Factors for improved fish passage waterway construction.

DOT National Transportation Integrated Search

2011-06-01

Streambeds are important fish passageways in Oregon; they provide for the necessary habitats and spawning cycles of a healthy fish population. Oregon state law requires that hydraulic structures located in water properly provide fish passage. Increas...

A barrier to upstream migration in the fish passage of Itaipu Dam (Canal da Piracema), Paraná River basin

USGS Publications Warehouse

,; Fontes Júnior, Hélio Martins; Makrakis, Sergio; Gomes, Luiz Carlos; Latini, João Dirço

2012-01-01

The majority of the fish passages built in the Neotropical region are characterised by low efficiency and high selectivity; in many cases, the benefits to fish populations are uncertain. Studies conducted in the Canal da Piracema at Itaipu dam on the Parana River indicate that the system component designated as the Discharge channel in the Bela Vista River (herein named Canal de deságue no rio Bela Vista or CABV), a 200 m long technical section, was the main barrier to the upstream migration. The aim of this study was to evaluate the degree of restriction imposed by the CABV on upstream movements of Prochilodus lineatus and Leporinus elongatus, Characiformes. Fish were tagged with passive integrated transponders (PIT tags) and released both downstream and upstream of this critical section. Individuals of both species released downstream of the CABV took much more time to reach the upper end of the system (43.6 days vs. 15.9 days), and passed in much lower proportions (18% vs. 60.8%) than those tagged upstream of this component. Although more work is needed to differentiate between fishway effects and natural variation in migratory motivation, the results clearly demonstrate passage problems at the CABV.

Behavior and dam passage of juvenile Chinook salmon at Cougar Reservoir and Dam, Oregon, March 2012 - February 2013

USGS Publications Warehouse

Beeman, John W.; Hansel, Hal C.; Hansen, Amy C.; Evans, Scott D.; Haner, Philip V.; Hatton, Tyson; Kofoot, Eric E.; Sprando, Jamie M.; Smith, Collin

2014-01-01

The movements and dam passage of individual juvenile Chinook salmon (Oncorhynchus tshawytscha) were studied at Cougar Reservoir and Dam, near Springfield, Oregon, during 2012 and 2013. Cougar Dam is a high-head flood-control reservoir with a temperature control tower as its outlet enabling selective withdrawals of water at various depths to control the temperature of water passed downstream. This report describes the second year of a 2-year study with the goal of providing information to inform decisions about future downstream passage alternatives. Inferences were based on the behavior of yearling-size juvenile Chinook salmon implanted with acoustic transmitters. The fish were released near the head of the reservoir during the spring (March, April, and May) and fall (September, October, and November) of 2012. Most tagged fish were of hatchery origin (468 spring, 449 fall) because of the low number of wild fish captured from within the reservoir (0 spring, 65 fall). Detections at hydrophones placed in several lines across the reservoir and within a collective system used to estimate three-dimensional positions near the temperature control tower were used to determine fish behavior and factors affecting dam passage rates. Most tagged fish made repeated non-random migrations from one end of the reservoir to the other and took a median of 3.7–11.7 days to travel about 7 kilometers from the release site to within about 100 meters of the temperature control tower, depending on season and origin. Reservoir passage efficiency (percentage of tagged fish detected at the head of the forebay) was 97.8 percent for hatchery fish and 74.2 percent for wild fish. Tagged fish commonly were within about 100 meters of the temperature control tower, and often spent considerable time near the entrance to the tower; however, the dam passage efficiency (percentage of dam passage of fish detected at the head of the forebay) was low for fish released during the spring (11.1 percent) and moderate for fish released during the fall (58.1 percent for hatchery fish, 65.2 percent for wild fish) over the 90th percentile of the empirically determined tag life, which was about 90 days. The primary factors affecting the dam passage rate were diel period, dam discharge, and reservoir elevation, and most passage occurred during conditions of night, high dam discharge, and low reservoir elevation. Most fish entering the temperature control tower passed the dam without returning to the reservoir. The common presence of tagged fish near the tower entrance and high proportion of dam passage after tower entry suggests that the primary cause of the poor dam passage rate was the low rate of tower entry. We hypothesize that fish reject the tower entrance because of low water velocities contributing to a small flow field, an abrupt deceleration at the trash rack, or a combination of those two conditions. Results of a controlled test of head differential (the difference between water elevation outside and inside the temperature control tower) indicated weak statistical support (P= 0.0930) for a greater tower entry rate when the differential was 0.65–1.00 foot compared to 0.00–0.30 foot. Results from hatchery and wild fish were similar, with the exception of the reservoir passage efficiency, indicating hatchery fish were suitable surrogates for the wild fish for the purpose of this study.

Dam operations affect route-specific passage and survival of juvenile Chinook salmon at a main-stem diversion dam

USGS Publications Warehouse

Perry, Russell W.; Kock, Tobias J.; Couter, Ian I; Garrison, Thomas M; Hubble, Joel D; Child, David B

2016-01-01

Diversion dams can negatively affect emigrating juvenile salmon populations because fish must pass through the impounded river created by the dam, negotiate a passage route at the dam and then emigrate through a riverine reach that has been affected by reduced river discharge. To quantify the effects of a main-stem diversion dam on juvenile Chinook salmon in the Yakima River, Washington, USA, we used radio telemetry to understand how dam operations and river discharge in the 18-km reach downstream of the dam affected route-specific passage and survival. We found evidence of direct mortality associated with dam passage and indirect mortality associated with migration through the reach below the dam. Survival of fish passing over a surface spill gate (the west gate) was positively related to river discharge, and survival was similar for fish released below the dam, suggesting that passage via this route caused little additional mortality. However, survival of fish that passed under a sub-surface spill gate (the east gate) was considerably lower than survival of fish released downstream of the dam, with the difference in survival decreasing as river discharge increased. The probability of fish passing the dam via three available routes was strongly influenced by dam operations, with passage through the juvenile fish bypass and the east gate increasing with discharge through those routes. By simulating daily passage and route-specific survival, we show that variation in total survival is driven by river discharge and moderated by the proportion of fish passing through low-survival or high-survival passage routes.

Fish elevator and method of elevating fish

DOEpatents

Truebe, Jonathan; Drooker, Michael S.

1984-01-01

A means and method for transporting fish from a lower body of water to a higher body of water. The means comprises a tubular lock with a gated entrance below the level of the lower body of water through which fish may enter the lock and a discharge passage above the level of the upper body of water. The fish raising means in the lock is a crowder pulled upward by a surface float as water from the upper body of water gravitationally flows into the closed lock filling it to the level of the upper body. Water is then pumped into the lock to raise the level to the discharge passage. The crowder is then caused to float upward the remaining distance through the water to the level of the discharge passage by the introduction of air into a pocket on the underside of the crowder. The fish are then automatically discharged from the lock into the discharge passage by the out of water position of the crowder. The movement of the fish into the discharge passage is aided by the continuous overflow of water still being pumped into the lock. A pipe may be connected to the discharge passage to deliver the fish to a selected location in the upper body of water.

Culvert roughness elements for native Utah fish passage : phase II.

DOT National Transportation Integrated Search

2012-04-01

Native fishes have become an increasingly important concern when designing fish passable culverts. Many operational culverts constrict waterways which increase velocities and prevent upstream passage of small fish species. The current method to ensur...

The Independent Technical Analysis Process

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duberstein, Corey A.; Ham, Kenneth D.; Dauble, Dennis D.

2007-04-13

The Bonneville Power Administration (BPA) contracted with the Pacific Northwest National Laboratory (PNNL) to provide technical analytical support for system-wide fish passage information (BPA Project No. 2006-010-00). The goal of this project was to produce rigorous technical analysis products using independent analysts and anonymous peer reviewers. In the past, regional parties have interacted with a single entity, the Fish Passage Center to access the data, analyses, and coordination related to fish passage. This project provided an independent technical source for non-routine fish passage analyses while allowing routine support functions to be performed by other well-qualified entities.

Behaviour and Locomotor Activity of a Migratory Catostomid during Fishway Passage

PubMed Central

Silva, Ana T.; Hatry, Charles; Thiem, Jason D.; Gutowsky, Lee F. G.; Hatin, Daniel; Zhu, David Z.; W. Dawson, Jeffery; Katopodis, Christos; J. Cooke, Steven

2015-01-01

Fishways have been developed to restore longitudinal connectivity in rivers. Despite their potential for aiding fish passage, fishways may represent a source of significant energetic expenditure for fish as they are highly turbulent environments. Nonetheless, our understanding of the physiological mechanisms underpinning fishway passage of fish is still limited. We examined swimming behaviour and activity of silver redhorse (Moxostoma anisurum) during its upriver spawning migration in a vertical slot fishway. We used an accelerometer-derived instantaneous activity metric (overall dynamic body acceleration) to estimate location-specific swimming activity. Silver redhorse demonstrated progressive increases in activity during upstream fishway passage. Moreover, location-specific passage duration decreased with an increasing number of passage attempts. Turning basins and the most upstream basin were found to delay fish passage. No relationship was found between basin-specific passage duration and activity and the respective values from previous basins. The results demonstrate that successful fishway passage requires periods of high activity. The resultant energetic expenditure may affect fitness, foraging behaviour and increase susceptibility to predation, compromising population sustainability. This study highlights the need to understand the physiological mechanisms underpinning fishway passage to improve future designs and interpretation of biological evaluations. PMID:25853245

Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1989 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnsen, Richard C.

1990-02-19

This project is a part of the continuing Smolt Monitoring Program (SMP) to monitor Columbia Basin salmonid stocks coordinated by the Fish Passage Center (FPC). The SMP provides timely data to the Fish Passage Managers for in season flow and spill management for fish passage and post-season analysis by the FPC for travel time, relative magnitude and timing of the smolt migration. Sampling sites were McNary, John Day and Bonneville Dams under the SMP, and the Dalles Dam under the Fish Spill Memorandum of Agreement'' for 1989. All pertinent fish capture, condition and brand data, as well as dam operationsmore » and river flow data were incorporated into the FPC Fish Passage Data Information System (FPDIS). 15 refs., 6 figs., 6 tabs.« less

Sensor Fish Characterization of Fish Passage Conditions through John Day Dam Spillbay 20 with a Modified Flow Deflector

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duncan, Joanne P.

Fish passage conditions over a modified deflector in Spillbay 20 at John Day Dam were evaluated by Pacific Northwest National Laboratory for the U.S. Army Corps of Engineers (USACE), Portland District, using Sensor Fish devices. The objectives of the study were to describe and compare passage exposure conditions at two spill discharges, 2.4 and 4.0 thousand cubic feet per second (kcfs), identifying potential fish injury regions within the routes, and to evaluate a low-tailwater condition at the 2.4-kcfs discharge. The study was performed in April 2010 concurrent with HI-Z balloon-tag studies by Normandeau Associates, Inc. Sensor Fish data were analyzedmore » to estimate 1) exposure conditions, particularly exposure to severe collision and shear events; 2) differences in passage conditions between treatments; and 3) relationships to live-fish injury and mortality data estimates. Nearly all Sensor Fish significant events were classified as collisions; the most severe occurred at the gate, on the spillbay chute, or at the deflector transition. Collisions in the gate region were observed only during the 2.4-kcfs discharge, when the tainter gate was open 1.2 ft. One shear event was observed during the evaluation, occurring at the deflector transition during passage at the 2.4-kcfs discharge at low tailwater. Flow quality, computed using the Sensor Fish turbulence index, was best for passage at the low-flow low-tailwater condition as well. The worst flow quality was observed for the 4.0-kcfs test condition. Contrasting the passage exposure conditions, the 2.4-kcfs low-tailwater treatment would be most deleterious to fish survival and well-being.« less

Interim results from a study of the behavior of juvenile Chinook salmon at Cougar Reservoir and Dam, Oregon, March--August 2011

USGS Publications Warehouse

Beeman, John W.; Hansel, Hal C.; Hansen, Amy C.; Haner, Philip V.; Sprando, Jamie M.; Smith, Collin D.; Evans, Scott D.

2012-01-01

The movements and dam passage of yearling juvenile Chinook salmon implanted with acoustic transmitters and passive integrated transponder tags were studied at Cougar Reservoir and Dam, near Springfield, Oregon. A total of 411 hatchery fish and 26 wild fish were tagged and released between March 7 and May 21, 2011. A series of 16 autonomous hydrophones placed throughout the reservoir were used to determine general fish movements over the life of the acoustic transmitter, which was expected to be 91 days. Movements within the reservoir were directional, and it was common for fish to migrate repeatedly from the head of the reservoir downstream to the dam outlet and back. The dam passage rate was 11.2 percent (95-percent confidence interval 7.8–14.6 percent) for hatchery fish and 15.4 percent (95-percent confidence interval -1.0–31.8 percent) for wild fish within 91 days from release. Most fish passage occurred at night. The median time from release to dam passage was 34.5 days for hatchery fish and 34.2 days for wild fish. A system of hydrophones near the dam outlet, a temperature control tower, was used to estimate positions of fish in three dimensions to enable detailed analyses of fish behavior near the tower. Analyses of these data indicate that hourly averaged depths of fish within a distance of 74 m from the upstream face of the tower ranged from 0.6 to 9.6 meters, with a median depth of 3.6 meters for hatchery fish and 3.4 meters for wild fish. Dam discharge rates and the diurnal period affected the rates of dam passage. Rates of dam passage were similar when the dam discharge rate was less than 1,200 cubic feet per second, but increased sharply at higher discharges. The rate of dam passage at night was 4.4–7.8 times greater than during the day, depending on the distance of fish from the dam. This report is an interim summary of data collected as of August 3, 2011, for planning purposes.

Behavior and dam passage of juvenile Chinook salmon at Cougar Reservoir and Dam, Oregon, March 2011 - February 2012

USGS Publications Warehouse

Beeman, John W.; Hansel, Hal C.; Hansen, Amy C.; Haner, Philip V.; Sprando, Jamie M.; Smith, Collin D.; Evans, Scott D.; Hatton, Tyson W.

2013-01-01

The movements and dam passage of juvenile Chinook salmon implanted with acoustic transmitters and passive integrated transponder tags were studied at Cougar Reservoir and Dam, near Springfield, Oregon. The purpose of the study was to provide information to aid with decisions about potential alternatives for improving downstream passage conditions for juvenile salmonids in this flood-control reservoir. In 2011, a total of 411 hatchery fish and 26 wild fish were tagged and released during a 3-month period in the spring, and another 356 hatchery fish and 117 wild fish were released during a 3-month period in the fall. A series of 16 autonomous hydrophones throughout the reservoir and 12 hydrophones in a collective system near the dam outlet were used to determine general movements and dam passage of the fish over the life of the acoustic transmitter, which was expected to be about 3 months. Movements within the reservoir were directional, and it was common for fish to migrate repeatedly from the head of the reservoir downstream to the dam outlet and back to the head of the reservoir. Most fish were detected near the temperature control tower at least once. The median time from release near the head of the reservoir to detection within about 100 meters of the dam outlet at the temperature control tower was between 5.7 and 10.8 days, depending on season and fish origin. Dam passage events occurred over a wider range of dates in the spring and summer than in the fall and winter, but dam passage numbers were greatest during the fall and winter. A total of 10.5 percent (43 of 411) of the hatchery fish and 15.4 percent (4 of 26) of the wild fish released in the spring are assumed to have passed the dam, whereas a total of 25.3 percent (90 of 356) of the hatchery fish and 16.9 percent (30 of 117) of the wild fish released in the fall are assumed to have passed the dam. A small number of fish passed the dam after their transmitters had stopped working and were detected at passive integrated transponder detectors at various locations downstream of the dam, indicating some tagged fish passed the dam undetected. The rate of dam passage was affected by diel period, discharge, and reservoir elevation. Diel period was the most influential factor of those examined, with nighttime dam passage rates about 9 times greater than daytime rates, depending on the distance of fish from the dam outlet. Dam passage rates also were positively related to dam discharge, and negatively related to reservoir elevation. In the operational condition used as an example, fish approached the dam outlet at the temperature control tower from the south and east and, when most fish got near the tower, they were directly in front of it. In many cases, the results for wild and hatchery fish were similar, or the results suggested hatchery fish could be reasonable surrogates for wild fish. Hatchery-origin and wild-origin fish behaved similarly in the following ways: their general movements in the reservoir; the timing of their dam passage; and the effects of diel period, discharge, and elevation on their passage rates. Parasitic copepods were present on most wild fish examined, and the mortality of wild fish during capture, handling and tagging was much greater than that of hatchery fish. This suggests that the ability of wild fish to cope with stressors may be less than that of fish directly from the hatchery.

Fish passage in a western Iowa stream modified by grade control structures

USGS Publications Warehouse

Litvan, M.E.; Pierce, C.L.; Stewart, T.W.; Larson, C.J.

2008-01-01

Grade control structures (GCSs) are commonly used in streams of western Iowa to control bank erosion and channel headcutting but may be barriers to fish passage. From May 2002 to May 2006, we used mark-recapture methods to evaluate fish passage over a total of five GCSs, ranging in slope (run : rise) from 13:1 to 18:1 in Turkey Creek, Cass County, Iowa. Three structures, over which limited fish movement was documented from 2002 to 2004, were modified in the winter of 2004-2005 to facilitate fish passage. Before modification, the majority of recaptured fish were recaptured at the station where they were originally marked; only 1% displayed movement between sites and either upstream or downstream over a GCS. After modification fish passage improved, 14% of recaptured fish displayed movement either upstream or downstream over a GCS. Individuals of four target species - channel catfish Ictalurus punctatus, yellow bullhead Ameiurus natalis, black bullhead A. melas, and creek chub Semotilus atromaculatus - passed over at least one modified structure. The majority of documented movements over GCSs were in the upstream direction and occurred in late spring and early summer, when streamflow was relatively high. Although we documented low numbers of fish passing both upstream and downstream over GCSs, these structures are probably barriers to fish movement during periods of low flow and when there is a structural failure, such as in-channel movement of riprap. Grade control structures are pervasive in western Iowa streams; nearly every low-order stream contains at least one instream structure. To sustain fish populations, management efforts should focus on constructing or modifying GCSs to allow fish passage. ?? Copyright by the American Fisheries Society 2008.

Route-Specific Passage Proportions and Survival Rates for Fish Passing through John Day Dam, The Dalles Dam, and Bonneville Dam in 2010 and 2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ploskey, Gene R.; Weiland, Mark A.; Carlson, Thomas J.

This report fulfills a request of the U.S. Army Engineer District, Portland, Oregon, to produce an interim report of estimates of route-specific fish passage proportions and survival rates for lower Columbia River dams in 2010 and 2011. The estimates are needed to update the Compass Model for the Columbia River Treaty and the new Biological Opinion before detail technical reports are published in late 2012. This report tabulates route-specific fish-passage proportions and survival rates for steelhead and Chinook salmon smolts passing through various sampled routes at John Day Dam, The Dalles Dam, and Bonneville Dam in 2010 and 2011. Resultsmore » were compiled from analyses of data acquired in spring 2010 and 2011 studies that were specifically designed to estimate dam-passage and forebay-to-tailrace survival rates, travel time metrics, and spill passage efficiency, as stipulated by the 2008 Federal Columbia River Power System Biological Opinion and the Columbia Basin Fish Accords. The study designs allowed for estimation of route-specific fish passage proportions and survival rates as well as estimation of forebay-passage survival, all of which are summarized herein.« less

Computational study of fish passage through circular culverts in Northeast Ohio.

DOT National Transportation Integrated Search

2013-11-01

An investigation has been carried out in Northeast Ohio to determine the percentage of culverts that act : as barriers for fish passage and to identify the design parameters that can be associated with passage : success through stream simulation in t...

Passage of native riverine fishes through geometrically different sections of a vertical slot fishway on the Moselle River, Germany

USGS Publications Warehouse

Pitsch, Matthias; Mockenhaupt, Bernd; Castro-Santos, Theodore R.

2014-01-01

In order to study effects of different geometric types of pools or change of the flow direction on the passability of fish, sets of PIT antennas were installed inside a modern vertical slot fishway at the mouth of the River Moselle. Fish of 13 abundant species were caught and tagged with PIT tags in 2013 and released in the tailwater of Koblenz. 16% of the tagged fish were detected entering the fishway a short time after release. These individuals provided data on entry and passage rates for different sections of the fishway. Preliminary results show differences in passage time and passage rates between different sections of the fishway.

Physiological, energetic and behavioural correlates of successful fishway passage of adult sockeye salmon Oncorhynchus nerka in the Seton River, British Columbia.

PubMed

Pon, L B; Hinch, S G; Cooke, S J; Patterson, D A; Farrell, A P

2009-04-01

Electromyogram (EMG) radio telemetry was used in conjunction with physiological biopsy to relate prior physiological condition and subsequent swimming energetics and behaviours to passage success of 13 wild adult sockeye salmon Oncorhynchus nerka at a vertical-slot fishway on the Seton River, British Columbia. At the time of capture, plasma lactate, glucose and cortisol levels indicated that fish were not exhibiting unusually high levels of physiological stress. Very few differences existed between successful and unsuccessful fish in body size, initial plasma physiology and energy state and mean swim speed and energy use during passage. Generally, fish did not employ burst swimming during successful or failed attempts at passage, indicating that failure was probably not related to metabolic acidosis. Plasma Na(+) concentration was significantly lower in unsuccessful fish (P < 0.05), which is suggestive of a depressed ionic state or a possible stress component, although values in all fish were within an expected range for migrant adult O. nerka. Nevertheless, six of 13 fish failed to reascend the fishway and remained in the tailrace of the dam for more than a day on average before moving downstream and away from the dam. During this time, fish were observed actively seeking a means of passage, suggesting that there may have been other, undetermined causes of passage failure.

Federal interagency nature‐like fishway passage design guidelines for Atlantic coast diadromous fishes

USGS Publications Warehouse

Turek, James; Haro, Alexander J.; Towler, Brett

2016-01-01

The National Marine Fisheries Service (NMFS), the U.S. Geological Survey (USGS) and the U.S. Fish and Wildlife Service (USFWS) have collaborated to develop passage design guidance for use by engineers and other restoration practitioners considering and designing nature‐like fishways (NLFs). The primary purpose of these guidelines is to provide a summary of existing fish swimming and leaping performance data and the best available scientific information on safe, timely and effective passage for 14 diadromous fish species using Atlantic Coast rivers and streams. These guidelines apply to passage sites where complete barrier removal is not possible. This technical memorandum presents seven key physical design parameters based on the biometrics and swimming mode and performance of each target fishes for application in the design of NLFs addressing passage of a species or an assemblage of these species. The passage parameters include six dimensional guidelines recommended for minimum weir opening width and depth, minimum pool length, width and depth, and maximum channel slope, along with a maximum flow velocity guideline for each species. While these guidelines are targeted for the design of step‐pool NLFs, the information may also have application in the design of other NLF types being considered at passage restoration sites and grade control necessary for infrastructure protection upstream of some dam removals, and in considering passage performance at sites such as natural bedrock features.

COMPLIANCE STUDIES: WHAT ABOUT THE FISH?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Woodley, Christa M.; Fischer, Eric S.; Wagner, Katie A.

2013-08-21

ABSTRACT It is understood that operational and structural conditions at hydroelectric facilities along with environmental conditions of the migration corridors affect the passage conditions for fish. Hydropower fish survival assessments at the individual- and population-level have progressed over the past decade with development of turbine simulation software and improvements in telemetry systems, in particular, micro-transmitters, cabled and autonomous receivers, and advanced statistical designs that provide precise estimates of passage routes and dam-passage survival. However, these approaches often ignore fish condition as a variable in passage and survival analyses. To account for fish condition effects on survival results, compliance statistical modelsmore » often require increased numbers of tagged fish. For example, prior to and during migration, fish encounter numerous stressors (e.g., disease, predation, contact with structures, decompression events), all of which can cause physical and physiological stress, altering the probability of survival after passage through a dam or a series of dams. In addition, the effects of surgical transmitter implantation process or the transmitter itself may cause physiological stress, alter behavior, and/or decrease survival. Careful physiological evaluations can augment survival model assumptions, resultant data, and predictive scenarios. To exemplify this, surgeons concurrently noted fish condition and surgical implantation during a multi-dam compliance study in 2011. The analyses indicted that surgeon observations on fish condition and surgical outcomes were related to 24 h holding mortalities and fish that never detected after release. Short reach and long reach survival were related to surgical outcomes and fish condition, respectively.« less

Fish passage through retrofitted culverts : final report.

DOT National Transportation Integrated Search

2004-11-01

Long term and short term studies of fish movement were conducted at several retrofitted culverts within Oregon. This was done to assess the effectiveness of retrofitting culverts with baffles to improve fish passage. The long term results showed that...

Facilitating fish passage at ultra low head dams: An alternative to dam removal

USGS Publications Warehouse

Odeh, M.

2004-01-01

Ecosystem sustainability and returning the biological integrity to rivers continue to change the landscape of fish passage technology. Installing a conventional fishways has a limited degree of success in accommodating fish passage needs. Recently, the option of total dam removal has been gaining momentum among resource managers, conservationists, and even engineers. Certain dams, however, cannot be removed, and conventional fishways are either too expensive to build or the real estate is simply not available; yet freedom of passage must be attained. At the Little Falls Dam on the Potomac River a notch in the crest of the dam was installed to accommodate passage of fish. The notch has three labyrinth weirs used for energy dissipation. Water velocities are maintained at less than about 4 m/s anywhere within the passage structure during migratory season of the target species (American shad). Construction of this novel design was recently completed (March 2000) and future biological evaluations are ongoing. Copyright ASCE 2004.

Walla Walla River Fish Passage Operations Project : Annual Progress Report October 2007 - September 2008.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bronson, James P.; Duke, Bill; Loffink, Ken

2008-12-30

In the late 1990s, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate fish migration conditions in the basin. Migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow requirements, and providing trap and haul efforts when needed. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survival ofmore » migrating adult and juvenile salmonids in the Walla Walla River basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage and trapping facility design, operation, and criteria. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. Beginning in March of 2007, two work elements from the Walla Walla Fish Passage Operations Project were transferred to other projects. The work element Enumeration of Adult Migration at Nursery Bridge Dam is now conducted under the Walla Walla Basin Natural Production Monitoring and Evaluation Project and the work element Provide Transportation Assistance is conducted under the Umatilla Satellite Facilities Operation and Maintenance Project. Details of these activities can be found in those project's respective annual reports.« less

PNNL Tests Fish Passage System

ScienceCinema

Colotelo, Alison

2018-01-16

Scientists from PNNL are testing a fish transportation system developed by Whooshh Innovations. The Whooshh system uses a flexible tube that works a bit like a vacuum, guiding fish over hydroelectric dams or other structures. Compared to methods used today, this system could save money while granting fish quicker, safer passage through dams and hatcheries.

PNNL Tests Fish Passage System

DOE Office of Scientific and Technical Information (OSTI.GOV)

Colotelo, Alison

2015-03-13

Scientists from PNNL are testing a fish transportation system developed by Whooshh Innovations. The Whooshh system uses a flexible tube that works a bit like a vacuum, guiding fish over hydroelectric dams or other structures. Compared to methods used today, this system could save money while granting fish quicker, safer passage through dams and hatcheries.

Long-term bed degradation in Maryland streams (phase 2) : Blue Ridge and western Piedmont provinces [research summary].

DOT National Transportation Integrated Search

2012-03-01

Problem: : Estimation of potential long-term down-cutting of the stream bed is necessary for evaluation and design of bridges for scour and culverts for fish passage. Existing guidelines for assessing this potential long-term bed degradation (LTBD) i...

Passage and behavior of radio-tagged adult Pacific Lamprey (Entosphenus tridentata) at the Willamette Falls Project, Oregon, 2005-07

USGS Publications Warehouse

Mesa, Matthew G.; Magie, Robert J.; Copeland, Elizabeth S.

2009-01-01

We used radio telemetry to monitor passage and describe behavior characteristics of adult Pacific lampreys, Entosphenus tridentata, during their upstream migration at the Willamette Falls Project (Project) on the Willamette River near Portland, Oregon. Our objectives were to document: (1) specific routes of passage at the dam and falls; (2) duration of passage through different routes; and (3) overall passage success. During the spring through autumn of 2005 and 2006, fish were captured in a trap located in the fishway at the Project or collected by hand from the falls, surgically implanted with a radio tag, and released 2 kilometers downstream of the Project. We radio tagged 136 lampreys in 2005 and 107 in 2006. In both years, more than 90 percent of the fish returned to the Project with a median travel time of 7-9 hours. Most fish were first detected at the Project from about 20:00-23:00 hours. In 2005, 43 fish (35 percent) successfully passed through the fishway of the Project, which has four separate entrances and three distinct passage channels or legs that converge at one exit. Prior to the installation of flashboards around the perimeter of the falls in July, lampreys used all three legs of the fishway to pass the Project. After flashboards were installed, only fishway leg 1 was used. The peak of passage occurred in August. No fish passed over the falls, but 13 percent of the lampreys that traveled to the Project ascended at least partway up the falls. In 2006, 24 fish (23 percent) passed the Project, again primarily using fishway leg 1. Most fish passed prior to June 9 when the powerhouse was shut down due to construction. Although 19 lampreys ascended the falls, only 2 passed through this route in late June and early July. Flashboards were not installed in 2006. For both years, the time it took for fish to pass through the fishway depended on which leg they used - the median passage time was at least 4-5 hours in fishway legs 2 and 3 and ranged from 23 to 74 hours in fishway leg 1. Many fish resided in the tailrace for times ranging from a few hours to almost a year and eventually left the Project and moved downstream. Collectively, our results indicate that passage of radio-tagged upstream migrating Pacific lamprey at the Willamette Falls Project is relatively poor compared to passage success of these fish at dams on the Columbia River. Factors contributing to the low passage of lampreys at the Project may include low flows and water levels at fishway entrances, impediments in the fishways, delayed tagging effects, changing environmental and operational conditions, a learned aversion to a fishway, difficult passage over the falls, or not all lamprey are destined to migrate upstream of the falls.

Influence of seasonal, diel, lunar, and other environmental factors on upstream fish passage in the igarapava fish ladder, Brazil

USGS Publications Warehouse

Bizzotto, P.M.; Godinho, Alexandre L.; Vono, V.; Kynard, B.; Godinho, Hugo P.

2009-01-01

Upstream fish passage was evaluated during 12 months in the vertical-slot Igarapava Fish Ladder constructed around Igarapava Dam, in the heavily dammed Grande River, Southeast Brazil. A video monitoring system was used to observe 61,621 fish that passed the ladder, of which 93.5% were identified to 15 taxa. Among the migratory species, the most abundant were Pimelodus maculatus (33.6% of all fish), Leporinus octofasciatus (31.4%), Leporinus friderici (4.5%), and Prochilodus lineatus (3.1%). Seven taxa were classified as nonmigratory, and of these taxa, the small Bryconamericus stramineus was the most abundant (12.7%) of all fishes. Passage of the 'nonmigratory' taxa upstream in the ladder shows they are migratory in this system and have a strong behavioural drive to move to upstream habitat. Passage of most taxa had a strong seasonal pattern. While some species passed primarily during the day, others showed a distinct nocturnal pattern. Lunar phase and water temperature also strongly affected passage of some taxa. Rainfall and dam discharge had a small or null influence on most taxa; perhaps due to the fairly small catchment area of the reservoir and the highly regulated discharge at Igarapava Dam. ?? 2009 John Wiley & Sons A/S.

Evaluation of Fish Passage at Whitewater Parks Using 2D and 3D Hydraulic Modeling

NASA Astrophysics Data System (ADS)

Hardee, T.; Nelson, P. A.; Kondratieff, M.; Bledsoe, B. P.

2016-12-01

In-stream whitewater parks (WWPs) are increasingly popular recreational amenities that typically create waves by constricting flow through a chute to increase velocities and form a hydraulic jump. However, the hydraulic conditions these structures create can limit longitudinal habitat connectivity and potentially inhibit upstream fish migration, especially of native fishes. An improved understanding of the fundamental hydraulic processes and potential environmental effects of whitewater parks is needed to inform management decisions about Recreational In-Channel Diversions (RICDs). Here, we use hydraulic models to compute a continuous and spatially explicit description of velocity and depth along potential fish swimming paths in the flow field, and the ensemble of potential paths are compared to fish swimming performance data to predict fish passage via logistic regression analysis. While 3d models have been shown to accurately predict trout movement through WWP structures, 2d methods can provide a more cost-effective and manager-friendly approach to assessing the effects of similar hydraulic structures on fish passage when 3d analysis in not feasible. Here, we use 2d models to examine the hydraulics in several WWP structures on the North Fork of the St. Vrain River at Lyons, Colorado, and we compare these model results to fish passage predictions from a 3d model. Our analysis establishes a foundation for a practical, transferable and physically-rigorous 2d modeling approach for mechanistically evaluating the effects of hydraulic structures on fish passage.

Walla Walla River Fish Passage Operations Program, 2004-2005 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bronson, James P.; Duke, Bill B.

2006-02-01

In the late 1990s, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate fish migration conditions in the basin. The migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow requirements, and providing trap and haul efforts when needed. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survivalmore » of migrating adult and juvenile salmonids in the Walla Walla River basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage criteria and passage and trapping facility design and operation. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. During the 2004-2005 project year, there were 590 adult summer steelhead, 31 summer steelhead kelts (Oncorhynchus mykiss), 70 adult bull trout (Salvelinus confluentus); 80 adult and 1 jack spring Chinook (O. tshawytscha) enumerated at the Nursery Bridge Dam fishway video counting window between December 13, 2004, and June 16, 2005. Summer steelhead and spring chinook were observed moving upstream while bull trout were observed moving both upstream and downstream of the facility. In addition, the old ladder trap was operated by ODFW in order to enumerate fish passage. Of the total, 143 adult summer steelhead and 15 summer steelhead kelts were enumerated at the west ladder at Nursery Bridge Dam during the video efforts between February 4 and May 23, 2005. Operation of the Little Walla Walla River juvenile trap for trap and haul purposes was not necessary this year.« less

Effects of grade control structures on fish passage, biological assemblages, and hydraulic environments in western Iowa streams: a multidisciplinary review

USGS Publications Warehouse

Thomas, J.T.; Culler, M.E.; Dermisis, D.C.; Pierce, Clay; Papanicolaou, A.N.; Stewart, T.W.; Larson, C.J.

2011-01-01

Land use changes and channelization of streams in the deep loess region of western Iowa have led to stream channel incision, altered flow regimes, increased sediment inputs, decreased habitat diversity and reduced lateral connectivity of streams and floodplains. Grade control structures (GCSs) are built in streams to prevent further erosion, protect infrastructure and reduce sediment loads. However, GCS can have a detrimental impact on fisheries and biological communities. We review three complementary biological and hydraulic studies on the effects of GCS in these streams. GCS with steep (≥1:4 rise : run) downstream slopes severely limited fish passage, but GCS with gentle slopes (≤1:15) allowed greater passage. Fish assemblages were dominated by species tolerant of degradation, and Index of Biotic Integrity (IBI) scores were indicative of fair or poor biotic integrity. More than 50% of fish species had truncated distributions. After modification of GCS to reduce slopes and permit increased passage, IBI scores increased and several species were detected further upstream than before modification. Total macroinvertebrate density, biomass and taxonomic diversity and abundance of ecologically sensitive taxa were greater at GCS than in reaches immediately upstream, downstream or ≥1 km from GCS. A hydraulic study confirmed results from fish passage studies; minimum depths and maximum current velocities at GCS with gentle slopes (≤1:15) were more likely to meet minimum criteria for catfish passage than GCS with steeper slopes. Multidisciplinary approaches such as ours will increase understanding of GCS-associated factors influencing fish passage, biological assemblage structure and other ecological relationships in streams.

Investigating passage of ESA-listed juvenile fall Chinook salmon at Lower Granite Dam during winter when the fish bypass system is not operated. 2006 Annual Report

USGS Publications Warehouse

Tiffan, Kenneth F.; Kock, Tobias J.; Connor, William P.

2007-01-01

During the winter of 2005-06, we radio and PIT tagged and released 48 juvenile fall Chinook salmon to evaluate over-wintering behavior and dam passage in the lower Snake River, Washington. Fish were released at the upstream end of the Lower Granite Dam forebay in November and December 2005. Fixed radio telemetry detection sites located in forebay and tailrace areas of Lower Granite, Little Goose, Lower Monumental and Ice Harbor dams were used to monitor fish movements and dam passage through early-May 2006. Of the 48 fish released during our study, 39 (81 %) passed Lower Granite Dam and were detected at downstream detection sites, 29 (60%) passed Little Goose Dam, 25 (52%) passed Lower Monumental Dam, and 15 (31%) passed Ice Harbor Dam. Thirty-seven (95%), 23 (79%), 16 (64%), and 9 (60%) of the fish that passed Lower Granite, Little Goose, Lower Monumental, and Ice Harbor dams respectively, did so when the fish bypass system was not operated. Passage of tagged fish past lower Snake River dams generally declined during the winter, but increased again after bypass began in April. Fish residence times in reservoirs and forebays was lengthy during the winter (up to 118 d), and varied by reservoir and time of year. We observed no diel passage trends. Only 15 of the 48 fish were subsequently detected at a PIT-tag interrogation site the following spring. We believe that passage of overwintering juvenile fall Chinook salmon during winter is due more to chance than directed downstream movement. Since the primary route of passage during the winter is through powerhouse turbines, the potential exists for increased mortality for over-wintering juvenile fall Chinook salmon in the Snake River. Our findings also have implications for transportation studies of subyearling fall Chinook salmon in the Snake River. Specifically, the finding that some fish can pass undetected during the winter may bias smolt-to-adult return rate calculations that are typically used to measure the success of the aforementioned management actions.

Fish movement ecology in high gradient headwater streams: Its relevance to fish passage restoration through stream culvert barriers

USGS Publications Warehouse

Hoffman, Robert L.; Dunham, Jason B.

2007-01-01

Restoration of fish passage through culvert barriers has emerged as a major issue in the Pacific Northwest and nationwide, in part, because of their potential influence on fish movement. Movement is an essential mechanism by which mobile animals acquire the resources necessary for the successful completion of their life-cycles. In this report, we provide a brief review of some essential characteristics of animal movement and examples from a focal group of fishes in Washington State: salmon, trout, and char. We begin by outlining some basic characteristics of animal movement and then apply that foundation to the case of salmonid fishes. Next we consider the consequences of disrupting fish movement with human-constructed barriers, such as culverts. Finally, this body of evidence is summarized, and we propose a short list of what we view as high priority information needs to support more effective restoration of fish passage through culverts.

The Application of Traits-Based Assessment Approaches to Estimate the Effects of Hydroelectric Turbine Passage on Fish Populations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cada, Glenn F; Schweizer, Peter E

One of the most important environmental issues facing the hydropower industry is the adverse impact of hydroelectric projects on downstream fish passage. Fish that migrate long distances as part of their life cycle include not only important diadromous species (such as salmon, shads, and eels) but also strictly freshwater species. The hydropower reservoirs that downstream-moving fish encounter differ greatly from free-flowing rivers. Many of the environmental changes that occur in a reservoir (altered water temperature and transparency, decreased flow velocities, increased predation) can reduce survival. Upon reaching the dam, downstream-migrating fish may suffer increased mortality as they pass through themore » turbines, spillways and other bypasses, or turbulent tailraces. Downstream from the dam, insufficient environmental flow releases may slow downstream fish passage rates or decrease survival. There is a need to refine our understanding of the relative importance of causative factors that contribute to turbine passage mortality (e.g., strike, pressure changes, turbulence) so that turbine design efforts can focus on mitigating the most damaging components. Further, present knowledge of the effectiveness of turbine improvements is based on studies of only a few species (mainly salmon and American shad). These data may not be representative of turbine passage effects for the hundreds of other fish species that are susceptible to downstream passage at hydroelectric projects. For example, there are over 900 species of fish in the United States. In Brazil there are an estimated 3,000 freshwater fish species, of which 30% are believed to be migratory (Viana et al. 2011). Worldwide, there are some 14,000 freshwater fish species (Magurran 2009), of which significant numbers are susceptible to hydropower impacts. By comparison, in a compilation of fish entrainment and turbine survival studies from over 100 hydroelectric projects in the United States, Winchell et al. (2000) found useful turbine passage survival data for only 30 species. Tests of advanced hydropower turbines have been limited to seven species - Chinook and coho salmon, rainbow trout, alewife, eel, smallmouth bass, and white sturgeon. We are investigating possible approaches for extending experimental results from the few tested fish species to predict turbine passage survival of other, untested species (Cada and Richmond 2011). In this report, we define the causes of injury and mortality to fish tested in laboratory and field studies, based on fish body shape and size, internal and external morphology, and physiology. We have begun to group the large numbers of unstudied species into a small number of categories, e.g., based on phylogenetic relationships or ecological similarities (guilds), so that subsequent studies of a few representative species (potentially including species-specific Biological Index Testing) would yield useful information about the overall fish community. This initial effort focused on modifying approaches that are used in the environmental toxicology field to estimate the toxicity of substances to untested species. Such techniques as the development of species sensitivity distributions (SSDs) and Interspecies Correlation Estimation (ICE) models rely on a considerable amount of data to establish the species-toxicity relationships that can be extended to other organisms. There are far fewer studies of turbine passage stresses from which to derive the turbine passage equivalent of LC{sub 50} values. Whereas the SSD and ICE approaches are useful analogues to predicting turbine passage injury and mortality, too few data are available to support their application without some form of modification or simplification. In this report we explore the potential application of a newer, related technique, the Traits-Based Assessment (TBA), to the prediction of downstream passage mortality at hydropower projects.« less

Evaluation of Fish Passage Sites in the Walla Walla River Basin, 2008

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chamness, Mickie A.

2008-08-29

In 2008, Pacific Northwest National Laboratory evaluated the Hofer Dam fish screen and provided technical assistance at two other fish passage sites as requested by the Bonneville Power Administration, the Walla Walla Watershed Council, or the Confederated Tribes of the Umatilla Indian Reservation. Evaluation of new sites such as Hofer Dam focuses on their design, construction, operation, and maintenance to determine if they effectively provide juvenile salmonids with safe passage through irrigation diversions. There were two requests for technical assistance in 2008. In the first, the Confederated Tribes of the Umatilla Indian Reservation requested an evaluation of the Nursery Bridgemore » fish screens associated with the fish ladder on the east side of the Walla Walla River. One set of brushes that clean the screens was broken for an extended period. Underwater videography and water velocity measurements were used to determine there were no potential adverse effects on juvenile salmonids when the west set of screens was clean enough to pass water normally. A second request, received from the National Marine Fisheries Service and the Walla Walla Watershed Council, asked for evaluation of water velocities through relatively new head gates above and adjacent to the Eastside Ditch fish screens on the Walla Walla River. Water moving through the head gates and not taken for irrigation is diverted to provide water for the Nursery Bridge fish ladder on the east side of the river. Elevations used in the design of the head gates were incorrect, causing excessive flow through the head gates that closely approached or exceeded the maximum swimming burst speed of juvenile salmonids. Hofer Dam was evaluated in June 2008. PNNL researchers found that conditions at Hofer Dam will not cause impingement or entrainment of juvenile salmonids but may provide habitat for predators and lack strong sweeping flows to encourage juvenile salmonid passage downstream. Further evaluation of velocities at the Eastside Ditch and wasteway gates should occur as changes are made to compensate for the design problems. These evaluations will help determine whether further changes are required. Hofer Dam also should be evaluated again under more normal operating conditions when the river levels are typical of those when fish are emigrating and the metal plate is not affecting flows.« less

Investigating passage of ESA-listed juvenile fall Chinook salmon at Lower Granite Dam during winter when the fish bypass system is not operated

USGS Publications Warehouse

Kock, Tobias J.; Tiffan, Kenneth F.; Connor, William P.

2007-01-01

During the winter of 2006-07, we radio and passive integrated transponder (PIT) tagged, and released 99 juvenile fall Chinook salmon to evaluate over-wintering behavior and dam passage in the lower Snake River, Washington. All fish were released 10 km upstream of Lower Granite Dam at Granite Point in early November, 2006. Fixed radio telemetry detection sites located in the forebay and tailrace areas of Lower Granite, Little Goose, Lower Monumental, Ice Harbor, Bonneville dams, and at Lyle, Washington were used to monitor fish movements and dam passage through early-May 2007. Of the 99 fish released during our study, 80 passed Lower Granite Dam and were detected at downstream detection sites, 37 passed Little Goose Dam, 41 passed Lower Monumental Dam, 31 passed Ice Harbor Dam, 18 passed Lyle, WA, and 13 passed Bonneville Dam. Of the fish that passed Lower Granite Dam in the fall, 63 fish did so during the extended bypass period from November 1 through December 16. Of these fish, 53 were also detected by the PIT-tag interrogation system. Fifteen of the fish that passed Lower Granite Dam in the fall continued to pass lower Snake River dams and exit the system by the end of January. The remaining fish either died, their tags failed, or they resided in Little Goose Reservoir until spring when relatively few continued their seaward migration. Passage of tagged fish past lower Snake River dams generally declined during the winter as temperatures decreased, but increased again in the spring as temperatures and flows increased. Fish residence times in reservoirs and forebays was lengthy during the winter (up to 160 d), and varied by reservoir and time of year. We observed no diel trends in fish passage. Very few fish were detected at PIT-tag interrogation sites in the spring compared to detection by radio telemetry detection sites indicating that fish may have passed via spill. We believe that passage of overwintering juvenile fall Chinook salmon during winter is due more to chance than directed downstream movement. Since the primary route of passage during the winter is through powerhouse turbines, the potential exists for increased mortality for over-wintering juvenile fall Chinook salmon in the Snake River. Our findings that some fish can pass undetected during the winter likely bias traditional smolt-to-adult return rate calculations that are typically used to measure the success of juvenile transportation studies.

Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1990 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hawkes, Lynette A.

1991-03-01

The seaward migration of salmonid smolts was monitored by the National Marine Fisheries Service (NMFS) at three sites on the Columbia River system in 1990. This project is a part of the continuing Smolt Monitoring Program to monitor Columbia Basin salmonid stocks coordinated by the Fish Passage Center (FPC) for the Columbia Basin Fish and Wildlife Agencies and Indian Tribes. It's purpose is to provide timely data to the Fish Passage Managers for in season flow and spill management for fish passage and post-season analysis for travel time, relative magnitude and timing and the smolt migration. This program is carriedmore » out under the auspices of the Northwest Power Planning Council Fish and Wildlife Program and is funded by the Bonneville Power Administration (BPA). Sampling sites were John Day and Bonneville Dams under the Smolt Monitoring program, and the Dallas Dam under the Fish Spill Memorandum of Agreement'' for 1990. All pertinent fish capture, condition and brand data, as well as dam operations and river flow data were reported daily to FPC. These data were incorporated into the FPC Fish Passage Data Information System (FPDIS). 10 refs., 8 figs., 1 tab.« less

Survival and Passage of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead at McNary Dam, 2012

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hughes, James S.; Weiland, Mark A.; Woodley, Christa M.

The study was designed to evaluate the passage and survival of yearling and subyearling Chinook salmon and juvenile steelhead at McNary Dam as stipulated by the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a virtual/paired-release model. This study supports the USACE’s continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.

Transport, dam passage, and size selection of adult Atlantic Salmon in the Penobscot River, Maine

USGS Publications Warehouse

Sigourney, Douglas B.; Zydlewski, Joseph D.; Hughes, Edward; Cox, Oliver

2015-01-01

Prior to 2012, returning adult Atlantic Salmon Salmo salar had to pass through fishways at three dams in the lower section of the Penobscot River, Maine: Veazie Dam (river kilometer [rkm] 48; removed in 2013), Great Works Dam (rkm 60; removed in 2012), and Milford Dam (rkm 62). To facilitate better passage through the lower river, a fish transport program was implemented in 2010 and 2011. Fish were captured at Veazie Dam and were either transported by truck above Milford Dam (TRKD group) or released into the head pond above Veazie Dam (run-of-the-river [ROR] group). To assess the efficacy of transport, we used PIT telemetry to compare the performance and passage of TRKD and ROR fish based on their (1) success in reaching one of the three dams upstream of Milford Dam, (2) time taken to reach an upstream dam (transit time), and (3) success in passing that upstream dam. In both years, the percentage of fish detected at upstream dams was higher for the TRKD group (82.4% in 2010; 78.6% in 2011) than for the ROR group (41.3% in 2010; 22.4% in 2011). In addition, median transit time was faster for TRKD fish (7 d in 2010; 5 d in 2011) than for ROR fish (23 d in 2010; 25 d in 2011). However, passage success through the upstream dams did not differ between the two release groups. Our analysis also revealed a strong, negative size-selective force on dam passage: larger fish were consistently less likely to successfully pass dams than smaller fish. Finally, environmental conditions also influenced passage success. Our analysis shows that the transport of adult Atlantic Salmon can be an effective means by which to increase migration success in systems where upstream passage is poor.

Evaluation of nature-like and technical fishways for the passage of alewives at two coastal streams in New England

USGS Publications Warehouse

Franklin, Abigail E.; Haro, Alex; Castro-Santos, Theodore; Noreika, John

2012-01-01

Nature-like fishways have been designed with the intent to reconnect river corridors and provide passage for all species occurring in a system. The approach is gaining popularity both in Europe and North America, but performance of these designs has not been quantitatively evaluated in a field setting for any North American species. Two nature-like fishways and three technical fishways in New England were evaluated for passage of anadromous adult alewives Alosa pseudoharengus by using passive integrated transponder (PIT) telemetry. A perturbation boulder rock ramp (32 m long; 4.2% slope) constructed in Town Brook (Plymouth, Massachusetts) passed 94% of the fish that made passage attempts, with most fish ascending the ramp in less than 22 min. In the East River (Guilford, Connecticut), a step-pool bypass design (48 m long; 7.1% slope) passed only 40% of attempting fish, with a median transit time of 75 min. In Town Brook, a technical pool-and-weir fishway (14 m long; 14.3% slope) exhibited poor entry and poor passage for the fish. In contrast, in the East River, two technical steeppass fishways (3 m long; 29.6% and 9.6% slopes) passed the majority of available fish, although one of these steeppass fishways may have lacked sufficient flow to attract fish to the entrance. In both Town Brook and the East River, tagged fish passed rapidly downstream through all fishways after spawning. In the East River, the amount of time fish spent in the spawning habitat before migrating downstream ranged from 1 to 41 d. These studies demonstrate that some nature-like and technical fishway designs can effectively facilitate passage of alewives, but a fishway's location in relation to a spillway is important, and further evaluations are required to more precisely identify the influence of the vertical drop per pool and the specific local hydraulics on alewife behaviors and passage performance.

Summary of juvenile salmonid passage and survival at McNary Dam-Acoustic survival studies, 2006-09

USGS Publications Warehouse

Adams, Noah S.; Evans, Scott D.

2011-01-01

Passage and survival data were collected at McNary Dam between 2006 and 2009. These data have provided critical information for resource managers to implement structural and operational changes designed to improve the survival of juvenile salmonids as they migrate past the dam. Given the importance of these annual studies, the primary objectives of this report were to summarize the findings of these annual studies to ensure that passage and survival metrics are consistently calculated and reported across all years and to consolidate this information in a single document, thereby making it easier to reference. It is worth noting that this report does not contain all the information from all the annual reports. The intent of this report was to summarize the key findings from multiple years of research. The reader is encouraged to reference the annual reports if more detailed information is needed. Chapter 1 summarizes existing behavior, passage, and survival results for fish released 10 rkm upstream of McNary Dam and from the McNary Dam tailrace during 2006-09. Chapter 2 summarizes existing behavior, passage, and survival results for fish released in the mid-Columbia River and detected at McNary Dam during 2006-09. Results from 2006 indicated that higher spill discharge generally resulted in higher fish passage through spill, and in turn, higher fish survival through the entire dam. Within the spillway, passage effectiveness was highest for the south spill bays, adjacent to the powerhouse. Increased passage in this area, combined with detailed 3-dimensional approach paths, aided in the design and location of the temporary spillway weirs (TSWs) at McNary Dam prior to the 2007 migration of juvenile salmonids. During the 2007 study, the TSWs were tested under two spill treatments during the spring and summer: a "2006 Modified spill," and a "2007 test spill." In the spring, slightly higher discharge through spill bays 14-17 was the primary difference between the spill treatments tested. During the summer, spill treatments were characterized by a high (60 percent) and low (40 percent) percent flow of the total discharge going through the spillway. Flow through the TSWs represented about 7-8 percent of total project discharge in spring and about 10-11 percent of total project discharge in summer. Overall, the TSWs passed 24 percent of yearling Chinook salmon and 27 percent of subyearling Chinook salmon, but passed about 65 percent of juvenile steelhead. In spring, there was little evidence for an effect of spill treatment on either fish passage or survival, however, this was not surprising given there was a relatively small difference between spill treatments. For subyearling Chinook salmon during the summer study, high spill discharge resulted in higher fish passage through the spillway and lower fish passage through the powerhouse. Season wide survival (paired-release) for yearling and subyearling Chinook salmon was 0.98 and 0.92 (SE<0.04) through TSW 20, and 0.96 and 0.97 (SE<0.04) through TSW 22, respectively. Season-wide survival (single-release) for juvenile steelhead was 0.98 (SE=0.024) through TSW 20, and 0.90 (SE=0.02) through TSW 22. The extent to which location and structural design contributed to the differences observed between the two TSWs was uncertain. Nonetheless, the TSWs performed similarly to surface-oriented fish passage structures at other locations and appear to be a useful fish passage alternative at McNary Dam. The 2008 and 2009 studies confirmed previous results showing high survival for fish passing through the TSWs, especially juvenile steelhead. Although the number of all fish species passing through the TSWs was lower in 2008 and 2009 compared to 2007, fish passage efficiency for juvenile steelhead and subyearling Chinook salmon was higher in years with the TSWs, compared to 2006, before the TSWs were in place.

76 FR 71070 - Draft Programmatic Environmental Impact Statement for the Integrated Water Resource Management...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-16

... basin water supplies. Initial efforts in the mid-1980s (Phase 1) focused on improving fish passage by... initiated a separate evaluation of the Yakima basin's water supply problems, including consideration of... wildlife habitat, dry-year irrigation demands, and municipal water supply demands. Specific needs that the...

Hydroacoustic Evaluation of Fish Passage Through Bonneville Dam in 2005

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ploskey, Gene R.; Weiland, Mark A.; Zimmerman, Shon A.

2006-12-04

The Portland District of the U.S. Army Corps of Engineers requested that the Pacific Northwest National Laboratory (PNNL) conduct fish-passage studies at Bonneville Dam in 2005. These studies support the Portland District's goal of maximizing fish-passage efficiency (FPE) and obtaining 95% survival for juvenile salmon passing Bonneville Dam. Major passage routes include 10 turbines and a sluiceway at Powerhouse 1 (B1), an 18-bay spillway, and eight turbines and a sluiceway at Powerhouse 2 (B2). In this report, we present results of two studies related to juvenile salmonid passage at Bonneville Dam. The studies were conducted between April 16 and Julymore » 15, 2005, encompassing most of the spring and summer migrations. Studies included evaluations of (1) Project fish passage efficiency and other major passage metrics, and (2) smolt approach and fate at B1 Sluiceway Outlet 3C from the B1 forebay. Some of the large appendices are only presented on the compact disk (CD) that accompanies the final report. Examples include six large comma-separated-variable (.CSV) files of hourly fish passage, hourly variances, and Project operations for spring and summer from Appendix E, and large Audio Video Interleave (AVI) files with DIDSON-movie clips of the area upstream of B1 Sluiceway Outlet 3C (Appendix H). Those video clips show smolts approaching the outlet, predators feeding on smolts, and vortices that sometimes entrained approaching smolts into turbines. The CD also includes Adobe Acrobat Portable Document Files (PDF) of the entire report and appendices.« less

Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, Spring 2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam

2012-02-01

The study was designed to estimate dam passage survival at John Day Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and to provide additional fish passage performance measures at that site as stipulated in the Columbia Basin Fish Accords.

Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, Spring 2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam

The study was designed to estimate dam passage survival at John Day Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and to provide additional fish passage performance measures at that site as stipulated in the Columbia Basin Fish Accords.

Proceedings of a workshop on American Eel passage technologies

USGS Publications Warehouse

Haro, Alexander J.

2013-01-01

Recent concerns regarding a decline in recruitment of American eels (Anguilla rostrata) have prompted efforts to restore this species to historic habitats by providing passage for both upstream migrant juveniles and downstream migrant adults at riverine barriers, including low-head and hydroelectric dams (Castonguay et al. 1994, Haro et al. 2000). These efforts include development of management plans and stock assessment reviews in both the US and Canada (COSEWIC 2006, Canadian Eel Working Group 2009, DFO 2010, MacGregor et al. 2010, ASMFC 2000, ASMFC 2006, ASMFC 2008, Williams and Threader 2007), which target improvement of upstream and downstream passage for eels, as well as identification and prioritization of research needs for development of new and more effective passage technologies for American eels. Traditional upstream fish passage structures, such as fishways and fish lifts, are often ineffective passing juvenile eels, and specialized passage structures for this species are needed. Although designs for such passage structures are available and diverse (Knights and White 1998, Porcher 2002, FAO/DVWK 2002, Solomon and Beach 2004a,b, Environment Agency UK 2011), many biologists, managers, and engineers are unfamiliar with eel pass design and operation, or unaware of the technical options available for upstream eel passage, Better coordination is needed to account for eel passage requirements during restoration efforts for other diadromous fish species. Also, appropriately siting eel passes at hydropower projects is critical, and siting can be difficult and complex due to physical restrictions in access to points of natural concentrations of eels, dynamic hydraulics of tailrace areas, and presence of significant competing flows from turbine outfalls or spill. As a result, some constructed eel passes are sited poorly and may pass only a fraction of the number of eels attempting to pass the barrier. When sited and constructed appropriately, however, eel passes can effectively pass thousands of individuals in a season (Appendix D). technologies for preventing impingement and entrainment mortality and injury of downstream migrant eels at hydropower projects are not well developed. Traditional downstream fish passage mitigative techniques originally developed for salmonids and other species are frequently ineffective passing eels (Richkus and Dixon 2003, EPRI 2001, Bruijs and Durif 2009). Large hydropower projects, with high project flows or intake openings that cannot be fitted with racks or screens with openings small enough to exclude eels, pose significant passage problems for this species, and turbine impingement and entrainment mortality of eels can be as high as 100%. Spill mortality and injury may also be significant for eels, given their tendency to move during high flow events when projects typically spill large amounts of flow. Delays in migration of eels that have difficulty locating and utilizing bypass entrances can also be significant. Therefore, downstream passage technologies are at a much more nebulous state of development than upstream passage technologies, and require further evaluation and improvement before rigorous design guidelines can be established. There have been few studies conducted to evaluate effectiveness of current mitigative measures for both upstream and downstream passage of eels. Research is needed to determine eel migratory timing, behavior, and appropriate mitigation technologies for specific sites and eel life history stages. Both upstream and downstream eel passage structures can be difficult to evaluate in terms of performance, and examples of how evaluation and monitoring can be accomplished were reviewed at the workshop.

Planning Guide for Fish Passage at Pittsburgh District Dams

DTIC Science & Technology

2013-08-01

attracted to a downstream flow at the entrance gate of the lift. 2) Immigrants pass around a moveable crowder that, when engaged, forces fish into the...might influence fish passage over a large number of sites. REFERENCES Bailey, M. M., J. J. Isely, and W. C. Bridges , Jr. 2004. Movement and

Walla Walla River Fish Passage Operations Program, 2000-2001 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zimmerman, Brian C.; Duke, Bill B.

2004-02-01

In the late 1990's, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate migration conditions in the basin. The migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow measures, and initiating trap and haul efforts. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survival of migrating adultmore » and juvenile salmonids in the basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage criteria and passage and trapping facility design and operation. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. During the 2000-2001 project year, there were 624 summer steelhead (Oncorhynchus mykiss), 24 bull trout (Salvelinus confluentus), and 47 spring chinook (O. tshawytscha) counted at the Nursery Bridge Dam adult trap between December 27, 2000 and June 7, 2001. The Little Walla Walla River juvenile trap was not operated this year. The project transported 1600 adult spring chinook from Ringold Springs Hatchery to the South Fork Walla Walla Brood Holding Facility and outplanted 1156 for natural spawning in the basin. The project also provided equipment for transportation of juveniles captured during the construction fish salvage at Nursery Bridge Dam.« less

Upstream movements of Atlantic Salmon in the Lower Penobscot River, Maine following two dam removals and fish passage modifications

USGS Publications Warehouse

Izzo, Lisa K.; Maynard, George A.; Zydlewski, Joseph D.

2016-01-01

The Penobscot River Restoration Project (PRRP), to be completed in 2016, involved an extensive plan of dam removal, increases in hydroelectric capacity, and fish passage modifications to increase habitat access for diadromous species. As part of the PRRP, Great Works and Veazie dams were removed, making Milford Dam the first impediment to federally endangered Atlantic Salmon Salmo salar. Upstream habitat access for Atlantic Salmon is dependent upon successful and timely passage at Milford Dam because nearly all suitable spawning habitat is located upstream. In 2014 and 2015, a total of 73 adult salmon were radio-tagged to track their upstream movements through the Penobscot River to assess potential delays at (1) the dam remnants, (2) the confluence of the Stillwater Branch and the main stem of the Penobscot River below the impassable Orono Dam, and (3) the Milford Dam fish lift (installed in 2014). Movement rates through the dam remnants and the Stillwater confluence were comparable to open river reaches. Passage efficiency of the fish lift was high in both years (95% and 100%). However, fish experienced long delays at Milford Dam, with approximately one-third of fish taking more than a week to pass in each year, well below the Federal Energy Regulatory Commission passage standard of 95% within 48 h. Telemetry indicates most fish locate the fishway entrance within 5 h of arrival and were observed at the entrance at all hours of the day. These data indicate that overall transit times through the lower river were comparable to reported movement rates prior to changes to the Penobscot River due to the substantial delays seen at Milford Dam. The results of this study show that while adult Atlantic Salmon locate the new fish lift entrance quickly, passage of these fish was significantly delayed under 2014–2015 operations.

Effects of tow transit on the efficacy of the Chicago Sanitary and Ship Canal Electric Dispersal Barrier System

USGS Publications Warehouse

Davis, Jeremiah J.; LeRoy, Jessica Z.; Shanks, Matthew R.; Jackson, Patrick Ryan; Engel, Frank; Murphy, Elizabeth; Baxter, Carey L.; McInerney, Michael K.; Barkowski, Nicholas A.

2017-01-01

In 2016, the U.S. Fish and Wildlife Service, U.S. Geological Survey, and U.S. Army Corps of Engineers undertook a field study in the Chicago Sanitary and Ship Canal near Romeoville, Illinois to determine the influence of tow transit on the efficacy of the Electric Dispersal Barrier System (EDBS) in preventing the passage of juvenile fish (total length < 100 millimeters (mm)). Dual-frequency identification sonar data showed that large schools of juvenile fish (mean school size of 120 fish; n = 19) moved upstream and crossed the electric field of an array in the EDBS concurrent with downstream-bound (downbound) loaded tows in 89.5% of trials. Smaller schools of juvenile fish (mean school size of 98 fish; n = 15) moved downstream and crossed the electric field of an array in the EDBS concurrent with upstream-bound (upbound) loaded tows in 73.3% of trials. Observed fish passages through the EDBS were always opposite to the direction of tow movement, and not associated with propeller wash. These schools were not observed to breach the EDBS in the absence of a tow and showed no signs of incapacitation in the barrier during tow passage. Loaded tows transiting the EDBS create a return current of water flowing between the tow and the canal wall that typically travels opposite the direction of tow movement, and cause a decrease in the voltage gradient of the barrier of up to 88%. Return currents and decreases in voltage gradients induced by tow passage likely contributed to the observed fish passage through the EDBS. The efficacy of the EDBS in preventing the passage of small, wild fish is compromised while tows are moving across the barrier system. In particular, downbound tows moving through the EDBS create a pathway for the upstream movement of small fish, and therefore may increase the risk of transfer of invasive fishes from the Mississippi River Basin to the Great Lakes Basin.

Migration depth and residence time of juvenile salmonids in the forebays of hydropower dams prior to passage through turbines or juvenile bypass systems: implications for turbine-passage survival.

PubMed

Li, Xinya; Deng, Zhiqun D; Brown, Richard S; Fu, Tao; Martinez, Jayson J; McMichael, Geoffrey A; Skalski, John R; Townsend, Richard L; Trumbo, Bradly A; Ahmann, Martin L; Renholds, Jon F

2015-01-01

Little is known about the three-dimensional depth distributions in rivers of individually marked fish that are in close proximity to hydropower facilities. Knowledge of the depth distributions of fish approaching dams can be used to understand how vulnerable fish are to injuries such as barotrauma as they pass through dams. To predict the possibility of barotrauma injury caused by pressure changes during turbine passage, it is necessary to understand fish behaviour relative to acclimation depth in dam forebays as they approach turbines. A guiding study was conducted using high-resolution three-dimensional tracking results of salmonids implanted with Juvenile Salmon Acoustic Telemetry System transmitters to investigate the depth distributions of subyearling and yearling Chinook salmon (Oncorhynchus tshawytscha) and juvenile steelhead (Oncorhynchus mykiss) passing two dams on the Snake River in Washington State. Multiple approaches were evaluated to describe the depth at which fish were acclimated, and statistical analyses were performed on large data sets extracted from ∼28 000 individually tagged fish during 2012 and 2013. Our study identified patterns of depth distributions of juvenile salmonids in forebays prior to passage through turbines or juvenile bypass systems. This research indicates that the median depth at which juvenile salmonids approached turbines ranged from 2.8 to 12.2 m, with the depths varying by species/life history, year, location (which dam) and diel period (between day and night). One of the most enlightening findings was the difference in dam passage associated with the diel period. The amount of time that turbine-passed fish spent in the immediate forebay prior to entering the powerhouse was much lower during the night than during the day. This research will allow scientists to understand turbine-passage survival better and enable them to assess more accurately the effects of dam passage on juvenile salmon survival.

Migration depth and residence time of juvenile salmonids in the forebays of hydropower dams prior to passage through turbines or juvenile bypass systems: implications for turbine-passage survival

PubMed Central

Li, Xinya; Deng, Zhiqun D.; Brown, Richard S.; Fu, Tao; Martinez, Jayson J.; McMichael, Geoffrey A.; Skalski, John R.; Townsend, Richard L.; Trumbo, Bradly A.; Ahmann, Martin L.; Renholds, Jon F.

2015-01-01

Little is known about the three-dimensional depth distributions in rivers of individually marked fish that are in close proximity to hydropower facilities. Knowledge of the depth distributions of fish approaching dams can be used to understand how vulnerable fish are to injuries such as barotrauma as they pass through dams. To predict the possibility of barotrauma injury caused by pressure changes during turbine passage, it is necessary to understand fish behaviour relative to acclimation depth in dam forebays as they approach turbines. A guiding study was conducted using high-resolution three-dimensional tracking results of salmonids implanted with Juvenile Salmon Acoustic Telemetry System transmitters to investigate the depth distributions of subyearling and yearling Chinook salmon (Oncorhynchus tshawytscha) and juvenile steelhead (Oncorhynchus mykiss) passing two dams on the Snake River in Washington State. Multiple approaches were evaluated to describe the depth at which fish were acclimated, and statistical analyses were performed on large data sets extracted from ∼28 000 individually tagged fish during 2012 and 2013. Our study identified patterns of depth distributions of juvenile salmonids in forebays prior to passage through turbines or juvenile bypass systems. This research indicates that the median depth at which juvenile salmonids approached turbines ranged from 2.8 to 12.2 m, with the depths varying by species/life history, year, location (which dam) and diel period (between day and night). One of the most enlightening findings was the difference in dam passage associated with the diel period. The amount of time that turbine-passed fish spent in the immediate forebay prior to entering the powerhouse was much lower during the night than during the day. This research will allow scientists to understand turbine-passage survival better and enable them to assess more accurately the effects of dam passage on juvenile salmon survival. PMID:27293685

Performance of fish passage structures at upstream barriers to migration

USGS Publications Warehouse

Bunt, C.M.; Castro-Santos, T.; Haro, A.

2012-01-01

Attraction and passage efficiency were reviewed and compared from 19 monitoring studies that produced data for evaluations of pool-and-weir, Denil, vertical-slot and nature-like fishways. Data from 26 species of anadromous and potamodromous fishes from six countries were separated by year and taxonomic family into a matrix with 101 records. Attraction performance was highly variable for the following fishway structures: pool-and-weir (attraction range = 29–100%, mean = 77%, median = 81%), vertical-slot (attraction range = 0–100%, mean = 63%, median = 80%), Denil (attraction range = 21–100%, mean = 61%, median = 57%) and nature-like (attraction range = 0–100%, mean = 48%, median = 50%). Mean passage efficiency was inversely related to mean attraction efficiency by fishway structure type, with the highest passage for nature-like fishways (range = 0–100%, mean = 70%, median = 86%), followed by Denil (range = 0–97%, mean = 51%, median = 38%), vertical-slot (range = 0–100%, mean = 45%, median = 43%) and pool-and-weir (range = 0–100%, mean = 40%, median = 34%). Principal components analysis and logistic regression modelling indicated that variation in fish attraction was driven by biological characteristics of the fish that were studied, whereas variation in fish passage was related to fishway type, slope and elevation change. This meta-analysis revealed that the species of fish monitored and structural design of the fishways have strong implications for both attraction and passage performance, and in most cases, existing data are not sufficient to support design recommendations. Many more fishway evaluations are needed over a range of species, fishway types and configurations to characterize, to optimize and to design new fishways. Furthermore, these studies must be performed in a consistent manner to identify the relative contributions of fish attraction and passage to overall fishway performance at each site.

Washington Phase II Fish Diversion Screen Evaluations in the Yakima and Touchet River Basins, 2005-2006 Annual Reports.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chamness, Mickie; Abernethy, C.; Tunnicliffe, Cherylyn

2006-02-01

In 2005, Pacific Northwest National Laboratory (PNNL) researchers evaluated 25 Phase II fish screen sites in the Yakima and Touchet river basins. Pacific Northwest National Laboratory performs these evaluations for Bonneville Power Administration (BPA) to determine whether the fish screening devices meet National Marine Fisheries Service (NMFS) criteria to promote safe and timely fish passage. Evaluations consist of measuring velocities in front of the screens, using an underwater camera to look at the condition and environment in front of the screens, and noting the general condition and operation of the sites. Results of the evaluations in 2005 include the following:more » (1) Most approach velocities met the NMFS criterion of less than or equal to 0.4 fps. Less than 13% of all approach measurements exceeded the criterion, and these occurred at 10 of the sites. Flat-plate screens had more problems than drum screens with high approach velocities. (2) Bypass velocities generally were greater than sweep velocities, but sweep velocities often did not increase toward the bypass. The latter condition could slow migration of fish through the facility. (3) Screen and seal materials generally were in good condition. (4) Automated cleaning brushes generally functioned properly; chains and other moving parts were typically well-greased and operative. (5) Washington Department of Fish and Wildlife (WDFW) and U.S. Bureau of Reclamation (USBR) generally operate and maintain fish screen facilities in a way that provides safe passage for juvenile fish. (6) In some instances, irrigators responsible for specific maintenance at their sites (e.g., debris removal) are not performing their tasks in a way that provides optimum operation of the fish screen facility. New ways need to be found to encourage them to maintain their facilities properly. (7) We recommend placing datasheets providing up-to-date operating criteria and design flows in each sites logbox. The datasheet should include bypass design flows and a table showing depths of water over the weir and corresponding bypass flow. This information is available at some of the sites but may be outdated. These data are used to determine if the site is running within design criteria. (8) Modifying use of debris control plates at Gleed helped minimize the extreme fluctuations in flow, but approach velocities are still too high. Other ways to reduce the approach velocities need to be tried, possibly including redesign of the site. (9) Alternatives to a screen site at Taylor should be considered. A lot of effort was spent trying to increase water to the site, but it still was unable to operate within NMFS criteria for most of the year and may be a hazard to juvenile salmonids. We conclude that the conditions at most of the Phase II fish screen facilities we evaluated in 2005 would be expected to provide safe passage for juvenile fish. For those sites where conditions are not always optimum for safe fish passage, PNNL researchers will try to coordinate with the WDFW and USBR in 2006 to find solutions to the problems. Some of those problems are consistently high approach velocities at specific sites, including Congdon, Naches-Selah, Union Gap, and Yakima-Tieton. We would like to be able to monitor changes in velocities as soon as operations and maintenance personnel adjust the louvers or porosity boards at these sites. This will give them immediate feedback on the results of their modifications and allow additional adjustments as necessary until the conditions meet NMFS criteria. Pacific Northwest National Laboratory has performed evaluations at many of these sites over the past 8 years, providing information WDFW and USBR personnel can use to perform their operations and maintenance more effectively. Consequently, overall effectiveness of the screens facilities has improved over time.« less

Upper York Creek Dam Removal, Fish Passage, and Ecosystem Restoration

EPA Pesticide Factsheets

Information about the Upper York Creek Dam Removal, Fish Passage, and Ecosystem Restoration part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquatic resources.

Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing through Bonneville Dam, 2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ploskey, Gene R.; Batten, G.; Cushing, Aaron W.

Pacific Northwest National Laboratory (PNNL) and subcontractors conducted an acoustic-telemetry study of juvenile salmonid fish passage and survival at Bonneville Dam in 2011. The study was conducted to assess the readiness of the monitoring system for official compliance studies under the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a virtual/paired-release model. The study relied on releases of live Juvenile Salmon Acoustic Telemetry System tagged smolts in the Columbia River and used acoustic telemetry to evaluate the approach, passage, and survival of passing juvenile salmon usingmore » a virtual release, paired reference release survival model. This study supports the U.S. Army Corps of Engineers’ continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.« less

Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing Through Bonneville Dam, 2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ploskey, Gene R.; Weiland, Mark A.; Hughes, James S.

Pacific Northwest National Laboratory (PNNL) and subcontractors conducted an acoustic-telemetry study of juvenile salmonid fish passage and survival at Bonneville Dam in 2010. The study was conducted to assess the readiness of the monitoring system for official compliance studies under the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a single-release model. This also was the last year of evaluation of effects of a behavioral guidance device installed in the Powerhouse 2 forebay. The study relied on releases of live Juvenile Salmon Acoustic Telemetry System taggedmore » smolts in the Columbia River and used acoustic telemetry to evaluate the approach, passage, and survival of passing juvenile salmon. This study supports the U.S. Army Corps of Engineers continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.« less

Synthesis of downstream fish passage information at projects owned by the U.S. Army Corps of Engineers in the Willamette River Basin, Oregon

USGS Publications Warehouse

Hansen, Amy C.; Kock, Tobias J.; Hansen, Gabriel S.

2017-08-07

The U.S. Army Corps of Engineers (USACE) operates the Willamette Valley Project (Project) in northwestern Oregon, which includes a series of dams, reservoirs, revetments, and fish hatcheries. Project dams were constructed during the 1950s and 1960s on rivers that supported populations of spring Chinook salmon (Oncorhynchus tshawytscha), winter steelhead (O. mykiss), and other anadromous fish species in the Willamette River Basin. These dams, and the reservoirs they created, negatively affected anadromous fish populations. Efforts are currently underway to improve passage conditions within the Project and enhance populations of anadromous fish species. Research on downstream fish passage within the Project has occurred since 1960 and these efforts are documented in numerous reports and publications. These studies are important resources to managers in the Project, so the USACE requested a synthesis of existing literature that could serve as a resource for future decision-making processes. In 2016, the U.S. Geological Survey conducted an extensive literature review on downstream fish passage studies within the Project. We identified 116 documents that described studies conducted during 1960–2016. Each of these documents were obtained, reviewed, and organized by their content to describe the state-of-knowledge within four subbasins in the Project, which include the North Santiam, South Santiam, McKenzie, and Middle Fork Willamette Rivers. In this document, we summarize key findings from various studies on downstream fish passage in the Willamette Project. Readers are advised to review specific reports of interest to insure that study methods, results, and additional considerations are fully understood.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, John R.; Townsend, Richard L.; Seaburg, Adam

The study was designed to estimate dam passage survival at Bonneville Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and to provide additional fish passage performance measures at that site as stipulated in the Columbia Basin Fish Accords.

Impact of estuary barrage construction on fish assemblages in the lower part of a river and the role of fishways as a passage

NASA Astrophysics Data System (ADS)

Yoon, Ju-Duk; Kim, Jeong-Hui; Park, Sang-Hyeon; Kim, Eve; Jang, Min-Ho

2017-03-01

The construction of an estuary barrage, an instream structure in the lower reaches of a river, causes significant physical changes in water flow patterns and river morphology, and results in altered environmental conditions. Here, we examined the impact of the Geum River estuary barrage, completed in 1990, on fish assemblages by using a literature search and fresh surveys of fishways in the barrage. We found that fish assemblages upstream and downstream of the barrage were altered following its completion. After construction, more species were found in the freshwater area, with a particularly great increase in freshwater species. Conversely, estuarine and marine species were only consistently caught in the downstream salt-water area, although the number of species increased. In total, 15,829 fish from 47 species and 20 families were identified at the three types (pool and weir, rubble type, and boat passage) of fishways in the barrage. The dominant species were Chelon haematocheilus, an estuarine species, Coilia nasus, a diadromous species, and Erythroculter erythropterus, a freshwater species. The mean total length of fish (101.9 ± 76.0 mm) in the boat passage fishway was approximately 100 mm lesser than those in the pool and weir (207.2 ± 112.8 mm) and rubble type (205.8 ± 112.7 mm) fishways. The boat passage fishway was the most efficient for fish movements. The current fishway system is not sufficient for fish migration, and thus additional ways are required to improve the system such as the boat passage. Few estuarine or diadromous species were found in both freshwater and salt-water areas, but freshwater fishes that accidently moved to salt-water area actively used fishways. Therefore, fishway management in the Geum River estuary barrage has to focus on freshwater fish; however, this may need to change to a focus on migratory fishes depending on ecological life cycles of migratory fish.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Huntington, Charles W.

If implemented, the Orofino Creek Passage Project will provide adult fish passage at barrier waterfalls on Orofino Creek, Idaho, and give anadromous salmonids access to upstream habitat. Anadromous fish are currently blocked at Orofino Falls, 8.3 km above the stream's confluence with the Clearwater River. This report summarizes results of a study to determine the potential for increasing natural production of summer steelhead (Salmo gairdneri) and spring chinook salmon (Oncorhynchus tschawytscha) in the Orofino Creek drainage by enhancing adult fish passage. Data on fish habitat, migration barriers, stream temperatures and fish populations in the drainage were collected during 1987 andmore » provided a basis for estimating the potential for self-sustaining anadromous salmonid production above Orofino Falls. Between 84.7 and 103.6 km of currently inaccessible streams would be available to anadromous fish following project implementation, depending on the level of passage enhancement above Orofino Falls. These streams contain habitat of poor to good quality for anadromous salmonids. Low summer flows and high water temperatures reduce habitat quality in lower mainstem Orofino Creek. Several streams in the upper watershed have habitat that is dominated by brook trout and may be poorly utilized by steelhead or salmon. 32 refs., 20 figs., 22 tabs.« less

Effects of barge traffic on distribution and survival of ichthyoplankton and small fishes in the upper Mississippi River

USGS Publications Warehouse

Holland, L.E.

1986-01-01

Short-term impacts of commercial barge traffic on fish eggs, larvae, young-of-the-year (age-0) fishes, and small adults in the main channel of the upper Mississippi River were examined. Barge passages caused significant changes in the distribution of eggs and larvae in the study area. The mean catch of ichthyoplankton was reduced in both surface and bottom waters for 90 min after passage of vessels downstream. The effects of upstream traffic on catch ranged from nil in surface or bottom samples to short-term increases in surface samples immediately after passage. No consistent effect on the catch of age-0 or small adult fishes in surface or bottom trawls was evident.

Behavior and passage of juvenile salmonids during the evaluation of a behavioral guidance structure at Cowlitz Falls Dam, Washington, 2011

USGS Publications Warehouse

Kock, Tobias J.; Liedtke, Theresa L.; Ekstrom, Brian K.; Tomka, Ryan G.; Rondorf, Dennis W.

2012-01-01

Turbine passage was the most common passage route for tagged fish at Cowlitz Falls Dam during 2011. We found that 40 percent of the steelhead, 52 percent of the coho salmon, and 33 percent of the Chinook salmon passed through turbines. An additional 22 percent of the steelhead and 32 percent of the coho salmon passed through turbines or spillways when both passage routes were available. Fish collection numbers were relatively low during 2011 compared to long-term averages. In total, 37 percent of the steelhead, 14 percent of the coho salmon, and 23 percent of the Chinook salmon that entered the forebay were collected, primarily through collection flumes. The FSC collected a single radio-tagged fish (a Chinook salmon) in 2011.

Survival and migration behavior of juvenile salmonids at Lower Granite Dam, 2006

USGS Publications Warehouse

Beeman, John W.; Fielding, Scott D.; Braatz, Amy C.; Wilkerson, Tamara S.; Pope, Adam C.; Walker, Christopher E.; Hardiman, Jill M.; Perry, Russell W.; Counihan, Timothy D.

2008-01-01

We described behavior and estimated passage and survival parameters of juvenile salmonids during spring and summer migration periods at Lower Granite Dam in 2006. During the spring, the study was designed to examine the effects of the Behavioral Guidance Structure (BGS) by using a randomized-block BGS Stored / BGS Deployed treatment design. The summer study was designed to compare passage and survival through Lower Granite Dam using a randomized-block design during two spill treatments while the BGS was in the stored position. We used the Route Specific Survival Model to estimate survival and passage probabilities of hatchery yearling Chinook salmon, hatchery juvenile steelhead, and hatchery and wild subyearling Chinook salmon. We also estimated fish guidance efficiency (FGE), fish passage efficiency (FPE), Removable Spillway Weir passage effectiveness (RPE), spill passage effectiveness (SPY), and combined spill and RSW passage effectiveness.

Efficacy of Single-Suture Incision Closures in Tagged Juvenile Chinook Salmon Exposed to Simulated Turbine Passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boyd, James W.; Deters, Katherine A.; Brown, Richard S.

2011-09-01

Reductions in the size of acoustic transmitters implanted in migrating juvenile salmonids have resulted in the use of a shorter incision-one that may warrant only a single suture for closure. However, it is not known whether a single suture will sufficiently hold the incision closed when fish are decompressed and when outward pressure is placed on the surgical site during turbine passage through hydroelectric dams. The objective of this study was to evaluate the effectiveness of single-suture incision closures on five response variables in juvenile Chinook salmon Oncorhynchus tshawytscha that were subjected to simulated turbine passage. An acoustic transmitter (0.43more » g in air) and a passive integrated transponder tag (0.10 g in air) were implanted in each fish; the 6-mm incisions were closed with either one suture or two sutures. After exposure to simulated turbine passage, none of the fish exhibited expulsion of transmitters. In addition, the percentage of fish with suture tearing, incision tearing, or mortal injury did not differ between treatments. Expulsion of viscera through the incision was higher among fish that received one suture (12%) than among fish that received two sutures (1%). The higher incidence of visceral expulsion through single-suture incisions warrants concern. Consequently, for cases in which tagged juvenile salmonidsmay be exposed to turbine passage, we do not recommend the use of one suture to close 6-mm incisions associated with acoustic transmitter implantation.« less

Quantifying mortal injury of juvenile Chinook salmon exposed to simulated hydro-turbine passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Carlson, Thomas J.; Gingerich, Andrew J.

A proportion of juvenile Chinook salmon and other salmonids travel through one or more turbines during seaward migration in the Columbia and Snake River every year. Despite this understanding, limited information exists on how these fish respond to hydraulic pressures found during turbine passage events. In this study we exposed juvenile Chinook salmon to varied acclimation pressures and subsequent exposure pressures (nadir) to mimic the hydraulic pressures of large Kaplan turbines (ratio of pressure change). Additionally, we varied abiotic (total dissolved gas, rate of pressure change) and biotic (condition factor, fish length, fish weight) factors that may contribute to themore » incidence of mortal injury associated with fish passing through hydro-turbines. We determined that the main factor associated with mortal injury of juvenile Chinook salmon during simulated turbine passage was the ratio between acclimation and nadir pressures. Condition factor, total dissolved gas, and the rate of pressure change were found to only slightly increase the predictive power of equations relating probability of mortal injury to conditions of exposure or characteristics of test fish during simulated turbine passage. This research will assist engineers and fisheries managers in operating and improving hydroelectric facility efficiency while minimizing mortality and injury of turbine-passed juvenile Chinook salmon. The results are discussed in the context of turbine development and the necessity of understanding how different species of fish will respond to the hydraulic pressures of turbine passage.« less

A Markov chain analysis of the movements of juvenile salmonids, including sockeye salmon, in the forebay of McNary Dam, Washington and Oregon, 2006-09

USGS Publications Warehouse

Adams, Noah S.; Hatton, Tyson W.

2012-01-01

Passage and survival data were collected at McNary Dam between 2006 and 2009. These data have provided critical information for resource managers to implement structural and operational changes designed to improve the survival of juvenile salmonids as they migrate past the dam. Much of the valuable information collected at McNary Dam was in the form of three-dimensional (hereafter referred to as 3-D) tracks of fish movements in the forebay. These data depicted the behavior of multiple species (in three dimensions) during different diel periods, spill conditions, powerhouse operations, and testing of the surface bypass structures (temporary spillway weirs; TSWs). One of the challenges in reporting 3-D results is presenting the information in a manner that allows interested parties to summarize the behavior of many fish over many different conditions across multiple years. To accomplish this, we used a Markov chain analysis to characterize fish movement patterns in the forebay of McNary Dam. The Markov chain analysis allowed us to numerically summarize the behavior of fish in the forebay. This report is the second report published in 2012 that uses this analytical method. The first report included only fish released as part of the annual studies conducted at McNary Dam. This second report includes sockeye salmon that were released as part of studies conducted by the Chelan and Grant County Public Utility Districts at mid-Columbia River dams. The studies conducted in the mid-Columbia used the same transmitters as were used for McNary Dam studies, but transmitter pulse width was different between studies. Additionally, no passive integrated transponder tags were implanted in sockeye salmon. Differences in transmitter pulse width resulted in lower detection probabilities for sockeye salmon at McNary Dam. The absence of passive integrated transponder tags prevented us from determining if fish passed the powerhouse through the juvenile bypass system (JBS) or turbines. To facilitate comparison among species in this report, we combined JBS and turbine passage for yearling Chinook salmon, steelhead, and subyearling Chinook salmon even though we were able to differentiate between passage through the JBS or turbines for these three species. Information on passage proportions through the JBS and turbines can be found in the first report. Numerically summarizing the behavior of juvenile salmonids in the forebay of McNary Dam using the Markov chain analysis allowed us to confirm what had been previously summarized using visualization software. For example, within the powerhouse region, passage proportions among the three powerhouse areas were often greater in the southern and middle areas of the powerhouse compared to the northern area of the powerhouse for yearling and subyearling Chinook salmon. The opposite generally was observed for steelhead. The results of this analysis also allowed us to confirm and quantify the extent of milling behavior that was observed for steelhead. For fish that were first detected in the powerhouse region, less than 0.10 of the steelhead, on average, passed within each of the powerhouse areas. Instead, steelhead transitioned to adjoining areas in the spillway before passing the dam. In comparison, greater than 0.20 of the Chinook salmon passed within each of the powerhouse areas. Less milling behavior was observed for all species for fish that first approached the spillway. Compared to the powerhouse areas, a higher proportion of fish, regardless of species, passed the spillway areas and fewer transitioned to adjoining areas in the powerhouse. In addition to quantifying what had been previously speculated about the behavior of fish in the forebay of McNary Dam, the Markov chain analysis refined our understanding of how fish behavior and passage can be influenced by changes to the operations and structure of McNary Dam. For example, the addition of TSWs to the spillway area clearly influenced the passage of fish. Previous results have been reported showing that TSWs increased passage through non-turbine routes and the fish-track videos indicated, in general, how fish behaved before passing the TSWs. However, the analysis presented in this report allowed us to better understand how fish transitioned across the face of the dam before passing the TSWs and resulted in a quantitative way to measure the effect of moving the location of the TSWs from year to year. Installation of the TSWs in bays 22 and 20 clearly increased passage proportions through the southern one-third of the spillway area for all species, most significantly for steelhead. When the TSWs were moved to bays 19 and 20 in 2008, overall passage through the southern one-third of the spillway remained higher than 2006, but decreased from what was observed in 2007. Shifting the TSWs to the north decreased the proportion of fish passing through the TSWs and increased the number of fish that transitioned to adjoining areas before passing the dam. Perhaps the most interesting new information to come out of the two-step Markov chain analysis relates to how the performance of the TSWs was influenced by their proximity to the powerhouse. During 2007, the highest proportion of fish passing through TSW 22 was for fish that transitioned from the powerhouse area. In contrast, a relatively low proportion of fish passed through TSW 20 after coming from the powerhouse area. Instead, the proportion of fish that passed TSW 20 after coming from the northern part of the spillway was twice as high as the proportion of fish that passed through TSW 20 after coming from the powerhouse. During 2008, the TSW in bay 22 was moved to bay 19, leaving the TSW in bay 20 as the one closest to the powerhouse. As was the case when a TSW was located in bay 22, the proportion of fish passing through TSW 20 after coming from the powerhouse was higher than the proportion of fish passing TSW 20 after coming from the northern part of the spillway. Passage proportions for fish passing through TSW 19, the farthest north of the two TSWs during 2008, was higher for fish that came from the northern part of the spillway compared to the proportion of fish that passed through TSW 19 after coming from the powerhouse. The Markov chain analysis provided a mathematical way to characterize fish behavior in the forebay of McNary Dam and helped refine our understanding of how fish movements were influenced by operational and structural changes at the dam. The numerical information used to quantify the behavior of fish also can be used to construct simulations to examine how proposed fish passage structures might influence passage of juvenile salmonids. To demonstrate this, we used the results of the Markov chain analysis to examine how a virtual fish collector located in the center of the powerhouse might influence passage of juvenile salmonids at McNary Dam.

Relation between Streamflow of Swiftcurrent Creek, Montana, and the Geometry of Passage for Bull Trout (Salvelinus confluentus)

USGS Publications Warehouse

Auble, Gregor T.; Holmquist-Johnson, Christopher L.; Mogen, Jim T.; Kaeding, Lynn R.; Bowen, Zachary H.

2009-01-01

Operation of Sherburne Dam in northcentral Montana has typically reduced winter streamflow in Swiftcurrent Creek downstream of the dam and resulted in passage limitations for bull trout (Salvelinus confluentus). We defined an empirical relation between discharge in Swiftcurrent Creek between Sherburne Dam and the downstream confluence with Boulder Creek and fish passage geometry by considering how the cross-sectional area of water changed as a function of discharge at a set of cross sections likely to limit fish passage. With a minimum passage window of 15 x 45 cm, passage at the cross sections increased strongly with discharge over the range of 1.2 to 24 cfs. Most cross sections did not satisfy the minimum criteria at 1.2 cfs, 25 percent had no passage at 12.7 cfs, whereas at 24 cfs all but one of 26 cross sections had some passage and 90 percent had more than 3 m of width satisfying the minimum criteria. Sensitivity analysis suggests that the overall results are not highly dependent on exact dimensions of the minimum passage window. Combining these results with estimates of natural streamflow in the study reach further suggests that natural streamflow provided adequate passage at some times in most months and locations in the study reach, although not for all individual days and locations. Limitations of our analysis include assumptions about minimum passage geometry, measurement error, limitations of the cross-sectional model we used to characterize passage, the relation of Sherburne Dam releases to streamflow in the downstream study reach in the presence of ephemeral accretions, and the relation of passage geometry as we have measured it to fish responses of movement, stranding, and mortality, especially in the presence of ice cover.

Comparative physiology and relative swimming performance of three redhorse (Moxostoma spp.) species: associations with fishway passage success.

PubMed

Hatry, Charles; Thiem, Jason D; Binder, Thomas R; Hatin, Daniel; Dumont, Pierre; Stamplecoskie, Keith M; Molina, Juan M; Smokorowski, Karen E; Cooke, Steven J

2014-01-01

Our understanding of biological criteria to inform fish passage design is limited, partially due to the lack of understanding of biological motivators, cues, and constraints, as well as a lack of biological performance evaluations of structures once they are built. The Vianney-Legendre vertical slot fishway on the Richelieu River, Quebec, Canada, passes large numbers of migrating redhorse (Moxostoma spp.) upriver to spawning grounds each year. We evaluated the physiological capacity and relative swimming ability of three redhorse species (Moxostoma anisurum, Moxostoma carinatum, Moxostoma macrolepidotum; silver, river, and shorthead redhorse, respectively) to determine how these biotic factors relate to variation in fishway passage success and duration. Shorthead redhorse had higher maximum metabolic rates and were faster swimmers than silver and river redhorse at their species-specific peak migration temperatures. Blood lactate and glucose concentrations recovered more quickly for river redhorse than for silver and shorthead redhorse, and river redhorse placed second in terms of metabolic recovery and swim speed. Interestingly, fish sampled from the top of the fishway had nearly identical lactate, glucose, and pH values compared to control fish. Using passive integrated transponders in 2010 and 2012, we observed that passage success and duration were highly variable among redhorse species and were not consistent among years, suggesting that other factors such as water temperature and river flows may modulate passage success. Clearly, additional research is needed to understand how organismal performance, environmental conditions, and other factors (including abundance of conspecifics and other comigrants) interact with fishway features to dictate which fish will be successful and to inform research of future fishways. Our research suggests that there may be an opportunity for a rapid assessment approach where fish chased to exhaustion to determine maximal values of physiological disturbance are compared to fish sampled from the top of the fishway, which could reveal which species (or sizes of fish) are approaching or exceeding their physiological capacity during passage.

A comparison of metrics to evaluate the effects of hydro-facility passage stressors on fish

DOE Office of Scientific and Technical Information (OSTI.GOV)

Colotelo, Alison H.; Goldman, Amy E.; Wagner, Katie A.

Hydropower is the most common form of renewable energy, and countries worldwide are considering expanding hydropower to new areas. One of the challenges of hydropower deployment is mitigation of the environmental impacts including water quality, habitat alterations, and ecosystem connectivity. For fish species that inhabit river systems with hydropower facilities, passage through the facility to access spawning and rearing habitats can be particularly challenging. Fish moving downstream through a hydro-facility can be exposed to a number of stressors (e.g., rapid decompression, shear forces, blade strike and collision, and turbulence), which can all affect fish survival in direct and indirect ways.more » Many studies have investigated the effects of hydro-turbine passage on fish; however, the comparability among studies is limited by variation in the metrics and biological endpoints used. Future studies investigating the effects of hydro-turbine passage should focus on using metrics and endpoints that are easily comparable. This review summarizes four categories of metrics that are used in fisheries research and have application to hydro-turbine passage (i.e., mortality, injury, molecular metrics, behavior) and evaluates them based on several criteria (i.e., resources needed, invasiveness, comparability among stressors and species, and diagnostic properties). Additionally, these comparisons are put into context of study setting (i.e., laboratory vs. field). Overall, injury and molecular metrics are ideal for studies in which there is a need to understand the mechanisms of effect, whereas behavior and mortality metrics provide information on the whole body response of the fish. The study setting strongly influences the comparability among studies. In laboratory-based studies, stressors can be controlled by both type and magnitude, allowing for easy comparisons among studies. In contrast, field studies expose fish to realistic passage environments but the comparability is limited. Based on these results, future studies, whether lab or field-based, should focus on metrics that relate to mortality for ease of comparison.« less

Effects of a Novel Fish Transport System on the Health of Adult Fall Chinook Salmon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Geist, David R.; Colotelo, Alison H.; Linley, Timothy J.

Movement past hydroelectric dams and related in-river structures has important implications for habitat connectivity and population persistence in migratory fish. A major problem is that many of these structures lack effective fish passage facilities, which can fragment spawning and rearing areas and negatively impact recruitment. While traditional fish passage facilities (e.g., ladders, trap and haul) can effectively enable fish to pass over barriers, their capital or operational costs can be significant. We evaluated the utility of a novel transport device that utilizes a flexible tube with differential internal air pressure to pass fish around in-river barriers. Three treatments and amore » control group were tested. In two of the treatments, adult fall Chinook Salmon nearing maturation were transported through the device via two lengths of tube (12 or 77 m) and their injury, stress, and immune system responses and reproductive function were compared to a third treatment where fish were moved by a standard trap and haul method and also to a control group. We observed no significant differences among the treatment or control groups in post-treatment adult survival, injury or stress. Indicators of immune system response and reproductive readiness were also not significantly different among the four groups. Egg survival was significantly different among the groups, but the differences were highly variable within groups and not consistent with the duration of treatment or degree of handling. Taken together, the results suggest the device did not injure or alter normal physiological functioning of adult fall Chinook Salmon nearing maturation and may provide an effective method for transporting such fish around in-river barriers during their spawning migration. Keywords: Whooshh, transport, in-stream barriers, hydropower« less

A multi-year analysis of passage and survival at McNary Dam, 2004-09

USGS Publications Warehouse

Adams, Noah S.; Walker, C.E.; Perry, R.W.

2011-01-01

We analyzed 6 years (2004–09) of passage and survival data collected at McNary Dam to determine how dam operations and environmental conditions affect passage and survival of juvenile salmonids. A multinomial logistic regression was used to examine how environmental variables and dam operations relate to passage behavior of juvenile salmonids at McNary Dam. We used the Cormack-Jolly-Seber release-recapture model to determine how the survival of juvenile salmonids passing through McNary Dam relates to environmental variables and dam operations. Total project discharge and the proportion of flow passing the spillway typically had a positive effect on survival for all species and routes. As the proportion of water through the spillway increased, the number of fish passing the spillway increased, as did overall survival. Additionally, survival generally was higher at night. There was no meaningful difference in survival for fish that passed through the north or south portions of the spillway or powerhouse. Similarly, there was no difference in survival for fish released in the north, middle, or south portions of the tailrace. For subyearling Chinook salmon migrating during the summer season, increased temperatures had a drastic effect on passage and survival. As temperature increased, survival of subyearling Chinook salmon decreased through all passage routes and the number of fish that passed through the turbines increased. During years when the temporary spillway weirs (TSWs) were installed, passage through the spillway increased for spring migrants. However, due to the changes made in the location of the TSW between years and the potential effect of other confounding environmental conditions, it is not certain if the increase in spillway passage was due solely to the presence of the TSWs. The TSWs appeared to improve forebay survival during years when they were operated.

Passage survival of juvenile steelhead, coho salmon, and Chinook salmon in Lake Scanewa and at Cowlitz Falls Dam, Cowlitz River, Washington, 2010–16

USGS Publications Warehouse

Liedtke, Theresa L.; Kock, Tobias J.; Hurst, William

2018-04-03

A multi-year evaluation was conducted during 2010–16 to evaluate passage survival of juvenile steelhead (Oncorhynchus mykiss), Chinook salmon (O. tshawytscha), and coho salmon (O. kisutch) in Lake Scanewa, and at Cowlitz Falls Dam in the upper Cowlitz River Basin, Washington. Reservoir passage survival was evaluated in 2010, 2011, and 2016, and included the tagging and release of 1,127 juvenile salmonids. Tagged fish were released directly into the Cowlitz and Cispus Rivers, 22.3 and 8.9 km, respectively, upstream of the reservoir, and were monitored as they moved downstream into, and through the reservoir. A single release-recapture survival model was used to analyze detection records and estimate reservoir passage survival, which was defined as successful passage from reservoir entry to arrival at Cowlitz Falls Dam. Tagged fish generally moved quickly downstream of the release sites and, on average, arrived in the dam forebay within 2 d of release. Median travel time from release to first detection at the dam ranged from 0.23 to 0.96 d for juvenile steelhead, from 0.15 to 1.11 d for juvenile coho salmon, and from 0.18 to 1.89 d for juvenile Chinook salmon. Minimum reservoir passage survival probabilities were 0.960 for steelhead, 0.855 for coho salmon and 0.900 for Chinook salmon.Dam passage survival was evaluated at the pilot-study level during 2013–16 and included the tagging and release of 2,512 juvenile salmonids. Juvenile Chinook salmon were evaluated during 2013–14, and juvenile steelhead and coho salmon were evaluated during 2015–16. A paired-release study design was used that included release sites located upstream and downstream of Cowlitz Falls Dam. The downstream release site was positioned at the downstream margin of the dam’s tailrace, which allowed dam passage survival to be measured in a manner that included mortality that occurred in the passage route and in the dam tailrace. More than one-half of the tagged Chinook salmon (52 percent) released upstream of Cowlitz Falls Dam moved downstream and passed the project; the remaining fish either remained upstream of the dam (37 percent) or were collected (11 percent). In 2015 and 2016, collection efficiencies at Cowlitz Falls Dam were abnormally high for juvenile steelhead and coho salmon, which resulted in few fish passing the dam. Seven percent of the tagged steelhead (40 fish) and 4 percent of the tagged coho salmon (18 fish) released upstream of the dam eventually passed the project, but these low numbers of fish precluded the estimation of meaningful survival estimates. Dam passage survival probability estimates for juvenile Chinook salmon were 0.828 in 2013 and 0.861 in 2014, lower than previously reported for turbine-specific passage Cowlitz Falls Dam.

Compliance Monitoring of Subyearling Chinook Salmon Survival and Passage at The Dalles Dam, Summer 2012

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam

2013-05-01

The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon at The Dalles Dam during summer 2012. Under the 2008 Federal Columbia River Power System Biological Opinion, dam passage survival is required to be greater than or equal to 0.93 and estimated with a standard error (SE) less than or equal to 0.015. The study also estimated survival from the forebay 2 km upstream of the dam and through the tailrace to 2 km downstream of the dam, forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), asmore » required by the 2008 Columbia Basin Fish Accords.« less

Effect of electric barrier on passage and physical condition of juvenile and adult rainbow trout

USGS Publications Warehouse

Layhee, Megan J.; Sepulveda, Adam; Shaw, Amy; Smuckall, Matthew; Kapperman, Kevin; Reyes, Alejandro

2016-01-01

Electric barriers can inhibit passage and injure fish. Few data exist on electric barrier parameters that minimize these impacts and on how body size affects susceptibility, especially to nontarget fish species. The goal of this study was to determine electric barrier voltage and pulse-width settings that inhibit passage of larger bodied rainbow trout Oncorhynchus mykiss (215–410 mm fork length) while allowing passage of smaller bodied juvenile rainbow trout (52–126 mm) in a static laboratory setting. We exposed rainbow trout to 30-Hz pulsed-direct current voltage gradients (0.00–0.45 V cm−1) and pulse widths (0.0–0.7 ms) and recorded their movement, injury incidence, and mortality. No settings tested allowed all juveniles to pass while impeding all adult passage. Juvenile and adult rainbow trout avoided the barrier at higher pulse widths, and fewer rainbow trout passed the barrier at 0.7-ms pulse width compared to 0.1 ms and when the barrier was turned off. We found no effect of voltage gradient on fish passage. No mortality occurred, and we observed external bruising in 5 (7%) juvenile rainbow trout and 15 (21%) adult rainbow trout. This study may aid managers in selecting barrier settings that allow for increased juvenile passage.

Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1991 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hawkes, Lynette A.; Martinson, Rick D.; Smith, W. William

1992-04-01

The 1991 smolt monitoring project of the National Marine Fisheries Service provided data on the seaward migration of juvenile salmon and steelhead at John Day, The Dalles and Bonneville Dams. All pertinent fish capture and condition data as well as dam operations and river flow data were provided to Fish Passage Center for use in developing fish passage indices and migration timing, and for water budget and spill management.

Survival and passage of ingested New Zealand mudsnails through the intestinal tract of rainbow trout

USGS Publications Warehouse

Bruce, R. Louise; Moffitt, Christine M.; Dennis, Brian

2009-01-01

We conducted laboratory trials to determine the transit time and survival of New Zealand mudsnails Potamopyrgus antipodarum in the gastrointestinal tract of rainbow trout Oncorhynchus mykiss. To assess the rate of snail passage, we force-fed groups of fish a known quantity of snails and then held them in tanks. At selected intervals we removed individual fish from the test tanks and recorded the number of snails, their condition (live or dead), and their location in the gastrointestinal tract (stomach, anterior intestine, and posterior intestine). Feces were removed from tanks and examined for live snails. We repeated evaluations of passage rate and snail survival to determine the effects of varying the number of snails ingested, fish size, snail size, and feeding a commercial diet to fish after snail ingestion. We plotted and modeled gut evacuation using a stochastic model for ordinal data to consider each test variable. Snail passage rates were faster in fish that were fed smaller snails. Surprisingly, fish fed snails and then administered rations of commercial fish feed retained the snails longer in their stomach than did fish that were not administered fish feeds after being fed snails. Increased retention time of snails in the stomach decreased the probability of snail survival when voided in fecal material. Snails that passed through the gastrointestinal tract within 12–24 h of ingestion were often recovered live in fecal samples. However, no live snails were recovered from the posterior intestine or fecal material collected 24 h after ingestion. Using our results we propose potential management options that could reduce the risks of introducing live snails into new locations when stocking fish from infested hatcheries.

Physiological responses of adult rainbow trout experimentally released through a unique fish conveyance device

USGS Publications Warehouse

Mesa, Matthew G.; Gee, Lisa P.; Weiland, Lisa K.; Christiansen, Helena E.

2013-01-01

We assessed the physiological stress responses (i.e., plasma levels of cortisol, glucose, and lactate) of adult Rainbow Trout Oncorhynchus mykiss at selected time intervals after they had passed a distance of 15 m through a unique fish conveyance device (treatment fish) or not (controls). This device differs from traditional fish pumps in two important ways: (1) it transports objects in air, rather than pumping them from and with water; and (2) it uses a unique tube for transport that has a series of soft, deformable baffles spaced evenly apart and situated perpendicular within a rigid, but flexible outer shell. Mean concentrations of the plasma constituents never differed (P > 0.05) between control and treatment fish at 0, 1, 4, 8, or 24 h after passage, and only minor differences were apparent between the different time intervals within a group. We observed no obvious injuries on any of our fish. Our results indicate that passage through this device did not severely stress or injure fish and it may allow for the rapid and safe movement of fish at hatcheries, sorting or handling facilities, or passage obstacles.

Modeling the effect of varying swim speeds on fish passage through velocity barriers

USGS Publications Warehouse

Castro-Santos, T.

2006-01-01

The distance fish can swim through zones of high-velocity flow is an important factor limiting the distribution and conservation of riverine and diadromous fishes. Often, these barriers are characterized by nonuniform flow conditions, and it is likely that fish will swim at varying speeds to traverse them. Existing models used to predict passage success, however, typically include the unrealistic assumption that fish swim at a constant speed regardless of the speed of flow. This paper demonstrates how the maximum distance of ascent through velocity barriers can be estimated from the swim speed-fatigue time relationship, allowing for variation in both swim speed and water velocity.

Walla Walla River Fish Passage Operations Program, 2003-2004 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bronson, James P.

2004-12-01

In the late 1990s, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate fish migration conditions in the basin. The migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow requirements, and providing trap and haul efforts when needed. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survivalmore » of migrating adult and juvenile salmonids in the Walla Walla River basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage criteria and passage and trapping facility design and operation. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. During the 2003-2004 project year, there were 379 adult summer steelhead (Oncorhynchus mykiss), 36 adult bull trout (Salvelinus confluentus); 108 adult and 3 jack spring chinook (O. tshawytscha) enumerated at the Nursery Bridge Dam fishway video counting window between December 21, 2003, and June 30, 2004. Summer steelhead and spring chinook were observed moving upstream while bull trout were observed moving both upstream and downstream of the facility. In addition, the old ladder trap was operated by the WWBNPME project in order to radio tag spring chinook adults. A total of 2 adult summer steelhead, 4 bull trout, and 23 adult spring chinook were enumerated at the west ladder at Nursery Bridge Dam during the trapping operations between May 6 and May 23, 2004. Operation of the Little Walla Walla River juvenile trap for trap and haul purposes was not necessary this year. The project transported adult spring chinook from Threemile Dam to the South Fork Walla Walla Brood Holding Facility. A total of 239 spring chinook were outplanted in August for natural spawning in the basin.« less

Lower Granite Dam Smolt Monitoring Program, 1998 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Verhey, Peter; Ross, Doug; Morrill, Charles

1998-12-01

The 1998 fish collection season at Lower Granite was characterized by relatively moderate spring flows and spill, moderate levels of debris, cool spring, warm summer and fall water temperatures, and increased chinook numbers, particularly wild subyearling chinook collected and transported. The Fish Passage Center's Smolt Monitoring Program is designed to provide a consistent, real-time database on fish passage and document the migrational characteristics of the many stocks of salmon and steelhead in the Columbia Basin.

Downstream migration and multiple dam passage by Atlantic Salmon smolts

USGS Publications Warehouse

Nyqvist, D.; McCormick, Stephen; Greenberg, L.; Ardren, W.R.; Bergman, E.; Calles, O.; Castro-Santos, Theodore R.

2017-01-01

The purpose of this study was to investigate behavior and survival of radio-tagged wild and hatchery-reared landlocked Atlantic Salmon Salmo salar smolts as they migrated past three hydropower dams equipped with fish bypass solutions in the Winooski River, Vermont. Among hatchery-reared smolts, those released early were more likely to initiate migration and did so after less delay than those released late. Once migration was initiated, however, the late-released hatchery smolts migrated at greater speeds. Throughout the river system, hatchery-reared fish performed similarly to wild fish. Dam passage rates varied between the three dams and was highest at the dam where unusually high spill levels occurred throughout the study period. Of the 50 fish that did migrate downstream, only 10% managed to reach the lake. Migration success was low despite the presence of bypass solutions, underscoring the need for evaluations of remedial measures; simply constructing a fishway is not synonymous with providing fish passage.

Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1992 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hawkes, Lynnette A.; Martinson, Rick D.; Absolon, Randall F.

1993-05-01

The seaward migration of salmonid smolts was monitored by the National marine Fisheries Service (NMFS) at two sites on the Columbia River in 1992. The NMFS Smolt Monitoring Project is part of a larger Smolt Monitoring Program to index Columbia Basin juvenile salmonied stocks. It is coordinated by the Fish Passage Center (FPC) for the Columbia Basin Fish and Wildlife Agencies and Tribes. Its purpose is to facilitate fish passage through reservoirs and at dams by providing FPC with timely smolt migration data used for flow and spill management. Data is also used for travel time, migration timing and relativemore » run size magnitude analysis. This program is carried out under the auspices of the Northwest Power Planning Council Fish and Wildlife Program and is funded by the Bonneville Power Administration (BPA). Sampling sites were John Day and Bonneville Dams under the 1992 Smolt Monitoring Program. All pertinent fish capture, condition, brand recovery, and flow data, were reported daily to FPC. These data were incorporated into the FPC`s Fish Passage Data System (FPDS).« less

A fish-eye view of riverine hydropower systems. Understanding the biological response to turbine passage

DOE PAGES

Pracheil, Brenda M.; DeRolph, Christopher R.; Schramm, Michael P.; ...

2016-01-01

One-way connectivity maintained by fish passing through hydropower turbines in fragmented rivers can be important to population dynamics, but can introduce a new and significant source of mortality due to turbine-associated mortality. Sources of mortality during downstream turbine passage can come from several sources including blade strike, shear forces, cavitation, or pressure decreases, and parsing the contributions of these individual forces is important for advancing and deploying turbines that minimize these impacts to fishes. We used a national hydropower database and conducted a systematic review of the literature to accomplish three goals: (1) report on the spatial distribution of turbinemore » types and generation capacities in the USA, (2) determine fish mortality rates among turbine types and fish species and (3) examine relationships between physical forces similar to those encountered during fish turbine passage and fish injury and mortality. We found that while Francis turbines generate 56% of all US hydropower and have the highest associated fish mortality of any turbine type, these turbines are proportionally understudied compared to less-common and less injury-associated Kaplan turbines, particularly in the Pacific Northwest. While juvenile salmonid species in actual or simulated Kaplan turbine conditions were the most commonly studied, the highest mortality rates were reported in percid fishes passing through Francis turbines. Also, although there are several mechanisms of turbine-associated injury, barotrauma was the most commonly studied with swim bladder rupture, exopthalmia, eye gas bubbles, and prolapsed cloaca being the most serious symptoms associated with rapid pressure decreases. Future studies should focus on understanding which species are most at-risk to turbine passage mortality and, subsequently, increasing the diversity of taxonomy and turbine types in evaluations of turbine mortality.« less

Sensor Fish: an autonomous sensor package for characterizing complex flow fields and fish passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Martinez, Jayson J.; Lu, Jun

Fish passing through dams or other hydraulic structures may be injured or killed despite advances in turbine design, project operations, and other fish bypass systems. The Sensor Fish (SF) device is an autonomous sensor package that characterizes the physical conditions and stressors to which fish are exposed during passage through hydro facilities. It was designed to move passively as a neutrally buoyant object through severe hydraulic environments, while collecting high-resolution sensor data. Since its first generation1, the SF device has been successfully deployed in many fish passage studies and has evolved to be a major tool for characterizing fish passagemore » conditions during fish passage in the Columbia River Basin. To better accelerate hydropower development, the U.S. Department of Energy Water Power Program provided funding to develop a new generation (Gen 2 SF) to incorporate more capabilities and accommodate a wider range of users over a broader range of turbine designs and operating environments. The Gen 2 SF (Figure 1) is approximately the size and density of a yearling salmon smolt and is nearly neutrally buoyant. It contains three-dimensional (3D) rotation sensors, 3D linear acceleration sensors, a pressure sensor, a temperature sensor, a 3D orientation sensor, a radiofrequency (RF) transmitter, and a recovery module2. A low-power microcontroller collects data from the sensors and stores up to 5 min of data on internal flash memory at a sampling frequency of 2048 Hz. The recovery module makes the SF positively buoyant after a pre-programmed period of time, causing it to float to the surface for recovery.« less

A fish-eye view of riverine hydropower systems. Understanding the biological response to turbine passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pracheil, Brenda M.; DeRolph, Christopher R.; Schramm, Michael P.

One-way connectivity maintained by fish passing through hydropower turbines in fragmented rivers can be important to population dynamics, but can introduce a new and significant source of mortality due to turbine-associated mortality. Sources of mortality during downstream turbine passage can come from several sources including blade strike, shear forces, cavitation, or pressure decreases, and parsing the contributions of these individual forces is important for advancing and deploying turbines that minimize these impacts to fishes. We used a national hydropower database and conducted a systematic review of the literature to accomplish three goals: (1) report on the spatial distribution of turbinemore » types and generation capacities in the USA, (2) determine fish mortality rates among turbine types and fish species and (3) examine relationships between physical forces similar to those encountered during fish turbine passage and fish injury and mortality. We found that while Francis turbines generate 56% of all US hydropower and have the highest associated fish mortality of any turbine type, these turbines are proportionally understudied compared to less-common and less injury-associated Kaplan turbines, particularly in the Pacific Northwest. While juvenile salmonid species in actual or simulated Kaplan turbine conditions were the most commonly studied, the highest mortality rates were reported in percid fishes passing through Francis turbines. Also, although there are several mechanisms of turbine-associated injury, barotrauma was the most commonly studied with swim bladder rupture, exopthalmia, eye gas bubbles, and prolapsed cloaca being the most serious symptoms associated with rapid pressure decreases. Future studies should focus on understanding which species are most at-risk to turbine passage mortality and, subsequently, increasing the diversity of taxonomy and turbine types in evaluations of turbine mortality.« less

Enumeration of Salmonids in the Okanogan Basin Using Underwater Video, Performance Period: October 2005 (Project Inception) - 31 December 2006.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Peter N.; Rayton, Michael D.; Nass, Bryan L.

2007-06-01

The Confederated Tribes of the Colville Reservation (Colville Tribes) identified the need for collecting baseline census data on the timing and abundance of adult salmonids in the Okanogan River Basin in order to determine basin and tributary-specific spawner distributions, evaluate the status and trends of natural salmonid production in the basin, document local fish populations, and augment existing fishery data. This report documents the design, installation, operation and evaluation of mainstem and tributary video systems in the Okanogan River Basin. The species-specific data collected by these fish enumeration systems are presented along with an evaluation of the operation of amore » facility that provides a count of fish using an automated method. Information collected by the Colville Tribes Fish & Wildlife Department, specifically the Okanogan Basin Monitoring and Evaluation Program (OBMEP), is intended to provide a relative abundance indicator for anadromous fish runs migrating past Zosel Dam and is not intended as an absolute census count. Okanogan Basin Monitoring and Evaluation Program collected fish passage data between October 2005 and December 2006. Video counting stations were deployed and data were collected at two locations in the basin: on the mainstem Okanogan River at Zosel Dam near Oroville, Washington, and on Bonaparte Creek, a tributary to the Okanogan River, in the town of Tonasket, Washington. Counts at Zosel Dam between 10 October 2005 and 28 February 2006 are considered partial, pilot year data as they were obtained from the operation of a single video array on the west bank fishway, and covered only a portion of the steelhead migration. A complete description of the apparatus and methodology can be found in 'Fish Enumeration Using Underwater Video Imagery - Operational Protocol' (Nass 2007). At Zosel Dam, totals of 57 and 481 adult Chinook salmon were observed with the video monitoring system in 2005 and 2006, respectively. Run timing for Chinook in 2006 indicated that peak passage occurred in early October and daily peak passage was noted on 5 October when 52 fish passed the dam. Hourly passage estimates of Chinook salmon counts for 2005 and 2006 at Zosel Dam revealed a slight diel pattern as Chinook passage events tended to remain low from 1900 hours to 0600 hours relative to other hours of the day. Chinook salmon showed a slight preference for passing the dam through the video chutes on the east bank (52%) relative to the west bank (48%). A total of 48 adult sockeye salmon in 2005 and 19,245 in 2006 were counted passing through the video chutes at Zosel Dam. The 2006 run timing pattern was characterized by a large peak in passage from 3 August through 10 August when 17,698 fish (92% of total run observed for the year) were observed passing through the video chutes. The daily peak of 5,853 fish occurred on 4 August. Hourly passage estimates of sockeye salmon counts for 2005 and 2006 at the dam showed a strong diel pattern with increased passage during nighttime hours relative to daytime hours. Sockeye showed a strong preference for passing Zosel Dam on the east bank (72%) relative to the west bank (28%). A total of 298 adult upstream-migrating steelhead were counted at Zosel Dam in 2005 and 2006, representing the 2006 cohort based on passage data from 5 October 2005 through 15 July 2006. Eighty-seven percent (87%) of the total steelhead observed passed the dam between 23 March and 25 April with a peak passage occurring on 6 April when 31 fish were observed. Steelhead passage at Zosel Dam exhibited no diel pattern. In contrast to both Chinook and sockeye salmon, steelhead were shown to have a preference for passing the dam on the west bank (71%) relative to the east bank (29%). Both Chinook and sockeye passage at Zosel Dam were influenced by Okanogan River water temperature. When water temperatures peaked in late July (daily mean exceeded 24 C and daily maximum exceeded 26.5 C), Chinook and sockeye counts went to zero. A subsequent decrease in water temperature resulted in sharp increases in both Chinook and sockeye passage. A total of six steelhead were observed with the video monitoring system at Bonaparte Creek in 2006, with three passage events occurring on 29 March and one each on 20, 21, and 23 April. This system was operational for only a portion of the migration.« less

Fish Passage Through a Simulated Horizontal Bulb Turbine Pressure Regime: A Supplement to"Laboratory Studies of the Effects of Pressure and Dissolved Gas Supersaturation on Turbine-Passed Fish"

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abernethy, Cary S.; Amidan, Brett G.; Cada, G F.

Migratory and resident fish in the Columbia River Basin are exposed to stresses associated with hydroelectric power production, including pressure changes during turbine passage. The responses of fall chinook salmon and bluegill sunfish to rapid pressure change was investigated at the Pacific Northwest National Laboratory. Previous test series evaluated the effects of passage through a vertical Kaplan turbine under the"worst case" pressure conditions and under less severe conditions where pressure changes were minimized. For this series of tests, pressure changes were modified to simulate passage through a horizontal bulb turbine, commonly installed at low head dams. The results were comparedmore » to results from previous test series. Migratory and resident fish in the Columbia River Basin are exposed to stresses associated with hydroelectric power production, including pressure changes during turbine passage. The responses of fall chinook salmon and bluegill sunfish to rapid pressure change was investigated at the Pacific Northwest National Laboratory. Previous test series evaluated the effects of passage through a vertical Kaplan turbine under the"worst case" pressure conditions and under less severe conditions where pressure changes were minimized. For this series of tests, pressure changes were modified to simulate passage through a horizontal bulb turbine, commonly installed at low head dams. The results were compared to results from previous test series. Both fish species were acclimated for 16-22 hours at either surface (101 kPa; 1 atm) or 30 ft (191 kPa; 1.9 atm) of pressure in a hyperbaric chamber before exposure to a pressure scenario simulating passage through a horizontal bulb turbine. The simulation was as follows: gradual pressure increase to about 2 atm of pressure, followed by a sudden (0.4 second) decrease in pressure to either 0.7 or 0.95 atm, followed by gradual return to 1 atm (surface water pressure). Following the exposure, fish were held at surface pressure for a 48-hour post exposure observation period. No fall chinook salmon died during or after exposure to the horizontal bulb turbine passage pressures, and no injuries were observed during the 48-hour post exposure observation period. As with the previous test series, it cannot be determined whether fall chinook salmon acclimated to the greater water pressure during the pretest holding period. For bluegill sunfish exposed to the horizontal bulb turbine turbine-passage pressures, only one fish died and injuries were less severe and less common than for bluegills subjected to either the"worst case" pressure or modified Kaplan turbine pressure conditions in previous tests. Injury rates for bluegills were higher at 0.7 atm nadir than for the 0.95 atm nadir. However, injuries were limited to minor internal hemorrhaging. Bluegills did not suffer swim bladder rupture in any tested scenarios. Tests indicated that for most of the cross-sectional area of a horizontal bulb turbine, pressure changes occurring during turbine passage are not harmful to fall chinook salmon and only minimally harmful to bluegill. However, some areas within a horizontal bulb turbine may have extreme pressure conditions that would be harmful to fish. These scenarios were not tested because they represent a small cross-sectional area of the turbine compared to the centerline pressures scenarios used in these tests.« less

Brook trout passage performance through culverts

USGS Publications Warehouse

Goerig, Elsa; Castro-Santos, Theodore R.; Bergeron, Normand

2016-01-01

Culverts can restrict access to habitat for stream-dwelling fishes. We used passive integrated transponder telemetry to quantify passage performance of >1000 wild brook trout (Salvelinus fontinalis) attempting to pass 13 culverts in Quebec under a range of hydraulic and environmental conditions. Several variables influenced passage success, including complex interactions between physiology and behavior, hydraulics, and structural characteristics. The probability of successful passage was greater through corrugated metal culverts than through smooth ones, particularly among smaller fish. Trout were also more likely to pass at warmer temperatures, but this effect diminished above 15 °C. Passage was impeded at higher flows, through culverts with steep slopes, and those with deep downstream pools. This study provides insight on factors influencing brook trout capacity to pass culverts as well as a model to estimate passage success under various conditions, with an improved resolution and accuracy over existing approaches. It also presents methods that could be used to investigate passage success of other species, with implications for connectivity of the riverscape.

Hungry Horse Dam Fisheries Mitigation : Fish Passage and Habitat Improvement in the Upper Flathead River Basin, 1991-1996 Progress Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Knotek, W.Ladd; Deleray, Mark; Marotz, Brian L.

1997-08-01

In the past 50 years, dramatic changes have occurred in the Flathead Lake and River system. Degradation of fishery resources has been evident, in part due to deterioration of aquatic habitat and introduction of non-endemic fish and invertebrate species. Habitat loss has been attributed to many factors including the construction and operation of Hungry Horse Dam, unsound land use practices, urban development, and other anthropogenic and natural disturbances. Fish migration has also been limited by barriers such as dams and impassible culverts. Cumulatively, these factors have contributed to declines in the distribution and abundance of native fish populations. Recovery ofmore » fish populations requires that a watershed approach be developed that incorporates long-term aquatic habitat needs and promotes sound land use practices and cooperation among natural resource management agencies. In this document, the authors (1) describe completed and ongoing habitat improvement and fish passage activities under the Hungry Horse Fisheries Mitigation Program, (2) describe recently identified projects that are in the planning stage, and (3) develop a framework for identifying prioritizing, implementing, and evaluating future fish habitat improvement and passage projects.« less

Prevention of Prespawning Mortality: Cause of Salmon Headburns and Cranial Lesions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Neitzel, Duane A.; Elston, R A.; Abernethy, Cary S.

2004-06-01

This project was to undertaken to provide information about a condition known as ''headburn''. Information from the project will enable U.S. Corps of Engineers managers to make adjustments in operational procedures or facilities on the Columbia and Snake rivers to prevent loss of pre-spawning adult salmonids that migrate through the facilities. Headburn is a descriptive clinical term used by fishery biologists to describe scalping or exfoliation of skin and ulceration of underlying connective tissue and muscle, primarily of the jaw and cranial region of salmonids observed at fish passage facilities. Headburn lesions are primarily caused when fish collide with concretemore » or other structures at dams and fish passage facilities, and may be exacerbated in some fish that ''fallback'' or pass over spillways or through turbine assemblies after having passed the dam through a fish ladder. Prespawning mortality of headburned salmonids can be prevented or greatly reduced by therapeutic treatment of both hatchery and wild fish. Treatments would consist of topical application of an anti-fungal agent, injection of replacement plasma electrolytes into the peritoneal cavity, and injection of a broad-spectrum antibacterial agent at fish passage and trapping facilities or hatcheries.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ploskey, Gene R.; Weiland, Mark A.; Hughes, James S.

Pacific Northwest National Laboratory (PNNL) and subcontractors conducted an acoustic-telemetry study of juvenile salmonid fish passage and survival at Bonneville Dam in 2010. The study was conducted to assess the readiness of the monitoring system for official compliance studies under the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a single-release model. This also was the last year of evaluation of effects of a behavioral guidance device installed in the Powerhouse 2 forebay. The study relied on releases of live Juvenile Salmon Acoustic Telemetry System taggedmore » smolts in the Columbia River and used acoustic telemetry to evaluate the approach, passage, and survival of passing juvenile salmon. This study supports the U.S. Army Corps of Engineers continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.« less

Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam, 2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weiland, Mark A.; Woodley, Christa M.; Ploskey, Gene R.

This report presents survival, behavioral, and fish passage results for tagged yearling Chinook salmon and juvenile steelhead as part of a survival study conducted at John Day Dam during spring 2011. This study was designed to evaluate the passage and survival of yearling Chinook salmon and juvenile steelhead to assist managers in identifying dam operations for compliance testing as stipulated by the 2008 Federal Columbia River Power System Biological Opinion and the 2008 Columbia Basin Fish Accords. Survival estimates were based on a paired-release survival model.

Effectiveness of a redesigned water diversion using rock vortex weirs to enhance longitudinal connectivity for small Salmonids

USGS Publications Warehouse

Martens, Kyle D.; Connolly, Patrick J.

2010-01-01

For nearly 100 years, water diversions have affected fish passage in Beaver Creek, a tributary of the lower Methow River in north-central Washington State. From 2000 to 2004, four dam-style water diversions were replaced with a series of rock vortex weirs (RVWs). The weirs were designed to allow fish passage while maintaining the ability to divert water into irrigation canals. We observed the new appearance of three species (juvenile Chinook salmon Oncorhynchus tshawytscha, juvenile coho salmon O. kisutch, and mountain whitefish Prosopium williamsoni) upstream of the RVWs, indicating successful restoration of longitudinal connectivity. We used passive integrated transponder (PIT) tags and instream PIT tag interrogation systems during 2004–2007 to evaluate upstream passage of small salmonids (<240 mm fork length) through one series of RVWs. We documented 109 upstream passage events by small salmonids through the series of RVWs; most of the events (81%) involved passage of rainbow trout O. mykiss or juvenile steelhead (anadromous rainbow trout). Small rainbow trout or steelhead ranging from 86 to 238 mm (adjusted fork length) were able to pass upstream through the RVWs, although a delay in fish passage at discharges below 0.32 m3/s was detected in comparison with nearby control sections.

Fish passage and abundance around grade control structures on incised streams

USGS Publications Warehouse

Thomas, J.T.; Papanicolaou, A.N.; Pierce, C.L.; Dermisis, D.C.; Litvan, M.E.; Larson, C.J.

2009-01-01

This paper summarizes research from separate studies of fish passage over weirs (Larson et al., 2004; Litvan, 2006; Litvan, et al., 2008a-c) and weir hydraulics (Papanicolaou and Dermisis, 2006; Papanicolaou and Dermisis, in press). Channel incision in the deep loess region of western Iowa has caused decreased biodiversity because streams have high sediment loads, altered flow regimes, lost habitat, and lost lateral connectivity with their former floodplains. In-stream grade control structures (GCS) are built to prevent further erosion, protect infrastructure, and reduce sediment loads. However, GCS can have a detrimental impact on fisheries abundance and migration, biodiversity, and longitudinal connectivity. Fish mark-recapture studies were performed on stretches of streams with and without GCS. GCS with vertical or 1:4 (rise/run) downstream slopes did not allow fish migration, but GCS with slopes ??? 1:15 did. GCS sites were characterized by greater proportions of pool habitat, maximum depths, fish biomass, slightly higher index of biotic integrity (IBI) scores, and greater macroinvertebrate abundance and diversity than non-GCS sites. After modification of three GCS, IBI scores increased and fish species exhibiting truncated distributions before were found throughout the study area. Another study examined the hydraulic performance of GCS to facilitate unimpeded fish passage by determining the mean and turbulent flow characteristics in the vicinity of the GCS via detailed, non-intrusive field tests. Mean flow depth (Y) and velocity (V) atop the GCS were critical for evaluating GCS performance. Turbulent flow measurements illustrated that certain GCS designs cause sudden constrictions which form eddies large enough to disorient fish. GCS with slopes ??? 1:15 best met the minimum requirements to allow catfish passage of a flow depth of ??? 0.31 m and a mean flow velocity of ??? 1.22 m/s. ?? 2009 ASCE.

Elevated streamflows increase dam passage by juvenile coho salmon during winter: Implications of climate change in the Pacific Northwest

USGS Publications Warehouse

Kock, Tobias J.; Liedtke, Theresa L.; Rondorf, Dennis W.; Serl, John D.; Kohn, Mike; Bumbaco, Karin A.

2012-01-01

A 4-year evaluation was conducted to determine the proportion of juvenile coho salmon Oncorhynchus kisutch passing Cowlitz Falls Dam, on the Cowlitz River, Washington, during winter. River and reservoir populations of coho salmon parr were monitored using radiotelemetry to determine if streamflow increases resulted in increased downstream movement and dam passage. This was of interest because fish that pass downstream of Cowlitz Falls Dam become landlocked in Riffe Lake and are lost to the anadromous population. Higher proportions of reservoir-released fish (0.391-0.480) passed Cowlitz Falls Dam than did river-released fish (0.037-0.119). Event-time analyses demonstrated that streamflow increases were important predictors of dam passage rates during the study. The estimated effect of increasing streamflows on the risk of dam passage varied annually and ranged from 9% to 75% for every 28.3 m3/s increase in streamflow. These results have current management implications because they demonstrate the significance of dam passage by juvenile coho salmon during winter months when juvenile fish collection facilities are typically not operating. The results also have future management implications because climate change predictions suggest that peak streamflow timing for many watersheds in the Pacific Northwest will shift from late spring and early summer to winter. Increased occurrence of intense winter flood events is also expected. Our results demonstrate that juvenile coho salmon respond readily to streamflow increases and initiate downstream movements during winter months, which could result in increased passage at dams during these periods if climate change predictions are realized in the coming decades.

Evaluating upstream passage and timing of approach by adult bigheaded carps at a gated dam on the Illinois River

USGS Publications Warehouse

Lubejko, Matthew; Whitledge, Greg; Coulter, Alison A.; Brey, Marybeth; Oliver, Devon; Garvey, James E.

2017-01-01

Dams are a conservation threat because they function as barriers to native fish movement; however, they may prevent the spread of invasive species. Invasive bigheaded carps (Hypophthalmichthys spp.) threaten the Great Lakes ecosystem and are advancing towards Lake Michigan via the Illinois River. Navigation dams on the Illinois River may deter bigheaded carps' upstream movement. We investigated the permeability of the Starved Rock Lock and Dam (SRLD), the most downstream gated Illinois River dam, to bigheaded carps' migration by examining the timing of individuals approaching and passing through SRLD in relation to gate openness, tailwater elevation, and water temperature. Using acoustic telemetry of (N = ~104 per year) tagged fish, 13 upstream passages of bigheaded carps occurred through SRLD between 2013 and 2016. Eleven passages occurred through the dam gates and 2 through the lock chamber, indicating deterrents (e.g., CO2) placed in SRLD lock chamber may only limit passage of a small proportion of all fish passing through the lock-and-dam structure. Passages were documented only in 2013 and 2015. Most of the dam gate passages occurred during high water when gates were completely out of the water. Timing of bigheaded carps approaching SRLD was positively correlated with rising water temperature and high tailwater elevation, and all fish approached during late March through mid-September. Movement through dams is rare; modifying gate operations to reduce gate openness during late spring and summer could further reduce the permeability of gated dams such as SRLD to bigheaded carps, slowing their upstream advance.

Arctic warming will promote Atlantic-Pacific fish interchange

NASA Astrophysics Data System (ADS)

Wisz, M. S.; Broennimann, O.; Grønkjær, P.; Møller, P. R.; Olsen, S. M.; Swingedouw, D.; Hedeholm, R. B.; Nielsen, E. E.; Guisan, A.; Pellissier, L.

2015-03-01

Throughout much of the Quaternary Period, inhospitable environmental conditions above the Arctic Circle have been a formidable barrier separating most marine organisms in the North Atlantic from those in the North Pacific. Rapid warming has begun to lift this barrier, potentially facilitating the interchange of marine biota between the two seas. Here, we forecast the potential northward progression of 515 fish species following climate change, and report the rate of potential species interchange between the Atlantic and the Pacific via the Northwest Passage and the Northeast Passage. For this, we projected niche-based models under climate change scenarios and simulated the spread of species through the passages when climatic conditions became suitable. Results reveal a complex range of responses during this century, and accelerated interchange after 2050. By 2100 up to 41 species could enter the Pacific and 44 species could enter the Atlantic, via one or both passages. Consistent with historical and recent biodiversity interchanges, this exchange of fish species may trigger changes for biodiversity and food webs in the North Atlantic and North Pacific, with ecological and economic consequences to ecosystems that at present contribute 39% to global marine fish landings.

Reducing the Impacts of Hydroelectric Dams on Juvenile Anadromous Fishes: Bioengineering Evaluations Using Acoustic Imaging in the Columbia River, USA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Ploskey, Gene R.; Hedgepeth, J.

2008-07-29

Dams impact the survival of juvenile anadromous fishes by obstructing migration corridors, lowering water quality, delaying migrations, and entraining fish in turbine discharge. To reduce these impacts, structural and operational modifications to dams— such as voluntary spill discharge, turbine intake guidance screens, and surface flow outlets—are instituted. Over the last six years, we have used acoustic imaging technology to evaluate the effects of these modifications on fish behavior, passage rates, entrainment zones, and fish/flow relationships at hydroelectric projects on the Columbia River. The imaging technique has evolved from studies documenting simple movement patterns to automated tracking of images to mergingmore » and analysis with concurrent hydraulic data. This chapter chronicles this evolution and shows how the information gleaned from the scientific evaluations has been applied to improve passage conditions for juvenile salmonids. We present data from Bonneville and The Dalles dams that document fish behavior and entrainment zones at sluiceway outlets (14 to 142 m3/s), fish passage rates through a gap at a turbine intake screen, and the relationship between fish swimming effort and hydraulic conditions. Dam operators and fisheries managers have applied these data to support decisions on operational and structural changes to the dams for the benefit of anadromous fish populations in the Columbia River basin.« less

Perspective: Towards environmentally acceptable criteria for downstream fish passage through mini hydro and irrigation infrastructure in the Lower Mekong River Basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baumgartner, Lee J.; Daniel Deng, Z.; Thorncraft, Garry

2014-01-01

Tropical rivers have high annual discharges optimal for hydropower and irrigation development. The Mekong River is one of the largest tropical river systems, supporting a unique mega-diverse fish community. Fish are an important commodity in the Mekong, contributing a large proportion of calcium, protein, and essential nutrients to the diet of the local people and providing a critical source of income for rural households. Many of these fish migrate not only upstream and downstream within main-channel habitats but also laterally into highly productive floodplain habitat to both feed and spawn. Most work to date has focused on providing for upstreammore » fish passage, but downstream movement is an equally important process to protect. Expansion of hydropower and irrigation weirs can disrupt downstream migrations and it is important to ensure that passage through regulators or mini hydro systems is not harmful or fatal. Many new infrastructure projects (<6 m head) are proposed for the thousands of tributary streams throughout the Lower Mekong Basin and it is important that designs incorporate the best available science to protect downstream migrants. Recent advances in technology have provided new techniques which could be applied to Mekong fish species to obtain design criteria that can facilitate safe downstream passage. Obtaining and applying this knowledge to new infrastructure projects is essential in order to produce outcomes that are more favorable to local ecosystems and fisheries.« less

Passage probabilities of juvenile Chinook salmon through the powerhouse and regulating outlet at Cougar Dam, Oregon, 2011

USGS Publications Warehouse

Beeman, John W.; Hansen, Amy C.; Evans, Scott D.; Haner, Philip V.; Hansel, Hal C.; Smith, Collin D.

2012-01-01

Cougar Dam near Springfield, Oregon, is one of several federally owned and operated flood-control projects within the Willamette Valley of western Oregon that were determined by the National Oceanic and Atmospheric Administration’s National Marine Fisheries Service in 2008 to impact the long-term viability of several salmonid stocks. In response to this ruling, the U.S. Army Corps of Engineers is looking for means to reduce impacts to salmonids, including improving downstream passage of juvenile salmonids at Cougar Dam. This study of juvenile Chinook salmon (Oncorhynchus tshawytscha) passage at Cougar Dam was conducted to inform decisions about potential improvements for downstream fish passage. The primary objective of the study was to estimate route-specific passage probabilities of yearling Chinook salmon at Cougar Dam. The study was conducted using fish from a nearby hatchery surgically implanted with radio transmitters and passive integrated transponder (PIT) tags and released near the entrance of a temperature control tower through which all water going through the dam must pass. Water passing through the temperature control tower may be routed through a penstock to a powerhouse with two Francis turbines, or to a spillway-like structure called the regulating outlet. Secondary objectives of the study were to estimate the probability that fish enter a bypass at a non-federal facility downstream, and to estimate dam-passage and in-river fish survival. Dam operating conditions during the study included an average forebay elevation of 1,580 feet (National Geodetic Vertical Datum of 1929) and an average of 48.2 percent of the total dam discharge of 1,106 cubic feet per second passing through a regulating outlet opening of 1.25 feet. Dam passage probability was greatest at night (0.8741 standard error [SE] 0.0265) and primarily through the regulating outlet (0.8896 SE 0.0617 day; 0.9417 SE 0.0175 night). The joint probability of entering the bypass at Leaburg Dam and being detected at the PIT system within the bypass was 0.0755 (SE 0.0363), but some fish were known to pass the PIT system undetected, indicating that the true probability of entering the bypass was underestimated. The estimated survival of fish passing through the temperature control tower, through the dam, and to a site at a bridge over the South Fork of the McKenzie River 3.9 kilometers downstream was 0.3680 (SE 0.1322) for fish passing through the powerhouse, and 0.4247 (SE 0.0440) for fish passing through the regulating outlet. The estimated in-river survival through the 37.3 kilometers from the bridge to a site at Leaburg Hatchery on the McKenzie River was 0.5857 (SE 0.2227) for fish that had passed through the powerhouse, and 0.4537 (SE 0.0551) for fish that had passed through the regulating outlet.

Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam 2008-2009

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khan, Fenton; Johnson, Gary E.; Weiland, Mark A.

2009-09-01

This report presents the results of an evaluation of overwintering summer steelhead (Oncorhynchus mykiss) fallback and early out-migrating steelhead kelts downstream passage at The Dalles Dam (TDA) sluiceway and turbines during fall/winter 2008 and early spring 2009, respectively. The study was conducted by the Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers, Portland District (USACE). Operating the sluiceway reduces the potential for hydropower production. However, this surface flow outlet may be the optimal non-turbine route for fallbacks in late fall after the sluiceway is typically closed for juvenile fish passage and for overwintering summer steelhead andmore » kelt passage in the early spring before the start of the voluntary spill season. The goal of this study was to characterize adult steelhead spatial and temporal distributions and passage rates at the sluiceway and turbines, and their movements in front of the sluiceway at TDA to inform fisheries managers’ and engineers’ decision-making relative to sluiceway operations. The study periods were from November 1 to December 15, 2008 (45 days) and from March 1 to April 9, 2009 (40 days). The study objectives were to 1) estimate the number and distribution of overwintering summer steelhead fallbacks and kelt-sized acoustic targets passing into the sluiceway and turbines at TDA during the two study periods, respectively, and 2) assess the behavior of these fish in front of sluice entrances. We obtained fish passage data using fixed-location hydroacoustics and fish behavior data using acoustic imaging. For the overwintering summer steelhead, fallback occurred throughout the 45-day study period. We estimated that a total of 1790 ± 250 (95% confidence interval) summer steelhead targets passed through the powerhouse intakes and operating sluices during November 1 to December 15, 2008. Ninety five percent of these fish passed through the sluiceway. Therefore, without the sluiceway as a route through the dam, a number of steelhead may have fallen back through turbines. Run timing peaked in late November, but fish continued to pass the dam until the end of the study. Horizontal distribution data indicated that sluice 1 is the preferred route for these fish during fallback through the dam. Diel distribution for overwintering steelhead fallbacks was variable with no apparent distinct patterns. Therefore, sluiceway operations should not be based on diel distribution. For the early spring study, overwintering summer steelhead and early out-migrating steelhead kelt downstream passage occurred throughout the 40-day study period. A total of 1766 ± 277 (95% confidence interval) kelt-size targets were estimated to have passed through the powerhouse intakes and operating sluices. Ninety five percent of these fish passed through the sluiceway. Therefore, as with steelhead fallback, not having the sluiceway as a route through the dam, a number of overwintering steelhead and kelts may use the turbines for downstream passage before the start of the spill season. Run timing peaked in late March; however, relatively large numbers of kelt-sized targets passed the dam on March 2 and March 6 (162 and 188 fish, respectively). Horizontal distribution indicated that sluice 1 is the preferred route for these adult salmonids as they migrate downstream through the dam. Again, no clear pattern was seen for diel distribution of overwintering steelhead and early out-migrating kelt passage.« less

Status of downstream fish passage at hydroelectric projects in the northeast, USA

USGS Publications Warehouse

Odeh, Mufeed; Orvis, Curtis

1997-01-01

In the northeastern United States several guidance, protection, and conveyance methods have been employed to assist downstream migrating fish. Overlay racks, standard bar racks with close spacing, louvers, curtain walls, guide walls, netting, and other means have been used to guide and protect fish from entrainment. The design process of these facilities comprises consideration of various factors, including flow approach, attraction flow, guidance and protection devices, bypass location, conveyance mechanism, and plunge pool conditions. This paper presents the status of the design criteria for downstream fish passage facilities at hydroelectric sites in the northeast part of the United States. Examples of existing facilities are given.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jager, Yetta; Forsythe, Patrick S.; McLaughlin, Robert L.

The majority of large North American rivers are fragmented by dams that interrupt migrations of wide-ranging fishes like sturgeons. Reconnecting habitat is viewed as an important means of protecting sturgeon species in U.S. rivers because these species have lost between 5% and 60% of their historical ranges. Unfortunately, facilities designed to pass other fishes have rarely worked well for sturgeons. The most successful passage facilities were sized appropriately for sturgeons and accommodated bottom-oriented species. For upstream passage, facilities with large entrances, full-depth guidance systems, large lifts, or wide fishways without obstructions or tight turns worked well. However, facilitating upstream migrationmore » is only half the battle. Broader recovery for linked sturgeon populations requires safe round-trip passage involving multiple dams. The most successful downstream passage facilities included nature-like fishways, large canal bypasses, and bottom-draw sluice gates. We outline an adaptive approach to implementing passage that begins with temporary programs and structures and monitors success both at the scale of individual fish at individual dams and the scale of metapopulations in a river basin. The challenge will be to learn from past efforts and reconnect North American sturgeon populations in a way that promotes range expansion and facilitates population recovery.« less

Reconnecting fragmented sturgeon populations in North American rivers

USGS Publications Warehouse

Jager, Henriette; Parsley, Michael J.; Cech, Joseph J. Jr.; McLaughlin, R.L.; Forsythe, Patrick S.; Elliott, Robert S.

