that release large amounts of carboxylates in other relatively young, strongly P-sorbing substrates, e.g. young acidic volcanic deposits and calcareous dunes. Many of these species also fix atmospheric nitrogen and release nutrient-rich litter, but their role as ecosystem engineers is commonly ascribed only to their diazotrophic nature. We propose that the P-mobilizing capacity of Proteaceae on young soils, which contain an abundance of P, but where P is poorly available, in combination with inefficient nutrient remobilization from senescing leaves allows these species to function as ecosystem engineers. We suggest that diazotrophic species that colonize young soils with strong P-sorption potential should be considered for their positive effect on P availability, as well as their widely accepted role in nitrogen fixation. Their P-mobilizing activity possibly also enhances their nitrogen-fixing capacity. These diazotrophic species may therefore facilitate the establishment and growth of species with less-efficient P-uptake strategies on more-developed soils with low P availability through similar mechanisms. We argue that the significance of cluster roots and high carboxylate exudation in the development of young ecosystems is probably far more important than has been envisaged thus far.

Control of Boreal Forest Soil Microbial Communities and Processes by Plant Secondary Compounds

NASA Astrophysics Data System (ADS)

Leewis, M. C.; Leigh, M. B.

2016-12-01

Plants release an array of secondary plant metabolites (SPMEs), which vary widely between plant species/progenies and may drive shifts in soil microbial community structure and function. We hypothesize that SPMEs released through litterfall and root turnover in the boreal forest control ecosystem carbon cycling by inhibiting microbial decomposition processes, which are overcome partially by increased aromatic biodegradation of microbial communities that also fortuitously prime soils for accelerated biodegradation of contaminants. Soils and litter (stems, roots, senescing leaves) were collected from 3 different birch progenies from Iceland, Finland, and Siberia that have been reported to contain different SPME content (low, medium, high, respectively) due to differences in herbivory pressure over their natural history, as well as black spruce, all growing in a long-term common tree garden at the Kevo Subarctic Field Research Institute, Finland. We characterized the SPME content of these plant progenies and used a variety of traditional microbiological techniques (e.g., enzyme assays, litter decomposition and contaminant biodegradation rates) and molecular techniques (e.g., high-throughput amplicon sequencing for bacteria and fungi) to assess how different levels of SPMEs may correlate to shifts in microbial community structure and function. Microbial communities (bacterial and fungal) significantly varied in composition as well as leaf litter and diesel biodegradation rates, in accordance with the phytochemistry of the trees present. This study offers novel, fundamental information about phytochemical controls on ecosystem processes, resilience to contaminants, and microbial decomposition processes.

Root production, distribution, and turnover in conventional and organic northern highbush blueberry systems

USDA-ARS?s Scientific Manuscript database

Northern highbush blueberry is a shallow-rooted crop with very fine, fibrous roots. Recently, we installed minirhizotrons (root observation tubes) in a conventional and an organic blueberry planting in western Oregon. We wanted to know exactly when and where new roots were being produced and determi...

Root production, distribution, and turnover in conventional and organic northern highbush blueberry systems

USDA-ARS?s Scientific Manuscript database

Northern highbush blueberry (Vaccinium corymbosum L.) is a shallow-rooted crop with very fine, fibrous roots. Recently, we installed minirhizotrons (root observation tubes) in a conventional and an organic blueberry planting in western Oregon. We wanted to know exactly when and where new roots were ...

[C, N and P stoichiometric characteristics of different root orders for three dominant tree species in subalpine forests of western Sichuan, China].

PubMed

Tang, Shi-shan; Yang, Wan-qin; Xiong, Li; Yin, Rui; Wang, Hai-peng; Zhang, Yan; Xu, Zhen-feng

2015-02-01

Fine root order was classified according to Pregitzer's method. This study measured carbon (C), nitrogen (N) and phosphorus (P) concentrations of the 1-5 root orders (diameter < 2 mm) in three dominant subalpine tree species (Betula albosinensis, Abies faxoniana and Picea asperata) of western Sichuan. Their stoichiometric ratios of different root orders were also calculated. The results showed that C concentration, C/N and C/P increased, but N and P concentrations decreased from the first to fifth order of fine root for all tree species. No significant changes in N/P among root orders were detected in each species. There were significant differences in C, N, P concentrations and their stoichiometric ratios among the tree species. The species-associated differences were dependent on root order. There were significant correlations between C, N, P concentrations and their stoichiometric ratios in the three tree species.

Runoff phosphorus losses as related to phosphorus source, application method, and application rate on a Piedmont soil.

PubMed

Tarkalson, David D; Mikkelsen, Robert L

2004-01-01

Land application of animal manures and fertilizers has resulted in an increased potential for excessive P losses in runoff to nutrient-sensitive surface waters. The purpose of this research was to measure P losses in runoff from a bare Piedmont soil in the southeastern United States receiving broiler litter or inorganic P fertilizer either incorporated or surface-applied at varying P application rates (inorganic P, 0-110 kg P ha(-1); broiler litter, 0-82 kg P ha(-1)). Rainfall simulation was applied at a rate of 76 mm h(-1). Runoff samples were collected at 5-min intervals for 30 min and analyzed for reactive phosphorus (RP), algal-available phosphorus (AAP), and total phosphorus (TP). Incorporation of both P sources resulted in P losses not significantly different than the unfertilized control at all application rates. Incorporation of broiler litter decreased flow-weighted concentration of RP in runoff by 97% and mass loss of TP in runoff by 88% compared with surface application. Surface application of broiler litter resulted in runoff containing between 2.3 and 21.8 mg RP L(-1) for application rates of 8 to 82 kg P ha(-1), respectively. Mass loss of TP in runoff from surface-applied broiler litter ranged from 1.3 to 8.5 kg P ha(-1) over the same application rates. Flow-weighted concentrations of RP and mass losses of TP in runoff were not related to application rate when inorganic P fertilizer was applied to the soil surface. Results for this study can be used by P loss assessment tools to fine-tune P source, application rate, and application method site factors, and to estimate extreme-case P loss from cropland receiving broiler litter and inorganic P fertilizers.

Phenophases alter the soil respiration-temperature relationship in an oak-dominated forest

Treesearch

Jared L. DeForest; Askoo Noormets; Steve G. McNulty; Ge Sun; Gwen Teeney; Jiquan Chen

2006-01-01

Soil respiration (SR) represents a major component of forest ecosystem respiration and is influenced seasonally by environmental factors such as temperature, soil moisture, root respiration, and litter fall. Changes in these environmental factors correspond with shifts in plant phenology. In this study, we examined the relationship between canopy phenophases @re-growth...

Inhibition of seedling survival under Rhodendron maximum (Ericaceae): could allelopathy be a cause?

Treesearch

Erik T. Nilsen; John F. Walker; Orson K. Miller; Shawn W. Semones; Thomas T. Lei; Barton D. Clinton

1999-01-01

In the Southern Appalachian Mountains a subcanopy species, Rhododendron maximum, inhibits the establishment and survival of canopy tree seedlings. One of the mechanisms by which seedlings could be inhibited is an allelopathic effect of decomposing litter or leachate from the canopy of R. maximum (R.m.) on seed germination, root...

Ecosystem processes related to wood decay

Treesearch

Bruce G. Marcot

2017-01-01

Wood decay elements include snags, down wood, root wads, tree stumps, litter, duff, broomed or diseased branches, and partially dead trees, all of which contribute to ecological processes and biodiversity of the forest ecosystem. Down wood can serve as reservoirs for moisture and mycorrhizal fungi beneficial to the health and growth of commercial tree species. Decaying...

[Effects of broadleaf plantation and Chinese fir (Cunninghamia lanceolata) plantation on soil carbon and nitrogen pools].

PubMed

Wan, Xiao-Hua; Huang, Zhi-Qun; He, Zong-Ming; Hu, Zhen-Hong; Yang, Jing-Yu; Yu, Zai-Peng; Wang, Min-huang

2013-02-01

A comparative study was conducted on the soil C and N pools in a 19-year-old broadleaf plantation and a Chinese fir (Cunninghamia lanceolata) plantation in subtropical China, aimed to understand the effects of tree species on the soil C and N pools. In the broadleaf plantation, the C and N stocks in 0-40 cm soil layer were 99.41 Mg.hm-2 and 6. 18 Mg.hm-2, being 33.1 % and 22. 6 % larger than those in Chinese fir plantation, respectively. The standing biomass and the C and N stocks of forest floor in the broadleaf plantation were 1.60, 1.49, and 1.52 times of those in Chinese fir plantation, respectively, and the differences were statistically significant. There was a significant negative relationship between the forest floor C/N ratio and the soil C and N stocks. In the broadleaf plantation, the fine root biomass in 0-80 cm soil layer was 1.28 times of that in the Chinese fir plantation, and the fine root biomass in 0-10 cm soil layer accounted for 48. 2 % of the total fine root biomass. The C and N stocks in the fine roots in the broadleaf plantation were also higher than those in the Chinese fir plantation. In 0-10 cm soil layer, its C stock had a significant positive relationship with the fine root C stock. It was suggested that as compared with Chinese fir plantation, the soil in broadleaf plantation had a greater potential to accumulate organic carbon.

Role of Reactive Mn Complexes in a Litter Decomposition Model System

NASA Astrophysics Data System (ADS)

Nico, P. S.; Keiluweit, M.; Bougoure, J.; Kleber, M.; Summering, J. A.; Maynard, J. J.; Johnson, M.; Pett-Ridge, J.

2012-12-01

The search for controls on litter decomposition rates and pathways has yet to return definitive characteristics that are both statistically robust and can be understood as part of a mechanistic or numerical model. Herein we focus on Mn, an element present in all litter that is likely an active chemical agent of decomposition. Berg and co-workers (2010) found a strong correlation between Mn concentration in litter and the magnitude of litter degradation in boreal forests, suggesting that litter decomposition proceeds more efficiently in the presence of Mn. Although there is much circumstantial evidence for the potential role of Mn in lignin decomposition, few reports exist on mechanistic details of this process. For the current work, we are guided by the hypothesis that the dependence of decomposition on Mn is due to Mn (III)-oxalate complexes act as a 'pretreatment' for structurally intact ligno-carbohydrate complexes (LCC) in fresh plant cell walls (e.g. in litter, root and wood). Manganese (III)-ligand complexes such as Mn (III)-oxalate are known to be potent oxidizers of many different organic and inorganic compounds. In the litter system, the unique property of these complexes may be that they are much smaller than exo-enzymes and therefore more easily able to penetrate LCC complexes in plant cell walls. By acting as 'diffusible oxidizers' and reacting with the organic matrix of the cell wall, these compounds can increase the porosity of fresh litter thereby facilitating access of more specific lignin- and cellulose decomposing enzymes. This possibility was investigated by reacting cell walls of single Zinnia elegans tracheary elements with Mn (III)-oxalate complexes in a continuous flow reactor. The uniformity of these individual plant cells allowed us to examine Mn (III)-induced changes in cell wall chemistry and ultrastructure on the micro-scale using fluorescence and electron microscopy as well as IR and X-ray spectromicroscopy. This presentation will discuss the chemical changes induced by reaction of Mn (III)-complexes with the Zinnia cells, the impact of such reactions on cell integrity, and potential implications for soil C cycling.

EFFECTS OF ELEVATED CO2 AND N-FERTILIZATION ON SURVIVAL OF PONDEROSA PINE FINE ROOTS

EPA Science Inventory

We used minihizaotrons to assess the effects of elevated CO2N and season on the life-span of ponderosa pine (Pinus ponderosa Dougl. Ex Laws.) fine roots. CO2 levels were ambient air (A), ambient air + 175 ?mol mol-1 (A+175) and ambient air + 350 ?mol mol-1 (A+350). N treatments ...

EFFECTS OF ELEVATED CO-2 AND N FERTILIZATION ON FINE ROOT DYNAMICS AND FUNGAL GROWTH IN SEEDLING PINUS PONDEROSA

EPA Science Inventory

The effects of elevated CO-2 and N fertilization on fine root growth of Pinus ponderosa Dougl. ex P. Laws. C. Laws., grown in native soil in open-top field-exposure chambers at Placerville, CA, were monitored for a 2-year period using minirhizotrons. The experimental design was a...

The Five-Year Fate of a 15N Tracer in a Mixed Deciduous Forest: Retention, Redistribution, and Differences by Mycorrhizal Association

NASA Astrophysics Data System (ADS)

Goodale, C. L.

2015-12-01

The impact of nitrogen deposition on forest ecosystems depends in large part on its fate: uptake by trees can stimulate growth, while gaseous or leaching losses contribute to air and water pollution and represent the loss of a limiting nutrient. Past tracer studies have shown that soils dominate the short-term fate of added 15N, but its longer-term term fate remains uncertain. This study examined how much 15N tracer moved plant or soil pools or was lost over 5-6 years. In 2007, a 15N tracer (0.21 kg/ha as 99% enriched 15N-KNO3) was added to 0.25 ha mixed hardwood forest in central NY. All of the tracer was recovered in the days after its addition, but recovery fell to 78% by the end of this year (25% surface litter, 48% 0-10 cm soil, 5% roots). One year later, recovery in these pools fell (to 51%), with losses from surface litter (-11%) and the 0-10 cm soils (-15%), including losses from the "heavy" soil fraction. Additional tracer moved to other plant pools (+5%) and to deeper soil (+13%; up to 30 cm), for a total recovery of 69% of the added tracer. Between years 1 and 5-6, only total tracer recovery decreased by only 1.4%. Recovery decreased in foliage (-0.2%), all roots (-3.5%), and surface litter (-9.8%), while increasing in woody biomass (+0.9%), 0-10 cm soil (+8.9%), and deep soil (+2.3%; up to 50 cm). Tracer recovery in live and dead plant N pools (11%) did not change, as 3% moved from roots into aboveground plant tissues and 3% moved from live plant pools into leaf litter; these results imply no net transfer of 15N from soil to plants during this period. Over all 5-6 years, only 1.6% of the tracer moved into bark or wood, a small but important sink because of its high C:N ratio; however, roughly one-third of this total was in wood formed prior to the start of the tracer addition. Tree species differed in their recovery of 15N: the six species with ectomycorrhizal associations showed more enrichment than the four species with arbuscular mycorrhizae. It is not yet apparent whether ectomycorrhizal species were more effective at scavenging 15N at the time of tracer addition, or if they were better at acquiring 15N from its initial fate in litter and soil. Only continued long-term resampling can distinguish between these alternatives, and to what extent 15N initially retained in soil eventually moves into plants over decadal timescales.

Impacts of afforestation and silviculture on the soil C balance of tropical tree plantations: belowground C allocation, soil CO2 efflux and C accretion (Invited)

NASA Astrophysics Data System (ADS)

Epron, D.; Koutika, L.; Mareschal, L.; Nouvellon, Y.

2013-12-01

Tropical forest plantations will provide a large part of the global wood supply which is anticipated to increase sharply in the next decades, becoming a valuable source of income in many countries, where they also contribute to land use changes that impact the global carbon (C) cycle. Tropical forest plantations established on previous grasslands are potential C sinks offsetting anthropogenic CO2 emissions. When they are managed on short rotations, the aboveground biomass is frequently removed and transformed into wood products with short lifetimes. The soil is thus the only compartment for durable C sequestration. The soil C budget results from the inputs of C from litterfall, root turnover and residues left at logging stage, balanced by C losses through heterotrophic respiration and leaching of organic C with water flow. Intensive researches have been conducted these last ten years in eucalypt plantations in the Congo on the effects of management options on soil fertility improvement and C sequestration. Our aim is to review important results regarding belowground C allocation, soil CO2 efflux and C accretion in relation to management options. We will specifically address (i) the soil C dynamics after afforestation of a tropical savannah, (ii) the impact of post-harvest residue management, and (iii) the beneficial effect of introducing nitrogen fixing species for C sequestration. Our results on afforestation of previous savannah showed that mechanical soil disturbance for site preparation had no effect on soil CO2 efflux and soil C balance. Soil C increased after afforestation despite a rapid disappearance of the labile savannah-derived C because a large fraction of savannah-derived C is stable and the aboveground litter layer is as the major source of CO2 contributing to soil CO2 efflux. We further demonstrated that the C stock in and on the soil slightly increased after each rotation when large amounts of residues are left at logging stage and that most of eucalypt-derived C is recovered in the fine particulate organic matter fraction (0.25-0.05 mm) and the organo-mineral fraction (< 0.05 mm). While the early tree growth is related to the heterotrophic component of soil CO2 efflux, thus largely dependent on the nutrients released by the decomposition of organic residues left at harvest, the stabilization of the old soil organic C derived from the savannah may depends on the amount of organic residues left at harvest. A greater C accumulation was observed in the soil when eucalypts were grown in mixture with a nitrogen fixing tree despite similar aboveground litter fall and lower fine root biomass. A slowdown of C turnover related to N enrichment might thus be postulated in nitrogen-poor tropical soils, and mixed-species plantation with nitrogen fixing trees might be an important strategy of reforestation or afforestation to offset C emissions.

The influence of fuelbed properties on moisture drying rates and timelags of longleaf pine litter

Treesearch

Ralph M. Nelson; J. Kevin Hiers

2008-01-01

Fire managers often model pine needles as 1 h timelag fuels, but fuelbed properties may significantly change the rate at which needles exchange moisture with the atmosphere. The problem of determining whether moisture loss from fine fuels is being controlled by individual particles or by the fuelbed remains unresolved. Results from this laboratory experiment indicate...

Reliability of biomass burning estimates from savanna fires: Biomass burning in northern Australia during the 1999 Biomass Burning and Lightning Experiment B field campaign

NASA Astrophysics Data System (ADS)

Russell-Smith, Jeremy; Edwards, Andrew C.; Cook, Garry D.

2003-02-01

This paper estimates the two-daily extent of savanna burning and consumption of fine (grass and litter) fuels from an extensive 230,000 km2 region of northern Australia during August-September 1999 encompassing the Australian continental component of the Biomass Burning and Lightning Experiment B (BIBLE B) campaign [, 2002]. The extent of burning for the study region was derived from fire scar mapping of imagery from the advanced very high resolution radiometer (AVHRR) on board the National Oceanic and Atmospheric Administration (NOAA) satellite. The mapping was calibrated and verified with reference to one Landsat scene and associated aerial transect validation data. Fine fuel loads were estimated using published fuel accumulation relationships for major regional fuel types. It is estimated that more than 43,000 km2 was burnt during the 25 day study period, with about 19 Mt of fine (grass and litter) fuels. This paper examines assumptions and errors associated with these estimates. It is estimated from uncalibrated fire mapping derived from AVHRR imagery that 417,500 km2 of the northern Australian savanna was burnt in 1999, of which 136,405 km2, or 30%, occurred in the Northern Territory study region. Using generalized fuel accumulation equations, such biomass burning consumed an estimated 212.3 Mt of fine fuels, but no data are available for consumption of coarse fuels. This figure exceeds a recent estimate, based on fine fuels only, for the combined Australian savanna and temperate grassland biomass burning over the period 1990-1999 but is lower than past estimates derived from classification approaches. We conclude that (1) fire maps derived from coarse-resolution optical imagery can be applied relatively reliably to estimate the extent of savanna fires, generally with 70-80% confidence using the approach adopted here, over the major burning period in northern Australia and (2) substantial further field assessment and associated modeling of fuel accumulation, especially of coarse fuels, is required.

Refining the cheatgrass-fire cycle in the Great Basin: Precipitation timing and fine fuel composition predict wildfire trends.

PubMed

Pilliod, David S; Welty, Justin L; Arkle, Robert S

2017-10-01

Larger, more frequent wildfires in arid and semi-arid ecosystems have been associated with invasion by non-native annual grasses, yet a complete understanding of fine fuel development and subsequent wildfire trends is lacking. We investigated the complex relationships among weather, fine fuels, and fire in the Great Basin, USA. We first modeled the annual and time-lagged effects of precipitation and temperature on herbaceous vegetation cover and litter accumulation over a 26-year period in the northern Great Basin. We then modeled how these fine fuels and weather patterns influence subsequent wildfires. We found that cheatgrass cover increased in years with higher precipitation and especially when one of the previous 3 years also was particularly wet. Cover of non-native forbs and native herbs also increased in wet years, but only after several dry years. The area burned by wildfire in a given year was mostly associated with native herb and non-native forb cover, whereas cheatgrass mainly influenced area burned in the form of litter derived from previous years' growth. Consequently, multiyear weather patterns, including precipitation in the previous 1-3 years, was a strong predictor of wildfire in a given year because of the time needed to develop these fine fuel loads. The strong relationship between precipitation and wildfire allowed us to expand our inference to 10,162 wildfires across the entire Great Basin over a 35-year period from 1980 to 2014. Our results suggest that the region's precipitation pattern of consecutive wet years followed by consecutive dry years results in a cycle of fuel accumulation followed by weather conditions that increase the probability of wildfire events in the year when the cycle transitions from wet to dry. These patterns varied regionally but were strong enough to allow us to model annual wildfire risk across the Great Basin based on precipitation alone.

Differentiating the sources of fine sediment, organic matter and nitrogen in a subtropical Australian catchment.

PubMed

Garzon-Garcia, Alexandra; Laceby, J Patrick; Olley, Jon M; Bunn, Stuart E

2017-01-01

Understanding the sources of sediment, organic matter and nitrogen (N) transferred from terrestrial to aquatic environments is important for managing the deleterious off-site impacts of soil erosion. In particular, investigating the sources of organic matter associated with fine sediment may also provide insight into carbon (C) and N budgets. Accordingly, the main sources of fine sediment, organic matter (indicated by total organic carbon), and N are determined for three nested catchments (2.5km 2 , 75km 2 , and 3076km 2 ) in subtropical Australia. Source samples included subsoil and surface soil, along with C 3 and C 4 vegetation. All samples were analysed for stable isotopes (δ 13 C, δ 15 N) and elemental composition (TOC, TN). A stable isotope mixing model (SIAR) was used to determine relative source contributions for different spatial scales (nested catchments), climatic conditions and flow stages. Subsoil was the main source of fine sediment for all catchments (82%, SD=1.15) and the main N source at smaller scales (55-76%, SD=4.6-10.5), with an exception for the wet year and at the larger catchment, where surface soil was the dominant N source (55-61%, SD=3.6-9.9), though contributions were dependent on flow (59-680m 3 /s). C 3 litter was the main source of organic C export for the two larger catchments (53%, SD=3.8) even though C 4 grasses dominate the vegetation cover in these catchments. The sources of fine sediment, organic matter and N differ in subtropical catchments impacted by erosion, with the majority of C derived from C 3 leaf litter and the majority of N derived from either subsoil or surface soil. Understanding these differences will assist management in reducing sediment, organic matter and N transfers in similar subtropical catchments while providing a quantitative foundation for testing C and N budgets. Copyright © 2016 Elsevier B.V. All rights reserved.