2016-01-01

The majority of large North American rivers are fragmented by dams that interrupt migrations of wide-ranging fishes like sturgeons. Reconnecting habitat is viewed as an important means of protecting sturgeon species in U.S. rivers because these species have lost between 5% and 60% of their historical ranges. Unfortunately, facilities designed to pass other fishes have rarely worked well for sturgeons. The most successful passage facilities were sized appropriately for sturgeons and accommodated bottom-oriented species. For upstream passage, facilities with large entrances, full-depth guidance systems, large lifts, or wide fishways without obstructions or tight turns worked well. However, facilitating upstream migration is only half the battle. Broader recovery for linked sturgeon populations requires safe “round-trip” passage involving multiple dams. The most successful downstream passage facilities included nature-like fishways, large canal bypasses, and bottom-draw sluice gates. We outline an adaptive approach to implementing passage that begins with temporary programs and structures and monitors success both at the scale of individual fish at individual dams and the scale of metapopulations in a river basin. The challenge will be to learn from past efforts and reconnect North American sturgeon populations in a way that promotes range expansion and facilitates population recovery.

Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam, 2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weiland, Mark A.; Woodley, Christa M.; Ploskey, Gene R.

This report presents survival, behavioral, and fish passage results for yearling and subyearling Chinook salmon smolts and juvenile steelhead tagged with JSATS acoustic micro-transmitters as part of a survival study conducted at John Day Dam during 2010. This study was designed to evaluate the passage and survival of yearling and subyearling Chinook salmon and juvenile steelhead to assist managers in identifying dam operations for compliance testing as stipulated by the 2008 Federal Columbia River Power System Biological Opinion and the 2008 Columbia Basin Fish Accords. Survival estimates were based on a single-release survival estimate model.

Development of Operational Protocols for Electric Barrier Systems on the Chicago Sanitary and Ship Canal: Induction of Passage-Preventing Behaviors in Small Sizes of Silver Carp

DTIC Science & Technology

2015-07-01

carp Hypophthalmichthys molitrix during and after the electrical exposures were monitored. Fish used in the experiment were between 5.4 – 11.0 inches...were tested, three of which proved effective in stunning all fish in each treatment during the 24-second exposures. Outcomes indicated the...for blocking passage of these fish through the electrified zone. Therefore, the most effective combination of 15 Hz pulse frequency, 0.79 V/cm, 6.5 ms

Comparative Study of Barotrauma Risk during Fish Passage through Kaplan Turbines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richmond, Marshall C.; Romero-Gomez, Pedro; Serkowski, John A.

Rapid pressure changes in hydroelectric turbine flows can cause barotrauma that can be hazardous to the passage of fish, in particular migratory juvenile salmonids. Although numerous laboratory tests have evaluated the effect of rapid decompression in fish species of relevance, numerical modeling studies offer the advantage of predicting, for new turbine designs, the potential risks of mortality and injury from rapid pressure change during turbine passage. However, rapid pressure change is only one of several hydraulic risks encountered by fish during turbine passage in addition to blade strike, shear, and turbulence. To better understand the role of rapid pressure changes,more » the present work focuses on the application of a computational fluid dynamics based method for evaluating the risk of pressure-related mortality to fish passing through an early 1960s era original hydroelectric Kaplan turbine at Wanapum Dam (Columbia River, Washington), and a modern advanced Kaplan turbine installed in 2005. The results show that the modeling approach acceptably reproduced the nadir pressure distributions compared to field data previously collected at the site using an autonomous sensor. Our findings show that the new advanced-design unit performs better, in terms of reduced barotrauma risk to fish from exposure to low pressures, than the original turbine unit. The outcomes allow for comparative analyses of turbine designs and operations prior to installation, an advantage that can potentially be integrated in the process of designing new turbine units to achieve superior environmental performance. Overall, the results show that modern turbine designs can achieve the multiple objectives of increasing power generation, lowering cavitation potential, and reducing barotrauma risks to passing fish.« less

A computational fluid dynamics modeling study of guide walls for downstream fish passage

USGS Publications Warehouse

Mulligan, Kevin; Towler, Brett; Haro, Alexander J.; Ahlfeld, David P.

2017-01-01

A partial-depth, impermeable guidance structure (or guide wall) for downstream fish passage is typically constructed as a series of panels attached to a floating boom and anchored across a water body (e.g. river channel, reservoir, or power canal). The downstream terminus of the wall is generally located nearby to a fish bypass structure. If guidance is successful, the fish will avoid entrainment in a dangerous intake structure (i.e. turbine intakes) while passing from the headpond to the tailwater of a hydroelectric facility through a safer passage route (i.e. the bypass). The goal of this study is to determine the combination of guide wall design parameters that will most likely increase the chance of surface-oriented fish being successfully guided to the bypass. To evaluate the flow field immediately upstream of a guide wall, a parameterized computational fluid dynamics model of an idealized power canal was constructed in © ANSYS Fluent v 14.5 (ANSYS Inc., 2012). The design parameters investigated were the angle and depth of the guide wall and the average approach velocity in the power canal. Results call attention to the importance of the downward to sweeping flow ratio and demonstrate how a change in guide wall depth and angle can affect this important hydraulic cue to out-migrating fish. The key findings indicate that a guide wall set at a small angle (15° is the minimum in this study) and deep enough such that sweeping flow dominant conditions prevail within the expected vertical distribution of fish approaching the structure will produce hydraulic conditions that are more likely to result in effective passage.

Road crossing designs and their impact on fish assemblages of Great Plains streams

USGS Publications Warehouse

Bouska, Wesley W.; Paukert, Craig P.

2010-01-01

A mark-recapture field study was conducted to determine fish passage at 5 concrete box culverts and 5 low-water crossings (concrete slabs vented by culverts) as well as 10 control sites (below a natural riffle) in Flint Hills streams of northeastern Kansas. Additionally, we tested the upstream passage of four fish species native to Great Plains streams (Topeka shiner Notropis topeka, green sunfish Lepomis cyanellus, red shiner Cyprinella lutrensis, and southern redbelly dace Phoxinus erythrogaster) through three simulated crossing designs (box culverts, round corrugated culverts, and natural rock riffles) at water velocities of 0.1 to 1.1 m/s in an experimental stream. The field study indicated that cyprinids were twice as likely to move upstream of box culverts than low-water crossings and 1.4 times as likely to move upstream of control reaches than any crossing type. The best models indicated that the proportion of cyprinids that moved upstream increased with decreased culvert slope and length, perching, and increased culvert width. Our controlled experiment indicated that fish can move through velocities up to 1.1 m/s in a 1.86-m simulated stream and that the proportion of fish that moved upstream did not differ among crossing designs for southern redbelly dace, green sunfish, or Topeka shiner; however, natural rock riffles had lower proportional movements (mean = 0.19) than the box (0.38) or corrugated culvert designs (0.43) for red shiners. Water velocity did not affect the proportional upstream movement of any species except that of Topeka shiners, which increased with water velocity. Crossing design alone may not determine fish passage, and water velocities up to 1.1 m/s may not affect the passage of many Great Plains fishes. Barriers to fish movement may be the result of other factors (e.g., perching, slope, and crossing length). The use of properly designed and installed crossings has promise in conserving Great Plains stream fishes.

Evaluation of swimming performance for fish passage of longnose dace Rhinichthys cataractae using an experimental flume.

PubMed

Dockery, D R; McMahon, T E; Kappenman, K M; Blank, M

2017-03-01

The swimming performance of longnose dace Rhinichthys cataractae, the most widely distributed minnow (Cyprinidae) in North America, was assessed in relation to potential passage barriers. The study estimated passage success, maximum ascent distances and maximum sprint speed in an open-channel flume over a range of water velocities and temperatures (10·7, 15·3 and 19·3° C). Rhinichthys cataractae had high passage success (95%) in a 9·2 m flume section at mean test velocities of 39 and 64 cm s -1 , but success rate dropped to 66% at 78 cm s -1 . Only 20% of fish were able to ascend a 2·7 m section with a mean velocity of 122 cm s -1 . Rhinichthys cataractae actively selected low-velocity pathways located along the bottom and corners of the flume at all test velocities and adopted position-holding behaviour at higher water velocities. Mean volitional sprint speed was 174 cm s -1 when fish volitionally sprinted in areas of high water velocities. Swimming performance generally increased with water temperature and fish length. Based on these results, fishways with mean velocities <64 cm s -1 should allow passage of most R. cataractae. Water velocities >100 cm s -1 within structures should be limited to short distance (<1 m) and structures with velocities ≥158 cm s -1 would probably represent movement barriers. Study results highlighted the advantages of evaluating a multitude of swimming performance metrics in an open-channel flume, which can simulate the hydraulic features of fishways and allow for behavioural observations that can facilitate the design of effective passage structures. © 2016 The Fisheries Society of the British Isles.

Development of computational fluid dynamics--habitat suitability (CFD-HSI) models to identify potential passage--Challenge zones for migratory fishes in the Penobscot River

USGS Publications Warehouse

Haro, Alexander J.; Dudley, Robert W.; Chelminski, Michael

2012-01-01

A two-dimensional computational fluid dynamics-habitat suitability (CFD–HSI) model was developed to identify potential zones of shallow depth and high water velocity that may present passage challenges for five anadromous fish species in the Penobscot River, Maine, upstream from two existing dams and as a result of the proposed future removal of the dams. Potential depth-challenge zones were predicted for larger species at the lowest flow modeled in the dam-removal scenario. Increasing flows under both scenarios increased the number and size of potential velocity-challenge zones, especially for smaller species. This application of the two-dimensional CFD–HSI model demonstrated its capabilities to estimate the potential effects of flow and hydraulic alteration on the passage of migratory fish.

Turbulence investigation and reproduction for assisting downstream migrating juvenile salmonids, Part II of II: Effects of induced turbulence on behavior of juvenile salmon, 2001-2005 final report

USGS Publications Warehouse

Perry, R.; Farley , M.; Hansen, G.; Morse , J.; Rondorf, D.

2005-01-01

Passage through dams is a major source of mortality of anadromous juvenile salmonids because some populations must negotiate up to eight dams in Columbia and Snake rivers. Dams cause direct mortality when fish pass through turbines, but dams may also cause indirect mortality by altering migration conditions in rivers. Forebays immediately upstream of dams have decreased the water velocity of rivers and may contribute substantially to the total migration delay of juvenile salmonids. Recently, Coutant (2001a) suggested that in addition to low water velocities, lack of natural turbulence may contribute to migration delay by causing fish to lose directional cues. Coutant (2001a) further hypothesized that restoring turbulence in dam forebays may reduce migration delay by providing directional cues that allow fish to find passage routes more quickly (Coutant 2001a). Although field experiments have yielded proof of the concept of using induced turbulence to guide fish to safe passage routes, little is known about mechanisms actually causing behavioral changes. To test hypotheses about how turbulence influences movement and behavior of migrating juvenile salmonids, we conducted two types of controlled experiments at Cowlitz Falls Dam, Washington. A common measure of migration delay is the elapsed time between arrival at, and passage through, a dam. Therefore, for the first set of experiments, we tested the effect of induced turbulence on the elapsed time needed for fish to traverse through a raceway and pass over a weir at its downstream end (time trial experiment). If turbulence helps guide fish to passage routes, then fish should pass through the raceway quicker in the presence of appropriately scaled and directed turbulent cues. Second, little is known about how the physical properties of water movement provide directional cues to migrating juvenile salmonids. To examine the feasibility of guiding fish with turbulence, we tested whether directed turbulence could guide fish into one of two channels in the raceway, and subsequently cause them to pass disproportionately over the weir where turbulent cues were aimed (guidance experiment). Last, we measured and mapped water velocity and turbulence during the experiments to understand water movement patterns and the spatial distribution of turbulence in the raceways.

Ports and Waterways Safety Assessment Workshop Report for Passamaquoddy Bay, ME

DTIC Science & Technology

2006-10-04

more impacted/conducted than commercial and recreational fishing)…clammers operate in the area. Sea cucumbers , herring. • Recreational fishing...discussed. The transit route from sea to Eastport consists of passage through the Bay of Fundy to Head Harbor Passage and Friar Roads. Vessels calling...more enforcement of regulations, conduct more at sea boarding. 1 Not Defined • Require mandatory or standardized equipment 1 Not Defined • Provide

Hydrologic and hydraulic factors affecting passage of paddlefish through dams in the Upper Mississippi River

USGS Publications Warehouse

Zigler, S.J.; Dewey, M.R.; Knights, B.C.; Runstrom, A.L.; Steingraeber, M.T.

2004-01-01

Populations of paddlefish Polyodon spathula have been adversely affected by dams that can block their movements. Unlike high-head dams that preclude fish passage (unless they are equipped with fishways), the dams on the upper Mississippi River are typically low-head dams with bottom release gates that may allow fish passage under certain conditions. We evaluated the relation of dam head and river discharge to the passage of radio-tagged paddlefish through dams in the upper Mississippi River. Radio transmitters were surgically implanted into 71 paddlefish from Navigation Pools 5A and 8 of the upper Mississippi River and from two tributary rivers during fall 1994 through fall 1996. We tracked paddlefish through September 1997 and documented 53 passages through dams, 20 upstream and 33 downstream. Passages occurred mostly during spring (71%) but also occurred sporadically during summer and fall (29%). Spring passages varied among years in response to hydrologic conditions. We evaluated patterns in upstream and downstream passages with Cox proportional hazard regression models. Model results indicated that dam head height strongly affected the upstream passage of paddlefish but not the downstream passage. Several paddlefish, however, passed upstream through a dam during periods when the minimum head at the dam was substantial ( greater than or equal to 1m). In these cases, we hypothesize that paddlefish moved upstream through the lock chamber.

Is motivation important to brook trout passage through culverts?

USGS Publications Warehouse

Goerig, Elsa; Castro-Santos, Theodore R.

2017-01-01

Culverts can restrict movement of stream-dwelling fish. Motivation to enter and ascend these structures is an essential precursor for successful passage. However, motivation is challenging to quantify. Here, we use attempt rate to assess motivation of 447 brook trout (Salvelinus fontinalis) entering three culverts under a range of hydraulic, environmental, and biological conditions. A passive integrated transponder system allowed for the identification of passage attempts and success of individual fish. Attempt rate was quantified using time-to-event analysis allowing for time-varying covariates and recurrent events. Attempt rate was greatest during the spawning period, at elevated discharge, at dusk, and for longer fish. It decreased during the day and with increasing number of conspecifics downstream of the culvert. Results also show a positive correlation between elevated motivation and successful passage. This study enhances understanding of factors influencing brook trout motivation to ascend culverts and shows that attempt rate is a dynamic phenomenon, variable over time and among individuals. It also presents methods that could be used to investigate other species’ motivation to pass natural or anthropogenic barriers.

Fish as vectors in the dispersal of Bythotrephes cederstroemi: Diapausing eggs survive passage through the gut

USGS Publications Warehouse

Jarnagin, S.T.; Swan, B.K.; Kerfoot, W.C.

2000-01-01

1. Bythotrephes cederstroemi (Crustacea: Onychopoda: Cercopagidae) is an introduced invertebrate predator currently spreading through the Laurentian Great Lakes region of North America. We examined a previously unsuspected way in which B. cederstroemi may be dispersed by fish by their consumption of diapausing eggs. 2. Ninety-four percentage of the mature B. cederstroemi diapausing eggs consumed by fish were egested apparently intact. This proportion is considerably above previous estimates for the ephippial eggs of Daphnia. The hatching success of diapausing eggs was compared among four categories: (a) eggs released naturally by B. cederstroemi (control, 73% hatched (b) eggs released during 'stressful confinement' (46% hatched) (c) eggs dissected from dead females (13% hatched) and (d) eggs recovered from faecal pellets following consumption by fish (viable gut passage experiment, 41% hatched). 3. Samples of small fish and B. cederstroemi were collected simultaneously. Examination of gut contents revealed that fish contained B. cederstroemi diapausing eggs and that B. cederstroemi bearing resting eggs were consumed selectively over those without eggs. Moreover, fish selected B. cederstroemi bearing mature rather than immature diapausing eggs. 4. The fact that diapausing eggs survive gut passage is important for the dispersal of B. cederstroemi. Fish often move between the pelagic and littoral zones of lakes and may thus disperse diapausing eggs widely. Fish may also move between lakes connected by river systems and can be caught and passively dispersed by anglers or piscivorous birds. Our results demonstrate the potential for fish to act as vectors in the spread of B. cederstroemi.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ploskey, Gene R.; Weiland, Mark A.; Carlson, Thomas J.

The purpose of this study was to estimate dam passage and route specific survival rates for subyearling Chinook salmon smolts to a primary survival-detection array located 81 km downstream of the dam, evaluate a BGS located in the B2 forebay, and evaluate effects of two spill treatments. The 2010 study also provided estimates of forebay residence time, tailrace egress time, spill passage efficiency (SPE), and spill + B2 Corner Collector (B2CC) efficiency, as required in the Columbia Basin Fish Accords. In addition, the study estimated forebay passage survival and survival of fish traveling from the forebay entrance array, through themore » dam and downstream through 81 km of tailwater.« less

Evaluation of Boundary Dam spillway using an Autonomous Sensor Fish Device

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Z. D.; Duncan, J. P.; Arnold, J. L.

Fish passage conditions over spillways are important for the operations of hydroelectric dams because spillways are usually considered as a common alternative passage route to divert fish from the turbines. The objectives of this study were to determine the relative potential of fish injury during spillway passage both before and after the installation of baffle blocks at Boundary Dam, and to provide validation data for a model being used to predict total dissolved gas levels. Sensor Fish were deployed through a release system mounted on the face of the dam in the forebay. Three treatments, based on the lateral positionmore » on the spillway, were evaluated for both the baseline and post-modification evaluations: Left Middle, Right Middle, and Right. No significant acceleration events were detected in the forebay, gate, or transition regions for any release location; events were only observed on the chute and in the tailrace. Baseline acceleration events observed in the chute region were all classified as strikes, whereas post-modification events included strike and shear on the chute. While the addition of baffle blocks increased the number of significant events observed on the spillway chute, overall fewer events were observed in the tailrace post-modification. Analysis of lateral positioning of passage indicated that the Right Middle treatment was potentially less injurious to fish based on relative frequency of significant events at each location. The construction of baffle blocks on the spillway visibly changed the flow regime. Prior to installation the flow jet was relatively thin, impacting the tailrace as a coherent stream that plunged deeply, possibly contributing to total dissolved gas production. Following baffle block construction, the discharge jet was more fragmented, potentially disrupting the plunge depth and decreasing the time that bubbles would be at depth in the plunge pool. The results in this study support the expected performance of the modified spillway chute: the addition of the baffle blocks generally lessened the depth and impact of entry. This study provides information that can be used to help design and operate spillways for improving fish passage conditions.« less

Education in Engineering and Ecohydrology for Fish Passage

NASA Astrophysics Data System (ADS)

Ahlfeld, D.; Towler, B.

2011-12-01

Historical fish migration routes linking feeding and spawning habitats have been significantly impacted by culverts, dikes, dams, and other barriers on waterways throughout the world. For example an estimated 2.5 million barriers to fish migration exist in the United States. In recent years, there has been an increased focus on removing or mitigating these barriers as an efficient mechanism to restore habitat. Effective design and implementation of these measures requires specialists with skills at the intersection of engineering, hydrology and biology. Recognizing the need for a cadre of engineers with the additional skills in hydraulics and ecohydrology needed to analyze and design solutions for enhancing fish passage in streams and rivers, the University of Massachusetts Amherst now offers a Master of Science in Civil Engineering (MSCE) degree with a specialization in Fish Passage Engineering. The curriculum is offered in conjunction with the U.S. Fish and Wildlife Service and is informed by the recommendations of the Curriculum Working Group of the Bioengineering Section of the American Fisheries Society. The curriculum is offered through the Department of Civil and Environmental Engineering. This presentation will describe the motivation for the degree, the content of coursework and the challenges inherent in developing an interdisciplinary education program spanning biogeosciences and engineering.

Assessing survival of Mid-Columbia River released juvenile salmonids at McNary Dam, Washington, 2008-09

USGS Publications Warehouse

Evans, Scott D.; Walker, Christopher E.; Brewer, Scott J.; Adams, Noah S.

2010-01-01

Few studies have evaluated survival of juvenile salmon over long river reaches in the Columbia River and information regarding the survival of sockeye salmon at lower Columbia River dams is lacking. To address these information gaps, the U.S. Geological Survey was contracted by the U.S. Army Corps of Engineers to evaluate the possibility of using tagged fish released in the Mid-Columbia River to assess passage and survival at and downstream of McNary Dam. Using the acoustic telemetry systems already in place for a passage and survival study at McNary Dam, fish released from the tailraces of Wells, Rocky Reach, Rock Island, Wanapum, and Priest Rapids Dams were detected at McNary Dam and at the subsequent downstream arrays. These data were used to generate route-specific survival probabilities using single-release models from fish released in the Mid-Columbia River. We document trends in passage and survival probabilities at McNary Dam for yearling Chinook and sockeye salmon and juvenile steelhead released during studies in the Mid-Columbia River. Trends in the survival and passage of these juvenile salmonid species are presented and discussed. However, comparisons made across years and between study groups are not possible because of differences in the source of the test fish, the type of acoustic tags used, the absence of the use of passive integrated transponder tags in some of the release groups, differences in tagging and release protocols, annual differences in dam operations and configurations, differences in how the survival models were constructed (that is, number of routes that could be estimated given the number of fish detected), and the number and length of reaches included in the analysis (downstream reach length and arrays). Despite these differences, the data we present offer a unique opportunity to examine the migration behavior and survival of a group of fish that otherwise would not be studied. This is particularly true for sockeye salmon because little information is available about their survival as they pass hydroelectric dams in the lower Columbia River. Collecting information on fish released in the Mid-Columbia River, as well as on fish released 8 kilometers upstream of McNary Dam, allowed us to evaluate similarities and differences in passage and survival probabilities. In general, juvenile salmonids released in the Mid-Columbia River and detected at and downstream of McNary Dam showed trends in passage and survival probabilities that were similar to fish released 8 kilometers upstream of McNary Dam. This suggests that increased migration time or length of migration had little effect on behavior and survival of Mid-Columbia River released juvenile salmonids detected at McNary Dam.

Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam Sluiceway, 2005

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Khan, Fenton; Hedgepeth, J

2006-06-01

The U.S. Army Corps of Engineers Portland District engaged the Pacific Northwest National Laboratory to evaluate fish passage at The Dalles Dam powerhouse in 2005. The goal of the study was to provide information on smolt passage that will inform decisions on long-term measures and operations to enhance sluiceway passage and reduce turbine passage to improve smolt survival at the dam. The study addressed one of the main programs dedicated to improving juvenile salmonid survival at The Dalles Dam: Surface Flow Bypass. The study objectives (see below) were met using a combination of hydroacoustic and hydraulic data. The study incorporatedmore » fixed-location hydroacoustic methods across the entire powerhouse, with especially intense sampling using multiple split-beam transducers at all sluiceway portals. We did not sample fish passage at the spillway in 2005. In the sluiceway nearfield, we used an acoustic camera to track fish movements. The fish data were interpreted with hydraulic data from a computational fluid dynamics (CFD) model. Fish passage data were collected in the framework of an “experiment” using a randomized block design (3-day treatments; two treatments) to compare two sluiceway operational configurations: Sluice 2+5 and Sluice 2+19 (six gates open for each configuration). Total project outflow was 76% of the 10-year average for spring and 71% of the 10-year average for summer. Based on these findings, we make the following recommendations: 1) The sluice should be operated 24 h/d from April until November. 2) Open six rather than three sluice gates to take advantage of the maximum hydraulic capacity of the sluiceway. 3) Open the three gates above the western-most operating main turbine unit and the three gates at MU 8 where turbine passage rates are relatively high. 4) Operate the turbine units below open sluice gates as a standard fish operations procedure. 5) Develop hydraulic and entrance enhancements to the sluiceway to tap the potential of The Dalles Dam sluiceway to be highly efficient and effective at passing juvenile salmonids. 6) Consider the following elements for surface flow bypasses during design of any sluiceway enhancements at The Dalles Dam: Form an extensive surface flow bypass flow net (surface bypass discharge greater than ~7% of total project discharge) at both west and east ends of the dam; Create a gradual increase in water velocity approaching the surface flow bypass (ideally, acceleration < 1 m/s per meter); Make water velocities at an entrance high enough (> 3 m/s) to entrain the subject juvenile fishes, e.g., 10,000 cfs or so; Adapt the shape and orientation of the surface entrance(s) to fit site-specific features, i.e., test a Removable Sluiceway Weir. 7)The Dalles Dam sluiceway has potential to be highly efficient and effective at passing juvenile salmonids. We recommend tapping this potential with enhancements to the sluiceway.« less

Reconnecting fragmented sturgeon populations in North American rivers

DOE PAGES

Jager, Yetta; Forsythe, Patrick S.; McLaughlin, Robert L.; ...

2016-02-24

The majority of large North American rivers are fragmented by dams that interrupt migrations of wide-ranging fishes like sturgeons. Reconnecting habitat is viewed as an important means of protecting sturgeon species in U.S. rivers because these species have lost between 5% and 60% of their historical ranges. Unfortunately, facilities designed to pass other fishes have rarely worked well for sturgeons. The most successful passage facilities were sized appropriately for sturgeons and accommodated bottom-oriented species. For upstream passage, facilities with large entrances, full-depth guidance systems, large lifts, or wide fishways without obstructions or tight turns worked well. However, facilitating upstream migrationmore » is only half the battle. Broader recovery for linked sturgeon populations requires safe round-trip passage involving multiple dams. The most successful downstream passage facilities included nature-like fishways, large canal bypasses, and bottom-draw sluice gates. We outline an adaptive approach to implementing passage that begins with temporary programs and structures and monitors success both at the scale of individual fish at individual dams and the scale of metapopulations in a river basin. The challenge will be to learn from past efforts and reconnect North American sturgeon populations in a way that promotes range expansion and facilitates population recovery.« less

Improvement of Anadromous Fish Habitat and Passage in Omak Creek, 2008 Annual Report : February 1, 2008 to January 31, 2009.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dasher, Rhonda; Fisher, Christopher

2009-06-09

During the 2008 season, projects completed under BPA project 2000-100-00 included installation of riparian fencing, maintenance of existing riparian fencing, monitoring of at-risk culverts and installation of riparian vegetation along impacted sections of Omak Creek. Redd and snorkel surveys were conducted in Omak Creek to determine steelhead production. Canopy closure surveys were conducted to monitor riparian vegetation recovery after exclusion of cattle since 2000 from a study area commonly known as the Moomaw property. Additional redd and fry surveys were conducted above Mission Falls and in the lower portion of Stapaloop Creek to try and determine whether there has beenmore » successful passage at Mission Falls. Monitoring adult steelhead trying to navigate the falls resulted in the discovery of shallow pool depth at an upper pool that is preventing many fish from successfully navigating the entire falls. The Omak Creek Habitat and Passage Project has worked with NRCS to obtain additional funds to implement projects in 2009 that will address passage at Mission Falls, culvert replacement, as well as additional riparian planting. The Omak Creek Technical Advisory Group (TAG) is currently revising the Omak Creek Watershed Assessment. In addition, the group is revising strategy to focus efforts in targeted areas to provide a greater positive impact within the watershed. In 2008 the NRCS Riparian Technical Team was supposed to assess areas within the watershed that have unique problems and require special treatments to successfully resolve the issues involved. The technical team will be scheduled for 2009 to assist the TAG in developing strategies for these special areas.« less

Behavior and dam passage of juvenile Chinook salmon and juvenile steelhead at Detroit Reservoir and Dam, Oregon, March 2012-February 2013

USGS Publications Warehouse

Beeman, John W.; Hansel, Hal C.; Hansen, Amy C.; Evans, Scott D.; Haner, Philip V.; Hatton, Tyson W.; Kofoot, Eric E.; Sprando, Jamie M.; Smith, Collin D.

2014-01-01

The in-reservoir movements and dam passage of individual juvenile Chinook salmon (Oncorhynchus tshawytscha) and juvenile steelhead (Oncorhynchus mykiss) were studied at Detroit Reservoir and Dam, near Detroit, Oregon, during 2012 and 2013. The goal of the study was to provide data to inform decisions about future downstream passage alternatives and factors affecting downstream passage rates with the existing dam configuration. In 2012, 468 juvenile Chinook salmon and 200 juvenile steelhead were tagged and released during a 3-month period in the spring, and another 514 juvenile Chinook salmon were tagged and released during a 3-month period in the fall. The fish were surgically implanted with a small acoustic transmitter with an expected life of about 3 months and a passive integrated transponder tag with an indefinite life, and were released into the two main tributaries several kilometers upstream of the reservoir. Juvenile Chinook salmon migrated from the release sites to the reservoir in a greater proportion than juvenile steelhead, but once in the reservoir, juvenile steelhead migrated to the forebay faster and had a higher dam passage rate than juvenile Chinook salmon. The routes available for passing water and fish varied throughout the year, with low reservoir elevations in winter and high reservoir elevations in summer in accordance with the flood-control purpose of the dam. Most dam passage was through the spillway during the spring and summer, when the reservoir elevation was high and the spillway and powerhouse were the most common routes in operation, and via the powerhouse during the fall and winter period, when the reservoir elevation was low and the regulating outlet and powerhouse were the most common routes in operation. Few tagged fish passed when the powerhouse was the only route in operation. Dam passage rates during the spring and summer were greatest at night, increased with dam discharge, and were greater when water was passed freely over the spillway compared to when it was controlled by the spillway Tainter gates. Dam passage rates during the fall and winter, when the reservoir elevation usually was too low for spillway operation, were lower than during the spring and summer, negatively related to reservoir elevation, and positively related to dam discharge, though the latter relation diminished as reservoir elevation decreased. Fish locations near the dam from estimates of three-dimensional positions often were near the locations of dam discharge and fish depths were surface oriented relative to the depth of the forebay. Fish passage rates with the existing dam configuration were greatest when the spillway was in operation and were lowest when the powerhouse was the only route in operation; the latter result may be related to the relatively low magnitude or variability in discharge during that condition. The available data suggest that a properly designed surface outlet could be a viable passage route for juvenile Chinook salmon and juvenile steelhead at Detroit Dam. A second year of data collection based on a similar study design was complete at the time of this report.

Swimming behaviour and ascent paths of brook trout in a corrugated culvert

USGS Publications Warehouse

Goerig, Elsa; Bergeron, Normand E.; Castro-Santos, Theodore R.

2017-01-01

Culverts may restrict fish movements under some hydraulic conditions such as shallow flow depths or high velocities. Although swimming capacity imposes limits to passage performance, behaviour also plays an important role in the ability of fish to overcome velocity barriers. Corrugated metal culverts are characterized by unsteady flow and existence of low‐velocity zones, which can improve passage success. Here, we describe swimming behaviour and ascent paths of 148 wild brook trout in a 1.5‐m section of a corrugated metal culvert located in Raquette Stream, Québec, Canada. Five passage trials were conducted in mid‐August, corresponding to specific mean cross‐sectional flow velocities ranging from 0.30 to 0.63 m/s. Fish were individually introduced to the culvert and their movements recorded with a camera located above the water. Lateral and longitudinal positions were recorded at a rate of 3 Hz in order to identify ascent paths. These positions were related to the distribution of flow depths and velocities in the culvert. Brook trout selected flow velocities from 0.2 to 0.5 m/s during their ascents, which corresponded to the available flow velocities in the culvert at the low‐flow conditions. This however resulted in the use of low‐velocity zones at higher flows, mainly located along the walls of the culvert. Some fish also used the corrugations for sheltering, although the behaviour was marginal and did not occur at the highest flow condition. This study improves knowledge on fish behaviour during culvert ascents, which is an important aspect for developing reliable and accurate estimates of fish passage ability.

Compliance Monitoring of Juvenile Subyearling Chinook Salmon Survival and Passage at The Dalles Dam, Summer 2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Carlson, Thomas J.; Skalski, John R.

2010-12-21

The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon smolts at The Dalles Dam during summer 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.93 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 2 km below the dam The forebay-to-tailrace survival estimate satisfies the “BRZ-to-BRZ” survival estimate called for in the Fish Accords. , asmore » well as the forebay residence time, tailrace egress time, and spill passage efficiency, as required in the Columbia Basin Fish Accords. The estimate of dam survival for subyearling Chinook salmon at The Dalles in 2010 was 0.9404 with an associated standard error of 0.0091.« less

Passage and survival probabilities of juvenile Chinook salmon at Cougar Dam, Oregon, 2012

USGS Publications Warehouse

Beeman, John W.; Evans, Scott D.; Haner, Philip V.; Hansel, Hal C.; Hansen, Amy C.; Smith, Collin D.; Sprando, Jamie M.

2014-01-01

This report describes studies of juvenile-salmon dam passage and apparent survival at Cougar Dam, Oregon, during two operating conditions in 2012. Cougar Dam is a 158-meter tall rock-fill dam used primarily for flood control, and passes water through a temperature control tower to either a powerhouse penstock or to a regulating outlet (RO). The temperature control tower has moveable weir gates to enable water of different elevations and temperatures to be drawn through the dam to control water temperatures downstream. A series of studies of downstream dam passage of juvenile salmonids were begun after the National Oceanic and Atmospheric Administration determined that Cougar Dam was impacting the viability of anadromous fish stocks. The primary objectives of the studies described in this report were to estimate the route-specific fish passage probabilities at the dam and to estimate the survival probabilities of fish passing through the RO. The first set of dam operating conditions, studied in November, consisted of (1) a mean reservoir elevation of 1,589 feet, (2) water entering the temperature control tower through the weir gates, (3) most water routed through the turbines during the day and through the RO during the night, and (4) mean RO gate openings of 1.2 feet during the day and 3.2 feet during the night. The second set of dam operating conditions, studied in December, consisted of (1) a mean reservoir elevation of 1,507 ft, (2) water entering the temperature control tower through the RO bypass, (3) all water passing through the RO, and (4) mean RO gate openings of 7.3 feet during the day and 7.5 feet during the night. The studies were based on juvenile Chinook salmon (Oncorhynchus tshawytscha) surgically implanted with radio transmitters and passive integrated transponder (PIT) tags. Inferences about general dam passage percentage and timing of volitional migrants were based on surface-acclimated fish released in the reservoir. Dam passage and apparent survival probabilities were estimated using the Route-Specific-Survival Model with data from surface-acclimated fish released near the water surface directly upstream of the temperature control tower (treatment group) and slightly downstream of the dam (control group). In this study, apparent survival is the joint probability of surviving and migrating through the study area during the life of the transmitters. Two rearing groups were used to enable sufficient sample sizes for the studies. The groups differed in feed type, and for the December study only, the rearing location. Fish from each group were divided nearly equally among all combinations of release sites, release times, and surgeons. The sizes, travel times, and survivals of the two rearing groups were similar. There were statistical differences in fish lengths and travel times of the two groups, but they were small and likely were not biologically meaningful. There also was evidence of a difference in single-release estimates of survival between the rearing groups during the December study, but the differences had little effect on the relative survival estimates so the analyses of passage and survival were based on data from the rearing groups pooled. Conditions during the December study were more conducive to passing volitionally migrating fish than conditions during the November study. The passage percentage of the fish released in the reservoir was similar between studies (about 70 percent), but the passage occurred in a median of 1.0 day during the December study and a median of 9.3 days during the November study. More than 93 percent of the dam passage of volitionally migrating fish occurred at night during each study. This finding corroborates results of previous studies at Cougar Dam and suggests that the operating conditions at night are most important to volitionally migrating fish, given the current configuration of the dam. Most fish released near the temperature control tower passed through the RO. A total of 92.2 percent of the treatment group passed through the RO during the November study and the RO was the only route open during the December study. The assumptions of the survival model were either met or adjusted for during each study. There was little evidence that tagger skill or premature failure of radio transmitters had an effect on survival estimates. There were statistically significant differences in travel times between treatment and control groups through several of the river reaches they had in common, but the differences were typically only a few hours, and the two groups likely experienced the same in-river conditions. There was direct evidence of bias due to detection of euthanized fish with live transmitters released as part of the study design. The bias was ameliorated by adjusting the survival estimates for the probability of detecting dead fish with live transmitters, which reduced the estimated survival probabilities by about 0.02. The data and models indicated that the treatment effect was not fully expressed until the study reach terminating with Marshall Island Park on the Willamette River, a distance of 105.8 kilometers downstream of Cougar Dam. This was the first reach in which the 95-percent confidence interval of the estimated reach-specific relative survival overlapped 1.0, indicating similar survival of treatment and control groups. The median travel time of the treatment group from release to Marshall Island Park was 1.64 days during the November study and 1.36 days during the December study. The survival probability of fish that passed into the RO was greater during the December study than during the November study. The relative survival probability of fish passing through the RO was 0.4594 (standard error [SE] 0.0543) during the November study and 0.7389 (SE 0.1160) during the December study. These estimates represent relative survival probabilities from release near Cougar Dam to the Marshall Island site. The estimated survival probability of RO passage was lower than previous studies based on balloon and PIT tags, but higher than a similar study based on radio transmitters. We suggest that, apart from dam operations, the differences in survival primarily are due to the release location. We hypothesize that the balloon- and PIT-tagged fish released through a hose at a point near the RO gate opening experienced more benign conditions than the radio-tagged fish passing the RO volitionally. This hypothesis could be tested with further study. An alternative hypothesis is that some live fish remained within the study area beyond the life of their radio transmitter. The results from these and previous studies indicate that entrainment and survival of juvenile salmonids passing Cougar Dam varies with dam operating conditions. The condition most conducive to dam passage has been the discharge and low pool elevation condition tested during December 2012. That condition included large RO gate openings and was the condition with the highest dam passage survival.

Lymphocystis virus: isolation and propagation in centrarchid fish cell lines.

PubMed

Wolf, K; Gravell, M; Malsberger, R G

1966-02-25

A virus from fish with lymphocystis disease was isolated in fish cell cultures. Eleven serial transfers were made and the pathognomonic lymphocystis cells were produced in vitro in each transfer. Fish inoculated with 6th- and 9th-passage material developed the disease, and virus was reisolated front them.

Innovative techniques for analyzing the three-dimensional behavioral results from acoustically tagged fish

NASA Astrophysics Data System (ADS)

Steig, Tracey W.; Timko, Mark A.

2005-04-01

Acoustic tags were used to monitor the swimming patterns of downstream migrating salmon smolts approaching various dams on the Columbia River, USA. Downstream migrating yearling chinook (Oncorhynchus tshawytscha), steelhead (Oncorhynchus mykiss), sockeye (Oncorhynchus nerka), and sub-yearling chinook smolts were surgically implanted with acoustic tags. Fish were tracked in three-dimensions as they approached and passed into the turbine intakes, spillways, and surface bypass channel entrances at the dams during the 2004 spring and summer outmigrations. A number of advances in the analysis techniques and software have been made over the past few years. Some of these improvements include the development of various fish density algorithms, stream trace modeling analysis, and advances of three-dimensional animation programs. Three-dimensional tracks of fish approaching the turbine intakes, spillways, and surface bypass channel entrances will be presented. Concentrations of fish passage will be presented as three-dimensional fish densities superimposed over dam structures. Stream trace modeling animation will be presented showing predicted fish passage routes.

Ascent ability of brown trout, Salmo trutta, and two Iberian cyprinids − Iberian barbel, Luciobarbus bocagei, and northern straight-mouth nase, Pseudochondrostoma duriense − in a vertical slot fishway

USGS Publications Warehouse

Sanz-Ronda, Fco. Javier; Bravo-Cordoba, F.J.; Fuentes-Perez, J.F.; Castro-Santos, Theodore R.

2016-01-01

Passage performance of brown trout (Salmo trutta), Iberian barbel (Luciobarbus bocagei), and northern straight-mouth nase (Pseudochondrostoma duriense) was investigated in a vertical slot fishway in the Porma River (Duero River basin, Spain) using PIT telemetry. We analysed the effects of different fishway discharges on motivation and passage success. Both cyprinid species ascended the fishway easily, performing better than the trout despite their theoretically weaker swimming performance. Fishway discharge affected fish motivation although it did not clearly influence passage success. Observed results can guide design and operation criteria of vertical slot fishways for native Iberian fish.

Bypass system modification at Bonneville Dam on the Columbia River improved the survival of juvenile salmon

USGS Publications Warehouse

Ferguson, J.W.; Sandford, B.P.; Reagan, R.E.; Gilbreath, L.G.; Meyer, E.B.; Ledgerwood, R.D.; Adams, N.S.

2007-01-01

From 1987 to 1992, we evaluated a fish bypass system at Bonneville Dam Powerhouse 2 on the Columbia River. The survival of subyearling Chinook salmon Oncorhynchus tshawytscha released into the system ranged from 0.774 to 0.911 and was significantly lower than the survival of test fish released into turbines and the area immediately below the powerhouse where bypass system flow reentered the river. Yearling and subyearling Chinook salmon and yearling coho salmon O. kisutch released into the bypass system were injured or descaled. Also, levels of blood plasma cortisol and lactate were significantly higher in yearling and subyearling Chinook salmon that passed through the bypass system than in fish released directly into a net located over the bypass exit. This original system was then extensively modified using updated design criteria, and the site where juvenile fish reentered the river was relocated 2.8 km further downstream to reduce predation on bypassed fish by northern pikeminnow Ptychocheilus oregonensis. Based on studies conducted from 1999 to 2001, the new bypass system resulted in high fish survival, virtually no injuries to fish, fish passage times that were generally similar to water travel times, and mild stress responses from which fish recovered quickly. The mean estimated survival of subyearling Chinook salmon passing through the new bypass system was 0.946 in 2001, which was an usually low-flow year. Survival, physical condition, passage timing, and blood physiological indicators of stress were all useful metrics for assessing the performance of both bypass systems and are discussed. The engineering and hydraulic criteria used to design the new bypass system that resulted in improved fish passage conditions are described.

Juvenile Salmonid survival, passage, and egress at McNary Dam during tests of temporary spillway weirs, 2009

USGS Publications Warehouse

Adams, N.S.; Liedtke, T.L.

2010-01-01

The TSWs proved to be a relatively effective way to pass juvenile salmonids at McNary Dam (Summary Tables 1.1, 1.2, and 1.3), as was the case in 2007 and 2008. The TSWs passed about 14% of yearling Chinook salmon and 34% of juvenile steelhead with only 5-10% of total project discharge flowing through the TSWs. The TSWs and adjacent spill bays 16-18 passed 27% of subyearling Chinook salmon in the summer with 6-16% of total project discharge flowing through the TSWs. Based on the number of fish passing per the proportion of water flowing through the spillway (i.e., passage effectiveness), the TSWs were the most effective passage route. Passage effectiveness for fish passing through both TSW structures was 2.0 for yearling Chinook salmon, 5.2 for juvenile steelhead, and 2.7 subyearling Chinook salmon for TSW 20 alone. Higher passage of juvenile steelhead through the TSWs could have resulted from juvenile steelhead being more surface-oriented during migration (Plumb et al. 2004; Beeman et al. 2007; Beeman and Maule 2006). Based on passage performance and effectiveness metrics, TSW 4, located on the north end of the spillway, did not perform as well as TSW 20, located on the south end of the spillway. Passage proportions for TSW 4 were at least half that of the levels observed for TSW 20 for both yearling Chinook salmon and juvenile steelhead. This difference may be attributed to TSW location or other variables such as dam operations. Regardless of which TSW was used by fish passing the dam, survival through both TSWs was high (> 0.98 for paired-release dam survival) for yearling Chinook salmon and juvenile steelhead.

Investigation of culvert hydraulics related to juvenile fish passage. Final research report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barber, M.E.; Downs, R.C.

1996-01-01

Culverts often create barriers to the upstream migration of juvenile fish. The objective of this study was to determine hydraulic characteristics of culverts with different flow conditions. Methods of predicting flow profiles were developed by both Chiu and Mountjoy. Two equations were compared to experimental results. An area of flow corresponding to a predetermined allowable velocity can be calculated using Mountjoy equation. This can then be used in the design of culverts as fish passage guidelines. The report contains a summary of background information, experimental methodology, the results of experimental tests, and an analysis of both the Chiu and Mountjoymore » equations.« less

A Field Evaluation of an External and Neutrally Buoyant Acoustic Transmitter for Juvenile Salmon: Implications for Estimating Hydroturbine Passage Survival

PubMed Central

Brown, Richard S.; Deng, Z. Daniel; Cook, Katrina V.; Pflugrath, Brett D.; Li, Xinya; Fu, Tao; Martinez, Jayson J.; Li, Huidong; Trumbo, Bradly A.; Ahmann, Martin L.; Seaburg, Adam G.

2013-01-01

Turbine-passed fish are exposed to rapid decreases in pressure which can cause barotrauma. The presence of an implanted telemetry tag increases the likelihood of injury or death from exposure to pressure changes, thus potentially biasing studies evaluating survival of turbine-passed fish. Therefore, a neutrally buoyant externally attached tag was developed to eliminate this bias in turbine passage studies. This new tag was designed not to add excess mass in water or take up space in the coelom, having an effective tag burden of zero with the goal of reducing pressure related biases to turbine survival studies. To determine if this new tag affects fish performance or susceptibility to predation, it was evaluated in the field relative to internally implanted acoustic transmitters (JSATS; Juvenile Salmon Acoustic Telemetry System) used widely for survival studies of juvenile salmonids. Survival and travel time through the study reach was compared between fish with either tag type in an area of high predation in the Snake and Columbia rivers, Washington. An additional group of fish affixed with neutrally-buoyant dummy external tags were implanted with passive integrated transponder (PIT) tags and recovered further downstream to assess external tag retention and injury. There were no significant differences in survival to the first detection site, 12 river kilometers (rkm) downstream of release. Travel times were also similar between groups. Conversely, externally-tagged fish had reduced survival (or elevated tag loss) to the second detection site, 65 rkm downstream. In addition, the retention study revealed that tag loss was first observed in fish recaptured approximately 9 days after release. Results suggest that this new tag may be viable for short term (<8 days) single-dam turbine-passage studies and under these situations, may alleviate the turbine passage-related bias encountered when using internal tags, however further research is needed to confirm this. PMID:24204947

A field evaluation of an external and neutrally buoyant acoustic transmitter for juvenile salmon: implications for estimating hydroturbine passage survival.

PubMed

Brown, Richard S; Deng, Z Daniel; Cook, Katrina V; Pflugrath, Brett D; Li, Xinya; Fu, Tao; Martinez, Jayson J; Li, Huidong; Trumbo, Bradly A; Ahmann, Martin L; Seaburg, Adam G

2013-01-01

Turbine-passed fish are exposed to rapid decreases in pressure which can cause barotrauma. The presence of an implanted telemetry tag increases the likelihood of injury or death from exposure to pressure changes, thus potentially biasing studies evaluating survival of turbine-passed fish. Therefore, a neutrally buoyant externally attached tag was developed to eliminate this bias in turbine passage studies. This new tag was designed not to add excess mass in water or take up space in the coelom, having an effective tag burden of zero with the goal of reducing pressure related biases to turbine survival studies. To determine if this new tag affects fish performance or susceptibility to predation, it was evaluated in the field relative to internally implanted acoustic transmitters (JSATS; Juvenile Salmon Acoustic Telemetry System) used widely for survival studies of juvenile salmonids. Survival and travel time through the study reach was compared between fish with either tag type in an area of high predation in the Snake and Columbia rivers, Washington. An additional group of fish affixed with neutrally-buoyant dummy external tags were implanted with passive integrated transponder (PIT) tags and recovered further downstream to assess external tag retention and injury. There were no significant differences in survival to the first detection site, 12 river kilometers (rkm) downstream of release. Travel times were also similar between groups. Conversely, externally-tagged fish had reduced survival (or elevated tag loss) to the second detection site, 65 rkm downstream. In addition, the retention study revealed that tag loss was first observed in fish recaptured approximately 9 days after release. Results suggest that this new tag may be viable for short term (<8 days) single-dam turbine-passage studies and under these situations, may alleviate the turbine passage-related bias encountered when using internal tags, however further research is needed to confirm this.

76 FR 47154 - Proposed Information Collection; Comment Request; Cooperative Game Fish Tagging Report

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-04

... Collection; Comment Request; Cooperative Game Fish Tagging Report AGENCY: National Oceanic and Atmospheric... Game Fish Tagging Program was initiated in 1971 as part of a comprehensive research program resulting from passage of Public Law 86-359, Study of Migratory Game Fish, and other legislative acts under which...

Fish navigation of large dams emerges from their modulation of flow field experience

PubMed Central

Goodwin, R. Andrew; Politano, Marcela; Garvin, Justin W.; Nestler, John M.; Hay, Duncan; Anderson, James J.; Weber, Larry J.; Dimperio, Eric; Smith, David L.; Timko, Mark

2014-01-01

Navigating obstacles is innate to fish in rivers, but fragmentation of the world’s rivers by more than 50,000 large dams threatens many of the fish migrations these waterways support. One limitation to mitigating the impacts of dams on fish is that we have a poor understanding of why some fish enter routes engineered for their safe travel around the dam but others pass through more dangerous routes. To understand fish movement through hydropower dam environments, we combine a computational fluid dynamics model of the flow field at a dam and a behavioral model in which simulated fish adjust swim orientation and speed to modulate their experience to water acceleration and pressure (depth). We fit the model to data on the passage of juvenile Pacific salmonids (Oncorhynchus spp.) at seven dams in the Columbia/Snake River system. Our findings from reproducing observed fish movement and passage patterns across 47 flow field conditions sampled over 14 y emphasize the role of experience and perception in the decision making of animals that can inform opportunities and limitations in living resources management and engineering design. PMID:24706826

Applications of the Sensor Fish Technology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Carlson, Thomas J.; Duncan, Joanne P.

2007-08-28

The Sensor Fish is an autonomous device developed at Pacific Northwest National Laboratory for U.S. Department of Energy (DOE) and Army Corps of Engineers (COE) to better understand the physical conditions fish experience during passage through hydro-turbines and other dam bypass alternatives. Since its initial development in 1997, the Sensor Fish has undergone several design changes to improve its function and extend the range of its use. The most recent Sensor Fish design, the six-degree-of-freedom (6DOF) device, has been deployed successfully to characterize the environment fish experience when they pass through several hydroelectric projects along main stem Columbia and Snakemore » Rivers in the Pacific Northwest. Just as information gathered from crash test dummies can affect automobile design with the installation of protective designs to lessen or prevent human injury, having sensor fish data to quantify accelerations, rotations, and pressure changes, helps identify fish injury mechanisms such as strike, turbulent shear, pressure, and inertial effects, including non-lethal ones such as stunning or signs of vestibular disruption that expose fish to a higher risk of predation by birds and piscivorous fish downstream following passage.« less

Juvenile and resident salmonid movement and passage through culverts

DOT National Transportation Integrated Search

1998-07-01

An outcome of the Washington State Department of Transportation's Juvenile Fish Passage Workshop on September 24, 1997, was agreement that a literature review was necessary to determine the state of knowledge about juvenile salmonid movement and pass...

Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam Turbines, Early Spring 2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khan, Fenton; Royer, Ida M.

2012-02-01

This report presents the results of an evaluation of overwintering summer steelhead (Oncorhynchus mykiss) fallback and early out-migrating steelhead kelts downstream passage at The Dalles Dam turbines during early spring 2011. The study was conducted by Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers, Portland District (USACE) to investigate whether adult steelhead are passing through turbines during early spring before annual sluiceway operations typically begin. The sluiceway surface flow outlet is the optimal non-turbine route for adult steelhead, although operating the sluiceway reduces hydropower production. This is a follow-up study to similar studies of adult steelheadmore » passage at the sluiceway and turbines we conducted in the fall/winter 2008, early spring 2009, fall/winter 2009, and early spring 2010. The goal of the 2011 study was to characterize adult steelhead passage rates at the turbines while the sluiceway was closed so fisheries managers would have additional information to use in decision-making relative to sluiceway operations. Sluiceway operations were not scheduled to begin until April 10, 2011. However, based on a management decision in late February, sluiceway operations commenced on March 1, 2011. Therefore, this study provided estimates of fish passage rates through the turbines, and not the sluiceway, while the sluiceway was open. The study period was March 1 through April 10, 2011 (41 days total). The study objective was to estimate the number and distribution of adult steelhead and kelt-sized targets passing into turbine units. We obtained fish passage data using fixed-location hydroacoustics with transducers deployed at all 22 main turbine units at The Dalles Dam. Adult steelhead passage through the turbines occurred on 9 days during the study (March 9, 12, 30, and 31 and April 2, 3, 5, 7, and 9). We estimated a total of 215 {+-} 98 (95% confidence interval) adult steelhead targets passed through the turbines between March 1 and April 10, 2011. Horizontal distribution data indicated Main Unit 18 passed the majority of fish. Fish passage occurred throughout the day. We conclude that adult steelhead passed through turbines during early spring 2011 at The Dalles Dam.« less

Compliance Monitoring of Subyearling Chinook Salmon Smolt Survival and Passage at Bonneville Dam, Summer 2012

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam

2013-05-01

The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon at Bonneville Dam during summer 2012, as required by the 2008 Federal Columbia River Power System Biological Opinion. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 1 km below the dam, as well as forebay residence time, tailrace egress, and spill passage efficiency, as required in the 2008 Columbia Basin Fish Accords.

Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam, 2009-2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khan, Fenton; Johnson, Gary E.; Weiland, Mark A.

2010-07-31

This report presents the results of an evaluation of overwintering summer steelhead (Oncorhynchus mykiss) fallback and early out-migrating steelhead kelts downstream passage at The Dalles Dam (TDA) sluiceway and turbines during fall/winter 2009 through early spring 2010. The study was conducted by the Pacific Northwest National Laboratory (PNNL) for the U.S. Army Corps of Engineers, Portland District (USACE). The goal of this study was to characterize adult steelhead spatial and temporal distributions and passage rates at the sluiceway and turbines for fisheries managers and engineers to use in decision-making relative to sluiceway operations. The study was from November 1, 2009more » to April 10, 2010. The study was divided into three study periods: Period 1, November 1 - December 15, 2009 for a fall/winter sluiceway and turbine study; Period 2, December 16, 2009 - February 28, 2010 for a turbine only study; Period 3, March 1 - April 10, 2010 for a spring sluiceway and turbine study. Sluiceway operations were scheduled to begin on March 1 for this study; however, because of an oil spill cleanup near the sluice outfall, sluiceway operations were delayed until March 8, 2010, therefore the spring study period did not commence until March 8. The study objectives were to (1) estimate the number and distribution of overwintering summer steelhead fallbacks and kelt-sized acoustic targets passing into the sluiceway and turbines at TDA between November 1 and December 15, 2009 and March 1 and April 10, 2010, and (2) estimate the numbers and distribution of adult steelhead and kelt-sized targets passing into turbine units between December 16, 2009 and February 28, 2010. We obtained fish passage data using fixed-location hydroacoustics. For Period 1, overwintering summer steelhead fallback occurred throughout the 45-day study period. A total of 879 {+-} 165 (95% CI) steelhead targets passed through the powerhouse and sluiceway during November 1 to December 15, 2009. Ninety two percent of these fish passed through the sluiceway. Run timing peaked in early December, but fish continued to pass the dam until the end of the study. Horizontal distribution data indicated that Sluice 1 is the preferred route for these fish during fallback through the dam. Diel distribution for steelhead was variable with no apparent distinct patterns. For Period 2, adult steelhead passage occurred on January 14 and 31 and February 2, 22, and 24. A total of 62 {+-} 40 (95% CI) steelhead targets passed through the powerhouse intakes during December 16, 2009 to March 7, 2010. Horizontal distribution data indicated turbine unit 18 passed the majority of fish. Fish passage occurred during morning periods. Passage did not occur during afternoon or nighttime. For Period 3, the early spring study period, overwintering summer steelhead and early out-migrating steelhead kelt downstream passage occurred throughout the 34-day study period. A total of 1,985 {+-} 234 (95% CI) kelt-size targets were estimated to have passed through the powerhouse sluiceway. Ninety-nine percent of these fish passed through the sluiceway. Run timing peaked in late March and again in early April. Horizontal distribution indicated that Sluice 1 is the preferred route for these adult salmonids as they migrate downstream through the dam. Diel distribution for steelhead was variable with no apparent distinct patterns. The results of this study strongly suggest that operating the TDA sluiceway for steelhead passage (fallbacks and kelts) during the late fall, winter, and early spring months will provide an optimal, non-turbine route for these fishes to pass the dam.« less

Analysis of brook trout spatial behavior during passage attempts in corrugated culverts using near-infrared illumination video imagery

USGS Publications Warehouse

Bergeron, Normand E.; Constantin, Pierre-Marc; Goerig, Elsa; Castro-Santos, Theodore R.

2016-01-01

We used video recording and near-infrared illumination to document the spatial behavior of brook trout of various sizes attempting to pass corrugated culverts under different hydraulic conditions. Semi-automated image analysis was used to digitize fish position at high temporal resolution inside the culvert, which allowed calculation of various spatial behavior metrics, including instantaneous ground and swimming speed, path complexity, distance from side walls, velocity preference ratio (mean velocity at fish lateral position/mean crosssectional velocity) as well as number and duration of stops in forward progression. The presentation summarizes the main results and discusses how they could be used to improve fish passage performance in culverts.

ECOLOGICAL CRITERIA FOR PRIORITIZATION OF CULVERT REPLACEMENT

EPA Science Inventory

Culvert passage issues are gaining national and international focus, because they are implicated in the decline of particular species and in the more general loss of biodiversity in freshwater ecosystems. In the Pacific Northwest, inadequate fish passage at culverts is recognized...

Development of a Nebraska culvert aquatic organism passage screening tool.

DOT National Transportation Integrated Search

2012-12-01

Culverts channelize water relative to natural stream reaches, which can increase the velocity of water passing through them. Increased water velocities can alter stream morphology and create a possible barrier or obstacle to fish passage, which may a...

Culvert Length and Interior Lighting Impacts to Topeka Shiner Passage

DOT National Transportation Integrated Search

2017-11-01

Culverts can act as barriers to fish passage for a number of reasons including insufficient water depth or excess velocity. In addition, concern is being raised over behavioral barriers where culvert conditions elicit an avoidance response that deter...

Habitat and movement of lake sturgeon in the upper Mississippi River system, USA

USGS Publications Warehouse

Knights, Brent C.; Vallazza, Jonathon M.; Zigler, Steven J.; Dewey, Michael R.

2002-01-01

Lake sturgeon Acipenser fluvescens, which are now protected from harvest, are considered rare in the upper Mississippi River and little information is available on the remaining populations. Transmitters were implanted into 31 lake sturgeon from two sites in the upper Mississippi River to describe their habitats and movement. The areas surrounding the tagging sites were core areas for both groups of lake sturgeon based on the high use (about 50% of locations by group) and frequent return to these areas by many of the tagged fish. Core areas contained sites with unique hydraulic characteristics, such that depositional substrates were common yet flow was present; these areas probably provide important feeding habitat for lake sturgeon. Minimal geographical overlap in range occurred between groups, suggesting that river reaches and associated core areas were unique to groups or substocks of fish. Lake sturgeon exhibited complex movement behaviors and had ranges of 3-198 km (median, 56 km) during the study. Tagged fish moved both downstream and upstream through upper Mississippi River navigation dams. However, dams appeared to be intermittent barriers to upstream passage because upstream passage events (10 fish, 19 passages) were fewer than downstream events (13 fish, 35 passages). Extensive use of the Wisconsin River by one group of lake sturgeon tagged in the upper Mississippi River has implications regarding management of a threatened population that transcends regulatory boundaries. Our study indicates that lake sturgeon In the upper Mississippi River system share many movement and habitat use characteristics with populations in other systems. However, significant data gaps preclude development of cogent management strategies, including information on population numbers and dynamics, identification of spawning areas, relations between groups, and assessment of the effects of commercial navigation.

Dam Removal Provides Fish Passage, Water Quality Benefits

EPA Pesticide Factsheets

The Bishopville Pond Dam in Maryland has been replaced with a series of pools, runs and step-like structures, improving water quality downstream and providing access for key fish species to spawn upstream.

Size selection from fishways and potential evolutionary responses in a threatened Atlantic salmon population

USGS Publications Warehouse

Maynard, George A.; Kinnison, M.T.; Zydlewski, Joseph D.

2017-01-01

The evolutionary effects of harvest on wild fish populations have been documented around the world; however, sublethal selective pressures can also cause evolutionary changes in phenotypes. For migratory fishes, passage facilities may represent instances of nonlethal selective pressure. Our analysis of 6 years of passage data suggests that certain fish passage facilities on the Penobscot River have been exerting selective pressure against large-bodied, anadromous Atlantic salmon (Salmo salar). At the second and third dams in the river, a 91-cm salmon was 21%–27% and 12%–16% less likely to pass than a 45-cm salmon, respectively. Fish size positively influences egg survival and number and is a heritable trait. Therefore, in a wild-reproducing population, exclusion of large fish from spawning areas may have population-level impacts. In the Penobscot River, most returning adults derive from a hatchery program that collects its broodstock after passing the first dam in the river. Analysis of fork lengths of salmon returning to the Penobscot River from 1978 to 2012 provided mixed support for evolution of size at maturity in different age classes in a pattern that may be expected from interactions with conservation hatchery operations. Additionally, slow-maturing and iteroparous individuals that represent the largest salmon size classes were essentially lost from the population during that time, and Penobscot River fish have shorter fork lengths at maturity than Atlantic salmon in undammed systems.

Biological Evaluations of an Off-Stream Channel, Horizontal Flat-Plate Fish Screen-The Farmers Screen

USGS Publications Warehouse

Mesa, Matthew G.; Rose, Brien P.; Copeland, Elizabeth S.

2010-01-01

Screens are commonly installed at water diversion sites to reduce entrainment of fish. Recently, the Farmers Irrigation District in Hood River, Oregon, developed a new flat-plate screen design that offers passive operation and may result in reduced operation and installation costs to irrigators. To evaluate the performance (its biological effect on fish) of this type of screen, two size classes of juvenile coho salmon (Oncorhynchus kistuch) were released over a small version of this screen in the field-the Herman Creek screen. The performance of the screen was evaluated over a range of inflow [0.02 to 0.42 m3/s (cubic meters per second)] and diversion flows (0.02 to 0.34 m3/s) at different weir wall heights. The mean approach velocities for the screen ranged from 0 to 5 cm/s (centimeters per second) and mean sweeping velocities ranged from 36 to 178 cm/s. Water depths over the screen surface ranged from 1 to 25 centimeters and were directly related to weir wall height and inflow. Passage of juvenile coho salmon over the screen under a variety of hydraulic conditions did not severely injure them or cause delayed mortality. For all fish, the mean percentage of body surface area that was injured after passage over the screen ranged from about 0.4 to 3.0%. This occurred even though many fish contacted the screen surface during passage. No fish were observed becoming impinged on the screen surface (greater than 1 second contact with the screen). When operated within its design criteria (diversion flows of about 0.28 m3/s), the screen provided safe and effective downstream passage of juvenile salmonids under a variety of hydraulic conditions. However, we do not recommend operating the screen at inflows less than 0.14 m3/s (5 ft3/s) because water depth can get quite shallow and the screen can completely dewater, particularly at very low flows.

hydropower biological evaluation tools

DOE Office of Scientific and Technical Information (OSTI.GOV)

This software is a set of analytical tools to evaluate the physical and biological performance of existing, refurbished, or newly installed conventional hydro-turbines nationwide where fish passage is a regulatory concern. The current version is based on information collected by the Sensor Fish. Future version will include other technologies. The tool set includes data acquisition, data processing, and biological response tools with applications to various turbine designs and other passage alternatives. The associated database is centralized, and can be accessed remotely. We have demonstrated its use for various applications including both turbines and spillways

A Markov chain analysis of the movements of juvenile salmonids in the forebay of McNary Dam, Washington and Oregon, 2006-09

USGS Publications Warehouse

Adams, Noah S.; Hatton, Tyson W.

2012-01-01

Passage and survival data for yearling and subyearling Chinook salmon and juvenile steelhead were collected at McNary Dam between 2006 and 2009. These data have provided critical information for resource managers to implement structural and operational changes designed to improve the survival of juvenile salmonids as they migrate past the dam. Much of the information collected at McNary Dam was in the form of three-dimensional tracks of fish movements in the forebay. These data depicted the behavior of multiple species (in three dimensions) during different diel periods, spill conditions, powerhouse operations, and test configurations of the surface bypass structures (temporary spillway weirs; TSWs). One of the challenges in reporting three-dimensional results is presenting the information in a manner that allows interested parties to summarize the behavior of many fish over many different conditions across multiple years. To accomplish this, we investigated the feasibility of using a Markov chain analysis to characterize fish movement patterns in the forebay of McNary Dam. The Markov chain analysis is one way that can be used to summarize numerically the behavior of fish in the forebay. Numerically summarizing the behavior of juvenile salmonids in the forebay of McNary Dam using the Markov chain analysis allowed us to confirm what had been previously summarized using visualization software. For example, proportions of yearling and subyearling Chinook salmon passing the three powerhouse areas was often greater in the southern and middle areas, compared to the northern area. The opposite generally was observed for steelhead. Results of this analysis also allowed us to confirm and quantify the extent of milling behavior that had been observed for steelhead. For fish that were first detected in the powerhouse region, less than 0.10 of the steelhead, on average, passed within each of the powerhouse areas. Instead, steelhead transitioned to adjoining areas in the spillway before passing the dam. In comparison, greater than 0.20 of the Chinook salmon passed within the powerhouse areas. Less milling behavior was observed for all species for fish that first approached the spillway. Compared to the powerhouse areas, a higher proportion of fish, regardless of species, passed the spillway areas and fewer transitioned to adjoining areas in the powerhouse. In addition to quantifying what had been previously speculated about the behavior of fish in the forebay of McNary Dam, the Markov chain analysis refined our understanding of how fish behavior and passage can be influenced by changes to the operations and structure of McNary Dam. For example, the addition of TSWs to the spillway area clearly influenced the passage of fish. Previous results have been reported showing that TSWs increased the number of fish passing through non-turbine routes and the fish-track videos indicated, in general, how fish behaved before passing through the TSWs. However, the analysis presented in this report allowed us to better understand how fish moved across the face of the dam before passing the TSWs and provided a way to quantify the effect of TSW location. Installation of the TSWs in bays 22 and 20 clearly increased passage proportions through the southern one-third of the spillway area for all species, most significantly for steelhead. When the TSWs were moved to bays 19 and 20 in 2008, overall passage through the southern one-third of the spillway remained higher than 2006, but decreased from what was observed in 2007. Shifting the TSWs to the north decreased the proportion of fish passing through the TSWs and increased the number of fish that moved to adjoining areas before passing the dam. Perhaps the most interesting new information to come out of the two-step Markov chain analysis relates to how the performance of the TSWs was influenced by their proximity to the powerhouse. During 2007, the highest proportion of fish passing through TSW22 was for fish that transitioned from the powerhouse area. In contrast, a relatively low proportion of fish passed through TSW20 after coming from the powerhouse area. Instead, the proportion of fish that passed TSW20 after coming from the northern part of the spillway was twice as high as the proportion of fish that passed through TSW20 after coming from the powerhouse. During 2008, the TSW in bay 22 was moved to bay 19, leaving the TSW in bay 20 as the one closest to the powerhouse. As was the case when a TSW was located in bay 22; the proportion of fish passing TSW20 after coming from the powerhouse was greater than the proportion of fish passing through TSW20 after coming from the northern part of the spillway. Passage proportions for fish passing through TSW19, the farthest north of the two TSWs during 2008, was higher for fish that came from the northern part of the spillway compared to the proportion of fish that passed through TSW19 after coming from the powerhouse. The Markov chain analysis provided a mathematical way to characterize fish behavior in the forebay of McNary Dam and helped refine our understanding of how fish movements were influenced by operational and structural changes at McNary Dam. The Markov chain analysis also could be used to examine how future structural and operational changes proposed for McNary Dam might influence the passage of juvenile salmonids.

A semi-automated method of monitoring dam passage of American Eels Anguilla rostrata

USGS Publications Warehouse

Welsh, Stuart A.; Aldinger, Joni L.

2014-01-01

Fish passage facilities at dams have become an important focus of fishery management in riverine systems. Given the personnel and travel costs associated with physical monitoring programs, automated or semi-automated systems are an attractive alternative for monitoring fish passage facilities. We designed and tested a semi-automated system for eel ladder monitoring at Millville Dam on the lower Shenandoah River, West Virginia. A motion-activated eel ladder camera (ELC) photographed each yellow-phase American Eel Anguilla rostrata that passed through the ladder. Digital images (with date and time stamps) of American Eels allowed for total daily counts and measurements of eel TL using photogrammetric methods with digital imaging software. We compared physical counts of American Eels with camera-based counts; TLs obtained with a measuring board were compared with TLs derived from photogrammetric methods. Data from the ELC were consistent with data obtained by physical methods, thus supporting the semi-automated camera system as a viable option for monitoring American Eel passage. Time stamps on digital images allowed for the documentation of eel passage time—data that were not obtainable from physical monitoring efforts. The ELC has application to eel ladder facilities but can also be used to monitor dam passage of other taxa, such as crayfishes, lampreys, and water snakes.

Sluiceway Operations for Adult Steelhead Downstream Passage at The Dalles Dam, Columbia River, USA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khan, Fenton; Royer, Ida M.; Johnson, Gary E.

2013-10-01

This study evaluated adult steelhead (Oncorhynchus mykiss; fallbacks and kelts) downstream passage at The Dalles Dam in the Columbia River, USA, during the late fall, winter, and early spring months between 2008 and 2011. The purpose of the study was to determine the efficacy of operating the dam’s ice-and-trash sluiceway during non-spill months to provide a relatively safe, non-turbine, surface outlet for overwintering steelhead fallbacks and downstream migrating steelhead kelts. We applied the fixed-location hydroacoustic technique to estimate fish passage rates at the sluiceway and turbines of the dam. The spillway was closed during our sampling periods, which generally occurredmore » in late fall, winter, and early spring. The sluiceway was highly used by adult steelhead (91–99% of total fish sampled passing the dam) during all sampling periods. Turbine passage was low when the sluiceway was not operated. This implies that lack of a sluiceway route did not result in increased turbine passage. However, when the sluiceway was open, adult steelhead used it to pass through the dam. The sluiceway may be operated during late fall, winter, and early spring to provide an optimal, non-turbine route for adult steelhead (fallbacks and kelts) downstream passage at The Dalles Dam.« less

Assessment of smolt condition for travel time analysis. Annual report 1988

USGS Publications Warehouse

Rondorf, D.W.; Beeman, J.W.; Faler, J.C.; Free, M.E.; Wagner, E.J.

1989-01-01

Estimates of migration rates and travel times of juvenile salmonids within index reaches of the Columbia River basin are collected through the Smolt Monitoring Program for use by the Fish Passage Center. With increased reliance upon travel time estimates in 1988 by the Fish Passage Center, this study was implemented to monitor the biological attributes of juvenile chinook salmon Oncorhynchus tshawytscha and steelhead trout 0.- mykiss used for the travel time estimates, The physiological ability of fish to respond to stress was assessed by measuring levels of plasma cortisol, glucose, and chloride before and after a stress-challenge test. Most mid-Columbia and Snake river groups responded normally to the stress challenge exhibiting an increase in plasma glucose and cortisol and a slight decrease in chloride. Fish trucked to release sites were more stressed than those released directly from the hatchery, but most still responded to the stress challenge test normally. An abnormal or extreme stress response occurred when there were deviations from preferred protocol, disease problems at hatcheries, or when fish were trucked over long periods (7h). The development of smoltification was evaluated by measuring gill Na+K+-ATPase, plasma thyroxine, purines, and body morphology. Most groups were similar at the hatcheries but differed as the migration to McNary Dam proceeded. Gill ATPase activity increased 2-3 fold during the first 20 days of migration, after which it changed little. Fish with longer in-river travel times appeared to be more smolted than those which were in the river for a shorter period of time. The prevalence of bacterial kidney disease (BKD) in spring chinook salmon was evaluated using the enzyme linked immunosorbent assay (ELISA) and fluorescent antibody technique (FAT). Prevalence of BKD in groups tested using the ELISA method was as high as 99% at some downstream locations. A review of indices is presented as a guide, to the development of an index of smolt condition and preliminary data are presented. An index could be used as a tool to synthesize information on fish condition to assist with management and evaluation of the Water Budget.

Does boat traffic cause displacement of fish in estuaries?

PubMed

Becker, Alistair; Whitfield, Alan K; Cowley, Paul D; Järnegren, Johanna; Næsje, Tor F

2013-10-15

Estuaries are increasingly under threat from a variety of human impacts. Recreational and commercial boat traffic in urban areas may represent a significant disturbance to fish populations and have particularly adverse effects in spatially restricted systems such as estuaries. We examined the effects of passing boats on the abundance of different sized fish within the main navigation channel of an estuary using high resolution sonar (DIDSON). Both the smallest (100-300 mm) and largest (>501 mm) size classes had no change in their abundance following the passage of boats. However, a decrease in abundance of mid-sized fish (301-500 mm) occurred following the passage of boats. This displacement may be attributed to a number of factors including noise, bubbles and the rapidly approaching object of the boat itself. In highly urbanised estuarine systems, regular displacement by boat traffic has the potential to have major negative population level effects on fish assemblages. Copyright © 2013 Elsevier Ltd. All rights reserved.

Model study of St. Stephen powerhouse fish passage facilities, Cooper River rediversion project, South Carolina. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hite, J.E.; Murphy, T.E.

1998-09-01

This report documents a model study of the St. Stephen Power Plant, located in Berkely County, South Carolina. A previous model study revealed that the fish lift at the powerhouse could be improved by providing auxiliary attraction flows to the fish entrances. An auxiliary attraction flow (AAF) system was proposed that uses a siphon to obtain the auxiliary attraction water from the reservoir. The model investigations reported herein address the flow conditions at the discharge end of the siphon; the hydraulic aspects of the siphon are not addressed. Three different models were used to evaluate flow conditions at the dischargemore » end of the AAF system. A 1:25-scale model of the St. Stephen powerhouse was used to improve the fish entrance conditions and to evaluate the outlet conditions for the initial AAF system. As the investigations progressed, the design of the siphon discharge system was modified to include downstream fish migration and debris passage.« less

Sprint swimming performance of wild bull trout (Salvelinus confluentus)

USGS Publications Warehouse

Mesa, M.G.; Phelps, J.; Weiland, L.K.

2008-01-01

We conducted laboratory experiments to determine the sprint swimming performance of wild juvenile and adult bull trout Salvelinus confluentus. Sprint swimming speeds were estimated using high-speed digital video analysis. Thirty two bull trout were tested in sizes ranging from about 10 to 31 cm. Of these, 14 fish showed at least one motivated, vigorous sprint. When plotted as a function of time, velocity of fish increased rapidly with the relation linear or slightly curvilinear. Their maximum velocity, or Vmax, ranged from 1.3 to 2.3 m/s, was usually achieved within 0.8 to 1.0 s, and was independent of fish size. Distances covered during these sprints ranged from 1.4 to 2.4 m. Our estimates of the sprint swimming performance are the first reported for this species and may be useful for producing or modifying fish passage structures that allow safe and effective passage of fish without overly exhausting them. ?? 2008 by the Northwest Scientific Association. All rights reserved.

Barotrauma em peixes em usinas hidrelétricas: ferramentas para o estudo

DOE Office of Scientific and Technical Information (OSTI.GOV)

Do Vale Beirao, Bernardo; Castelo Branco Marciano, Natlia; de Souza Dias, Luma

2015-09-30

The main source of electric power generation in Brazil comes from hydropower plants, nevertheless, the installed power is expected to raise 56.8%, reaching a total of 116,000 MW at the year 2020. The increase at the hydroelectric sector will be responsible for a series of fish community impacts. One of the impacts over the fish community is related to fish kills due to downstream passage through turbines or fish entrance at the draft tube from the tailrace. Usually when there is a maneuver and the turbine stops, fish get attracted and enter the draft tube and, just as the downstreammore » passage through a turbine, when the turbine starts, a rapid decompression occurs and can cause barotrauma. When such events happen, according to Boyle’s law (P1V1=P2V2), swim bladder volume expands at the same rate that the pressure decreases, which can lead to the organ’s rupture.« less

Evaluation of Lower Umatilla River Channel Modifications Below Three Mile Dam, 1984 Annual Progress Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nigro, Anthony A.; Ward, David L.

1985-05-01

This report summarizes results of the first year of a study initiated in September 1984 to evaluate the adequacy of channel modifications made in the lower Umatilla River to improve adult anadromous salmonid passage to Three Mile Dam (RKm 5.6), determine if fish passage or delay problems exist at Three Mile Dam and recommend site specific corrective measures if needed. Movements of steelhead (Salmo gairdneri) were monitored using mark and recapture and radio telemetry techniques. Thirty-four steelhead were marked with T-anchor tags and released in the lower river. Fifteen of those marked were also fitted with radio transmitters. Three radiotaggedmore » steelhead migrated through channel modifications to Three Mile Dam. Two of these fish migrated to the dam in less than 26 hours, but held just below the dam for 7 and 10 days before entering the ladders. The third steelhead delayed for 30 days and entered the west ladder within 24 hours of arrival at the dam. Two other radiotagged steelhead moved upstream through some of the channel modifications but did not migrate to the dam. Only one of 19 marked steelhead not fitted with transmitters was recovered at Three Mile Dam. 14 refs., 18 figs., 3 tabs.« less

American Recovery and Reinvestment Act: North Fork Skokomish Powerhouse at Cushman No. 2 Dam

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fischer, Steve; McCarty, Patrick

2013-09-30

The objective of this project was to add generating capacity on an in-stream flow release at Tacoma Power's Cushman hydroelectric project, Cushman No. 2 Dam, FERC Project P-460. The flow that is being used to generate additional electricity was being discharged from a valve at the base of the dam without recovery of the energy. A second objective to the project was to incorporate upstream fish passage by use of a fish collection structure attached to the draft tubes of the hydroelectric units. This will enable reintroduction of native anadromous fish above the dams which have blocked fish passage sincemore » the late 1920's. The project was funded in part by the American Recovery and Reinvestment Act through the Department of Energy, Office of Energy, Efficiency and Renewable Energy, Wind and Water Power Program.« less

Performance of a surface bypass structure to enhance juvenile steelhead passage and survival at Lower Granite Dam, Washington

USGS Publications Warehouse

Adams, Noah S.; Plumb, John M.; Perry, Russell W.; Rondorf, Dennis W.

2014-01-01

An integral part of efforts to recover stocks of Pacific salmon Oncorhynchus spp. and steelhead O. mykiss in Pacific Northwest rivers is to increase passage efficacy and survival of juveniles past hydroelectric dams. As part of this effort, we evaluated the efficacy of a prototype surface bypass structure, the removable spillway weir (RSW), installed in a spillbay at Lower Granite Dam, Washington, on the Snake River during 2002, 2003, 2005, and 2006. Radio-tagged juvenile steelhead were released upstream from the dam and their route of passage through the turbines, juvenile bypass, spillway, or RSW was recorded. The RSW was operated in an on-or-off condition and passed 3–13% of the total discharge at the dam when it was on. Poisson rate models were fit to the passage counts of hatchery- and natural-origin juvenile steelhead to predict the probability of fish passing the dam. Main-effect predictor variables were RSW operation, diel period, day of the year, proportion of flow passed by the spillway, and total discharge at the dam. The combined fish passage through the RSW and spillway was 55–85% during the day and 37–61% during the night. The proportion of steelhead passing through nonturbine routes was <88% when the RSW was off during the day and increased to >95% when the RSW was on during the day. The ratio of the proportion of steelhead passed to the proportion of water passing the RSW was from 6.3:1 to 10.0:1 during the day and from 2.7:1 to 5.2:1 during the night. Steelhead passing through the RSW exited the tailrace about 15 min faster than fish passing through the spillway. Mark–recapture single-release survival estimates for steelhead passing the RSW ranged from 0.95 to 1.00. The RSW appeared to be an effective bypass structure compared with other routes of fish passage at the dam.

76 FR 71008 - Yuba County Water Agency; Notice of Dispute Resolution Process Schedule; Panel Meeting, and...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-16

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Project No. 2246-058] Yuba County Water..., in the relicensing proceeding for the Yuba County Water Agency's (YCWA) Yuba River Hydroelectric... related activities on: (1) Fish passage for anadromous fish; (2) hydrology for anadromous fish; (3) water...

Supplement Analysis for the Watershed Management Program Final EIS (DOE EIS /SA-156) - Upper Salmon River Anadromous Fish Passage Improvement Projects

DOE Office of Scientific and Technical Information (OSTI.GOV)

Keller, Carl J.

2004-07-13

BPA proposes to fund IDFG to plan and complete construction of fish passage improvements and water conservation activities that are contained within IDFG’s Statement of Work (SOW) for the period 7/1/04 to 6/30/05. The funding request contained in their SOW is part of an ongoing IDFG effort to fund anadromous fish passage projects that fall outside the scope of the Mitchell Act. The proposed SOW activities fall within the following four categories: Phase I-Planning and Design (gather data, perform investigations, and exchange information; perform surveys and assessments to be compliant; survey project sites and perform engineering designs; perform contract andmore » project management); Phase II-Construction and Implementation (procure materials and supplies, prepare contracts and solicit bids, plant native seedlings, complete capital improvements); Phase III-Operation and Maintenance (maintain office operations); and Phase IV- Monitoring and Evaluation (monitor and evaluate post-project effects, reporting). The SOW culminates with proposed construction of 18 capital improvement projects (Table 1 attached). The types of capital improvements include: screening gravity water diversions; consolidating and/or eliminating ditches; evaluating and screening pump diversions; evaluating and implementing water conservation activities; constructing screens along migration routes and rearing areas for hatchery and wild salmon; improving upstream and downstream passage for anadromous fish; and maximize benefits to aquatic habitat. Because each of the proposed projects in the SOW is still in the planning stages, the specifics of each still need to be completed.« less

Walla Walla River Basin Fish Screen Evaluations; Nursery Bridge Fishway, Garden City/Lowden II, and Little Walla Walla Sites, 2004 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vucelick, J.; McMichael, G.

2004-11-01

Pacific Northwest National Laboratory evaluated the fish screens at the Nursery Bridge Fishway, the Garden City/Lowden II site west of Walla Walla, Washington, and the Little Walla Walla site in Milton-Freewater, Oregon, in the Walla Walla River Basin during 2004. The fish-screen facilities were examined to determine if they were being effectively operated and maintained to provide for safe fish passage. At the Nursery Bridge Fishway, the screens were evaluated specifically to determine whether the louvers that aid in controlling water flow from behind the screens could be adjusted so that the screens would meet fish-protection criteria. Data were collectedmore » to determine whether velocities in front of the screens met current National Oceanic and Atmospheric Administration's National Marine Fisheries Service (NOAA Fisheries) (formerly NMFS) criteria to promote safe and timely fish passage before and after changing the louver settings. The Little Walla Walla screens were evaluated to determine how a build-up of algae on the screens affected water velocities.« less

Pathways of Barotrauma in Juvenile Salmonids Exposed to Simulated Hydroturbine Passage: Boyle’s Law vs. Henry’s Law

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Pflugrath, Brett D.; Colotelo, Alison HA

2012-06-01

On their seaward migration, juvenile salmonids commonly pass hydroelectric dams. Fish passing by the turbine blade may experience rapid decompression, the severity of which can be highly variable and may result in a number of barotraumas. The mechanisms of these injuries can be due to expansion of existing bubbles or gases coming out of solution; governed by Boyle’s Law and Henry’s Law, respectively. This paper combines re-analysis of published data with new experiments to gain a better understanding of the mechanisms of injury and mortality for fish experiencing rapid decompression associated with hydroturbine passage. From these data it appears thatmore » the majority of decompression related injuries are due to the expansion of existing bubbles in the fish, particularly the expansion and rupture of the swim bladder. This information is particularly useful for fisheries managers and turbine manufacturers, demonstrating that reducing the rate of swim bladder ruptures by reducing the frequency of occurrence and severity of rapid decompression during hydroturbine passage could reduce the rates of injury and mortality for hydroturbine passed juvenile salmonids.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Faber, Derrek M.; Ploskey, Gene R.; Weiland, Mark A.

Pacific Northwest National Laboratory (PNNL) conducted an acoustic-telemetry study at Bonneville Dam in 2009 to evaluate the effects of a behavioral guidance structure (BGS) in the Bonneville Dam second powerhouse forebay on fish passage and survival through the second powerhouse (B2), the dam as a whole, and through the first powerhouse and spillway combined. The BGS was deployed to increase the survival of fish passing through B2 by increasing the percentage of outmigrating smolts entering the B2 Corner Collector (B2CC)—a surface flow outlet known to be a relatively benign route for downstream passage at this dam. The study relied onmore » releases of live Juvenile Salmon Acoustic Telemetry System tagged smolts in the Columbia River and used acoustic telemetry to evaluate the approach, passage, and survival of passing juvenile salmon. Study results indicated that having turbine 11 in service is important for providing flow conditions that are comparable to those observed in pre-BGS years (2004 and 2005) and in 2008. This study supports the U.S. Army Corps of Engineers continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.« less

Culvert roughness elements for native Utah fish passage : phase I.

DOT National Transportation Integrated Search

2011-01-01

Laboratory flume testing of native Utah non-salmonid fish was performed to observe how : they use altered flow around obstacles to swim upstream. Three experimental setups included : a bare Plexiglas flume, vertical cylinders, and natural substrate p...

Compliance Monitoring of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, 2012

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam

The purpose of this compliance study was to estimate dam passage survival of yearling and subyearling Chinook salmon and steelhead smolts at John Day Dam during the spring and summer outmigrations in 2012. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 for spring migrants and greater than or equal to 0.93 for summer migrants, estimated with a standard error (SE) less than or equal to 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailracemore » 3 km downstream of the dam, as well as the forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), as required in the Columbia Basin Fish Accords (Fish Accords). A virtual/paired-release design was used to estimate dam passage survival at John Day Dam. The approach included releases of smolts, tagged with acoustic micro-transmitters, above John Day Dam that contributed to the formation of a virtual release at the face of John Day Dam. A survival estimate from this release was adjusted by a paired release below John Day Dam. A total of 3376 yearling Chinook salmon, 5726 subyearling Chinook salmon, and 3239 steelhead smolts were used in the virtual releases. Sample sizes for the below-dam paired releases (R2 and R3, respectively) were 997 and 995 for yearling Chinook salmon smolts, 986 and 983 for subyearling Chinook salmon smolts, and 1000 and 1000 for steelhead smolts. The Juvenile Salmon Acoustic Telemetry System (JSATS) tags were manufactured by Advanced Telemetry Systems. Model SS300 tags, weighing 0.304 g in air, were surgically implanted in yearling and subyearling Chinook salmon, and Model SS130 tag, weighing 0.438 g in air, were surgically implanted in juvenile steelhead for this investigation. The intent of the spring study was to estimate dam passage survival during both 30% and 40% spill conditions. The two spill conditions were to be systematically performed in alternating 2-day test intervals over the course of the spring outmigration. High flow conditions in 2012 interrupted the spill study. Dam passage survival was therefore estimated season-wide regardless of spill conditions.« less

Fish-Friendly Hydropower Turbine Development & Deployment: Alden Turbine Preliminary Engineering and Model Testing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Foust, J.; Hecker, G.; Li, S.

2011-10-01

The Alden turbine was developed through the U.S. Department of Energy's (DOE's) former Advanced Hydro Turbine Systems Program (1994-2006) and, more recently, through the Electric Power Research Institute (EPRI) and the DOE's Wind & Water Power Program. The primary goal of the engineering study described here was to provide a commercially competitive turbine design that would yield fish passage survival rates comparable to or better than the survival rates of bypassing or spilling flow. Although the turbine design was performed for site conditions corresponding to 92 ft (28 m) net head and a discharge of 1500 cfs (42.5 cms), themore » design can be modified for additional sites with differing operating conditions. During the turbine development, design modifications were identified for the spiral case, distributor (stay vanes and wicket gates), runner, and draft tube to improve turbine performance while maintaining features for high fish passage survival. Computational results for pressure change rates and shear within the runner passage were similar in the original and final turbine geometries, while predicted minimum pressures were higher for the final turbine. The final turbine geometry and resulting flow environments are expected to further enhance the fish passage characteristics of the turbine. Computational results for the final design were shown to improve turbine efficiencies by over 6% at the selected operating condition when compared to the original concept. Prior to the release of the hydraulic components for model fabrication, finite element analysis calculations were conducted for the stay vanes, wicket gates, and runner to verify that structural design criteria for stress and deflections were met. A physical model of the turbine was manufactured and tested with data collected for power and efficiency, cavitation limits, runaway speed, axial and radial thrust, pressure pulsations, and wicket gate torque. All parameters were observed to fall within ranges expected for conventional radial flow machines. Based on these measurements, the expected efficiency peak for prototype application is 93.64%. These data were used in the final sizing of the supporting mechanical and balance of plant equipment. The preliminary equipment cost for the design specification is $1450/kW with a total supply schedule of 28 months. This equipment supply includes turbine, generator, unit controls, limited balance of plant equipment, field installation, and commissioning. Based on the selected head and flow design conditions, fish passage survival through the final turbine is estimated to be approximately 98% for 7.9-inch (200-mm) fish, and the predicted survival reaches 100% for fish 3.9 inches (100 mm) and less in length. Note that fish up to 7.9- inches (200 mm) in length make up more than 90% of fish entrained at hydro projects in the United States. Completion of these efforts provides a mechanical and electrical design that can be readily adapted to site-specific conditions with additional engineering development comparable to costs associated with conventional turbine designs.« less

Predation by Resident Fish on Juvenile Salmonids in John Day Reservoir: Final Report, 1983-1986: Volume 1, Final Report of Research.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Poe, Thomas P.; Rieman, Bruce E.

1988-07-01

In 1982 the NPPC included in its Fish and Wildlife Program a measure that called for studies ''... to investigate juvenile salmon and steelhead losses to predators while these fish are migrating through Columbia and Snake River reservoirs.'' In the same year the Bonneville Power Administration (BPA) funded ODFW and FWS to conduct collaborative studies to estimate the number of juvenile salmonids lost to predators in John Day Reservoir. Also included as study objectives were: (1) a description of the importance of predation losses relative to mortality at the dam and total reservoir mortality; (2) a description of how predationmore » losses might vary (spatially and temporally); and (3) recommendations of measures to control predation on smolts. We studied four species of predator: northern squawfish, walleye, smallmouth bass, and channel catfish. We selected John Day Reservoir as the study site because the following factors led us to believe if predation was a problem in any reservoir, it would be most obvious there because: (1) the reservoir is an important subyearling chinook rearing area; (2) passage and residualism of juvenile salmonids were considered a problem there; and (3) substantial populations of predators were known to reside in the reservoir. Individual reports were processed separately for the data base.« less

Application of a multistate model to estimate culvert effects on movement of small fishes

USGS Publications Warehouse

Norman, J.R.; Hagler, M.M.; Freeman, Mary C.; Freeman, B.J.

2009-01-01

While it is widely acknowledged that culverted road-stream crossings may impede fish passage, effects of culverts on movement of nongame and small-bodied fishes have not been extensively studied and studies generally have not accounted for spatial variation in capture probabilities. We estimated probabilities for upstream and downstream movement of small (30-120 mm standard length) benthic and water column fishes across stream reaches with and without culverts at four road-stream crossings over a 4-6-week period. Movement and reach-specific capture probabilities were estimated using multistate capture-recapture models. Although none of the culverts were complete barriers to passage, only a bottomless-box culvert appeared to permit unrestricted upstream and downstream movements by benthic fishes based on model estimates of movement probabilities. At two box culverts that were perched above the water surface at base flow, observed movements were limited to water column fishes and to intervals when runoff from storm events raised water levels above the perched level. Only a single fish was observed to move through a partially embedded pipe culvert. Estimates for probabilities of movement over distances equal to at least the length of one culvert were low (e.g., generally ???0.03, estimated for 1-2-week intervals) and had wide 95% confidence intervals as a consequence of few observed movements to nonadjacent reaches. Estimates of capture probabilities varied among reaches by a factor of 2 to over 10, illustrating the importance of accounting for spatially variable capture rates when estimating movement probabilities with capture-recapture data. Longer-term studies are needed to evaluate temporal variability in stream fish passage at culverts (e.g., in relation to streamflow variability) and to thereby better quantify the degree of population fragmentation caused by road-stream crossings with culverts. ?? American Fisheries Society 2009.

Field-based evaluations of horizontal flat-plate fish screens

USGS Publications Warehouse

Rose, B.P.; Mesa, M.G.; Barbin-Zydlewski, G.

2008-01-01

Diversions from streams are often screened to prevent the loss of or injury to fish. Hydraulic criteria meant to protect fish that encounter screens have been developed, but primarily for screens that are vertical to the water flow rather than horizontal. For this reason, we measured selected hydraulic variables and released wild rainbow trout Oncorhynchus mykiss over two types of horizontal flat-plate fish screens in the field. Our goal was to assess the efficacy of these screens under a variety of conditions in the field and provide information that could be used to develop criteria for safe fish passage. We evaluated three different invertedweir screens over a range of stream (0.24-1.77 m3/s) and diversion flows (0.10-0.31 m3/s). Approach velocities (AVs) ranged from 3 to 8 cm/s and sweeping velocities (SVs) from 69 to 143 cm/s. We also evaluated a simple backwatered screen over stream flows of 0.23-0.79 m3/s and diversion flows of 0.08-0.32 m3/s. The mean SVs for this screen ranged from 15 to 66 cm/s and the mean AVs from 1 to 5 cm/s. The survival rates of fish held for 24 h after passage over these screens exceeded 98%. Overall, the number of fish-screen contacts was low and the injuries related to passage were infrequent and consisted primarily of minor fin injuries. Our results indicate that screens of this type have great potential as safe and effective fish screens for small diversions. Care must be taken, however, to avoid operating conditions that produce shallow or no water over the screen surface, situations of high AVs and low SVs at backwatered screens, and situations producing a localized high AV with spiraling flow. ?? Copyright by the American Fisheries Society 2008.

Design and implementation of a new autonomous sensor fish to support advanced hydropower development.

PubMed

Deng, Z D; Lu, J; Myjak, M J; Martinez, J J; Tian, C; Morris, S J; Carlson, T J; Zhou, D; Hou, H

2014-11-01

Acceleration in development of additional conventional hydropower requires tools and methods to perform laboratory and in-field validation of turbine performance and fish passage claims. The new-generation Sensor Fish has been developed with more capabilities to accommodate a wider range of users over a broader range of turbine designs and operating environments. It provides in situ measurements of three-dimensional (3D) linear accelerations, 3D rotational velocities, 3D orientation, pressure, and temperature at a sampling frequency of 2048 Hz. It also has an automatic floatation system and built-in radio-frequency transmitter for recovery. The relative errors of the pressure, acceleration, and rotational velocity were within ±2%, ±5%, and ±5%, respectively. The accuracy of orientation was within ±4° and accuracy of temperature was ±2 °C. The new-generation Sensor Fish is becoming a major technology and being deployed for evaluating the conditions for fish passage of turbines or other hydraulic structures in both the United States and several other countries.

High fluid shear strain causes injury in silver shark: Preliminary implications for Mekong hydropower turbine design

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baumgartner, L. J.; Thorncraft, G.; Phonekhampheng, O.

Fluid shear arises when two bodies of water, travelling at different velocities, intersect. Fish entrained at the interface of these two water masses will experience shear stress; which can be harmful. The stress magnitude is dependent on waterbody mass and velocity; with the fish impact largely related to body size. Elevated shear stress occurs where rapidly flowing water passes near spillways, across screens, within turbine draft tubes or other passage routes. A flume was used to determine critical tolerances of silver shark (Balantiocheilos melanopterus) to different shear stress rates generated by a high velocity jet. Fish experienced higher levels ofmore » injury and mortality as shear stress was increased. Excessive shear forces had damaging impacts on fish. Mortality occurred at shear levels higher that 600/s. It is important that developers should attempt to model potential shear profiles expected during turbine passage in selected designs. These data will be critical to determine potential impacts on fish. If the likelihood of adverse impact is high, then alternative designs which have lower shear stress could be explored.« less

The Influence of Tag Presence on the Mortality of Juvenile Chinook Salmon Exposed to Simulated Hydroturbine Passage: Implications for Survival Estimates and Management of Hydroelectric Facilities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlson, Thomas J.; Brown, Richard S.; Stephenson, John R.

Each year, millions of fish have telemetry tags (acoustic, radio, inductive) surgically implanted to assess their passage and survival through hydropower facilities. One route of passage of particular concern is through hydro turbines, in which fish may be exposed to a range of potential injuries, including barotraumas from rapid decompression. The change in pressure from acclimation to exposure (nadir) has been found to be an important factor in predicting the likelihood of mortality and injury for juvenile Chinook salmon undergoing rapid decompression associated with simulated turbine passage. The presence of telemetry tags has also been shown to influence the likelihoodmore » of injury and mortality for juvenile Chinook salmon. This research investigated the likelihood of mortality and injury for juvenile Chinook salmon carrying telemetry tags and exposed to a range of simulated turbine passage. Several factors were examined as predictors of mortal injury for fish undergoing rapid decompression, and the ratio of pressure change and tag burden were determined to be the most predictive factors. As the ratio of pressure change and tag burden increase, the likelihood of mortal injury also increases. The results of this study suggest that previous survival estimates of juvenile Chinook salmon passing through hydro turbines may have been biased due to the presence of telemetry tags, and this has direct implications to the management of hydroelectric facilities. Realistic examples indicate how the bias in turbine passage survival estimates could be 20% or higher, depending on the mass of the implanted tags and the ratio of acclimation to exposure pressures. Bias would increase as the tag burden and pressure ratio increase, and have direct implications on survival estimates. It is recommended that future survival studies use the smallest telemetry tags possible to minimize the potential bias that may be associated with carrying the tag.« less

Quantifying the combined effects of attempt rate and swimming capacity on passage through velocity barriers

USGS Publications Warehouse

Castro-Santos, T.

2004-01-01

The ability of fish to migrate past velocity barriers results from both attempt rate and swimming capacity. Here, I formalize this relationship, providing equations for estimating the proportion of a population successfully passing a barrier over a range of distances and times. These equations take into account the cumulative effect of multiple attempts, the time required to stage those attempts, and both the distance traversed on each attempt and its variability. I apply these equations to models of white sucker (Catostomus commersoni) and walleye (Stizostedion vitreum) ascending a 23-m-long flume against flows ranging from 1.5 to 4.5 m??s-1. Attempt rate varied between species, attempts, and over time and was influenced by hydraulic variables (velocity of flow and discharge). Distance of ascent was primarily influenced by flow velocity. Although swimming capacity was similar, white sucker had greater attempt rates, and consequently better passage success, than walleye. Over short distances, models for both species predict greater passage success against higher velocities owing to the associated increased attempt rate. These results highlight the importance of attraction to fish passage and the need for further investigation into the hydraulic and other environmental conditions required to simultaneously optimize both attempt rate and passage success.

Food Prejudices and Survival

DTIC Science & Technology

1955-05-01

are the beet part of the fish. He no longer desired variety in the cooking, becsoe fond of row fish, and liked fermented whale oil. Later, he...expedition in 1845 to search for the Northwest passage, he took along a three-year supply of lime juice, vinegar , fresh carrots, onions, cranberries

Assemblages of micronektonic fishes and invertebrates in a gradient of regional warming along the Western Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Parker, Melanie L.; Fraser, William R.; Ashford, Julian; Patarnello, Tomaso; Zane, Lorenzo; Torres, Joseph J.

2015-12-01

Micronektonic fishes and invertebrates were sampled with 32 midwater trawls at nine sites along the Western Antarctic Peninsula (WAP) in the austral fall (March-April) of 2010. Study sites were located within four hypothesized hydrographic regions: near Joinville Island in Region I, at Croker Passage, near Anvers Island, and near Renaud Island in Region II, within Marguerite Bay and the Marguerite Trough in Region III, and near Charcot Island in Region IV. A total of 62 taxa representing 12 taxonomic groups of pelagic invertebrates and 9 families of fish were captured, but assemblages were dominated by only a few species. The most numerically abundant taxa were the euphausiids, Thysanoessa macrura, Euphausia superba, and E. crystallorophias, combining to contribute nearly 79% of the total catch. Biomass dominants included E. superba, which contributed more than 44% of the total catch, the notothenioid Pleuragramma antarctica, and the salp, Salpa thompsoni. A comparison of total catches among sites revealed that the largest volumetric abundances and biomasses were captured at the Marguerite Bay site. Cluster analysis of abundance data identified distinct multispecies assemblages at Joinville Island in Region I, Croker Passage in Region II, Marguerite Bay in Region III, and Charcot Island in Region IV. A fifth distinct assemblage included samples from sites near Anvers and Renaud Island in Region II, and from the Marguerite Trough in Region III. Assemblages at Joinville Island and Croker Passage were both dominated by E. superba and S. thompsoni, but hydrographic conditions at Joinville Island favored a neritic assemblage, underscored by substantial numbers of P. antarctica. The assemblage at Croker Passage was more oceanic in nature with major inputs from the myctophid, Electrona antarctica and the hyperiid amphipod, Themisto gaudichaudii. Marguerite Bay and Charcot Island were well-mixed assemblages with strong representation by both neritic and oceanic fauna. The mid-peninsula assemblage was oceanic in character, being overwhelmingly dominated by Thysanoessa macrura and T. gaudichaudii. Pleuragramma antarctica were captured at five sites: Joinville Island, Croker Passage, Marguerite Bay, and the two sites near Charcot Island. They were completely absent at the two sites near Anvers Island, at Renaud Island, and in the Marguerite Trough. One fish was captured in Croker Passage. The majority of fish captured in Marguerite Bay were larger than 150 mm standard length (SL), with very few fish of smaller size present. If resident populations of Pleuragramma reproduce and recruit locally rather than being sustained by larval advection, those populations will be highly susceptible to local disappearance. This may be the causative factor behind the absence of Pleuragramma from the mid-peninsula region. Continued warming and subsequent sea ice reductions may not only cause Pleuragramma population collapses in the Marguerite Bay and Charcot Island regions, but may also change the character of the faunal assemblages along the WAP to those of an oceanic system.

Sonic boom effect on fish: Observations

NASA Technical Reports Server (NTRS)

Wilkins, M. E.

1972-01-01

Motion pictures of fish in a small tank at the time a bullet traveling 1200 m/sec passes a few centimeters above indicate that fish sense the passage of the shock wave but suffer no ill effects. The pressure rise at the bow shock wave was 0.26 atm or 275 times that associated with a strong sonic boom, for example, from the proposed supersonic transport.

76 FR 5782 - Submission for OMB Review; Comment Request

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-02

... currently approved information collection. The Cooperative Game Fish Tagging Program (CGFTP) was initiated in 1954 by Woods Hole Oceanographic Institution (WHOI). In 1973 the CGFTP became a cooperative effort... resulting from passage of the Migratory Game Fish Study Act of 1959 (Pub. L. 86- 359) and other legislative...

Effects of passage barriers on demographics and stability properties of a virtual trout populations

Treesearch

Bret Harvey; Steven Railsback

2011-01-01

Habitat fragmentation is widely assumed to have negative effects on populations and communities, but some effects of fragmentation are subtle, difficult to measure and not always negative. For stream fish, barriers to upstream passage, such as waterfalls or culverts with perched outlets, are a common cause of fragmentation. We explored the effects of barriers on a...

Assessing Juvenile Salmonid Passage Through Culverts: Field Research in Support of Protocol Development

DOE Office of Scientific and Technical Information (OSTI.GOV)

Williams, Greg D.; Evans, Nathan R.; Pearson, Walter H.

2001-10-30

The primary goal of our research this spring/ summer was to refine techniques and examine scenarios under which a standardized protocol could be applied to assess juvenile coho salmon (O. kisutch) passage through road culverts. Field evaluations focused on capture-mark- recapture methods that allowed analysis of fish movement patterns, estimates of culvert passability, and potential identification of cues inducing these movements. At this stage, 0+ age coho salmon fry 30 mm to 65 mm long (fork length) were the species and age class of interest. Ultimately, the protocol will provide rapid, statistically rigorous methods for trained personnel to perform standardizedmore » biological assessments of culvert passability to a number of juvenile salmon species. Questions to be addressed by the research include the following: ? Do hydraulic structures such as culverts restrict habitat for juvenile salmonids? ? How do existing culverts and retrofits perform relative to juvenile salmonid passage? ? Do some culvert characteristics and hydraulic conditions provide better passage than others? ? Does the culvert represent a barrier to certain size classes of fish? Recommendations addressed issues of study site selection, initial capture, marking, recapture/observations, and estimating movement.« less

Approach, passage, and survival of juvenile salmonids at Little Goose Dam, Washington: Post-construction evaluation of a temporary spillway weir, 2009

USGS Publications Warehouse

Beeman, J.W.; Braatz, A.C.; Hansel, H.C.; Fielding, S.D.; Haner, P.V.; Hansen, G.S.; Shurtleff, D.J.; Sprando, J.M.; Rondorf, D.W.

2010-01-01

This report describes a study of dam passage and survival of radio-tagged juvenile salmonids after installation of a temporary spillway weir (TSW) at Little Goose Dam, Washington, in 2009. The purpose of the study was to document fish passage and survival when the dam was operated with the TSW in place. Spillway weirs are one of several methods used to improve downstream passage of juvenile salmonids. Each spillway weir design is based on the concept of providing an overflow weir with a depth more similar to the natural migration depth of juvenile salmonids than conventional spill bays. Little Goose Dam was the last of the four lower Snake River dams to have a spillway weir installed. This was the first year that some form of surface passage device was operating at all Snake River and Columbia River dams between Lewiston, Idaho, and the Columbia River estuary. The study design stipulated that a total of 30 percent of the river discharge would continuously be passed over the TSW and the conventional spill bays, and this percentage was achieved. The TSW also was to be operated at the 'low crest' elevation during the spring and the 'high crest' elevation during the summer, but the TSW was only operated at the low crest elevation during this study. Behavior, passage, and survival of spring and summer juvenile salmonid migrants passing through Little Goose Dam were examined using radio telemetry. Survival was estimated using the Route Specific Survival Model (RSSM) by releasing tagged fish near Central Ferry State Park 21 kilometers upstream of the dam and in the tailrace approximately 0.5 kilometer downstream of the dam. From April 18 to May 21, 2009, 1,520 yearling Chinook salmon (Oncorhynchus tshawytscha) and 1,517 juvenile steelhead (O. mykiss) were radio tagged and released. From June 6 to July 5, 2009, 4,251 subyearling Chinook salmon (O. tshawytscha) were radio tagged and released. Release dates of subyearling Chinook salmon were selected to avoid 'reservoir-type' fish that cease to migrate around July. Detection sites were installed in the forebay 2 kilometers upstream of the dam, on the dam, and at several sites downstream. Detection equipment was operated from April 18 to June 5, 2009, and from June 6 to July 6, 2009, hereinafter referred to as the study periods. We describe passage behaviors through the forebay, main passage routes, and tailrace, survival probabilities through the pool (release to the forebay) and forebay and passage and survival probabilities through the main passage routes (TSW, conventional spill bays, turbines, juvenile bypass), and survival passing the concrete (the dam itself) and the dam (concrete plus the forebay).

Walla Walla River Basin Fish Screen Evaluations; Nursery Bridge Fishway and Garden City/Lowden II Sites, 2003 Technical Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vucelick, J.; McMichael, G.

2003-11-01

Pacific Northwest National Laboratory evaluated the fish screens at the Nursery Bridge Fishway and the newly constructed Garden City/Lowden II site west of Walla Walla, Washington, in the Walla Walla River Basin during spring and summer 2003. Both fish screen facilities were examined to determine if they were being effectively operated and maintained to provide for safe fish passage. At the Nursery Bridge Fishway, the screens were evaluated specifically to determine whether the louvers that aid in controlling water flow from behind the screens could be adjusted so that the screens would meet fish protection criteria. Data were collected tomore » determine whether velocities in front of the screens and in the bypasses met current National Oceanic and Atmospheric Administration Fisheries (NOAA Fisheries) (formerly National Marine Fisheries Service (NMFS)) criteria to promote safe and timely fish passage before and after changing the louver settings. Rock weirs downstream of the dam were also evaluated to determine whether they might impede upstream migration of juvenile salmonids during low flow conditions. At the Garden City/Lowden II site, data were collected to establish a baseline for operating conditions and to determine whether any changes in the baffle settings were needed.« less

Downstream movement of fall Chinook salmon juveniles in the lower Snake River reservoirs during winter and early spring

USGS Publications Warehouse

Tiffan, Kenneth F.; Kock, Tobias J.; Connor, William P.; Mullins, Frank; Steinhorst, R. Kirk

2012-01-01

We conducted a 3-year radiotelemetry study in the lower Snake River to (1) determine whether juvenile fall Chinook salmon Oncorhynchus tshawytscha pass dams during winter, when bypass systems and structures designed to prevent mortality are not operated; (2) determine whether downstream movement rate varies annually, seasonally, and from reservoir to reservoir; and (3) identify some of the factors that contribute to annual, seasonal, and spatial variation in downstream movement rate. Fall Chinook salmon juveniles moved downstream up to 169 km and at a sufficiently fast rate (7.5 km/d) such that large percentages (up to 93%) of the fish passed one or more dams during the winter. Mean downstream movement rate varied annually (9.2–11.3 km/d), increased from winter (7.5 km/d) to spring (16.4 km/d), and increased (from 6.9 to 16.8 km/d) as fish moved downstream from reservoir to reservoir. Fish condition factor at tagging explained some of the annual variation in downstream movement rate, whereas water particle velocity and temperature explained portions of the seasonal variation. An increase in migrational disposition as fish moved downstream helped to explain the spatial variation. The potential cost of winter movement might be reduced survival due to turbine passage at a time when the bypass systems and spillway passage structures are not operated. Efforts to understand and increase passage survival of winter migrants in large impoundments might help to rehabilitate some imperiled anadromous salmonid populations.

Restoring stream habitat connectivity: a proposed method for prioritizing the removal of resident fish passage barriers.

PubMed

O'Hanley, Jesse R; Wright, Jed; Diebel, Matthew; Fedora, Mark A; Soucy, Charles L

2013-08-15

Systematic methods for prioritizing the repair and removal of fish passage barriers, while growing of late, have hitherto focused almost exclusively on meeting the needs of migratory fish species (e.g., anadromous salmonids). An important but as of yet unaddressed issue is the development of new modeling approaches which are applicable to resident fish species habitat restoration programs. In this paper, we develop a budget constrained optimization model for deciding which barriers to repair or remove in order to maximize habitat availability for stream resident fish. Habitat availability at the local stream reach is determined based on the recently proposed C metric, which accounts for the amount, quality, distance and level of connectivity to different stream habitat types. We assess the computational performance of our model using geospatial barrier and stream data collected from the Pine-Popple Watershed, located in northeast Wisconsin (USA). The optimization model is found to be an efficient and practical decision support tool. Optimal solutions, which are useful in informing basin-wide restoration planning efforts, can be generated on average in only a few minutes. Copyright © 2013 Elsevier Ltd. All rights reserved.

Swimming performance of upstream migrant fishes in open-channel flow: A new approach to predicting passage through velocity barriers

USGS Publications Warehouse

Haro, A.; Castro-Santos, T.; Noreika, J.; Odeh, M.

2004-01-01

The ability to traverse barriers of high-velocity flow limits the distributions of many diadromous and other migratory fish species, yet very few data exist that quantify this ability. We provide a detailed analysis of sprint swimming ability of six migratory fish species (American shad (Alosa sapidissima), alewife (Alosa pseudoharengus), blueback herring (Alosa aestivalis), striped bass (Morone saxatilis), walleye (Stizostedion vitreum), and white sucker (Catostomus commersoni)) against controlled water velocities of 1.5-4.5 m??s-1 in a large, open-channel flume. Performance was strictly voluntary: no coercive incentives were used to motivate fish to sprint. We used these data to generate models of maximum distance traversed, taking into account effects of flow velocity, body length, and temperature. Although the maximum distance traversed decreased with increasing velocity, the magnitude of this effect varied among species. Other covariate effects were likewise variable, with divergent effects of temperature and nonuniform length effects. These effects do not account for all of the variability in performance, however, and behavioral traits may account for observed interspecific differences. We propose the models be used to develop criteria for fish passage structures, culverts, and breached dams.

Use of an autonomous sensor to evaluate the biological performance of the advanced turbine at Wanapum Dam

DOE PAGES

Deng, Zhiqun; Carlson, Thomas J.; Duncan, Joanne P.; ...

2010-10-13

Hydropower is the largest renewable energy resource in the United States and the world. However, hydropower dams have adverse ecological impacts because migrating fish may be injured or killed when they pass through hydroturbines. In the Columbia and Snake River basins, dam operators and engineers are required to make those hydroelectric facilities more fish-friendly through changes in hydroturbine design and operation after fish population declines and the subsequent listing of several species of Pacific salmon under the Endangered Species Act of 1973. Public Utility District No. 2 of Grant County, Washington, requested authorization from the Federal Energy Regulatory Commission tomore » replace the ten turbines at Wanapum Dam with advanced hydropower turbines designed to improve survival for fish passing through the turbines while improving operation efficiency and increasing power generation. As an additional measure to the primary metric of direct injury and mortality rates of juvenile Chinook salmon using balloon tag-recapture methodology, this study used an autonomous sensor device - the Sensor Fish - to provide insight into the specific hydraulic conditions and physical stresses experienced by the fish as well as the specific causes of fish biological response. We found that the new hydroturbine blade shape and the corresponding reduction of turbulence in the advanced hydropower turbine were effective in meeting the objectives of improving fish survival while enhancing operational efficiency of the dam. The frequency of severe events based on Sensor Fish pressure and acceleration measurements showed trends similar to those of fish survival determined by the balloon tag-recapture methodology. In addition, the new turbine provided a better pressure and rate of pressure change environment for fish passage. Altogether, the Sensor Fish data indicated that the advanced hydroturbine design improved passage of juvenile salmon at Wanapum Dam.« less

Identifying and Evaluating Options for Improving Sediment Management and Fish Passage at Hydropower Dams in the Lower Mekong River Basin

NASA Astrophysics Data System (ADS)

Wild, T. B.; Reed, P. M.; Loucks, D. P.

2015-12-01

The Mekong River basin in Southeast Asia is undergoing intensive and pervasive hydropower development to satisfy demand for increased energy and income to support its growing population of 60 million people. Just 20 years ago this river flowed freely. Today some 30 large dams exist in the basin, and over 100 more are being planned for construction. These dams will alter the river's natural water, sediment and nutrient flows, thereby impacting river morphology and ecosystems, and will fragment fish migration pathways. In doing so, they will degrade one of the world's most valuable and productive freshwater fish habitats. For those dams that have not yet been constructed, there still exist opportunities to modify their siting, design and operation (SDO) to potentially achieve a more balanced set of tradeoffs among hydropower production, sediment/nutrient passage and fish passage. We introduce examples of such alternative SDO opportunities for Sambor Dam in Cambodia, planned to be constructed on the main stem of the Mekong River. To evaluate the performance of such alternatives, we developed a Python-based simulation tool called PySedSim. PySedSim is a daily time step mass balance model that identifies the relative tradeoffs among hydropower production, and flow and sediment regime alteration, associated with reservoir sediment management techniques such as flushing, sluicing, bypassing, density current venting and dredging. To date, there has been a very limited acknowledgement or evaluation of the significant uncertainties that impact the evaluation of SDO alternatives. This research is formalizing a model diagnostic assessment of the key assumptions and parametric uncertainties that strongly influence PySedSim SDO evaluations. Using stochastic hydrology and sediment load data, our diagnostic assessment evaluates and compares several Sambor Dam alternatives using several performance measures related to energy production, sediment trapping and regime alteration, and fish passage. We show that performance of the alternatives can be highly variable, and conduct a simultaneous multi-parameter factor screening sensitivity analysis to identify the subset of PySedSim model parameters that contribute most significantly to performance uncertainties in attempts to identify the more robust options.

Evidence for geomagnetic imprinting as a homing mechanism in Pacific salmon.

PubMed

Putman, Nathan F; Lohmann, Kenneth J; Putman, Emily M; Quinn, Thomas P; Klimley, A Peter; Noakes, David L G

2013-02-18

In the final phase of their spawning migration, Pacific salmon use chemical cues to identify their home river, but how they navigate from the open ocean to the correct coastal area has remained enigmatic. To test the hypothesis that salmon imprint on the magnetic field that exists where they first enter the sea and later seek the same field upon return, we analyzed a 56-year fisheries data set on Fraser River sockeye salmon, which must detour around Vancouver Island to approach the river through either a northern or southern passageway. We found that the proportion of salmon using each route was predicted by geomagnetic field drift: the more the field at a passage entrance diverged from the field at the river mouth, the fewer fish used the passage. We also found that more fish used the northern passage in years with warmer sea surface temperature (presumably because fish were constrained to more northern latitudes). Field drift accounted for 16% of the variation in migratory route used, temperature 22%, and the interaction between these variables 28%. These results provide the first empirical evidence of geomagnetic imprinting in any species and imply that forecasting salmon movements is possible using geomagnetic models. Copyright © 2013 Elsevier Ltd. All rights reserved.

Walla Walla River Basin Fish Screen Evaluations, 2003: Nursery Bridge Fishway and Garden City-Lowden II

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vucelick, Jessica A.; McMichael, Geoffrey A.

2003-11-01

The Pacific Northwest National Laboratory (PNNL) evaluated the fish screens at the Nursery Bridge Fishway and at the newly constructed Garden City-Lowden II site west of Walla Walla, Washington in the Walla Walla River Basin during the spring and summer of 2003. Both fish screen facilities were examined to determine if they were being effectively operated and maintained to provide for safe fish passage. At the Nursery Bridge Fishway, the screens were evaluated specifically to determine whether the louvers that aid in controlling water flow from behind the screens could be adjusted so that the screens would meet fish protectionmore » criteria. Data were collected to determine whether velocities in front of the screens and in the bypasses met current National Oceanic and Atmospheric Administration Fisheries ((NOAA Fisheries), formerly National Marine Fisheries Service (NMFS)) criteria to promote safe and timely fish passage before and after changing the louver settings. Rock weirs downstream of the dam were also evaluated to determine whether they might impede upstream migration of juvenile salmonids during low flow conditions. At the Garden City-Lowden II site, data were collected to establish a baseline for operating conditions and to determine whether any changes in the baffle settings were needed. Based on the results of our studies in 2003, we concluded: Nursery Bridge Site: (1) 68% of the initial velocity measurements on the west screen exceeded the NOAA Fisheries criteria of 0.4 ft/s for approach velocity; (2) A simple adjustment of the existing louvers was not sufficient to fix the problem; (3) The sediment and debris load in the river upstream of the screens exceeded the design criteria for the site, which had frequent breakdowns in the screen cleaning systems; and (4) The rock weirs downstream of the dam would not be expected to impede upstream movement of juvenile fish during low flow conditions. Garden City-Lowden II: (1) The flat inclined-plate screen design appeared to be efficiently protecting juvenile fish from entrainment, impingement and migration delay; (2) Approach velocities met the NMFS criteria of less than 0.4 ft/s in June, and no change in baffle settings was needed; (3) Sweep velocities were generally lower than approach velocities and did not increase toward the downstream end of the site; and (4) The automated cleaning system at the Garden City-Lowden II site works adequately when sediment loads are low, though its effectiveness at cleaning the screens decreases as sediment and debris loads and algal growth increase.« less

Frankenmuth Dam Fish Passage, Cass River, Saginaw County, Michigan

DTIC Science & Technology

2012-11-01

2009letter, our office and the Alpena Fish and Wildlife Conservation Office have been worldng with you to develop monitoring programs to assess changes...Sargent. MDNR. Wildlife Division. Lansing, MI Andrea Ania, USFWS, Alpena , M1 EA - C-7 ZIIBIWING CENTER ot A~t.:..~ c •. lt • .,..~ 1’¥- ,..1

75 FR 48642 - Proposed Information Collection; Comment Request; Tag Recapture Card

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-11

... extension of a currently approved information collection. The Cooperative Game Fish Tagging Program (CGFTP... cooperative effort between WHOI and the NOAA National Marine Fisheries (NMFS) as part of a comprehensive research program resulting from passage of the Migratory Game Fish Study Act of 1959 (Pub. L. 86- 359) and...

Critical swimming speeds of wild bull trout

USGS Publications Warehouse

Mesa, M.G.; Weiland, L.K.; Zydlewski, G.B.

2004-01-01

We estimated the critical swimming speeds (Ucrit) of wild bull trout at 6??, 11??, and 15??C in laboratory experiments. At 11??C, 5 fish ranging from 11 to 19 cm in length had a mean Ucrit of 48.24 cm/s or 3.22 body lengths per second (BL/s). Also at 11??C , 6 fish from 32 to 42 cm had a mean Ucrit of 73.99 cm/s or 2.05 BL/s. At 15??C, 5 fish from 14 to 23 cm had a mean Ucrit of 54.66 cm/s or 2.88 BL/s. No fish successfully swam at 6??C. Swim speed was significantly influenced by fish length. Many bull trout performed poorly in our enclosed respirometers: of 71 Ucrit tests we attempted, only the 16 described above were successful. Bull trout that refused to swim held station within tunnels by using their pectoral fins as depressors, or they rested and later became impinged against a downstream screen. Several common techniques did not stimulate consistent swimming activity in these fish. Our estimates of U crit for bull trout provide an understanding of their performance capacity and will be useful in modeling efforts aimed at improving fish passage structures. We recommend that fishway or culvert designers concerned with bull trout passage maintain velocities within their structures at or below our estimates of Ucrit, thus taking a conservative approach to ensuring that these fish can ascend migratory obstacles safely.

Monitoring of Downstream Salmon and Steelhead at Federal Hydroelectric Facilities, 1993 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wood, Lynette A.; Graves, Ritchie J.; Killins, Susan D.

1994-04-01

The seaward migration of juvenile salmonids was monitored by the National Marine Fisheries Service (NMFS) at Bonneville and John Day Dams on the Columbia River in 1993 (river mile 145 and 216, respectively, Figure 1). The NMFS Smolt Monitoring Project is part of a larger Smolt Monitoring Program (SMP) coordinated by the Fish Passage Center (FPC) for the Columbia Basin Fish and Wildlife Authority. This program is carried out under the auspices of the Northwest Power Planning Council Fish and Wildlife Program and is funded by the Bonneville Power Administration. The purpose of the SMP is to index Columbia Basinmore » juvenile salmonid stocks and develop and implement flow and spill requests intended to facilitate fish passage. Data is also used for travel time, migration timing and relative run size magnitude analysis. The purpose of the NMFS portion of the program is to provide FPC with species specific data; numbers, condition, length, brand recaptures and flow data from John Day, and Bonneville Dams on a daily basis.« less

Lower Methow tributaries intensive effectiveness monitoring study. Interim report

USGS Publications Warehouse

Martens, Kyle D.; Connolly, Patrick J.

2008-01-01

Actions have been taken to replace diversion dams in lower Beaver Creek with a series of rock vortex weirs. Some of these diversion dams have been in place for over 100 years, and they have impaired or completely blocked upstream migration of fish. Three diversion dams were replaced in 2003 (Lower Stokes, Thurlow Transfer, and Upper Stokes), and a forth diversion dam was replaced in 2004 (Fort-Thurlow). These vortex weirs were designed and installed under the supervision of U.S. Bureau of Reclamation (BOR) engineers and completed in accordance to National Marine Fisheries Service (NMFS) and Washington Department of Fisheries and Wildlife (WDFW) fish passage criteria. The projects were designed to meet fish species recovery needs described by the Endangered Species Act (ESA) and the “BiOp” issued by NMFS (2000a). Since no specific guidelines have been identified to date specifically addressing diversion dams, WDFW and NMFS guidelines are being considered as the target design and performance criteria for the sites monitored as part of this project. Where used, the vortex weirs were designed to maintain irrigation diversion capabilities while improving fish passage.

Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project, Annual Report 2002-2003.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sears, Sheryl

2004-01-01

The construction of Chief Joseph and Grand Coulee Dams completely and irrevocably blocked anadromous fish migrations to the Upper Columbia River. Historically this area hosted vast numbers of salmon returning to their natal waters to reproduce and die. For the native peoples of the region, salmon and steelhead were a principle food source, providing physical nourishment and spiritual sustenance, and contributing to the religious practices and the cultural basis of tribal communities. The decaying remains of spawned-out salmon carcasses contributed untold amounts of nutrients into the aquatic, aerial, and terrestrial ecosystems of tributary habitats in the upper basin. Near themore » present site of Kettle Falls, Washington, the second largest Indian fishery in the state existed for thousands of years. Returning salmon were caught in nets and baskets or speared on their migration to the headwater of the Columbia River in British Columbia. Catch estimates at Kettle Falls range from 600,000 in 1940 to two (2) million around the turn of the century (UCUT, Report No.2). The loss of anadromous fish limited the opportunities for fisheries management and enhancement exclusively to those actions addressed to resident fish. The Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project is a mitigation project intended to enhance resident fish populations and to partially mitigate for anadromous fish losses caused by hydropower system impacts. This substitution of resident fish for anadromous fish losses is considered in-place and out-of-kind mitigation. Upstream migration and passage barriers limit the amount of spawning and rearing habitat that might otherwise be utilized by rainbow trout. The results of even limited stream surveys and habitat inventories indicated that a potential for increased natural production exists. However, the lack of any comprehensive enhancement measures prompted the Upper Columbia United Tribes Fisheries Center (UCUT), Colville Confederated Tribes (CCT), Spokane Tribe of Indians (STI) and Washington Department of Fish and Wildlife (WDFW) to develop and propose a comprehensive fishery management plan for Lake Roosevelt. The Rainbow Trout Habitat/Passage Improvement Project (LRHIP) was designed with goals directed towards increasing natural production while maintaining genetic integrity among current tributary stocks. The initial phase of the Lake Roosevelt Habitat Improvement Project (Phase I, baseline data collection: 1990-91) was focused on the assessment of limiting factors, including the quality and quantity of available spawning gravel, identification of passage barriers, and assessment of other constraints. After the initial assessment of stream parameters, five streams meeting specific criteria were selected for habitat/passage improvement projects (Phase II, implementation -1992-1995). Four of these projects were on the Colville Indian Reservation South Nanamkin, North Nanamkin, Louie and Iron Creeks and one Blue Creek was on the Spokane Indian Reservation. At the completion of project habitat improvements, the final phase (Phase III, monitoring-1996-2000) began. This phase assessed the changes and determined the success achieved through the improvements. Data analysis showed that passage improvements are successful for increasing habitat availability and use. The results of in-stream habitat improvements were inconclusive. Project streams, to the last monitoring date, have shown increases in fish density following implementation of the improvements. In 2000 Bridge Creek, on the Colville Reservation was selected for the next phase of improvements. Data collection, including baseline stream survey and population data collection, was carried out during 2001 in preparation for the design and implementation of stream habitat/passage improvements. Agencies cooperating on the project include the Colville Confederated Tribes (CCT), Natural Resource Conservation Service (NRCS, Ferry County District), Ferry County Conservation District, and Ferry County. The Bonneville Power Administration (BPA) provided project funding support and program integration assistance. A stock of redband rainbow trout, were discovered in 2001 in an isolated section of Bridge Creek above a set of waterfalls. DNA microsatellite analysis was conducted at the University of Idaho and indicated that very little if any hybridization. The targeted species in the genetic analysis was red band/rainbow trout (Oncorhynchus mykiss spp.). The sub-contract is with Madison Powell and Joyce Faler at the Center for Salmonid and Freshwater Species at Risk at the University of Idaho/HFCES. DNA analysis used mitochondrial and nuclear RFLP markers along with two microsatellite loci. Sample populations were screened for detectable levels of introgressive hybridization arising from possible admixtures of hatchery coastal rainbow trout with native red band trout.« less

Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project, Annual Report 2001-2002.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sears, Sheryl

2003-01-01

The construction of Chief Joseph and Grand Coulee Dams completely and irrevocably blocked anadromous fish migrations to the Upper Columbia River. Historically this area hosted vast numbers of salmon returning to their natal waters to reproduce and die. For the native peoples of the region, salmon and steelhead were a principle food source, providing physical nourishment and spiritual sustenance, and contributing to the religious practices and the cultural basis of tribal communities. The decaying remains of spawned-out salmon carcasses contributed untold amounts of nutrients into the aquatic, aerial, and terrestrial ecosystems of tributary habitats in the upper basin. Near themore » present site of Kettle Falls, Washington, the second largest Indian fishery in the state existed for thousands of years. Returning salmon were caught in nets and baskets or speared on their migration to the headwater of the Columbia River in British Columbia. Catch estimates at Kettle Falls range from 600,000 in 1940 to two (2) million around the turn of the century (UCUT, Report No.2). The loss of anadromous fish limited the opportunities for fisheries management and enhancement exclusively to those actions addressed to resident fish. The Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project is a mitigation project intended to enhance resident fish populations and to partially mitigate for anadromous fish losses caused by hydropower system impacts. This substitution of resident fish for anadromous fish losses is considered in-place and out-of-kind mitigation. Upstream migration and passage barriers limit the amount of spawning and rearing habitat that might otherwise be utilized by rainbow trout. The results of even limited stream surveys and habitat inventories indicated that a potential for increased natural production exists. However, the lack of any comprehensive enhancement measures prompted the Upper Columbia United Tribes Fisheries Center (UCUT), Colville Confederated Tribes (CCT), Spokane Tribe of Indians (STI) and Washington Department of Fish and Wildlife (WDFW) to develop and propose a comprehensive fishery management plan for Lake Roosevelt. The Rainbow Trout Habitat/Passage Improvement Project (LRHIP) was designed with goals directed towards increasing natural production while maintaining genetic integrity among current tributary stocks. The initial phase of the Lake Roosevelt Habitat Improvement Project (Phase I, baseline data collection: 1990-91) was focused on the assessment of limiting factors, including the quality and quantity of available spawning gravel, identification of passage barriers, and assessment of other constraints. After the initial assessment of stream parameters, five streams meeting specific criteria were selected for habitat/passage improvement projects (Phase II, implementation -1992-1995). Four of these projects were on the Colville Indian Reservation South Nanamkin, North Nanamkin, Louie and Iron Creeks and one Blue Creek was on the Spokane Indian Reservation. At the completion of project habitat improvements, the final phase (Phase III, monitoring-1996-2000) began. This phase assessed the changes and determined the success achieved through the improvements. Data analysis showed that passage improvements are successful for increasing habitat availability and use. The results of in-stream habitat improvements were inconclusive. Project streams, to the last monitoring date, have shown increases in fish density following implementation of the improvements. In 2000 Bridge Creek, on the Colville Reservation was selected for the next phase of improvements. Data collection, including baseline stream survey and population data collection, was carried out during 2001 in preparation for the design and implementation of stream habitat/passage improvements. Agencies cooperating on the project include the Colville Confederated Tribes (CCT), Natural Resource Conservation Service (NRCS, Ferry County District), Ferry County Conservation District, and Ferry County. The Bonneville Power Administration (BPA) provided project funding support and program integration assistance. A stock of redband rainbow trout, were discovered in 2001 in an isolated section of Bridge Creek above a set of waterfalls. DNA microsatellite analysis was conducted at the University of Idaho and indicated that very little if any hybridization. The targeted species in the genetic analysis was red band/rainbow trout (Oncorhynchus mykiss spp.). The sub-contract is with Madison Powell and Joyce Faler at the Center for Salmonid and Freshwater Species at Risk at the University of Idaho/HFCES. DNA analysis used mitochondrial and nuclear RFLP markers along with two microsatellite loci. Sample populations were screened for detectable levels of introgressive hybridization arising from possible admixtures of hatchery rainbow trout with native red band trout.« less

An assessment of fish assemblage structure in a large river

USGS Publications Warehouse

Kiraly, Ian A.; Coghlan, S.M.; Zydlewski, Joseph D.; Hayes, D.

2015-01-01

The Penobscot River drains the largest watershed in Maine and once provided spawning and rearing habitats to 11 species of diadromous fishes. The construction of dams blocked migrations of these fishes and likely changed the structure and function of fish assemblages throughout the river. The proposed removal of two main-stem dams, improved upstream fish passage at a third dam, and construction of a fish bypass on a dam obstructing a major tributary is anticipated to increase passage of and improve habitat connectivity for both diadromous and resident fishes. We captured 61 837 fish of 35 species in the Penobscot River and major tributaries, through 114 km of boat electrofishing. Patterns of fish assemblage structure did not change considerably during our sampling; relatively few species contributed to seasonal and annual variability within the main-stem river, including smallmouth bass Micropterus dolomieu, white sucker Catostomus commersonii, pumpkinseed Lepomis gibbosus, and golden shiner Notemigonus crysoleucas. However, distinct fish assemblages were present among river sections bounded by dams. Many diadromous species were restricted to tidal waters downriver of the Veazie Dam; Fundulus species were also abundant within the tidal river section. Smallmouth bass and pumpkinseed were most prevalent within the Veazie Dam impoundment and the free-flowing river section immediately upriver, suggesting the importance of both types of habitat that supports multiple life stages of these species. Further upriver, brown bullhead Ameiurus nebulosus, yellow perch Perca flavescens, chain pickerel Esox niger, and cyprinid species were more prevalent than within any other river section. Our findings describe baseline spatial patterns of fish assemblages in the Penobscot River in relation to dams with which to compare assessments after dam removal occurs.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Carlson, Thomas J.; Welch, Abigail E.

A multifactor study was conducted by Battelle for the US Army Corps of Engineers to assess the significance of the presence of a radio telemetry transmitter on the effects of rapid decompression from simulated hydro turbine passage on depth acclimated juvenile run-of-the-river Chinook salmon. Study factors were: (1) juvenile chinook salmon age;, subyearling or yearling, (2) radio transmitter present or absent, (3) three transmitter implantation factors: gastric, surgical, and no transmitter, and (4) four acclimation depth factors: 1, 10, 20, and 40 foot submergence equivalent absolute pressure, for a total of 48 unique treatments. Exposed fish were examined for changesmore » in behavior, presence or absence of barotrauma injuries, and immediate or delayed mortality. Logistic models were used to test hypotheses that addressed study objectives. The presence of a radio transmitter was found to significantly increase the risk of barotrauma injury and mortality at exposure to rapid decompression. Gastric implantation was found to present a higher risk than surgical implantation. Fish were exposed within 48 hours of transmitter implantation so surgical incisions were not completely healed. The difference in results obtained for gastric and surgical implantation methods may be the result of study design and the results may have been different if tested fish had completely healed surgical wounds. However, the test did simulate the typical surgical-release time frame for in-river telemetry studies of fish survival so the results are probably representative for fish passing through a turbine shortly following release into the river. The finding of a significant difference in response to rapid decompression between fish bearing radio transmitters and those not implies a bias may exist in estimates of turbine passage survival obtained using radio telemetry. However, the rapid decompression (simulated turbine passage) conditions used for the study represented near worst case exposure for fish passing through turbines. At this time, insufficient data exist about the distribution of river-run fish entering turbines, and particularly, the distribution of fish passing through turbine runners, to extrapolate study findings to the population of fish passing through FCRPS turbines. This study is the first study examining rapid decompression study to include acclimation depth as an experimental factor for physostomous fish. We found that fish acclimated to deeper depth were significantly more vulnerable to barotrauma injury and death. Insufficient information about the distribution of fish entering turbines and their depth acclimation currently exists to extrapolate these findings to the population of fish passing through turbines. However, the risk of barotrauma for turbine-passed fish could be particularly high for subyearling Chinook salmon that migrate downstream at deeper depths late in the early summer portion of the outmigration. Barotrauma injuries led to immediate mortality delayed mortality and potential mortality due to increased susceptibility to predation resulting from loss of equilibrium or swim bladder rupture.« less

Evaluation of Head-of-Reservoir Conditions for Downstream Migration of Juvenile Chinook Salmon and Steelhead at Shasta Lake, California

NASA Astrophysics Data System (ADS)

Clancey, K. M.; Saito, L.; Svoboda, C.; Bender, M. D.; Hannon, J.; Hellmann, K. M.

2015-12-01

Since completion of Shasta Dam, migration of Chinook salmon and steelhead trout in the Sacramento River has been blocked, causing loss of spawning and rearing habitat. This has been a factor leading to population declines of these fish species over several decades. Winter-run Chinook salmon, spring-run Chinook salmon and steelhead trout are now listed under the Endangered Species Act. A habitat assessment of the tributaries upstream of Shasta Dam showed that the Sacramento and McCloud tributaries have suitable habitat for reintroduction of adult salmon and steelhead for spawning. Such reintroduction would require downstream passage of juvenile Chinook salmon and steelhead past Shasta Dam. To evaluate the possibility of collecting and transporting juvenile Chinook salmon and steelhead past Shasta Dam, a CE-QUAL-W2 model of Shasta Lake and the Sacramento River, McCloud River, Pit River and Squaw Creek tributaries was used to assess where and when conditions were favorable at head-of-reservoir locations upstream of proposed temperature curtains to collect juvenile fish. Head-of-reservoir is the zone of transition between the river and the upstream end of the reservoir. Criteria for evaluating locations suitable to collect these fish included water temperature and velocities in the Sacramento and McCloud tributaries. Model output was analyzed during months of downstream migration under dry, median and wet year conditions. Potential for proposed temperature curtains, anchored and floating, to improve conditions for fish migration was also evaluated with the CE-QUAL-W2 model. Use of temperature curtains to assist fish migration is a novel approach that to our knowledge has not previously been assessed for recovery of Chinook salmon and steelhead populations. Providing safe passage conditions is challenging, however the study findings may assist in formulation of a juvenile fish passage alternative that is suitable for Shasta Lake.

Substrate roughening improves swimming performance in two small-bodied riverine fishes: implications for culvert remediation and design

PubMed Central

Rodgers, Essie M.; Heaslip, Breeana M.; Cramp, Rebecca L.; Riches, Marcus; Gordos, Matthew A.

2017-01-01

Abstract Worldwide declines in riverine fish abundance and diversity have been linked to the fragmentation of aquatic habitats through the installation of instream structures (e.g. culverts, dams, weirs and barrages). Restoring riverine connectivity can be achieved by remediating structures impeding fish movements by, for example, replacing smooth substrates of pipe culverts with naturalistic substrates (i.e. river stones; culvert roughening). However, empirical evaluations of the efficacy of such remediation efforts are often lacking despite the high economic cost. We assessed the effectiveness of substrate roughening in improving fish swimming performance and linked this to estimates of upstream passage success. Critical swimming speeds (Ucrit) of two small-bodied fish, purple-spotted gudgeon (Mogurnda adspersa; 7.7–11.6 cm total length, BL) and crimson-spotted rainbowfish (Melanotaenia duboulayi; 4.2–8.7 cm BL) were examined. Swimming trials were conducted in a hydraulic flume fitted with either a smooth acrylic substrate (control) or a rough substrate with fixed river stones. Swimming performance was improved on the rough compared to the smooth substrate, with Mo. adspersa (Ucrit-smooth = 0.28 ± 0.0 m s−1, 2.89 ± 0.1 BL s−1, Ucrit-rough = 0.36 ± 0.02 m s−1, 3.66 ± 0.22 BL s−1, mean ± s.e) and Me. duboulayi (Ucrit-smooth = 0.46 ± 0.01 m s−1, 7.79 ± 0.33 BL s−1; Ucrit-rough = = 0.55 ± 0.03 m s−1, 9.83 ± 0.67 BL s−1, mean ± s.e.) both experiencing a 26% increase in relative Ucrit. Traversable water velocity models predicted maximum water speeds allowing successful upstream passage of both species to substantially increase following roughening remediation. Together these findings suggest culvert roughening may be a solution which allows hydraulic efficiency goals to be met, without compromising fish passage. PMID:28567285

Substrate roughening improves swimming performance in two small-bodied riverine fishes: implications for culvert remediation and design.

PubMed

Rodgers, Essie M; Heaslip, Breeana M; Cramp, Rebecca L; Riches, Marcus; Gordos, Matthew A; Franklin, Craig E

2017-01-01

Worldwide declines in riverine fish abundance and diversity have been linked to the fragmentation of aquatic habitats through the installation of instream structures (e.g. culverts, dams, weirs and barrages). Restoring riverine connectivity can be achieved by remediating structures impeding fish movements by, for example, replacing smooth substrates of pipe culverts with naturalistic substrates (i.e. river stones; culvert roughening). However, empirical evaluations of the efficacy of such remediation efforts are often lacking despite the high economic cost. We assessed the effectiveness of substrate roughening in improving fish swimming performance and linked this to estimates of upstream passage success. Critical swimming speeds ( U crit ) of two small-bodied fish, purple-spotted gudgeon ( Mogurnda adspersa ; 7.7-11.6 cm total length, BL) and crimson-spotted rainbowfish ( Melanotaenia duboulayi ; 4.2-8.7 cm BL) were examined. Swimming trials were conducted in a hydraulic flume fitted with either a smooth acrylic substrate (control) or a rough substrate with fixed river stones. Swimming performance was improved on the rough compared to the smooth substrate, with Mo. adspersa ( U crit-smooth = 0.28 ± 0.0 m s -1 , 2.89 ± 0.1 BL s -1 , U crit-rough = 0.36 ± 0.02 m s -1 , 3.66 ± 0.22 BL s -1 , mean ± s.e) and Me. duboulayi ( U crit-smooth = 0.46 ± 0.01 m s -1 , 7.79 ± 0.33 BL s -1 ; U crit-rough = = 0.55 ± 0.03 m s -1 , 9.83 ± 0.67 BL s -1 , mean ± s.e.) both experiencing a 26% increase in relative U crit . Traversable water velocity models predicted maximum water speeds allowing successful upstream passage of both species to substantially increase following roughening remediation. Together these findings suggest culvert roughening may be a solution which allows hydraulic efficiency goals to be met, without compromising fish passage.

Fish assemblages in a western Iowa stream modified by grade control structures

USGS Publications Warehouse

Litvan, M.E.; Pierce, C.L.; Stewart, T.W.; Larson, C.J.

2008-01-01

Over 400 riprap grade control structures (GCSs) have been built in streams of western Iowa to reduce erosion and protect bridges, roads, and farmland. In conjunction with a companion study evaluating fish passage over GCSs in Turkey Creek, we evaluated the differences in fish assemblage and habitat characteristics in reaches immediately downstream from GCSs (GCS sites) and reaches at least 1 km from any GCS (non-GCS sites). The GCS sites were characterized by greater proportions of pool habitat, maximum depths, fish biomass, and abundance of juvenile largemouth bass Micropterus salmoides than were non-GCS sites. Index of biotic integrity (IBI) scores were poor or fair (<43 on a 0-100 scale) and not significantly different between the GCS and non-GCS sites. Additionally, we investigated both the longitudinal changes in fish assemblages in this GCS-fragmented stream and the changes in fish assemblages after slope modifications of three GCSs to facilitate fish passage. Thirteen fish species were present throughout the study area, whereas another 15 species exhibited truncated distributions not extending to the most upstream sampling location. After modification of the GCSs, IBI scores increased at seven of nine sites (mean increase =4.6 points). Also, channel catfish Ictalurus punctatus were detected 7.3 km upstream at sites where, 2 years before GCS modification, they had been absent from collections. Given the number and distribution of GCSs in western Iowa streams, understanding the effects of these structures is vital to the conservation and management of fish assemblages in this and other regions where GCSs or similar structures are used. ?? Copyright by the American Fisheries Society 2008.

Assessment of Barotrauma from Rapid Decompression of Depth-Acclimated Juvenile Chinook Salmon Bearing Radiotelemetry Transmitters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Carlson, Thomas J.; Welch, Abigail E.