Refining the cheatgrass–fire cycle in the Great Basin: Precipitation timing and fine fuel composition predict wildfire trends

USGS Publications Warehouse

Pilliod, David S.; Welty, Justin; Arkle, Robert

2017-01-01

Larger, more frequent wildfires in arid and semi-arid ecosystems have been associated with invasion by non-native annual grasses, yet a complete understanding of fine fuel development and subsequent wildfire trends is lacking. We investigated the complex relationships among weather, fine fuels, and fire in the Great Basin, USA. We first modeled the annual and time-lagged effects of precipitation and temperature on herbaceous vegetation cover and litter accumulation over a 26-year period in the northern Great Basin. We then modeled how these fine fuels and weather patterns influence subsequent wildfires. We found that cheatgrass cover increased in years with higher precipitation and especially when one of the previous 3 years also was particularly wet. Cover of non-native forbs and native herbs also increased in wet years, but only after several dry years. The area burned by wildfire in a given year was mostly associated with native herb and non-native forb cover, whereas cheatgrass mainly influenced area burned in the form of litter derived from previous years’ growth. Consequently, multiyear weather patterns, including precipitation in the previous 1–3 years, was a strong predictor of wildfire in a given year because of the time needed to develop these fine fuel loads. The strong relationship between precipitation and wildfire allowed us to expand our inference to 10,162 wildfires across the entire Great Basin over a 35-year period from 1980 to 2014. Our results suggest that the region's precipitation pattern of consecutive wet years followed by consecutive dry years results in a cycle of fuel accumulation followed by weather conditions that increase the probability of wildfire events in the year when the cycle transitions from wet to dry. These patterns varied regionally but were strong enough to allow us to model annual wildfire risk across the Great Basin based on precipitation alone.

Long-term nitrogen addition leads to loss of species richness due to litter accumulation and soil acidification in a temperate steppe.

PubMed

Fang, Ying; Xun, Fen; Bai, Wenming; Zhang, Wenhao; Li, Linghao

2012-01-01

Although community structure and species richness are known to respond to nitrogen fertilization dramatically, little is known about the mechanisms underlying specific species replacement and richness loss. In an experiment in semiarid temperate steppe of China, manipulative N addition with five treatments was conducted to evaluate the effect of N addition on the community structure and species richness. Species richness and biomass of community in each plot were investigated in a randomly selected quadrat. Root element, available and total phosphorus (AP, TP) in rhizospheric soil, and soil moisture, pH, AP, TP and inorganic N in the soil were measured. The relationship between species richness and the measured factors was analyzed using bivariate correlations and stepwise multiple linear regressions. The two dominant species, a shrub Artemisia frigida and a grass Stipa krylovii, responded differently to N addition such that the former was gradually replaced by the latter. S. krylovii and A. frigida had highly-branched fibrous and un-branched tap root systems, respectively. S. krylovii had higher height than A. frigida in both control and N added plots. These differences may contribute to the observed species replacement. In addition, the analysis on root element and AP contents in rhizospheric soil suggests that different calcium acquisition strategies, and phosphorus and sodium responses of the two species may account for the replacement. Species richness was significantly reduced along the five N addition levels. Our results revealed a significant relationship between species richness and soil pH, litter amount, soil moisture, AP concentration and inorganic N concentration. Our results indicate that litter accumulation and soil acidification accounted for 52.3% and 43.3% of the variation in species richness, respectively. These findings would advance our knowledge on the changes in species richness in semiarid temperate steppe of northern China under N deposition scenario.

Exploitation of nutrient- and C-rich paleosols by deep rooting plants in Dutch drift- and coversands

NASA Astrophysics Data System (ADS)

Gocke, Martina; Kessler, Fabian; van Mourik, Jan; Jansen, Boris; Wiesenberg, Guido L. B.

2015-04-01

Plant roots are commonly assumed to be most abundant in topsoil, with strongly decreasing frequencies in underlying soil horizons with incrasing depth and almost absence of roots below the uppermost few dm due to unfavorable environmental conditions in terms of e.g. aeration, nutrient availability or water, that hamper root growth. It still remains unknown, to which extent roots might be able to exploit deeper parts of soils and underlying soil parent material as well as burried paleosols. The study site is located in SE Netherlands. Undisturbed oak forests developed about 200 years ago on stabilized driftsand, deposited on a plaggic Anthrosol after approximately 700 years of agricultural use. The soil profile, consisting of the recent initial Podzol in driftsand, overlying 1.1 m thick plaggic deposits that were established in a 0.5 m thick residual Podzol in coversand, was excavated in a pit of 2.3 m depth. Living and dead roots were counted throughout the profile on both, the vertical wall and horizontal levels. Additionally, soil or sediment samples free of visible root remains were collected in depth intervals between 0.05 m and 0.15 m from topsoil down to the coversand. A multi-proxy approach, including assessment of bulk elemental composition of soil, sediments and paleosol and molecular structure of organic matter therein, organic carbon contents, bulk density and pH was applied in order to comprehensively describe the varying environmental conditions within the soil profile and in transects from roots to root-free material. The burried agricultural soil revealed low density and high organic carbon contents compared to the coversand parent material, and especially in its lower part, high phosphorous contents. In contrast, the burried Podzol was characterized by completely different geochemical and physical properties, like increasing pH with depth and high iron and aluminium contents. In the recent initial Podzol, fine roots (≤ 2 mm), deriving from both oak trees and understory vegetation, immediately decreased from 476 m-2 to 24 m-2, whereas medium roots (2-5 mm) from oak trees continuously increased from 8 m-2 at the surface to 188 m-2 within the upper part of the agricultural soil. Both, frequencies of fine and medium roots peaked at 4.448 m-2 and 216 m-2, respectively, in the uppermost part of the burried Podzol, thus considerably exceeding topsoil abundances. Comparison of these results with those obtained at the profile wall demonstrated that fine root abundances might be considerably underestimated by the more traditional approach of profile wall investigation, because fine roots were growing vertically to exploit the nutrient-rich burried paleosols. Unlike fine roots, medium roots and even more, large roots (> 5 mm) were not able to penetrate the hard sesquioxide crusts of the burried Podzol in larger numbers. Our results show that roots are able to deeply penetrate the soil and underlying soil parent material or paleosols, if the latter provides nutrition benefits. Root distribution strongly depends on physical and chemical properties of the deep subsoil, which should be taken into account when interpreting complex soil profiles covering recent and paleosols.

Influences of canopy photosynthesis and summer rain pulses on root dynamics and soil respiration in a young ponderosa pine forest.

PubMed

Misson, Laurent; Gershenson, Alexander; Tang, Jianwu; McKay, Megan; Cheng, Weixin; Goldstein, Allen

2006-07-01

Our first objective was to link the seasonality of fine root dynamics with soil respiration in a ponderosa pine (Pinus ponderosa P. & C. Lawson) plantation located in the Sierra Nevada of California. The second objective was to examine how canopy photosynthesis influences fine root initiation, growth and mortality in this ecosystem. We compared CO2 flux measurements with aboveground and belowground root dynamics. Initiation of fine root growth coincided with tree stem thickening and shoot elongation, preceding new needle growth. In the spring, root, shoot and stem growth occurred simultaneously with the increase in canopy photosynthesis. Compared with the other tree components, initial growth rate of fine roots was the highest and their growing period was the shortest. Both above and belowground components completed 90% of their growth by the end of July and the growing season lasted approximately 80 days. The period for optimal growth is short at the study site because of low soil temperatures during winter and low soil water content during summer. High photosynthetic rates were observed following unusual late-summer rains, but tree growth did not resume. The autotrophic contribution to soil respiration was 49% over the whole season, with daily contributions ranging between 18 and 87%. Increases in soil and ecosystem respiration were observed during spring growth; however, the largest variation in soil respiration occurred during summer rain events when no growth was observed. Both the magnitude and persistence of the soil respiration pulses were positively correlated with the amount of rain. These pulses accounted for 16.5% of soil respiration between Days 130 and 329.

Root colonization and spore abundance of arbuscular mycorrhizal fungi in distinct successional stages from an Atlantic rainforest biome in southern Brazil.

PubMed

Zangaro, Waldemar; Rostirola, Leila Vergal; de Souza, Priscila Bochi; de Almeida Alves, Ricardo; Lescano, Luiz Eduardo Azevedo Marques; Rondina, Artur Berbel Lírio; Nogueira, Marco Antonio; Carrenho, Rosilaine

2013-04-01

The influence of plant functional groups and moderate seasonality on arbuscular mycorrhizal (AM) fungal status (root colonization and spore density) was investigated during 13 consecutive months in a chronosequence of succession in southern Brazil, consisting of grassland field, scrub vegetation, secondary forest and mature forest, in a region of transition from tropical to subtropical zones. AM root colonization and spore density decreased with advancing succession and were highest in early successional sites with grassland and scrub vegetation, intermediary in the secondary forest and lowest in the mature forest. They were little influenced by soil properties, but were sufficiently influenced by the fine root nutrient status and fine root traits among different functional plant groups. AM root colonization and spore density were higher during the favourable plant growth season (spring and summer) than during the less favourable plant growth season (autumn and winter). Spore density displayed significant seasonal variation at all sites, whilst root colonization displayed significant seasonal variation in grassland, scrub and secondary forest, but not in mature forest. The data suggest that (1) different plant functional groups display different relationships with AM fungi, influencing their abundance differentially; (2) plant species from early successional phases are more susceptible to AM root colonization and maintain higher AM sporulation than late successional species; (3) fine root traits and nutrient status influence these AM fungal attributes; and (4) higher AM spore production and root colonization is associated with the season of higher light incidence and temperature, abundant water in soil and higher plant metabolic activity.

Allelopathy of Bracken Fern (Pteridium arachnoideum): New Evidence from Green Fronds, Litter, and Soil

PubMed Central

Juliano Gualtieri, Sonia Cristina; Rodrigues-Filho, Edson; Macías, Francisco Antonio

2016-01-01

The neotropical bracken fern Pteridium arachnoideum (Kaulf.) Maxon. (Dennstaedtiaceae) is described as an aggressive pioneer plant species. It invades abandoned or newly burned areas and represents a management challenge at these invaded sites. Native to the Atlantic Forest and Cerrado (Tropical Savanna) Brazilian biomes, P. arachnoideum has nevertheless become very problematic in these conservation hotspots. Despite some reports suggesting a possible role of allelopathy in this plant’s dominance, until now there has been little evidence of isolated and individually identified compounds with phytotoxic activities present in its tissues or in the surrounding environment. Thus, the aim of this study was to investigate the allelopathic potential of P. arachnoideum by isolating and identifying any secondary metabolites with phytotoxic activity in its tissues, litter, and soil. Bioguided phytochemical investigation led to the isolation and identification of the proanthocyanidin selligueain A as the major secondary compound in the green fronds and litter of this fern. It is produced by P. arachnoideum in its green fronds, remains unaltered during the senescence process, and is the major secondary compound present in litter. Selligueain A showed phytotoxic activity against the selected target species sesame (Sesamum indicum) early development. In particular, the compound inhibited root and stem growth, and root metaxylem cell size but did not affect chlorophyll content. This compound can be considered as an allelochemical because it is present in the soil under P. arachnoideum patches as one of the major compounds in the soil solution. This is the first report of the presence of selligueain A in any member of the Dennstaedtiaceae family and the first time an isolated and identified allelochemical produced by members of the Pteridium species complex has been described. This evidence of selligueain A as a putative allelochemical of P. arachnoideum reinforces the role of allelopathy in the dominance processes of this plant in the areas where it occurs. PMID:27552161

Physiological profiling of soil microbial communities in a Florida scrub-oak ecosystem: spatial distribution and nutrient limitations.

PubMed

Brown, Alisha L P; Garland, Jay L; Day, Frank P

2009-01-01

Rapid physiological profiling of heterotrophic microbial communities enables intensive analysis of the factors affecting activity in aerobic habitats, such as soil. Previous methods for performing such profiling were severely limited due to enrichment bias and inflexibility in incubation conditions. We tested a new physiological profiling approach based on a microtiter plate oxygen sensor system (Becton Dickinson Oxygen Biosensor System (BDOBS)), which allows for testing of lower substrate addition (i.e., lower enrichment potential) and manipulation of physiochemical assay conditions, such as pH and nutrients. Soil microbial communities associated with a scrub-oak forest ecosystem on Merritt Island Wildlife Refuge in central Florida, USA, were studied in order to evaluate microbial activity in a nutrient poor soil and to provide baseline data on the site for subsequent evaluation of the effects of elevated CO(2) on ecosystem function. The spatial variation in physiological activity amongst different habitats (litter, bulk soil, and rhizosphere) was examined as a function of adaptation to local resources (i.e., water soluble extracts of roots and leaf litter) and the degree of N and P limitation. All the communities were primarily N-limited, with a secondary P limitation, which was greater in the rhizosphere and bulk soil. The litter community showed greater overall oxygen consumption when exposed to litter extracts relative to the rhizosphere or soil, suggesting acclimation toward greater use of the mixed substrates in the extract. Root extracts were readily used by communities from all the habitats with no habitat specific acclimation observed. A priming effect was detected in all habitats; addition of glucose caused a significant increase in the use of soil organic carbon. Response to added glucose was only observed with N and P addition, suggesting that C may be lost to the groundwater from these porous soils because nutrient limitation prevents C immobilization.

Foraging strategies in trees of different root morphology: the role of root lifespan.

PubMed

Adams, Thomas S; McCormack, M Luke; Eissenstat, David M

2013-09-01

Resource exploitation of patches is influenced not simply by the rate of root production in the patches but also by the lifespan of the roots inhabiting the patches. We examined the effect of sustained localized nitrogen (N) fertilization on root lifespan in four tree species that varied widely in root morphology and presumed foraging strategy. The study was conducted in a 12-year-old common garden in central Pennsylvania using a combination of data from minirhizotron and root in-growth cores. The two fine-root tree species, Acer negundo L. and Populus tremuloides Michx., exhibited significant increases in root lifespan with local N fertilization; no significant responses were observed in the two coarse-root tree species, Sassafras albidum Nutt. and Liriodendron tulipifera L. Across species, coarse-root tree species had longer median root lifespan than fine-root tree species. Localized N fertilization did not significantly increase the N concentration or the respiration of the roots growing in the N-rich patch. Our results suggest that some plant species appear to regulate the lifespan of different portions of their root system to improve resource acquisition while other species do not. Our results are discussed in the context of different strategies of foraging of nutrient patches in species of different root morphology.

Root growth and development in response to CO2 enrichment

NASA Technical Reports Server (NTRS)

Day, Frank P., Jr.

1994-01-01

A non-destructive technique (minirhizotron observation tubes) was used to assess the effects of CO2 enrichment on root growth and development in experimental plots in a scrub oak-palmetto community at the Kennedy Space Center. Potential effects of CO2 enrichment on plants have a global significance in light of concerns over increasing CO2 concentrations in the Earth's atmosphere. The study at Kennedy Space Center focused on aboveground physiological responses (photosynthetic efficiency and water use efficiency), effects on process rates (litter decomposition and nutrient turnover), and belowground responses of the plants. Belowground dynamics are an exceptionally important component of total plant response but are frequently ignored due to methodological difficulties. Most methods used to examine root growth and development are destructive and, therefore, severely compromise results. Minirhizotrons allow nondestructive observation and quantification of the same soil volume and roots through time. Root length density and root phenology were evaluated for CO2 effects with this nondestructive technique.

Linking carbon supply to root cell-wall chemistry and mechanics at high altitudes in Abies georgei

PubMed Central

Genet, Marie; Li, Mingcai; Luo, Tianxiang; Fourcaud, Thierry; Clément-Vidal, Anne; Stokes, Alexia

2011-01-01

Background and Aims The mobile carbon supply to different compartments of a tree is affected by climate, but its impact on cell-wall chemistry and mechanics remains unknown. To understand better the variability in root growth and biomechanics in mountain forests subjected to substrate mass movement, we investigated root chemical and mechanical properties of mature Abies georgei var. smithii (Smith fir) growing at different elevations on the Tibet–Qinghai Plateau. Methods Thin and fine roots (0·1–4·0 mm in diameter) were sampled at three different elevations (3480, 3900 and 4330 m, the last corresponding to the treeline). Tensile resistance of roots of different diameter classes was measured along with holocellulose and non-structural carbon (NSC) content. Key Results The mean force necessary to break roots in tension decreased significantly with increasing altitude and was attributed to a decrease in holocellulose content. Holocellulose was significantly lower in roots at the treeline (29·5 ± 1·3 %) compared with those at 3480 m (39·1 ± 1·0 %). Roots also differed significantly in NSC, with 35·6 ± 4·1 mg g−1 dry mass of mean total soluble sugars in roots at 3480 m and 18·8 ± 2·1 mg g−1 dry mass in roots at the treeline. Conclusions Root mechanical resistance, holocellulose and NSC content all decreased with increasing altitude. Holocellulose is made up principally of cellulose, the biosynthesis of which depends largely on NSC supply. Plants synthesize cellulose when conditions are optimal and NSC is not limiting. Thus, cellulose synthesis in the thin and fine roots measured in our study is probably not a priority in mature trees growing at very high altitudes, where climatic factors will be limiting for growth. Root NSC stocks at the treeline may be depleted through over-demand for carbon supply due to increased fine root production or winter root growth. PMID:21186240

Fine root productivity varies along nitrogen and phosphorus gradients in high-rainfall mangrove forests of Micronesia

USGS Publications Warehouse

Cormier, Nicole; Twilley, Robert R.; Ewel, Katherine C.; Krauss, Ken W.

2015-01-01

Belowground biomass is thought to account for much of the total biomass in mangrove forests and may be related to soil fertility. The Yela River and the Sapwalap River, Federated States of Micronesia, contain a natural soil resource gradient defined by total phosphorus (P) density ranging from 0.05 to 0.42 mg cm−3 in different hydrogeomorphic settings. We used this fertility gradient to test the hypothesis that edaphic conditions constrain mangrove productivity through differential allocation of biomass to belowground roots. We removed sequential cores and implanted root ingrowth bags to measure in situ biomass and productivity, respectively. Belowground root biomass values ranged among sites from 0.448 ± 0.096 to 2.641 ± 0.534 kg m−2. Root productivity (roots ≤20 mm) did not vary significantly along the gradient (P = 0.3355) or with P fertilization after 6 months (P = 0.2968). Fine root productivity (roots ≤2 mm), however, did vary significantly among sites (P = 0.0363) and ranged from 45.88 ± 21.37 to 118.66 ± 38.05 g m−2 year−1. The distribution of total standing root biomass and fine root productivity followed patterns of N:P ratios as hypothesized, with larger root mass generally associated with lower relative P concentrations. Many of the processes of nutrient acquisition reported from nutrient-limited mangrove forests may also occur in forests of greater biomass and productivity when growing along soil nutrient gradients.

The Role of Fine Root Dynamics in the N and P Cycles of Regenerating Upland Oak-Hickory Forests

Treesearch

Travis W. Idol; Phillip E. Pope; Jennifer Tucker; Felix, Jr. Ponder

1998-01-01

ln naturally regenerating hardwood forest stands, inputs of organic matter and nutrients from fine root turnover and decomposition are significant but not well-quantified. Four forest stands in southern Indiana-aged 6, 12, 31, and approximately 100 years since clearcutting at the time of the study-were chosen to represent the different developmental stages of upland...

CO2 AND N-FERTILIZATION EFFECTS ON FINE ROOT LENGTH, PRODUCTION, AND MORTALITY: A 4-YEAR PONDEROSA PINE STUDY

EPA Science Inventory

We conducted a 4-year study of Pinus ponderosa fine root (<2 mm) responses to atmospheric CO2 and N-fertilization. Seedlings were grown in open-top chambers at 3 CO2 levels (ambient, ambient+175 mol/mol, ambient+350 mol/mol) and 3 N-fertilization levels (0, 10, 20 g?m-2?yr-1). ...

Traceable Calibration, Performance Metrics, and Uncertainty Estimates of Minirhizotron Digital Imagery for Fine-Root Measurements

PubMed Central

Roberti, Joshua A.; SanClements, Michael D.; Loescher, Henry W.; Ayres, Edward

2014-01-01

Even though fine-root turnover is a highly studied topic, it is often poorly understood as a result of uncertainties inherent in its sampling, e.g., quantifying spatial and temporal variability. While many methods exist to quantify fine-root turnover, use of minirhizotrons has increased over the last two decades, making sensor errors another source of uncertainty. Currently, no standardized methodology exists to test and compare minirhizotron camera capability, imagery, and performance. This paper presents a reproducible, laboratory-based method by which minirhizotron cameras can be tested and validated in a traceable manner. The performance of camera characteristics was identified and test criteria were developed: we quantified the precision of camera location for successive images, estimated the trueness and precision of each camera's ability to quantify root diameter and root color, and also assessed the influence of heat dissipation introduced by the minirhizotron cameras and electrical components. We report detailed and defensible metrology analyses that examine the performance of two commercially available minirhizotron cameras. These cameras performed differently with regard to the various test criteria and uncertainty analyses. We recommend a defensible metrology approach to quantify the performance of minirhizotron camera characteristics and determine sensor-related measurement uncertainties prior to field use. This approach is also extensible to other digital imagery technologies. In turn, these approaches facilitate a greater understanding of measurement uncertainties (signal-to-noise ratio) inherent in the camera performance and allow such uncertainties to be quantified and mitigated so that estimates of fine-root turnover can be more confidently quantified. PMID:25391023

Fertilization, weed control, and pine litter influence loblolly pine stem productivity and root development

Treesearch

James D. Haywood; Allan E. Tiarks; Mary A. Sword

1997-01-01

Following site preparation, three cultural treatments and three open-pollinated loblolly pine (Pinus taeda L.) families were studied on a gently sloping Beauregard silt loam in central Louisiana. The treatments were: (1) fertilization (either broadcast application of 177 kg N and 151 kg P/ha or none); (2) herbicide application (either broadcast...

REFINING THE DUAL ISOTOPE APPROACH TO DETERMINE FIELD ESTIMATES OF LITTER, ROOT, AND SOM COMPONENTS OF SOIL CO2 EFFLUX

EPA Science Inventory

Stable isotopes have become an important tool for determining the relative importance of CO2 sources and sinks contributing to the global carbon budget. Of particular importance is the determination of the terrestrial CO2 flux which is difficult to decipher without determining t...

Fertilization, weed control, and pine litter influence loblolly pine stem productivity and root development

Treesearch

James D. Haywood; Allan E. Tiarks; Mark A. Sword

1997-01-01

Development of forest plantations may be delayed or yield expectations curtailed by interference from competing vegetation. Competing vegetation can be controlled with herbicides after crop trees are planted, but herbicide use in public and private loblolly pine plantations may face greater restrictions in the future. Fortunately, there are ways to manage competition...

Positive plant diversity-soil stability relationships are mediated through roots in the Songnen Grassland: Chronosequence evidence

Treesearch

Liang-Jun Hu; Ping Li; Qinfeng Guo

2013-01-01

Living plant diversity (excluding the litter issue) may affect below-ground properties and processes, which is critical to obtaining an integrated biodiversity-ecosystem functioning theory. However, related patterns and underlying mechanisms have rarely been examined, especially lacking long-term evidence. We conducted a factorial crossed sample survey to examine the...

Identification of coniferous fine roots to species using ribosomal PCR products of pooled root samples

EPA Science Inventory

Background/Question/Methods To inform an individual-based forest stand model emphasizing belowground competition, we explored the potential of using the relative abundances of ribosomal PCR products from pooled and milled roots, to allocate total root biomass to each of the thre...

Depression of belowground respiration rates at simulated high moose population densities in boreal forests.

PubMed

Persson, Inga-Lill; Nilsson, Mats B; Pastor, John; Eriksson, Tobias; Bergström, Roger; Danell, Kjell

2009-10-01

Large herbivores can affect the carbon cycle in boreal forests by changing productivity and plant species composition, which in turn could ultimately alter litter production, nutrient cycling, and the partitioning between aboveground and belowground allocation of carbon. Here we experimentally tested how moose (Alces alces) at different simulated population densities affected belowground respiration rates (estimated as CO2 flux) in young boreal forest stands situated along a site productivity gradient. At high simulated population density, moose browsing considerably depressed belowground respiration rates (24-56% below that of no-moose controls) except during June, where the difference only was 10%. Moose browsing depressed belowground respiration the most on low-productivity sites. Soil moisture and temperature did not affect respiration rates. Impact of moose on belowground respiration was closely linked to litter production and followed Michaelis-Menten dynamics. The main mechanism by which moose decrease belowground respiration rates is likely their effect on photosynthetic biomass (especially decreased productivity of deciduous trees) and total litter production. An increased productivity of deciduous trees along the site productivity gradient causes an unequal effect of moose along the same gradient. The rapid growth of deciduous trees may offer higher resilience against negative effects of moose browsing on litter production and photosynthate allocation to roots.

Contrasting above- and belowground organic matter decomposition and carbon and nitrogen dynamics in response to warming in High Arctic tundra.

PubMed

Blok, Daan; Faucherre, Samuel; Banyasz, Imre; Rinnan, Riikka; Michelsen, Anders; Elberling, Bo

2018-06-01

Tundra regions are projected to warm rapidly during the coming decades. The tundra biome holds the largest terrestrial carbon pool, largely contained in frozen permafrost soils. With warming, these permafrost soils may thaw and become available for microbial decomposition, potentially providing a positive feedback to global warming. Warming may directly stimulate microbial metabolism but may also indirectly stimulate organic matter turnover through increased plant productivity by soil priming from root exudates and accelerated litter turnover rates. Here, we assess the impacts of experimental warming on turnover rates of leaf litter, active layer soil and thawed permafrost sediment in two high-arctic tundra heath sites in NE-Greenland, either dominated by evergreen or deciduous shrubs. We incubated shrub leaf litter on the surface of control and warmed plots for 1 and 2 years. Active layer soil was collected from the plots to assess the effects of 8 years of field warming on soil carbon stocks. Finally, we incubated open cores filled with newly thawed permafrost soil for 2 years in the active layer of the same plots. After field incubation, we measured basal respiration rates of recovered thawed permafrost cores in the lab. Warming significantly reduced litter mass loss by 26% after 1 year incubation, but differences in litter mass loss among treatments disappeared after 2 years incubation. Warming also reduced litter nitrogen mineralization and decreased the litter carbon to nitrogen ratio. Active layer soil carbon stocks were reduced 15% by warming, while soil dissolved nitrogen was reduced by half in warmed plots. Warming had a positive legacy effect on carbon turnover rates in thawed permafrost cores, with 10% higher respiration rates measured in cores from warmed plots. These results demonstrate that warming may have contrasting effects on above- and belowground tundra carbon turnover, possibly governed by microbial resource availability. © 2017 John Wiley & Sons Ltd.

Identification and Phytotoxicity Assessment of Phenolic Compounds in Chrysanthemoides monilifera subsp. monilifera (Boneseed).

PubMed

Al Harun, Md Abdullah Yousuf; Johnson, Joshua; Uddin, Md Nazim; Robinson, Randall W

2015-01-01

Chrysanthemoides monilifera subsp. monilifera (boneseed), a weed of national significance in Australia, threatens indigenous species and crop production through allelopathy. We aimed to identify phenolic compounds produced by boneseed and to assess their phytotoxicity on native species. Phenolic compounds in water and methanol extracts, and in decomposed litter-mediated soil leachate were identified using HPLC, and phytotoxicity of identified phenolics was assessed (repeatedly) through a standard germination bioassay on native Isotoma axillaris. The impact of boneseed litter on native Xerochrysum bracteatum was evaluated using field soil in a greenhouse. Collectively, we found the highest quantity of phenolic compounds in boneseed litter followed by leaf, root and stem. Quantity varied with extraction media. The rank of phenolics concentration in boneseed was in the order of ferulic acid > phloridzin > catechin > p-coumaric acid and they inhibited germination of I. axillaris with the rank of ferulic acid > catechin > phloridzin > p-coumaric acid. Synergistic effects were more severe compared to individual phenolics. The litter-mediated soil leachate (collected after15 days) exhibited strong phytotoxicity to I. axillaris despite the level of phenolic compounds in the decomposed leachate being decreased significantly compared with their initial level. This suggests the presence of other unidentified allelochemicals that individually or synergistically contributed to the phytotoxicity. Further, the dose response phytotoxic impacts exhibited by the boneseed litter-mediated soil to native X. bracteatum in a more naturalistic greenhouse experiment might ensure the potential allelopathy of other chemical compounds in the boneseed invasion. The reduction of leaf relative water content and chlorophyll level in X. bracteatum suggest possible mechanisms underpinning plant growth inhibition caused by boneseed litter allelopathy. The presence of a substantial quantity of free proline in the target species also suggests that the plant was in a stressed condition due to litter allelopathy. These findings are important for better understanding the invasive potential of boneseed and in devising control strategies.

Identification and Phytotoxicity Assessment of Phenolic Compounds in Chrysanthemoides monilifera subsp. monilifera (Boneseed)

PubMed Central

Al Harun, Md Abdullah Yousuf; Johnson, Joshua; Uddin, Md Nazim; Robinson, Randall W.

2015-01-01

Chrysanthemoides monilifera subsp. monilifera (boneseed), a weed of national significance in Australia, threatens indigenous species and crop production through allelopathy. We aimed to identify phenolic compounds produced by boneseed and to assess their phytotoxicity on native species. Phenolic compounds in water and methanol extracts, and in decomposed litter-mediated soil leachate were identified using HPLC, and phytotoxicity of identified phenolics was assessed (repeatedly) through a standard germination bioassay on native Isotoma axillaris. The impact of boneseed litter on native Xerochrysum bracteatum was evaluated using field soil in a greenhouse. Collectively, we found the highest quantity of phenolic compounds in boneseed litter followed by leaf, root and stem. Quantity varied with extraction media. The rank of phenolics concentration in boneseed was in the order of ferulic acid > phloridzin > catechin > p-coumaric acid and they inhibited germination of I. axillaris with the rank of ferulic acid > catechin > phloridzin > p-coumaric acid. Synergistic effects were more severe compared to individual phenolics. The litter-mediated soil leachate (collected after15 days) exhibited strong phytotoxicity to I. axillaris despite the level of phenolic compounds in the decomposed leachate being decreased significantly compared with their initial level. This suggests the presence of other unidentified allelochemicals that individually or synergistically contributed to the phytotoxicity. Further, the dose response phytotoxic impacts exhibited by the boneseed litter-mediated soil to native X. bracteatum in a more naturalistic greenhouse experiment might ensure the potential allelopathy of other chemical compounds in the boneseed invasion. The reduction of leaf relative water content and chlorophyll level in X. bracteatum suggest possible mechanisms underpinning plant growth inhibition caused by boneseed litter allelopathy. The presence of a substantial quantity of free proline in the target species also suggests that the plant was in a stressed condition due to litter allelopathy. These findings are important for better understanding the invasive potential of boneseed and in devising control strategies. PMID:26465595

Plant litter chemistry alters the content and composition of organic carbon associated with soil mineral and aggregate fractions in invaded ecosystems.

PubMed

Tamura, Mioko; Suseela, Vidya; Simpson, Myrna; Powell, Brian; Tharayil, Nishanth

2017-10-01

Through the input of disproportionate quantities of chemically distinct litter, invasive plants may potentially influence the fate of organic matter associated with soil mineral and aggregate fractions in some of the ecosystems they invade. Although context dependent, these native ecosystems subjected to prolonged invasion by exotic plants may be instrumental in distinguishing the role of plant-microbe-mineral interactions from the broader edaphic and climatic influences on the formation of soil organic matter (SOM). We hypothesized that the soils subjected to prolonged invasion by an exotic plant that input recalcitrant litter (Japanese knotweed, Polygonum cuspidatum) would have a greater proportion of plant-derived carbon (C) in the aggregate fractions, as compared with that in adjacent soil inhabited by native vegetation that input labile litter, whereas the soils under an invader that input labile litter (kudzu, Pueraria lobata) would have a greater proportion of microbial-derived C in the silt-clay fraction, as compared with that in adjacent soils that receive recalcitrant litter. At the knotweed site, the higher C content in soils under P. cuspidatum, compared with noninvaded soils inhabited by grasses and forbs, was limited to the macroaggregate fraction, which was abundant in plant biomarkers. The noninvaded soils at this site had a higher abundance of lignins in mineral and microaggregate fractions and suberin in the macroaggregate fraction, partly because of the greater root density of the native species, which might have had an overriding influence on the chemistry of the above-ground litter input. At the kudzu site, soils under P. lobata had lower C content across all size fractions at a 0-5 cm soil depth despite receiving similar amounts of Pinus litter. Contrary to our prediction, the noninvaded soils receiving recalcitrant Pinus litter had a similar abundance of plant biomarkers across both mineral and aggregate fractions, potentially because of the higher surface area of soil minerals at this site. The plant biomarkers were lower in the aggregate fractions of the P. lobata-invaded soils, compared with noninvaded pine stands, potentially suggesting a microbial co-metabolism of pine-derived compounds. These results highlight the complex interactions among litter chemistry, soil biota, and minerals in mediating soil C storage in unmanaged ecosystems; these interactions are particularly important under global changes that may alter plant species composition and hence the quantity and chemistry of litter inputs in terrestrial ecosystems. © 2017 John Wiley & Sons Ltd.

Hydrologic remediation for the Deepwater Horizon incident drove ancillary primary production increase in coastal swamps

USGS Publications Warehouse

Middleton, Beth A.; Johnson, Darren; Roberts, Brian J

2015-01-01

As coastal wetlands subside worldwide, there is an urgency to understand the hydrologic drivers and dynamics of plant production and peat accretion. One incidental test of the effects of high rates of discharge on forested wetland production occurred in response to the 2010 Deepwater Horizon incident, in which all diversions in Louisiana were operated at or near their maximum discharge level for an extended period to keep offshore oil from threatened coastal wetlands. Davis Pond Diversion was operated at six times the normal discharge levels for almost 4 months, so that Taxodium distichum swamps downstream of the diversion experienced greater inundation and lower salinity. After this remediation event in 2010, above-ground litter production increased by 2.7 times of production levels in 2007–2011. Biomass of the leaf and reproductive tissues of several species increased; wood litter was minimal and did not change during this period. Root production decreased in 2010 but subsequently returned to pre-remediation values in 2011. Both litter and root production remained high in the second growing season after hydrologic remediation. Annual tree growth (circumference increment) was not significantly altered by the remediation. The potential of freshwater pulses for regulating tidal swamp production is further supported by observations of higher T. distichum growth in lower salinity and/or pulsed environments across the U.S. Gulf Coast. Usage of freshwater pulses to manage altered estuaries deserves further consideration, particularly because the timing and duration of such pulses could influence both primary production and peat accretion.

Optimal partitioning theory revisited: nonstructural carbohydrates dominate root mass responses to nitrogen.

PubMed

Kobe, Richard K; Iyer, Meera; Walters, Michael B

2010-01-01

Under optimal partitioning theory (OPT), plants preferentially allocate biomass to acquire the resource that most limits growth. Within this framework, higher root mass under low nutrients is often assumed to reflect an allocation response to build more absorptive surface. However, higher root mass also could result from increased storage of total nonstructural carbohydrates (TNC) without an increase in non-storage mass or root surface area. To test the relative contributions of TNC and non-storage mass as components of root mass responses to resources, we grew seedlings of seven northern hardwood tree species (black, red, and white oak, sugar and red maple, American beech, and black cherry) in a factorial light x nitrogen (N) greenhouse experiment. Because root mass is a coarse metric of absorptive surface, we also examined treatment effects on fine-root surface area (FRSA). Consistent with OPT, total root mass as a proportion of whole-plant mass generally was greater in low vs. high N. However, changes in root mass were influenced by TNC mass in all seven species and were especially strong in the three oak species. In contrast, non-storage mass contributed to increased total root mass under low N in three of the seven species. Root morphology also responded, with higher fine-root surface area (normalized to root mass) under low vs. high N in four species. Although biomass partitioning responses to resources were consistent with OPT, our results challenge the implicit assumption that increases in root mass under low nutrient levels primarily reflect allocation shifts to build more root surface area. Rather, root responses to low N included increases in: TNC, non-storage mass and fine-root surface area, with increases in TNC being the largest and most consistent of these responses. The greatest TNC accumulation occurred when C was abundant relative to N. Total nonstructural carbohydrates storage could provide seedlings a carbon buffer when respiratory or growth demands are not synchronized with photosynthesis, flexibility in responding to uncertain and fluctuating abiotic and biotic conditions, and increased access to soil resources by providing an energy source for mycorrhizae, decomposers in the rhizosphere, or root uptake of nutrients.

Fine Root Dynamics and Forest Production Across a Calcium Gradient in Northern Hardwood and Conifer Ecosystems

Treesearch

Byung Bae Park; Ruth D. Yanai; Timothy J. Fahey; Scott W. Bailey; Thomas G. Siccama; James B. Shanley; Natalie L. Cleavitt

2008-01-01

Losses of soil base cations due to acid rain have been implicated in declines of red spruce and sugar maple in the northeastern USA. We studied fine root and aboveground biomass and production in five northern hardwood and three conifer stands differing in soil Ca status at Sleepers River, VT; Hubbard Brook, NH; and Cone Pond, NH. Neither aboveground biomass and...

Short-term effects of seasonal prescribed burning on the ectomycorrhizal fungal community and fine root biomass in ponderosa pine stands in the Blue Mountains of Oregon.

Treesearch

J.E. Smith; D. McKay; C.G. Niwa; W.G. Thies; G. Brenner; J.W. Spatafora

2004-01-01

The effects of seasonal prescribed fire on the belowground ectomycorrhizal community and live fine root biomass were investigated before, 1 year after, and 2 years after prescribed underburning. Ectomycorrhizas were sampled from four replications of three treatments (fall underburning, spring underburning, and a nonburned.control) in a randomized complete block design...

Effects of Down- and Up-regulated Lignin Biosynthesis in Populus of Soil Carbon Transformation and Storage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chiang, Vincent, L.; Pregitzer, Kurt, S.

2010-03-30

Our objective is to understand how rates of soil C formation and plant biomass are influenced by changes in plant growth and performance resulting from lowered lignin and altered lignin S/G ratios. A greenhouse study of the effects of altered lignin in SOC formation and plant biomass has been completed as of November 2009. Wild-type (control) and three transgenic aspen lines expressing reduced stem lignin concentrations and/or increased syringyl (S) to guaiacyl (G) ratio lignin were grown in greenhouse mesocosms. Soil was collected from the Colorado Central Plains Experimental Range (CPER) northeast of Fort Collins, Colorado. The Colorado soil ismore » an Olney fine sandy loam (fine-loamy, mixed, superactive, mesic Ultic Haplargrid). Plants at the surface mineral soil up to 5 cm depth were removed and the underlying soil was sampled to a depth of 30 cm. Soils were immediately shipped to Reno, NV. This C4 soil was then used to trace belowground C inputs by the C3 plants into the soil using the 13C natural abundance methods as described in the DOE proposal. Transgenic quaking aspen were generated by the Forest Biotechnology Group at North Carolina State University (NCSU) using Agrobacterium-mediated transformation, the seedlings were then shipped to Reno, NV. Rooted seedlings were transferred from sterile agar into small pots with 250 g of C4 grass-dominated soil and kept in mist chambers in a greenhouse for four to six weeks. Plants were arranged randomly in adjacent greenhouse benches, soil blanks were placed randomly among the plants and treated in the same manner as pots with plants. Growth measurements were conducted for all plants in both groups and consisted of height, width at base of stem, number of leaves and length and width of every leaf in every tree. Plants were grown for a period of 120-140 days. At harvest, the aboveground portions of the trees were separated into leaves, litter, and stems. Soils were immediately frozen after harvest and roots were subsequently removed from thawed soil. Roots were further separated into coarse (> 1mm) and fine (< 1mm) roots. All tissue samples were dried for 48 h at 65 ºC, weighed, and then milled for analysis. Fine roots were analyzed for C and N concentrations and 13C (± 0.25‰). All other plant tissues were analyzed for C and N concentrations. Soils were analyzed for available soil nutrients, after harvest and root extraction, soils (including soil blanks pots) were analyzed for C and N concentrations and 13C using the same procedure as the fine roots. Growth measurements from both experiments showed that plant lines differed in heights, number of leaves, total biomass, and total leaf area; but did not differ in average leaf size or stem width. The low lignin line (23) and the control line (271) were similar to each other for all measured characteristics and were significantly larger than the low lignin + high S/G ratio lines (72 and 75). C/N ratios were highest for low lignin plants (line 23) in the woody tissue (roots and stems). The soil C concentrations and total C contents in the soil did not vary significantly among lines. There were no significant difference among lines in the amount (g) of new soil C, however, the soil from the control line (271) and low lignin line (23) had the highest new C concentration and total new C input into the soil. All soils with plants lost some of the existing “old” C, but the loss of old C was not significantly different among lines. Our findings support our first hypothesis, that high S/G ratio lines (72, 75, and 93) have less biomass, and soil C formation is affected as a result of the lower biomass. Our second hypothesis, that low lignin lines (23) would have more biomass and greater soil C formation, was partially supported. Although line 23 did not significantly out-perform the control line (271), the values for all measured growth and soil C characteristics were either comparable or greater than those for 271. The second part of this hypothesis, that line 23 would mobilize more old soil C and alter C/N ratios, was only partially supported by our data. Line 23 did not mobilize more old soil C, but the woody tissue C/N ratios were significantly higher than other lines, suggesting that tissue from line 23 plants is possibly more recalcitrant to decomposition. The comparable performance to the control lines coupled with the reduced lignin in the wood structure gives line 23 an advantage over line 271 in terms of pulping efficiency. The higher C/N ratios in the woody tissue could also suggest it has an advantage for C sequestration in tissue.« less

Root development during soil genesis: effects of root-root interactions, mycorrhizae, and substrate

NASA Astrophysics Data System (ADS)

Salinas, A.; Zaharescu, D. G.

2015-12-01

A major driver of soil formation is the colonization and transformation of rock by plants and associated microbiota. In turn, substrate chemical composition can also influence the capacity for plant colonization and development. In order to better define these relationships, a mesocosm study was set up to analyze the effect mycorrhizal fungi, plant density and rock have on root development, and to determine the effect of root morphology on weathering and soil formation. We hypothesized that plant-plant and plant-fungi interactions have a stronger influence on root architecture and rock weathering than the substrate composition alone. Buffalo grass (Bouteloua dactyloides) was grown in a controlled environment in columns filled with either granular granite, schist, rhyolite or basalt. Each substrate was given two different treatments, including grass-microbes and grass-microbes-mycorrhizae and incubated for 120, 240, and 480 days. Columns were then extracted and analyzed for root morphology, fine fraction, and pore water major element content. Preliminary results showed that plants produced more biomass in rhyolite, followed by schist, basalt, and granite, indicating that substrate composition is an important driver of root development. In support of our hypothesis, mycorrhizae was a strong driver of root development by stimulating length growth, biomass production, and branching. However, average root length and branching also appeared to decrease in response to high plant density, though this trend was only present among roots with mycorrhizal fungi. Interestingly, fine fraction production was negatively correlated with average root thickness and volume. There is also slight evidence indicating that fine fraction production is more related to substrate composition than root morphology, though this data needs to be further analyzed. Our hope is that the results of this study can one day be applied to agricultural research in order to promote the production of crops on traditionally un-arable land.

Comparison of alternative image reformatting techniques in micro-computed tomography and tooth clearing for detailed canal morphology.