2009-11-01

This study investigated the mortality of and injury to juvenile Chinook salmon Oncorhynchus tshawytscha exposed to simulated pressure changes associated with passage through a large Kaplan hydropower turbine. Mortality and injury varied depending on whether a fish was carrying a transmitter, the method of transmitter implantation, the depth of acclimation, and the size of the fish. Juvenile Chinook salmon implanted with radio transmitters were more likely than those without to die or sustain injuries during simulated turbine passage. Gastric transmitter implantation resulted in higher rates of injury and mortality than surgical implantation. Mortality and injury increased with increasing pressure ofmore » acclimation. Injuries were more common in subyearling fish than in yearling fish. Gas emboli in the gills and internal hemorrhaging were the major causes of mortality. Rupture of the swim bladder and emphysema in the fins were also common. This research makes clear that the exposure of juvenile Chinook salmon bearing radiotelemetry transmitters to simulated turbine pressures with a nadir of 8-19 kPa can result in barotrauma, leading to immediate or delayed mortality. The study also identified sublethal barotrauma injuries that may increase susceptibility to predation. These findings have significant implications for many studies that use telemetry devices to estimate the survival and behavior of juvenile salmon as they pass through large Kaplan turbines typical of those within the Columbia River hydropower system. Our results indicate that estimates of turbine passage survival for juvenile Chinook salmon obtained with radiotelemetry devices may be negatively biased.« less

Factors Affecting Route Selection and Survival of Steelhead Kelts at Snake River Dams in 2012 and 2013

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harnish, Ryan A.; Colotelo, Alison HA; Li, Xinya

2014-12-01

In 2012 and 2013, Pacific Northwest National Laboratory conducted a study that summarized the passage proportions and route-specific survival rates of steelhead kelts that passed through Federal Columbia River Power System (FCRPS) dams. To accomplish this, a total of 811 steelhead kelts were tagged with Juvenile Salmon Acoustic Telemetry System (JSATS) transmitters. Acoustic receivers, both autonomous and cabled, were deployed throughout the FCRPS to monitor the downstream movements of tagged-kelts. Kelts were also tagged with Passive Integrated Transponder tags to monitor passage through juvenile bypass systems and detect returning fish. The current study evaluated data collected in 2012 and 2013more » to identify individual, behavioral, environmental and dam operation variables that were related to passage and survival of steelhead kelts that passed through FCRPS dams. Bayesian model averaging of multivariable logistic regression models was used to identify the environmental, temporal, operational, individual, and behavioral variables that had the highest probability of influencing the route of passage and the route-specific survival probabilities for kelts that passed Lower Granite (LGR), Little Goose (LGS), and Lower Monumental (LMN) dams in 2012 and 2013. The posterior probabilities of the best models for predicting route of passage ranged from 0.106 for traditional spill at LMN to 0.720 for turbine passage at LGS. Generally, the behavior (depth and near-dam searching activity) of kelts in the forebay appeared to have the greatest influence on their route of passage. Shallower-migrating kelts had a higher probability of passing via the weir and deeper-migrating kelts had a higher probability of passing via the JBS and turbines than other routes. Kelts that displayed a higher level of near-dam searching activity had a higher probability of passing via the spillway weir and those that did less near-dam searching had a higher probability of passing via the JBS and turbines. The side of the river in which kelts approached the dam and dam operations also affected route of passage. Dam operations and the size and condition of kelts were found to have the greatest effect on route-specific survival probabilities for fish that passed via the spillway at LGS. That is, longer kelts and those in fair condition had a lower probability of survival for fish that passed via the spillway weir. The survival of spillway weir- and deep-spill passed kelts was positively correlated with the percent of the total discharge that passed through turbine unit 4. Too few kelts passed through the traditional spill, JBS, and turbine units to evaluate survival through these routes. The information gathered in this study describes Snake River steelhead kelt passage behavior, rates, and distributions through the FCRPS as well as provide information to biologists and engineers about the dam operations and abiotic conditions that are related to passage and survival of steelhead kelts.« less

Analysis of dam-passage survival of yearling and subyearling Chinook salmon and juvenile steelhead at The Dalles Dam, Oregon, 2010

USGS Publications Warehouse

Beeman, John W.; Kock, Tobias J.; Perry, Russell W.; Smith, Steven G.

2011-01-01

We performed a series of analyses of mark-recapture data from a study at The Dalles Dam during 2010 to determine if model assumptions for estimation of juvenile salmonid dam-passage survival were met and if results were similar to those using the University of Washington's newly developed ATLAS software. The study was conducted by the Pacific Northwest National Laboratory and used acoustic telemetry of yearling Chinook salmon, juvenile steelhead, and subyearling Chinook salmon released at three sites according to the new virtual/paired-release statistical model. This was the first field application of the new model, and the results were used to measure compliance with minimum survival standards set forth in a recent Biological Opinion. Our analyses indicated that most model assumptions were met. The fish groups mixed in time and space, and no euthanized tagged fish were detected. Estimates of reach-specific survival were similar in fish tagged by each of the six taggers during the spring, but not in the summer. Tagger effort was unevenly allocated temporally during tagging of subyearling Chinook salmon in the summer; the difference in survival estimates among taggers was more likely a result of a temporal trend in actual survival than of tagger effects. The reach-specific survival of fish released at the three sites was not equal in the reaches they had in common for juvenile steelhead or subyearling Chinook salmon, violating one model assumption. This violation did not affect the estimate of dam-passage survival, because data from the common reaches were not used in its calculation. Contrary to expectation, precision of survival estimates was not improved by using the most parsimonious model of recapture probabilities instead of the fully parameterized model. Adjusting survival estimates for differences in fish travel times and tag lives increased the dam-passage survival estimate for yearling Chinook salmon by 0.0001 and for juvenile steelhead by 0.0004. The estimate was unchanged for subyearling Chinook salmon. The tag-life-adjusted dam-passage survival estimates from our analyses were 0.9641 (standard error [SE] 0.0096) for yearling Chinook salmon, 0.9534 (SE 0.0097) for juvenile steelhead, and 0.9404 (SE 0.0091) for subyearling Chinook salmon. These were within 0.0001 of estimates made by the University of Washington using the ATLAS software. Contrary to the intent of the virtual/paired-release model to adjust estimates of the paired-release model downward in order to account for differential handling mortality rates between release groups, random variation in survival estimates may result in an upward adjustment of survival relative to estimates from the paired-release model. Further investigation of this property of the virtual/paired-release model likely would prove beneficial. In addition, we suggest that differential selective pressures near release sites of the two control groups could bias estimates of dam-passage survival from the virtual/paired-release model.

Winter Fish Populations in Probable Locations of Air Bubblers in the St. Marys River-Lake Superior Area

DTIC Science & Technology

1980-09-01

Lawrence Seaway Navigation Season Extension, Draft Main Report and Environmental Statement. Detroit, Michigan. Potential effects on fish were discussed...to keep channels ice free for winter vessel passage. The stucies were Jone to determine base line ecological conditions and the effects of the...Subjects were: "Ecological effects of air bub- blers in the winter, a partially annotated bibliography" and "Annotated bibliography on winter fish and

Final Independent External Peer Review Report for the Intake Diversion Dam Modification Lower Yellowstone Project, Montana Draft Supplement to the 26 April 2010 Environmental Assessment and Appendices

DTIC Science & Technology

2013-02-08

Fish and Wildlife Service WRDA Water Resources Development Act Intake Project IEPR Final IEPR Report February 8, 2013 x... Wildlife Service (USFWS), Natural Resources Conservation Service (NRCS), Montana Department of Environmental Quality, The Nature Conservancy...30% design features and channel entrance and exit pre-appraisal study to provide fish passage around Intake Dam, Montana. U.S. Fish and Wildlife

CE-QUAL-W2 Modeling of Head-of-Reservoir Conditions at Shasta Reservoir, California

NASA Astrophysics Data System (ADS)

Clancey, K. M.; Saito, L.; Svoboda, C.; Bender, M. D.; Hannon, J.

2014-12-01

Restoration of Chinook salmon and steelhead is a priority in the Sacramento River Basin since they were listed under the Endangered Species Act in 1989 and 1998, respectively. Construction of Shasta Dam and Reservoir obstructed fish migration, resulting in severe population declines. Efforts have been undertaken to restore the fisheries, including evaluation of opportunities for reintroducing Chinook salmon upstream of the dam and providing juvenile fish passage downstream past Shasta Dam. Shasta Reservoir and the Sacramento River and McCloud River tributaries have been modeled with CE-QUAL-W2 (W2) to assess hydrodynamic and temperature conditions with and without surface curtains to be deployed in the tributaries. Expected head-of-reservoir tributary conditions of temperature and water depth are being simulated under dry, median and wet year conditions. Model output is analyzed during months of downstream migration of fish from upstream Sacramento and McCloud River tributaries. W2 will be used to determine presence of favorable conditions for juvenile rearing with proposed surface temperature curtains. Evaluation of favorable conditions for fish includes assessment of water temperature, velocities, and depth. Preliminary results for head-of-reservoir conditions and the influence of temperature curtains modeled with W2 will be presented. Study findings may assist in formulation of juvenile fish passage alternatives for Shasta Lake.

Juvenile Radio-Tag Study: Lower Granite Dam, 1985 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stuehrenberg, Lowell C.

The concept of using mass releases of juvenile radio tags represents a new and potentially powerful research tool that could be effectively applied to juvenile salmonid passage problems at dams on the Columbia and Snake Rivers. A system of detector antennas, strategically located, would automatically detect and record individually tagged juvenile salmonids as they pass through the spillway, powerhouse, bypass system, or tailrace areas below the dam. Accurate measurements of spill effectiveness, fish guiding efficiency (FGE), collection efficiency (CE), spillway survival, powerhouse survival, and bypass survival would be possible without handling large numbers of unmarked fish. A prototype juvenile radio-tagmore » system was developed and tested by the National Marine Fisheries Service (NMFS) and Bonneville Power Administration (BPA) at John Day Dam and at Lower Granite Dam. This report summarizes research to: (1) evaluate the effectiveness of the prototype juvenile radio-tag system in a field situation and (2) to test the basic assumptions inherent in using the juvenile radio tag as a research tool.« less

Nez Perce Tribal Hatchery Program : Draft Environmental Impact Statement.

DOE Office of Scientific and Technical Information (OSTI.GOV)

United States. Bonneville Power Administration; Nez Perce Tribal Hatchery

1996-06-01

Bonneville Power Administration, the Bureau of Indian Affairs, the Nez Perce Tribe propose a supplementation program to restore chinook salmon to the Clearwater River Subbasin in Idaho. The Clearwater River is a tributary to the Snake River, which empties into the Columbia River. The Nez Perce Tribe would build and operate two central incubation and rearing hatcheries and six satellite facilities. Spring, summer and fall chinook salmon would be reared and acclimated to different areas in the Subbasin and released at the hatchery and satellite sites or in other watercourses throughout the Subbasin. The supplementation program differs from other hatcherymore » programs because the fish would be released at different sizes and would return to reproduce naturally in the areas where they are released. Several environmental issues were identified during scoping: the possibility that the project would fail if mainstem Columbia River juvenile and adult passage problems are not solved; genetic risks to fish listed as endangered or threatened; potential impacts to wild and resident fish stocks because of increase competition for food and space; and water quality. The Proposed Action would affect several important aspects of Nez Perce tribal life, primarily salmon harvest, employment, and fisheries management.« less

Sign changes as a universal concept in first-passage-time calculations

NASA Astrophysics Data System (ADS)

Braun, Wilhelm; Thul, Rüdiger

2017-01-01

First-passage-time problems are ubiquitous across many fields of study, including transport processes in semiconductors and biological synapses, evolutionary game theory and percolation. Despite their prominence, first-passage-time calculations have proven to be particularly challenging. Analytical results to date have often been obtained under strong conditions, leaving most of the exploration of first-passage-time problems to direct numerical computations. Here we present an analytical approach that allows the derivation of first-passage-time distributions for the wide class of nondifferentiable Gaussian processes. We demonstrate that the concept of sign changes naturally generalizes the common practice of counting crossings to determine first-passage events. Our method works across a wide range of time-dependent boundaries and noise strengths, thus alleviating common hurdles in first-passage-time calculations.

Sensor Fish Communicator

DOE Office of Scientific and Technical Information (OSTI.GOV)

The Sensor Fish collects information that can be used to evaluate conditions encountered by juvenile salmonids and other fish as they pass through hydroelectric dams on their way to the ocean. Sensor Fish are deployed in turbines, spillways, and sluiceways and measure changes in pressure, angular rate of change, and linear acceleration during passage. The software is need to make Sensor Fish fully functional and easy to use. Sensor Fish Communicator (SFC) links to Sensor Fish, allowing users to control data collection settings and download data. It may also be used to convert native raw data (.raw2) files into Commamore » Separated Variable (.csv) files and plot the results. The multiple capabilities of the SFC allow hardware communication, data conversion, and data plotting with one application.« less

Environmental Effects of Hydrokinetic Turbines on Fish: Desktop and Laboratory Flume Studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jacobson, Paul T.; Amaral, Stephen V.; Castro-Santos, Theodore

This collection of three reports describes desktop and laboratory flume studies that provide information to support assessment of the potential for injury and mortality of fish that encounter hydrokinetic turbines of various designs installed in tidal and river environments. Behavioral responses to turbine exposure also are investigated to support assessment of the potential for disruptions to upstream and downstream movements of fish. The studies: (1) conducted an assessment of potential injury mechanisms using available data from studies with conventional hydro turbines; (2) developed theoretical models for predicting blade strike probabilities and mortality rates; and (3) performed flume testing with threemore » turbine designs and several fish species and size groups in two laboratory flumes to estimate survival rates and document fish behavior. The project yielded three reports which this document comprises. The three constituent documents are addressed individually below Fish Passage Through Turbines: Application of Conventional Hydropower Data to Hydrokinetic Technologies Fish passing through the blade sweep of a hydrokinetic turbine experience a much less harsh physical environment than do fish entrained through conventional hydro turbines. The design and operation of conventional turbines results in high flow velocities, abrupt changes in flow direction, relatively high runner rotational and blade speeds, rapid and significant changes in pressure, and the need for various structures throughout the turbine passageway that can be impacted by fish. These conditions generally do not occur or are not significant factors for hydrokinetic turbines. Furthermore, compared to conventional hydro turbines, hydrokinetic turbines typically produce relatively minor changes in shear, turbulence, and pressure levels from ambient conditions in the surrounding environment. Injuries and mortality from mechanical injuries will be less as well, mainly due to low rotational speeds and strike velocities, and an absence of structures that can lead to grinding or abrasion injuries. Additional information is needed to rigorously assess the nature and magnitude of effects on individuals and populations, and to refine criteria for design of more fish-friendly hydrokinetic turbines. Evaluation of Fish Injury and Mortality Associated with Hydrokinetic Turbines Flume studies exposed fish to two hydrokinetic turbine designs to determine injury and survival rates and to assess behavioral responses. Also, a theoretical model developed for predicting strike probability and mortality of fish passing through conventional hydro turbines was adapted for use with hydrokinetic turbines and applied to the two designs evaluated during flume studies. The flume tests were conducted with the Lucid spherical turbine (LST), a Darrieus-type (cross flow) turbine, and the Welka UPG, an axial flow propeller turbine. Survival rates for rainbow trout tested with the LST were greater than 98% for both size groups and approach velocities evaluated. Turbine passage survival rates for rainbow trout and largemouth bass tested with the Welka UPG were greater than 99% for both size groups and velocities evaluated. Injury rates of turbine-exposed fish were low with both turbines and generally comparable to control fish. Video observations of the LST demonstrated active avoidance of turbine passage by a large proportion fish despite being released about 25 cm upstream of the turbine blade sweep. Video observations from behavior trials indicated few if any fish pass through the turbines when released farther upstream. The theoretical predictions for the LST indicated that strike mortality would begin to occur at an ambient current velocity of about 1.7 m/s for fish with lengths greater than the thickness of the leading edge of the blades. As current velocities increase above 1.7 m/s, survival was predicted to decrease for fish passing through the LST, but generally remained high (greater than 90%) for fish less than 200 mm in length. Strike mortality was not predicted to occur during passage through a Welka UPG turbine at ambient current velocities less than about 2.5 m/s. Survival and Behavior of Juvenile Atlantic Salmon and Adult American Shad on Exposure to a Hydrokinetic Turbine This report describes a series of experiments designed to measure the effect of exposure to a full-scale, vertical axis hydrokinetic turbine on downstream migrating juvenile Atlantic salmon and upstream migrating adult American shad. Studies were performed in a large-scale, open-channel flume, and all individuals approached the turbine under volitional control. No injuries were observed, and there was no measurable increase in mortality associated with turbine passage. Exposure to the turbine elicited behavioral responses from both species, however, with salmon passing primarily over the downrunning blades. Shad movement was impeded in the presence of the device, as indicated by fewer attempts of shorter duration and reduced distance of ascent up the flume. More work should be performed in both laboratory and field conditions to determine the extent to which observed effects are likely to influence fish in riverine environments. Analysis is needed to assess the potential for multiple units to lead to greater mortality rates or impacts on fish movements and migrations. Additionally, future research should focus on expanding the existing data by developing better estimates of encounter and avoidance probabilities.« less

75 FR 5626 - Cle Elum Dam Fish Passage Facilities and Fish Reintroduction Project; Kittitas County, WA INT-DES...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-03

... of Availability of the Draft Environmental Impact Statement (Draft EIS) and Announcement of Public..., cultural, and socioeconomic effects of the proposed alternatives. DATES: Written comments on the Draft EIS will be accepted through March 22, 2010. A public information meeting will be held from 5 p.m. to 7 p.m...

Possibilities of fish passage through the block ramp: Model-based estimation of permeability.

PubMed

Plesiński, Karol; Bylak, Aneta; Radecki-Pawlik, Artur; Mikołajczyk, Tomasz; Kukuła, Krzysztof

2018-08-01

Block ramps offer an opportunity to combine hydrotechnical structures with fish passages. The primary study objective was to evaluate the effectiveness of a block ramp for upstream fish movement in a mountain stream. Geodetic measurements of the bottom surface and water level were taken for three cross-sections. The description of the geometric and hydrodynamic parameters of the block ramp was supplemented with information on the width and length of crevices between boulders. Measurements of the geometric and hydrodynamic parameters of the block ramp were performed at 76 measurement sites, at three different types of discharge. Ichthyological data were collected in the analyzed stream. Measurements covered among others total length, width, and height of caught fish. Salmonid, cottid, balitorid, and cyprinid fish were studied. The determination of the main effects of the geometric and hydrodynamic parameters of the block ramp on the possibilities of use by target fish species employed generalized linear models (GLMs). The study shows that the block ramp cannot provide longitudinal connectivity and migration of fish occurring in the mountain stream. According to estimates, the block ramp did not meet the permeability expectations. The reason for low usefulness of the ramp for fish is particularly excessively strong water current. The stream concentration constituted an unsurmountable velocity barrier for fish moving upstream for each of the analyzed discharges. The developed model suggests that some crevices in the side zones of the ramp could be parts of the migration corridor, but only for small and medium-sized fish. At medium and high water stages, movement of fish in crevices was difficult due to fast water current, and at low and very low discharges, some crevices lost their permeability, and could become ecological traps for fish. The necessity of estimation of ramp permeability during pre-construction phase was emphasized. Copyright © 2018 Elsevier B.V. All rights reserved.

Effects of Iron Gate Dam discharge and other factors on the survival and migration of juvenile coho salmon in the lower Klamath River, northern California, 2006-09

USGS Publications Warehouse

Beeman, John; Juhnke, Steven; Stutzer, Greg; Wright, Katrina

2012-01-01

Current management of the Klamath River includes prescribed minimum discharges intended partly to increase survival of juvenile coho salmon during their seaward migration in the spring. To determine if fish survival was related to river discharge, we estimated apparent survival and migration rates of yearling coho salmon in the Klamath River downstream of Iron Gate Dam. The primary goals were to determine if discharge at Iron Gate Dam affected coho salmon survival and if results from hatchery fish could be used as a surrogate for the limited supply of wild fish. Fish from hatchery and wild origins that had been surgically implanted with radio transmitters were released into the Klamath River slightly downstream of Iron Gate Dam at river kilometer 309. Tagged fish were used to estimate apparent survival between, and passage rates at, a series of detection sites as far downstream as river kilometer 33. Conclusions were based primarily on data from hatchery fish, because wild fish were only available in 2 of the 4 years of study. Based on an information-theoretic approach, apparent survival of hatchery and wild fish was similar, despite differences in passage rates and timing, and was lowest in the 54 kilometer (km) reach between release and the Scott River. Models representing the hypothesis that a short-term tagging- or handling-related mortality occurred following release were moderately supported by data from wild fish and weakly supported by data from hatchery fish. Estimates of apparent survival of hatchery fish through the 276 km study area ranged from 0.412 (standard error [SE] 0.048) to 0.648 (SE 0.070), depending on the year, and represented an average of 0.790 per 100 km traveled. Estimates of apparent survival of wild fish through the study area were 0.645 (SE 0.058) in 2006 and 0.630 (SE 0.059) in 2009 and were nearly identical to the results from hatchery fish released on the same dates. The data and models examined supported positive effects of water temperature, river discharge, and fish weight as factors affecting apparent survival in the Klamath River upstream of the confluence with the Shasta River, but few of the variables examined were supported as factors affecting survival farther downstream. The effect of water temperature on apparent survival upstream of the Shasta River was greater than Iron Gate Dam discharge, which was greater than fish weight. The estimated effect on apparent survival between release and the Shasta River with each 1degree Celsius increase in water temperature was 1.4 times the effect of a 100 cubic feet per second increase in Iron Gate Dam discharge and 2.5 times the effect of a 1 gram increase in fish weight, and the effects of discharge and weight diminished at higher water temperatures up to the 17.91 degrees Celsius maximum present in the data examined. The rate of passage at the detection site near the confluence with the Shasta River was primarily affected by date of release, and water temperature was the only factor supported at the site near the confluence with the Scott River. Passage rates at sites downstream of the Scott River were affected by several of the variables examined, but the estimated effects were small and often imprecise. Results from this study indicate that discharge at Iron Gate Dam has a positive effect on apparent survival of yearling coho salmon in the Klamath River upstream of the Shasta River, but the effects are smaller than those of water temperature and are mediated by it. The results also support the use of hatchery fish as surrogates for wild fish in studies of apparent survival, but the available evidence suggests that study fish should be released well upstream of the area of interest, due to short-term differences in survival and migration behavior of hatchery and wild fish after release.

A New Multibeam Sonar Technique for Evaluating Fine-Scale Fish Behavior Near Hydroelectric Dam Guidance Structures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Robert L.; Simmons, Mary Ann; Simmons, Carver S.

2002-03-07

This book chapter describes a Dual-Head Multibeam Sonar (DHMS) system developed by Battelle and deployed at two dam sites on the Snake and Columbia rivers in Washington State to evaluate the fine-scale (

Evaluating the effectiveness of restoring longitudinal connectivity for stream fish communities: towards a more holistic approach.

PubMed

Tummers, Jeroen S; Hudson, Steve; Lucas, Martyn C

2016-11-01

A more holistic approach towards testing longitudinal connectivity restoration is needed in order to establish that intended ecological functions of such restoration are achieved. We illustrate the use of a multi-method scheme to evaluate the effectiveness of 'nature-like' connectivity restoration for stream fish communities in the River Deerness, NE England. Electric-fishing, capture-mark-recapture, PIT telemetry and radio-telemetry were used to measure fish community composition, dispersal, fishway efficiency and upstream migration respectively. For measuring passage and dispersal, our rationale was to evaluate a wide size range of strong swimmers (exemplified by brown trout Salmo trutta) and weak swimmers (exemplified by bullhead Cottus perifretum) in situ in the stream ecosystem. Radio-tracking of adult trout during the spawning migration showed that passage efficiency at each of five connectivity-restored sites was 81.3-100%. Unaltered (experimental control) structures on the migration route had a bottle-neck effect on upstream migration, especially during low flows. However, even during low flows, displaced PIT tagged juvenile trout (total n=153) exhibited a passage efficiency of 70.1-93.1% at two nature-like passes. In mark-recapture experiments juvenile brown trout and bullhead tagged (total n=5303) succeeded in dispersing upstream more often at most structures following obstacle modification, but not at the two control sites, based on a Laplace kernel modelling approach of observed dispersal distance and barrier traverses. Medium-term post-restoration data (2-3years) showed that the fish assemblage remained similar at five of six connectivity-restored sites and two control sites, but at one connectivity-restored headwater site previously inhabited by trout only, three native non-salmonid species colonized. We conclude that stream habitat reconnection should support free movement of a wide range of species and life stages, wherever retention of such obstacles is not needed to manage non-native invasive species. Evaluation of the effectiveness of fish community restoration in degraded streams benefits from a similarly holistic approach. Copyright © 2016 Elsevier B.V. All rights reserved.

Estimating reach-specific fish movement probabilities in rivers with a Bayesian state-space model: application to sea lamprey passage and capture at dams

USGS Publications Warehouse

Holbrook, Christopher M.; Johnson, Nicholas S.; Steibel, Juan P.; Twohey, Michael B.; Binder, Thomas R.; Krueger, Charles C.; Jones, Michael L.

2014-01-01

Improved methods are needed to evaluate barriers and traps for control and assessment of invasive sea lamprey (Petromyzon marinus) in the Great Lakes. A Bayesian state-space model provided reach-specific probabilities of movement, including trap capture and dam passage, for 148 acoustic tagged invasive sea lamprey in the lower Cheboygan River, Michigan, a tributary to Lake Huron. Reach-specific movement probabilities were combined to obtain estimates of spatial distribution and abundance needed to evaluate a barrier and trap complex for sea lamprey control and assessment. Of an estimated 21 828 – 29 300 adult sea lampreys in the river, 0%–2%, or 0–514 untagged lampreys, could have passed upstream of the dam, and 46%–61% were caught in the trap. Although no tagged lampreys passed above the dam (0/148), our sample size was not sufficient to consider the lock and dam a complete barrier to sea lamprey. Results also showed that existing traps are in good locations because 83%–96% of the population was vulnerable to existing traps. However, only 52%–69% of lampreys vulnerable to traps were caught, suggesting that traps can be improved. The approach used in this study was a novel use of Bayesian state-space models that may have broader applications, including evaluation of barriers for other invasive species (e.g., Asian carp (Hypophthalmichthys spp.)) and fish passage structures for other diadromous fishes.

Fall Chinook Salmon Survival and Supplementation Studies in the Snake River and Lower Snake River Reservoirs, 1995 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Williams, John G.; Bjomn

1997-03-01

In 1994, the National Marine Fisheries Service and the US Fish and Wildlife Service began a cooperative study to investigate migrational characteristics of subyearling fall chinook salmon in the Snake River. The primary study objectives were to (1) determine the feasibility of estimating detection and passage survival probabilities of natural and hatchery subyearling fall chinook salmon released in the Snake River (Chapter 1), (2) investigate relationships between detection and passage survival probabilities and travel time of subyearling fall chinook salmon and environmental influences such as flow volume and water temperature (Chapter 1), (3) monitor and evaluate dispersal of hatchery subyearlingmore » chinook salmon into nearshore rearing areas used by natural fish (Chapter 2), and (4) monitor and evaluate travel time to Lower Granite Dam, growth from release in the Snake River to recapture at Lower Granite Dam, ATPase levels of fish recaptured at Lower Granite Dam, and survival from release in the free-flowing Snake River to the tailrace of Lower Granite Dam (Chapter 2).« less

A Cabled Acoustic Telemetry System for Detecting and Tracking Juvenile Salmon: Part 1. Engineering Design and Instrumentation

PubMed Central

Weiland, Mark A.; Deng, Z. Daniel; Seim, Tom A.; LaMarche, Brian L.; Choi, Eric Y.; Fu, Tao; Carlson, Thomas J.; Thronas, Aaron I.; Eppard, M. Brad

2011-01-01

In 2001 the U.S. Army Corps of Engineers, Portland District (OR, USA), started developing the Juvenile Salmon Acoustic Telemetry System, a nonproprietary sensing technology, to meet the needs for monitoring the survival of juvenile salmonids through eight large hydroelectric facilities within the Federal Columbia River Power System (FCRPS). Initial development focused on coded acoustic microtransmitters and autonomous receivers that could be deployed in open reaches of the river for detection of the juvenile salmonids implanted with microtransmitters as they passed the autonomous receiver arrays. In 2006, the Pacific Northwest National Laboratory began the development of an acoustic receiver system for deployment at hydropower facilities (cabled receiver) for detecting fish tagged with microtransmitters as well as tracking them in two or three dimensions for determining route of passage and behavior as the fish passed at the facility. The additional information on route of passage, combined with survival estimates, is used by the dam operators and managers to make structural and operational changes at the hydropower facilities to improve survival of fish as they pass the facilities through the FCRPS. PMID:22163918

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Hennen, Matthew J.; Zimmerman, Shon A.

The study reported herein was conducted by the Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) for the U.S. Army Corps of Engineers, Portland District (USACE). The PNNL and UW project managers were Drs. Thomas J. Carlson and John R. Skalski, respectively. The USACE technical lead was Mr. Brad Eppard. The study was designed to estimate dam passage survival and other performance measures at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System Biological Opinion (BiOp) and the 2008 Columbia Basin Fish Accords. The study is being documented in two types of reports:more » compliance and technical. A compliance report is delivered within 6 months of the completion of the field season and focuses on results of the performance metrics outlined in the 2008 BiOp and Fish Accords. A technical report is produced within the 18 months after field work, providing comprehensive documentation of a given study and results on route-specific survival estimates and fish passage distributions, which are not included in compliance reports. This technical report concerns the 2011 acoustic telemetry study at The Dalles Dam.« less

Reinforcement and validation of the analyses and conclusions related to fishway evaluation data from Bunt et al.: ‘Performance of fish passage structures at upstream barriers to migration’

USGS Publications Warehouse

Bunt, C.M.; Castro-Santos, Theodore R.; Haro, Alexander

2016-01-01

Detailed re-examination of the datasets that were used for a meta-analysis of fishway attraction and passage revealed a number of errors that we addressed and corrected. We subsequently re-analysed the revised dataset, and results showed no significant changes in the primary conclusions of the original study; for most species, effective performance cannot be assured for any fishway type.

Bonneville First Powerhouse ERDC Turbine Operating Range Investigation

DTIC Science & Technology

2017-05-01

the target operating range for minimizing turbine effects on fish passing through the B1 powerhouse. Relative effects of blade contact, shear, stay...This includes operation within and beyond the current 1% operating zone. Results from these model investigations indicate that that steeper blade ...angles (BAs) (if operated at peak efficiency for that subject blade angle) provide for better passage conditions for fish. Fewer severe contacts with the

Snake River Sockeye Salmon (Oncorhynchus Nerka) Habitat/Limnologic Research : Annual Report 1992.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Spaulding, Scott

1993-05-01

This report outlines long-term planning and monitoring activities that occurred in 1991 and 1992 in the Stanley Basin Lakes of the upper Salmon River, Idaho for the purpose of sockeye salmon nerka) recovery. Limnological monitoring and experimental sampling protocol, designed to establish a limnological baseline and to evaluate sockeye salmon production capability of the lakes, are presented. Also presented are recommended passage improvements for current fish passage barriers/impediments on migratory routes to the lakes. We initiated O. nerka population evaluations for Redfish and Alturas lakes; this included population estimates of emerging kokanee fry entering each lake in the spring andmore » adult kokanee spawning surveys in tributary streams during the fall. Gill net evaluations of Alturas, Pettit, and Stanley lakes were done in September, 1992 to assess the relative abundance of fish species among the Stanley Basin lakes. Fish population data will be used to predict sockeye salmon production potential within a lake, as well as a baseline to monitor long-term fish community changes as a result of sockeye salmon recovery activities. Also included is a paper that reviews sockeye salmon enhancement activities in British Columbia and Alaska and recommends strategies for the release of age-0 sockeye salmon that will be produced from the current captive broodstock.« less

The monitoring of eco-hydrological parameters within the LIFE Ljubljanica Connects project

NASA Astrophysics Data System (ADS)

Sapač, Klaudija; Šraj, Mojca; Zabret, Katarina; Brilly, Mitja; Vidmar, Andrej

2016-04-01

The main objectives of the Ljubljanica Connects project arising from the need to improve the living conditions in the Ljubljanica River for endangered fish species. The history of improving the conditions dates back more than 100 years ago with the construction of fish passages at the obstacles on the Ljubljanica River. As part of the project the fish passages were reconstructed and upgraded to improve river connectivity. But for the survival of fish and other aquatic organisms in the river also adequate living conditions are necessary which can be determined by measurements of individual parameters of water quality. Within the LIFE Ljubljanica Connects project we have established continuous eco-hydrological monitoring of water level and temperature at 17 measuring sites and concentration of dissolved oxygen at 3 measuring sites along the Ljubljanica River and its tributaries. Water level data are input data for the hydrological model of Ljubljanica River, while water temperature and concentration of dissolved oxygen are the basic indicators of the quality of the water. The purpose of this paper is to present the measuring equipment of eco-hydrological monitoring, the first feedback on the results of measured water temperature and the concentration of dissolved oxygen in the Ljubljanica River, and the advantages and importance of such monitoring.

A Preliminary Assessment of Barotrauma Injuries and Acclimation Studies for Three Fish Species

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Walker, Ricardo W.; Stephenson, John R.

Fish that pass hydro structures either through turbine passage, deep spill, or other deep pathways can experience rapid decreases in pressure that can result in barotrauma. In addition to morphology and physiology of the fish’s swim bladder, the severity of barotrauma is directly related to the volume of undissolved gas in fish prior to rapid decompression and the lowest pressure the fish experience as they pass hydro structures (termed the “nadir”). The volume of undissolved gas in fish is influenced by the depth of acclimation (the pressure at which the fish is neutrally buoyant); therefore, determining the depth where fishmore » are neutrally buoyant is a critical precursor to determining the relationship between pressure changes and injury or mortality.« less

Yakima River Radio-Telemetry Study: Spring Chinook Salmon, 1991-1992 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hockersmith, Eric

1994-09-01

As part of the presupplementation planning, baseline data on the productivity of spring chinook salmon (Oncorhynchus tshawytscha) in the Yakima River have been collected. However, for adult salmonids, data on habitat use, delays in passage at irrigation diversions, migration rates, and substock separation had not been previously collected. In 1991, the National Marine Fisheries Service began a 2-year radio-telemetry study of adult spring chinook salmon in the Yakima River Basin. Specific objectives addressed in this study were: to determine spawning populations` run timing, passage patterns at irrigation diversion dams, and morphometric characteristics to determine where and when substocks become separated;more » to evaluate fish passage at Yakima River Basin diversion dams including Prosser, Sunnyside, Wapato, Roza, Town Diversion, Easton, Cowiche, and Wapatox Dams; to determine spring chinook salmon migration rates between Yakima River Basin dams, prespawning behavior, temporal distribution, and habitat utilization; to identify spawning distribution and timing of spring chinook salmon; to determine the amount and cause of prespawning mortality of spring chinook salmon; and to evaluate adult fish-handling procedures for the right-bank, adult-trapping facility at Prosser Dam.« less

Nonanadromous fish passage in highway culverts.

DOT National Transportation Integrated Search

1995-01-01

Highway culverts may hinder the normal migrations of various trout species in wild trout streams, due to increased flow velocity, shallow water depths, increased turbulence, and perching. This can impede migrational movements, affecting the genetic d...

75 FR 25217 - Intent To Prepare an Environmental Impact Statement for Northwest Aggregates' Previously...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-07

... Loading Facility in East Passage of Puget Sound on the Southeast Shoreline of Maury Island, King County... marine environment, including Chinook salmon, Southern Resident Killer whales, and forage fish...

Laboratory Experiments on the Effects of Blade Strike from Hydrokinetic Energy Technologies on Larval and Juvenile Freshwater Fishes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schweizer, Peter E; Cada, Glenn F; Bevelhimer, Mark S

2012-03-01

There is considerable interest in the development of marine and hydrokinetic energy projects in rivers, estuaries, and coastal ocean waters of the United States. Hydrokinetic (HK) technologies convert the energy of moving water in river or tidal currents into electricity, without the impacts of dams and impoundments associated with conventional hydropower or the extraction and combustion of fossil fuels. The Federal Energy Regulatory Commission (FERC) maintains a database that displays the geographical distribution of proposed HK projects in inland and tidal waters (FERC 2012). As of March 2012, 77 preliminary permits had been issued to private developers to study HKmore » projects in inland waters, the development of which would total over 8,000 MW. Most of these projects are proposed for the lower Mississippi River. In addition, the issuance of another 27 preliminary permits for HK projects in inland waters, and 3 preliminary permits for HK tidal projects (totaling over 3,100 MW) were under consideration by FERC. Although numerous HK designs are under development (see DOE 2009 for a description of the technologies and their potential environmental effects), the most commonly proposed current-based projects entail arrays of rotating devices, much like submerged wind turbines, that are positioned in the high-velocity (high energy) river channels. The many diverse HK designs imply a diversity of environmental impacts, but a potential impact common to most is the risk for blade strike to aquatic organisms. In conventional hydropower generation, research on fish passage through reaction turbines at low-head dams suggested that strike and mortality for small fish could be low. As a consequence of the large surface area to mass ratio of small fish, the drag forces in the boundary layer flow at the surface of a rotor blade may pull small fish around the leading edge of a rotor blade without making physical contact (Turnpenny 1998, Turnpenny et al. 2000). Although there is concern that small, fragile fish early life stages may be unable to avoid being struck by the blades of hydrokinetic turbines, we found no empirical data in the published literature that document survival of earliest life-stage fish in passage by rotor blades. In addition to blade strike, research on passage of fish through conventional hydropower turbines suggested that fish mortalities from passage through the rotor swept area could also occur due to shear stresses and pressure chances in the water column (Cada et al. 1997, Turnpenny 1998). However, for most of the proposed HK turbine designs the rotors are projected to operate a lower RPM (revolutions per minute) than observed from conventional reaction turbines; the associated shear stress and pressure changes are expected to be lower and pose a smaller threat to fish survival (DOE 2009). Only a limited number of studies have been conducted to examine the risk of blade strike from hydrokinetic technologies to fish (Turnpenny et al. 1992, Normandeau et al. 2009, Seitz et al. 2011, EPRI 2011); the survival of drifting or weakly swimming fish (especially early life stages) that encounter rotor blades from hydrokinetic (HK) devices is currently unknown. Our study addressed this knowledge gap by testing how fish larvae and juveniles encountered different blade profiles of hydrokinetic devices and how such encounters influenced survivorship. We carried out a laboratory study designed to improve our understanding of how fish larvae and juvenile fish may be affected by encounters with rotor blades from HK turbines in the water column of river and ocean currents. (For convenience, these early life stages will be referred to as young of the year, YOY). The experiments developed information needed to quantify the risk (both probability and consequences) of rotor-blade strike to YOY fish. In particular, this study attempted to determine whether YOY drifting in a high-velocity flow directly in the path of the blade leading edge will make contact with the rotor blade or will bypass the blade while entrained in the boundary layer of water flowing over the blade surface. The study quantified both immediate and delayed mortalities (observed immediately, 3 hours, and 24 hours after encountering the blade) among freshwater YOY fish resulting from contact with the blade or turbulent flows in the wake of the blade.« less

Dispersal Limitations on Fish Community Recovery Following Long-term Water Quality Remediation

DOE PAGES

McManamay, Ryan A.; Jett, Robert T.; Ryon, Michael G.; ...

2016-02-22

Holistic restoration approaches, such as water quality remediation, are likely to meet conservation objectives because they are typically implemented at watershed scales, as opposed to individual stream reaches. However, habitat fragmentation may impose constraints on the ecological effectiveness of holistic restoration strategies by limiting colonization following remediation. We questioned the importance of dispersal limitations to fish community recovery following long-term water quality remediation and species reintroductions across the White Oak Creek (WOC) watershed near Oak Ridge, Tennessee (USA). Long-term (26 years) responses in fish species richness and biomass to water quality remediation were evaluated in light of habitat fragmentation andmore » population isolation from instream barriers, which varied in their passage potential. In addition, ordination techniques were used to determine the relative importance of habitat connectivity and water quality, in explaining variation fish communities relative to environmental fluctuations, i.e. streamflow. Ecological recovery (changes in richness) at each site was negatively related to barrier index, a measure of community isolation by barriers relative to stream distance. Following species reintroductions, dispersal by fish species was consistently in the downstream direction and upstream passage above barriers was non-existent. The importance of barrier index in explaining variation in fish communities was stronger during higher flow conditions, but decreased over time an indication of increasing community stability and loss of seasonal migrants. Compared to habitat fragmentation, existing water quality concerns (i.e., outfalls, point source discharges) were unrelated to ecological recovery, but explained relatively high variation in community dynamics. Our results suggest that habitat fragmentation limited the ecological effectiveness of intensive water quality remediation efforts and fish reintroduction efforts by impeding recolonization at isolated stream reaches.« less

Dispersal Limitations on Fish Community Recovery Following Long-term Water Quality Remediation

DOE Office of Scientific and Technical Information (OSTI.GOV)

McManamay, Ryan A.; Jett, Robert T.; Ryon, Michael G.

Holistic restoration approaches, such as water quality remediation, are likely to meet conservation objectives because they are typically implemented at watershed scales, as opposed to individual stream reaches. However, habitat fragmentation may impose constraints on the ecological effectiveness of holistic restoration strategies by limiting colonization following remediation. We questioned the importance of dispersal limitations to fish community recovery following long-term water quality remediation and species reintroductions across the White Oak Creek (WOC) watershed near Oak Ridge, Tennessee (USA). Long-term (26 years) responses in fish species richness and biomass to water quality remediation were evaluated in light of habitat fragmentation andmore » population isolation from instream barriers, which varied in their passage potential. In addition, ordination techniques were used to determine the relative importance of habitat connectivity and water quality, in explaining variation fish communities relative to environmental fluctuations, i.e. streamflow. Ecological recovery (changes in richness) at each site was negatively related to barrier index, a measure of community isolation by barriers relative to stream distance. Following species reintroductions, dispersal by fish species was consistently in the downstream direction and upstream passage above barriers was non-existent. The importance of barrier index in explaining variation in fish communities was stronger during higher flow conditions, but decreased over time an indication of increasing community stability and loss of seasonal migrants. Compared to habitat fragmentation, existing water quality concerns (i.e., outfalls, point source discharges) were unrelated to ecological recovery, but explained relatively high variation in community dynamics. Our results suggest that habitat fragmentation limited the ecological effectiveness of intensive water quality remediation efforts and fish reintroduction efforts by impeding recolonization at isolated stream reaches.« less

Field trial of a Doppler sonar system for fisheries applications

NASA Astrophysics Data System (ADS)

Tollefsen, Cristina D. S.; Zedel, Len

2003-10-01

Various deployments of commercial Doppler current profiling systems have demonstrated that these instruments can detect fish and measure their swimming speeds. However, research into the possible application of Doppler sonar to fisheries problems is limited and has not taken advantage of coherent signal processing schemes. A field trial was undertaken in August 2002 to explore the capabilities of a coherent Doppler sonar when applied to detecting discrete targets. The passage of migrating salmon on the Fraser River in British Columbia provided an ideal test opportunity with fish of well-defined swimming behavior and allowed for comparisons with conventional fisheries acoustics techniques. The instrument tested was a 250-kHz sonar which provided for phase coding of transmit pulses and coherent sampling of successive acoustic returns. The field trial resulted in 11 consecutive days of Doppler sonar data acquired during the peak of the sockeye salmon (Oncorhynchus nerka) migration. A total of 7425 individual fish were identified and their swimming speed was measured with an accuracy of between 10 cms-1 and 20 cms-1, which depended on pulse length, pulse spacing, and target range. By comparison, water velocity measurements made with the same instrument can only achieve a theoretical accuracy of 60 cms-1.

Assessing hydraulic conditions through Francis turbines using an autonomous sensor device

DOE PAGES

Fu, Tao; Deng, Zhiqun Daniel; Duncan, Joanne P.; ...

2016-08-19

Downstream migratory fish, including some endangered species, can be injured or killed during turbine passage. In this study an autonomous Sensor Fish device was deployed at Arrowrock Dam, Cougar Dam, and Detroit Dam to evaluate the hydraulic conditions and physical stresses that fish experienced when passing through these Francis turbines. Pressure data was used to identify the location of the Sensor Fish and to calculate the nadir pressure and the magnitude and the rate of change in pressure during turbine passage. Acceleration data was used to identify events (collisions or shear) Sensor Fish experienced and to categorize the severity levelmore » (severe, medium, and slight) of each event. The results showed that Sensor Fish experienced severe events mostly in the stay vane/wicket gate region and the runner region. In the stay vane/wicket gate region, almost all severe events were collisions. In the runner region, Sensor fish experienced both severe collisions and severe shear events. Sensor Fish data at three wicket gate opening treatments at Cougar Dam indicated that the wicket gate opening of the Francis turbine can affect the hydraulic conditions in the turbine runner region. Fewer Sensor Fish experienced severe collisions in the turbine runner region at the peak efficiency than at the minimum opening and the maximum opening treatments. Comparisons between the Francis turbines at the three dams and the AHT Kaplan turbine at Wanapum Dam showed that higher percentage of Sensor Fish experienced severe events in the runner region when passing through Francis turbines than the AHT Kaplan turbine. The nadir pressures of the Francis turbines were lower than those of the AHT Kaplan turbine at Wanapum Dam. Both the magnitude and the rate of change in pressure were higher in Francis turbines than in the AHT Kaplan turbine at Wanapum Dam in the runner region. This study can be used to guide future laboratory studies of fish passing through Francis turbine and help the design of more fish-friendly turbines for new hydroelectric dams or the rehabilitations of existing dams.« less

Assessing hydraulic conditions through Francis turbines using an autonomous sensor device

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fu, Tao; Deng, Zhiqun Daniel; Duncan, Joanne P.

Downstream migratory fish, including some endangered species, can be injured or killed during turbine passage. In this study an autonomous Sensor Fish device was deployed at Arrowrock Dam, Cougar Dam, and Detroit Dam to evaluate the hydraulic conditions and physical stresses that fish experienced when passing through these Francis turbines. Pressure data was used to identify the location of the Sensor Fish and to calculate the nadir pressure and the magnitude and the rate of change in pressure during turbine passage. Acceleration data was used to identify events (collisions or shear) Sensor Fish experienced and to categorize the severity levelmore » (severe, medium, and slight) of each event. The results showed that Sensor Fish experienced severe events mostly in the stay vane/wicket gate region and the runner region. In the stay vane/wicket gate region, almost all severe events were collisions. In the runner region, Sensor fish experienced both severe collisions and severe shear events. Sensor Fish data at three wicket gate opening treatments at Cougar Dam indicated that the wicket gate opening of the Francis turbine can affect the hydraulic conditions in the turbine runner region. Fewer Sensor Fish experienced severe collisions in the turbine runner region at the peak efficiency than at the minimum opening and the maximum opening treatments. Comparisons between the Francis turbines at the three dams and the AHT Kaplan turbine at Wanapum Dam showed that higher percentage of Sensor Fish experienced severe events in the runner region when passing through Francis turbines than the AHT Kaplan turbine. The nadir pressures of the Francis turbines were lower than those of the AHT Kaplan turbine at Wanapum Dam. Both the magnitude and the rate of change in pressure were higher in Francis turbines than in the AHT Kaplan turbine at Wanapum Dam in the runner region. This study can be used to guide future laboratory studies of fish passing through Francis turbine and help the design of more fish-friendly turbines for new hydroelectric dams or the rehabilitations of existing dams.« less

Fish Passage though Hydropower Turbines: Simulating Blade Strike using the Discrete Element Method

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richmond, Marshall C.; Romero Gomez, Pedro DJ

mong the hazardous hydraulic conditions affecting anadromous and resident fish during their passage though turbine flows, two are believed to cause considerable injury and mortality: collision on moving blades and decompression. Several methods are currently available to evaluate these stressors in installed turbines, i.e. using live fish or autonomous sensor devices, and in reduced-scale physical models, i.e. registering collisions from plastic beads. However, a priori estimates with computational modeling approaches applied early in the process of turbine design can facilitate the development of fish-friendly turbines. In the present study, we evaluated the frequency of blade strike and nadir pressure environmentmore » by modeling potential fish trajectories with the Discrete Element Method (DEM) applied to fish-like composite particles. In the DEM approach, particles are subjected to realistic hydraulic conditions simulated with computational fluid dynamics (CFD), and particle-structure interactions—representing fish collisions with turbine blades—are explicitly recorded and accounted for in the calculation of particle trajectories. We conducted transient CFD simulations by setting the runner in motion and allowing for better turbulence resolution, a modeling improvement over the conventional practice of simulating the system in steady state which was also done here. While both schemes yielded comparable bulk hydraulic performance, transient conditions exhibited a visual improvement in describing flow variability. We released streamtraces (steady flow solution) and DEM particles (transient solution) at the same location from where sensor fish (SF) have been released in field studies of the modeled turbine unit. The streamtrace-based results showed a better agreement with SF data than the DEM-based nadir pressures did because the former accounted for the turbulent dispersion at the intake but the latter did not. However, the DEM-based strike frequency is more representative of blade-strike probability than the steady solution is, mainly because DEM particles accounted for the full fish length, thus resolving (instead of modeling) the collision event.« less

Fish Passage in Large Culverts with Low Flows

DOT National Transportation Integrated Search

2014-08-01

A series of physical and numerical modeling runs were completed to support the development of a design procedure for characterizing the variation in velocity within non-embedded and embedded culverts. Physical modeling of symmetrical half-section cir...

Dealing With Uncertainty When Assessing Fish Passage Through Culvert Road Crossings

NASA Astrophysics Data System (ADS)

Anderson, Gregory B.; Freeman, Mary C.; Freeman, Byron J.; Straight, Carrie A.; Hagler, Megan M.; Peterson, James T.

2012-09-01

Assessing the passage of aquatic organisms through culvert road crossings has become increasingly common in efforts to restore stream habitat. Several federal and state agencies and local stakeholders have adopted assessment approaches based on literature-derived criteria for culvert impassability. However, criteria differ and are typically specific to larger-bodied fishes. In an analysis to prioritize culverts for remediation to benefit imperiled, small-bodied fishes in the Upper Coosa River system in the southeastern United States, we assessed the sensitivity of prioritization to the use of differing but plausible criteria for culvert impassability. Using measurements at 256 road crossings, we assessed culvert impassability using four alternative criteria sets represented in Bayesian belief networks. Two criteria sets scored culverts as either passable or impassable based on alternative thresholds of culvert characteristics (outlet elevation, baseflow water velocity). Two additional criteria sets incorporated uncertainty concerning ability of small-bodied fishes to pass through culverts and estimated a probability of culvert impassability. To prioritize culverts for remediation, we combined estimated culvert impassability with culvert position in the stream network relative to other barriers to compute prospective gain in connected stream habitat for the target fish species. Although four culverts ranked highly for remediation regardless of which criteria were used to assess impassability, other culverts differed widely in priority depending on criteria. Our results emphasize the value of explicitly incorporating uncertainty into criteria underlying remediation decisions. Comparing outcomes among alternative, plausible criteria may also help to identify research most needed to narrow management uncertainty.

Dealing with uncertainty when assessing fish passage through culvert road crossings.

PubMed

Anderson, Gregory B; Freeman, Mary C; Freeman, Byron J; Straight, Carrie A; Hagler, Megan M; Peterson, James T

2012-09-01

Assessing the passage of aquatic organisms through culvert road crossings has become increasingly common in efforts to restore stream habitat. Several federal and state agencies and local stakeholders have adopted assessment approaches based on literature-derived criteria for culvert impassability. However, criteria differ and are typically specific to larger-bodied fishes. In an analysis to prioritize culverts for remediation to benefit imperiled, small-bodied fishes in the Upper Coosa River system in the southeastern United States, we assessed the sensitivity of prioritization to the use of differing but plausible criteria for culvert impassability. Using measurements at 256 road crossings, we assessed culvert impassability using four alternative criteria sets represented in Bayesian belief networks. Two criteria sets scored culverts as either passable or impassable based on alternative thresholds of culvert characteristics (outlet elevation, baseflow water velocity). Two additional criteria sets incorporated uncertainty concerning ability of small-bodied fishes to pass through culverts and estimated a probability of culvert impassability. To prioritize culverts for remediation, we combined estimated culvert impassability with culvert position in the stream network relative to other barriers to compute prospective gain in connected stream habitat for the target fish species. Although four culverts ranked highly for remediation regardless of which criteria were used to assess impassability, other culverts differed widely in priority depending on criteria. Our results emphasize the value of explicitly incorporating uncertainty into criteria underlying remediation decisions. Comparing outcomes among alternative, plausible criteria may also help to identify research most needed to narrow management uncertainty.

Dealing with uncertainty when assessing fish passage through culvert road crossings

USGS Publications Warehouse

Anderson, Gregory B.; Freeman, Mary C.; Freeman, Byron J.; Straight, Carrie A.; Hagler, Megan M.; Peterson, James T.

2012-01-01

Assessing the passage of aquatic organisms through culvert road crossings has become increasingly common in efforts to restore stream habitat. Several federal and state agencies and local stakeholders have adopted assessment approaches based on literature-derived criteria for culvert impassability. However, criteria differ and are typically specific to larger-bodied fishes. In an analysis to prioritize culverts for remediation to benefit imperiled, small-bodied fishes in the Upper Coosa River system in the southeastern United States, we assessed the sensitivity of prioritization to the use of differing but plausible criteria for culvert impassability. Using measurements at 256 road crossings, we assessed culvert impassability using four alternative criteria sets represented in Bayesian belief networks. Two criteria sets scored culverts as either passable or impassable based on alternative thresholds of culvert characteristics (outlet elevation, baseflow water velocity). Two additional criteria sets incorporated uncertainty concerning ability of small-bodied fishes to pass through culverts and estimated a probability of culvert impassability. To prioritize culverts for remediation, we combined estimated culvert impassability with culvert position in the stream network relative to other barriers to compute prospective gain in connected stream habitat for the target fish species. Although four culverts ranked highly for remediation regardless of which criteria were used to assess impassability, other culverts differed widely in priority depending on criteria. Our results emphasize the value of explicitly incorporating uncertainty into criteria underlying remediation decisions. Comparing outcomes among alternative, plausible criteria may also help to identify research most needed to narrow management uncertainty.

Analysis of Environmental Issues Related to Small-Scale Hydroelectric Development IV: Fish Mortality Resulting From Turbine Passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Turbak, Susan C.; Reichle, Donna R.; Shriner, Carole R.

1981-01-01

The purpose of this report is to provide summary information for use by potential developers and regulators of small-scale hydroelectric projects (defined as existing dams that can be retrofitted to a total site capacity of ≤30 MW), where turbine-related mortality of fish is a potential issue affecting site-specific development. Mitigation techniques for turbine-related mortality are not covered in this report.

European Scientific Notes. Volume 37, Number 8.

DTIC Science & Technology

1983-08-31

generally accepted. Both uniaxial in their quiescent state but change to a and biaxial films were said to be deep color with light; the change in...defects and actually sold’ (e.g., fish ). In other ion beam mixing effects still must be words, when environmental "Conaoditis" determined separately...less turbidity, feasible. there would be more phytoplankton. In 2. The economic justificatio: addition, migratory fish passage would will depend on a

Land Management Agencies: Restoring Fish Passage Through Culverts on Forest Service and BLM Lands in Oregon and Washington Could Take Decades

DTIC Science & Technology

2001-11-01

provides the foundation for implementing stream and river enhancement projects, timber sales, and road building and decommissioning projects. According...monitoring of project results to ensure they are successful. For example, Oregon’s Rogue River Basin Fish Access Team, composed of local stakeholders...across the Rogue River basin. Potential techniques suggested to determine effectiveness include spawning and snorkeling (underwater observation

Field validation of experimental challenge models for IPN vaccines.

PubMed

Ramstad, A; Romstad, A B; Knappskog, D H; Midtlyng, P J

2007-12-01

Atlantic salmon S1/2 pre-smolts from the VESO Vikan hatchery were assigned to study groups, i.p. immunized with commercially available, multivalent oil-adjuvanted vaccines with (Norvax Compact 6 - NC-6) or without (Norvax Compact 4 - NC-4) recombinant infectious pancreatic necrosis virus (IPNV) antigen. A control group received saline solution. When ready for sea, the fish were transported to the VESO Vikan experimental laboratory, where two identical tanks were stocked with 75 fish per group before being transferred to 10 degrees C sea water and exposed by bath to first passage IPNV grown in CHSE-214 cells. The third tank containing 40 fish from each group was challenged by the introduction of 116 fish that had received an i.p injection of IPNV-challenge material. The remaining vaccinated fish were transported to the VESO Vikan marine field trial site and placed in two identical pens, each containing approximately 53 000 fish from the NC-6 group and 9000 fish from the NC-4 group. In the experimental bath challenge trial, the cumulative mortality was 75% and 78% in the control groups, and the relative percentage survival (RPS) of the NC-6-immunized fish vs. the reference vaccine groups was 60% and 82%, respectively. In the cohabitation challenge, the control mortality reached 74% and the IPNV-specific vaccine RPS was 72%. In both models, the reference vaccine lacking IPNV antigen gave a moderate but statistically significant non-specific protection. In the field, a natural outbreak of infectious pancreatic necrosis (IPN) occurred after 7 weeks lasting for approximately 3.5 months before problems due to winter ulcers became dominating. During this outbreak, mortality in the NC-4 groups were 33.5% and 31.6%, respectively, whereas mortality in the NC-6 groups were 6.9% and 5.3%, respectively, amounting to 81% IPNV-specific protection. In conclusion, the IPN protection estimates obtained by experimental challenges were consistent between tanks, and were confirmed by the field results.

Instream flow characterization of Upper Salmon River basin streams, central Idaho, 2005

USGS Publications Warehouse

Maret, Terry R.; Hortness, Jon E.; Ott, Douglas S.

2006-01-01

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream of the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the ESA-listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications resulting from irrigation practices, have directly affected quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include collection of habitat and streamflow information for the Physical Habitat Simulation System (PHABSIM) model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model simulation results can be used by resource managers to guide habitat restoration efforts by evaluating potential fish habitat and passage improvements by increasing or decreasing streamflow. In 2005, instream flow characterization studies were completed on Big Boulder, Challis, Bear, Mill, and Morgan Creeks. Continuous streamflow data were recorded upstream of all diversions on Big Boulder. Instantaneous measurements of discharge were also made at selected sites. In addition, natural summer streamflows were estimated for each study site using regional regression equations. This report describes PHABSIM modeling results for bull trout, Chinook salmon, and steelhead trout during summer streamflows. Habitat/discharge relations were summarized for adult and spawning life stages at each study site. In addition, streamflow needs for riffle dwelling invertebrate taxa (Ephemeroptera, Plecoptera, and Trichoptera) are presented. Adult fish passage and discharge relations were evaluated at specific transects that were identified as potential low-streamflow passage barriers at each study site. Continuous summer water temperature data for selected study sites were summarized and compared with Idaho Water Quality Standards and various water temperature requirements of targeted fish species. Results of these habitat studies can be used to prioritize and direct cost-effective actions to improve fish habitat for ESA-listed anadromous and native fish species in the basin. These actions may include acquiring water during critical low-flow periods by leasing or modifying irrigation delivery systems to minimize out-of-stream diversions.

Instream flow characterization of upper Salmon River Basin streams, Central Idaho, 2003

USGS Publications Warehouse

Maret, Terry R.; Hortness, Jon E.; Ott, Douglas S.

2004-01-01

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream from the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the federally listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications, as a result of irrigation practices, have directly affected the quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include the collection of habitat and streamflow information for the Physical Habitat Simulation (PHABSIM) model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model results can be used by resource managers to guide habitat restoration efforts in the evaluation of potential fish habitat and passage improvements by increasing streamflow. Instream flow characterization studies were completed on Pole, Fourth of July, Elk, and Valley Creeks during 2003. Continuous streamflow data were collected upstream from all diversions on each stream. In addition, natural summer streamflows were estimated for each study site using regression equations. PHABSIM results are presented for bull trout, chinook salmon, and steelhead trout over a range of summer streamflows. Habitat/discharge relations are summarized for juvenile, adult, and spawning life stages at each study site. Adult fish passage and discharge relations are evaluated at specific transects identified as a potential low-streamflow passage barrier at each study site. Continuous summer water temperature data for selected study sites also are summarized and compared with Idaho Water Quality Standards and various temperature requirements of targeted fish species. Results of these habitat studies can be used to prioritize and direct cost-effective actions to improve fish habitat for ESA-listed anadromous and native fish species in the basin. These actions may include acquiring water during critical low-flow periods by leasing or modifying irrigation delivery systems to minimize out-of-stream diversions.

36 CFR 7.46 - Virgin Islands Coral Reef National Monument.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Hurricane Hole and blue runner (hardnose) line fishing in the area south of St. John. The Superintendent... landfall of the hurricane to 48 hours following passage of the hurricane. (5) No lines or ropes shall be...

36 CFR 7.46 - Virgin Islands Coral Reef National Monument.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Hurricane Hole and blue runner (hardnose) line fishing in the area south of St. John. The Superintendent... landfall of the hurricane to 48 hours following passage of the hurricane. (5) No lines or ropes shall be...

36 CFR 7.46 - Virgin Islands Coral Reef National Monument.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Hurricane Hole and blue runner (hardnose) line fishing in the area south of St. John. The Superintendent... landfall of the hurricane to 48 hours following passage of the hurricane. (5) No lines or ropes shall be...

78 FR 16656 - Draft Damage Assessment and Restoration Plan and Environmental Assessment for Natural Resource...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-18

... may be sent to: Ian Zelo, NOAA Oil Spill Coordinator, Assessment and Restoration Division, 7600 Sand... are: (1) Improve Helmet Creek, restore juvenile and adult fish passage, (2) Improve water quality, and...

A comparison of single-suture and double-suture incision closures in seaward-migrating juvenile Chinook salmon implanted with acoustic transmitters: implications for research in river basins containing hydropower structures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Deters, Katherine A.; Cook, Katrina V.

Reductions in the size of acoustic transmitters implanted in migrating juvenile salmonids have resulted in the ability to make shorter incisions that may warrant using only a single suture for closure. However, it is not known if one suture will sufficiently hold the incision closed, particularly when outward pressure is placed on the surgical site such as when migrating fish experience pressure changes associated with passage at hydroelectric dams. The objective of this research was to evaluate the effectiveness of single-suture incision closures on juvenile Chinook salmon (Oncorhynchus tshawytscha). Juvenile Chinook salmon were surgically implanted with a 2012 Juvenile Salmonmore » Acoustic Telemetry System (JSATS) transmitter (0.30 g) and a passive integrated transponder tag (0.10 g) and incisions were closed with either one suture or two sutures. Mortality and tag retention were monitored and fish were examined after 7 and 14 days to evaluate tissue responses. In a separate experiment, surgically implanted fish were exposed to simulated turbine passage and then examined for expulsion of transmitters, expulsion of viscera through the incision, and mortal injury. With incisions closed using a single suture, there was no mortality or tag loss and similar or reduced tissue reaction compared to incisions closed with two sutures. Further, surgery time was significantly reduced when one suture was used, which leads to less handling and reduced stress. No tags were expelled during pressure scenarios and expulsion of viscera only occurred in two non-mortally injured fish (5%) with single sutures that were also exposed to very high pressure changes. No viscera expulsion was present in fish exposed to pressure scenarios likely representative of hydroturbine passage at many Columbia River dams (e.g. <2.7 ratio of pressure change; an acclimation pressure of 146.2 absolute kpa and a lowest exposure pressure of ~ 53.3 absolute kpa). Based on these results, we recommend the use of a single suture for surgical implantation of transmitters with incisions that are approximately 5 1/2 mm long after tag insertion.« less

McNary Dam, Ice Harbor Dam, and Lower Monumental Dam Smolt Monitoring Program; 1996 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hillson, Todd; Lind, Sharon; Price, William

1997-07-01

The Washington Department of Fish & Wildlife (WDFW) assumed responsibility for the Smolt Monitoring Program at McNary Dam on the Columbia River in 1990 and at the new juvenile collection facility at Lower Monumental Dam on the Snake River in 1993. In 1996, Smolt Monitoring Program activities also began at the new juvenile collection facility located at Ice Harbor Dam. This report summarizes the 1996 Smolt Monitoring work at all three sites. The work at Ice Harbor consisted of Gas Bubble Trauma (GBT) monitoring only. In general, the 1996 passage season at both the McNary and Lower Monumental sites canmore » be characterized by reduced passage of juveniles through the collection systems due to elevated river flows and spill, and low (<1%) overall facility mortality rates most likely resulting from cooler water temperatures. In accordance with the National Marine Fisheries Service recommendations (NMFS, 1995) all spring migrants were bypassed at McNary Dam in 1996. Mechanical problems within the McNary collection system resulted in collection and sampling activities being delayed until April 18 at this site, while sampling and collection began on the scheduled starting date of April 1 at Lower Monumental Dam. Monitoring operations were conducted through December 14 at McNary Dam and through October 28 at Lower Monumental Dam. An ongoing transportation evaluation summer migrant marking program was conducted at McNary Dam in 1996 by the NMFS. This necessitated the sampling of 394,211 additional fish beyond the recommended sampling guidelines. All total, 509,237 and 31,219 juvenile salmonids were anesthetized and individually counted, examined for scale loss, injuries, and brands by WDFW Smolt Monitoring personnel in 1996 at McNary Dam and Lower Monumental Dam, respectively.« less

An Analysis of Stream Culvert Fish Passage on the Navy Railroad Line between Bremerton and Shelton, Washington

DOE Office of Scientific and Technical Information (OSTI.GOV)

May, Christopher W.; Miller, Martin C.; Southard, John A.

2004-10-25

The Navy railroad service line runs between Shelton, Bremerton, and Silverdale, and is used by the Navy to transfer freight to its facilities. It is also used by commercial clients to ship service items and bulk cargo for municipalities along portions of the route. Culverts of various size and construction convey streams and stormwater runoff under the railroad line. These allow transfer of water and, in some cases allow for passage of juvenile and adult salmon into waters upstream of the culverts. As part of this project, 21 culverts along a 34-mile reach (Shelton to Bremerton) of this railroad weremore » surveyed to evaluate their function and ability to allow salmon to utilize the streams. The culverts and attached watersheds were evaluated using criteria developed by the Washington Department of Fish and Wildlife to assign a Priority Index (PI) to barriers present on each fish-bearing stream. The PI is a relative numeric rating indicator, assigned using consistent criteria related to the degree of potential habitat gained by removing barriers and improving the function of the watershed. Of the 21 culverts evaluated, five were found to be complete fish-passage barriers and six were found to be partial barriers, primarily to juvenile salmon. Three of these culverts had PI ratings above 10 and five others had ratings between 7 and 10. Corrective action can be taken based on any PI rating, but the WDFW normally assigns lower priority to projects with PI scores lower than 15. Several of the stream and culverts had previously been evaluated for structural integrity and function and have been scheduled for repair. A narrative indicating the condition of the culvert has been prepared as well as a table indicating the PI scores and a summary of recommendations for action for each culvert.« less

The Independent Technical Analysis Process Final Report 2006-2007.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duberstein, Corey; Ham, Kenneth; Dauble, Dennis

2007-03-01

The Bonneville Power Administration (BPA) contracted with the Pacific Northwest National Laboratory (PNNL) to provide technical analytical support for system-wide fish passage information (BPA Project No. 2006-010-00). The goal of this project was to produce rigorous technical analysis products using independent analysts and anonymous peer reviewers. This project provided an independent technical source for non-routine fish passage analyses while allowing routine support functions to be performed by other well-qualified entities. The Independent Technical Analysis Process (ITAP) was created to provide non-routine analysis for fish and wildlife agencies and tribes in particular and the public in general on matters related tomore » juvenile and adult salmon and steelhead passage through the mainstem hydrosystem. The process was designed to maintain the independence of analysts and reviewers from parties requesting analyses, to avoid potential bias in technical products. The objectives identified for this project were to administer a rigorous, transparent process to deliver unbiased technical assistance necessary to coordinate recommendations for storage reservoir and river operations that avoid potential conflicts between anadromous and resident fish. Seven work elements, designated by numbered categories in the Pisces project tracking system, were created to define and accomplish project goals as follows: (1) 118 Coordination - Coordinate technical analysis and review process: (a) Retain expertise for analyst/reviewer roles. (b) Draft research directives. (c) Send directive to the analyst. (d) Coordinate two independent reviews of the draft report. (e) Ensure reviewer comments are addressed within the final report. (2) 162 Analyze/Interpret Data - Implement the independent aspects of the project. (3) 122 Provide Technical Review - Implement the review process for the analysts. (4) 132 Produce Annual Report - FY06 annual progress report with Pisces Disseminate (5) 161 Disseminate Raw/Summary Data and Results - Post technical products on the ITAP web site. (6) 185-Produce Pisces Status Report - Provide periodic status reports to BPA. (7) 119 Manage and Administer Projects - project/contract administration.« less

Design Tools to Assess Hydro-Turbine Biological Performance: Priest Rapids Dam Turbine Replacement Project

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richmond, Marshall C.; Rakowski, Cynthia L.; Serkowski, John A.

2013-06-25

Over the past two decades, there have been many studies describing injury mechanisms associated with turbine passage, the response of various fish species to these mechanisms, and the probability of survival through dams. Although developing tools to design turbines that improve passage survival has been difficult and slow, a more robust quantification of the turbine environment has emerged through integrating physical model data, fish survival data, and computational fluid dynamics (CFD) studies. Grant County Public Utility District (GCPUD) operates the Priest Rapids Dam (PRD), a hydroelectric facility on the Columbia River in Washington State. The dam contains 10 Kaplan-type turbinemore » units that are now almost 50 years old. The Utility District plans to refit all of these aging turbines with new turbines. The Columbia River at PRD is a migratory pathway for several species of juvenile and adult salmonids, so passage of fish through the dam is a major consideration when replacing the turbines. In this presentation, a method for turbine biological performance assessment (BioPA) is introduced. Using this method, a suite of biological performance indicators is computed based on simulated data from a CFD model of a proposed turbine design. Each performance indicator is a measure of the probability of exposure to a certain dose of an injury mechanism. Using known relationships between the dose of an injury mechanism and frequency of injury (dose–response) from laboratory or field studies, the likelihood of fish injury for a turbine design can be computed from the performance indicator. By comparing the values of the indicators from proposed designs, the engineer can identify the more-promising alternatives. We will present application of the BioPA method for baseline risk assessment calculations for the existing Kaplan turbines at PRD that will be used as the minimum biological performance that a proposed new design must achieve.« less

Evaluation of a prototype surface flow bypass for juvenile salmon and steelhead at the powerhouse of Lower Granite Dam, Snake River, Washington, 1996-2000

USGS Publications Warehouse

Johnson, G.E.; Anglea, S.M.; Adams, N.S.; Wik, T.O.

2005-01-01

A surface flow bypass takes advantage of the natural surface orientation of most juvenile salmon Oncorhynchus spp. and steelhead O. mykiss by providing a route in the upper water column that downstream migrant fishes can use to pass a hydroelectric dam safely. A prototype structure, called the surface bypass and collector (SBC), was retrofitted on the powerhouse of Lower Granite Dam and was evaluated annually with biotelemetry and hydroacoustic techniques during the 5-year life span of the structure (1996-2000) to determine the entrance configuration that maximized passage efficiency and minimized forebay residence time. The best tested entrance configuration had maximum inflow (99 m 3/s) concentrated in a single surface entrance (5 m wide, 8.5 m deep). We identified five important considerations for future surface flow bypass development in the lower Snake River and elsewhere: (1) an extensive flow net should be formed in the forebay by use of relatively high surface flow bypass discharge (>7% of total project discharge); (2) a gradual increase in water velocity with increasing proximity to the surface flow bypass (ideally, acceleration 3 m/s) to entrain the subject juvenile fishes; (4) the shape and orientation of the surface entrance(s) should be adapted to fit site-specific features; and (5) construction of a forebay wall to increase fish availability to the surface flow bypass should be considered. The efficiency of the SBC was not high enough (maximum of 62% relative to passage at turbine units 4-5) for the SBC to operate as a stand-alone bypass. Anywhere that surface-oriented anadromous fish must negotiate hydroelectric dams, surface flow bypass systems can provide cost-effective use of typically limited water supplies to increase the nonturbine passage, and presumably survival, of downstream migrants. ??Copyright by the American Fisheries Society 2005.