PubMed

Lee, Ki-Wook; Kim, Yeun; Perinpanayagam, Hiran; Lee, Jong-Ki; Yoo, Yeon-Jee; Lim, Sang-Min; Chang, Seok Woo; Ha, Byung-Hyun; Zhu, Qiang; Kum, Kee-Yeon

2014-03-01

Micro-computed tomography (MCT) shows detailed root canal morphology that is not seen with traditional tooth clearing. However, alternative image reformatting techniques in MCT involving 2-dimensional (2D) minimum intensity projection (MinIP) and 3-dimensional (3D) volume-rendering reconstruction have not been directly compared with clearing. The aim was to compare alternative image reformatting techniques in MCT with tooth clearing on the mesiobuccal (MB) root of maxillary first molars. Eighteen maxillary first molar MB roots were scanned, and 2D MinIP and 3D volume-rendered images were reconstructed. Subsequently, the same MB roots were processed by traditional tooth clearing. Images from 2D, 3D, 2D + 3D, and clearing techniques were assessed by 4 endodontists to classify canal configuration and to identify fine anatomic structures such as accessory canals, intercanal communications, and loops. All image reformatting techniques in MCT showed detailed configurations and numerous fine structures, such that none were classified as simple type I or II canals; several were classified as types III and IV according to Weine classification or types IV, V, and VI according to Vertucci; and most were nonclassifiable because of their complexity. The clearing images showed less detail, few fine structures, and numerous type I canals. Classification of canal configuration was in 100% intraobserver agreement for all 18 roots visualized by any of the image reformatting techniques in MCT but for only 4 roots (22.2%) classified according to Weine and 6 (33.3%) classified according to Vertucci, when using the clearing technique. The combination of 2D MinIP and 3D volume-rendered images showed the most detailed canal morphology and fine anatomic structures. Copyright © 2014 American Association of Endodontists. Published by Elsevier Inc. All rights reserved.

Carbon and nitrogen distribution in oak-hickory forests distributed along a productivity gradient

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reber, R.T.; Kaczmarek, D.J.; Pope, P.E.

1993-12-31

Biomass, carbon and nitrogen pools were determined for oak-hickory forests of varying productivity. Little information of this type is available for the central hardwood region. Six oak-hickory dominated forests were chosen to represent a range in potential site productivity as influenced by soil type, amount of recyclable nutrients and available water. Biomass, carbon and nitrogen storage were determined for the following components: above ground standing biomass, fine root biomass, forest floor organic layers and litterfall. As site sequestered at each site was dependent more on the amount of living biomass at each site Litterfall, to some extent, increased with increasingmore » site productivity. As potential site productivity decreased, total fine root biomass increased. The data suggest that as site quality decreased fine root production and turnover may become as important in nutrient cycling as annual litterfall.« less

Soil Organic Carbon Sources of Respired CO2 in a Mid-successional North Temperate Forest

NASA Astrophysics Data System (ADS)

Medina, N. L.; Hatton, P. J.; Le Moine, J.; Nadelhoffer, K. J.

2015-12-01

Given that soil organic matter (SOM) is the largest global terrestrial carbon (C) pool, some fractions of which have turnover times of centuries to millennia, it is critical to understand the mechanisms by which higher net primary productivity (NPP) and higher litter inputs, in the future, as predicted by some models, might alter the potentials of forest soils to serve as long-term C sinks. Here, we use a 10-year-old site in the DIRT (Detritus Input and Removal Treatments) network of litter manipulations to compare plots in a forested, northern-temperate sandy soil that were subjected to double-leaf-litter additions (DL) and both root- and leaf-litter removals (no inputs, NI) to non-manipulated controls. Previous data show that rather than increasing soil organic carbon (SOC) stocks, plots receiving doubled litter inputs lose SOC at rates similar to losses in Control soils. To trace the source of extra mineralized SOC, we analyzed field CO2 effluxes for δ13C and characterized SOC of varying degrees of organo-mineral association with sequential density fractionations. Soils in DL plots respired significantly faster (p=0.095) and proportionally more (p=0.015) than control soils over the course of July, August, and October 2014. This suggests a greater fresh litter contribution to soil efflux in DL than in Control plots after 10 years of treatment. Preliminary data show that intermediate (1.85 - 2.4 g/mL) and dense (>2.4 g/mL) fractions are relatively larger in DL than in Control soils. This suggests that the addition C from doubled litter could be more rapidly transferred into those more dense fractions, or that higher litter inputs prime the decomposition of lighter particulate SOC forms, leading to a relative increase of the dense organo-mineral associations. Using δ13C values to parameterize a multi-source mixing model, we partition the fate of both fresh litter and partially-decomposed SOC and will present on the modeled relative contributions of various sources to field CO2 effluxes from diverse treatments. Our preliminary data and expected results may suggest important contributions from mineral-associated SOC, rather than simply from free SOC, to seasonal field soil respiration. Thus, with higher litterfall rates, C that similar forest soils sequester may exhibit shorter ecosystem-level residence times.

Leaching of radionuclides from decaying blueberry leaves: Relative rate independent of concentration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sheppard, S.C.; Evenden, W.G.

Leaching of radionuclides from decaying vegetation has not been extensively investigated, especially for radionuclides other than {sup 137}Cs. The authors obtained leaves of blueberry (Vaccinium angustifolium {times} V. corymbosum) that contained over 25-fold ranges in Se, Cs, and I concentrations, as well as a small quantity of leaves containing detectable U. All were contaminated by way of root uptake. Leaching took place for a period of 1 yr in the laboratory, using leach water from forest litter. Monthly, measurements were made of the radionuclide contents and decaying leaf dry weights. The data conformed to an exponential decay model with twomore » first-order components. In no case did the relative loss rates vary systematically with the initial tissue radionuclide concentrations. Loss rates decreased in the order Cs > I > U > dry wt. > Se. Because of the low leaching rate of Se relative to the loss of dry weight, decaying litter may actually accumulate elements such as Se. Accumulation of radionuclides in litter could have important implications for lateral transport, recycling, and direct incorporation into edible mushrooms.« less

A comparison of 3 models of 1-hr timelag fuel moisture in Hawaii

Treesearch

D.R. Weise; F.M. Fujioka; R.M. Nelson

2005-01-01

The U.S. National Fire Danger Rating System currently uses a moisture diffusion model developed by Fosberg to predict fine  fuel moisture in woody fuels. Nelson recently developed a fuel moisture model that includes functions for both heat and moisture  transfer. Fuel moisture samples were collected in Hawaii hourly for up to 96 h for three litter, one herbaceous, and...

Effect of tree roots on a shear zone: modeling reinforced shear stress.

Treesearch

Kazutoki Abe; Robert R. Ziemer

1991-01-01

Tree roots provide important soil reinforcement that impoves the stability of hillslopes. After trees are cut and roots begin to decay, the frequency of slope failures can increase. To more fully understand the mechanics of how tree roots reinforce soil, fine sandy soil containing pine roots was placed in a large shear box in horizontal layers and sheared across a...

Segregation and Alteration of Phenolic and Aliphatic Components of Root and Leaf Litter by Detritivores and Microbes

NASA Astrophysics Data System (ADS)

Filley, T. R.; Altmann, J.; Szlavecz, K. A.; Kalbitz, K.; Gamblin, D.; Nierop, K.

2012-12-01

The physical and microbial transformation of plant detritus in the litter layer and soil is accompanied by chemical separation of progressively soluble fractions and their movement into the rhizosphere driving subsequent soil processes. We investigated the combined action of specific detritivores, microbial decay, and leaching on the chemical separation of plant aromatic and aliphatic components from root, wood, and leaf tissue using 13C-TMAH thermochemolysis. This method enabled the simultaneous analysis of hydrolyzable tannin and lignin fragments, substituted fatty acids, and condensed tannin composition and revealed process-specific chemical transformations to plant secondary compounds. Long-term incubation and field sampling demonstrated how plant residues are progressively leached of the water soluble, oxidized fragments generated through decay. The residues appeared only slightly altered, in the case of brown rot wood, or enriched in aliphatic fragments, in the case of leaf and root tissue. Water extractable fractions were always selectively dominated by polyphenolics, either as demethylated lignin or tannins, and nearly devoid of aliphatic materials, despite high concentrations in the starting materials. Additionally, for plant materials with high tannin contents, such as pine needles, consumption and passage through some arthropod guts revealed what appeared to be microbially-mediated methylation of phenols, and a loss of tannins in leachates. These findings are indications for an in-situ phenol detoxification mechanism. This research provides important information regarding the links between biochemical decay and the chemical nature of organic matter removed and remaining in the soil profile.

Fine Mapping of QUICK ROOTING 1 and 2, Quantitative Trait Loci Increasing Root Length in Rice.

PubMed

Kitomi, Yuka; Nakao, Emari; Kawai, Sawako; Kanno, Noriko; Ando, Tsuyu; Fukuoka, Shuichi; Irie, Kenji; Uga, Yusaku

2018-02-02

The volume that the root system can occupy is associated with the efficiency of water and nutrient uptake from soil. Genetic improvement of root length, which is a limiting factor for root distribution, is necessary for increasing crop production. In this report, we describe identification of two quantitative trait loci (QTLs) for maximal root length, QUICK ROOTING 1 ( QRO1 ) on chromosome 2 and QRO2 on chromosome 6, in cultivated rice ( Oryza sativa L.). We measured the maximal root length in 26 lines carrying chromosome segments from the long-rooted upland rice cultivar Kinandang Patong in the genetic background of the short-rooted lowland cultivar IR64. Five lines had longer roots than IR64. By rough mapping of the target regions in BC 4 F 2 populations, we detected putative QTLs for maximal root length on chromosomes 2, 6, and 8. To fine-map these QTLs, we used BC 4 F 3 recombinant homozygous lines. QRO1 was mapped between markers RM5651 and RM6107, which delimit a 1.7-Mb interval on chromosome 2, and QRO2 was mapped between markers RM20495 and RM3430-1, which delimit an 884-kb interval on chromosome 6. Both QTLs may be promising gene resources for improving root system architecture in rice. Copyright © 2018 Kitomi et al.

Drought and detritivores determine leaf litter decomposition in calcareous streams of the Ebro catchment (Spain).

PubMed

Monroy, Silvia; Menéndez, Margarita; Basaguren, Ana; Pérez, Javier; Elosegi, Arturo; Pozo, Jesús

2016-12-15

Drought, an important environmental factor affecting the functioning of stream ecosystems, is likely to become more prevalent in the Mediterranean region as a consequence of climate change and enhanced water demand. Drought can have profound impacts on leaf litter decomposition, a key ecosystem process in headwater streams, but there is still limited information on its effects at the regional scale. We measured leaf litter decomposition across a gradient of aridity in the Ebro River basin. We deployed coarse- and fine-mesh bags with alder and oak leaves in 11 Mediterranean calcareous streams spanning a range of over 400km, and determined changes in discharge, water quality, leaf-associated macroinvertebrates, leaf quality and decomposition rates. The study streams were subject to different degrees of drought, specific discharge (Ls -1 km -2 ) ranging from 0.62 to 9.99. One of the streams dried out during the experiment, another one reached residual flow, whereas the rest registered uninterrupted flow but with different degrees of flow variability. Decomposition rates differed among sites, being lowest in the 2 most water-stressed sites, but showed no general correlation with specific discharge. Microbial decomposition rates were not correlated with final nutrient content of litter nor to fungal biomass. Total decomposition rate of alder was positively correlated to the density and biomass of shredders; that of oak was not. Shredder density in alder bags showed a positive relationship with specific discharge during the decomposition experiment. Overall, the results point to a complex pattern of litter decomposition at the regional scale, as drought affects decomposition directly by emersion of bags and indirectly by affecting the functional composition and density of detritivores. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

Soil respiration and root biomass responses to burning in calabrian pine (Pinus brutia) stands in Edirne, Turkey.

PubMed

Tufekcioglu, Aydin; Kucuk, Mehmet; Bilmis, Tuncay; Altun, Lokman; Yilmaz, Murat

2010-01-01

In this study soil properties and root biomass responses to prescribed fire were investigated in 25-30 year-old calabrian pine (Pinus brutia Ten.) stands in Edirne, Turkey. The stands were established by planting and were subjected to prescribed burning in July 2005. Soil respiration rates were determined every two months using the soda-lime method over a two-year period. Fine (> or = 2 mm diameter) and small root (> 2-5 mm diameter) biomass were sampled approximately bimonthly using the sequential coring method. Soil respiration rates in burned sites were significantly higher than in control sites during the summer season but there was no significant difference in the other seasons. Soil respiration rates were correlated significantly with soil moisture and soil temperature. Fine and small root biomass were significantly lower in burned sites than in control sites. Mean fine root biomass values were 3204 kg ha(-1) for burned and 3772 kg ha(-1) for control sites. Annual soil CO2 releases totaled 515 g Cm(-2) for burned and 418 g C m(-2) for control sites. Our results indicate that, depending on site conditions, fire could be used successfully as a tool in the management of calabrian pine stands in the study area.

Allelopathy and resource competition: the effects of Phragmites australis invasion in plant communities.

PubMed

Uddin, Md Nazim; Robinson, Randall William

2017-12-01

Phragmites australis, a ubiquitous wetland plant, has been considered one of the most invasive species in the world. Allelopathy appears to be one of the invasion mechanisms, however, the effects could be masked by resource competition among target plants. The difficulty of distinguishing allelopathy from resource competition among plants has hindered investigations of the role of phytotoxic allelochemicals in plant communities. This has been addressed via experiments conducted in both the greenhouse and laboratory by growing associated plants, Melaleuca ericifolia, Rumex conglomeratus, and model plant, Lactuca sativa at varying densities with the allelopathic plant, P. australis, its litter and leachate of P. australis litter. This study investigated the potential interacting influences of allelopathy and resource competition on plant growth-density relationships. In greenhouse, the root exudates mediated effects showed the strongest growth inhibition of M. ericifolia at high density whereas litter mediated results revealed increased growth at medium density treatments compared to low and high density. Again, laboratory experiments related to seed germination and seedling growth of L. sativa and R. conglomeratus exhibited phytotoxicity decreased showing positive growth as plant density increased and vice versa. Overall, the differential effects were observed among experiments but maximum individual plant biomass and some other positive effects on plant traits such as root and shoot length, chlorophyll content occurred at an intermediate density. This was attributed to the sharing of the available phytotoxin among plants at high densities which is compatible to density-dependent phytotoxicity model. The results demonstrated that plant-plant interference is the combined effect of allelopathy and resource competition with many other factors but this experimental design, target-neighbor mixed-culture in combination of plant grown at varying densities with varying level of phytotoxins, mono-culture, can successfully separate allelopathic effects from competition.

Effect of drought on fine roots productivity in poplar-based short rotation coppice

NASA Astrophysics Data System (ADS)

Mani Tripathi, Abhishek; Fischer, Milan; Berhongaray, Gonzalo; Orság, Matěj; Trnka, Miroslav

2015-04-01

Short rotation woody crops (SRWC) are alternative source of bioenergy, which apart from their 'carbon neutrality' have potential to store carbon (C) into soil and mitigate the increasing CO2 emission. Studies of below ground biomass of trees are divided into two types according to root diameter - analysis of fine roots (less than 2 mm) and coarse roots (more than 2 mm). Trees roots are spatially highly heterogeneous and it requires large number of samples to obtain a representative estimate of belowground biomass. For this study we used hybrid poplar clone J-105 (Populus nigra x P. maximowiczii) grown under short rotation coppice system in the region of Bohemian-Moravian Highland (49o32'N, 16o15'E and altitude 530 m a.s.l.) since April 2000. The plantation with planting density of 9,216 trees ha-1 was established on the former agricultural land and the length of the rotation cycle was set to 6-8 years. While mean annual rainfall was 609 mm with mean annual temperature 7.2oC during 1981-2013 significant increase of temperature and more frequent droughts are expected. In 2011, we established drought experiment based on throughfall exclusion system, reducing up to 70 % of throughfall precipitation. Thus 2 treatments with normal and lowered soil moisture levels were introduced. In January and February 2014, we cored 18 places including drought and control using root bipartite auger. The main goal of the study is to assess the response of fine roots productivity and fine roots vertical distribution on the reduced soil water availability. Results will be presented at the conference. Acknowledgements: This study was funded by research project IGA Mendel University 2014 "Study of below ground biomass in short rotation poplar coppice (J-105) in the Czech-Moravian Highlands", project PASED (KONTAKT II LH12037 ʺDevelopment of models for the assessment of abiotic stresses in selected energy woody plantsʺ and "Building up a multidisciplinary scientific team focused on drought" No. CZ.1.07/2.3.00/20.0248.

Untangling the contribution of aspect, drainage position and elevation to the spatial variability of fine surface fuels in south east Australian forests

NASA Astrophysics Data System (ADS)

Sheridan, Gary; nyman, petter; Duff, Tom; Baillie, Craig; Bovill, William; Lane, Patrick; Tolhurst, Kevin

2015-04-01

The prediction of fuel moisture content is important for estimating the rate of spread of wildfires, the ignition probability of firebrands, and for the efficient scheduling of prescribed fire. The moisture content of fine surface fuels varies spatially at large scales (10's to 100's km) due to variation in meteorological variables (eg. temperature, relative humidity, precipitation). At smaller scales (100's of metres) in steep topography spatial variability is attributed to topographic influences that include differences in radiation due to aspect and slope, differences in precipitation, temperature and relative humidity due to elevation, and differences in soil moisture due to hillslope drainage position. Variable forest structure and canopy shading adds further to the spatial variability in surface fuel moisture. In this study we aim to combine daily 5km resolution gridded weather data with 20m resolution DEM and vegetation structure data to predict the spatial variability of fine surface fuels in steep topography. Microclimate stations were established in south east Australia to monitor surface fine fuel moisture continuously (every 15 minutes) using newly developed instrumented litter packs, in addition to temperature and relative humidity measurements inside the litter pack, and measurement of precipitation and energy inputs above and below the forest canopy. Microclimate stations were established across a gradient of aspect (5 stations), drainage position (7 stations), elevation (15 stations), and canopy cover conditions (6 stations). The data from this extensive network of microclimate stations across a broad spectrum of topographic conditions is being analysed to enable the downscaling of gridded weather data to spatial scales that are relevant to the connectivity of wildfire fuels and to the scheduling and outcome of prescribed fires. The initial results from the first year of this study are presented here.

Patterns of nocturnal rehydration in root tissues of Vaccinium corymbosum L. under severe drought conditions

PubMed Central

Valenzuela-Estrada, Luis R.; Richards, James H.; Diaz, Andres; Eissensat, David M.

2009-01-01

Although roots in dry soil layers are commonly rehydrated by internal hydraulic redistribution during the nocturnal period, patterns of tissue rehydration are poorly understood. Rates of nocturnal rehydration were examined in roots of different orders in Vaccinium corymbosum L. ‘Bluecrop’ (Northern highbush blueberry) grown in a split-pot system with one set of roots in relatively moist soil and the other set of roots in dry soil. Vaccinium is noted for a highly branched and extremely fine root system. It is hypothesized that nocturnal root tissue rehydration would be slow, especially in the distal root orders because of their greater hydraulic constraints (smaller vessel diameters and fewer number of vessels). Vaccinium root hydraulic properties delayed internal water movement. Even when water was readily available to roots in the wet soil and transpiration was minimal, it took a whole night-time period of 12 h for the distal finest roots (1st to 4th order) under dry soil conditions to reach the same water potentials as fine roots in moist soil (1st to 4th order). Even though roots under dry soil equilibrated with roots in moist soil, the equilibrium point reached before sunrise was about –1.2 MPa, indicating that tissues were not fully rehydrated. Using a single-branch root model, it was estimated that individual roots exhibiting the lowest water potentials in dry soil were 1st order roots (distal finest roots of the root system). However, considered at the branch level, root orders with the highest hydraulic resistances corresponded to the lowest orders of the permanent root system (3rd-, 4th-, and 5th-order roots), thus indicating possible locations of hydraulic safety control in the root system of this species. PMID:19188275

Patterns of nocturnal rehydration in root tissues of Vaccinium corymbosum L. under severe drought conditions.

PubMed

Valenzuela-Estrada, Luis R; Richards, James H; Diaz, Andres; Eissensat, David M

2009-01-01

Although roots in dry soil layers are commonly rehydrated by internal hydraulic redistribution during the nocturnal period, patterns of tissue rehydration are poorly understood. Rates of nocturnal rehydration were examined in roots of different orders in Vaccinium corymbosum L. 'Bluecrop' (Northern highbush blueberry) grown in a split-pot system with one set of roots in relatively moist soil and the other set of roots in dry soil. Vaccinium is noted for a highly branched and extremely fine root system. It is hypothesized that nocturnal root tissue rehydration would be slow, especially in the distal root orders because of their greater hydraulic constraints (smaller vessel diameters and fewer number of vessels). Vaccinium root hydraulic properties delayed internal water movement. Even when water was readily available to roots in the wet soil and transpiration was minimal, it took a whole night-time period of 12 h for the distal finest roots (1st to 4th order) under dry soil conditions to reach the same water potentials as fine roots in moist soil (1st to 4th order). Even though roots under dry soil equilibrated with roots in moist soil, the equilibrium point reached before sunrise was about -1.2 MPa, indicating that tissues were not fully rehydrated. Using a single-branch root model, it was estimated that individual roots exhibiting the lowest water potentials in dry soil were 1st order roots (distal finest roots of the root system). However, considered at the branch level, root orders with the highest hydraulic resistances corresponded to the lowest orders of the permanent root system (3rd-, 4th-, and 5th-order roots), thus indicating possible locations of hydraulic safety control in the root system of this species.

Root chemistry and soil fauna, but not soil abiotic conditions explain the effects of plant diversity on root decomposition.

PubMed

Chen, Hongmei; Oram, Natalie J; Barry, Kathryn E; Mommer, Liesje; van Ruijven, Jasper; de Kroon, Hans; Ebeling, Anne; Eisenhauer, Nico; Fischer, Christine; Gleixner, Gerd; Gessler, Arthur; González Macé, Odette; Hacker, Nina; Hildebrandt, Anke; Lange, Markus; Scherer-Lorenzen, Michael; Scheu, Stefan; Oelmann, Yvonne; Wagg, Cameron; Wilcke, Wolfgang; Wirth, Christian; Weigelt, Alexandra

2017-11-01

Plant diversity influences many ecosystem functions including root decomposition. However, due to the presence of multiple pathways via which plant diversity may affect root decomposition, our mechanistic understanding of their relationships is limited. In a grassland biodiversity experiment, we simultaneously assessed the effects of three pathways-root litter quality, soil biota, and soil abiotic conditions-on the relationships between plant diversity (in terms of species richness and the presence/absence of grasses and legumes) and root decomposition using structural equation modeling. Our final structural equation model explained 70% of the variation in root mass loss. However, different measures of plant diversity included in our model operated via different pathways to alter root mass loss. Plant species richness had a negative effect on root mass loss. This was partially due to increased Oribatida abundance, but was weakened by enhanced root potassium (K) concentration in more diverse mixtures. Equally, grass presence negatively affected root mass loss. This effect of grasses was mostly mediated via increased root lignin concentration and supported via increased Oribatida abundance and decreased root K concentration. In contrast, legume presence showed a net positive effect on root mass loss via decreased root lignin concentration and increased root magnesium concentration, both of which led to enhanced root mass loss. Overall, the different measures of plant diversity had contrasting effects on root decomposition. Furthermore, we found that root chemistry and soil biota but not root morphology or soil abiotic conditions mediated these effects of plant diversity on root decomposition.

Simulated root dynamics of a 160-year-old sugar maple (Acer saccharum Marsh.) tree with and without ozone exposure using the TREGRO model.

PubMed

Retzlaff, W. A.; Weinstein, D. A.; Laurence, J. A.; Gollands, B.

1996-01-01

Because of difficulties in directly assessing root responses of mature forest trees exposed to atmospheric pollutants, we have used the model TREGRO to analyze the effects of a 3- and a 10-year exposure to ozone (O(3)) on root dynamics of a simulated 160-year-old sugar maple (Acer saccharum Marsh.) tree. We used existing phenological, allometric, and growth data to parameterize TREGRO to produce a simulated 160-year-old tree. Simulations were based on literature values for sugar maple fine root production and senescence and the photosynthetic responses of sugar maple seedlings exposed to O(3) in open-top chambers. In the simulated 3-year exposure to O(3), 2 x ambient atmospheric O(3) concentrations reduced net carbon (C) gain of the 160-year-old tree. This reduction occurred in the C storage pools (total nonstructural carbohydrate, TNC), with most of the reduction occurring in coarse (woody) roots. Total fine root production and senescence were unaffected by the simulated 3-year exposure to O(3). However, extending the simulated O(3) exposure period to 10 years depleted the TNC pools of the coarse roots and reduced total fine root production. Similar reductions in TNC pools have been observed in forest-grown sugar maple trees exhibiting symptoms of stress. We conclude that modeling can aid in evaluating the belowground response of mature forest trees to atmospheric pollution stress and could indicate the potential for gradual deterioration of tree health under conditions of long-term stress, a situation similar to that underlying the decline of sugar maple trees.

Influence of repeated prescribed fire and herbicide application on the fine root biomass of young longleaf pine

Treesearch

Mary Anne Sword Sayer; Eric A. Kuehler

2010-01-01

Photosynthate from mature foliage provides the energy source necessary for longleaf pine (Pinus palustris Mill.) root system expansion. Crown scorch caused by repeated prescribed fire could decrease this energy and, in turn, reduce new root production. We conducted a study to assess the root biomass of restored longleaf pine saplings in response to...

Quantifying the coarse-root biomass of intensively managed loblolly pine plantations

Treesearch

Ashley T. Miller; H. Lee Allen; Chris A. Maier

2006-01-01

Most of the carbon accumulation during a forest rotation is in plant biomass and the forest floor. Most of the belowground biomass in older loblolly pine (Pinus taeda L.) forests is in coarse roots, and coarse roots persist longer after harvest than aboveground biomass and fine roots. The main objective was to assess the carbon accumulation in coarse...

Root respiration in North American forests: Effects of nitrogen concentration and temperature across biomes

Treesearch

A.J. Burton; K.S. Pregitzer; R.W. Ruess; R.L. Hendrick; Mike F. Allen

2002-01-01

Root respiration rates have been shown to be correlated with temperature and root N concentration in studies of individual forest types or species, but it is not known how universal these relationships are across forest species adapted to widely different climatic and edaphic conditions. In order to test for broad, cross-species relationships, we measured fine root...

Automatic discrimination of fine roots in minirhizotron images.

PubMed

Zeng, Guang; Birchfield, Stanley T; Wells, Christina E

2008-01-01

Minirhizotrons provide detailed information on the production, life history and mortality of fine roots. However, manual processing of minirhizotron images is time-consuming, limiting the number and size of experiments that can reasonably be analysed. Previously, an algorithm was developed to automatically detect and measure individual roots in minirhizotron images. Here, species-specific root classifiers were developed to discriminate detected roots from bright background artifacts. Classifiers were developed from training images of peach (Prunus persica), freeman maple (Acer x freemanii) and sweetbay magnolia (Magnolia virginiana) using the Adaboost algorithm. True- and false-positive rates for classifiers were estimated using receiver operating characteristic curves. Classifiers gave true positive rates of 89-94% and false positive rates of 3-7% when applied to nontraining images of the species for which they were developed. The application of a classifier trained on one species to images from another species resulted in little or no reduction in accuracy. These results suggest that a single root classifier can be used to distinguish roots from background objects across multiple minirhizotron experiments. By incorporating root detection and discrimination algorithms into an open-source minirhizotron image analysis application, many analysis tasks that are currently performed by hand can be automated.

Biogeochemical cycling of Mg and its isotopes in a sugar maple forest in Québec

NASA Astrophysics Data System (ADS)

Kimmig, Sara R.; Holmden, Chris; Bélanger, Nicolas

2018-06-01

A Mg isotope study of sugar maple (Acer saccharum Marsh.) in a field site in southern Québec, Canada, and seedlings grown in sterile soil substrate in the laboratory, both demonstrate per mil level within-tree Mg isotope fractionation. However, only sugar maple seedlings grown in the laboratory fractionate Mg isotopes during uptake into fine roots, favoring heavy isotope enrichment in the plant compared to the growth medium. Absence of uptake-related Mg isotope fractionation in field stands of sugar maple is tentatively attributed to the activities of the arbuscular mycorrhizal fungi that colonize fine roots of the trees in the field, but were absent from the laboratory grown specimens. The fungi facilitate nutrient uptake for the tree, while the tree provides valuable carbohydrates to the fungi. Without the symbiotic fungi, pot-grown trees in the laboratory are visibly stressed and often die. The mechanisms responsible for Mg isotopic fractionation in stressed trees remain to be elucidated. Rivers are isotopically light compared to bedrock weathering sources of Mg, and this has bearing on the δ26Mg value of the continental weathering flux of Mg to the oceans, which is an important parameter in studies of ocean Mg cycling in the geological past. If uptake-related fractionation is negligible in many other naturally growing tree species, as it is in sugar maple, then forest growth will exert little or no influence on the δ26Mg value of the export flux of Mg to first-order streams and rivers, and in turn the ocean Mg cycle. Above the tree line, preferential retention of heavy Mg isotopes in clay minerals formed during silicate weathering has been linked to the low δ26Mg values in rivers. In the forested catchment of this study there is no clear evidence for these effects. The 1 N HNO3 leach of the Bf-BC and C mineral soils, which are often used to identify minerals that may be releasing Mg and other base cations to plant-available pools, have the same average δ26Mg value (-0.66‰, n = 2) as the litter layer and exchangeable leach of the forest floor, all soil solutions, and the stream (-0.63 ± 0.17‰ 2σ, n = 23). More revealing is the molar Mg/Ca ratio of the 1 N HNO3 treatment (0.17), which is nearly identical to the bulk Mg/Ca ratio of the aboveground biomass (0.14). We conclude that the 1 N HNO3 leach in this setting releases Mg from secondary minerals, such as vermiculite, other clays, and amorphous phases, which have taken up plant-recycled Mg and Ca that has filtered down through the soil from the litter layer of the forest floor. A single mineral, chlorite, with an estimated δ26Mg value of -0.78‰, appears to be responsible for supplying most of the Mg that is circulating between the forest and soils in this setting, which is weathered and cached over timescales of thousands of years.

Effects of Crown Scorch on Longleaf Pine Fine Roots

Treesearch

Mary Anne Sword; James D. Haywood

1999-01-01

Photosynthate production is reduced by foliage loss. Thus, scorch-induced decreases in the leaf area of longleaf pine (Pinus palustris Mill.) may reduce photosynthate allocation to roots. In this investigation the root carbohydrate concentrations and dynamics of longleaf pine after two intensities of prescribed burning were monitored. In...

Single Plant Root System Modeling under Soil Moisture Variation

NASA Astrophysics Data System (ADS)

Yabusaki, S.; Fang, Y.; Chen, X.; Scheibe, T. D.

2016-12-01

A prognostic Virtual Plant-Atmosphere-Soil System (vPASS) model is being developed that integrates comprehensively detailed mechanistic single plant modeling with microbial, atmospheric, and soil system processes in its immediate environment. Three broad areas of process module development are targeted: Incorporating models for root growth and function, rhizosphere interactions with bacteria and other organisms, litter decomposition and soil respiration into established porous media flow and reactive transport models Incorporating root/shoot transport, growth, photosynthesis and carbon allocation process models into an integrated plant physiology model Incorporating transpiration, Volatile Organic Compounds (VOC) emission, particulate deposition and local atmospheric processes into a coupled plant/atmosphere model. The integrated plant ecosystem simulation capability is being developed as open source process modules and associated interfaces under a modeling framework. The initial focus addresses the coupling of root growth, vascular transport system, and soil under drought scenarios. Two types of root water uptake modeling approaches are tested: continuous root distribution and constitutive root system architecture. The continuous root distribution models are based on spatially averaged root development process parameters, which are relatively straightforward to accommodate in the continuum soil flow and reactive transport module. Conversely, the constitutive root system architecture models use root growth rates, root growth direction, and root branching to evolve explicit root geometries. The branching topologies require more complex data structures and additional input parameters. Preliminary results are presented for root model development and the vascular response to temporal and spatial variations in soil conditions.

Combined effects of thinning and decline on fine root dynamics in a Quercus robur L. forest adjoining the Italian Pre-Alps.

PubMed

Mosca, E; Montecchio, L; Barion, G; Dal Cortivo, C; Vamerali, T

2017-05-01

Oak decline is a complex phenomenon, characterized by symptoms of canopy transparency, bark cracks and root biomass reduction. Root health status is one of the first stress indicators, and root turnover is a key process in plant adaptation to unfavourable conditions. In this study, the combined effects of decline and thinning were evaluated on fine root dynamics in an oak forest adjoining the Italian Pre-Alps by comparison of acute declining trees with non-declining trees, both with and without thinning treatment of surrounding trees. Dynamics of volumetric root length density (RLD V ) and tip density (RTD V ), root tip density per unit length of root (RTD L ), diameter, branching index (BI) and mycorrhizal colonization were monitored by soil coring over 2 years as possible descriptors of decline. At the beginning of the experiment, the relationship between canopy transparency and root status was weak, declining trees having slightly lower RLD V (-20 %) and RTD V (-11 %). After a 1 year lag, during which the parameters were almost unaffected, BI and RLD V , together with tip density, tip vitality and mycorrhizal colonization, became the descriptors most representative of both decline class and thinning. Thinning of declining trees increased RLD V (+12 %) and RTD V (+32 %), but reduced tip mycorrhizal colonization and vitality over time compared with non-thinned trees, whereas the opposite occurred in healthy trees, together with a marked decrease in branching. After thinning, there was an initial reduction in the structure of the ectomycorrhizal community, although recovery occurred about 10 months later, regardless of decline severity. Decline causes losses of fine root length, and a moderate recovery can be achieved by thinning, allowing better soil exploration by oak roots. The close correlation between root vitality and mycorrhizal colonization and their deterioration after thinning indicates that decline does not benefit from reduced root competition, excluding the hypothesis of limited water and nutrient availability as a possible cause of the syndrome in this forest. © The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com

Combined effects of thinning and decline on fine root dynamics in a Quercus robur L. forest adjoining the Italian Pre-Alps

PubMed Central

Montecchio, L.; Barion, G.; Dal Cortivo, C.; Vamerali, T.

2017-01-01

Abstract Aims Oak decline is a complex phenomenon, characterized by symptoms of canopy transparency, bark cracks and root biomass reduction. Root health status is one of the first stress indicators, and root turnover is a key process in plant adaptation to unfavourable conditions. In this study, the combined effects of decline and thinning were evaluated on fine root dynamics in an oak forest adjoining the Italian Pre-Alps by comparison of acute declining trees with non-declining trees, both with and without thinning treatment of surrounding trees. Methods Dynamics of volumetric root length density (RLDV) and tip density (RTDV), root tip density per unit length of root (RTDL), diameter, branching index (BI) and mycorrhizal colonization were monitored by soil coring over 2 years as possible descriptors of decline. Key Results At the beginning of the experiment, the relationship between canopy transparency and root status was weak, declining trees having slightly lower RLDV (–20 %) and RTDV (–11 %). After a 1 year lag, during which the parameters were almost unaffected, BI and RLDV, together with tip density, tip vitality and mycorrhizal colonization, became the descriptors most representative of both decline class and thinning. Thinning of declining trees increased RLDV (+12 %) and RTDV (+32 %), but reduced tip mycorrhizal colonization and vitality over time compared with non-thinned trees, whereas the opposite occurred in healthy trees, together with a marked decrease in branching. After thinning, there was an initial reduction in the structure of the ectomycorrhizal community, although recovery occurred about 10 months later, regardless of decline severity. Conclusions Decline causes losses of fine root length, and a moderate recovery can be achieved by thinning, allowing better soil exploration by oak roots. The close correlation between root vitality and mycorrhizal colonization and their deterioration after thinning indicates that decline does not benefit from reduced root competition, excluding the hypothesis of limited water and nutrient availability as a possible cause of the syndrome in this forest. PMID:28334145

The Integrated Role of Water Availability, Nutrient Dynamics, and Xylem Hydraulic Dysfunction on Plant Rooting Strategies in Managed and Natural Ecosystems

NASA Astrophysics Data System (ADS)

Mackay, D. S.; Savoy, P.; Pleban, J. R.; Tai, X.; Ewers, B. E.

2015-12-01

Plants adapt or acclimate to changing environments in part by allocating biomass to roots and leaves to strike a balance between water and nutrient uptake requirements on the one hand and growth and hydraulic safety on the other hand. In a recent study examining experimental drought with the TREES model, which couples plant ecophysiology with rhizosphere-and-xylem hydraulics, we hypothesized that the asynchronous nature of soil water availability and xylem repair supported root-to-leaf area (RLA) proportionality that favored long-term survival over short-term carbon gain or water use. To investigate this as a possible general principal of plant adjustment to changing environmental conditions, TREES was modified to allocate carbon to fine and coarse roots organized in ten orders differing in biomass allocated per unit absorbing root area, root lifespan, and total absorbing root area in each of several soil-root zones with depth. The expanded model allowed for adjustment of absorbing root area and rhizosphere volume based on available carbohydrate production and nitrogen (N) availability, resulting in dynamic expansion and contraction of the supply-side of the rhizosphere-plant hydraulics and N uptake capacity in response to changing environmental conditions and plant-environment asynchrony. The study was conducted partly in a controlled experimental setting with six genotypes of a widely grown crop species, Brassica rapa. The implications for forests were investigated in controlled experiments and at Fluxnet sites representing temperate mixed forests, semi-arid evergreen needle-leaf, and Mediterranean biomes. The results showed that the effects of N deficiency on total plant growth was modulated by a relative increase in fine root biomass representing a larger absorbing root volume per unit biomass invested. We found that the total absorbing root area per unit leaf area was consistently lower than that needed to maximize short-term water uptake and carbohydrate gain. Moreover, the acclimated RLA fell within a small range for both crops and trees despite changing environmental conditions, demonstrating an adaptation that was consistent with empiricism on fine roots and thus pointing to a fundamental connection between ecological and hydrological processes.

Investigating niche partitioning of ectomycorrhizal fungi in specialized rooting zones of the monodominant leguminous tree Dicymbe corymbosa.

PubMed

Smith, Matthew E; Henkel, Terry W; Williams, Gwendolyn C; Aime, M Catherine; Fremier, Alexander K; Vilgalys, Rytas

2017-07-01

Temperate ectomycorrhizal (ECM) fungi show segregation whereby some species dominate in organic layers and others favor mineral soils. Weak layering in tropical soils is hypothesized to decrease niche space and therefore reduce the diversity of ectomycorrhizal fungi. The Neotropical ECM tree Dicymbe corymbosa forms monodominant stands and has a distinct physiognomy with vertical crown development, adventitious roots and massive root mounds, leading to multi-stemmed trees with spatially segregated rooting environments: aerial litter caches, aerial decayed wood, organic root mounds and mineral soil. We hypothesized that these microhabitats host distinct fungal assemblages and therefore promote diversity. To test our hypothesis, we sampled D. corymbosa ectomycorrhizal root tips from the four microhabitats and analyzed community composition based on pyrosequencing of fungal internal transcribed spacer (ITS) barcode markers. Several dominant fungi were ubiquitous but analyses nonetheless suggested that communities in mineral soil samples were statistically distinct from communities in organic microhabitats. These data indicate that distinctive rooting zones of D. corymbosa contribute to spatial segregation of the fungal community and likely enhance fungal diversity. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Comparison of different methods for the in situ measurement of forest litter moisture content

NASA Astrophysics Data System (ADS)

Schunk, C.; Ruth, B.; Leuchner, M.; Wastl, C.; Menzel, A.

2015-06-01

Dead fine fuel (e.g. litter) moisture content is an important parameter for both forest fire and ecological applications as it is related to ignitability, fire behavior as well as soil respiration. However, the comprehensive literature review in this paper shows that there is no easy-to-use method for automated measurements available. This study investigates the applicability of four different sensor types (permittivity and electrical resistance measuring principles) for this measurement. Comparisons were made to manual gravimetric reference measurements carried out almost daily for one fire season and overall agreement was good (highly significant correlations with 0.792 ≦ r ≦ 0.947). Standard deviations within sensor types were linearly correlated to daily sensor mean values; however, above a certain threshold they became irregular, which may be linked to exceedance of the working ranges. Thus, measurements with irregular standard deviations were considered unusable and calibrations of all individual sensors were compared for useable periods. A large drift in the sensor raw value-litter moisture-relationship became obvious from drought to drought period. This drift may be related to installation effects or settling and decomposition of the litter layer throughout the fire season. Because of the drift and the in situ calibration necessary, it cannot be recommended to use the methods presented here for monitoring purposes. However, they may be interesting for scientific studies when some manual fuel moisture measurements are made anyway. Additionally, a number of potential methodological improvements are suggested.

Impact of post-mining subsidence on nitrogen transformation in southern tropical dry deciduous forest, India

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tripathi, N.; Singh, R.S.; Singh, J.S.

The goal of our research was to assess the impact of post-mining land subsidence, caused due to underground coal mining operations, on fine root biomass and root tips count; plant available nutrient status, microbial biomass N (MBN) and N-mineralization rates of a Southern tropical dry deciduous forest of Singareni Coalfields of India. The changes were quantified in all the three (rainy, winter and summer) seasons, in slope and depression microsites of the subsided land and an adjacent undamaged forest microsite. Physico-chemical characteristics were found to be altered after subsidence, showing a positive impact of subsidence on soil moisture, bulk density,more » water holding capacity, organic carbon content, total N and total P. The increase in all the parameters was found in depression microsites, while in slope microsites, the values were lower. Fine root biomass and root tips count increased in the subsided depression microsites, as demonstrated by increases of 62% and 45%, respectively. Soil nitrate-N and phosphate-P concentrations were also found to be higher in depression microsite, showing an increase of 35.68% and 24.74%, respectively. Depression microsite has also shown the higher MBN value with an increase over control. Net nitrification, net N-mineralization and MBN were increased in depression microsite by 29.77%, 25.72% and 34%, respectively. There was a positive relation of microbial N with organic C, fine root biomass and root tips.« less

Effect of organic matter and roots in soil respiration in a Mediterranean riparian areas in Central Spain

NASA Astrophysics Data System (ADS)

Gonzalez-Garrido, Laura; Delgado, Juan Antonio; Martinez, Teodora

2010-05-01

Soil respiration is one of the largest carbon flux components within terrestrial ecosystems, and small changes in the magnitude of soil respiration could have a large effect on the concentration of CO2 in the atmosphere. The main objective is evaluating the factors controlling soil respiration on the global carbon cycle in riparian areas of Henares River. We evaluated total soil respiration as it was affected by soil temperature, soil moisture, root respiration and organic matter in four areas differing in vegetation cover. We specifically assessed the contribution of soil organic matter and fine root biomass (≤1 mm.) in soil carbon dioxide flux. The study area is located on the riverbanks of Henares River where it passes through the municipal term of Alcala de Henares (Madrid) in Central Spain. Measurements were performed in spring and autumn of 2009. The study was conducted on four different types of riparian vegetation: natural Mediterranean riparian forest, reforestation of 1994, reforestation of 1999 and riparian grassland without trees. In each area of study 3, 25x25 m, plots were delimited and within each plot three sampling units of 50x50 cm were selected at random. The temperature of the ground was taken during the measures from respiration using a Multi-thermometer (-50°C - +300°C) at 5 cm depth. The moisture content of the ground was measured at 5 cm of depth with a HH2 Moisture meter (Delta Devices, Cambridge, UK). The measures of respiration of the ground were realised in field by means of LCI portable (LC pro ADC Bioscientific, Ltd. UK) connected to a ground respiration camera. We introduced the camera 3 cm into the soil just after eliminating the vegetation grass of the surface of measurement cutting carefully the aerial part, without damaging the roots. Soil CO2 flux measurements were registered after stabilization. Immediately after CO2 measurements, we obtained soil samples by means of a drill of 2.18 cm of diameter taking samples to 10 cm and 20 cm depth. Soil samples were dried to the air with the aim of preserving the roots the sample contained. They were extracted manually by means of very fine tweezers. We separate roots by diameter (Fine roots ≤ 1mm; rest of roots > 1mm) and dead from alive using texture and colour as clues. Finally the dry weight of roots was taking with a precision balance +-0.0001. Soil organic matter to 10 and 20 cm of depth were measure in laboratory using the method of Walkley and Black (1934). Differences in Soil CO2 flux, organic matter, fine root biomass, temperature and moisture between areas were analyzed using one-way ANOVAs. Our results suggest that fine root biomass present a larger impact than soil organic matter in soil CO2 flux values. Natural riparian forest presented higher values of soil CO2 flux than the rest of areas even when differences in root biomass and soil organic matter were controlled. Between the grassy area and both reforestations there were no differences in soil CO2 flux. In addition, we found that soil CO2 flux in our study area was more affected by soil temperature than by moisture, which could be relevant in the interpretation of the possible effects of global change. Key words: riparian forest, fine roots, carbon cycle, soil CO2 flux, root respiration. Acknowledgements: Research projects, n°FP08-AG02 IMIDRA and RTA 2006-00101-00-00 INIA and predoctoral scholarship FPI-INIA.