Field-based evaluations of horizontal flat-plate fish screens, II: Testing of a unique off-stream channel device - The Farmers Screen

USGS Publications Warehouse

Mesa, Matthew G.; Rose, Brien P.; Copeland, Elizabeth S.

2012-01-01

Screens are installed at water diversion sites to reduce entrainment of fish. Recently, the Farmers Irrigation District (Oregon) developed a unique flat-plate screen (the “Farmers Screen”) that operates passively and may offer reduced installation and operating costs. To evaluate the effectiveness of this screen on fish, we conducted two separate field experiments. First, juvenile coho salmon Oncorhynchus kisutch were released over a working version of this screen under a range of inflows (0.02–0.42 m3/s) and diversion flows (0.02–0.34 m3/s) at different water depths. Mean approach velocities ranged from 0 to 5 cm/s and sweeping velocities ranged from 36 to 178 cm/s. Water depths over the screen surface ranged from 1 to 25 cm and were directly related to inflow. Passage of fish over the screen under these conditions did not severely injure them or cause delayed mortality, and no fish were observed becoming impinged on the screen surface. Second, juvenile coho salmon and steelhead O. mykiss were released at the upstream end of a 34-m flume and allowed to volitionally move downstream and pass over a 3.5-m section of the Farmers Screen to determine whether fish would refuse to pass over the screen after encountering its leading edge. For coho salmon, 75–95% of the fish passed over the screen within 5 min and 82–98% passed within 20 min, depending on hydraulic conditions. For steelhead, 47–90% of the fish passed over the screen within 5 min and 79–95% passed within 20 min. Our results indicate that when operated within its design criteria, the Farmers Screen provides safe and efficient downstream passage of juvenile salmonids under a variety of hydraulic conditions.

A cabled acoustic telemetry system for detecting and tracking juvenile salmon: Part 1. Engineering design and instrumentation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weiland, Mark A.; Deng, Zhiqun; Seim, Thomas A.

2011-05-26

The U.S. Army Corps of Engineers-Portland District started development of the Juvenile Salmon Acoustic Telemetry System (JSATS), a nonproprietary technology, in 2001 to meet the needs for monitoring the survival of juvenile salmonids through the 31 federal dams in the Federal Columbia River Power System (FCRPS). Initial development focused on coded acoustic microtransmitters, and autonomous receivers that could be deployed in open reaches of the river for detection of the juvenile salmonids implanted with microtransmitters as they passed the autonomous receiver arrays. In 2006 the Pacific Northwest National Laboratory (PNNL) was tasked with development of an acoustic receiver system formore » deployment at hydropower facilities (cabled receiver) for detecting fish tagged with microtransmitters as well as tracking them in 2 or 3-dimensions as the fish passed at the facility for determining route of passage. The additional route of passage information, combined with survival estimates, is used by the dam operators and managers to make structural and operational changes at the hydropower facilities to improve survival of fish as they pass the facilities and through the FCRPS.« less

Strategies for impediment rehabilitation to create fish passage opportunities in the Rappahannock River basin.

DOT National Transportation Integrated Search

2004-01-01

Areas where anthropogenic development coincides with aquatic systems often impede the flow of organisms and nutrients in either an upstream, downstream, or bidirectional path. These impediments are especially outstanding in the tidal and nontidal fre...

Developing short-span alternatives to reinforced concrete box culvert structures in Kansas.

DOT National Transportation Integrated Search

2014-07-01

Concrete box culvert floor slabs are known to have detrimental effects on river and stream hydraulics. : Consequences include an aquatic environment less friendly to the passage of fish and other organisms. This has : prompted environmental regulatio...

A Prototype Expert System for Fishway Design.

ERIC Educational Resources Information Center

Bender, Michael J.; And Others

1992-01-01

Describes the development of a prototype expert system to recommend the most suitable type of fishway for given design conditions. Recommendations are provided on the basis of fishway hydraulics, fish passage performance, and cost requirements. An appendix provides an example consultation. (MDH)

Brown meagre vocalization rate increases during repetitive boat noise exposures: a possible case of vocal compensation.

PubMed

Picciulin, Marta; Sebastianutto, Linda; Codarin, Antonio; Calcagno, Giuliana; Ferrero, Enrico A

2012-11-01

This study investigated whether or not boat noise causes variations in brown meagre (Sciaena umbra) vocalizations recorded in a nearshore Mediterranean marine reserve. Six nocturnal experimental sessions were carried out from June to September 2009. In each of them, a recreational boat passed over vocalizing fish 6 times with 1 boat passage every 10 min. For this purpose three different boats were used in random order: an 8.5-m cabin-cruiser (CC), a 5-m fiberglass boat (FB), and a 7-m inflatable boat (INF). In situ continuous acoustic recordings were collected using a self-standing sonobuoy. Because boat noise levels largely exceeded both background noise and S. umbra vocalizations in the species' hearing frequency range, masking of acoustic communication was assumed. Although no immediate effect was observed during a single boat passage, the S. umbra mean pulse rate increased over multiple boat passages in the experimental condition but not in the control condition, excluding that the observed effect was due to a natural rise in fish vocalizations. The observed vocal enhancement may result either from an increased density of callers or from an increased number of pulses/sounds produced by already acoustically active individuals, as a form of vocal compensation. These two explanations are discussed.

Monitoring of Juvenile Subyearling Chinook Salmon Survival and Passage at John Day Dam, Summer 2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weiland, Mark A.; Ploskey, Gene R.; Hughes, James S.

The purpose of this study was to evaluate dam passage survival of subyearling Chinook salmon (Oncorhynchus tshawytscha; CH0) at John Day Dam (JDA) during summer 2010. This study was conducted by researchers from the Pacific Northwest National Laboratory (PNNL) in collaboration with the Pacific States Marine Fisheries Commission (PSMFC) and the University of Washington (UW). The study was designed to estimate the effects of 30% and 40% spill treatment levels on single release survival rates of CH0 passing through two reaches: (1) the dam, and 40 km of tailwater, (2) the forebay, dam, and 40 km of tailwater. The studymore » also estimated additional passage performance measures which are stipulated in the Columbia Basin Fish Accords.« less

An injectable acoustic transmitter for juvenile salmon

DOE PAGES

Deng, Zhiqun; Carlson, Thomas J.; Li, Huidong; ...

2015-01-29

Salmon recovery, and the potential detrimental effects of dams on fish, has been attracting national attention in due to great environmental and economic implications. Acoustic Telemetry has been the primary method for studying salmon passage. However, the size of the existing transmitters limits the minimum size of fish that can be studied, introducing bias to the study results. We developed the first acoustic fish transmitter that can be implanted by injection instead of surgery. The new injectable transmitter offers improved performance and 30% weight reduction. Because the new transmitter costs significantly less to use, substantially reduces adverse effects of implantation,more » and provides additional biological benefits for tagged fish, it will become the enabling technology for studying migration behavior and survival of species and sizes of fish that have never been studied before. This will lead to critical information for salmon recovery and the development of fish-friendly hydroelectric systems.« less

An injectable acoustic transmitter for juvenile salmon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Carlson, Thomas J.; Li, Huidong

Salmon recovery, and the potential detrimental effects of dams on fish, has been attracting national attention in due to great environmental and economic implications. Acoustic Telemetry has been the primary method for studying salmon passage. However, the size of the existing transmitters limits the minimum size of fish that can be studied, introducing bias to the study results. We developed the first acoustic fish transmitter that can be implanted by injection instead of surgery. The new injectable transmitter offers improved performance and 30% weight reduction. Because the new transmitter costs significantly less to use, substantially reduces adverse effects of implantation,more » and provides additional biological benefits for tagged fish, it will become the enabling technology for studying migration behavior and survival of species and sizes of fish that have never been studied before. This will lead to critical information for salmon recovery and the development of fish-friendly hydroelectric systems.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Magie, Robert J.; Morris, Matthew S.; Ledgerwood, Richard D.

In 2008, we sampled migrating juvenile Pacific salmonids Oncorhynchus spp. tagged with passive integrated transponder (PIT) tags using a surface pair trawl in the upper Columbia River estuary (rkm 61-83). The cod-end of the trawl was replaced with a cylindrical PIT-tag detection antenna with an 86-cm-diameter fish-passage opening and two detection coils connected in series. The pair trawl was 105 m long with a 91.5-m opening between the wings and a sample depth of 4.9 m. Also during 2008, we finalized the development of a prototype 'matrix' antenna, which was larger than previous antennas by a considerable magnitude. The matrixmore » antenna consisted of 6 coils: a 3-coil front component and a 3-coil rear component, which were separated by 1.5-m of net mesh. The fish-passage opening was 2.5 m wide by 3.0 m tall and was attached to a standard-size pair trawl net. Intermittent sampling with a single crew began on 7 March and targeted yearling Chinook salmon O. tshawytscha and steelhead O. mykiss. Daily sampling using two crews began on 30 April and continued through 14 June; during this period we detected 2.7% of all juvenile salmonids previously detected at Bonneville Dam--a measure of sample efficiency. Sampling with a single crew continued through 20 August and targeted subyearling Chinook salmon. We detected 7,397 yearling Chinook salmon, 2,735 subyearling Chinook salmon, 291 coho salmon O. kisutch, 5,950 steelhead, and 122 sockeye salmon O. nerka in the upper estuary. We deployed the matrix antenna system and the older, cylindrical antenna system (86-cm-diameter fish-passage opening) simultaneously in mid-May 2008 to test matrix detection efficiency. The cylindrical antenna system had been used successfully in 2007 and early 2008. Because distribution of migrating salmonids in the estuary changes rapidly, we felt that a tandem sampling effort between the two systems was the only way to truly evaluate comparative detection efficiency. We deployed both systems within 1 km of each other during a period of high fish densities on 13, 14, and 15 May. Detections of the matrix system surpassed those of the cylindrical system by 53% in 14 h of simultaneous sampling (total detections 716 and 339, respectively). We believe that the higher detection rate observed with the matrix system was due to fewer smolts escaping the trawl entrance and to more smolts readily passing through the larger fish-passage opening. After tandem sampling, we continued exclusive use of the matrix system for the remainder of the 2008 juvenile migration season. Mean survival rates from Lower Granite to Bonneville Dam for yearling Chinook salmon and steelhead were 42% (SE = 3.7%) and 46% (SE = 1.5%), respectively. Over 358,000 PIT-tagged salmonids were transported, and we detected 4,619 of these fish.« less

DOWNSTREAM MIGRATION OF SALMONID SMOLTS IN OREGON RIVERS AND ESTUARIES

EPA Science Inventory

Migratory fish passage is an important designated use for many Oregon estuaries. Acoustic transmitters were implanted in coho smolts in 2004 and 2006 to evaluate how estuarine habitat, and habitat loss, might affect population health. Acoustic receivers that identified individu...

Developing short-span alternatives to reinforced concrete box culvert structures in Kansas : [technical summary].

DOT National Transportation Integrated Search

2014-07-01

Concrete box culvert floor slabs are known to have detrimental effects on river and stream hydraulics. Consequences include an aquatic environment less friendly to the passage of fish and other organisms. This has prompted environmental regulations r...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, John R.; Townsend, Richard L.; Seaburg, Adam

The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

Research on the upstream passage of juvenile salmon through culverts : retrofit baffles

DOT National Transportation Integrated Search

2006-04-01

This report provides data from biological tests conducted November 2005 through January 2006 by Battelle for the Washington State Department of Transportation (WSDOT) at the Culvert Test Bed Facility located at the Washington Department of Fish and W...

First-passage problems: A probabilistic dynamic analysis for degraded structures

NASA Technical Reports Server (NTRS)

Shiao, Michael C.; Chamis, Christos C.

1990-01-01

Structures subjected to random excitations with uncertain system parameters degraded by surrounding environments (a random time history) are studied. Methods are developed to determine the statistics of dynamic responses, such as the time-varying mean, the standard deviation, the autocorrelation functions, and the joint probability density function of any response and its derivative. Moreover, the first-passage problems with deterministic and stationary/evolutionary random barriers are evaluated. The time-varying (joint) mean crossing rate and the probability density function of the first-passage time for various random barriers are derived.

Balancing Energy, Food Security, and Critical Ecosystems: Dam Siting, Design and Operations in the Mekong River Basin

NASA Astrophysics Data System (ADS)

Wild, T. B.; Reed, P. M.; Loucks, D.

2016-12-01

The Mekong River basin in Southeast Asia is one of several river basins with exceptionally high biodiversity value where intensive hydropower dam development is anticipated. In the Mekong basin, over 100 dams are planned to be constructed in the next 20-30 years. As planned, these dams will alter the river's natural water, sediment and nutrient flows, and will fragment fish migration pathways. In doing so, they will degrade one of the world's most productive freshwater fish habitats, upon which some 60 million people depend for food and income security. For those dams that have not yet been constructed, there still exist opportunities to modify their siting, design and operation (SDO) to achieve a more balanced set of tradeoffs among hydropower production, sediment/nutrient passage and adult fish/larvae passage. We present a successful case study wherein we explored such alternative SDO opportunities in partnership with the Government of Cambodia for Sambor Dam, planned to be built on the main stem of the Mekong. Sambor would be one of the world's longest dams, spanning 18 km across the river just upstream of (1) Tonle Sap Lake, which supplies 70% of Cambodians' protein, and (2) the Mekong Delta in Vietnam, responsible for 50% of Vietnam's rice production. We will describe key dam siting and design modifications required to mitigate ecological impacts. We will then focus on the most promising alternative dam siting/design concept, exploring the reservoir operations space to demonstrate that a complex set of tradeoffs exist among a diverse set of energy and ecosystem objectives. Results indicate that even for a hydrologically small reservoir, a wide array of potential reservoir operating policies exist that have vastly different food-energy implications. While some policies would significantly mitigate ecological impacts, many policies exist that would pose a severe threat to the sustainability of the fishery. Failure to sample the reservoir operations space at appropriate resolution could result in failure to accurately identify tradeoffs and vulnerabilities. We explore energy-ecosystem tradeoffs while demonstrating to stakeholders the impacts of transitioning from their initial deterministic analysis that largely focused on energy revenue to broader many-objective stochastic problem formulations.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weiland, Mark A.; Ploskey, Gene R.; Hughes, James S.

The overall purpose of the acoustic telemetry study at JDA during 2009 was to determine the best configuration and operation for JDA prior to conducting BiOp performance standard tests. The primary objective was to determine the best operation between 30% and 40% spill treatments. Route-specific and JDA to TDA forebay survival estimates, passage distribution, and timing/behavior metrics were used for comparison of 30% to a 40% spill treatments. A secondary objective was to evaluate the performance of TSWs installed in spill bays 15 and 16 and to estimate fish survival rates and passage efficiencies under 30% and 40% spill-discharge treatmentsmore » each season.« less

Instream flow characterization of upper Salmon River basin streams, central Idaho, 2004

USGS Publications Warehouse

Maret, Terry R.; Hortness, Jon E.; Ott, Douglas S.

2005-01-01

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream of the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the ESA-listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications resulting from irrigation practices, have directly affected quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include collection of habitat and streamflow information for the Physical Habitat Simulation System model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model results can be used by resource managers to guide habitat restoration efforts by evaluating potential fish habitat and passage improvements by increasing streamflow. In 2004, instream flow characterization studies were completed on Salmon River and Beaver, Pole, Champion, Iron, Thompson, and Squaw Creeks. Continuous streamflow data were recorded upstream of all diversions on Salmon River and Pole, Iron, Thompson, and Squaw Creeks. In addition, natural summer streamflows were estimated for each study site using regional regression equations. This report describes Physical Habitat Simulation System modeling results for bull trout, Chinook salmon, and steelhead trout during summer streamflows. Habitat/discharge relations were summarized for adult and spawning life stages at each study site. Adult fish passage and discharge relations were evaluated at specific transects identified as a potential low-streamflow passage barrier at each study site. Continuous summer water temperature data for selected study sites were summarized and compared with Idaho Water Quality Standards and various water temperature requirements of targeted fish species. Continuous summer water temperature data recorded in 2003 and streamflow relations were evaluated for Fourth of July Creek using the Stream Segment Temperature model that simulates mean and maximum daily water temperatures with changes in streamflow. Results of these habitat studies can be used to prioritize and direct cost-effective actions to improve fish habitat for ESA-listed anadromous and native fish species in the basin. These actions may include acquiring water during critical low-flow periods by leasing or modifying irrigation delivery systems to minimize out-of-stream diversions.

2004 AND 2006 COHO SMOLT MOVEMENT IN THE YAQUINA RIVER AND ESTUARY

EPA Science Inventory

Migratory fish passage is an important designated use for many Oregon estuaries. Acoustic transmitters were implanted in coho smolts in 2004 and 2006 to evaluate how estuarine habitat, and habitat loss, might affect population health. Acoustic receivers that identified individu...

Environmental Issues Related to Conventional Hydropower

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Colotelo, Alison HA; Brown, Richard S.

Hydropower is the largest renewable electrical energy source in the world and has a total global capacity of approximately 1,010 GW from 150 countries. Although hydropower has many environmental advantages, hydropower dams have potential adverse ecological impacts such as fish passage, water quality, and habitat alterations.

75 FR 26226 - Executive Order 13508 Chesapeake Bay Protection and Restoration Section 203 Final Coordinated...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-11

... quality, stream restoration, agriculture conservation, wetland restoration, forest buffers, fish passage... Bay Protection and Restoration Section 203 Final Coordinated Implementation Strategy AGENCY... availability of a final strategy for restoration and protection of the Chesapeake Bay that was prepared...

Fish passage at road crossings: an annotated bibliography.

Treesearch

Lynette Anderson; Mason Bryant

1980-01-01

A report of special interest to fishery biologists, resource managers, hydrologists, and road engineers, this bibliography lists publications pertinent to road crossings of salmon and trout streams. Topics include bridge and culvert installation, design criteria, mechanics, hydraulics, and economics, as well as their biological effects.

Survival estimates of migrant juvenile Salmonids through Bonneville Dam using radio telemetry, 2004

USGS Publications Warehouse

Counihan, Timothy D.; Hardiman, Jill; Walker, Chris; Puls, Amy; Holmberg , Glen

2006-01-01

During 2004, the USGS evaluated the survival of radio-tagged yearling and subyearling Chinook salmon and steelhead trout through the ice and trash sluiceway and the minimum gap runner (MGR) turbine unit at Bonneville Dam’s powerhouse 1. Survival was estimated using paired release-recapture models with paired releases made directly into these passage routes and in the tailrace of Bonneville Dam. For the evaluations of survival through the MGR two separate control release locations were used; one location was directly downstream of the front roll below the turbine unit and the other release location was further downstream of the powerhouse 2 juvenile bypass outfall. During spring and summer releases of radio-tagged fish into the MGR and the ice and trash sluiceway, powerhouse 1 was not continuously operated due to a policy that prioritized the passage of water through powerhouse 2. Because of this policy, powerhouse 1 was only operated sporadically for short time intervals before and after the releases of radiotagged fish associated with this study.

Combining participatory and socioeconomic approaches to map fishing effort in small-scale fisheries.

PubMed

Thiault, Lauric; Collin, Antoine; Chlous, Frédérique; Gelcich, Stefan; Claudet, Joachim

2017-01-01

Mapping the spatial allocation of fishing effort while including key stakeholders in the decision making process is essential for effective fisheries management but is difficult to implement in complex small-scale fisheries that are diffuse, informal and multifaceted. Here we present a standardized but flexible approach that combines participatory mapping approaches (fishers' spatial preference for fishing grounds, or fishing suitability) with socioeconomic approaches (spatial extrapolation of social surrogates, or fishing capacity) to generate a comprehensive map of predicted fishing effort. Using a real world case study, in Moorea, French Polynesia, we showed that high predicted fishing effort is not simply located in front of, or close to, main fishing villages with high dependence on marine resources; it also occurs where resource dependency is moderate and generally in near-shore areas and reef passages. The integrated approach we developed can contribute to addressing the recurrent lack of fishing effort spatial data through key stakeholders' (i.e., resource users) participation. It can be tailored to a wide range of social, ecological and data availability contexts, and should help improve place-based management of natural resources.

Combining participatory and socioeconomic approaches to map fishing effort in small-scale fisheries

PubMed Central

Collin, Antoine; Chlous, Frédérique; Gelcich, Stefan; Claudet, Joachim

2017-01-01

Mapping the spatial allocation of fishing effort while including key stakeholders in the decision making process is essential for effective fisheries management but is difficult to implement in complex small-scale fisheries that are diffuse, informal and multifaceted. Here we present a standardized but flexible approach that combines participatory mapping approaches (fishers’ spatial preference for fishing grounds, or fishing suitability) with socioeconomic approaches (spatial extrapolation of social surrogates, or fishing capacity) to generate a comprehensive map of predicted fishing effort. Using a real world case study, in Moorea, French Polynesia, we showed that high predicted fishing effort is not simply located in front of, or close to, main fishing villages with high dependence on marine resources; it also occurs where resource dependency is moderate and generally in near-shore areas and reef passages. The integrated approach we developed can contribute to addressing the recurrent lack of fishing effort spatial data through key stakeholders' (i.e., resource users) participation. It can be tailored to a wide range of social, ecological and data availability contexts, and should help improve place-based management of natural resources. PMID:28486509

Temporary Restoration of Bull Trout Passage at Albeni Falls Dam

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paluch, Mark; Scholz, Allan; McLellan, Holly

2009-07-13

This study was designed to monitor movements of bull trout that were provided passage above Albeni Falls Dam, Pend Oreille River. Electrofishing and angling were used to collect bull trout below the dam. Tissue samples were collected from each bull trout and sent to the U. S. Fish and Wildlife Service Abernathy Fish Technology Center Conservation Genetics Lab, Washington. The DNA extracted from tissue samples were compared to a catalog of bull trout population DNA from the Priest River drainage, Lake Pend Oreille tributaries, and the Clark Fork drainage to determine the most probable tributary of origin. A combined acousticmore » radio or radio tag was implanted in each fish prior to being transported and released above the dam. Bull trout relocated above the dam were able to volitionally migrate into their natal tributary, drop back downstream, or migrate upstream to the next dam. A combination of stationary radio receiving stations and tracking via aircraft, boat, and vehicle were used to monitor the movement of tagged fish to determine if the spawning tributary it selected matched the tributary assigned from the genetic analysis. Seven bull trout were captured during electrofishing surveys in 2008. Of these seven, four were tagged and relocated above the dam. Two were tagged and left below the dam as part of a study monitoring movements below the dam. One was immature and too small at the time of capture to implant a tracking tag. All four fish released above the dam passed by stationary receivers stations leading into Lake Pend Oreille and no fish dropped back below the dam. One of the radio tags was recovered in the tributary corresponding with the results of the genetic test. Another fish was located in the vicinity of its assigned tributary, which was impassable due to low water discharge at its mouth. Two fish have not been located since entering the lake. Of these fish, one was immature and not expected to enter its natal tributary in the fall of 2008. The other fish was large enough to be mature, but at the time of capture its sex was unable to be determined, indicating it may not have been mature at the time of capture. These fish are expected to enter their natal tributaries in early summer or fall of 2009.« less

In vitro culture of the flagellate protozoan Hexamita salmonis

USGS Publications Warehouse

Uzmann, J.R.; Hayduk, S.H.

1963-01-01

Trophozoites of Hexamita salmonis, asserted pathogen of juvenile salmonid fishes, were isolated from two species of Pacific salmon hosts and cultured repeatedly in an organic medium saturated with nitrogen. Primary isolates and serial subcultures usually exhibited five- to tenfold population increases per passage.

76 FR 13601 - Submission for OMB Review; Comment Request

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-14

... opportunities for fish passage improvements or dam removal that may fit into existing funding programs directed... uses of dams, anticipated uses of dams, important issues or concerns to dam owners, and owners... dams will also be identified. Affected Public: Business or other for-profit organizations. Frequency...

An injectable acoustic transmitter for juvenile salmon

NASA Astrophysics Data System (ADS)

Deng, Z. D.; Carlson, T. J.; Li, H.; Xiao, J.; Myjak, M. J.; Lu, J.; Martinez, J. J.; Woodley, C. M.; Weiland, M. A.; Eppard, M. B.

2015-01-01

Salmon recovery and the potential detrimental effects of dams on fish have been attracting national attention due to the environmental and economic implications. In recent years acoustic telemetry has been the primary method for studying salmon passage. However, the size of the existing transmitters limits the minimum size of fish that can be studied, introducing a bias to the study results. We developed the first acoustic fish transmitter that can be implanted by injection instead of surgery. The new injectable transmitter lasts four times longer and weighs 30% less than other transmitters. Because the new transmitter costs significantly less to use and may substantially reduce adverse effects of implantation and tag burden, it will allow for study of migration behavior and survival of species and sizes of fish that have never been studied before. The new technology will lead to critical information needed for salmon recovery and the development of fish-friendly hydroelectric systems.

An injectable acoustic transmitter for juvenile salmon

PubMed Central

Deng, Z. D.; Carlson, T. J.; Li, H.; Xiao, J.; Myjak, M. J.; Lu, J.; Martinez, J. J.; Woodley, C. M.; Weiland, M. A.; Eppard, M. B.

2015-01-01

Salmon recovery and the potential detrimental effects of dams on fish have been attracting national attention due to the environmental and economic implications. In recent years acoustic telemetry has been the primary method for studying salmon passage. However, the size of the existing transmitters limits the minimum size of fish that can be studied, introducing a bias to the study results. We developed the first acoustic fish transmitter that can be implanted by injection instead of surgery. The new injectable transmitter lasts four times longer and weighs 30% less than other transmitters. Because the new transmitter costs significantly less to use and may substantially reduce adverse effects of implantation and tag burden, it will allow for study of migration behavior and survival of species and sizes of fish that have never been studied before. The new technology will lead to critical information needed for salmon recovery and the development of fish-friendly hydroelectric systems. PMID:25630763

DOE Office of Scientific and Technical Information (OSTI.GOV)

McKinstry, Craig A.; Carlson, Thomas J.; Brown, Richard S.

In 2005 the U.S. Army Corps of Engineers (USACE) began a study to investigate the response of hatchery and run-of-the-river (ROR) juvenile Chinook salmon to the effects of rapid decompression during passage through mainstem Federal Columbia River Power System (FCRPS) Kaplan turbines. In laboratory studies conducted by Pacific Northwest National Laboratory (PNNL) for USACE since 2005, juvenile fish have been exposed to rapid decompression in a barometric pressure chamber. An initial study considered the response of juvenile Chinook salmon bearing radio transmitters to rapid decompression resulting from exposure to a pressure time history simulating the worst case condition that mightmore » be experienced during passage through an operating turbine. The study in 2005 found that acclimation depth was a very important treatment factor that greatly influenced the significantly higher incidence of injury and mortality of rapidly decompressed Chinook salmon bearing radio telemetry devices. In 2006 we initiated a statistical investigation using data in hand into derivation of a new end-point measure for assessment of the physiological response of juvenile Chinook salmon to rapid decompression. Our goal was a measure that would more fully utilize both mortality and injury data while providing a better assessment of the most likely survival outcome for juvenile physostomous fish exposed to rapid decompression. The conclusion of the analysis process was to classify fish as mortally injured when any of the 8 injuries are present, regardless of whether the fish was last observed alive or not. The mortally injured classification has replaced mortality as the end point metric for our rapid decompression studies. The process described in this report is an example of how a data set may be analyzed to identify decision criterion for objective classification of test fish to a specific end-point. The resulting list of 8 mortal injuries is applicable to assess injuries from rapid decompression and is currently being applied to ongoing studies. We intend to update this analysis as more data becomes available and to extend it to ROR Chinook salmon smolt. The method itself is applicable to other injury and mortality data for juvenile salmonids from laboratory and field studies related to all dam passage routes and for collision, strike, and shear injuries in addition to decompression.« less

Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlson, Thomas J.; Skalski, John R.

2010-10-01

The purpose of this compliance study was to estimate dam passage survival of yearling Chinook salmon and steelhead smolts at The Dalles Dam during spring 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay boat-restricted zone (BRZ) to the tailrace BRZ at The Dalles Dam, as well as the forebay residence time, tailrace egress, and spill passage efficiency (SPE), as required in themore » Columbia Basin Fish Accords. A virtual/paired-release design was used to estimate dam passage survival at The Dalles Dam. The approach included releases of acoustic-tagged smolts above John Day Dam that contributed to the formation of a virtual release at the face of The Dalles Dam. A survival estimate from this release was adjusted by a paired release below The Dalles Dam. A total of 4,298 yearling Chinook salmon and 4,309 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation. The dam passage survival results are summarized as follows: Yearling Chinook Salmon 0.9641 (SE = 0.0096) and Steelhead 0.9535 (SE = 0.0097).« less

Establishment and characterization of a new marine fish cell line from ovary of barfin flounder ( Verasper moseri)

NASA Astrophysics Data System (ADS)

Xu, Xiaohui; Fan, Tingjun; Jiang, Guojian; Yang, Xiuxia

2015-12-01

A novel continuous ovary cell line from barfin flounder ( Verasper moseri) (BFO cell line) was established with its primitive application in transgenic expression demonstrated in this study. Primarily cultured cells grew well at 22°C in Dulbecco's modified Eagle medium/F12 medium (DMEM/F12, 1:1; pH 7.2) supplemented with 20% fetal bovine serum (FBS), carboxymethyl chitooligosaccharide, basic fibroblast growth factor (bFGF) and insulin-like growth factor-I (IGF-I). The primary BFO cells in fibroblastic morphology proliferated into a confluent monolayer about 2 weeks later, and were able to be subcultured. Impacts of medium and temperature on the growth of the cells were examined. The optimum growth was found in DMEM/F12 with 20% FBS and at 22°C. The BFO cells can be continuously subcultured to Passage 120 steadily with a population doubling time of 32.7 h at Passage 60. Chromosome analysis revealed that 72% of BFO cells at Passage 60 maintained the normal diploid chromosome number (46) with a normal karyotype of 2st+44t. The results of gene transformation indicated that green fluorescence protein (GFP) positively expressed in these cells after being transformed with pcDNA3.1-GFP. Therefore, a continuous and transformable BFO cell line was successfully established, which may serve as a useful tool for cytotechnological manipulation and transgenic modification of this fish.

Walla Walla River Basin Fish Screen Evaluations; Nursery Bridge Fishway and Garden City/Lowden II Sites, 2005-2006 Progress Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chamness, Mickie

2006-06-01

Pacific Northwest National Laboratory (PNNL) evaluated two fish screen facilities in the Walla Walla River basin in 2005 and early 2006. The Garden City/Lowden screen site was evaluated in April and June 2005 to determine whether the fish screens met National Marine Fisheries Service criteria to provide safe passage for juvenile salmonids. Louvers behind the screens at the Nursery Bridge Fishway were modified in fall 2005 in an attempt to minimize high approach velocities. PNNL evaluated the effects of those modifications in March 2006. Results of the Garden City/Lowden evaluations indicate the site performs well at varying river levels andmore » canal flows. Approach velocities did not exceed 0.4 feet per second (fps) at any time. Sweep velocities increased toward the fish ladder in March but not in June. The air-burst mechanism appears to keep large debris off the screens, although it does not prevent algae and periphyton from growing on the screen face, especially near the bottom of the screens. At Nursery Bridge, results indicate all the approach velocities were below 0.4 fps under the moderate river levels and operational conditions encountered on March 7, 2006. Sweep did not consistently increase toward the fish ladder, but the site generally met the criteria for safe passage of juvenile salmonids. Modifications to the louvers seem to allow more control over the amount of water moving through the screens. We will measure approach velocities when river levels are higher to determine whether the louver modifications can help correct excessive approach velocities under a range of river levels and auxiliary water supply flows.« less

A retrospective on hydroacoustic assessment of fish passage in Alaskan rivers

NASA Astrophysics Data System (ADS)

Burwen, Debby; Fleischman, Steve; Maxwell, Suzanne; Pfisterer, Carl

2005-04-01

The Alaska Department of Fish and Game (ADFG) has enumerated fish stocks in rivers for over 30 years using a variety of acoustic technologies including single-, dual-, and split-beam sonar. Most recently, ADFG has evaluated a relatively new sonar technology at several sites in Alaska to determine its applicability to counting migrating fish in rivers. The new system, called a Dual frequency IDentification SONar (DIDSON), is a high-definition imaging sonar designed and manufactured by the University of Washington's Applied Physics Lab for military applications such as diver detection and underwater mine identification. Results from experiments conducted in 2002-2004 indicate that DIDSON provides significant improvements in our ability to detect, track, and determine the direction of travel of migrating fish in rivers. One of the most powerful uses of the DIDSON has been to combine its camera-like images of fish swimming behavior with corresponding split-beam data. These linked datasets have allowed us to evaluate the effects of fish orientation and swimming behavior on echo shape parameters that have proven useful in the classification of certain fish species.

Quantifying Barotrauma Risk to Juvenile Fish during Hydro-turbine Passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richmond, Marshall C.; Serkowski, John A.; Ebner, Laurie L.

2014-03-15

We introduce a method for hydro turbine biological performance assessment (BioPA) to bridge the gap between field and laboratory studies on fish injury and turbine engineering design. Using this method, a suite of biological performance indicators is computed based on simulated data from a computational fluid dynamics (CFD) model of a proposed hydro turbine design. Each performance indicator is a measure of the probability of exposure to a certain dose of an injury mechanism. If the relationship between the dose of an injury mechanism (stressor) and frequency of injury (dose-response) is known from laboratory or field studies, the likelihood ofmore » fish injury for a turbine design can be computed from the performance indicator. By comparing the values of the indicators from various turbine designs, engineers and biologists can identify the more-promising designs and operating conditions to minimize hydraulic conditions hazardous to passing fish. In this paper, the BioPA method is applied to estimate barotrauma induced mortal injury rates for Chinook salmon exposed to rapid pressure changes in Kaplan-type hydro turbines. Following the description of the general method, application of the BioPA to estimate the probability of mortal injury from exposure to rapid decompression is illustrated using a Kaplan hydro turbine at the John Day Dam on the Columbia River in the Pacific Northwest region of the USA. The estimated rates of mortal injury increased from 0.3% to 1.7% as discharge through the turbine increased from 334 to 564 m3/s for fish assumed to be acclimated to a depth of 5 m. The majority of pressure nadirs occurred immediately below the runner blades, with the lowest values in the gap at the blade tips and just below the leading edge of the blades. Such information can help engineers focus on problem areas when designing new turbine runners to be more fish-friendly than existing units.« less

How Physical Processes are Informing River Management Actions at Marble Bluff Dam, Truckee River, Nevada

NASA Astrophysics Data System (ADS)

Bountry, J.; Godaire, J.; Bradley, D. N.

2017-12-01

At the terminus of the Truckee River into Pyramid Lake (Nevada, USA), upstream river management actions have dramatically reshaped the river landscape, posing significant challenges for the management of endangered aquatic species and maintenance of existing infrastructure. Within the last 100 years, upstream water withdrawal for human uses has resulted in a rapid lowering of Pyramid Lake which initiated up to 90 ft of channel incision. In 1976 Marble Bluff Dam was constructed to halt the upstream progression of channel incision and protect upstream agricultural lands, tribal resources, and infrastructure. Since construction an additional 40 ft of lake lowering and subsequent channel lowering now poses a potential risk to the structural integrity of the dam. The dynamic downstream river combined with ongoing reservoir sedimentation pose challenges to fish passage facilities that enable migration of numerous endangered cui-ui and threatened Lahontan Cutthroat Trout (LCT) to upstream spawning areas each year. These facilities include a fish lock at the dam, a fish bypass channel which allows fish to avoid the shallow delta area during low lake levels, and a meandering channel constructed by the Nature Conservancy to connect the bypass channel to the receding Pyramid Lake. The reservoir formed by Marble Bluff Dam has completely filled with sediment which impacts fish passage facilities. The original operating manual for the dam recommends year-round flushing of sediment through radial gates, but this can no longer be accomplished. During critical fish migration periods in the spring operators must ensure fish entrance channels downstream of the dam are not buried with released sediment and fish are not trapped in a portion of the reservoir full of sediment that would risk sending them back over the dam. To help inform future reservoir sediment and infrastructure management strategies, we bracket a range of potential river responses to lake level lowering and floods using historical trends, current field data, and hydraulic and sediment transport models. We present options for adaptive management for dam and reservoir sediment operations that incorporates monitoring of river processes to inform annual implementation strategies along with long-term planning.

Downstream fish passage guide walls: A hydraulic scale model analysis

USGS Publications Warehouse

Mulligan, Kevin; Towler, Brett; Haro, Alexander J.; Ahlfeld, David P.

2018-01-01

Partial-depth guide walls are used to improve passage efficiency and reduce the delay of out-migrating anadromous fish species by guiding fish to a bypass route (i.e. weir, pipe, sluice gate) that circumvents the turbine intakes, where survival is usually lower. Evaluation and monitoring studies, however, indicate a high propensity for some fish to pass underneath, rather than along, the guide walls, compromising their effectiveness. In the present study we evaluated a range of guide wall structures to identify where/if the flow field shifts from sweeping (i.e. flow direction primarily along the wall and towards the bypass) to downward-dominant. Many migratory fish species, particularly juveniles, are known to drift with the flow and/or exhibit rheotactic behaviour during their migration. When these behaviours are present, fish follow the path of the flow field. Hence, maintaining a strong sweeping velocity in relation to the downward velocity along a guide wall is essential to successful fish guidance. Nine experiments were conducted to measure the three-dimensional velocity components upstream of a scale model guide wall set at a wide range of depths and angles to flow. Results demonstrated how each guide wall configuration affected the three-dimensional velocity components, and hence the downward and sweeping velocity, along the full length of the guide wall. In general, the velocities produced in the scale model were sweeping dominant near the water surface and either downward dominant or close to the transitional depth near the bottom of the guide wall. The primary exception to this shift from sweeping do downward flow was for the minimum guide wall angle tested in this study (15°). At 15° the flow pattern was fully sweeping dominant for every cross-section, indicating that a guide wall with a relatively small angle may be more likely to produce conditions favorable to efficient guidance. A critical next step is to evaluate the behaviour of migratory fish as they approach and swim along a guide wall in a controlled laboratory environment.

Successful propagation of shrimp yellow head virus in immortal mosquito cells.

PubMed

Gangnonngiw, Warachin; Kanthong, Nipaporn; Flegel, Timothy W

2010-05-18

Research on crustacean viruses is hampered by the lack of continuous cell lines susceptible to them. To overcome this problem, we previously challenged immortal mosquito and lepidopteran cell lines with shrimp yellow head virus (YHV), followed by serial, split-passage of whole cells, and showed that this produced cells that persistently expressed YHV antigens. To determine whether such insect cultures positive for YHV antigens could be used to infect shrimp Penaeus monodon with YHV, culture supernatants and whole-cell homogenates were used to challenge shrimp by injection. Shrimp injected with culture supernatants could not be infected. However, shrimp injection-challenged with whole-cell homogenates from Passage 5 (early-passage) of such cultures died with histological and clinical signs typical for yellow head disease (YHD), while homogenates of mock-passaged, YHV-challenged cells did not. By contrast, shrimp challenged with cell homogenates of late-passage cultures became infected with YHV, but survived, suggesting that YHV attenuation had occurred during its long-term serial passage in insect cells. Thus, YHV could be propagated successfully in C6/36 mosquito cells and used at low passage numbers as a source of inoculum to initiate lethal infections in shrimp. This partially solves the problem of lack of continuous shrimp cell lines for cultivation of YHV.

Long-term bed degradation in Maryland streams (phase 3, part I) : urban streams in the Piedmont Plateau province, [research summary].

DOT National Transportation Integrated Search

2014-09-01

Estimation of potential long-term down-cutting of the stream bed is necessary for evaluation and design of bridges for scour and culverts for fish passage. Existing guidelines for assessing this potential long-term bed degradation (LTBD) in Maryland ...

40 CFR 797.1400 - Fish acute toxicity test.

Code of Federal Regulations, 2011 CFR

2011-07-01

... construction materials, test chambers, and testing apparatus to dilution water or to test solutions prior to... or the leaching of substances from the test facilities into the dilution water or test solution. (5... intermittent passage of test solution or dilution water through a test chamber, or a holding or acclimation...

78 FR 2685 - Central Utah Project Completion Act; East Hobble Creek Restoration Project Draft Environmental...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-01-14

... to fish passage, and enhancement of the existing water supply. Public Disclosure Before including... for Water and Science, Interior. ACTION: Notice of availability. SUMMARY: The draft environmental... Environmental Assessment are available for inspection at: Central Utah Water Conservancy District, 355 West...

Long-term bed degradation in Maryland streams (phase 2) : Blue Ridge and Western Piedmont provinces.

DOT National Transportation Integrated Search

2012-03-01

Estimation of potential long-term down-cutting of the stream bed is necessary for evaluation and design of bridges for scour and culverts for fish passage. The purpose of this study has been to improve predictions of this potential long-term bed degr...

Effects of multiple acute stressors on the predator avoidance ability and physiology of juvenile Chinook salmon

USGS Publications Warehouse

Mesa, Matthew G.

1994-01-01

Northern squaw fish Ptychocheilus oregonensis are the predominant predators of juvenile Pacific salmonids Oncorhynchus spp. in the Columbia River, and their predation rates are greatest just below dams. Because juvenile salmonids are commonly subjected to multiple stressors at dams in the course of their seaward migration, high predation rates below dams may be due in part to an increase in the vulnerability of stressed fish. I conducted laboratory experiments to examine the predator avoidance ability and physiological stress responses of juvenile chinook salmon O. tshawytscha subjected to treatments (stressors) designed to simulate routine hatchery practices (multiple handlings) or dam passage (multiple agitations). Both stressors resulted in lethargic behavior in the fish, and agitation also caused disorieniation and occasional injury. When equal numbers of stressed and unstressed fish were exposed to northern squawfish for up to 1 h, significantly more stressed fish were eaten, but this effect was not evident during longer exposures. The lack of differential predation in trials lasting up to 24 h can be explained by the rapid development of schooling behavior in the prey, but other possibilities exist, such as changing ratios of stressed and unstressed prey over time. Concentrations of plasma cortisol, glucose, and lactate in fish subjected to multiple stressors were similar and sometimes cumulative, returned to prestress levels within 6-24 h, and correlated poorly with predator avoidance ability. My results suggest that juvenile salmonids are capable of avoiding predators within 1 h after being subjected to multiple acute stressors even though physiological homeostasis may be altered for up to 24 h. Therefore, because juvenile salmonids typically reside in lailrace areas for only a short time after dam passage, measures aimed at reducing physical stress or protecting them as they migrate through dam tailraces may help alleviate the relatively intense predation in these areas.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abernethy, C. Scott; Neitzel, Duane A.; Lusty, E. William

The Bonneville Power Administration (BPA), the United States Bureau of Reclamation (USSR), and the Washington State Department of Ecology (WDOE) are funding the construction and evaluation of fish passage facilities and fish protection facilities at irrigation and hydroelectric diversions in the Yakima River Basin, Washington State. The program provides offsite enhancement to compensate for fish and wildlife losses caused by hydroelectric development throughout the Columbia River Basin, and addresses natural propagation of salmon to help mitigate the impact of irrigation in the Yakima River Basin. This report evaluates the flow characteristics of the screening facilities. Studies consisted of velocity measurementsmore » taken in front of the rotary drum screens and within the fish bypass systems during peak flows. Measurements of approach velocity and sweep velocity were emphasized in these studies; however, vertical velocity was also measured. 5 refs., 18 figs., 15 tabs.« less

First identification of eggs of the Asian fish tapeworm Bothriocephalus acheilognathi (Cestoda: Bothriocephalidea) in human stool.

PubMed

Yera, Hélène; Kuchta, Roman; Brabec, Jan; Peyron, François; Dupouy-Camet, Jean

2013-06-01

We report the first case of egg isolation of the Asian fish tapeworm Bothriocephalus acheilognathi (Bothriocephalidea) from human stool. A male patient from Saint Laurent du Maroni (French Guiana) presenting abdominal pain was examined in France for the diagnosis of intestinal parasites. Diphyllobothrium-like eggs were observed in his stool. However, molecular phylogenetic analyses based on sequences of rDNA and COI genes showed that the eggs observed belong to a bothriocephalidean cestode B. acheilognathi. The adult life stages of B. acheilognathi cestodes are known as invasive parasites of a wide spectrum of fish; however, they have not been described to parasitize any mammals. This human infection seems to be accidental and represents a parasite passage through human intestine after the consumption of an infected fish host. Copyright © 2013. Published by Elsevier Ireland Ltd.

A Cabled Acoustic Telemetry System for Detecting and Tracking Juvenile Salmon: Part 2. Three-Dimensional Tracking and Passage Outcomes

PubMed Central

Deng, Z. Daniel; Weiland, Mark A.; Fu, Tao; Seim, Tom A.; LaMarche, Brian L.; Choi, Eric Y.; Carlson, Thomas J.; Eppard, M. Brad

2011-01-01

In Part 1 of this paper, we presented the engineering design and instrumentation of the Juvenile Salmon Acoustic Telemetry System (JSATS) cabled system, a nonproprietary sensing technology developed by the U.S. Army Corps of Engineers, Portland District (Oregon, USA) to meet the needs for monitoring the survival of juvenile salmonids through the hydroelectric facilities within the Federal Columbia River Power System. Here in Part 2, we describe how the JSATS cabled system was employed as a reference sensor network for detecting and tracking juvenile salmon. Time-of-arrival data for valid detections on four hydrophones were used to solve for the three-dimensional (3D) position of fish surgically implanted with JSATS acoustic transmitters. Validation tests demonstrated high accuracy of 3D tracking up to 100 m upstream from the John Day Dam spillway. The along-dam component, used for assigning the route of fish passage, had the highest accuracy; the median errors ranged from 0.02 to 0.22 m, and root mean square errors ranged from 0.07 to 0.56 m at distances up to 100 m. For the 2008 case study at John Day Dam, the range for 3D tracking was more than 100 m upstream of the dam face where hydrophones were deployed, and detection and tracking probabilities of fish tagged with JSATS acoustic transmitters were higher than 98%. JSATS cabled systems have been successfully deployed on several major dams to acquire information for salmon protection and for development of more “fish-friendly” hydroelectric facilities. PMID:22163919

A Cabled Acoustic Telemetry System for Detecting and Tracking Juvenile Salmon: Part 2. Three-Dimensional Tracking and Passage Outcomes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Weiland, Mark A.; Fu, Tao

2011-05-26

In Part 1 of this paper [1], we presented the engineering design and instrumentation of the Juvenile Salmon Acoustic Telemetry System (JSATS) cabled system, a nonproprietary technology developed by the U.S. Army Corps of Engineers, Portland District, to meet the needs for monitoring the survival of juvenile salmonids through the 31 dams in the Federal Columbia River Power System. Here in Part 2, we describe how the JSATS cabled system was employed as a reference sensor network for detecting and tracking juvenile salmon. Time-of-arrival data for valid detections on four hydrophones were used to solve for the three-dimensional (3D) positionmore » of fish surgically implanted with JSATS acoustic transmitters. Validation tests demonstrated high accuracy of 3D tracking up to 100 m from the John Day Dam spillway. The along-dam component, used for assigning the route of fish passage, had the highest accuracy; the median errors ranged from 0.06 to 0.22 m, and root mean square errors ranged from 0.05 to 0.56 m at distances up to 100 m. For the case study at John Day Dam during 2008, the range for 3D tracking was more than 100 m upstream of the dam face where hydrophones were deployed, and detection and tracking probabilities of fish tagged with JSATS acoustic transmitters were higher than 98%. JSATS cabled systems have been successfully deployed on several major dams to acquire information for salmon protection and for development of more “fish-friendly” hydroelectric facilities.« less

Rock Island Dam Smolt Monitoring; 1994-1995 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Truscott, Keith B.; Fielder, Paul C.

1995-10-01

Downstream migrating salmon and steelhead trout (Oncorhynchus spp.) smolts were monitored at the Rock Island Dam bypass trap from April 1 - August 31, 1954. This was the tenth consecutive year that the bypass trap was monitored. Data collected included: (1) number of fish caught by species, (2) number of adipose clipped and/or Passive Integrated Transponder (PIT) tagged fish caught by species, (3) daily average riverflow, (4) daily average powerhouse No. 1 and No. 2 flows and daily average spill. These data were transmitted to the Fish Passage Center, which manages the Smolt Monitoring Program throughout the Columbia River Basin.more » The Smolt Monitoring Program is used to manage the {open_quotes}water budget{close_quotes}, releasing upstream reservoir water storage allocated to supplement river flows to enhance survival of downstream migrating juvenile salmonids. The Rock Island Dam trapping facility collected 37,795 downstream migrating salmonids in 1994. Collected fish included 4 yearling and 4 sub-yearling chinook salmon (O. tshawytscha) that had been previously PIT tagged to help determine migration rates. Additionally, 1,132 sub-yearling chinook, 4,185 yearling chinook, 6,627 steelhead, (O. mykiss) and 422 sockeye (O. nerka) with clipped adipose fins were collected. The middle 80% of the 1994 spring migration (excluding sub-yearling chinooks) passed Rock Island Dam during a 34 day period, April 25 - May 28. Passage rates of chinook and steelhead smolts released from hatcheries and the downstream migration timing of all salmonids are presented. The spring migration timing of juvenile salmonids is strongly influenced by hatchery releases above Rock Island Dam.« less

Fish pass assessment by remote control: a novel framework for quantifying the hydraulics at fish pass entrances

NASA Astrophysics Data System (ADS)

Kriechbaumer, Thomas; Blackburn, Kim; Gill, Andrew; Breckon, Toby; Everard, Nick; Wright, Ros; Rivas Casado, Monica

2014-05-01

Fragmentation of aquatic habitats can lead to the extinction of migratory fish species with severe negative consequences at the ecosystem level and thus opposes the target of good ecological status of rivers defined in the EU Water Framework Directive (WFD). In the UK, the implementation of the EU WFD requires investments in fish pass facilities of estimated 532 million GBP (i.e. 639 million Euros) until 2027 to ensure fish passage at around 3,000 barriers considered critical. Hundreds of passes have been installed in the past. However, monitoring studies of fish passes around the world indicate that on average less than half of the fish attempting to pass such facilities are actually successful. There is a need for frameworks that allow the rapid identification of facilities that are biologically effective and those that require enhancement. Although there are many environmental characteristics that can affect fish passage success, past research suggests that variations in hydrodynamic conditions, reflected in water velocities, velocity gradients and turbulences, are the major cues that fish use to seek migration pathways in rivers. This paper presents the first steps taken in the development of a framework for the rapid field-based quantification of the hydraulic conditions downstream of fish passes and the assessment of the attractivity of fish passes for salmonids and coarse fish in UK rivers. For this purpose, a small-sized remote control platform carrying an acoustic Doppler current profiler (ADCP), a GPS unit, a stereo camera and an inertial measurement unit has been developed. The large amount of data on water velocities and depths measured by the ADCP within relatively short time is used to quantify the spatial and temporal distribution of water velocities. By matching these hydraulic features with known preferences of migratory fish, it is attempted to identify likely migration routes and aggregation areas at barriers as well as hydraulic features that may distract fish away from fish pass entrances. The initial steps of the framework development have focused on the challenge of precise spatial data referencing in areas with limited sky view to navigation satellites. Platform tracking with a motorised Total Station, various satellite-based positioning solutions and simultaneous localisation and mapping (SLAM) based on stereo images have been tested. The effect of errors in spatial data referencing on ADCP-derived maps of flow features and bathymetry will be quantified through simultaneous deployment of these navigation technologies and the ADCP. This will inform the selection of a cost-effective platform positioning system in practice. Further steps will cover the quantification of uncertainties in ADCP data caused by highly turbulent flows and the identification of suitable ADCP data sampling strategies at fish passes. The final framework for fish pass assessment can contribute to an improved understanding of the interaction of fish and the complex hydraulic river environment.

Behavior of White Sturgeon near hydroprojects and fishways

USGS Publications Warehouse

Parsley, M.J.; Wright, C.D.; Van Der Leeuw, B. K.; Kofoot, E.E.; Perry, C.A.; Moser, M.L.

2006-01-01

During March 2004 through November 2005, white sturgeon movements were monitored at The Dalles Dam to characterize their distribution and movements in the immediate vicinity of the dam and to determine timing and routes of passage. A combination of radio and acoustic telemetry technologies were used to detect tagged fish within fishways and at strategic locations along the dam, the shorelines, and in the forebay. White sturgeon > 95 cm total length (TL) that were captured on baited setlines fished in the forebay and in the tailrace cul-de-sac received a surgically implanted transmitter that emitted radio and acoustic signals. During the course of this study, a total of 148 fish were tagged; 58 were captured and released in the forebay and 90 in the tailrace.

Long-term bed degradation in Maryland streams (phase 3, part I) : urban streams in the Piedmont Plateau province.

DOT National Transportation Integrated Search

2014-05-01

Estimation of potential long-term down-cutting of the stream bed is necessary for evaluation and design of bridges for scour and culverts for fish passage. The purpose of this study has been to improve predictions of this potential long-term bed degr...

MONITORING CULVERT PASSAGE OF JUVENILE SALMONIDS WITH PIT TAGS AND STATIONARY AND PORTABLE PIT-TAG READERS

EPA Science Inventory

Federal land management agencies in the PNW face increasing pressure to replace culverts that do not pass all life history stages of anadromous salmon and trout. Prioritization of culverts for replacement is often based on the physical parameters of culverts, and not on how fish...

75 FR 73059 - Record of Decision and Floodplain Statement of Findings for the Cushman Hydroelectric Project...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-29

... license to include inter alia conditions for fish passage facilities and authorization to construct the... originally opposed Tacoma's Cultural Resource Summary Report, and cultural resource protection became a... in the MOA. The MOA includes a Treatment Plan that Tacoma must follow to protect cultural resources...

Potential roles of fish, birds, and water in swamp privet (Forestiera acuminata) seed dispersal

Treesearch

Susan B. Adams; Paul B. Hamel; Kristina Connor; Bryce Burke; Emile S. Gardiner; David Wise

2007-01-01

Forestiera acuminata (swamp privet) is a common wetland shrub/small tree native to the southeastern United States. We examined several possible dispersal avenues for the plant. We tested germination of seeds exposed to various treatments, including passage through Ictalurus punctatus (Channel Catfi sh) guts, and conducted other...

Genetic assessment of ornamental fish species from North East India.

PubMed

Dhar, Bishal; Ghosh, Sankar Kumar

2015-01-25

Ornamental fishes are traded with multiple names from various parts around the world, including North East India. Most are collected from the wild, due to lack of species-specific culture or breeding, and therefore, such unmanaged collection of the wild and endemic species could lead to severe threats to biodiversity. Despite many regulatory policies, trade of threatened species, including the IUCN listed species have been largely uncontrolled, due to species identification problems arising from the utilization of multiple trade names. So, the development of species-specific DNA marker is indispensable where DNA Barcoding is proved to be helpful in species identification. Here, we investigated, through DNA Barcoding and morphological assessment, the identification of 128 ornamental fish specimens exported from NE India from different exporters. The generated sequences were subjected to similarity match in BOLD-IDS as well as BLASTN, and analysed using MEGA5.2 for species identification through Neighbour-Joining (NJ) clustering, and K2P distance based approach. The analysis revealed straightforward identification of 84 specimens into 35 species, while 44 specimens were difficult to distinguish based on CO1 barcode alone. However, these cases were resolved through morphology, NJ and distanced based method and found to be belonging to 16 species. Among the 51 identified species, 14 species represented multiple trade names; 17 species belonged to threatened category. Species-level identification through DNA Barcoding along with traditional morphotaxonomy reflects its efficacy in regulating ornamental fish trade and therefore, appeals for their conservation in nature. The use of trade names rather than the zoological name created the passage for trafficking of the threatened species and demands immediate attention for sustaining wildlife conservation. Copyright © 2014 Elsevier B.V. All rights reserved.

Invasive zebra mussels (Driessena polymorpha) and Asian clams (Corbicula fluminea) survive gut passage of migratory fish species: implications for dispersal

USGS Publications Warehouse

Gatlin, Michael R.; Shoup, Daniel E.; Long, James M.

2013-01-01

The introduction and spread of invasive species is of great concern to natural resource managers in the United States. To effectively control the spread of these species, managers must be aware of the multitude of dispersal methods used by the organisms. We investigated the potential for survival through the gut of a migrating fish (blue catfish, Ictalurus furcatus) as a dispersal mechanism for two invasive bivalves: zebra mussel (Driessena polymorpha) and Asian clam (Corbicula fluminea). Blue catfish (N = 62) were sampled over several months from Sooner Lake, Oklahoma, transported to a laboratory and held in individual tanks for 48 h. All fecal material was collected and inspected for live mussels. Survival was significantly related to water temperature in the lake at the time of collection, with no mussels surviving above 21.1 C°, whereas 12 % of zebra mussels (N = 939) and 39 % of Asian clams (N = 408) consumed in cooler water survived gut passage. This research demonstrates the potential for blue catfish to serve as a dispersal vector for invasive bivalves at low water temperatures.

Passage performance of long-distance upstream migrants at a large dam on the Paraná River and the compounding effects of entry and ascent

USGS Publications Warehouse

Wagner, Ricardo Luiz; Makrakis, Sergio; Castro-Santos, Theodore R.; Makrakis, Maristela Cavicchioli; Dias, João Henrique Pinheiro; Belmont, René Fuster

2012-01-01

This paper presents results of a fishway evaluation performed at the Engenheiro Sérgio Motta Hydroelectric Power Plant (known as Porto Primavera) - CESP, Paraná River, Brazil. The evaluation was designed to quantify entry and passage proportions of 4 long-distance migratory fish species: Brycon orbignyanus (piracanjuba), Piaractus mesopotamicus (pacu), Prochilodus lineatus (curimba), and Rhinelepis aspera (cascudo-preto). Proportions finding and entering the fishway differed between species, ranged from 7.4 % (Prochilodus lineatus) to 55.4% (Piaractus mesopotamicus). Also, proportion passing was different between species, ranged from 31% (R. aspera) to 100% (Prochilodus lineatus). Fish that were marked and released within the fishway had greater failure rates than those that entered volitionally. Total time to pass ranged from 1.48 hours (Prochilodus lineatus) to 178.9 hours (R. aspera). Failure rates were greatest in the lower end of the fishway. Although some individuals of all species passed successfully, significant challenges remain to restoring connectivity of the upper Paraná River.

Sensitivity of the downward to sweeping velocity ratio to the bypass flow percentage along a guide wall for downstream fish passage

USGS Publications Warehouse

Mulligan, Kevin; Towler, Brett; Haro, Alexander J.; Ahlfeld, David P.

2017-01-01

Partial-depth impermeable guidance structures (or guide walls) are used as a method to assist in the downstream passage of fish at a hydroelectric facility. However, guide walls can result in a strong downward velocity causing the approaching fish to pass below the wall and into the direction of the turbine intakes. The objective of this study was to describe how the ratio of the vertical velocity to the sweeping velocity magnitude changes along the full length and depth of a guide wall under a wide range of bypass flow percentages within a power canal. This paper focused on two guide wall configurations, each set at an angle of 45 ° to the approaching flow field and at a depth of 10 and 20 ft (3.05 and 6.10 m). The hydraulic conditions upstream of each guide wall configuration were shown to be impacted by a change in the bypass flow percentage, not only near the bypass but also at upstream sections of the guide wall. Furthermore, the effect of changing the bypass flow percentage was similar for both guide wall depths. In both cases, the effect of increasing the bypass flow percentage was magnified closer to the bypass and deeper in the water column along the guide wall.

Numerical analysis of the performance of rock weirs: Effects of structure configuration on local hydraulics

USGS Publications Warehouse

Holmquist-Johnson, C. L.

2009-01-01

River spanning rock structures are being constructed for water delivery as well as to enable fish passage at barriers and provide or improve the aquatic habitat for endangered fish species. Current design methods are based upon anecdotal information applicable to a narrow range of channel conditions. The complex flow patterns and performance of rock weirs is not well understood. Without accurate understanding of their hydraulics, designers cannot address the failure mechanisms of these structures. Flow characteristics such as jets, near bed velocities, recirculation, eddies, and plunging flow govern scour pool development. These detailed flow patterns can be replicated using a 3D numerical model. Numerical studies inexpensively simulate a large number of cases resulting in an increased range of applicability in order to develop design tools and predictive capability for analysis and design. The analysis and results of the numerical modeling, laboratory modeling, and field data provide a process-based method for understanding how structure geometry affects flow characteristics, scour development, fish passage, water delivery, and overall structure stability. Results of the numerical modeling allow designers to utilize results of the analysis to determine the appropriate geometry for generating desirable flow parameters. The end product of this research will develop tools and guidelines for more robust structure design or retrofits based upon predictable engineering and hydraulic performance criteria. ?? 2009 ASCE.

Upstream Passage, Spawning, and Stock Identification of Fall Chinook in the Snake River, 1992 and 1993 : Final Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Blankenship, H. Lee; Mendel, Glen W.

This final report of the 3-year study summarizes activities and results for 1993. Study objectives were to: (1) determine the source of losses (or accounting errors) for adult chinook salmon between Ice Harbor Dam (IHR) and Lower Granite Dam (LGR), and upstream of LGR in the Snake River; (2) identify spawning locations upstream of LGR for calibration of aerial redd surveys, redd habitat mapping, carcass recovery for genetic stock profile analysis, and correction of estimated adult/redd ratios; and (3) estimate passage and migration times at Snake River. 200 fall chinook salmon were radio tagged and tracked with aerial, fixed-site, andmore » ground mobile tracking. Fish were released upstream of IHR at Charbonneau Park (CHAR). 190 of the fish were tracked or relocated away from CHAR. 59 fish descended to below IHR without crossing Lower Monumental Dam (LMO). Another 128 salmon passed upstream of LMO without falling back at IHR. Only 80 salmon passed Little Goose Dam (LGO) without falling back at a downstream dam; 66 of these fish passed LGR. Many fish that fell back reascended the dams. A total of 72 salmon released at CHAR passed upstream of LGR, including fish that had fallen back and reascended a dam. Over 80 percent of the salmon that entered Lyons Ferry Hatchery each year had reached LGO before descending to the hatchery. Extensive wandering was documented between LMO and upstream of LGR before salmon entered Lyons Ferry Hatchery or the Tucannon River. In 1993, 41 salmon were found to be of hatchery origin when recovered. These fish entered Lyons Ferry Hatchery with similar movements to unmarked salmon. Each year a few salmon have remained near the hatchery without entering, which suggests the hatchery may have inadequate attraction flows. Fall chinook passed lower Snake River dams in 2-5 days each on average. Median travel times through LMO and LGO were 1.0-1.3 days each, which was slower than for spring chinook or steelhead in 1993. 5 refs., 21 figs., 20 tabs.« less

Sluiceway Operations to Pass Juvenile Salmonids at The Dalles Dam, Columbia River, USA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Khan, Fenton; Skalski, J. R.

Existing ice and trash sluiceways are commonly used to pass juvenile salmonids downstream at hydropower dams through a benign, non-turbine route. At The Dalles Dam on the Columbia River, managers undertook optimizing operations of sluiceway weirs to maximize survival of juvenile salmonids at the powerhouse. We applied fixed-location hydroacoustic methods to compare fish passage rates and sluiceway efficiencies for two weir configurations during 2004 and 2005: three weirs versus six weirs, located at the mid- versus east powerhouse, respectively. We also analyzed horizontal distributions of passage at the sluiceway and turbines and the effects of operating turbines beneath open sluicewaymore » gates to provide supporting data relevant to operations optimization. Based on the findings, we recommend the following for long-term operations for the sluiceway at The Dalles Dam: open six rather than three sluiceway weirs to take advantage of the maximum hydraulic capacity of the sluiceway; open the three weirs above the western-most operating main turbine unit (MU) and the three weirs at MU 8 where turbine passage rates are relatively high; operate the turbine units below open sluiceway weirs as a standard procedure; operate the sluiceway 24 h/d year-round to maximize its benefits to juvenile salmonids; and use the same operations for spring and summer emigrants. These operational concepts are transferable to dams where sluiceway surface flow outlets are used protect downstream migrating fishes.« less

Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Colotelo, Alison HA; Harnish, Ryan A.; Jones, Bryan W.

Steelhead (Oncorhynchus mykiss) populations have declined throughout their range in the last century and many populations, including those of the Snake River Basin are listed under the Endangered Species Act of 1973. The reasons for their decline are many and complex, but include habitat loss and degradation, overharvesting, and dam construction. The 2008 Biological Opinion calls for an increase in the abundance of female steelhead through an increase in iteroparity (i.e., repeat spawning) and this can be realized through a combination of reconditioning and in-river survival of migrating kelts. The goal of this study is to provide the data necessarymore » to inform fisheries managers and dam operators of Snake River kelt migration patterns, survival, and routes of dam passage. Steelhead kelts (n = 487) were captured and implanted with acoustic transmitters and passive integrated transponder (PIT)-tags at the Lower Granite Dam (LGR) Juvenile Fish Facility and at weirs located in tributaries of the Snake and Clearwater rivers upstream of LGR. Kelts were monitored as they moved downstream through the Federal Columbia River Power System (FCRPS) by 15 autonomous and 3 cabled acoustic receiver arrays. Cabled receiver arrays deployed on the dam faces allowed for three-dimensional tracking of fish as they approached the dam face and were used to determine the route of dam passage. Overall, 27.3% of the kelts tagged in this study successfully migrated to Martin Bluff (rkm 126, as measured from the mouth of the Columbia River), which is located downstream of all FCRPS dams. Within individual river reaches, survival per kilometer estimates ranged from 0.958 to 0.999; the lowest estimates were observed in the immediate forebay of FCRPS dams. Steelhead kelts tagged in this study passed over the spillway routes (spillway weirs, traditional spill bays) in greater proportions and survived at higher rates compared to the few fish passed through powerhouse routes (turbines and juvenile bypass systems). The results of this study provide information about the route of passage and subsequent survival of steelhead kelts that migrated through the Snake and Columbia rivers from LGR to Bonneville Dam in 2013. These data may be used by fisheries managers and dam operators to identify potential ways to increase the survival of kelts during their seaward migrations.« less

Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Colotelo, Alison H.A.; Harnish, Ryan A.; Jones, Bryan W.

2014-12-15

Steelhead (Oncorhynchus mykiss) populations have declined throughout their range in the last century and many populations, including those of the Snake River Basin are listed under the Endangered Species Act of 1973. The reasons for their decline are many and complex, but include habitat loss and degradation, overharvesting, and dam construction. The 2008 Biological Opinion calls for an increase in the abundance of female steelhead through an increase in iteroparity (i.e., repeat spawning) and this can be realized through a combination of reconditioning and in-river survival of migrating kelts. The goal of this study is to provide the data necessarymore » to inform fisheries managers and dam operators of Snake River kelt migration patterns, survival, and routes of dam passage. Steelhead kelts (n = 487) were captured and implanted with acoustic transmitters and passive integrated transponder (PIT)-tags at the Lower Granite Dam (LGR) Juvenile Fish Facility and at weirs located in tributaries of the Snake and Clearwater rivers upstream of LGR. Kelts were monitored as they moved downstream through the Federal Columbia River Power System (FCRPS) by 15 autonomous and 3 cabled acoustic receiver arrays. Cabled receiver arrays deployed on the dam faces allowed for three-dimensional tracking of fish as they approached the dam face and were used to determine the route of dam passage. Overall, 27.3% of the kelts tagged in this study successfully migrated to Martin Bluff (rkm 126, as measured from the mouth of the Columbia River), which is located downstream of all FCRPS dams. Within individual river reaches, survival per kilometer estimates ranged from 0.958 to 0.999; the lowest estimates were observed in the immediate forebay of FCRPS dams. Steelhead kelts tagged in this study passed over the spillway routes (spillway weirs, traditional spill bays) in greater proportions and survived at higher rates compared to the few fish passed through powerhouse routes (turbines and juvenile bypass systems). The results of this study provide information about the route of passage and subsequent survival of steelhead kelts that migrated through the Snake and Columbia rivers from LGR to Bonneville Dam in 2013. These data may be used by fisheries managers and dam operators to identify potential ways to increase the survival of kelts during their seaward migrations.« less

Mean Flow and Turbulence Characteristics of a Full-Scale Spiral Corrugated Culvert with Implications to Fish Passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Richmond, Marshall C.; Deng, Zhiqun; Guensch, Gregory R.

2007-08-01

A micro-Acoustic Doppler Velocimeter (ADV) was used to differentiate certain three-dimensional velocity and turbulence characteristics in a full-scale culvert with spiral corrugations. The culvert was set up in a test bed constructed to examine juvenile salmon passage success in various culvert types. The test culvert was 12.2 m long and 1.83m in diameter and set at a 1.14% slope. The corrugations were 2.54 cm deep by 7.62 cm peak to peak with a 5° right handed pitch. Tailwater elevation was adjustable with a stop-log system and was set slightly above the water surface level at the culvert exit. Cross-sectional gridsmore » of ADV measurements were taken at discharges of 28, 57, 113, 227, and 453 lps at 9 locations within the culvert barrel and just inside the headwater and tailwater tanks. Results indicated that the spiral corrugations caused asymmetries in the velocity and turbulence distributions creating a Reduced Velocity Zone (RVZ) on the right side of the culvert as seen looking upstream, which small fish could utilize to aide their upstream passage. Velocity and turbulence magnitudes in the RVZ were found to be less than in mid-channel or on the left of the culvert, and the difference became greater at increased flow rates. In addition, lateral and vertical velocity components within the RVZ were small relative to the downstream axial component, while lateral and vertical turbulence intensities were comparable to the axial component. Vorticity was found to be largest in amplitude near the culvert walls, and changed sign left of the culvert centerline. Inlet loss coefficients were calculated as well and ranged from 0.32 to 0.42. Relationships between velocity and turbulence intensity in the RVZ and average velocity were developed, which may be useful for evaluating the conditions under which the barrel of a culvert is passable for juvenile fish.« less

Use of Dual Frequency Identification Sonar to Determine Adult Chinook Salmon (Oncorhynchus tshawytscha) Escapement in the Secesh River, Idaho ; Annual Report, January 2008 – December 2008.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kucera, Paul A.

2009-06-26

Chinook salmon in the Snake River basin were listed as threatened under the Endangered Species Act in 1992 (NMFS 1992). The Secesh River represents the only stream in the Snake River basin where natural origin (wild) salmon escapement monitoring occurs at the population level, absent a supplementation program. As such the Secesh River has been identified as a long term salmon escapement and productivity monitoring site by the Nez Perce Tribe Department of Fisheries Resources Management. Salmon managers will use this data for effective population management and evaluation of the effect of conservation actions on a natural origin salmon population.more » The Secesh River also acts as a reference stream for supplementation program comparison. Dual frequency identification sonar (DIDSON) was used to determine adult spring and summer Chinook salmon escapement in the Secesh River in 2008. DIDSON technology was selected because it provided a non-invasive method for escapement monitoring that avoided listed species trapping and handling incidental mortality, and fish impedance related concerns. The DIDSON monitoring site was operated continuously from June 13 to September 14. The first salmon passage was observed on July 3. DIDSON site total estimated salmon escapement, natural and hatchery fish, was 888 fish {+-} 65 fish (95% confidence interval). Coefficient of variation associated with the escapement estimate was 3.7%. The DIDSON unit was operational 98.1% of the salmon migration period. Adult salmon migration timing in the Secesh River occurred over 74 days from July 3 to September 14, with 5,262 total fish passages observed. The spawning migration had 10%, median, and 90% passage dates of July 8, July 16, and August 12, respectively. The maximum number of net upstream migrating salmon was above the DIDSON monitoring site on August 27. Validation monitoring of DIDSON target counts with underwater optical cameras occurred for species identification. A total of 860 optical camera identified salmon passage observations were identical to DIDSON target counts. However, optical cameras identified eight jack salmon (3 upstream, 5 downstream) less than 55 cm in length that DIDSON did not count as salmon because of the length criteria employed ({ge} 55 cm). Precision of the DIDSON technology was evaluated by comparing estimated net upstream salmon escapement and associated 95% confidence intervals between two DIDSON sonar units operated over a five day period. The DIDSON 1 salmon escapement was 145.7 fish ({+-} 2.3), and the DIDSON 2 escapement estimate was 150.5 fish ({+-} 5). The overlap in the 95% confidence intervals suggested that the two escapement estimates were not significantly different from each other. Known length salmon carcass trials were conducted in 2008 to examine the accuracy of manually measured lengths, obtained using DIDSON software, on high frequency files at a 5 m window length. Linear regression demonstrated a highly significant relationship between known lengths and manually measured salmon carcass lengths (p < 0.0001). A positive bias in manual length measurement of 6.8% to 8% existed among the two observers in the analysis. Total Secesh River salmon escapement (natural origin and hatchery) in 2008 was 912 fish. Natural origin salmon escapement in the entire Secesh River drainage was 847 fish. The estimated natural origin spawner abundance was 836 fish. Salmon spawner abundance in 2008 increased by three fold compared to 2007 abundance levels. The 10 year geometric mean natural origin spawner abundance was 538 salmon and was below the recommended viable population threshold level established by the ICTRT (2007). One additional Snake River basin salmon population was assessed for comparison of natural origin salmon spawner abundance. The Johnson Creek/EFSF Salmon River population had a 10 year geometric mean natural origin spawner abundance of 254 salmon. Salmon spawner abundance levels in both streams were below viable population thresholds. DIDSON technology has been used in the Secesh River to determine salmon escapement over the past five years. The results suggest that DIDSON technology is reliable and can be used to generate accurate and precise estimates of salmon escapement if appropriate methods are used.« less

Micro-battery Development for Juvenile Salmon Acoustic Telemetry System Applications

NASA Astrophysics Data System (ADS)

Chen, Honghao; Cartmell, Samuel; Wang, Qiang; Lozano, Terence; Deng, Z. Daniel; Li, Huidong; Chen, Xilin; Yuan, Yong; Gross, Mark E.; Carlson, Thomas J.; Xiao, Jie

2014-01-01

The Endangered Species Act requires actions that improve the passage and survival rates for migrating salmonoids and other fish species that sustain injury and mortality when passing through hydroelectric dams. To develop a low-cost revolutionary acoustic transmitter that may be injected instead of surgically implanted into the fish, one major challenge that needs to be addressed is the micro-battery power source. This work focuses on the design and fabrication of micro-batteries for injectable fish tags. High pulse current and required service life have both been achieved as well as doubling the gravimetric energy density of the battery. The newly designed micro-batteries have intrinsically low impedance, leading to significantly improved electrochemical performances at low temperatures as compared with commercial SR416 batteries. Successful field trial by using the micro-battery powered transmitters injected into fish has been demonstrated, providing an exemplary model of transferring fundamental research into practical devices with controlled qualities.

Evaluation of an alternative to feeding whole frozen fish in belugas (Delphinapterus leucas).

PubMed

Mazzaro, Lisa M; Richmond, Julie P; Morgan, Jessica N; Kluever, Michaela E; Dunn, J Lawrence; Romano, Tracy A; Zinn, Steven A; Koutsos, Elizabeth A

2011-01-01

Feeding fish to captive piscivores can be challenging owing to cost, availability, variability in nutrient, and caloric composition, as well as handling and storage concerns. This trial evaluated the response of three belugas to being fed Fish Analog, an alternative to frozen fish. Body condition, gut transit time, serum chemistry and metabolic hormone analytes, immune function, and behavioral motivation were the dependent variables. Belugas (n=3) were fed various levels of Fish Analog (0-50%) over a 6-month period, and follow-up studies were conducted to further examine several dependent variables. When provided in gradually increasing amounts, belugas consumed the Fish Analog, with only minor fecal consistency changes and without behavioral responses indicative of gastric discomfort. Axillary girth and blubber thickness were positively correlated, and did not differ significantly with changes in the percentage of Fish Analog fed. Individual animal variation in initial passage time, some serum chemistry analytes, and immune function differences were noted following feeding of Fish Analog. Feeding Fish Analog reduced blood n9 fatty acids compared with captive belugas fed no Fish Analog. Feeding a DHA-enriched Fish Analog increased several n3 fatty acids, including eicosapentaenoic acid, but not DHA, compared with whales fed no Fish Analog or non-DHA-enriched Fish Analog. Fish Analog was shown to be a viable alternative to feeding fish at up to 50% of the dietary caloric density. © 2010 Wiley-Liss, Inc.

Guiding out-migrating juvenile sea lamprey (Petromyzon marinus) with pulsed direct current

USGS Publications Warehouse

Johnson, Nicholas S.; Miehls, Scott M.

2014-01-01

Non-physical stimuli can deter or guide fish without affecting water flow or navigation and therefore have been investigated to improve fish passage at anthropogenic barriers and to control movement of invasive fish. Upstream fish migration can be blocked or guided without physical structure by electrifying the water, but directional downstream fish guidance with electricity has received little attention. We tested two non-uniform pulsed direct current electric systems, each having different electrode orientations (vertical versus horizontal), to determine their ability to guide out-migrating juvenile sea lamprey (Petromyzon marinus) and rainbow trout (Oncorhynchus mykiss). Both systems guided significantly more juvenile sea lamprey to a specific location in our experimental raceway when activated than when deactivated, but guidance efficiency decreased at the highest water velocities tested. At the electric field setting that effectively guided sea lamprey, rainbow trout were guided by the vertical electrode system, but most were blocked by the horizontal electrode system. Additional research should characterize the response of other species to non-uniform fields of pulsed DC and develop electrode configurations that guide fish over a range of water velocity.

Ascent of neotropical migratory fish in the Itaipu Reservoir fish pass

USGS Publications Warehouse

Makrakis, S.; Miranda, L.E.; Gomes, L.C.; Makrakis, M.C.; Junior, H.M.F.

2011-01-01

The Piracema Canal is a complex 10-km fish pass system that climbs 120m to connect the Paran?? River to the Itaipu Reservoir along the Brazil-Paraguay border. The canal was constructed to allow migratory fishes to reach suitable habitats for reproduction and feeding in tributaries upstream from the reservoir. The Piracema Canal attracted 17 of the 19 long-distance migratory species that have been recorded in the Paran?? River Basin and Paraguay-Paran?? Basin. However, the incidence of migratory fish decreased from downstream to upstream, with the pattern of decrease depending on species. Overall, 0.5% of the migratory fish that entered the Piracema Canal and segment 1, eventually were able to reach segment 5 and potentially Itaipu Reservoir. Ascension rate was examined relative to various physical attributes of canal segments; maximum water velocity emerged as the most influential variable affecting fish passage. Water velocity may be manipulated by controlling water discharge, and by re-engineering critical sections of the canal. Because the Itaipu Reservoir flooded a set of falls that separated two distinct biogeographical regions, facilitating fish movements through the Piracema Canal into the Itaipu Reservoir presents a management dilemma that requires deliberation in the context of the fish assemblages rather than on selected migratory species. ?? 2010 John Wiley & Sons, Ltd.

Seed dispersal by fishes in tropical and temperate fresh waters: The growing evidence

NASA Astrophysics Data System (ADS)

Horn, Michael H.; Correa, Sandra Bibiana; Parolin, Pia; Pollux, B. J. A.; Anderson, Jill T.; Lucas, Christine; Widmann, Peter; Tjiu, Albertus; Galetti, Mauro; Goulding, Michael

2011-11-01

Fruit-eating by fishes represents an ancient (perhaps Paleozoic) interaction increasingly regarded as important for seed dispersal (ichthyochory) in tropical and temperate ecosystems. Most of the more than 275 known frugivorous species belong to the mainly Neotropical Characiformes (pacus, piranhas) and Siluriformes (catfishes), but cypriniforms (carps, minnows) are more important in the Holarctic and Indomalayan regions. Frugivores are among the most abundant fishes in Neotropical floodplains where they eat the fruits of a wide variety of trees and shrubs. By consuming fruits, fishes gain access to rich sources of carbohydrates, lipids and proteins and act as either seed predators or seed dispersers. With their often high mobility, large size, and great longevity, fruit-eating fishes can play important roles as seed dispersers and exert strong influences on local plant-recruitment dynamics and regional biodiversity. Recent feeding experiments focused on seed traits after gut passage support the idea that fishes are major seed dispersers in floodplain and riparian forests. Overfishing, damming, deforestation and logging potentially diminish ichthyochory and require immediate attention to ameliorate their effects. Much exciting work remains in terms of fish and plant adaptations to ichthyochory, dispersal regimes involving fishes in different ecosystems, and increased use of nondestructive methods such as stomach lavage, stable isotopes, genetic analyses and radio transmitters to determine fish diets and movements.

75 FR 16453 - Domtar Maine LLC; Notice of Petition for Declaratory Order and Soliciting Comments, Protests, and...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-01

..., containing a gated timber spillway structure 65 feet wide, with 3 gates and a fish passage facility; (2) a... timber crib structure, 485 feet long and 13 feet high, containing a gated spillway structure, 77 feet... appurtenances; and (B) Sysladobsis Lake development: (1) Sysladobsis Lake Dam, an earth embankment structure...

Long-term bed degradation in Maryland streams (Phase III Part 2) : urban streams in the Piedmont Plateau Province : research report : final report.

DOT National Transportation Integrated Search

2017-02-01

Estimation of potential long-term down-cutting of the stream bed is necessary for evaluation and design of bridges for scour and culverts for fish passage. The purpose of this study has been to improve predictions of this potential long-term bed degr...

76 FR 7807 - Thorne Bay Ranger District; Alaska; Big Thorne Project Environmental Impact Statement

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-11

... whether or not to authorize timber harvest and associated road construction on Prince of Wales Island in... include the repair of road culverts that do not meet current standards for the passage of fish; recreation... timber sales. Approximately 37 miles of National Forest System and temporary roads would be constructed...

Shape design of internal cooling passages within a turbine blade

NASA Astrophysics Data System (ADS)

Nowak, Grzegorz; Nowak, Iwona

2012-04-01

The article concerns the optimization of the shape and location of non-circular passages cooling the blade of a gas turbine. To model the shape, four Bezier curves which form a closed profile of the passage were used. In order to match the shape of the passage to the blade profile, a technique was put forward to copy and scale the profile fragments into the component, and build the outline of the passage on the basis of them. For so-defined cooling passages, optimization calculations were carried out with a view to finding their optimal shape and location in terms of the assumed objectives. The task was solved as a multi-objective problem with the use of the Pareto method, for a cooling system composed of four and five passages. The tool employed for the optimization was the evolutionary algorithm. The article presents the impact of the population on the task convergence, and discusses the impact of different optimization objectives on the Pareto optimal solutions obtained. Due to the problem of different impacts of individual objectives on the position of the solution front which was noticed during the calculations, a two-step optimization procedure was introduced. Also, comparative optimization calculations for the scalar objective function were carried out and set up against the non-dominated solutions obtained in the Pareto approach. The optimization process resulted in a configuration of the cooling system that allows a significant reduction in the temperature of the blade and its thermal stress.

Measuring Ucrit and endurance: equipment choice influences estimates of fish swimming performance.

PubMed

Kern, P; Cramp, R L; Gordos, M A; Watson, J R; Franklin, C E

2018-01-01

This study compared the critical swimming speed (U crit ) and endurance performance of three Australian freshwater fish species in different swim-test apparatus. Estimates of U crit measured in a large recirculating flume were greater for all species compared with estimates from a smaller model of the same recirculating flume. Large differences were also observed for estimates of endurance swimming performance between these recirculating flumes and a free-surface swim tunnel. Differences in estimates of performance may be attributable to variation in flow conditions within different types of swim chambers. Variation in estimates of swimming performance between different types of flumes complicates the application of laboratory-based measures to the design of fish passage infrastructure. © 2017 The Fisheries Society of the British Isles.

A standardized method of propagating the marine fish parasite, Amyloodinium ocellatum.

PubMed

Bower, C E; Turner, D T; Biever, R C

1987-02-01

The peridinian dinoflagellate Amyloodinium ocellatum was propagated by serial passage in clownfish (Amphiprion ocellaris) and hybrid striped bass (Morone chrysops X Morone saxatilis). Each 25-50-mm fish was exposed to 4,000-6,000 dinospores in 400 ml of artificial seawater for 30 min. Two days after exposure, trophonts were harvested by immersing the fishes in fresh water. After encystment, tomonts were axenized by multiple washes with sterile distilled water and sterile artificial seawater containing penicillin and streptomycin, and then incubated in the antibiotic solution. High yields of both tomonts and dinospores of the same sizes and ages were obtained, and host mortalities were eliminated. Microbial growth in incubating cultures was inhibited until after dinospores had emerged from tomonts, and dinospores remained infective for at least 4 days at 26 C.

Project Planning for Cougar Dam during 2010

USGS Publications Warehouse

Haskell, Craig A.; Tiffan, Kenneth F.

2011-01-01

Cougar Dam is a 158 m-tall, rock fill dam located about 63 km east of Springfield, Oregon. Completed in 1963, the dam is owned and operated by the U.S. Army Corps of Engineers (USACE). It impounds Cougar Reservoir, which is 9.7 km long, has a surface area of 518 ha, and is predominately used for flood control. The pool elevation typically ranges from a maximum conservation pool of 515 m (1,690 ft) National Geodetic Vertical Datum (NGVD) in summer to a minimum flood control elevation of 467 m (1,532 ft NGVD) in winter. The reservoir thermally stratifies in the summer, has an average depth of 37 m, and holds 153,500 acre-feet when full. Cougar Dam is located on the South Fork of the McKenzie River 7 km upstream from the mainstem McKenzie River, a tributary of the Willamette River. The McKenzie River Basin basin supports the largest remaining population of wild spawning spring Chinook salmon in the Willamette River Basin (National Oceanic and Atmospheric Administration; NOAA, 2008). Cougar Dam and others were collectively deemed to cause jeopardy to the sustainability of anadromous fish stocks in the Willamette River Basin (NOAA, 2008). Prior to dam construction, as many as 805 redds were observed in the South Fork of the McKenzie River (Willis and others, 1960) and it is estimated that 40 km of spawning habitat were lost when access was blocked after dam construction. The 2008 Willamette Biological Opinion (BIOP) requires improvements to operations and structures to reduce impacts on Upper Willamette River (UWR) Chinook salmon (Oncorhynchus tshawytscha) and UWR steelhead (O. mykiss; NOAA, 2008). In 2010, an adult fish collection facility was completed below Cougar Dam to collect returning adult salmon for transport to spawning habitats above the dam. Before that time, returning adult spring Chinook salmon were transported to upstream spawning areas as part of a trap-and-haul program with adults passed ranging annually from 0 to 1,038 (Taylor, 2000). The progeny of adult fish that are allowed to spawn above Cougar Dam move downstream into Cougar Reservoir in the spring. Under the BIOP, the USACE is required to provide downstream fish passage or operational alternatives at Cougar Dam by 2014. Currently, there is little information about the seasonal timing of reservoir entry of juvenile Chinook salmon and what habitats they and other fishes use in the reservoir. However, rotary screw traps placed in the outlet channel below the dam indicate peak juvenile passage coinciding with seasonally low pool elevation in mid December and late January. It is unknown whether juveniles upstream of Cougar Dam can be captured in large enough numbers for tagging and subsequent survival studies to proceed. These studies are needed to examine the feasibility of installing downstream fish passage structures at Cougar Dam to meet BIOP requirements. Therefore, the USACE contracted with the U.S. Geological Survey (USGS) to test the efficacy of using a mid-water trawl and lampara seine to capture fish in Cougar Reservoir on three consecutive days in the fall of 2010. These collection methods could potentially provide fish for feasibility and subsequent survival studies and as verification of fish targets in future active hydroacoustic surveys.

Comparative Performance of Acoustic-tagged and PIT-tagged Juvenile Salmonids

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hockersmith, Eric E.; Brown, Richard S.; Liedtke, Theresa L.

2008-02-01

Numerous research tools and technologies are currently being used to evaluate fish passage and survival to determine the impacts of the Federal Columbia River Power System (FCRPS) on endangered and threatened juvenile salmonids, including PIT tags, balloon tags, hydroacoustic evaluations, radio telemetry, and acoustic telemetry. Each has advantages and disadvantages, but options are restricted in some situations because of limited capabilities of a specific technology, lack of detection capability downstream, or availability of adequate numbers of fish. However, there remains concern about the comparative effects of the tag or the tagging procedure on fish performance. The recently developed Juvenile Salmonidmore » Acoustic Telemetry System (JSATS) acoustic transmitter is the smallest active acoustic tag currently available. The goal of this study was to determine whether fish tagged with the JSATS acoustic-telemetry tag can provide unbiased estimates of passage behavior and survival within the performance life of the tag. We conducted both field and laboratory studies to assess tag effects. For the field evaluation we released a total of 996 acoustic-tagged fish in conjunction with 21,026 PIT-tagged fish into the tailrace of Lower Granite Dam on 6 and 13 May. Travel times between release and downstream dams were not significantly different for the majority of the reaches between acoustic-tagged and PIT-tagged fish. In addition to the field evaluation, a series of laboratory experiments were conducted to determine if growth and survival of juvenile Chinook salmon surgically implanted with acoustic transmitters is different than untagged or PIT tagged juvenile Chinook salmon. Only yearling fish with integrated and non-integrated transmitters experienced mortalities, and these were low (<4.5%). Mortality among sub-yearling control and PIT-tag treatments ranged up to 7.7% while integrated and non-integrated treatments had slightly higher rates (up to 8.3% and 7.9% respectively). No acoustic transmitters were shed by yearling fish during the course of the 90 day study. Up to 7.8% of subyearling fish expelled transmitters. Tags were expelled from 5 to 63 days post-surgery. The average time to expulsion was 27 days; few fish expelled transmitters within 14 days of implantation or less. Histological results suggest that inflammation associated with implantation of an acoustic transmitter can produce fibrous tissue which can invade and possibly damage internal organs soon after implantation. Reactions severe enough to damage organs however, were limited to only ~20% of subyearling Chinook salmon, all of which were under 101mm and 12g at tagging. The infiltration of the fibrous tissue into organs was observed most often in fish held for 21 days and appeared to decrease in subsequent holding times.« less

Dispersal and dam passage of sonic-tagged juvenile lake sturgeon in the upper Tennessee River

USGS Publications Warehouse

Collier, William R.; Bettoli, Phillip William; Scholten, George D.

2011-01-01

More than 90,000 state-endangered lake sturgeon (Acipenser fulvescens) have been stocked into the French Broad River, Holston River, and Fort Loudoun Lake in the upper Tennessee River system. Although incidental reports of anglers catching these fish have increased, little is known about their fate after stocking. Therefore, this study was conducted to evaluate lake sturgeon dispersal throughout the system. Seven submersible ultrasonic receivers were deployed in the upper Tennessee River system and 37 juvenile fish (mean fork length = 660 mm) were surgically implanted with ultrasonic transmitters in the fall of 2007. These fish were stocked at two sites in the headwaters of Fort Loudoun Lake. The receivers logged 1,345 detections of tagged fish and manual tracking located 32 of the 37 tagged lake sturgeon over 21 months. Ten (31%) tagged fish passed through Fort Loudoun Dam and were located downstream in the headwaters of Watts Bar Reservoir; the other tagged fish were still at large above Fort Loudoun Dam when tracking ceased in 2009. Of all fish stocked, three (9%) were last located in the French Broad River and none were located in the Holston River.

Research on polar bears in Alaska, 1983-1985

USGS Publications Warehouse

Amstrup, Steven C.

1986-01-01

Research on the ecology and status of polar bear populations in Alaska has continued since 1967. Research was a joint U.S. Fish and Wildlife Service/Alaska Department of Fish and Game effort until passage of the Marine Mammal Protection Act in 1972, and has been largely a Federal effort since then. In 1985, Alaskan polar beer research continues to be carried out by the Research Division of the U.S. Fish and Wildlife Service (DOI). A recent reorganization removed authority for ecological research in Alaska from the Denver Wildlife Research Center, and vested it with the newly created Alaska Office of Fish and Wildlife Research. This new research office is the center for Federal fish and Wildlife related research throughout the state of Alaska and in its coastal waters.Although the responsibility for polar bear research lies with the U.S. Fish and Wildlife Service, numerous other organizations and agencies deserve mention for their cooperation and support of the ongoing research. These include: the U.S. National Oceanic and Atmospheric Administration (DOC), The U.S. Minerals Management Service (DOI), The Canadian Wildlife Service, The Northwest Territories Wildlife Service, the Yukon Wildlife Service, Dome Petroleum Ltd, Gulf Canada, and the Alaska Department of Fish and game.

Movement and spawning of American shad transported above dams on the Roanoke River, North Carolina and Virginia

USGS Publications Warehouse

Harris, Julianne E.; Hightower, Joseph E.

2011-01-01

American shad Alosa sapidissima are in decline throughout much of their native range as a result of overfishing, pollution, and habitat alteration in coastal rivers where they spawn. One approach to restoration in regulated rivers is to provide access to historical spawning habitat above dams through a trap-and-transport program. We examined the initial survival, movement patterns, spawning, and downstream passage of sonic-tagged adult American shad transported to reservoir and riverine habitats upstream of hydroelectric dams on the Roanoke River, North Carolina and Virginia, during 2007–2009. Average survival to release in 2007–2008 was 85%, but survival decreased with increasing water temperature. Some tagged fish released in reservoirs migrated upstream to rivers; however, most meandered back and forth within the reservoir. A higher percentage of fish migrated through a smaller (8,215-ha) than a larger (20,234-ha) reservoir, suggesting that the population-level effects of transport may depend on upper basin characteristics. Transported American shad spent little time in upper basin rivers but were there when temperatures were appropriate for spawning. No American shad eggs were collected during weekly plankton sampling in upper basin rivers. The estimated initial survival of sonic-tagged American shad after downstream passage through each dam was 71–100%; however, only 1% of the detected fish migrated downstream through all three dams and many were relocated just upstream of a dam late in the season. Although adult American shad were successfully transported to upstream habitats in the Roanoke River basin, under present conditions transported individuals may have reduced effective fecundity and postspawning survival compared with nontransported fish that spawn in the lower Roanoke River.

Movement Patterns of American Shad Transported Upstream of Dams on The Roanoke River, North Carolina and Virginia

USGS Publications Warehouse

Harris, Julianne E.; Hightower, J.E.

2011-01-01

American shad Alosa sapidissima are in decline throughout much of their native range as a result of overfishing, pollution, and habitat alteration in coastal rivers where they spawn. One approach to restoration in regulated rivers is to provide access to historical spawning habitat above dams through a trap-and-transport program. We examined the initial survival, movement patterns, spawning, and downstream passage of sonic-tagged adult American shad transported to reservoir and riverine habitats upstream of hydroelectric dams on the Roanoke River, North Carolina and Virginia, during 2007–2009. Average survival to release in 2007–2008 was 85%, but survival decreased with increasing water temperature. Some tagged fish released in reservoirs migrated upstream to rivers; however, most meandered back and forth within the reservoir. A higher percentage of fish migrated through a smaller (8,215-ha) than a larger (20,234-ha) reservoir, suggesting that the population-level effects of transport may depend on upper basin characteristics. Transported American shad spent little time in upper basin rivers but were there when temperatures were appropriate for spawning. No American shad eggs were collected during weekly plankton sampling in upper basin rivers. The estimated initial survival of sonic-tagged American shad after downstream passage through each dam was 71–100%; however, only 1% of the detected fish migrated downstream through all three dams and many were relocated just upstream of a dam late in the season. Although adult American shad were successfully transported to upstream habitats in the Roanoke River basin, under present conditions transported individuals may have reduced effective fecundity and postspawning survival compared with nontransported fish that spawn in the lower Roanoke River.

Temporary Restoration of Bull Trout Passage at Albeni Falls Dam, 2008 Progress Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bellgraph, Brian J.

2009-03-31

The goal of this project is to provide temporary upstream passage of bull trout around Albeni Falls Dam on the Pend Oreille River, Idaho. Our specific objectives are to capture fish downstream of Albeni Falls Dam, tag them with combination acoustic and radio transmitters, release them upstream of Albeni Falls Dam, and determine if genetic information on tagged fish can be used to accurately establish where fish are located during the spawning season. In 2007, radio receiving stations were installed at several locations throughout the Pend Oreille River watershed to detect movements of adult bull trout; however, no bull troutmore » were tagged during that year. In 2008, four bull trout were captured downstream of Albeni Falls Dam, implanted with transmitters, and released upstream of the dam at Priest River, Idaho. The most-likely natal tributaries of bull trout assigned using genetic analyses were Grouse Creek (N = 2); a tributary of the Pack River, Lightning Creek (N = 1); and Rattle Creek (N = 1), a tributary of Lightning Creek. All four bull trout migrated upstream from the release site in Priest River, Idaho, were detected at monitoring stations near Dover, Idaho, and were presumed to reside in Lake Pend Oreille from spring until fall 2008. The transmitter of one bull trout with a genetic assignment to Grouse Creek was found in Grouse Creek in October 2008; however, the fish was not found. The bull trout assigned to Rattle Creek was detected in the Clark Fork River downstream from Cabinet Gorge Dam (approximately 13 km from the mouth of Lightning Creek) in September but was not detected entering Lightning Creek. The remaining two bull trout were not detected in 2008 after detection at the Dover receiving stations. This report details the progress by work element in the 2008 statement of work, including data analyses of fish movements, and expands on the information reported in the quarterly Pisces status reports.« less

Coupling systematic planning and expert judgement enhances the efficiency of river restoration.

PubMed

Langhans, Simone D; Gessner, Jörn; Hermoso, Virgilio; Wolter, Christian

2016-08-01

Ineffectiveness of current river restoration practices hinders the achievement of ecological quality targets set by country-specific regulations. Recent advances in river restoration help planning efforts more systematically to reach ecological targets at the least costs. However, such approaches are often desktop-based and overlook real-world constraints. We argue that combining two techniques commonly used in the conservation arena - expert judgement and systematic planning - will deliver cost-effective restoration plans with a high potential for implementation. We tested this idea targeting the restoration of spawning habitat, i.e. gravel bars, for 11 rheophilic fish species along a river system in Germany (Havel-Spree rivers). With a group of local fish experts, we identified the location and extent of potential gravel bars along the rivers and necessary improvements to migration barriers to ensure fish passage. Restoration cost of each gravel bar included the cost of the action itself plus a fraction of the cost necessary to ensure longitudinal connectivity by upgrading or building fish passages located downstream. We set restoration targets according to the EU Water Framework Directive, i.e. relative abundance of 11 fish species in the reference community and optimised a restoration plan by prioritising a subset of restoration sites from the full set of identified sites, using the conservation planning software Marxan. Out of the 66 potential gravel bars, 36 sites which were mainly located in the downstream section of the system were selected, reflecting their cost-effectiveness given that fewer barriers needed intervention. Due to the limited overall number of sites that experts identified as being suitable for restoring spawning habitat, reaching abundance-targets was challenged. We conclude that coupling systematic river restoration planning with expert judgement produces optimised restoration plans that account for on-the-ground implementation constraints. If applied, this approach has a high potential to enhance overall efficiency of future restoration efforts. Copyright © 2016 Elsevier B.V. All rights reserved.

Hydraulic and biological analysis of the passability of select fish species at the U.S. Geological Survey streamgaging weir at Blackwells Mills, New Jersey

USGS Publications Warehouse

Haro, Alexander J.; Mulligan, Kevin; Suro, Thomas P.; Noreika, John; McHugh, Amy

2017-10-16

Recent efforts to advance river connectivity for the Millstone River watershed in New Jersey have led to the evaluation of a low-flow gauging weir that spans the full width of the river. The methods and results of a desktop modelling exercise were used to evaluate the potential ability of three anadromous fish species (Alosa sapidissima [American shad], Alosa pseudoharengus [alewife], and Alosa aestivalis [blueback herring]) to pass upstream over the U.S. Geological Survey Blackwells Mills streamgage (01402000) and weir on the Millstone River, New Jersey, at various streamflows, and to estimate the probability that the weir will be passable during the spring migratory season. Based on data from daily fishway counts downstream from the Blackwells Mills streamgage and weir between 1996 and 2014, the general migratory period was defined as April 14 to May 28. Recorded water levels and flow data were used to theoretically estimate water depths and velocities over the weir, as well as flow exceedances occurring during the migratory period.Results indicate that the weir is a potential depth barrier to fish passage when streamflows are below 200 cubic feet per second using a 1-body-depth criterion for American shad (the largest fish among the target species). Streamflows in that range occur on average 35 percent of the time during the migratory period. An increase of the depth criterion to 2 body depths causes the weir to become a possible barrier to passage when flows are below 400 cubic feet per second. Streamflows in that range occur on average 73 percent of the time during the migration season. Average cross-sectional velocities at several points along the weir do not seem to be limiting to the fish migration, but maximum theoretical velocities estimated without friction loss over the face of the weir could be potentially limiting.

Fish Passage Assessment: Big Canyon Creek Watershed, Technical Report 2004.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Christian, Richard

2004-02-01

This report presents the results of the fish passage assessment as outlined as part of the Protect and Restore the Big Canyon Creek Watershed project as detailed in the CY2003 Statement of Work (SOW). As part of the Northwest Power Planning Council's Columbia Basin Fish and Wildlife Program (FWP), this project is one of Bonneville Power Administration's (BPA) many efforts at off-site mitigation for damage to salmon and steelhead runs, their migration, and wildlife habitat caused by the construction and operation of federal hydroelectric dams on the Columbia River and its tributaries. The proposed restoration activities within the Big Canyonmore » Creek watershed follow the watershed restoration approach mandated by the Fisheries and Watershed Program. Nez Perce Tribal Fisheries/Watershed Program vision focuses on protecting, restoring, and enhancing watersheds and treaty resources within the ceded territory of the Nez Perce Tribe under the Treaty of 1855 with the United States Federal Government. The program uses a holistic approach, which encompasses entire watersheds, ridge top to ridge top, emphasizing all cultural aspects. We strive toward maximizing historic ecosystem productive health, for the restoration of anadromous and resident fish populations. The Nez Perce Tribal Fisheries/Watershed Program (NPTFWP) sponsors the Protect and Restore the Big Canyon Creek Watershed project. The NPTFWP has the authority to allocate funds under the provisions set forth in their contract with BPA. In the state of Idaho vast numbers of relatively small obstructions, such as road culverts, block thousands of miles of habitat suitable for a variety of fish species. To date, most agencies and land managers have not had sufficient, quantifiable data to adequately address these barrier sites. The ultimate objective of this comprehensive inventory and assessment was to identify all barrier crossings within the watershed. The barriers were then prioritized according to the amount of habitat blocked at each site and the fish life history stages impacted. This assessment protocol will hopefully prove useful to other agencies and become a model for use in other watersheds.« less

A traits-based approach for prioritizing species for monitoring and surrogacy selection

DOE PAGES

Pracheil, Brenda M.; McManamay, Ryan A.; Bevelhimer, Mark S.; ...

2016-11-28

The bar for justifying the use of vertebrate animals for study is being increasingly raised, thus requiring increased rigor for species selection and study design. Although we have power analyses to provide quantitative backing for the numbers of organisms used, quantitative backing for selection of study species is not frequently employed. This can be especially important when measuring the impacts of ecosystem alteration, when study species must be chosen that are both sensitive to the alteration and of sufficient abundance for study. Just as important is providing justification for designation of surrogate species for study, especially when the species ofmore » interest is rare or of conservation concern and selection of an appropriate surrogate can have legal implications. In this study, we use a combination of GIS, a fish traits database and multivariate statistical analyses to quantitatively prioritize species for study and to determine potential study surrogate species. We provide two case studies to illustrate our quantitative, traits-based approach for designating study species and surrogate species. In the first case study, we select broadly representative fish species to understand the effects of turbine passage on adult fishes based on traits that suggest sensitivity to turbine passage. In our second case study, we present a framework for selecting a surrogate species for an endangered species. Lastly, we suggest that our traits-based framework can provide quantitative backing and added justification to selection of study species while expanding the inference space of study results.« less

A rehabilitation plan for walleye populations and habitats in Lake Superior

USGS Publications Warehouse

Hoff, Michael H.

2003-01-01

The walleye (Stizostedion vitreum vitreum) has been historically important in regional fisheries and fish communities in large bays, estuaries, and rivers of Lake Superior. Significant negative impacts on the species caused by overharvesting, habitat degradation, and pollution during the late 1800s and early 1900s have led to the preparation of a strategic rehabilitation plan. The lakewide goal is to maintain, enhance, and rehabilitate habitat for walleye and to establish self-sustaining populations in areas where walleyes historically lived. Population objectives that support the goal are to increase the abundance of juvenile and adult walleyes in selected areas. Habitat objectives that support the goal include increasing spawning and nursery habitat in four areas: enhancing fish passage, reducing sedimentation, increasing water quality, and reducing contaminants in walleyes. Progress toward achieving the habitat objectives should be measured by documenting increases in spawning and nursery habitats, resolving fish-passage issues, reducing sediments in rivers, and reducing contaminant levels in walleyes. Stocking various life stages of walleye should be considered to rehabilitate certain degraded populations. Total annual mortality of walleye populations should be less than 45% to allow populations to either increase or be maintained at target levels of abundance. Routine assessments should focus on gathering the data necessary to evaluate abundance and mortality and on taking inventories of spawning and nursery habitats. Research should be conducted to understand the specific habitat requirements for Lake Superior walleye populations and the habitat-abundance relationships for populations and for the lake as a whole.

Changes in fish communities following recolonization of the Cedar river, Wa, USA by Pacific salmon after 103 years of local extirpation

USGS Publications Warehouse

Kiffney, P.M.; Pess, G.R.; Anderson, J.H.; Faulds, P.; Burton, Kenneth; Riley, S.C.

2009-01-01

Migration barriers are a major reason for species loss and population decline of freshwater organisms. Significant efforts have been made to remove or provide passage around these barriers; however, our understanding of the ecological effects of these efforts is minimal. Installation of a fish passage facility at the Landsburg Dam, WA, USA provided migratory fish access to habitat from which they had been excluded for over 100 years. Relying on voluntary recruitment, we examined the effectiveness of this facility in restoring coho (Oncorhynchus kisutch) salmon populations above the diversion, and whether reintroduction of native anadromous species affected the distribution and abundance of resident trout (O. mykiss and O. clarki). Before the ladder, late summer total salmonid (trout only) density increased with distance from the dam. This pattern was reversed after the ladder was opened, as total salmonid density (salmon {thorn} trout) approximately doubled in the three reaches closest to the dam. These changes were primarily due to the addition of coho, but small trout density also increased in lower reaches and decreased in upper reaches. A nearby source population, dispersal by adults and juveniles, low density of resident trout and high quality habitat above the barrier likely promoted rapid colonization of targeted species. Our results suggest that barrier removal creates an opportunity for migratory species to re-establish populations leading to range expansion and potentially to increased population size. ?? 2008 John Wiley & Sons, Ltd.

A traits-based approach for prioritizing species for monitoring and surrogacy selection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pracheil, Brenda M.; McManamay, Ryan A.; Bevelhimer, Mark S.

The bar for justifying the use of vertebrate animals for study is being increasingly raised, thus requiring increased rigor for species selection and study design. Although we have power analyses to provide quantitative backing for the numbers of organisms used, quantitative backing for selection of study species is not frequently employed. This can be especially important when measuring the impacts of ecosystem alteration, when study species must be chosen that are both sensitive to the alteration and of sufficient abundance for study. Just as important is providing justification for designation of surrogate species for study, especially when the species ofmore » interest is rare or of conservation concern and selection of an appropriate surrogate can have legal implications. In this study, we use a combination of GIS, a fish traits database and multivariate statistical analyses to quantitatively prioritize species for study and to determine potential study surrogate species. We provide two case studies to illustrate our quantitative, traits-based approach for designating study species and surrogate species. In the first case study, we select broadly representative fish species to understand the effects of turbine passage on adult fishes based on traits that suggest sensitivity to turbine passage. In our second case study, we present a framework for selecting a surrogate species for an endangered species. Lastly, we suggest that our traits-based framework can provide quantitative backing and added justification to selection of study species while expanding the inference space of study results.« less

Development of live attenuated Streptococcus agalactiae vaccine for tilapia via continuous passage in vitro.

PubMed

Li, L P; Wang, R; Liang, W W; Huang, T; Huang, Y; Luo, F G; Lei, A Y; Chen, M; Gan, X

2015-08-01

Fish Streptococcus agalactiae (S. agalactiae) seriously harms the world's aquaculture industry and causes huge economic losses. This study aimed to develop a potential live attenuated vaccine of S. agalactiae. Pre-screened vaccine candidate strain S. agalactiae HN016 was used as starting material to generate an attenuated strain S. agalactiae YM001 by continuous passage in vitro. The biological characteristics, virulence, and stability of YM001 were detected, and the protective efficacy of YM001 immunization in tilapia was also determined. Our results indicated that the growth, staining, characteristics of pulsed-field gel electrophoresis (PFGE) genotype, and virulence of YM001 were changed significantly as compared to the parental strain HN016. High doses of YM001 by intraperitoneal (IP) injection (1.0 × 10(9) CFU/fish) and oral gavage (1.0 × 10(10) CFU/fish) respectively did not cause any mortality and morbidity in tilapia. The relative percent survivals (RPSs) of fishes immunized with YM001 (1.0 × 10(8) CFU/fish, one time) via injection, immersion, and oral administration were 96.88, 67.22, and 71.81%, respectively, at 15 days, and 93.61, 60.56, and 53.16%, respectively, at 30 days. In all tests with 1-3 times of immunization in tilapia, the dosages at 1 × 10(8) and 1 × 10(9) CFU/fish displayed the similar best results, whereas the immunoprotection of the dosages at 1 × 10(6) and 1 × 10(7) CFU/fish declined significantly (P < 0.01), and 1 × 10(5) CFU/fish hardly displayed any protective effect. In addition, the efficacy of 2-3 times of immunization was significantly higher than that of single immunization (P < 0.01) while no significant difference in the efficacy between twice and thrice of immunization was seen (P > 0.05). The level of protective antibody elicited by oral immunization was significantly higher compared to that of the control group (P < 0.01), and the antibody reached their maximum levels 14-21 days after the immunization but decreased significantly after 28 days of vaccination. YM001 bacteria were isolated from the brain, liver, kidney, and spleen tissues of fish after oral immunization and the bacteria existed for the longest time in the spleen (up to 15 days). Taken together, this study obtained a safe, stable, and highly immunogenic attenuated S. agalactiae strain YM001; oral immunization of tilapia with this strain produced a good immune protection. Copyright © 2015 Elsevier Ltd. All rights reserved.

Radiated noise from commercial ships in the Gulf of Maine: implications for whale/vessel collisions.

PubMed

Allen, J Kaitlyn; Peterson, Michael L; Sharrard, George V; Wright, Dana L; Todd, Sean K

2012-09-01

To understand mysticete acoustic-based detection of ships, radiated noise from high-speed craft, cruise ships, catamarans and fishing vessels was recorded June-September 2009. Calibrated acoustic data (<2500 Hz) from a vertical hydrophone array was combined with ship passage information. A cruise ship had the highest broadband source level, while a fishing vessel had the lowest. Ship noise radiated asymmetrically and varied with depth. Bow null-effect acoustic shadow zones were observed for all ship classes and were correlated with ship-length-to-draft-ratios. These shadow zones may reduce ship detection by near-surface mysticetes.

U. of Puget Sound Freshman Orientation Mixes Outdoor Fun with Academic Work-and Helps Boost the Graduation Rate.

ERIC Educational Resources Information Center

Collison, Michele N-K.

1989-01-01

An innovative orientation program for freshmen at the University of Puget Sound called Passages and Preludes mixes outdoor fun with academic work. They meet in small groups with faculty members who introduce them to college-level reading and writing. For another two days the students hike, sail, fish and canoe. (MLW)

Using Songbird Monitoring to Guide and Evaluate Riparian Restoration in Salmonid-Focused Stream Rehabilitation Projects

Treesearch

Ryan D. Burnett; Thomas Gardali; Geoffrey R. Geupel

2005-01-01

A restoration effort, primarily focused on reducing stranding and improving passage of anadromous fish, has been undertaken along sections of lower Clear Creek, Shasta County, California. Similar projects are occurring throughout California and, indeed, all of North America. To monitor the effects of these efforts at Clear Creek we implemented a multi-faceted songbird...

Chapter 4. Bonneville cutthroat trout

Treesearch

Jeffrey L. Kershner

1995-01-01

In this little stream, the trout are more abundant than we have yet seen them. One of our sober men took, this afternoon, upward of thirty pounds. These fish would probably average fifteen or sixteen inches in length, and weigh three-quarters of a pound; occasionally, however, a much larger one is seen." This passage from the journal of John Townsend, a trader...

33 CFR 334.350 - Chesapeake Bay off Fort Monroe, Va.; firing range danger zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... suspended as long as any vessel is within the danger zone. (3) Passage of vessels through the area will not be prohibited at any time, nor will commercial fishermen be prohibited from working fish nets within... periods. (4) No firing will be done during hours of darkness or low visibility. (5) The Commander, Fort...

A piecewise regression approach for determining biologically relevant hydraulic thresholds for the protection of fish at river infrastructure

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boys, Craig A.; Robinson, Wayne; Miller, Brett

2016-05-13

Barotrauma injury can occur when fish are exposed to rapid decompression during downstream passage through river infrastructure. A piecewise regression approach was used to objectively quantify barotrauma injury thresholds in two physoclistous species (Murray cod Maccullochella peelii and silver perch Bidyanus bidyanus) following simulated infrastructure passage in barometric chambers. The probability of injuries such as swim bladder rupture; exophthalmia; and haemorrhage and emphysema in various organs increased as the ratio between the lowest exposure pressure and the acclimation pressure (ratio of pressure change RPCE/A) fell. The relationship was typically non-linear and piecewise regression was able to quantify thresholds in RPCE/Amore » that once exceeded resulted in a substantial increase in barotrauma injury. Thresholds differed among injury types and between species but by applying a multi-species precautionary principle, the maintenance of exposure pressures at river infrastructure above 70% of acclimation pressure (RPCE/A of 0.7) should sufficiently protect downstream migrating juveniles of these two physoclistous species. These findings have important implications for determining the risk posed by current infrastructures and informing the design and operation of new ones.« less

Evaluation of stream flow effects on smolt survival in the Yakima River Basin, Washington, 2012-2014

USGS Publications Warehouse

Courter, Ian; Garrison, Tommy; Kock, Tobias J.; Perry, Russell W.

2015-01-01

The influence of stream flow on survival of emigrating juvenile (smolts) Pacific salmon Oncorhynchus spp. and steelhead trout O. mykiss is of key management interest. However, few studies have quantified flow effects on smolt migration survival, and available information does not indicate a consistent flow-survival relationship within the typical range of flows under management control. It is hypothesized that smolt migration and dam passage survival are positively correlated with stream flow because higher flows increase migration rates, potentially reducing exposure to predation, and reduce delays in reservoirs. However, available empirical data are somewhat equivocal concerning the influence of flow on smolt survival and the underlying mechanisms driving this relationship. Stream flow effects on survival of emigrating anadromous salmonids in the Yakima Basin have concerned water users and fisheries managers for over 20 years, and previous studies do not provide sufficient information at the resolution necessary to inform water operations, which typically occur on a small spatiotemporal scale. Using a series of controlled flow releases from 2012-2014, combined with radio telemetry, we quantified the relationship between flow and smolt survival from Roza Dam 208 km downstream to the Yakima River mouth, as well as for specific routes of passage at Roza Dam. A novel multistate mark-recapture model accounted for weekly variation in flow conditions experienced by radio-tagged fish. Groups of fish were captured and radio-tagged at Roza Dam and released at two locations, upstream at the Big Pines Campground (river kilometer [rkm] 211) and downstream in the Roza Dam tailrace (rkm 208). A total of 904 hatchery-origin yearling Chinook salmon O. tshawytscha were captured in the Roza Dam fish bypass, radio-tagged and released upstream of Roza Dam. Two hundred thirty seven fish were released in the tailrace of Roza Dam. Fish released in the tailrace of Roza Dam were tagged concurrently with fish released upstream of the dam using identical tagging methods. Tagging and release events were conducted to target a range of flow conditions indicative of flows observed during the typical migration period (March-May) for juvenile spring Chinook salmon in the Yakima River. Three, five and four separate upstream releases were conducted in 2012, 2013, and 2014 respectively, and at least 43 fish were released alive on each occasion. The release sample sizes in 2014 were much larger (~130) compared to previous years for the purpose of increasing precision of survival estimates across the range of flows tested. Migration movements of radio-tagged spring Chinook salmon smolts were monitored with an array of telemetry receiver stations (fixed sites) that extended 208 rkm downstream from the forebay of Roza Dam to the mouth of the Yakima River. Fixed monitoring sites included the forebay of Roza Dam (rkm 208), the tailrace of Roza Dam (rkm 207.9), the mouth of Wenas Creek (rkm 199.2), the mouth of the Naches River (two sites, rkm 189.4), Sunnyside Dam (two sites, rkm 169.1), Prosser Dam (rkm 77.2), and the mouth of the Yakima River (two sites, rkm2 3). This array segregated the study area into four discrete reaches in which survival of tagged fish was estimated. Aerial and underwater antennas were also used to monitor tagged fish at Roza Dam. Aerial antennas were located in the forebay, on the East gate, on the West gate, and in the tailrace of Roza Dam. Underwater antennas were located in the fish bypass, upstream of the East gate, and upstream of the West gate to collect route-specific passage data for tagged fish. Additional years of data collection and analysis could alter or improve our understanding of the influence of flow and other environmental factors on smolt survival in the Yakima River. Nevertheless, during 2012-2014, yearling hatchery Chinook salmon smolt emigration survival was significantly associated with stream flow in the

First passage times for multiple particles with reversible target-binding kinetics

NASA Astrophysics Data System (ADS)

Grebenkov, Denis S.

2017-10-01

We investigate the first passage problem for multiple particles that diffuse towards a target, partially adsorb there, and then desorb after a finite exponentially distributed residence time. We search for the first time when m particles undergoing such reversible target-binding kinetics are found simultaneously on the target that may trigger an irreversible chemical reaction or a biophysical event. Even if the particles are independent, the finite residence time on the target yields an intricate temporal coupling between particles. We compute analytically the mean first passage time (MFPT) for two independent particles by mapping the original problem to higher-dimensional surface-mediated diffusion and solving the coupled partial differential equations. The respective effects of the adsorption and desorption rates on the MFPT are revealed and discussed.

Two-dimensional CFD modeling of wave rotor flow dynamics

NASA Technical Reports Server (NTRS)

Welch, Gerard E.; Chima, Rodrick V.

1994-01-01

A two-dimensional Navier-Stokes solver developed for detailed study of wave rotor flow dynamics is described. The CFD model is helping characterize important loss mechanisms within the wave rotor. The wave rotor stationary ports and the moving rotor passages are resolved on multiple computational grid blocks. The finite-volume form of the thin-layer Navier-Stokes equations with laminar viscosity are integrated in time using a four-stage Runge-Kutta scheme. Roe's approximate Riemann solution scheme or the computationally less expensive advection upstream splitting method (AUSM) flux-splitting scheme is used to effect upwind-differencing of the inviscid flux terms, using cell interface primitive variables set by MUSCL-type interpolation. The diffusion terms are central-differenced. The solver is validated using a steady shock/laminar boundary layer interaction problem and an unsteady, inviscid wave rotor passage gradual opening problem. A model inlet port/passage charging problem is simulated and key features of the unsteady wave rotor flow field are identified. Lastly, the medium pressure inlet port and high pressure outlet port portion of the NASA Lewis Research Center experimental divider cycle is simulated and computed results are compared with experimental measurements. The model accurately predicts the wave timing within the rotor passages and the distribution of flow variables in the stationary inlet port region.

Two-dimensional CFD modeling of wave rotor flow dynamics

NASA Technical Reports Server (NTRS)

Welch, Gerard E.; Chima, Rodrick V.

1993-01-01

A two-dimensional Navier-Stokes solver developed for detailed study of wave rotor flow dynamics is described. The CFD model is helping characterize important loss mechanisms within the wave rotor. The wave rotor stationary ports and the moving rotor passages are resolved on multiple computational grid blocks. The finite-volume form of the thin-layer Navier-Stokes equations with laminar viscosity are integrated in time using a four-stage Runge-Kutta scheme. The Roe approximate Riemann solution scheme or the computationally less expensive Advection Upstream Splitting Method (AUSM) flux-splitting scheme are used to effect upwind-differencing of the inviscid flux terms, using cell interface primitive variables set by MUSCL-type interpolation. The diffusion terms are central-differenced. The solver is validated using a steady shock/laminar boundary layer interaction problem and an unsteady, inviscid wave rotor passage gradual opening problem. A model inlet port/passage charging problem is simulated and key features of the unsteady wave rotor flow field are identified. Lastly, the medium pressure inlet port and high pressure outlet port portion of the NASA Lewis Research Center experimental divider cycle is simulated and computed results are compared with experimental measurements. The model accurately predicts the wave timing within the rotor passage and the distribution of flow variables in the stationary inlet port region.

Bowel incontinence

MedlinePlus

Uncontrollable passage of feces; Loss of bowel control; Fecal incontinence; Incontinence - bowel ... older, women tend to have problems with bowel control more often than men. Children who have problems ...

South Fork Salmon River Watershed Restoration, 2008-2009 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reaney, Mark D.

2009-04-15

The watershed restoration work elements within the project area, the South Fork Salmon River Watershed, follow the watershed restoration approach adopted by the Nez Perce Tribe Department of Fisheries Resource Management (DFRM) - Watershed Division. The vision of the Nez Perce Tribe DFRM-Watershed Division focuses on protecting, restoring, and enhancing watersheds and treaty resources within the ceded territory of the Nez Perce Tribe under the Treaty of 1855 with the United States Federal Government. The program uses a holistic approach, which encompasses entire watersheds, ridge top to ridge top, emphasizing all cultural aspects and strategies that rely on natural fishmore » production and healthy river ecosystems. The Nez Perce Tribe DFRM-Watershed Division strives towards maximizing historic ecosystem productivity and health for the restoration of anadromous and resident fish populations and the habitat on which all depend on for future generations Originally, this project was funded to create a step/pool stream channel that was appropriate to restore fish passage where the 'Glory Hole Cascade' is currently located at the Stibnite Mine. Due to unforeseen circumstances at the time, the project is unable to move forward as planned and a request for a change in scope of the project and an expansion of the geographic area in which to complete project work was submitted. No additional funds were being requested. The ultimate goal of this project is to work with the holistic, ridge top to ridge top approach to protect and restore the ecological and biological functions of the South Fork Salmon River Watershed to assist in the recovery of threatened and endangered anadromous and resident fish species. FY 2008 Work Elements included two aquatic organism passage (AOP) projects to restore habitat connectivity to two fish-bearing tributaries to the East Fork South Fork Salmon River, Salt and Profile Creeks. The Work Elements also included road survey and assessment activities that move toward road decommissioning to reduce sediment delivery to spawning gravels and rearing habitats by reducing sedimentation from road related, man-made sources. For FY08, the project included the design and implementation of two fish barrier replacement structures mentioned above, the Salt and Profile Creek Bridges. These work elements were to be implemented on Valley County easements within the Payette National Forest. The existing culverts are full or partial barriers to most aquatic life species and all juvenile anadromous and resident fish species. Implementation will reconnect 9.34 miles of habitat, and provide natural stream channels to facilitate complete passage for all aquatic life forms. All designs were completed and a construction subcontract was awarded to construct free span, pre-cast concrete bridges. For 2008, the project statement of work also included all the necessary work elements to manage, coordinate, plan, and develop continuing strategies for restoration and protection activities.« less

Use of electromyogram telemetry to assess swimming activity of adult spring Chinook salmon migrating past a Columbia River dam

USGS Publications Warehouse

Brown, R.S.; Geist, D.R.; Mesa, M.G.

2006-01-01

Electromyogram (EMG) radiotelemetry was used to estimate the swim speeds of spring Chinook salmon Oncorhynchus tshawytscha migrating upstream past a Columbia River dam. Electrodes from EMG transmitters were surgically implanted in the red muscle of fish captured at Bonneville Dam, and output from the tags was calibrated to defined swim speeds for each fish in a tunnel respirometer. The fish were then released below Bonneville Dam and radio-tracked as they migrated through the tailraces, fishways, and forebays of the dam. On average, swim speed was significantly higher when tagged salmon were moving through tailraces than when they were moving through other parts of the dam. Specifically, swim speeds for fish in tailraces (106.4 cm/s) were 23% higher than those of fish in fishways (84.9 cm/s) and 32% higher than those of fish in forebays (80.2 cm/s). Swim speeds were higher in fishways during the day than during the night, but there were no diel differences in swim speeds in tailraces and forebays. During dam passage, Chinook salmon spent the most time in tailraces, followed by fishways and forebays. ?? Copyright by the American Fisheries Society 2006.

Fish abundance and population stability in a reservoir tailwater and an unregulated headwater stream

USGS Publications Warehouse

Jacobs, K.E.; Swink, W.D.

1983-01-01

Fish abundance and population stability were compared in the tailwater and in an unregulated tributary of Barren River Lake, a flood control reservoir in south central Kentucky. Fish abundance was greater in the tailwater near the dam and was dominated by three species common in the reservoir: gizzard shad (Dorosoma cepedianum), bluegills (Lepomis macrochirus), and white crappies (Pomoxis annularis). Three riverine suckers were less abundant in the tailwater than in the unregulated stream: northern hog suckers (Hypentelium nigricans), black redhorse (Moxostoma duquesnei), and golden redhorse (Moxostoma erythrurum). The fish populations in the tailwater, particularly common carp (Cyprinus carpio), northern hog suckers, black redhorse, and golden redhorse, were less stable than those in the unregulated stream. Population stability is defined as the extent to which fish remain in a stream section. This study suggests that the occurrence of reservoir species in the tailwater was the result of fish passage from the reservoir during high discharges in fall and winter. Reservoir operations (altered flow, low summer water temperature, and poor summer water quality) probably were responsible for the unstable populations of common carp and riverine suckers in the tailwater.

Population Viability Analysis of Riverine Fishes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bates, P.; Chandler, J.; Jager, H.I.

Many utilities face conflkts between two goals: cost-efficient hydropower generation and protecting riverine fishes. Research to develop ecological simulation tools that can evaluate alternative mitigation strategies in terms of their benefits to fish populations is vital to informed decision-making. In this paper, we describe our approach to population viability analysis of riverine fishes in general and Snake River white sturgeon in particular. We are finding that the individual-based modeling approach used in previous in-stream flow applications is well suited to addressing questions about the viability of species of concern for several reasons. Chief among these are: (1) the abiIity tomore » represent the effects of individual variation in life history characteristics on predicted population viabili~, (2) the flexibili~ needed to quanti~ the ecological benefits of alternative flow management options by representing spatial and temporal variation in flow and temperaturty and (3) the flexibility needed to quantifi the ecological benefits of non-flow related manipulations (i.e., passage, screening and hatchery supplementation).« less

Analysis of environmental issues related to small-scale hydroelectric development IV: fish mortality resulting from turbine passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Turbak, S. C.; Reichle, D. R.; Shriner, C. R.

1981-01-01

This document presents a state-of-the-art review of literature concerning turbine-related fish mortality. The review discusses conventional and, to a lesser degree, pumped-storage (reversible) hydroelectric facilities. Much of the research on conventional facilities discussed in this report deals with studies performed in the Pacific Northwest and covers both prototype and model studies. Research conducted on Kaplan and Francis turbines during the 1950s and 1960s has been extensively reviewed and is discussed. Very little work on turbine-related fish mortality has been undertaken with newer turbine designs developed for more modern small-scale hydropower facilities; however, one study on a bulb unit (Kaplan runner)more » has recently been released. In discussing turbine-related fish mortality at pumped-storage facilities, much of the literature relates to the Ludington Pumped Storage Power Plant. As such, it is used as the principal facility in discussing research concerning pumped storage.« less

Pros and cons of fish skin cells in culture: long-term full skin and short-term scale cell culture from rainbow trout, Oncorhynchus mykiss.

PubMed

Rakers, Sebastian; Klinger, Matthias; Kruse, Charli; Gebert, Marina

2011-12-01

Here, we report the establishment of a permanent skin cell culture from rainbow trout (Oncorhynchus mykiss). The cells of the fish skin cell culture could be propagated over 60 passages so far. Furthermore, we show for the first time that it is possible to integrate freshly harvested rainbow trout scales into this new fish skin cell culture. We further demonstrated that epithelial cells derived from the scales survived in the artificial micro-environment of surrounding fibroblast-like cells. Also, antibody staining indicated that both cell types proliferated and started to build connections with the other cell type. It seems that it is possible to generate an 'artificial skin' with two different cell types. This could lead to the development of a three-dimensional test system, which might be a better in vitro representative of fish skin in vivo than individual skin cell lines. Copyright © 2011 Elsevier GmbH. All rights reserved.

Evaluation of the 2008 Predictions of Run-Timing and Survival of Wild Migrant Yearling Chinook and Steelhead on the Columbia and Snake Rivers.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beer, W. Nicholas; Iltis, Susannah; Anderson, James J.

2009-01-01

Columbia Basin Research uses the COMPASS model on a daily basis during the outmigration of Snake River Chinook and steelhead smolts to predict downstream passage and survival. Fish arrival predictions and observations from program RealTime along with predicted and observed environmental conditions are used to make in-season predictions of arrival and survival to various dams in the Columbia and Snake Rivers. For 2008, calibrations of travel and survival parameters for two stocks of fish-Snake River yearling PIT-tagged wild chinook salmon (chin1pit) and Snake River PIT-tagged steelhead (lgrStlhd)-were used to model travel and survival of steelhead and chinook stocks from Lowermore » Granite Dam (LWG) or McNary Dam (MCN) to Bonneville Dam (BON). This report summarizes the success of the COMPASS/RealTime process to model these migrations as they occur. We compared model results on timing and survival to data from two sources: stock specific counts at dams and end-of-season control survival estimates (Jim Faulkner, NOAA, pers. comm. Dec. 16, 2008). The difference between the predicted and observed day of median passage and the Mean Absolute Deviation (MAD) between predicted and observed arrival cumulative distributions are measures of timing accuracy. MAD is essentially the average percentage error over the season. The difference between the predicted and observed survivals is a measure of survival accuracy. Model results and timing data were in good agreement from LWG to John Day Dam (JDA). Predictions of median passage days for the chin1pit and lgrStlhd stocks were 0 and 2 days (respectively) later than observed. MAD for chin1pit and lgrStlhd stocks at JDA were 2.3% and 5.9% (respectively). Between JDA and BON modeling and timing data were not as well matched. At BON, median passage predictions were 6 and 10 days later than observed and MAD values were 7.8% and 16.0% respectively. Model results and survival data were in good agreement from LWG to MCN. COMPASS predicted survivals of 0.77 and 0.69 for chin1pit and lgrStlhd, while the data control's survivals were 0.79 and 0.68. The differences are 0.02 and 0.01 (respectively), nearly identical. However, from MCN to BON, COMPASS predicted survivals of 0.74 and 0.69 while the data controls survivals were 0.47 and 0.53 respectively. Differences of 0.27 and 0.16. In summary: Travel and survival of chin1pit and lgrStlhd stocks were well modeled in the upper reaches. Fish in the lower reaches down through BON suffered unmodeled mortality, and/or passed BON undetected. A drop in bypass fraction and unmodeled mortality during the run could produce such patterns by shifting the observed median passage day to appear artificially early.« less

Assessment of smolt condition for travel time analysis. Annual report 1989

USGS Publications Warehouse

Beeman, J.W.; Rondorf, D.W.; Faler, J.C.; Free, M.E.; Haner, P.V.

1990-01-01

The Water Budget is a volume of water used to enhance environmental conditions (flows) in the Columbia and Snake rivers for juvenile salmonids during their seaward migration. To manage the Water Budget, the Fish Passage Center estimates travel times of juvenile salmonids in index reaches of the main-stem rivers, using information on river flows and the migrational characteristics of the juvenile salmonids. This study was initiated to provide physiological information on the juvenile salmonids used for these travel time estimates. The physiological ability to respond to stressors was evaluated by measuring concentrations of plasma cortisol, glucose, and chlorides before and after a 30-s handling-stress challenge test. As in 1988, most groups responded satisfactorily to the challenge. The scope for response was compromised among two groups of juvenile chinook salmon that were trucked to release sites and in steelhead from one hatchery after unusual marking and transportation protocols were used. The development of smoltification was assessed by measuring gill Na+-K+ ATPase activity and plasma thyroxine concentrations. Mean ATPase activities of marked hatchery groups of juvenile chinook salmon and steelhead changed little during the month before release and rose sharply for about the first 20 d of the migration after release. Mean plasma thyroxine was highest during the first 20 d after release. Mean gill ATPase activity of spring chinook salmon from the migration-at-large peaked at about the 90th percentile of passage at Rock Island and Lower Granite dams, and at about the 50th percentile of passage at McNary Dam. Mean gill ATPase activity of wild steelhead was higher than gill ATPase activity of hatchery steelhead at Rock Island Dam, the Snake River Trap, and Lower Granite Dam, but not at McNary Dam. This was attributed to a time-dependent relationship between increases in ATPase activity and the number of days fish migrated before recapture. Correlations of gill ATPase activity and/or plasma thyroxine concentrations with condition factor, morphology, or skin guanine concentration may be useful as non-lethal indicators of smoltification for inclusion in a smoltification index. Prevalence of bacterial kidney disease in spring chinook salmon was generally higher than in 1988, ranging from 81-100% using an enzyme-linked immunosorbent assay (ELISA) method. Fish from Snake River hatcheries had more severe infections than those from mid-Columbia hatcheries. The percentage of fish with severe infections was lower at two downstream dams than at the Snake River hatcheries of origin, suggesting a bias in dam collection facilities or that these fish ceased to migrate, either of which could lead to biases in travel time estimates.

Aquaculture as yet another environmental gateway to the development and globalisation of antimicrobial resistance.

PubMed

Cabello, Felipe C; Godfrey, Henry P; Buschmann, Alejandro H; Dölz, Humberto J

2016-07-01

Aquaculture uses hundreds of tonnes of antimicrobials annually to prevent and treat bacterial infection. The passage of these antimicrobials into the aquatic environment selects for resistant bacteria and resistance genes and stimulates bacterial mutation, recombination, and horizontal gene transfer. The potential bridging of aquatic and human pathogen resistomes leads to emergence of new antimicrobial-resistant bacteria and global dissemination of them and their antimicrobial resistance genes into animal and human populations. Efforts to prevent antimicrobial overuse in aquaculture must include education of all stakeholders about its detrimental effects on the health of fish, human beings, and the aquatic ecosystem (the notion of One Health), and encouragement of environmentally friendly measures of disease prevention, including vaccines, probiotics, and bacteriophages. Adoption of these measures is a crucial supplement to efforts dealing with antimicrobial resistance by developing new therapeutic agents, if headway is to be made against the increasing problem of antimicrobial resistance in human and veterinary medicine. Copyright © 2016 Elsevier Ltd. All rights reserved.

Evaluation of Dual Frequency Identification Sonar (DIDSON) for Monitoring Pacific Lamprey Passage Behavior at Fishways of Bonneville Dam, 2011

DTIC Science & Technology

2012-01-01

Mundy’s Welding and the University of Idaho machine shop who went out of their way to manufacture and modify our sampling gear. We also thank R. Poulin, C...Columbia River: 2008 radiotelemetry and half- duplex PIT tag studies. Technical Report 2009-8 of Idaho Cooperative Fish and Wildlife Research Unit to U.S

78 FR 13660 - Trafalgar Power Inc.; Notice of Teleconference To Discuss Agency Requests To Reopen License To...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-02-28

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Project No. 9821-102] Trafalgar Power Inc.; Notice of Teleconference To Discuss Agency Requests To Reopen License To Require Fish Passage and Protection Measures a. Date and Time of teleconference: March 12, 2013 at 10:00 a.m. Eastern Time. b. FERC Contact: B. Peter Yarrington (202) 502...

A GIS tool to analyze forest road sediment production and stream impacts

Treesearch

Ajay Prasad; David G. Tarboton; Charles H. Luce; Thomas A. Black

2005-01-01

A set of GIS tools to analyze the impacts of forest roads on streams considering sediment production, mass wasting risk, and fish passage barriers, has been developed. Sediment production for each road segment is calculated from slope, length, road surface condition and road-side drain vegetation gathered by a GPS inventory and by overlaying the road path on a Digital...

Confederated Tribes Umatilla Indian Reservation (CTUIR) Umatilla Anadromous Fisheries Habitat Project : A Columbia River Basin Fish Habitat Project : Annual Report Fiscal Year 2007.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hoverson, Eric D.; Amonette, Alexandra

2008-12-02

The Umatilla Anadromous Fisheries Habitat Project (UAFHP) is an ongoing effort to protect, enhance, and restore riparian and instream habitat for the natural production of anadromous salmonids in the Umatilla River Basin, Northeast Oregon. Flow quantity, water temperature, passage, and lack of in-stream channel complexity have been identified as the key limiting factors in the basin. During the 2007 Fiscal Year (FY) reporting period (February 1, 2007-January 31, 2008) primary project activities focused on improving instream and riparian habitat complexity, migrational passage, and restoring natural channel morphology and floodplain function. Eight fisheries habitat enhancement projects were implemented on Meacham Creek,more » Camp Creek, Greasewood Creek, Birch Creek, West Birch Creek, and the Umatilla River. Specific restoration actions included: (1) rectifying five fish passage barriers on four creeks, (2) planting 1,275 saplings and seeding 130 pounds of native grasses, (3) constructing two miles of riparian fencing for livestock exclusion, (4) coordinating activities related to the installation of two off-channel, solar-powered watering areas for livestock, and (5) developing eight water gap access sites to reduce impacts from livestock. Baseline and ongoing monitoring and evaluation activities were also completed on major project areas such as conducting photo point monitoring strategies activities at the Meacham Creek Large Wood Implementation Project site (FY2006) and at all existing easements and planned project sites. Fish surveys and aquatic habitat inventories were conducted at project sites prior to implementation. Monitoring plans will continue throughout the life of each project to oversee progression and inspire timely managerial actions. Twenty-seven conservation easements were maintained with 23 landowners. Permitting applications for planned project activities and biological opinions were written and approved. Project activities were based on a variety of fisheries monitoring techniques and habitat assessments used to determine existing conditions and identify factors limiting anadromous salmonid abundance. Proper selection and implementation of the most effective site-specific habitat restoration plan, taking into consideration the unique characteristics of each project site, and conducted in cooperation with landowners and project partners, was of paramount importance to ensure each project's success.« less

Asymptotic analysis of the narrow escape problem in dendritic spine shaped domain: three dimensions

NASA Astrophysics Data System (ADS)

Li, Xiaofei; Lee, Hyundae; Wang, Yuliang

2017-08-01

This paper deals with the three-dimensional narrow escape problem in a dendritic spine shaped domain, which is composed of a relatively big head and a thin neck. The narrow escape problem is to compute the mean first passage time of Brownian particles traveling from inside the head to the end of the neck. The original model is to solve a mixed Dirichlet-Neumann boundary value problem for the Poisson equation in the composite domain, and is computationally challenging. In this paper we seek to transfer the original problem to a mixed Robin-Neumann boundary value problem by dropping the thin neck part, and rigorously derive the asymptotic expansion of the mean first passage time with high order terms. This study is a nontrivial three-dimensional generalization of the work in Li (2014 J. Phys. A: Math. Theor. 47 505202), where a two-dimensional analogue domain is considered.

Performance Assessment of Bi-Directional Knotless Tissue-Closure Device in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters, 2010 - Final Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Woodley, Christa M.; Bryson, Amanda J.; Carpenter, Scott M.

2012-09-10

In 2010, researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) conducted a compliance monitoring study—the Lower Columbia River Acoustic Transmitter Investigations of Dam Passage Survival and Associated Metrics 2010 (Carlson et al. in preparation)—for the U.S. Army Corps of Engineers (USACE), Portland District. The purpose of the compliance study was to evaluate juvenile Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) passage routes and survival through the lower three Columbia River hydroelectric facilities as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp; NOAA Fisheries 2008) and the Columbia Basin Fishmore » Accords (Fish Accords; 3 Treaty Tribes and Action Agencies 2008).« less

Migratory Behavior and Survival of Juvenile Salmonids in the Lower Columbia River, Estuary, and Plume in 2010

DOE Office of Scientific and Technical Information (OSTI.GOV)

McMichael, Geoffrey A.; Harnish, Ryan A.; Skalski, John R.

Uncertainty regarding the migratory behavior and survival of juvenile salmonids passing through the lower Columbia River and estuary after negotiating dams on the Federal Columbia River Power System (FCRPS) prompted the development and application of the Juvenile Salmon Acoustic Telemetry System (JSATS). The JSATS has been used to investigate the survival of juvenile salmonid smolts between Bonneville Dam (river kilometer (rkm) 236) and the mouth of the Columbia River annually since 2004. In 2010, a total of 12,214 juvenile salmonids were implanted with both a passive integrated transponder (PIT) and a JSATS acoustic transmitter. Using detection information from JSATS receivermore » arrays deployed on dams and in the river, estuary, and plume, the survival probability of yearling Chinook salmon and steelhead smolts tagged at John Day Dam was estimated form multiple reaches between rkm 153 and 8.3 during the spring. During summer, the survival probability of subyearling Chinook salmon was estimated for the same reaches. In addition, the influence of routes of passage (e.g., surface spill, deep spill, turbine, juvenile bypass system) through the lower three dams on the Columbia River (John Day, The Dalles, and Bonneville) on juvenile salmonid smolt survival probability from the dams to rkm 153 and then between rkm 153 and 8.3 was examined to increase understanding of the immediate and latent effects of dam passage on juvenile salmon survival. Similar to previous findings, survival probability was relatively high (>0.95) for most groups of juvenile salmonids from the Bonneville Dam tailrace to about rkm 50. Downstream of rkm 50 the survival probability of all species and run types we examined decreased markedly. Steelhead smolts suffered the highest mortality in this lower portion of the Columbia River estuary, with only an estimated 60% of the tagged fish surviving to the mouth of the river. In contrast, yearling and subyearling Chinook salmon smolts survived to the mouth of the river at higher rates, with estimated survival probabilities of 84% and 86%, respectively. The influence of route of passage at the lower three dams in the FCRPS on juvenile salmonid survival appeared to be relatively direct and immediate. Significant differences in estimated survival probabilities of juvenile salmonid smolts among groups with different dam passage experiences were often detected between the dams and rkm 153. In contrast, the influence of route of passage on survival to the mouth of the Columbia River was not apparent among the groups of tagged juvenile salmonids with different FCRPS passage experiences after they had already survived to a point about 80 km downstream of Bonneville Dam. Yearling Chinook salmon and steelhead smolts that migrated through the lower estuary in off-channel habitats took two to three times longer to travel through these lower reaches and their estimated survival probabilities were not significantly different from that of their cohorts which migrated in or near the navigation channel. A large proportion of the tagged juvenile salmonids migrating in or near the navigation channel in the lower estuary crossed from the south side of the estuary near Astoria, Oregon and passed through relatively shallow expansive sand flats (Taylor Sands) to the North Channel along the Washington shore of the estuary. This migratory behavior may contribute to the avian predation losses observed on for fish (2 to 12% of fish in this study).« less

Injury and mortality of juvenile salmon entrained in a submerged jet entering still water

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Mueller, Robert P.; Richmond, Marshall C.