Root Morphology Was Improved in a Late-Stage Vigor Super Rice Cultivar.

PubMed

Huang, Min; Chen, Jiana; Cao, Fangbo; Jiang, Ligeng; Zou, Yingbin

2015-01-01

This study aimed to test the hypothesis that root morphology might be improved and consequently contributing to superior post-heading shoot growth and grain yield in late-stage vigor super rice. A pot experiment was carried out to compare yield attributes, shoot growth and physiological properties and root morphological traits between a late-stage vigor super rice cultivar (Y-liangyou 087) and an elite rice cultivar (Teyou 838). Grain yield and total shoot biomass were 7-9% higher in Y-liangyou 087 than in Teyou 838. Y-liangyou 087 had 60-64% higher post-heading shoot growth rate and biomass production than Teyou 838. Average relative chlorophyll concentration and net photosynthetic rate in flag leaves were 7-11% higher in Y-liangyou 087 than in Teyou 838 during heading to 25 days after heading. Y-liangyou 087 had 41% higher post-heading shoot N uptake but 17-25% lower root biomass and root-shoot ratio at heading and maturity than Teyou 838. Specific root length and length and surface area of fine roots were higher in Y-liangyou 087 than in Teyou 838 at heading and maturity by more than 15%. These results indicated that root-shoot relationships were well balanced during post-heading phase in the late-stage vigor super rice cultivar Y-liangyou 087 by improving root morphology including avoiding a too great root biomass and developing a large fine root system.

Advancing the use of minirhizotrons in wetlands

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iversen, Colleen M; Murphy, Meaghan T.; Allen, Michael F.

Background: Wetlands store a substantial amount of carbon (C) in deep soil organic matter deposits, and play an important role in global fluxes of carbon dioxide and methane. Fine roots (i.e., ephemeral roots that are active in water and nutrient uptake) are recognized as important components of biogeochemical cycles in nutrient-limited wetland ecosystems. However, quantification of fine-root dynamics in wetlands has generally been limited to destructive approaches, possibly because of methodological difficulties associated with the unique environmental, soil, and plant community characteristics of these systems. Non-destructive minirhizotron technology has rarely been used in wetland ecosystems. Scope: Our goal was tomore » develop a consensus on, and a methodological framework for, the appropriate installation and use of minirhizotron technology in wetland ecosystems. Here, we discuss a number of potential solutions for the challenges associated with the deployment of minirhizotron technology in wetlands, including minirhizotron installation and anchorage, capture and analysis of minirhizotron images, and upscaling of minirhizotron data for analysis of biogeochemical pools and parameterization of land surface models. Conclusions: The appropriate use of minirhizotron technology to examine relatively understudied fine-root dynamics in wetlands will advance our knowledge of ecosystem C and nutrient cycling in these globally important ecosystems.« less

Concentrations and flux measurements of volatile organic compounds (VOC) in boreal forest soil

NASA Astrophysics Data System (ADS)

Mäki, Mari; Aaltonen, Hermanni; Heinonsalo, Jussi; Hellén, Heidi; Pumpanen, Jukka; Bäck, Jaana

2017-04-01

Volatile organic compounds (VOC) impact soil processes as VOCs transmit signals between roots and rhizosphere (Ditengou et al., 2015), VOCs can regulate microbial activity (Asensio et al., 2012), and VOCs can also promote root growth (Hung et al., 2012). Belowground concentrations of VOCs have not been measured in situ and for this reason, knowledge of how different soil organisms such as roots, rhizosphere and decomposers contribute to VOC production is limited. The aim of this study was to determine and quantify VOC fluxes and concentrations of different horizons from boreal forest soil. The VOC concentrations and fluxes were measured from Scots pine (Pinus sylvestris) forest soil at the SMEAR II station in southern Finland from 21th of April to 2nd of December in 2016. VOC fluxes were measured using dynamic (flow-through) chambers from five soil collars placed on five different locations. VOC concentrations were also measured in each location from four different soil horizons with the measurement depth 1-107 cm. VOCs were collected from underground gas collectors into the Tenax-Carbopack-B adsorbent tubes using portable pumps ( 100 ml min-1). The VOC concentrations and fluxes of isoprene, 11 monoterpenes, 13 sesquiterpenes and different oxygenated VOCs were measured. Sample tubes were analyzed using thermal desorption-gas chromatograph-mass spectrometry (TD-GC-MS). Soil temperature and soil water content were continuously monitored for each soil horizon. Our preliminary results show that the primary source of VOCs is organic soil layer and the contribution of mineral soil to the VOC formation is minor. VOC fluxes and concentrations were dominated by monoterpenes such as α-pinene, camphene, β-pinene, and Δ3-carene. Monoterpene concentration is almost 10-fold in organic soil compared to the deeper soil layers. However, the highest VOC fluxes on the soil surface were measured in October, whereas the monoterpene concentrations in organic soil were highest in July and August. Organic soil is formed by organic matter which contains energy rich compounds for microbial decomposition and fine root biomass is also highest in soil surface (Helmisaari et al., 2007). With these analyses, we aim at distinguishing the VOC sinks and sources in the soil layers and quantifying the potential role of VOC uptake by soil microbiota. Asensio, D., Yuste, J. C., Mattana, S., Ribas, À., Llusià, J., and Peñuelas, J.: Litter VOCs induce changes in soil microbial biomass C and N and largely increase soil CO2 efflux. Plant and soil, 360(1-2), 163-174, doi:10.1007/s11104-012-1220-9, 2012. Ditengou, F. A., Müller, A., Rosenkranz, M., Felten, J., Lasok, H., van Doorn, M. M., Legue, V., Palme, K., Schnitzler, J.-P., and Polle, A. Volatile signalling by sesquiterpenes from ectomycorrhizal fungi reprogrammes root architecture. Nature communications, 6:6279, doi:10.1038/ncomms7279, 2015. Helmisaari, H. S., Derome, J., Nöjd, P., & Kukkola, M.: Fine root biomass in relation to site and stand characteristics in Norway spruce and Scots pine stands. Tree Physiology, 27(10), 1493-1504, 2007. Hung, R., Lee, S., and Bennett, J. W.: Arabidopsis thaliana as a model system for testing the effect of Trichoderma volatile organic compounds. Fungal Ecology, 6(1), 19-26, doi:10.1016/j.funeco.2012.09.005, 2013.

Root desiccation and drought stress responses of bareroot Quercus rubra seedlings treated with a hydrophilic polymer root dip

Treesearch

Kent G. Apostol; Douglass F. Jacobs; R. Kasten Dumroese

2009-01-01

Root hydrogel, a hydrophilic polymer, has been used to improve transplanting success of bareroot conifer seedlings through effects on water holding capacity. We examined mechanisms by which Terra-sorb Fine Hydrogel reduces damage that occurs when roots of 1-year old, dormant northern red oak (Quercus rubra L.) were subjected to shortterm (1, 3, and 5...

Mechanical failure of fine root cortical cells initiates plant hydraulic decline during drought

USDA-ARS?s Scientific Manuscript database

Root systems perform the crucial task of absorbing water from the soil to meet the demands of a transpiring canopy. Roots are thought to operate like electrical fuses, which break when carrying an excessive load under conditions of drought stress. Yet the exact site and sequence of this dysfunction ...

PATTERNS OF ROOT GROWTH, TURNOVER, AND DISTRIBUTION IN DIFFERENT AGED PONDEROSA PINE STANDS

EPA Science Inventory

The objectives of this study are to examine the spatial distribution of roots in relation to canopy size and tree distribution, and to determine if rates of fine root production and turnover are similar in the different aged stands. During the fall of 1998, 54 clear plexiglass t...

CONTRIBUTIONS OF CURRENT YEAR PHOTOSYNTHATE TO FINE ROOTS ESTIMATED USING A 13C-DEPLETED CO2 SOURCE

EPA Science Inventory

The quantification of root turnover is necessary for a complete understanding of plant carbon (C) budgets, especially in terms of impacts of global climate change. To improve estimates of root turnover, we present a method to distinguish current- from prior-year allocation of ca...

FINE ROOT TURNOVER IN PONDEROSA PINE STANDS OF DIFFERENT AGES: FIRST-YEAR RESULTS

EPA Science Inventory

Root minirhizotron tubs were installed in two ponderosa pine (Pinus ponderosa Laws.) Stands of different ages to examine patterns of root growth and death. The old-growth site (OS) consists of a mixture of old (>250 years) and young trees (ca.45 yrs)< and is located near clamp S...

The ectomycorrhizal community of conifer stands on peat soils 12 years after fertilization with wood ash.

PubMed

Klavina, Darta; Pennanen, Taina; Gaitnieks, Talis; Velmala, Sannakajsa; Lazdins, Andis; Lazdina, Dagnija; Menkis, Audrius

2016-02-01

We studied long-term effects of fertilization with wood ash on biomass, vitality and mycorrhizal colonization of fine roots in three conifer forest stands growing in Vacciniosa turf. mel. (V), Myrtillosa turf. mel. (M) and Myrtillosa turf. mel./Caricoso-phragmitosa (MC) forest types on peat soils. Fertilization trials amounting 5 kg/m(2) of wood ash were established 12 years prior to this study. A total of 63 soil samples with roots were collected and analysed. Ectomycorrhizal (ECM) fungi in roots were identified by morphotyping and sequencing of the fungal internal transcribed spacer (ITS) region. In all forest types, fine root biomass was higher in fertilized plots than in control plots. In M forest type, proportion of living fine roots was greater in fertilized plots than in control plots, while in V and MC, the result was opposite. Fifty ECM species were identified, of which eight were common to both fertilized and control plots. Species richness and Shannon diversity index were generally higher in fertilized plots than in control plots. The most common species in fertilized plots were Amphinema byssoides (17.8%) and Tuber cf. anniae (12.2%), while in control plots, it was Tylospora asterophora (18.5%) and Lactarius tabidus (20.3%). Our results showed that forest fertilization with wood ash has long-lasting effect on diversity and composition of ECM fungal communities.

Improved representations of coupled soil–canopy processes in the CABLE land surface model (Subversion revision 3432)

DOE PAGES

Haverd, Vanessa; Cuntz, Matthias; Nieradzik, Lars P.; ...

2016-09-07

CABLE is a global land surface model, which has been used extensively in offline and coupled simulations. While CABLE performs well in comparison with other land surface models, results are impacted by decoupling of transpiration and photosynthesis fluxes under drying soil conditions, often leading to implausibly high water use efficiencies. Here, we present a solution to this problem, ensuring that modelled transpiration is always consistent with modelled photosynthesis, while introducing a parsimonious single-parameter drought response function which is coupled to root water uptake. We further improve CABLE's simulation of coupled soil–canopy processes by introducing an alternative hydrology model with amore » physically accurate representation of coupled energy and water fluxes at the soil–air interface, including a more realistic formulation of transfer under atmospherically stable conditions within the canopy and in the presence of leaf litter. The effects of these model developments are assessed using data from 18 stations from the global eddy covariance FLUXNET database, selected to span a large climatic range. Here, marked improvements are demonstrated, with root mean squared errors for monthly latent heat fluxes and water use efficiencies being reduced by 40 %. Results highlight the important roles of deep soil moisture in mediating drought response and litter in dampening soil evaporation.« less

Improved representations of coupled soil–canopy processes in the CABLE land surface model (Subversion revision 3432)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Haverd, Vanessa; Cuntz, Matthias; Nieradzik, Lars P.

CABLE is a global land surface model, which has been used extensively in offline and coupled simulations. While CABLE performs well in comparison with other land surface models, results are impacted by decoupling of transpiration and photosynthesis fluxes under drying soil conditions, often leading to implausibly high water use efficiencies. Here, we present a solution to this problem, ensuring that modelled transpiration is always consistent with modelled photosynthesis, while introducing a parsimonious single-parameter drought response function which is coupled to root water uptake. We further improve CABLE's simulation of coupled soil–canopy processes by introducing an alternative hydrology model with amore » physically accurate representation of coupled energy and water fluxes at the soil–air interface, including a more realistic formulation of transfer under atmospherically stable conditions within the canopy and in the presence of leaf litter. The effects of these model developments are assessed using data from 18 stations from the global eddy covariance FLUXNET database, selected to span a large climatic range. Here, marked improvements are demonstrated, with root mean squared errors for monthly latent heat fluxes and water use efficiencies being reduced by 40 %. Results highlight the important roles of deep soil moisture in mediating drought response and litter in dampening soil evaporation.« less

Improved representations of coupled soil-canopy processes in the CABLE land surface model (Subversion revision 3432)

NASA Astrophysics Data System (ADS)

Haverd, Vanessa; Cuntz, Matthias; Nieradzik, Lars P.; Harman, Ian N.

2016-09-01

CABLE is a global land surface model, which has been used extensively in offline and coupled simulations. While CABLE performs well in comparison with other land surface models, results are impacted by decoupling of transpiration and photosynthesis fluxes under drying soil conditions, often leading to implausibly high water use efficiencies. Here, we present a solution to this problem, ensuring that modelled transpiration is always consistent with modelled photosynthesis, while introducing a parsimonious single-parameter drought response function which is coupled to root water uptake. We further improve CABLE's simulation of coupled soil-canopy processes by introducing an alternative hydrology model with a physically accurate representation of coupled energy and water fluxes at the soil-air interface, including a more realistic formulation of transfer under atmospherically stable conditions within the canopy and in the presence of leaf litter. The effects of these model developments are assessed using data from 18 stations from the global eddy covariance FLUXNET database, selected to span a large climatic range. Marked improvements are demonstrated, with root mean squared errors for monthly latent heat fluxes and water use efficiencies being reduced by 40 %. Results highlight the important roles of deep soil moisture in mediating drought response and litter in dampening soil evaporation.

Mercury methylation in sediments of a Brazilian mangrove under different vegetation covers and salinities.

PubMed

de Oliveira, Diana Ciannella Martins; Correia, Raquel Rose Silva; Marinho, Claudio Cardoso; Guimarães, Jean Remy Davée

2015-05-01

The presence and formation of methylmercury (MMHg), a highly toxic form of Hg, in mangrove ecosystems is poorly studied. Therefore the aim of this study was to evaluate mercury methylation potentials in sediment, litter and root samples (Avicennia shaueriana and Spartina alterniflora) from different regions of a mangrove ecosystem, as well as the influence of salinity on methylation. Sediment was sampled under different depths and in mangrove regions with different plant covers and salinities. All samples were incubated with (203)Hg and MM(203)Hg was extracted and measured by liquid scintillation. MMHg was formed in all samples and sites tested including plant roots and litter. Higher Hg methylation was found in the superficial fraction of sediments (0.47-7.82%). Infralittoral sandy sediment had low MMHg formation (0.44-1.61%). Sediment under Rhizophora mangle had lower MMHg formation (0.018-2.23%) than under A. shaueriana (0.2-4.63%) and Laguncularia racemosa (0.08-7.82). MMHg formation in sediment tended to increase with salinity but the differences were not significant. Therefore, MMHg formation occurs in different sites of mangrove ecosystems and may be an important threat that requires further study. Copyright © 2015 Elsevier Ltd. All rights reserved.

Arbuscular mycorrhizas are present on Spitsbergen.

PubMed

Newsham, K K; Eidesen, P B; Davey, M L; Axelsen, J; Courtecuisse, E; Flintrop, C; Johansson, A G; Kiepert, M; Larsen, S E; Lorberau, K E; Maurset, M; McQuilkin, J; Misiak, M; Pop, A; Thompson, S; Read, D J

2017-10-01

A previous study of 76 plant species on Spitsbergen in the High Arctic concluded that structures resembling arbuscular mycorrhizas were absent from roots. Here, we report a survey examining the roots of 13 grass and forb species collected from 12 sites on the island for arbuscular mycorrhizal (AM) colonisation. Of the 102 individuals collected, we recorded AM endophytes in the roots of 41 plants of 11 species (Alopecurus ovatus, Deschampsia alpina, Festuca rubra ssp. richardsonii, putative viviparous hybrids of Poa arctica and Poa pratensis, Poa arctica ssp. arctica, Trisetum spicatum, Coptidium spitsbergense, Ranunculus nivalis, Ranunculus pygmaeus, Ranunculus sulphureus and Taraxacum arcticum) sampled from 10 sites. Both coarse AM endophyte, with hyphae of 5-10 μm width, vesicles and occasional arbuscules, and fine endophyte, consisting of hyphae of 1-3 μm width and sparse arbuscules, were recorded in roots. Coarse AM hyphae, vesicles, arbuscules and fine endophyte hyphae occupied 1.0-30.7, 0.8-18.3, 0.7-11.9 and 0.7-12.8% of the root lengths of colonised plants, respectively. Principal component analysis indicated no associations between the abundances of AM structures in roots and edaphic factors. We conclude that the AM symbiosis is present in grass and forb roots on Spitsbergen.

Quantitative Classification of Rice (Oryza sativa L.) Root Length and Diameter Using Image Analysis.

PubMed

Gu, Dongxiang; Zhen, Fengxian; Hannaway, David B; Zhu, Yan; Liu, Leilei; Cao, Weixing; Tang, Liang

2017-01-01

Quantitative study of root morphological characteristics of plants is helpful for understanding the relationships between their morphology and function. However, few studies and little detailed and accurate information of root characteristics were reported in fine-rooted plants like rice (Oryza sativa L.). The aims of this study were to quantitatively classify fine lateral roots (FLRs), thick lateral roots (TLRs), and nodal roots (NRs) and analyze their dynamics of mean diameter (MD), lengths and surface area percentage with growth stages in rice plant. Pot experiments were carried out during three years with three rice cultivars, three nitrogen (N) rates and three water regimes. In cultivar experiment, among the three cultivars, root length of 'Yangdao 6' was longest, while the MD of its FLR was the smallest, and the mean diameters for TLR and NR were the largest, the surface area percentage (SAP) of TLRs (SAPT) was the highest, indicating that Yangdao 6 has better nitrogen and water uptake ability. High N rate increased the length of different types of roots and increased the MD of lateral roots, decreased the SAP of FLRs (SAPF) and TLRs, but increased the SAP of NRs (SAPN). Moderate decrease of water supply increased root length and diameter, water stress increased the SAPF and SAPT, but decreased SAPN. The quantitative results indicate that rice plant tends to increase lateral roots to get more surface area for nitrogen and water uptake when available assimilates are limiting under nitrogen and water stress environments.

Quantitative Classification of Rice (Oryza sativa L.) Root Length and Diameter Using Image Analysis

PubMed Central

Gu, Dongxiang; Zhen, Fengxian; Hannaway, David B.; Zhu, Yan; Liu, Leilei; Cao, Weixing; Tang, Liang

2017-01-01

Quantitative study of root morphological characteristics of plants is helpful for understanding the relationships between their morphology and function. However, few studies and little detailed and accurate information of root characteristics were reported in fine-rooted plants like rice (Oryza sativa L.). The aims of this study were to quantitatively classify fine lateral roots (FLRs), thick lateral roots (TLRs), and nodal roots (NRs) and analyze their dynamics of mean diameter (MD), lengths and surface area percentage with growth stages in rice plant. Pot experiments were carried out during three years with three rice cultivars, three nitrogen (N) rates and three water regimes. In cultivar experiment, among the three cultivars, root length of ‘Yangdao 6’ was longest, while the MD of its FLR was the smallest, and the mean diameters for TLR and NR were the largest, the surface area percentage (SAP) of TLRs (SAPT) was the highest, indicating that Yangdao 6 has better nitrogen and water uptake ability. High N rate increased the length of different types of roots and increased the MD of lateral roots, decreased the SAP of FLRs (SAPF) and TLRs, but increased the SAP of NRs (SAPN). Moderate decrease of water supply increased root length and diameter, water stress increased the SAPF and SAPT, but decreased SAPN. The quantitative results indicate that rice plant tends to increase lateral roots to get more surface area for nitrogen and water uptake when available assimilates are limiting under nitrogen and water stress environments. PMID:28103264

Predicting moisture dynamics of fine understory fuels in a moist tropical rainforest system: results of a pilot study undertaken to identify proxy variables useful for rating fire danger.

PubMed

Ray, David; Nepstad, Dan; Brando, Paulo

2010-08-01

*The use of fire as a land management tool in the moist tropics often has the unintended consequence of degrading adjacent forest, particularly during severe droughts. Reliable models of fire danger are needed to help mitigate these impacts. *Here, we studied the moisture dynamics of fine understory fuels in the east-central Brazilian Amazon during the 2003 dry season. Drying stations established under varying amounts of canopy cover (leaf area index (LAI) = 0 - 5.3) were subjected to a range of water inputs (5-15 mm) and models were developed to forecast litter moisture content (LMC). Predictions were then compared with independent field data. *A multiple linear regression relating litter moisture content to forest structure (LAI), ambient vapor pressure deficit (VPD(M)) and an index of elapsed time since a precipitation event (d(-1)) was identified as the best-fit model (adjusted R(2) = 0.89). Relative to the independent observations, model predictions were relatively unbiased when the LMC was

Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits

DOE PAGES

Chase, Alexander B.; Karaoz, Ulas; Brodie, Eoin L.; ...

2017-11-14

Much genetic diversity within a bacterial community is likely obscured by microdiversity within operational taxonomic units (OTUs) defined by 16S rRNA gene sequences. However, it is unclear how variation within this microdiversity influences ecologically relevant traits. Here, we employ a multifaceted approach to investigate microdiversity within the dominant leaf litter bacterium,Curtobacterium, which comprises 7.8% of the bacterial community at a grassland site undergoing global change manipulations. We use cultured bacterial isolates to interpret metagenomic data, collectedin situover 2 years, together with lab-based physiological assays to determine the extent of trait variation within this abundant OTU. The response ofCurtobacteriumto seasonal variability andmore » the global change manipulations, specifically an increase in relative abundance under decreased water availability, appeared to be conserved across sixCurtobacteriumlineages identified at this site. Genomic and physiological analyses in the lab revealed that degradation of abundant polymeric carbohydrates within leaf litter, cellulose and xylan, is nearly universal across the genus, which may contribute to its high abundance in grassland leaf litter. However, the degree of carbohydrate utilization and temperature preference for this degradation varied greatly among clades. Overall, we find that traits withinCurtobacteriumare conserved at different phylogenetic depths. We speculate that similar to bacteria in marine systems, diverse microbes within this taxon may be structured in distinct ecotypes that are key to understandingCurtobacteriumabundance and distribution in the environment. IMPORTANCE. Despite the plummeting costs of sequencing, characterizing the fine-scale genetic diversity of a microbial community—and interpreting its functional importance—remains a challenge. Indeed, most studies, particularly studies of soil, assess community composition at a broad genetic level by classifying diversity into taxa (OTUs) defined by 16S rRNA sequence similarity. However, these classifications potentially obscure variation in traits that result in fine-scale ecological differentiation among closely related strains. Here, we investigated “microdiversity” in a highly diverse and poorly characterized soil system (leaf litter in a southern Californian grassland). Here, we focused on the most abundant bacterium,Curtobacterium, which by standard methods is grouped into only one OTU. We find that the degree of carbohydrate usage and temperature preference vary within the OTU, whereas its responses to changes in precipitation are relatively uniform. These results suggest that microdiversity may be key to understanding how soil bacterial diversity is linked to ecosystem functioning.« less

Exploratory Project: Rigid nanostructured organic polymer monolith for in situ collection and analysis of plant metabolites from soil matrices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tharayil, Nishanth

Plant metabolites released from litter leachates and root exudates enable plants to adapt and survive in a wide range of habitats by facilitating resource foraging and plant-organismal interactions, and could influence soil carbon storage. The biological functions of these plant inputs and the organismal interactions they facilitate in soil are strictly governed by their composition and molecular identity. Our current understanding about the molecular identity of exudates is based on physiological studies that are done in soil-less axenic cultures. On the other hand, ecological studies that rely on isotope labeling to track the fluxes of carbon from plants to soilmore » have found the complexities of soil-microbe matrices as an insurmountable barrier to undertake any meaningful molecular level characterization of plant inputs. Although it is constantly advocated to undertake a molecular level identification of the dynamicity of plant metabolites in soils, the complexity of soil system has thus far prevented any such endeavors. We developed polymeric probes through in-situ polymerization of poly(styrene-co-vinylbenzyl chloride-co-divinylbenzene) to elucidate the chemical environment of the soil to which the plant roots are exposed. Hypercrosslinking of the polymeric probes through an in-situ Friedel-Crafts alkylation significantly increased the surface area and the sorption capacity of the probes. Surface functionalization of the probes using a hybrid approach was also attempted. The efficacy of these probes was tested using batch equilibration. Scanning electron microscopy revealed extensive modification of the surface of the probes through hypercrosslinking. The probes exhibited a lower site specific sorption (slope of Freundlich adsorption isotherm close to unity) and percent recovery of the sorbed compounds from the probes were >70, indicating a predominance of reversible sorption. Further we imparted specificity to this copolymer matrix by using molecular-template imprinting approach for the selective capture of less abundant plant metabolites from a crowded soil/litter leachate. Our results suggests that i) the root exudate pattern of plants is highly dependent on the nutrient status of the plant, with greater specificity of root exudation occurring in growing medium with low available form of nutrients, ii) the chemical composition of root exudation is a function of the distance of sampling from the source-roots, with the composition of root exudation being more enriched in polar metabolites farther from the source-roots, iii) Further we demonstrated that the compounds present in real root exudates diffuse farther from the source roots than those in artificial root exudates that are traditionally used. Thus, our project highlights how the soil matrix is instrumental in modifying the chemical composition of root exudates, and highlights that, apart from the plant physiology, the specificity and function of root exudates is also modified by environmental factors.« less

An Experimental Study of the Effects of Litter and Duff Consumption and Ash Formation on Post-Fire Runoff.

NASA Astrophysics Data System (ADS)

Woods, S. W.; Balfour, V.

2007-12-01

Consumption of the litter and duff layers in forest wildfires can lead to substantial increases in the frequency and magnitude of overland flow. These increases result from the loss of storage in the organic surface layer, reduced surface roughness, and from sealing of the exposed mineral soil surface. The presence of an ash layer may accentuate surface sealing by providing an additional source of fine material, or it may reduce runoff by storing rainfall and by protecting the soil surface from raindrop impacts. We used simulated rainfall experiments to assess the effects of litter and duff consumption and the presence of ash layers of varying thickness on post fire runoff at two forested sites in western Montana, one with sandy loam soils formed out of granodiorite and the other with gravelly silt loam soils formed out of argillite. At each site we measured the runoff from simulated rainfall in replicated 0.5 m2 plots before and after application of the following treatments: 1) burning with a fuel load of 90 Mg ha-1, 2) manual removal of the litter and duff layers, 3) addition of 0.5, 2.5 and 5 cm of ash to plots from which the litter and duff had previously been removed, and 4) addition of the same depths of ash to burned plots at the sandy loam site. In the burned plots the surface litter and duff layers were completely consumed and a <1cm layer of black and gray ash and char was formed, indicating a moderate severity burn. The mean soil temperature in the upper 1 cm of the mineral soil was 70° C, and there was no detectable increase in water repellency. The mean final infiltration capacity of the burned sandy loam plots was 35 mm hr-1 compared to a pre-fire mean of 87 mm hr-1, while in the gravelly silt loam plots the pre- and post burn infiltration capacities (27 and 31 mm hr- 1) were not significantly different. Manual removal of the litter and duff layers reduced the mean final infiltration capacity in the sandy loam plots from 64 mm hr-1 to 40 mm hr-1 and in the gravelly silt loam plots from 23 mm hr-1 to 16 mm hr-1. We attribute decreases in infiltration due to the burning and duff removal treatments primarily to surface sealing. In the sandy loam plots, burning may have had a greater effect on infiltration than duff removal because the thin ash layer in the burned plots provided an additional source of fine material. In the gravelly silt loam plots, macropores located around rock fragments helped to minimize sealing effects. The addition of 0.5 cm of ash to the burned granitic plots resulted in a 20 mm hr-1 decrease in the final infiltration rate, and this was also probably due to surface sealing. However, the overall effect of ash addition was to increase the cumulative infiltration in proportion to the ash thickness and to maintain a higher average infiltration rate, indicating that while thin (<1 cm) ash layers may promote sealing, thicker ash layers help to reduce the runoff rate by providing additional storage for rainfall and by protecting the soil surface from raindrop impacts.

Shrubs stimulate heterotrophic respiration in arctic soils

NASA Astrophysics Data System (ADS)

Phillips, C. A.; Wurzburger, N.

2016-12-01

The response of arctic ecosystems to global change will have critical effects on future climate. Climate warming has already triggered the expansion of shrubs across tundra, raising questions about how shrubs will affect ecosystem carbon balance. Shrub litter quality and mycorrhizal symbionts may accelerate the activity of soil microorganisms that facilitate the release of large stores of soil carbon. We investigated how shrubs affect the activity of soil microorganisms by creating soil mesocosms from areas with and without shrub species as dominants of the plant community in arctic Alaska. We hypothesized that relative to their non-shrub counterparts, heterotrophic respiration of shrub soils would: (1) be greater, (2) demonstrate greater response to additions of shrub litter, and (3) be less nutrient limited. We created mesocosms with root-free soils at constant moisture and temperature, and quantified basal heterotrophic soil respiration rates, and the response of respiration to litter and nutrient inputs in a series of laboratory experiments inputs. (1) We found that the presence of shrubs generally produced higher rates of basal soil respiration in both horizons, suggesting that shrubs stimulate microbial activity. (2) Litter addition increased respiration across both horizons with no differences in response between shrub and non-shrub soils. (3) N additions did not increase heterotrophic respiration, but P and N+P additions induced a short respiratory pulse in all soils, suggesting mild P limitation. Collectively, these findings provide evidence that shrubs stimulate heterotrophic microbial activity to enhance carbon loss, but generate new questions about the mechanisms driving these patterns.

Herbicides in vineyards reduce grapevine root mycorrhization and alter soil microorganisms and the nutrient composition in grapevine roots, leaves, xylem sap and grape juice.

PubMed

Zaller, Johann G; Cantelmo, Clemens; Santos, Gabriel Dos; Muther, Sandrina; Gruber, Edith; Pallua, Paul; Mandl, Karin; Friedrich, Barbara; Hofstetter, Ingrid; Schmuckenschlager, Bernhard; Faber, Florian

2018-06-03

Herbicides are increasingly applied in vineyards worldwide. However, not much is known on potential side effects on soil organisms or on the nutrition of grapevines (Vitis vinifera). In an experimental vineyard in Austria, we examined the impacts of three within-row herbicide treatments (active ingredients: flazasulfuron, glufosinate, glyphosate) and mechanical weeding on grapevine root mycorrhization; soil microorganisms; earthworms; and nutrient concentration in grapevine roots, leaves, xylem sap and grape juice. The three herbicides reduced grapevine root mycorrhization on average by 53% compared to mechanical weeding. Soil microorganisms (total colony-forming units, CFU) were significantly affected by herbicides with highest CFUs under glufosinate and lowest under glyphosate. Earthworms (surface casting activity, density, biomass, reproduction) or litter decomposition in soil were unaffected by herbicides. Herbicides altered nutrient composition in grapevine roots, leaves, grape juice and xylem sap that was collected 11 months after herbicide application. Xylem sap under herbicide treatments also contained on average 70% more bacteria than under mechanical weeding; however, due to high variability, this was not statistically significant. We conclude that interdisciplinary approaches should receive more attention when assessing ecological effects of herbicides in vineyard ecosystems.

Comparison of mandibular first molar mesial root canal morphology using micro-computed tomography and clearing technique.

PubMed

Kim, Yeun; Perinpanayagam, Hiran; Lee, Jong-Ki; Yoo, Yeon-Jee; Oh, Soram; Gu, Yu; Lee, Seung-Pyo; Chang, Seok Woo; Lee, Woocheol; Baek, Seung-Ho; Zhu, Qiang; Kum, Kee-Yeon

2015-08-01

Micro-computed tomography (MCT) with alternative image reformatting techniques shows complex and detailed root canal anatomy. This study compared two-dimensional (2D) and 3D MCT image reformatting with standard tooth clearing for studying mandibular first molar mesial root canal morphology. Extracted human mandibular first molar mesial roots (n=31) were scanned by MCT (Skyscan 1172). 2D thin-slab minimum intensity projection (TS-MinIP) and 3D volume rendered images were constructed. The same teeth were then processed by clearing and staining. For each root, images obtained from clearing, 2D, 3D and combined 2D and 3D techniques were examined independently by four endodontists and categorized according to Vertucci's classification. Fine anatomical structures such as accessory canals, intercanal communications and loops were also identified. Agreement among the four techniques for Vertucci's classification was 45.2% (14/31). The most frequent were Vertucci's type IV and then type II, although many had complex configurations that were non-classifiable. Generally, complex canal systems were more clearly visible in MCT images than with standard clearing and staining. Fine anatomical structures such as intercanal communications, accessory canals and loops were mostly detected with a combination of 2D TS-MinIP and 3D volume-rendering MCT images. Canal configurations and fine anatomic structures were more clearly observed in the combined 2D and 3D MCT images than the clearing technique. The frequency of non-classifiable configurations demonstrated the complexity of mandibular first molar mesial root canal anatomy.

Soil properties and root biomass responses to prescribed burning in young Corsican pine (Pinus nigra Arn.) stands.

PubMed

Tufekcioglu, Aydin; Kucuk, Mehmet; Saglam, Bulent; Bilgili, Ertugrul; Altun, Lokman

2010-05-01

Fire is an important tool in the management of forest ecosystems. Although both prescribed and wildland fires are common in Turkey, few studies have addressed the influence of such disturbances on soil properties and root biomass dynamics. In this study, soil properties and root biomass responses to prescribed fire were investigated in 25-year-old corsican pine (Pinus nigra Arn.) stands in Kastamonu, Turkey. The stands were established by planting and were subjected to prescribed burning in July 2003. Soil respiration rates were determined every two months using soda-lime method over a two-year period. Fine (0-2 mm diameter) and small root (2-5 mm diameter) biomass were sampled approximately bimonthly using sequential coring method. Mean daily soil respiration ranged from 0.65 to 2.19 g Cm(-2) d(-1) among all sites. Soil respiration rates were significantly higher in burned sites than in controls. Soil respiration rates were correlated significantly with soil moisture and soil temperature. Fine root biomass was significantly lower in burned sites than in control sites. Mean fine root biomass values were 4940 kg ha(-1) for burned and 5450 kg ha(-1) for control sites. Soil pH was significantly higher in burned sites than in control sites in 15-35 cm soil depth. Soil organic matter content did not differ significantly between control and burned sites. Our results indicate that, depending on site conditions, fire could be used successfully as a tool in the management of forest stands in the study area.

Seasonal Fine-Root Carbohydrate and Growth Relations of Plantation Loblolly Pine After Thinning and Fertilization

Treesearch

Eric A. Kuehler; Mary Anne Sword; C. Dan Andries

1999-01-01

In 1989, two levels each of stand density and fertilization were established in an 8-year-old loblolly pine (Pinus taeda L.) plantation. In March 1995, treatments were reapplied, and root elongation and carbohydrate concentrations were monitored for 2 years. Our objective was to evaluate relationships between seasonal root growth and carbohydrate...

Influence of housing system, grain type, and particle size on Salmonella colonization and shedding of broilers fed triticale or corn-soybean meal diets.

PubMed

Santos, F B O; Sheldon, B W; Santos, A A; Ferket, P R

2008-03-01

Salmonella colonization in poultry may be influenced by grain type and particle size. Broilers reared either in nonlitter cage-based housing or in a conventionally floored litter house from 0 to 42 d were assigned to 1 of 4 dietary treatments: 1) ground corn-soybean meal (C, 560 microm), 2) coarsely ground corn-soybean meal (CC, >1,700 microm), 3) ground triticale-soybean meal (T, 560 microm), or 4) whole triticale-soybean meal (WT). A 4-strain cocktail of Salmonella enterica was orally gavaged into each chick at placement. Growth performance, cecal and fecal Salmonella populations, gizzard and proventriculus pH, intestinal size, jejunum histomorphometry, and carcass yields were measured. Broilers responded differently to the dietary treatments according to the housing system used. At 42 d, birds reared on litter and fed ground grain had greater BW than those fed coarse grain (2.87 vs. 2.71 kg), whereas cage-reared broilers fed ground triticale were heavier than those fed corn (2.75 vs. 2.64 kg). Broilers raised on litter had a better feed conversion ratio than those raised in cages (1.71 vs. 1.81 g/g). Independent of the housing system, relative eviscerated carcass weights of birds fed T and C were heavier than those of CC- and WT-fed broilers (762 vs. 752 g/kg). Generally, the jejunum villus area and mucosal depth were larger, whereas the small intestine was lighter and shorter in broilers raised on litter. Relative gizzard weights of broilers raised on litter and fed the coarser diets were heavier than those of broilers reared in cages and fed finely ground diets. Feeding whole or coarsely ground grains decreased cecal Salmonella populations in 42-d-old broilers (3.8, 3.9, 4.4, and 4.4 log most probable number/g for CC, WT, C, and T, respectively). Additionally, 42-d-old broilers reared on litter had lower cecal Salmonella populations than those in cages (3.8 vs. 4.4 log most probable number/g). In conclusion, as a feed ingredient, triticale is a good alternative to corn, resulting in improved BW and reduced Salmonella colonization. Broilers raised on litter may have achieved lower cecal Salmonella populations than caged birds because access to litter may have modulated the intestinal microflora by increasing competitive exclusion microorganisms, which discouraged Salmonella colonization.

X-ray computed tomography uncovers root-root interactions: quantifying spatial relationships between interacting root systems in three dimensions.

PubMed

Paya, Alexander M; Silverberg, Jesse L; Padgett, Jennifer; Bauerle, Taryn L

2015-01-01

Research in the field of plant biology has recently demonstrated that inter- and intra-specific interactions belowground can dramatically alter root growth. Our aim was to answer questions related to the effect of inter- vs. intra-specific interactions on the growth and utilization of undisturbed space by fine roots within three dimensions (3D) using micro X-ray computed tomography. To achieve this, Populus tremuloides (quaking aspen) and Picea mariana (black spruce) seedlings were planted into containers as either solitary individuals, or inter-/intra-specific pairs, allowed to grow for 2 months, and 3D metrics developed in order to quantify their use of belowground space. In both aspen and spruce, inter-specific root interactions produced a shift in the vertical distribution of the root system volume, and deepened the average position of root tips when compared to intra-specifically growing seedlings. Inter-specific interactions also increased the minimum distance between root tips belonging to the same root system. There was no effect of belowground interactions on the radial distribution of roots, or the directionality of lateral root growth for either species. In conclusion, we found that significant differences were observed more often when comparing controls (solitary individuals) and paired seedlings (inter- or intra-specific), than when comparing inter- and intra-specifically growing seedlings. This would indicate that competition between neighboring seedlings was more responsible for shifting fine root growth in both species than was neighbor identity. However, significant inter- vs. intra-specific differences were observed, which further emphasizes the importance of biological interactions in competition studies.

Does the increased air humidity affect soil respiration and carbon stocks?

NASA Astrophysics Data System (ADS)

Kukumägi, Mai; Celi, Luisella; Said-Pullicino, Daniel; Kupper, Priit; Sõber, Jaak; Lõhmus, Krista; Kutti, Sander; Ostonen, Ivika

2013-04-01

Climate manipulation experiments at ecosystem-scale enable us to simulate, investigate and predict changes in carbon balance of forest ecosystems. Considering the predicted increase in air humidity and precipitation for northern latitudes, this work aimed at investigating the effect of increased air humidity on soil respiration, distribution of soil organic matter (SOM) among pools having different turnover times, and microbial, fine root and rhizome biomass. The study was carried out in silver birch (Betula pendula Roth.) and hybrid aspen (Populus tremula L. × P. tremuloides Michx.) stands in a Free Air Humidity Manipulation (FAHM) experimental facility containing three humidified (H; on average 7% above current ambient levels since 2008) and three control (C) plots. Soil respiration rates were measured monthly during the growing season using a closed dynamic chamber method. Density fractionation was adopted to separate SOM into two light fractions (free and aggregate-occluded particulate organic matter, fPOM and oPOM respectively), and one heavy fraction (mineral-associated organic matter, MOM). The fine root and rhizome biomass and microbial data are presented for silver birch stands only. In 2011, after 4 growing seasons of humidity manipulation soil organic carbon contents were significantly higher in C plots than H plot (13.5 and 12.5 g C kg-1, respectively), while soil respiration tended to be higher in the latter. Microbial biomass and basal respiration were 13 and 14% higher in H plots than in the C plots, respectively. Twice more fine roots of trees were estimated in H plots, while the total fine root and rhizome biomass (tree + understory) was similar in C and H plots. Fine root turnover was higher for both silver birch and understory roots in H plots. Labile SOM light fractions (fPOM and oPOM) were significantly smaller in H plots with respect to C plots (silver birch and hybrid aspen stands together), whereas no differences were observed in the contents of the more stable MOM. These results strongly suggest that, apart from the predicted increase in temperature and atmospheric carbon and nitrogen concentrations, an increase in free air humidity as a result of climate change may significantly influence the complex belowground carbon cycling by affecting biomass production, soil respiration and organic matter turnover.

Effects of increased biomass removal on the biogeochemistry of two Norwegian forest ecosystems

NASA Astrophysics Data System (ADS)

Lange, H.; Clarke, N.; Kjønaas, O. J.; Aas, W.; Andreassen, K.; Børja, I.; Bratli, H.; Eich-Greatorex, S.; Eldhuset, T.; Holt-Hanssen, K.

2009-04-01

Increased removal of biomass from forested ecosystems for use as an alternative source of energy is an option in several countries. E.g., it is planned to double the use of bioenergy from all sources until 2020 in Norway. A large fraction of this increase is coming from forest resources, e.g. by removing harvest residues like branches and tops. This removal will reduce the supply of nutrients and organic matter to the forest soil, and may in the longer term increase the risk for future nutrient imbalance, soil erosion on steep slopes, reduced forest production, and changes in biodiversity and ground vegetation species composition. However, field experiments so far have found contrasting results in this respect. Soil effects of increased biomass removal will be closely related to soil organic matter (SOM) dynamics, litter quality, and turnover rates. Harvest intensity may affect the decomposition of existing SOM as well as the build-up of new SOM from litter and forest residues, by changing factors like soil temperature and moisture as well as amount and type of litter input. Changes in input of litter with different nutrient concentrations and decomposition patterns along with changes in SOM decomposition will affect the total storage of carbon, nitrogen and other vital nutrients in the soil. In the context of a Norwegian research project started in 2009, we will quantify how different harvesting regimes lead to different C addition to soil, and determine which factors have the greatest effect on decomposition of SOM under different environmental conditions. Two Norway spruce forest ecosystems will be investigated, one in eastern and one in western Norway, representing different climatic conditions and landscape types. At each location, two treatment regimes will be tested: (1) conventional harvesting (CH), with residues left on-site, and (2) aboveground whole-tree harvest (WTH), with branches, needles, and tops removed. Input of different forest residues will be quantified post harvest. Soil water at 30 cm soil depth will be analysed for nutrients, and element fluxes will be estimated to provide information about nutrient leaching. Soil respiration will be measured, along with lab decomposition studies under different temperature and moisture regimes. Long term in situ decomposition studies will be carried out in the WTH plots using three different tree compartments (needles, coarse twigs, fine roots) decomposing in litter bags, in order to determine their limit value. The structure of the fungal community will be determined by soil core sampling and molecular techniques. Understory vegetation will be sampled to determine its biomass, and the frequency of all vascular plants, bryophytes and lichens will be estimated. After harvesting, replanting will be carried out. Seedling survival, causes of mortality and potential damage, growth, and needle nutrients will be monitored. Results from these studies will be used to identify key processes explaining trends observed in two series of ongoing long-term whole-tree thinning trials. We shall combine knowledge obtained using field experiments with results of modelling and data from the Norwegian Monitoring Programme for Forest Damage and the National Forest Inventory. The overall project aim is to predict and map the ecologically most suitable areas for increased harvesting of branches and tops on a regional scale, and to identify uncertainties and additional knowledge needed to improve current predictions.

Factors controlling bark decomposition and its role in wood decomposition in five tropical tree species

PubMed Central

Dossa, Gbadamassi G. O.; Paudel, Ekananda; Cao, Kunfang; Schaefer, Douglas; Harrison, Rhett D.

2016-01-01

Organic matter decomposition represents a vital ecosystem process by which nutrients are made available for plant uptake and is a major flux in the global carbon cycle. Previous studies have investigated decomposition of different plant parts, but few considered bark decomposition or its role in decomposition of wood. However, bark can comprise a large fraction of tree biomass. We used a common litter-bed approach to investigate factors affecting bark decomposition and its role in wood decomposition for five tree species in a secondary seasonal tropical rain forest in SW China. For bark, we implemented a litter bag experiment over 12 mo, using different mesh sizes to investigate effects of litter meso- and macro-fauna. For wood, we compared the decomposition of branches with and without bark over 24 mo. Bark in coarse mesh bags decomposed 1.11–1.76 times faster than bark in fine mesh bags. For wood decomposition, responses to bark removal were species dependent. Three species with slow wood decomposition rates showed significant negative effects of bark-removal, but there was no significant effect in the other two species. Future research should also separately examine bark and wood decomposition, and consider bark-removal experiments to better understand roles of bark in wood decomposition. PMID:27698461

Factors controlling bark decomposition and its role in wood decomposition in five tropical tree species.

PubMed

Dossa, Gbadamassi G O; Paudel, Ekananda; Cao, Kunfang; Schaefer, Douglas; Harrison, Rhett D

2016-10-04

Organic matter decomposition represents a vital ecosystem process by which nutrients are made available for plant uptake and is a major flux in the global carbon cycle. Previous studies have investigated decomposition of different plant parts, but few considered bark decomposition or its role in decomposition of wood. However, bark can comprise a large fraction of tree biomass. We used a common litter-bed approach to investigate factors affecting bark decomposition and its role in wood decomposition for five tree species in a secondary seasonal tropical rain forest in SW China. For bark, we implemented a litter bag experiment over 12 mo, using different mesh sizes to investigate effects of litter meso- and macro-fauna. For wood, we compared the decomposition of branches with and without bark over 24 mo. Bark in coarse mesh bags decomposed 1.11-1.76 times faster than bark in fine mesh bags. For wood decomposition, responses to bark removal were species dependent. Three species with slow wood decomposition rates showed significant negative effects of bark-removal, but there was no significant effect in the other two species. Future research should also separately examine bark and wood decomposition, and consider bark-removal experiments to better understand roles of bark in wood decomposition.

From the litter up and the sky down: Perspectives on urban ...

EPA Pesticide Factsheets

The structure of the urban forest represents the complex product of local biophysical conditions, socio-economic milieu, people preferences and management with rare counterparts in rural forests. However, urban forest structure, as similarly observed in rural forests, affects key ecological and hydrological processes as well as the plethora of organisms regulating these processes. This seminar talk will firstly present key mechanisms regulating urban eco-hydrological processes “from a litter up” perspective. In particular, fine scale effects of urban forest structure upon i) organic matter decomposition, and comminution, ii) community-assembly of decomposers, detritivores, and ecosystem engineers (i.e. bacteria, litter-dwelling macrofauna, ants), and iii) stormwater runoff infiltration and interception will be discussed. The second part of this intervention will look at the structure of the urban forest “from a sky down” perspective. Recent findings from large scale LiDAR investigations will be presented to discuss social and biophysical drivers affecting urban forest structure at sub-continental scale, as well as short-term tree loss dynamics across residential landscapes, and how these can potentially affect eco-hydrological processes at large scale. Urban forest structure, as similarly observed in rural forests, affects key ecological and hydrological processes as well as the plethora of organisms regulating these processes.

KSC-04pd1286

NASA Image and Video Library

2004-06-10

KENNEDY SPACE CENTER, FLA. - A young wild pig roots in the grass for food in an area near the NASA News Center at KSC. Feral pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. The pigs have flourished in the environs around KSC, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months.

KSC-04pd1287

NASA Image and Video Library

2004-06-10

KENNEDY SPACE CENTER, FLA. - Three wild pigs - a mother and her two offspring - root for food in the grass near the NASA News Center at KSC. Feral pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. The pigs have flourished in the environs around KSC, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months.

KSC-04pd1285

NASA Image and Video Library

2004-06-10

KENNEDY SPACE CENTER, FLA. - Three wild pigs - a mother and her two offspring - root for food in the grass near the NASA News Center at KSC. Feral pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. The pigs have flourished in the environs around KSC, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months.

KSC-2009-2107

NASA Image and Video Library

2009-03-03

CAPE CANAVERAL, Fla. – At NASA's Kennedy Space Center in Florida, a family of wild pigs roots through the grass for food. The wild pigs have flourished in the environs around Kennedy, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Their appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months. Photo credit: NASA/Ben Smegelsky

KSC-2009-2106

NASA Image and Video Library

2009-03-03

CAPE CANAVERAL, Fla. – At NASA's Kennedy Space Center in Florida, a family of wild pigs roots through the grass for food. The wild pigs have flourished in the environs around Kennedy, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Their appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months. Photo credit: NASA/Ben Smegelsky

KSC-04PD-1285

NASA Technical Reports Server (NTRS)

2004-01-01

KENNEDY SPACE CENTER, FLA. Three wild pigs a mother and her two offspring root for food in the grass near the NASA News Center at KSC. Feral pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. The pigs have flourished in the environs around KSC, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months.

KSC-04PD-1287

NASA Technical Reports Server (NTRS)

2004-01-01

KENNEDY SPACE CENTER, FLA. Three wild pigs a mother and her two offspring root for food in the grass near the NASA News Center at KSC. Feral pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. The pigs have flourished in the environs around KSC, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months.

KSC-04PD-1286

NASA Technical Reports Server (NTRS)

2004-01-01

KENNEDY SPACE CENTER, FLA. A young wild pig roots in the grass for food in an area near the NASA News Center at KSC. Feral pigs were introduced to Florida in the 1500s and are now found statewide in wooded areas close to water. The pigs have flourished in the environs around KSC, which shares a border with the Merritt Island National Wildlife Refuge, without many predators other than panthers and humans. Pigs are omnivores, foraging on the ground and rooting just beneath the surface, which damages the groundcover. Wild pigs eat almost anything that has nutritional value, including tubers, roots, shoots, acorns, fruits, berries, earthworms, amphibians, reptiles and rodents. Appearance is similar to domestic hogs, but leaner, with a longer, narrower head and a coarser, denser coat. Females may have two litters per year. The piglets are weaned in a few weeks but remain with the mother for several months.

Relationships between root respiration rate and root morphology, chemistry and anatomy in Larix gmelinii and Fraxinus mandshurica.

PubMed

Jia, Shuxia; McLaughlin, Neil B; Gu, Jiacun; Li, Xingpeng; Wang, Zhengquan

2013-06-01

Tree roots are highly heterogeneous in form and function. Previous studies revealed that fine root respiration was related to root morphology, tissue nitrogen (N) concentration and temperature, and varied with both soil depth and season. The underlying mechanisms governing the relationship between root respiration and root morphology, chemistry and anatomy along the root branch order have not been addressed. Here, we examined these relationships of the first- to fifth-order roots for near surface roots (0-10 cm) of 22-year-old larch (Larix gmelinii L.) and ash (Fraxinus mandshurica L.) plantations. Root respiration rate at 18 °C was measured by gas phase O2 electrodes across the first five branching order roots (the distal roots numbered as first order) at three times of the year. Root parameters of root diameter, specific root length (SRL), tissue N concentration, total non-structural carbohydrates (starch and soluble sugar) concentration (TNC), cortical thickness and stele diameter were also measured concurrently. With increasing root order, root diameter, TNC and the ratio of root TNC to tissue N concentration increased, while the SRL, tissue N concentration and cortical proportion decreased. Root respiration rate also monotonically decreased with increasing root order in both species. Cortical tissue (including exodermis, cortical parenchyma and endodermis) was present in the first three order roots, and cross sections of the cortex for the first-order root accounted for 68% (larch) and 86% (ash) of the total cross section of the root. Root respiration was closely related to root traits such as diameter, SRL, tissue N concentration, root TNC : tissue N ratio and stele-to-root diameter proportion among the first five orders, which explained up to 81-94% of variation in the rate of root respiration for larch and up to 83-93% for ash. These results suggest that the systematic variations of root respiration rate within tree fine root system are possibly due to the changes of tissue N concentration and anatomical structure along root branch orders in both tree species, which provide deeper understanding in the mechanism of how root traits affect root respiration in woody plants.

Final Environmental Assessment for Land Exchange at Dyess Air Force Base, Taylor County, Texas

DTIC Science & Technology

2011-10-01

of Rare Species Warnock’s coral-root Hexalectris warnockii in leaf litter and humus in oak-juniper woodlands on shaded slopes and intermittent, rocky...Floodplains; Land Use; Safety and Occupational Health; Socioeconomic and Environmental Justice; Soils; Threatened and Endangered Species ; Utilities...Finding of No Practicable Alternative (FONP A) is required. Special attention was given to resources that are regulated by the Endangered Species Act or

Impact of ecosystem management on microbial community level physiological profiles of postmining forest rehabilitation.

PubMed

Cookson, W R; O'Donnell, A J; Grant, C D; Grierson, P F; Murphy, D V

2008-02-01

We investigated the impacts of forest thinning, prescribed fire, and contour ripping on community level physiological profiles (CLPP) of the soil microbial population in postmining forest rehabilitation. We hypothesized that these management practices would affect CLPP via an influence on the quality and quantity of soil organic matter. The study site was an area of Jarrah (Eucalyptus marginata Donn ex Sm.) forest rehabilitation that had been mined for bauxite 12 years previously. Three replicate plots (20 x 20 m) were established in nontreated forest and in forest thinned from 3,000-8,000 stems ha(-1) to 600-800 stems ha(-1) in April (autumn) of 2003, followed either by a prescribed fire in September (spring) of 2003 or left nonburned. Soil samples were collected in August 2004 from two soil depths (0-5 cm and 5-10 cm) and from within mounds and furrows caused by postmining contour ripping. CLPP were not affected by prescribed fire, although the soil pH and organic carbon (C), total C and total nitrogen (N) contents were greater in burned compared with nonburned plots, and the coarse and fine litter mass lower. However, CLPP were affected by forest thinning, as were fine litter mass, soil C/N ratio, and soil pH, which were all higher in thinned than nonthinned plots. Furrow soil had greater coarse and fine litter mass, and inorganic phosphorous (P), organic P, organic C, total C, total N, ammonium, microbial biomass C contents, but lower soil pH and soil C/N ratio than mound soil. Soil pH, inorganic P, organic P, organic C, total C and N, ammonium, and microbial biomass C contents also decreased with depth, whereas soil C/N ratio increased. Differences in CLPP were largely (94%) associated with the relative utilization of gluconic, malic (greater in nonthinned than thinned soil and mound than furrow soil), L-tartaric, succinic, and uric acids (greater in thinned than nonthinned, mound than furrow, and 5-10 cm than 0-5 cm soil). The relative utilization of amino acids also tended to increase with increasing soil total C and organic C contents but decreased with increasing nitrate content, whereas the opposite was true for carboxylic acids. Only 45% of the variance in CLPP was explained using a multivariate multiple regression model, but soil C and N pools and litter mass were significant predictors of CLPP. Differences in soil textural components between treatments were also correlated with CLPP; likely causes of these differences are discussed. Our results suggest that 1 year after treatment, CLPP from this mined forest ecosystem are resilient to a spring prescribed fire but not forest thinning. We conclude that differences in CLPP are likely to result from complex interactions among soil properties that mediate substrate availability, microbial nutrient demand, and microbial community composition.

How can soil organic carbon stocks in agriculture be maintained or increased?

NASA Astrophysics Data System (ADS)

Don, Axel; Leifeld, Jens

2015-04-01

CO2 emissions from soils are 10 times higher than anthropogenic CO2 emissions from fossil burning with around 60 Pg C a-1. At the same time around 60 Pg of carbon is added to the soils as litter from roots and leaves. Thus, the balance between both fluxes is supposed to be zero for the global earth system in steady state without human perturbations. However, the global carbon flux has been altered by humans since thousands of years by extracting biomass carbon as food, feed and fiber with global estimate of 40% of net primary productivity (NPP). This fraction is low in forests but agricultural systems, in particular croplands, are systems with a high net exported carbon fraction. Soils are mainly input driven systems. Agricultural soils depend on input to compensate directly for i) respiration losses, ii) extraction of carbon (and nitrogen) and depletion (e.g. via manure) or indirectly via enhances NPP (e.g. via fertilization management). In a literature review we examined the role of biomass extraction and carbon input via roots, crop residues and amendments (manure, slurry etc.) to agricultural soil's carbon stocks. Recalcitrance of biomass carbon was found to be of minor importance for long-term carbon storage. Thus, also the impact of crop type on soil carbon dynamics seems mainly driven by the amount of crop residuals of different crop types. However, we found distinct differences in the efficiency of C input to refill depleted soil C stocks between above ground C input or below ground root litter C input, with root-C being more efficient due to slower turnover rates. We discuss the role of different measures to decrease soil carbon turnover (e.g. decreased tillage intensity) as compared to measures that increase C input (e.g. cover crops) in the light of global developments in agricultural management with ongoing specialization and segregation between catch crop production and dairy farms.

Rocky Martian Plain

NASA Technical Reports Server (NTRS)

1976-01-01

The rocky Martian plain surrounding Viking 2 is seen in high resolution in this 85-degree panorama sweeping from north at the left to east at right during the Martian afternoon on September 5. Large blocks litter the surface. Some are porous, sponge-like rocks like the one at the left edge (size estimate: 1 1/2 to 2 feet); others are dense and fine-grained, such as the very bright rounded block (1 to 1 1/2 feet across) toward lower right. Pebbled surface between the rocks is covered in places by small drifts of very fine material similar to drifts seen at the Viking 1 landing site some 4600 miles to the southwest. The fine-grained material is banked up behind some rocks, but wind tails seen by Viking 1 are not well-developed here. On the right horizon, flat-topped ridges or hills are illuminated by the afternoon sun. Slope of the horizon is due to the 8-degree tilt of the spacecraft.

Effectiveness of remediation of metal-contaminated mangrove sediments (Sydney estuary, Australia).

PubMed

Birch, Gavin; Nath, Bibhash; Chaudhuri, Punarbasu

2015-04-01

Industrial activities and urbanization have had a major consequence for estuarine ecosystem health and water quality globally. Likewise, Sydney estuary has been significantly impacted by widespread, poor industrial practices in the past, and remediation of legacy contaminants have been undertaken in limited parts of this waterway. The objective of the present investigation was to determine the effectiveness of remediation of a former Pb-contaminated industrial site in Homebush Bay on Sydney estuary (Australia) through sampling of inter-tidal sediments and mangrove (Avicennia marina) tissue (fine nutritive roots, pneumatophores, and leaves). Results indicate that since remediation 6 years previously, Pb and other metals (Cu, Ni and Zn) in surficial sediment have increased to concentrations that approach pre-remediation levels and that they were considerably higher than pre-settlement levels (3-30 times), as well as at the reference site. Most metals were compartmentalized in fine nutritive roots with bio-concentration factors greater than unity, while tissues of pneumatophores and leaves contained low metal concentrations. Lead concentrations in fine nutritive root, pneumatophore, and leaf tissue of mangroves from the remediated site were similar to trees in un-remediated sites of the estuary and were substantially higher than plants at the reference site. The situation for Zn in fine nutritive root tissue was similar. The source of the metals was either surface/subsurface water from the catchment or more likely remobilized contaminated sediment from un-remediated parts of Homebush Bay. Results of this study demonstrate the problems facing management in attempting to reduce contamination in small parts of a large impacted area to concentrations below local base level.

Effects of Mesocriconema xenoplax on Vitis vinifera and Associated Mycorrhizal Fungi.

PubMed

Pinkerton, J N; Schreiner, R P; Ivors, K L; Vasconcelos, M C

2004-09-01

Previous surveys of vineyards had indicated that Mesocriconema xenoplax was present in 85% of vineyards in western Oregon, but yields were not depressed in established vines. Microplot studies were initiated in 1997 in a Willamette Valley vineyard to determine the impact of M. xenoplax on vine establishment. Plots were infested with 0.03, 0.6, and 3.0 M. xenoplax g(-1) soil and planted with self-rooted Chardonnay and Pinot Noir vines. In November 2000, four growing seasons after planting, pruning weights, fine root weights, and fruit yield of vines planted in infested soil were reduced by 58%, 75%, and 33%, respectively, relative to control vines (planted in noninfested soil). In 1998 with ca 2000 degree-day base 9 degrees C accumulation, population densities increased 32-fold and 44-fold on 1-year-old Chardonnay and Pinot Noir vines, respectively. Nematode population dynamics and pruning data suggested that the carrying capacity of vines in microplots was 5 to 8 M. xenoplax g(-1) soil. In November 2000, more than 80% of the fine root length was colonized by arbuscular mycorrhizal fungi in all treatments. The frequency of fine roots containing arbuscules (the site of nutrient transfer between plant and fungus), however, was depressed from 5% to 65% in plants infested initially with M. xenoplax as compared to controls. Competition for photosynthate within the root system is proposed as a possible mechanism by which nematodes suppressed arbuscule frequency.

Soil carbon and belowground carbon balance of a short-rotation coppice: assessments from three different approaches.

PubMed

Berhongaray, Gonzalo; Verlinden, Melanie S; Broeckx, Laura S; Janssens, Ivan A; Ceulemans, Reinhart

2017-02-01

Uncertainty in soil carbon (C) fluxes across different land-use transitions is an issue that needs to be addressed for the further deployment of perennial bioenergy crops. A large-scale short-rotation coppice (SRC) site with poplar ( Populus ) and willow ( Salix ) was established to examine the land-use transitions of arable and pasture to bioenergy. Soil C pools, output fluxes of soil CO 2 , CH 4 , dissolved organic carbon (DOC) and volatile organic compounds, as well as input fluxes from litter fall and from roots, were measured over a 4-year period, along with environmental parameters. Three approaches were used to estimate changes in the soil C. The largest C pool in the soil was the soil organic carbon (SOC) pool and increased after four years of SRC from 10.9 to 13.9 kg C m -2 . The belowground woody biomass (coarse roots) represented the second largest C pool, followed by the fine roots (Fr). The annual leaf fall represented the largest C input to the soil, followed by weeds and Fr. After the first harvest, we observed a very large C input into the soil from high Fr mortality. The weed inputs decreased as trees grew older and bigger. Soil respiration averaged 568.9 g C m -2  yr -1 . Leaching of DOC increased over the three years from 7.9 to 14.5 g C m -2 . The pool-based approach indicated an increase of 3360 g C m -2 in the SOC pool over the 4-year period, which was high when compared with the -27 g C m -2 estimated by the flux-based approach and the -956 g C m -2 of the combined eddy-covariance + biometric approach. High uncertainties were associated to the pool-based approach. Our results suggest using the C flux approach for the assessment of the short-/medium-term SOC balance at our site, while SOC pool changes can only be used for long-term C balance assessments.

High organic inputs explain shallow and deep SOC storage in a long-term agroforestry system - combining experimental and modeling approaches

NASA Astrophysics Data System (ADS)

Cardinael, Rémi; Guenet, Bertrand; Chevallier, Tiphaine; Dupraz, Christian; Cozzi, Thomas; Chenu, Claire

2018-01-01

Agroforestry is an increasingly popular farming system enabling agricultural diversification and providing several ecosystem services. In agroforestry systems, soil organic carbon (SOC) stocks are generally increased, but it is difficult to disentangle the different factors responsible for this storage. Organic carbon (OC) inputs to the soil may be larger, but SOC decomposition rates may be modified owing to microclimate, physical protection, or priming effect from roots, especially at depth. We used an 18-year-old silvoarable system associating hybrid walnut trees (Juglans regia × nigra) and durum wheat (Triticum turgidum L. subsp. durum) and an adjacent agricultural control plot to quantify all OC inputs to the soil - leaf litter, tree fine root senescence, crop residues, and tree row herbaceous vegetation - and measured SOC stocks down to 2 m of depth at varying distances from the trees. We then proposed a model that simulates SOC dynamics in agroforestry accounting for both the whole soil profile and the lateral spatial heterogeneity. The model was calibrated to the control plot only. Measured OC inputs to soil were increased by about 40 % (+ 1.11 t C ha-1 yr-1) down to 2 m of depth in the agroforestry plot compared to the control, resulting in an additional SOC stock of 6.3 t C ha-1 down to 1 m of depth. However, most of the SOC storage occurred in the first 30 cm of soil and in the tree rows. The model was strongly validated, properly describing the measured SOC stocks and distribution with depth in agroforestry tree rows and alleys. It showed that the increased inputs of fresh biomass to soil explained the observed additional SOC storage in the agroforestry plot. Moreover, only a priming effect variant of the model was able to capture the depth distribution of SOC stocks, suggesting the priming effect as a possible mechanism driving deep SOC dynamics. This result questions the potential of soils to store large amounts of carbon, especially at depth. Deep-rooted trees modify OC inputs to soil, a process that deserves further study given its potential effects on SOC dynamics.