Juvenile salmon can be injured and killed when they pass through hydroelectric turbines and other downstream passage alternatives. The hydraulic conditions in these complex environments that pose a risk to the health of fish include turbulent shear flows, collisions with hydraulic structures, cavitation, and rapid change of pressure. Improvements in the understating of the biological responses of juvenile salmon in turbulent shear flows can reduce salmon injury and mortality. In a series of studies, juvenile fall Chinook salmon (Oncorhynchus tshawythscha) were exposed to turbulent shear flows in two mechanisms: 1) the slow-fish-to-fast-water mechanism, where test fish were introduced into amore » turbulent jet from slow-moving water through an introduction tube placed just outside the edge of the jet; 2) the fast-fish-to-slow-water mechanism, where test fish were carried by the fast-moving water of a submerged turbulent jet into the slow-moving water of a flume. All fish exposures to the water jet were recorded by two high-speed, high-resolution cameras. Motion-tracking analysis was then performed on the digital videos to quantify associated kinematic and dynamic parameters. The main results for the slow-fish-to-fast-water mechanism were described in Deng et al (2005). This chapter will discuss the test results of the fast-fish-to-slow-water mechanism and compare the results of the two mechanisms.« less

Migratory behavior of adult sea lamprey and cumulative passage performance through four fishways

USGS Publications Warehouse

Castro-Santos, Theodore R.; Shi, Xiaotao; Haro, Alexander

2017-01-01

This article describes a study of PIT-tagged sea lamprey (Petromyzon marinus) ascending four fishways comprising three designs at two dams on the Connecticut River, USA. Migration between dams was rapid (median migration rate = 23 km·day−1). Movement through the fishways was much slower, however (median = 0.02–0.33 km·day−1). Overall delay at dams was substantial (median = 13.6–14.6 days); many fish failed to pass (percent passage ranged from 29% to 55%, depending on fishway), and repeated passage attempts compounded delay for both passers and failers. Cox regression revealed that fishway entry rates were influenced by flow, temperature, and diel cycle, with most lampreys entering at night and at elevated flows, but with no apparent effect of sex or length. Overall delay was influenced by slow movement through the fishways, but repeated failures were the primary factor determining delay. These data suggest that although some lamprey were able to pass fishways, they did so with difficulty, and delays incurred as they attempted to pass may act to limit their distribution within their native range.

Connection between optimal control theory and adiabatic-passage techniques in quantum systems

NASA Astrophysics Data System (ADS)

Assémat, E.; Sugny, D.

2012-08-01

This work explores the relationship between optimal control theory and adiabatic passage techniques in quantum systems. The study is based on a geometric analysis of the Hamiltonian dynamics constructed from Pontryagin's maximum principle. In a three-level quantum system, we show that the stimulated Raman adiabatic passage technique can be associated to a peculiar Hamiltonian singularity. One deduces that the adiabatic pulse is solution of the optimal control problem only for a specific cost functional. This analysis is extended to the case of a four-level quantum system.

Factors affecting stranding of juvenile salmonids by wakes from ship passage in the Lower Columbia River

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pearson, Walter H.; Skalski, John R.

2011-09-01

The effects of deep-draft vessel traffic in confined riverine channels on shorelines and fish are of widespread concern. In the Pacific Northwest of the United States, wakes and subsequent beach run-up from ships transiting the Lower Columbia River have been observed to strand juvenile salmon and other fish. As part of a before-and-after study to assess stranding effects that may be associated with channel deepening, we measured 19 co-variables from observations of 126 vessel passages at three low-slope beaches and used multiple logistic regression to discern the significant factors influencing the frequency of stranding. Subyearling Chinook salmon were 82% ofmore » the fish stranded over all sites and seasons. Given a low-slope beach, stranding frequencies for juvenile salmon were significantly related to river location, salmon density in the shallows, a proxy for ship kinetic energy, tidal height, and two interactions. The beach types selected for our study do not include all the beach types along the Lower Columbia River so that the stranding probabilities described here cannot be extrapolated river-wide. A more sophisticated modeling effort, informed by additional field data, is needed to assess salmon losses by stranding for the entire lower river. Such modeling needs to include river-scale factors such as beach type, berms, proximity to navigation channel, and perhaps, proximity to tributaries that act as sources of out-migrating juvenile salmon. At both river and beach scales, no one factor produces stranding; rather interactions among several conditions produce a stranding event and give stranding its episodic nature.« less

Robust measurement of telomere length in single cells

PubMed Central

Wang, Fang; Pan, Xinghua; Kalmbach, Keri; Seth-Smith, Michelle L.; Ye, Xiaoying; Antumes, Danielle M. F.; Yin, Yu; Liu, Lin; Keefe, David L.; Weissman, Sherman M.

2013-01-01

Measurement of telomere length currently requires a large population of cells, which masks telomere length heterogeneity in single cells, or requires FISH in metaphase arrested cells, posing technical challenges. A practical method for measuring telomere length in single cells has been lacking. We established a simple and robust approach for single-cell telomere length measurement (SCT-pqPCR). We first optimized a multiplex preamplification specific for telomeres and reference genes from individual cells, such that the amplicon provides a consistent ratio (T/R) of telomeres (T) to the reference genes (R) by quantitative PCR (qPCR). The average T/R ratio of multiple single cells corresponded closely to that of a given cell population measured by regular qPCR, and correlated with those of telomere restriction fragments (TRF) and quantitative FISH measurements. Furthermore, SCT-pqPCR detected the telomere length for quiescent cells that are inaccessible by quantitative FISH. The reliability of SCT-pqPCR also was confirmed using sister cells from two cell embryos. Telomere length heterogeneity was identified by SCT-pqPCR among cells of various human and mouse cell types. We found that the T/R values of human fibroblasts at later passages and from old donors were lower and more heterogeneous than those of early passages and from young donors, that cancer cell lines show heterogeneous telomere lengths, that human oocytes and polar bodies have nearly identical telomere lengths, and that the telomere lengths progressively increase from the zygote, two-cell to four-cell embryo. This method will facilitate understanding of telomere heterogeneity and its role in tumorigenesis, aging, and associated diseases. PMID:23661059

A 3D approximate maximum likelihood solver for localization of fish implanted with acoustic transmitters

DOE PAGES

Li, Xinya; Deng, Z. Daniel; USA, Richland Washington; ...

2014-11-27

Better understanding of fish behavior is vital for recovery of many endangered species including salmon. The Juvenile Salmon Acoustic Telemetry System (JSATS) was developed to observe the out-migratory behavior of juvenile salmonids tagged by surgical implantation of acoustic micro-transmitters and to estimate the survival when passing through dams on the Snake and Columbia Rivers. A robust three-dimensional solver was needed to accurately and efficiently estimate the time sequence of locations of fish tagged with JSATS acoustic transmitters, to describe in sufficient detail the information needed to assess the function of dam-passage design alternatives. An approximate maximum likelihood solver was developedmore » using measurements of time difference of arrival from all hydrophones in receiving arrays on which a transmission was detected. Field experiments demonstrated that the developed solver performed significantly better in tracking efficiency and accuracy than other solvers described in the literature.« less

A 3D approximate maximum likelihood solver for localization of fish implanted with acoustic transmitters

NASA Astrophysics Data System (ADS)

Li, Xinya; Deng, Z. Daniel; Sun, Yannan; Martinez, Jayson J.; Fu, Tao; McMichael, Geoffrey A.; Carlson, Thomas J.

2014-11-01

Better understanding of fish behavior is vital for recovery of many endangered species including salmon. The Juvenile Salmon Acoustic Telemetry System (JSATS) was developed to observe the out-migratory behavior of juvenile salmonids tagged by surgical implantation of acoustic micro-transmitters and to estimate the survival when passing through dams on the Snake and Columbia Rivers. A robust three-dimensional solver was needed to accurately and efficiently estimate the time sequence of locations of fish tagged with JSATS acoustic transmitters, to describe in sufficient detail the information needed to assess the function of dam-passage design alternatives. An approximate maximum likelihood solver was developed using measurements of time difference of arrival from all hydrophones in receiving arrays on which a transmission was detected. Field experiments demonstrated that the developed solver performed significantly better in tracking efficiency and accuracy than other solvers described in the literature.

A 3D approximate maximum likelihood solver for localization of fish implanted with acoustic transmitters

PubMed Central

Li, Xinya; Deng, Z. Daniel; Sun, Yannan; Martinez, Jayson J.; Fu, Tao; McMichael, Geoffrey A.; Carlson, Thomas J.

2014-01-01

Better understanding of fish behavior is vital for recovery of many endangered species including salmon. The Juvenile Salmon Acoustic Telemetry System (JSATS) was developed to observe the out-migratory behavior of juvenile salmonids tagged by surgical implantation of acoustic micro-transmitters and to estimate the survival when passing through dams on the Snake and Columbia Rivers. A robust three-dimensional solver was needed to accurately and efficiently estimate the time sequence of locations of fish tagged with JSATS acoustic transmitters, to describe in sufficient detail the information needed to assess the function of dam-passage design alternatives. An approximate maximum likelihood solver was developed using measurements of time difference of arrival from all hydrophones in receiving arrays on which a transmission was detected. Field experiments demonstrated that the developed solver performed significantly better in tracking efficiency and accuracy than other solvers described in the literature. PMID:25427517

A 3D approximate maximum likelihood solver for localization of fish implanted with acoustic transmitters.

PubMed

Li, Xinya; Deng, Z Daniel; Sun, Yannan; Martinez, Jayson J; Fu, Tao; McMichael, Geoffrey A; Carlson, Thomas J

2014-11-27

Better understanding of fish behavior is vital for recovery of many endangered species including salmon. The Juvenile Salmon Acoustic Telemetry System (JSATS) was developed to observe the out-migratory behavior of juvenile salmonids tagged by surgical implantation of acoustic micro-transmitters and to estimate the survival when passing through dams on the Snake and Columbia Rivers. A robust three-dimensional solver was needed to accurately and efficiently estimate the time sequence of locations of fish tagged with JSATS acoustic transmitters, to describe in sufficient detail the information needed to assess the function of dam-passage design alternatives. An approximate maximum likelihood solver was developed using measurements of time difference of arrival from all hydrophones in receiving arrays on which a transmission was detected. Field experiments demonstrated that the developed solver performed significantly better in tracking efficiency and accuracy than other solvers described in the literature.

Comparison of damage to live v. euthanized Atlantic salmon Salmo salar smolts from passage through an Archimedean screw turbine.

PubMed

Brackley, R; Lucas, M C; Thomas, R; Adams, C E; Bean, C W

2018-05-01

This study assessed the usefulness of passing euthanized Atlantic salmon Salmo salar smolts through an Archimedean screw turbine to test for external damage, as compared with live, actively swimming smolts. Scale loss was the only observed effect. Severe scale loss was 5·9 times more prevalent in euthanized turbine-passed fish (45%) than the live fish (7·6%). Additionally, distinctive patterns of scale loss, consistent with grinding between the turbine helices and housing trough, were observed in 35% of euthanized turbine-passed smolts. This distinctive pattern of scale loss was not seen in live turbine-passed smolts, nor in control groups (live and euthanized smolts released downstream of the turbine), which suggests that the altered behaviour of dead fish in turbine flows generates biased injury outcomes. © 2018 The Fisheries Society of the British Isles.

A 3D approximate maximum likelihood solver for localization of fish implanted with acoustic transmitters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Xinya; Deng, Z. Daniel; USA, Richland Washington

Better understanding of fish behavior is vital for recovery of many endangered species including salmon. The Juvenile Salmon Acoustic Telemetry System (JSATS) was developed to observe the out-migratory behavior of juvenile salmonids tagged by surgical implantation of acoustic micro-transmitters and to estimate the survival when passing through dams on the Snake and Columbia Rivers. A robust three-dimensional solver was needed to accurately and efficiently estimate the time sequence of locations of fish tagged with JSATS acoustic transmitters, to describe in sufficient detail the information needed to assess the function of dam-passage design alternatives. An approximate maximum likelihood solver was developedmore » using measurements of time difference of arrival from all hydrophones in receiving arrays on which a transmission was detected. Field experiments demonstrated that the developed solver performed significantly better in tracking efficiency and accuracy than other solvers described in the literature.« less

Distribution and relative abundance of fishes in littoral areas of Chief Joseph Reservoir, Columbia River

USGS Publications Warehouse

Gadomski, Dena M.; Venditti, David A.; Robinson, T. Craig; Beeman, John W.; Maule, Alec G.

2004-01-01

We surveyed fish assemblages in littoral areas of Chief Joseph Reservoir of the upper Columbia River to aid in understanding this ecosystem. Fish distributions and abundances were examined during April-July 1999 in relation to environmental conditions in the reservoir. We also compared the fish assemblages in Chief Joseph reservoir in 1999 to a past study conducted during 1974-1975, and to assemblages in other areas of the Columbia River. During 67 hr of electrofishing and 78 beach seine hauls in Chief Joseph Reservoir, 7460 fishes representing 8 families were collected. The majority of the catch was native – northern pikeminnow; redside shiners; longnose, bridgelip, and largescale suckers; and sculpins. The most abundant introduced species was walleye, and one species, rainbow trout, was mostly of net-pen origin. Larger sizes of suckers and northern pikeminnow were most abundant in the upper reservoir, likely due to upstream spawning migrations. The lower reservoir contained greater abundances of smaller fishes, and this area had lower flows, smaller substrates, and more complex shorelines that offered these fishes refugia. Only adult suckers displayed significant differences in abundances related to substrate. The relative abundances of species appeared to have changed since the 1970s, when the dominant fishes were northern pikeminnow, peamouth, largescale suckers, and walleye. Fish assemblage differences between Chief Joseph Reservoir and lower Columbia River reservoirs were also evident due to the morphology of the reservoir, its more northerly location, and the lack of fish passage facilities at Chief Joseph Dam. Our study is one of the few descriptions of fishes in the upper Columbia Rivers.

Passage and behaviour of cultured Lake Sturgeon in a prototype side-baffle fish ladder: I. Ladder hydraulics and fish ascent

USGS Publications Warehouse

Kynard, B.; Pugh, D.; Parker, T.

2011-01-01

Research and development of a fish ladder for sturgeons requires understanding ladder hydraulics and sturgeon behaviour in the ladder to insure the ladder is safe and provides effective passage. After years of research and development, we designed and constructed a full-scale prototype side-baffle ladder inside a spiral flume (38.3m long??1m wide??1m high) on a 6% (1:16.5) slope with a 1.92-m rise in elevation (bottom to top) to test use by sturgeons. Twenty-eight triangular side baffles, each extending part way across the flume, alternated from inside wall to outside wall down the ladder creating two major flow habitats: a continuous, sinusoidal flow down the ladder through the vertical openings of side-baffles and an eddy below each side baffle. Ascent and behaviour was observed on 22 cultured Lake Sturgeon=LS (Acipenser fulvescens) repeatedly tested in groups as juveniles (as small as 105.1cm TL, mean) or as adults (mean TL, 118cm) during four periods (fall 2002 and 2003; spring 2003 and 2007). Percent of juveniles entering the ladder that ascended to the top was greater in spring (72.7%) than in fall (40.9-45.5%) and 90.9% of 11 adults, which ascended as juveniles, ascended to the top. Six LS (27.3%) never swam to the top and seven (31.8%) swam to the top in all tests, indicating great variability among individuals for ascent drive. Some LS swam directly to the top in <1min, but most rested in an eddy during ascent. Juveniles swimming through outside wall baffle slots (mean velocity, 1.2ms-1) swam at 1.8-2.2body lengthss-1 and 3.2-3.3tail beatss-1, either at or approaching prolonged swimming speed. The side-baffle ladder was stream-like and provided key factors for a sturgeon ladder: a continuous flow and no full cross-channel walls, abundant eddies for resting, an acceptable water depth, and a water velocity fish could ascend swimming 2bls-1. A side-baffle ladder passes LS and other moderate-swimming fishes. ?? 2011 Blackwell Verlag, Berlin.

Changes in the Arctic: Background and Issues for Congress

DTIC Science & Technology

2016-12-07

permafrost to melt could pose challenges to onshore exploration activities. Increased oil and gas exploration and tourism (cruise ships) in the Arctic...the Northwest Passage and the Northern Sea Route, extraction of potential oil and gas resources, and expanded fishing and tourism (Figure 3...not occurred in the Arctic region, 133 recent economic activity, such as oil and gas exploration and tourism (cruise ships), increases the risk of oil

First-passage and escape problems in the Feller process

NASA Astrophysics Data System (ADS)

Masoliver, Jaume; Perelló, Josep

2012-10-01

The Feller process is an one-dimensional diffusion process with linear drift and state-dependent diffusion coefficient vanishing at the origin. The process is positive definite and it is this property along with its linear character that have made Feller process a convenient candidate for the modeling of a number of phenomena ranging from single-neuron firing to volatility of financial assets. While general properties of the process have long been well known, less known are properties related to level crossing such as the first-passage and the escape problems. In this work we thoroughly address these questions.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tiffan, Kenneth F.; Rondorf, Dennis W.

This report summarizes results of research activities conducted in 1999 and years previous. In an effort to provide this information to a wider audience, the individual chapters in this report have been submitted as manuscripts to peer-reviewed journals. These chapters communicate significant findings that will aid in the management and recovery of fall chinook salmon in the Columbia River Basin. Abundance and timing of seaward migration of Snake River fall chinook salmon was indexed using passage data collected at Lower Granite Dam for five years. We used genetic analyses to determine the lineage of fish recaptured at Lower Granite Dammore » that had been previously PIT tagged. We then used discriminant analysis to determine run membership of PIT-tagged smolts that were not recaptured to enable us to calculate annual run composition and to compared early life history attributes of wild subyearling fall and spring chinook salmon. Because spring chinook salmon made up from 15.1 to 44.4% of the tagged subyearling smolts that were detected passing Lower Granite Dam, subyearling passage data at Lower Granite Dam can only be used to index fall chinook salmon smolt abundance and passage timing if genetic samples are taken to identify run membership of smolts. Otherwise, fall chinook salmon smolt abundance would be overestimated and timing of fall chinook salmon smolt passage would appear to be earlier and more protracted than is the case.« less

Effects of Cryptocaryon irritans infection on the survival, feeding, respiratory rate and ionic regulation of the marbled rockfish Sebastiscus marmoratus.

PubMed

Yin, Fei; Gong, Qiyang; Li, Yanwei; Dan, Xueming; Sun, Peng; Gao, Quanxin; Shi, Zhaohong; Peng, Shiming; Li, Anxing

2014-02-01

To clarify the effects of a Cryptocaryon irritans infection on the physiological functions of the marbled rockfish Sebastiscus marmoratus, this study utilized C. irritans at concentrations of 2500; 5000; 7500; 10,000; 20,000; and 30,000 theronts/fish to infect marbled rockfish weighing 45 ± 3 g. The survival rate, food intake, respiratory rate, serum ion concentrations and gill Na+/K+-ATPase activity were determined. With the increase of the infection concentration and the passage of time, the survival rate of the rockfish gradually decreased. The groups infected with more than 5000 theronts/fish had stopped feeding within 4 days. The respiratory rates of the fish in the groups infected with 2500 and 5000 theronts/fish initially increased and then decreased. In contrast, the respiratory rate of the fish in the groups infected with more than 7500 theronts/fish was elevated to levels significantly higher than the control group after 12 h. The Na+/K+-ATPase activity and serum Na+ and Cl- concentrations increased with increasing infection concentration. In conclusion, the physiological functions of the fish infected with low concentrations of C. irritans can be effectively restored, whereas a high concentration infection induced severe stress. The declined food intake and accelerated respiratory rate could be useful for an early warning system as important indicators.

Spontaneous passage of long, sharp gastrointestinal foreign body in a child.

PubMed

Karthikeyan, Vilvapathy Senguttuvan; Ansari, Mohammed Gaffoor; Suresh, Ramasamy; Easwaran, Bettaiyagowder

2015-01-19

Foreign body (FB) ingestion is a common problem in children. Up to 90% of these FBs pass spontaneously. FBs reaching the stomach usually pass out spontaneously. Exceptions to this spontaneous passage include a long FB that cannot cross the pylorus, duodenum or ileocaecal junction. We present a case of a 9-year boy who accidentally ingested a long paper pin, which spontaneously passed in 26 h. This case is being reported to highlight the successful spontaneous passage of a 4 cm long sharp foreign body in a child. 2015 BMJ Publishing Group Ltd.

Vulnerability of larval and juvenile white sturgeon to barotrauma: can they handle the pressure?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Richard S.; Cook, Katrina V.; Pflugrath, Brett D.

2013-07-01

Techniques were developed to determine which life stages of fish are vulnerable to barotrauma from expansion of internal gases during decompression. Eggs, larvae and juvenile hatchery-reared white sturgeon (Acipenser transmontanus; up to 91 days post hatch; dph), were decompressed to assess vulnerability to barotrauma and identify initial swim bladder inflation. Barotrauma related injury and mortality were first observed 9 dph, on the same day as initial exogenous feeding. However, barotrauma related injury did not occur again until swim bladder inflation 75 dph (visible from necropsy and x-ray radiographs). Swim bladder inflation was not consistent among individuals, with only 44% beingmore » inflated 91 dph. Additionally, swim bladder inflation did not appear to be size dependent among fish ranging in total length from 61-153 mm at 91 dph. The use of a combination of decompression tests and x-ray radiography was validated as a method to determine initial swim bladder inflation and vulnerability to barotrauma. Extending these techniques to other species and life history stages would help to determine fish susceptibility to hydroturbine passage and aid in fish conservation.« less

Assessing the Effects of Water Rights Purchases on Dissolved Oxygen, Stream Temperatures, and Fish Habitat

NASA Astrophysics Data System (ADS)

Mouzon, N. R.; Null, S. E.

2014-12-01

Human impacts from land and water development have degraded water quality and altered the physical, chemical, and biological integrity of Nevada's Walker River. Reduced instream flows and increased nutrient concentrations affect native fish populations through warm daily stream temperatures and low nightly dissolved oxygen concentrations. Water rights purchases are being considered to maintain instream flows, improve water quality, and enhance habitat for native fish species, such as Lahontan cutthroat trout. This study uses the River Modeling System (RMSv4), an hourly, physically-based hydrodynamic and water quality model, to estimate streamflows, temperatures, and dissolved oxygen concentrations in the Walker River. We simulate thermal and dissolved oxygen changes from increased streamflow to prioritize the time periods and locations that water purchases most enhance native trout habitat. Stream temperatures and dissolved oxygen concentrations are proxies for trout habitat. Monitoring results indicate stream temperature and dissolved oxygen limitations generally exist in the 115 kilometers upstream of Walker Lake (about 37% of the study area) from approximately May through September, and this reach currently acts as a water quality barrier for fish passage.

Use of Fish Telemetry in Rehabilitation Planning, Management, and Monitoring in Areas of Concern in the Laurentian Great Lakes

NASA Astrophysics Data System (ADS)

Brooks, J. L.; Boston, C.; Doka, S.; Gorsky, D.; Gustavson, K.; Hondorp, D.; Isermann, D.; Midwood, J. D.; Pratt, T. C.; Rous, A. M.; Withers, J. L.; Krueger, C. C.; Cooke, S. J.

2017-12-01

Freshwater ecosystems provide many ecosystem services; however, they are often degraded as a result of human activity. To address ecosystem degradation in the Laurentian Great Lakes, Canada and the United States of America established the Great Lakes Water Quality Agreement (GLWQA). In 1987, 43 highly polluted and impacted areas were identified under the GLWQA as having one or more of 14 Beneficial Use Impairments (BUIs) to the physical and chemical habitat for fish, wildlife and humans, and were designated as Areas of Concern (AOC). Subnational jurisdictions combined with local stakeholders, with support from federal governments, developed plans to remediate and restore these sites. Biotelemetry (the tracking of animals using electronic tags) provides information on the spatial ecology of fish in the wild relevant to habitat management and stock assessment. Here, seven case studies are presented where biotelemetry data were directly incorporated within the AOC Remedial Action Plan (RAP) process. Specific applications include determining seasonal fish-habitat associations to inform habitat restoration plans, identifying the distribution of pollutant-indicator species to identify exposure risk to contamination sources, informing the development of fish passage facilities to enable fish to access fragmented upstream habitats, and assessing fish use of created or restored habitats. With growing capacity for fish biotelemetry research in the Great Lakes, we discuss the strengths and weaknesses of incorporating biotelemetry into AOC RAP processes to improve the science and practice of restoration and to facilitate the delisting of AOCs.

On measuring time metaphors.

PubMed

Sobol-Kwapinska, Malgorzata; Oles, Piotr K

2007-02-01

Referring to the 2005 article by Wittmann and Lehnhoff, the problem of using time metaphors for measuring awareness of time is posed. Starting from clarification of meaning, the Metaphors Slowness scale which was not homogeneous, an alternative interpretation of the result was proposed, given that metaphors refer to two separate aspects of time speed, an ongoing passage of time, and ex post reflection on passage of time that has already passed. The former refers to the judgment of an ongoing passage of time, and the latter to the judgment of passage of past time from a particular point in the past till now. Time perception is multifaceted and perhaps ambiguous. This particular aspect of time perception is covered by a notion of a "dialectical time", when opposite aspects of time are combined, e.g., pleasant and unpleasant ones.

Sprinting performance of two Iberian fish: Luciobarbus bocagei and Pseudochondrostoma duriense in an open channel flume

USGS Publications Warehouse

Sanz-Ronda, Francisco Javier; Ruiz-Legazpi, Jorge; Bravo-Cordoba, Francisco Javier; Makrakis, Sergio; Castro-Santos, Theodore R.

2015-01-01

This paper presents sprinting data from Iberian barbel (Luciobarbus bocagei) and northern straight-mouth nase (Pseudochondrostoma duriense), volitionally swimming against high velocity flows (1.5, 2.5 and 3 m s−1) in an open channel flume. Swimming endurance and speed greatly exceeded previously published observations with both species attaining swim speeds >20 body lengths s−1. Flow velocity was the primary variable limiting the distance both species were able to traverse. Barbel swam greater distances than nase at higher flow velocities, with longer individuals attaining greater distances than smaller ones. The results challenge established fish passage guidelines, suggesting that in some cases these species are capable of passing much higher velocities than was previously believed.

Aquatic Plant Control Research Program. White Amur Bibliography.

DTIC Science & Technology

1983-08-01

Experiments in recycling swine manure in fishponds. In: Pillay, T.V.R., and W.A. Dill (Eds.). 1979 Advances in Aquaculture. Farnham and Surrey, England...the proteolytic enzyme responses of the gut to fasting and to seasonal changes. Little cellulase activity occurs in grass carp digestion L= 7...grass carp in Soviet fish culture averages 40% (Anon. 19701). The high feeding rate is primarily due to the quick passage and imcomplete digestion

Evaluation of Planning for Fish and Wildlife, Dworshak Reservoir Project, Idaho.

DTIC Science & Technology

1981-02-01

Losses of ruffed grouse, upland game and furbearers were expected but never quantified. Although the IDFG preferred passage of wild steelhead, it...Following project construction, conditions for upland game were expected to vary depending upon each species’ habitat preference , viz: - 34 - 9 Sn a ccnSn * 0...step in the same direction before considering cat logging, cable log- ging, and roads in the areas previously designated for heli- copter yarding. If

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Skalski, J. R.; Carlson, Thomas J.

The acoustic telemetry study reported here was conducted by researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) for the U.S. Army Corps of Engineers, Portland District (USACE). The purpose of the study was to estimate dam passage survival and other performance measures for yearling and subyearling Chinook salmon and steelhead at The Dalles Dam as stipulated by the 2008 Biological Opinion on operation of the Federal Columbia River Power System (FCRPS) and 2008 Columbia Basin Fish Accords.

iTRAQ-Based Quantitative Proteomic Comparison of Early- and Late-Passage Human Dermal Papilla Cell Secretome in Relation to Inducing Hair Follicle Regeneration.

PubMed

Zhang, Huan; Zhu, Ning-Xia; Huang, Keng; Cai, Bo-Zhi; Zeng, Yang; Xu, Yan-Ming; Liu, Yang; Yuan, Yan-Ping; Lin, Chang-Min

2016-01-01

Alopecia is an exceedingly prevalent problem that lacks effective therapy. Recently, research has focused on early-passage dermal papilla cells (DPCs), which have hair inducing activity both in vivo and in vitro. Our previous study indicated that factors secreted from early-passage DPCs contribute to hair follicle (HF) regeneration. To identify which factors are responsible for HF regeneration and why late-passage DPCs lose this potential, we collected 48-h-culture medium (CM) from both of passage 3 and 9 DPCs, and subcutaneously injected the DPC-CM into NU/NU mice. Passage 3 DPC-CM induced HF regeneration, based on the emergence of a white hair coat, but passage 9 DPC-CM did not. In order to identify the key factors responsible for hair induction, CM from passage 3 and 9 DPCs was analyzed by iTRAQ-based quantitative proteomic technology. We identified 1360 proteins, of which 213 proteins were differentially expressed between CM from early-passage vs. late-passage DPCs, including SDF1, MMP3, biglycan and LTBP1. Further analysis indicated that the differentially-expressed proteins regulated the Wnt, TGF-β and BMP signaling pathways, which directly and indirectly participate in HF morphogenesis and regeneration. Subsequently, we selected 19 proteins for further verification by multiple reaction monitoring (MRM) between the two types of CM. These results indicate DPC-secreted proteins play important roles in HF regeneration, with SDF1, MMP3, biglycan, and LTBP1 being potential key inductive factors secreted by dermal papilla cells in the regeneration of hair follicles.

Development of external and neutrally buoyant acoustic transmitters for turbine passage evaluation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhiqun; Brown, Richard S.; Carlson, Thomas J.

Recent studies show transmitters surgically implanted into juvenile salmonids, for the purposes of estimating survival of fish passing through turbines, increases the risk of injury and mortality due to the presence of the tag and exposure to rapid turbine pressure changes. Neutrally buoyant external tags may instead be used to eliminate this bias. However, the externally tagged fish could be affected by other factors such as shear and turbulence which may also bias survival estimates. Studies have been conducted to examine the influence of shear and turbulence on non-tagged juvenile salmonids, however, tests have never been conducted in the laboratorymore » or field to determine the influence of shear and turbulence on retention and injury related to attachment of external transmitters. We designed and manufactured two different configurations of neutrally buoyant (nearly zero g weight in water) external transmitters: Type A and Type B. The Type A transmitters weigh approximately 0.60 g in air and are attached to fish using two sutures anterior to the dorsal fin. The Type B transmitters weigh approximately 0.83 g in air and consist of battery part and transducer part with both parts neutrally buoyant. They are attached to both sides of the dorsal fin using two enamel coated 25 gauge magnet wires. This study provides a broad approach using evaluation measures such as holding, swimming performance, shear, turbulence, rapid decompression exposures, and predation to determine the efficacy of using neutrally buoyant external transmitters to estimate survival of juvenile salmonids passing through turbines. Preliminary results show the Type A design is a viable design for turbine passage evaluation and is being planned for field deployment in the near future.« less

Fish community dynamics following dam removal in a fragmented agricultural stream

USGS Publications Warehouse

Kornis, Matthew; Weidel, Brian C.; Powers, Stephens; Diebel, Matthew W.; Cline, Timpthy; Fox, Justin; Kitchell, James F.

2014-01-01

Habitat fragmentation impedes dispersal of aquatic fauna, and barrier removal is increasingly used to increase stream network connectivity and facilitate fish dispersal. Improved understanding of fish community response to barrier removal is needed, especially in fragmented agricultural streams where numerous antiquated dams are likely destined for removal. We examined post-removal responses in two distinct fish communities formerly separated by a small aging mill dam. The dam was removed midway through the 6 year study, enabling passage for downstream fishes affiliated with a connected reservoir into previously inaccessible habitat, thus creating the potential for taxonomic homogenization between upstream and downstream communities. Both communities changed substantially post-removal. Two previously excluded species (white sucker, yellow perch) established substantial populations upstream of the former dam, contributing to a doubling of total fish biomass. Meanwhile, numerical density of pre-existing upstream fishes declined. Downstream, largemouth bass density was inversely correlated with prey fish density throughout the study, while post-removal declines in bluegill density coincided with cooler water temperature and increased suspended and benthic fine sediment. Upstream and downstream fish communities became more similar post-removal, represented by a shift in Bray-Curtis index from 14 to 41 % similarity. Our findings emphasize that barrier removal in highly fragmented stream networks can facilitate the unintended and possibly undesirable spread of species into headwater streams, including dispersal of species from remaining reservoirs. We suggest that knowledge of dispersal patterns for key piscivore and competitor species in both the target system and neighboring systems may help predict community outcomes following barrier removal.

Entrainment, retention, and transport of freely swimming fish in junction gaps between commercial barges operating on the Illinois Waterway

USGS Publications Warehouse

Davis, Jeremiah J.; Jackson, P. Ryan; Engel, Frank; LeRoy, Jessica Z.; Neeley, Rebecca N.; Finney, Samuel T.; Murphy, Elizabeth A.

2016-01-01

Large Electric Dispersal Barriers were constructed in the Chicago Sanitary and Ship Canal (CSSC) to prevent the transfer of invasive fish species between the Mississippi River Basin and the Great Lakes Basin while simultaneously allowing the passage of commercial barge traffic. We investigated the potential for entrainment, retention, and transport of freely swimming fish within large gaps (> 50 m3) created at junction points between barges. Modified mark and capture trials were employed to assess fish entrainment, retention, and transport by barge tows. A multi-beam sonar system enabled estimation of fish abundance within barge junction gaps. Barges were also instrumented with acoustic Doppler velocity meters to map the velocity distribution in the water surrounding the barge and in the gap formed at the junction of two barges. Results indicate that the water inside the gap can move upstream with a barge tow at speeds near the barge tow travel speed. Water within 1 m to the side of the barge junction gaps was observed to move upstream with the barge tow. Observed transverse and vertical water velocities suggest pathways by which fish may potentially be entrained into barge junction gaps. Results of mark and capture trials provide direct evidence that small fish can become entrained by barges, retained within junction gaps, and transported over distances of at least 15.5 km. Fish entrained within the barge junction gap were retained in that space as the barge tow transited through locks and the Electric Dispersal Barriers, which would be expected to impede fish movement upstream.

Factors affecting route selection and survival of steelhead kelts at Snake River dams in 2012 and 2013

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harnish, Ryan A.; Colotelo, Alison H. A.; Li, Xinya

2015-03-31

In 2012 and 2013, Pacific Northwest National Laboratory (PNNL) conducted a study that summarized the passage route proportions and route-specific survival rates of steelhead kelts that passed through Federal Columbia River Power System (FCRPS) dams. To accomplish this, a total of 811 steelhead kelts were tagged with Juvenile Salmon Acoustic Telemetry System (JSATS) transmitters. Acoustic receivers, both autonomous and cabled, were deployed throughout the FCRPS to monitor the downstream movements of tagged kelts. Kelts were also tagged with passive integrated transponder tags to monitor passage through juvenile bypass systems (JBS) and detect returning fish. The current study evaluated data collectedmore » in 2012 and 2013 to identify environmental, temporal, operational, individual, and behavioral variables that were related to forebay residence time, route of passage, and survival of steelhead kelts at FCRPS dams on the Snake River. Multiple approaches, including 3-D tracking, bivariate and multivariable regression modeling, and decision tree analyses were used to identify the environmental, temporal, operational, individual, and behavioral variables that had the greatest effect on forebay residence time, route of passage, and route-specific and overall dam passage survival probabilities for tagged kelts at Lower Granite (LGR), Little Goose (LGS), and Lower Monumental (LMN) dams. In general, kelt behavior and discharge appeared to work independently to affect forebay residence times. Kelt behavior, primarily approach location, migration depth, and “searching” activities in the forebay, was found to have the greatest influence on their route of passage. The condition of kelts was the single most important factor affecting their survival. The information gathered in this study may be used by dam operators and fisheries managers to identify potential management actions to improve in-river survival of kelts or collection methods for kelt reconditioning programs to aid the recovery of Snake River steelhead populations.« less

Evaluation of a Prototype Surface Flow Bypass for Juvenile Salmon and Steelhead at the Powerhouse of Lower Granite Dam, Snake River, Washington, 1996-2000

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Anglea, Steven M.; Adams, Noah S.

2005-02-28

A surface flow bypass provides a route in the upper water column for naturally, surface-oriented juvenile salmonids to safely migrate through a hydroelectric dam. Surface flow bypasses were recommended in several regional salmon recovery plans as a means to increase passage survival of juvenile salmonids at Columbia and Snake River dams. A prototype surface flow bypass, called the SBC, was retrofit on Lower Granite Dam and evaluated from 1996 to 2000 using biotelemetry and hydroacoustic techniques. In terms of passage efficiency, the best SBC configurations were a surface skimmer (99 m3/s [3,500 cfs], three entrances 5 m wide, 5 mmore » deep and one entrance 5 m wide, 15 m deep) and a single chute (99 m3/s, one entrance 5 m wide, 8.5 m deep). They each passed 62 ? 3% (95% confidence interval) of the total juvenile fish population that entered the section of the dam with the SBC entrances (Turbine Units 4-5). Smooth entrance shape and concentrated surface flow characteristics of these configurations are worth pursuing in designs for future surface flow bypasses. In addition, a guidance wall in the Lower Granite Dam forebay diverted the following percentages of juvenile salmonids away from Turbine Units 1-3 toward other passage routes, including the SBC: run-at-large 79 ? 18%; hatchery steelhead 86%; wild steelhead 65%; and yearling chinook salmon 66%. When used in combination with spill or turbine intake screens, a surface flow bypass with a guidance wall can produce a high level (> 90% of total project passage) of non-turbine passage and provide operational flexibility to fisheries managers and dam operators responsible for enhancing juvenile salmonid survival.« less

An evaluation of fish behavior upstream of the water temperature control tower at Cougar Dam, Oregon, using acoustic cameras, 2013

USGS Publications Warehouse

Adams, Noah S.; Smith, Collin; Plumb, John M.; Hansen, Gabriel S.; Beeman, John W.

2015-07-06

This report describes the initial year of a 2-year study to determine the feasibility of using acoustic cameras to monitor fish movements to help inform decisions about fish passage at Cougar Dam near Springfield, Oregon. Specifically, we used acoustic cameras to measure fish presence, travel speed, and direction adjacent to the water temperature control tower in the forebay of Cougar Dam during the spring (May, June, and July) and fall (September, October, and November) of 2013. Cougar Dam is a high-head flood-control dam, and the water temperature control tower enables depth-specific water withdrawals to facilitate adjustment of water temperatures released downstream of the dam. The acoustic cameras were positioned at the upstream entrance of the tower to monitor free-ranging subyearling and yearling-size juvenile Chinook salmon (Oncorhynchus tshawytscha). Because of the large size discrepancy, we could distinguish juvenile Chinook salmon from their predators, which enabled us to measure predators and prey in areas adjacent to the entrance of the tower. We used linear models to quantify and assess operational and environmental factors—such as time of day, discharge, and water temperature—that may influence juvenile Chinook salmon movements within the beam of the acoustic cameras. Although extensive milling behavior of fish near the structure may have masked directed movement of fish and added unpredictability to fish movement models, the acoustic-camera technology enabled us to ascertain the general behavior of discrete size classes of fish. Fish travel speed, direction of travel, and counts of fish moving toward the water temperature control tower primarily were influenced by the amount of water being discharged through the dam.

Abundance of commercially important reef fish indicates different levels of over-exploitation across shelves of the U.S. Virgin Islands

PubMed Central

Brandt, Marilyn; Nemeth, Richard; Martens, Justin; Blondeau, Jeremiah; Smith, Tyler

2017-01-01

The United States Virgin Islands are comprised of two separate insular platforms separated by the deep water Anegada Passage. Although managed by the same regulations, as one fishery, several physical and spatial differences exist between the two northern shelf islands, St. Thomas and St. John, and isolated St. Croix. Based on two long-term fisheries independent datasets, collected by the U.S. Virgin Islands Territorial Coral Reef Monitoring Program and the National Oceanographic and Atmospheric Administration Center for Coastal Monitoring and Assessment, there were significant differences between the northern USVI and St. Croix in both the occurrence and size of several species of large and commercially important reef fishes. These fishes are primarily apex piscivores and generally the first species over-exploited in small-scale fisheries. The disparities between the fish communities on the two island shelves cannot be explained solely by differences in habitat (coral cover, rugosity) or fisheries management, such as relative amount of marine protected area in local waters. They are instead probably caused by a combination of several other interrelated factors including water depth, fishing methodology, fishable area, and the presence or absence of viable fish spawning areas. This study considers those aspects, and illustrates the need for management of island artisanal fisheries that is tailored to the physical and spatial constraints imposed by insular platforms. PMID:28704387

Behavior patterns and fates of adult steelhead, Chinook salmon, and coho salmon released into the upper Cowlitz River Basin, 2005–09 and 2012, Washington

USGS Publications Warehouse

Kock, Tobias J.; Ekstrom, Brian K.; Liedtke, Theresa L.; Serl, John D.; Kohn, Mike

2016-08-26

A multiyear radiotelemetry evaluation was conducted to monitor adult steelhead (Oncorhynchus mykiss), Chinook salmon (O. tshawytscha), and coho salmon (O. kisutch) behavior and movement patterns in the upper Cowlitz River Basin. Volitional passage to this area was eliminated by dam construction in the mid-1960s, and a reintroduction program began in the mid-1990s. Fish are transported around the dams using a trap-and-haul program, and adult release sites are located in Lake Scanewa, the uppermost reservoir in the system, and in the Cowlitz and Cispus Rivers. Our goal was to estimate the proportion of tagged fish that fell back downstream of Cowlitz Falls Dam before the spawning period and to determine the proportion that were present in the Cowlitz and Cispus Rivers during the spawning period. Fallback is important because Cowlitz Falls Dam does not have upstream fish passage, so fish that pass the dam are unable to move back upstream and spawn. A total of 2,051 steelhead and salmon were tagged for the study, which was conducted during 2005–09 and 2012, and 173 (8.4 percent) of these regurgitated their transmitter prior to, or shortly after release. Once these fish were removed from the dataset, the final number of fish that was monitored totaled 1,878 fish, including 647 steelhead, 770 Chinook salmon, and 461 coho salmon.Hatchery-origin (HOR) and natural-origin (NOR) steelhead, Chinook salmon, and coho salmon behaved differently following release into Lake Scanewa. Detection records showed that the percentage of HOR fish that moved upstream and entered the Cowlitz River or Cispus River after release was relatively low (steelhead = 38 percent; Chinook salmon = 67 percent; coho salmon = 41 percent) compared to NOR fish (steelhead = 84 percent; Chinook salmon = 82 percent; coho salmon = 76 percent). The elapsed time from release to river entry was significantly lower for NOR fish than for HOR fish for all three species. Tagged fish entered the Cowlitz River in greater proportions than the Cispus River, regardless of origin. We found that 23–47 percent of the HOR fish entered the Cowlitz River and 12–38 percent entered the Cispus River. Similarly, 67–70 percent of the NOR fish entered the Cowlitz River and 38–66 percent entered the Cispus River. These behavioral differences translated into similar differences in fates during the spawning periods as higher percentages of tagged fish were assigned Cowlitz River fates than Cispus River fates.Fallback rates were affected by fish origin and release site. Overall, 12 percent of steelhead, 19 percent of Chinook salmon, and 8 percent of coho salmon fell back downstream of Cowlitz Falls Dam prior to spawning. Fallback rates were lower for fish that were released in the Cowlitz River or the Cispus River than for reservoir-released fish, but statistical comparisons were not robust because of small sample sizes at the river release sites. Fallback rates for fish released at the river release sites were 10 percent lower for steelhead, 4 percent lower for Chinook salmon, and 9 percent lower for coho salmon than for reservoir-released fish. However, fallback rates also were different between HOR and NOR fish. Fallback rates were significantly higher for HOR reservoir-released fish than for NOR reservoir-released fish.This study provided data that were insightful for understanding behavior and movement patterns in the upper Cowlitz River Basin and yielded estimates of fallback rates and fish fates that may be useful for fishery managers in the years to come. Studies from other systems have shown that factors such as prespawn mortality and fallback have resulted in substantial losses to spawning populations where trap-and-haul programs are being used as a restoration tool. Future research in the upper Cowlitz River Basin may use additional telemetry studies, genetic analyses, and spawning ground surveys to provide answers for new questions and to continue to monitor the progress of the reintroduction effort.

Monitoring and Evaluation of Smolt Migration in the Columbia Basin : Volume IX : Evaluation of the 2001 Predictions of the Run-Timing of Wild and Hatchery-Reared Migrant Salmon and Steelhead Trout Migrating to Lower Granite, Rock Island, McNary, and John Day Dams using Program RealTime.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burgess, Caitlin; Skalski, John R.

2001-12-01

Program RealTime provided tracking and forecasting of the 2001 inseason outmigration via the internet for eighteen PIT-tagged stocks of wild salmon and steelhead to Lower Granite and/or McNary dams and eleven passage-indexed stocks to Rock Island, McNary, or John Day dams. Nine of the PIT-tagged stocks tracked this year were new to the project. Thirteen ESUs of wild subyearling and yearling chinook salmon and steelhead, and one ESU of hatchery-reared sockeye salmon were tracked and forecasted to Lower Granite Dam. Eight wild ESUs of subyearling and yearling chinook salmon, sockeye salmon and steelhead were tracked to McNary Dam for themore » first time this year. Wild PIT-tagged ESUs tracked to Lower Granite Dam included yearling spring/summer chinook salmon release-recovery stocks (from Bear Valley Creek, Catherine Creek, Herd Creek, Imnaha River, Johnson Creek, Lostine River, Minam River, South Fork Salmon River, Secesh River, and Valley Creek), PIT-tagged wild runs-at-large of yearling chinook salmon and steelhead, and a PIT-tagged stock of subyearling fall chinook salmon. The stock of hatchery-reared PIT-tagged summer-run sockeye salmon smolts outmigrating to Lower Granite Dam, consisted this year of a new stock of fish from Alturas Lake Creek, Redfish Lake Creek Trap and Sawtooth Trap. The passage-indexed stocks, counted using FPC passage indices, included combined wild- and hatchery-reared runs-at-large of subyearling and yearling chinook, coho, and sockeye salmon, and steelhead migrating to Rock Island and McNary dams, and, new this year, combined wild and hatchery subyearling chinook salmon to John Day Dam. Unusual run-timing and fish passage characteristics were observed in this low-flow, negligible-spill migration year. The period for the middle 80% of fish passage (i.e., progress from the 10th to the 90th percentiles) was unusually short for nine out of ten PIT-tagged yearling spring/summer chinook salmon stocks tracked to Lower Granite Dam. It was the shortest on record for seven of these ten stocks. The nine stocks recording unusually short middle 80% periods also recorded higher-than-average recovery percentages. However the opposite trend was observed for the PIT-tagged wild subyearling chinook salmon and hatchery sockeye salmon stocks whose middle 80% period of passage to Lower Granite Dam was average to above average. Recovery percentages for these two stocks were average, compared to historical recoveries. The performance results of Program RealTime to make accurate predictions of percentiles of fish passage at an index site were mixed this year. The release-recovery stocks of wild PIT-tagged spring/summer chinook salmon tracked to Lower Granite Dam were predicted less accurately than usual, on average, with two exceptions. One of these exceptions was a stock that had its best prediction (first-half, last-half, and season-wide) ever to occur. On average, however, performance was down for predicting these stocks. The RealTime Select composite season-wide MAD was 4.3%, larger than the historical average of 2.1%. Passage percentiles for PIT-tagged runs-at-large of wild Snake River yearling and subyearling chinook salmon and of wild steelhead outmigrating to Lower Granite Dam were predicted very well this year, their second year of inclusion in the project, with season-wide MADs of 3.6%, 4.7%, and 1.8% respectively. These results, too, were mixed with respect to comparison with last year's performance. The yearling chinook stock was predicted somewhat better last year (up from 1.7% last year to 3.6% this year) but the subyearling chinook salmon and steelhead stocks were predicted better this year than last, season-wide. The steelhead stock, in particular, was predicted much better this year than last year, down to 1.8% this year from 4.8% last year. The PIT-tagged runs-at-large of wild salmon and steelhead tracked to McNary Dam in 2001 for the first time, were also well-predicted. In particular, the Snake River stocks were well-predicted, with season-wide MADs of 4.7% for subyearling chinook salmon, 3.3% for yearling chinook salmon, and 1.4% for steelhead. All three Snake River stocks were better predicted at McNary Dam than they were at Lower Granite Dam. The Upper Columbia River PIT-tagged runs-at-large of wild subyearling chinook salmon and wild steelhead were not predicted with the remarkable accuracy of the Snake River stocks, but RealTime performance for these stocks was still good, with season-wide MADs of 7.9% and 4.9%, respectively. The results of RealTime predictions of FPC passage-indexed percentiles of combined wild and hatchery-reared salmonids to Rock Island and McNary dams were comparable to last year with respect to the large variability in performance. Like last year some runs were predicted very well while others were predicted very poorly. The stocks predicted best and worst last year were not necessarily the stocks predicted best and worst this year.« less

The importance of defining technical issues in interagency environmental negotiations

USGS Publications Warehouse

Lamb, B.L.; Burkardt, N.; Taylor, J.G.

2001-01-01

The role of technical clarity in successful multiparty negotiations was studied. Investigations involved in-depth interviews with the principal participants in six consultations conducted under the U.S. Federal Energy Regulatory Commission’s hydroelectric power project licensing procedures. Technical clarity was especially important in these cases because they concerned science-based questions. The principal issues in the six cases were fish passage, instream flow for fish habitat, and entrainment of fish in hydropower turbines. It was concluded that technical clarity was one of the most critical elements in resolving these conflicts. In the least successful negotiations, parties failed to address the basic values of the dispute before plunging into technical studies. The results of those studies usually highlighted the potential for negative outcomes and increased polarization between the participants. In the most successful negotiations, the various parties shared an understanding of each of their basic values. These shared understandings led to technical studies that cast the negotiation in a positive light and illuminated possible solutions.

Design and Implementation of a new Autonomous Sensor Fish to Support Advanced Hydropower Development

DOE PAGES

Deng, Zhiqun; Lu, Jun; Myjak, Mitchell J.; ...

2014-11-04

Acceleration in development of additional conventional hydropower requires tools and methods to perform laboratory and in-field validation of turbine performance and fish passage claims. The new-generation Sensor Fish has been developed with more capabilities to accommodate a wider range of users over a wider range of turbine designs and operating environments. It provides in situ measurements of three dimensional (3D) accelerations, 3D rotational velocities, 3D orientation, pressure, and temperature at a sampling frequency of 2048 Hz. It also has an automatic floatation system and built-in radio frequency transmitter for recovery. The relative errors of the pressure, acceleration and rotational velocitymore » were within ±2%, ±5%, and ±5%, respectively. The accuracy of orientation was within ±4° and accuracy of temperature was ±2°C. It is being deployed to evaluate the biological effects of turbines or other hydraulic structures in several countries.« less

New notch weir system designed to pass shad through Potomac Dam

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1996-08-01

This article discusses the design and functional characteristics of a notch and three-weir labyrinth fish passage facility at Little Falls Dam. Most effective at low-head hydroelectric power plants, the weir system will reduce flow velocities to a value thought to be low enough for healthy shad to swim against. It is felt that this system will re-establish the shad population in a 10-mile stretch of the Patomac River near Washington.

Use of fish telemetry in rehabilitation planning, management, and monitoring in Areas of Concern in the Laurentian Great Lakes

USGS Publications Warehouse

Brooks, J.L.; Boston, C.; Doka, Susan E.; Gorsky, Dimitry; Gustavson, K.; Hondorp, Darryl W.; Isermann, Daniel A.; Midwood, Jonathan D.; Pratt, T.C.; Rous, Andrew M.; Withers, J. L.; Krueger, C.C.; Cooke, S.J.

2017-01-01

Freshwater ecosystems provide many ecosystem services; however, they are often degraded as a result of human activity. To address ecosystem degradation in the Laurentian Great Lakes, Canada and the United States of America established the Great Lakes Water Quality Agreement (GLWQA). In 1987, 43 highly polluted and impacted areas were identified under the GLWQA as having one or more of 14 Beneficial Use Impairments (BUIs) to the physical and chemical habitat for fish, wildlife and humans, and were designated as Areas of Concern (AOC). Subnational jurisdictions combined with local stakeholders, with support from federal governments, developed plans to remediate and restore these sites. Biotelemetry (the tracking of animals using electronic tags) provides information on the spatial ecology of fish in the wild relevant to habitat management and stock assessment. Here, seven case studies are presented where biotelemetry data were directly incorporated within the AOC Remedial Action Plan (RAP) process. Specific applications include determining seasonal fish–habitat associations to inform habitat restoration plans, identifying the distribution of pollutant-indicator species to identify exposure risk to contamination sources, informing the development of fish passage facilities to enable fish to access fragmented upstream habitats, and assessing fish use of created or restored habitats. With growing capacity for fish biotelemetry research in the Great Lakes, we discuss the strengths and weaknesses of incorporating biotelemetry into AOC RAP processes to improve the science and practice of restoration and to facilitate the delisting of AOCs.

Importance of reservoir tributaries to spawning of migratory fish in the upper Paraná River

USGS Publications Warehouse

da Silva, P.S.; Makrakis, Maristela Cavicchioli; Miranda, Leandro E.; Makrakis, Sergio; Assumpcao, L.; Paula, S.; Dias, João Henrique Pinheiro; Marques, H.

2015-01-01

Regulation of rivers by dams transforms previously lotic reaches above the dam into lentic ones and limits or prevents longitudinal connectivity, which impairs access to suitable habitats for the reproduction of many migratory fish species. Frequently, unregulated tributaries can provide important habitat heterogeneity to a regulated river and may mitigate the influence of impoundments on the mainstem river. We evaluated the importance of tributaries to spawning of migratory fish species over three spawning seasons, by comparing several abiotic conditions and larval fish distributions in four rivers that are tributaries to an impounded reach of the Upper Parana River, Brazil. Our study confirmed reproduction of at least 8 long-distance migrators, likely nine, out of a total of 19 occurring in the Upper Parana River. Total larval densities and percentage species composition differed among tributaries, but the differences were not consistent among spawning seasons and unexpectedly were not strongly related to annual differences in temperature and hydrology. We hypothesize that under present conditions, densities of larvae of migratory species may be better related to efficiency of fish passage facilities than to temperature and hydrology. Our study indicates that adult fish are finding suitable habitat for spawning in tributaries, fish eggs are developing into larvae, and larvae are finding suitable rearing space in lagoons adjacent to the tributaries. Our findings also suggest the need for establishment of protected areas in unregulated and lightly regulated tributaries to preserve essential spawning and nursery habitats.

Inverse design of a proper number, shapes, sizes, and locations of coolant flow passages

NASA Technical Reports Server (NTRS)

Dulikravich, George S.

1992-01-01

During the past several years we have developed an inverse method that allows a thermal cooling system designer to determine proper sizes, shapes, and locations of coolant passages (holes) in, say, an internally cooled turbine blade, a scram jet strut, a rocket chamber wall, etc. Using this method the designer can enforce a desired heat flux distribution on the hot outer surface of the object, while simultaneously enforcing desired temperature distributions on the same hot outer surface as well as on the cooled interior surfaces of each of the coolant passages. This constitutes an over-specified problem which is solved by allowing the number, sizes, locations and shapes of the holes to adjust iteratively until the final internally cooled configuration satisfies the over-specified surface thermal conditions and the governing equation for the steady temperature field. The problem is solved by minimizing an error function expressing the difference between the specified and the computed hot surface heat fluxes. The temperature field analysis was performed using our highly accurate boundary integral element code with linearly varying temperature along straight surface panels. Examples of the inverse design applied to internally cooled turbine blades and scram jet struts (coated and non-coated) having circular and non-circular coolant flow passages will be shown.

Fish community response to dam removal in a Maine coastal river tributary

USGS Publications Warehouse

Zydlewski, Joseph D.; Hogg, Robert S.; Coghlan, Stephen M.; Gardner, Cory

2016-01-01

Sedgeunkedunk Stream, a third-order tributary to the Penobscot River in Maine, historically has supported several anadromous fishes including Atlantic Salmon Salmo salar, Alewife Alosa pseudoharengus, and Sea Lamprey Petromyzon marinus. Two small dams constructed in the 1800s reduced or eliminated spawning runs entirely. In 2009, efforts to restore marine–freshwater connectivity in the system culminated in removal of the lowermost dam (Mill Dam) providing access to 4.7 km of lotic habitat and unimpeded passage into the lentic habitat of Fields Pond. In anticipation of these barrier removals, we initiated a modified before-after-control-impact study, and monitored stream fish assemblages in fixed treatment and reference sites. Electrofishing surveys were conducted twice yearly since 2007. Results indicated that density, biomass, and diversity of the fish assemblage increased at all treatment sites upstream of the 2009 dam removal. No distinct changes in these metrics occurred at reference sites. We documented recolonization and successful reproduction of Atlantic Salmon, Alewife, and Sea Lamprey in previously inaccessible upstream reaches. These results clearly demonstrate that dam removal has enhanced the fish assemblage by providing an undisrupted stream gradient linking a small headwater lake and tributary with a large coastal river, its estuary, and the Atlantic Ocean.

Migratory movements of pacu, Piaractus mesopotamicus, in the highly impounded Paraná River

USGS Publications Warehouse

Makrakis, M.C.; Miranda, L.E.; Makrakis, S.; Xavier, A.M.M.; Fontes, H.M.; Morlis, W.G.

2007-01-01

A mark-recapture study was conducted in 1997–2005 to investigate movements of stocked pacu, Piaractus mesopotamicus, in the Paraná River Basin of Brazil, Paraguay, and Argentina. Fish raised in cages within the Itaipu Reservoir and in ponds were tagged externally (n = 2976) and released in the Itaipu Reservoir (53.2%) and bays of its major tributaries (46.8%). In total, 367 fish (12.3%) were recaptured. In all, 91% of the pacu moved away from the release site; upstream movements were more extensive than downstream movements. Pacu traveled upstream a maximum of 422 km (average of 41.3 km) at a maximum rate of 26.4 km day−1 (av. 0.8). Downstream movements were limited in terms of number of individuals and distance moved. Fish released during the wet season moved farther than those released during the dry season, and feeding rather than spawning might have been the compelling reason for movement. Although fish passed downstream through dams, none of the marked fish were detected to have moved upstream through the passage facilities. Pacu showed movement patterns not radically different from those of other neotropical migratory species, but their migratory movements may not be as extensive as those of other large migratory species in the basin.

Efforts to reduce mortality to hydroelectric turbine-passed fish: locating and quantifying damaging shear stresses.

PubMed

Cada, Glenn; Loar, James; Garrison, Laura; Fisher, Richard; Neitzel, Duane

2006-06-01

Severe fluid forces are believed to be a source of injury and mortality to fish that pass through hydroelectric turbines. A process is described by which laboratory bioassays, computational fluid dynamics models, and field studies can be integrated to evaluate the significance of fluid shear stresses that occur in a turbine. Areas containing potentially lethal shear stresses were identified near the stay vanes and wicket gates, runner, and in the draft tube of a large Kaplan turbine. However, under typical operating conditions, computational models estimated that these dangerous areas comprise less than 2% of the flow path through the modeled turbine. The predicted volumes of the damaging shear stress zones did not correlate well with observed fish mortality at a field installation of this turbine, which ranged from less than 1% to nearly 12%. Possible reasons for the poor correlation are discussed. Computational modeling is necessary to develop an understanding of the role of particular fish injury mechanisms, to compare their effects with those of other sources of injury, and to minimize the trial and error previously needed to mitigate those effects. The process we describe is being used to modify the design of hydroelectric turbines to improve fish passage survival.

Modeling survival of juvenile salmon during downriver migration in the Columbia River on a microcomputer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peloquin, R.A.; McKenzie, D.H.

1994-10-01

A compartmental model has been implemented on a microcomputer as an aid in the analysis of alternative solutions to a problem. The model, entitled Smolt Survival Simulator, simulates the survival of juvenile salmon during their downstream migration and passage of hydroelectric dams in the Columbia River. The model is designed to function in a workshop environment where resource managers and fisheries biologists can study alternative measures that may potentially increase juvenile anadromous fish survival during downriver migration. The potential application of the model has placed several requirements on the implementing software. It must be available for use in workshop settings.more » The software must be easily to use with minimal computer knowledge. Scenarios must be created and executed quickly and efficiently. Results must be immediately available. Software design emphasis vas placed on the user interface because of these requirements. The discussion focuses on methods used in the development of the SSS software user interface. These methods should reduce user stress and alloy thorough and easy parameter modification.« less

Marine litter on the seafloor of the Faial-Pico Passage, Azores Archipelago.

PubMed

Rodríguez, Yasmina; Pham, Christopher K

2017-03-15

Plastic pollution in the marine environment attracts much attention from both researchers and the general public. Plastic items and other debris are commonly observed everywhere in the ocean, from the surface down to the deep ocean floor. In this study, we analysed 45.2km of video footage, collected during 56 transects surveying the seafloor of the Faial-Pico Passage in order to quantify the abundance of marine litter and its interactions with benthic fauna. The footage was collected by a Remotely Operated Vehicle (ROV) and a manned submersible at depths ranging between 40 and 525m. The mean litter density in the passage was 0.26±0.03 items·100m -1 (±SE) and was significantly higher between 151 and 250m compared to other depth strata. Overall, derelict fishing gear, mostly made of plastic, were the most common objects found on the seafloor, representing 64% of all items. Although we observed few evidence of direct deleterious effects by the litter, interactions with fauna were observed in more than half of the items. This study makes an important contribution in quantifying the abundance of marine litter on the seafloor of the Azores. The location of the Faial-Pico Passage, close to shore, makes it an appropriate site for long-term monitoring of litter on the seafloor and evaluate the efficiency of upcoming public policies aimed at reducing litter input into the oceans. Copyright © 2017 Elsevier Ltd. All rights reserved.

How to handle stuck pipe and fishing problems

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brouse, M.

1983-01-01

This paper presents valuable information on evaluating fishing problems, including a rule of thumb equation for estimating the number of days that should be spent fishing. Also given is a description and usage breakdown of the numerous tools available to the operator.

Contaminants in fishes from great lakes-influenced sections and above dams of three Michigan Rivers: III. Implications for health of bald eagles

USGS Publications Warehouse

Giesy, J.P.; Bowerman, W.W.; Mora, M.A.; Verbrugge, D.A.; Othoudt, R. A.; Newsted, J.L.; Summer, C. L.; Aulerich, R.J.; Bursian, S.J.; Ludwig, J. P.; Dawson, G. A.; Kubiak, T.J.; Best, D. A.; Tillitt, D. E.

1995-01-01

Recently, there have been discussions of the relative merits of passage of fishes around hydroelectric dams on three rivers (Au Sable, Manistee, and Muskegon) in Michigan. A hazard assessment was conducted to determine the potential for adverse effects on bald eagles that could consume such fishes from above and below dams on the three primary rivers. The hazard assessments were verified by comparing the reproductive productivities of eagles nesting in areas where they ate primarily fish from either above or below dams on the three primary rivers, as well as on two additional rivers in Michigan, the Menominee and Thunder Bay. Concentrations of organochlorine insecticides (OCI), polychlorinated biphenyls (total PCBs), 2,3,7,8-tetrachlorodibenzo-p-dioxin equivalents (TCDD-EQ), and total mercury (Hg) were measured in composite samples of fishes from above and below hydroelectric dams on the Manistee and Muskegon Rivers, which flow into Lake Michigan, and the Au Sable River, which flows into Lake Huron. Mean concentrations of OCI, total PCBs, and TCDD-EQ were all greater in fishes from below the dams than in those from above. The hazard assessment indicated that current concentrations of Hg and OCI other than DDT (DDT + DDE + DDD) in fish from neither above nor below dams would present a significant hazard to bald eagles (Haliaeetus leucocephalus). Both total PCBs and TCDD-EQ in fishes from below the dams currently present a significant hazard to bald eagles, since their mean hazard quotients (HQ) were all greater than one.

Evaluation of blade-strike models for estimating the biological performance of large Kaplan hydro turbines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Z.; Carlson, T. J.; Ploskey, G. R.

2005-11-01

Bio-indexing of hydro turbines has been identified as an important means to optimize passage conditions for fish by identifying operations for existing and new design turbines that minimize the probability of injury. Cost-effective implementation of bio-indexing requires the use of tools such as numerical and physical turbine models to generate hypotheses for turbine operations that can be tested at prototype scales using live fish. Blade strike has been proposed as an index variable for the biological performance of turbines. Report reviews an evaluation of the use of numerical blade-strike models as a means with which to predict the probability ofmore » blade strike and injury of juvenile salmon smolt passing through large Kaplan turbines on the mainstem Columbia River.« less

Klamath Basin: A Watershed Approach to Support Habitat Restoration, Species Recovery, and Water Resource Planning

USGS Publications Warehouse

VanderKooi, S.P.; Thorsteinson, L.

2007-01-01

Water allocation among human and natural resource uses in the American West is challenging. Western rivers have been largely managed for hydropower, irrigation, drinking water, and navigation. Today land and water use practices have gained importance, particularly as aging dams are faced with re-licensing requirements and provisions of the Endangered Species and Clean Water Acts. Rising demand for scarce water heightens the need for scientific research to predict consequences of management actions on habitats, human resource use, and fish and wildlife. Climate change, introduction of invasive species, or restoration of fish passage can have large, landscape-scaled consequences - research must expand to encompass the appropriate scale and by applying multiple scientific disciplines to complex ecosystem challenges improve the adaptive management framework for decision-making.

Linking behavior, physiology, and survival of Atlantic Salmon smolts during estuary migration

USGS Publications Warehouse

Stich, Daniel S.; Zydlewski, Gayle B.; Kocik, John F.; Zydlewski, Joseph D.

2015-01-01

Decreased marine survival is identified as a component driver of continued declines of Atlantic Salmon Salmo salar. However, estimates of marine mortality often incorporate loss incurred during estuary migration that may be mechanistically distinct from factors affecting marine mortality. We examined movements and survival of 941 smolts (141 wild and 800 hatchery-reared fish) released in freshwater during passage through the Penobscot River estuary, Maine, from 2005 to 2013. We related trends in estuary arrival date, movement rate, and survival to fish characteristics, migratory history, and environmental conditions in the estuary. Fish that experienced the warmest thermal history arrived in the estuary 8 d earlier than those experiencing the coolest thermal history during development. Estuary arrival date was 10 d later for fish experiencing high flow than for fish experiencing low flow. Fish released furthest upstream arrived in the estuary 3 d later than those stocked further downstream but moved 0.5 km/h faster through the estuary. Temporally, movement rate and survival in the estuary both peaked in mid-May. Spatially, movement rate and survival both decreased from freshwater to the ocean. Wild smolts arrived in the estuary later than hatchery fish, but we observed no change in movement rate or survival attributable to rearing history. Fish with the highest gill Na+, K+-ATPase activity incurred 25% lower mortality through the estuary than fish with the lowest gill Na+, K+-ATPase activity. Smolt survival decreased (by up to 40%) with the increasing number of dams passed (ranging from two to nine) during freshwater migration. These results underscore the importance of physiological preparedness on performance and the delayed, indirect effects of dams on survival of Atlantic Salmon smolts during estuary migration, ultimately affecting marine survival estimates.

John Day River Sub-Basin Fish Habitat Enhancement Project; 2008 Annual Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Powell, Russ M.; Alley, Pamela D.; Goin Jr, Lonnie

Work undertaken in 2008 included: (1) Seven new fence projects were completed thereby protecting approximately 10.97 miles of streams with 16.34 miles of riparian fence; (2) Renewal of one expired lease was completed thereby continuing to protect 0.75 miles of stream with 1.0 mile of riparian fence. (3) Maintenance of all active project fences (106.54 miles), watergaps (78), spring developments (33) were checked and repairs performed; (3) Planted 1000 willow/red osier on Fox Creek/Henslee property; (4) Planted 2000 willows/red osier on Middle Fork John Day River/Coleman property; (5) Planted 1000 willow/red osier cuttings on Fox Creek/Johns property; (6) Since themore » initiation of the Fish Habitat Project in 1984 we have 126.86 miles of stream protected using 211.72 miles of fence protecting 5658 acres. The purpose of the John Day Fish Habitat Enhancement Program is to enhance production of indigenous wild stocks of spring Chinook and summer steelhead within the sub basin through habitat protection, enhancement and fish passage improvement. The John Day River system supports the largest remaining wild runs of spring chinook salmon and summer steelhead in Northeast Oregon.« less

Vulnerability of larval and juvenile white sturgeon to barotrauma: can they handle the pressure?

PubMed

Brown, Richard S; Cook, Katrina V; Pflugrath, Brett D; Rozeboom, Latricia L; Johnson, Rachelle C; McLellan, Jason G; Linley, Timothy J; Gao, Yong; Baumgartner, Lee J; Dowell, Frederick E; Miller, Erin A; White, Timothy A

2013-01-01

Techniques were developed to determine which life stages of fish are vulnerable to barotrauma from expansion of internal gases during decompression. Eggs, larvae, and juvenile hatchery-reared white sturgeon (Acipenser transmontanus; up to 91 days post hatch; d.p.h.) were decompressed to assess vulnerability to barotrauma and identify initial swim bladder inflation. Barotrauma-related injury and mortality were first observed 9 d.p.h., on the same day as initial exogenous feeding. However, barotrauma-related injury did not occur again until swim bladder inflation 75 d.p.h. (visible at necropsy and on radiographs). Swim bladder inflation was not consistent among individuals, with only 44% being inflated 91 d.p.h. Additionally, swim bladder inflation did not appear to be size dependent among fish ranging in total length from 61 to 153 mm at 91 d.p.h. The use of a combination of decompression tests and radiography was validated as a method to determine initial swim bladder inflation and vulnerability to barotrauma. Extending these techniques to other species and life-history stages would help to determine the susceptibility of fish to hydro turbine passage and aid in fish conservation.

Vulnerability of larval and juvenile white sturgeon to barotrauma: can they handle the pressure?

PubMed Central

Brown, Richard S.; Cook, Katrina V.; Pflugrath, Brett D.; Rozeboom, Latricia L.; Johnson, Rachelle C.; McLellan, Jason G.; Linley, Timothy J.; Gao, Yong; Baumgartner, Lee J.; Dowell, Frederick E.; Miller, Erin A.; White, Timothy A.

2013-01-01

Techniques were developed to determine which life stages of fish are vulnerable to barotrauma from expansion of internal gases during decompression. Eggs, larvae, and juvenile hatchery-reared white sturgeon (Acipenser transmontanus; up to 91 days post hatch; d.p.h.) were decompressed to assess vulnerability to barotrauma and identify initial swim bladder inflation. Barotrauma-related injury and mortality were first observed 9 d.p.h., on the same day as initial exogenous feeding. However, barotrauma-related injury did not occur again until swim bladder inflation 75 d.p.h. (visible at necropsy and on radiographs). Swim bladder inflation was not consistent among individuals, with only 44% being inflated 91 d.p.h. Additionally, swim bladder inflation did not appear to be size dependent among fish ranging in total length from 61 to 153 mm at 91 d.p.h. The use of a combination of decompression tests and radiography was validated as a method to determine initial swim bladder inflation and vulnerability to barotrauma. Extending these techniques to other species and life-history stages would help to determine the susceptibility of fish to hydro turbine passage and aid in fish conservation. PMID:27293603

Assessing fish assemblages similarity above and below a dam in a neotropical reservoir with partial blockage.

PubMed

Araújo, F G; Santos, A B I; Albieri, R J

2013-11-01

Damming rivers disrupts the water flow and changes the ichthyofauna organisation. We investigated an impoundment with permanent connection and homogeneous environmental conditions between the zones above and below the dam. Temperature was comparatively higher during wet season irrespective of zone, and both zones had higher dissolved oxygen, conductivity and transparency in the dry season. A total of 1687 individuals comprising 27 species were collected in the downriver zone, while the reservoir had 879 individuals and 23 species. Each zone had different fish assemblage composition and structure, but assemblages were not explained by the examined environmental variables (r2 = 0.08; p = 0.307). Migratory species such as Pimelodus maculatus, Pimelodus fur, Leporinus copelandii and Prochilodus lineatus were the most affected, and probably are prevented to perform upriver migrations. On the other hand, lentic adapted species such as G. brasiliensis, Hoplias malabaricus and Hoplosternum littorale successfully colonised the reservoir. Therefore we conclude that the presence of the lateral hydrological connectivity alone does not guarantee the ecological connectivity since fish assemblage similarity differed between the two zones. Fish passage facilities should be monitored and managed to evaluate and improve their functionality.

Reproductive success of captively bred and naturally spawned Chinook salmon colonizing newly accessible habitat

PubMed Central

Anderson, Joseph H; Faulds, Paul L; Atlas, William I; Quinn, Thomas P

2013-01-01

Captively reared animals can provide an immediate demographic boost in reintroduction programs, but may also reduce the fitness of colonizing populations. Construction of a fish passage facility at Landsburg Diversion Dam on the Cedar River, WA, USA, provided a unique opportunity to explore this trade-off. We thoroughly sampled adult Chinook salmon (Oncorhynchus tshawytscha) at the onset of colonization (2003–2009), constructed a pedigree from genotypes at 10 microsatellite loci, and calculated reproductive success (RS) as the total number of returning adult offspring. Hatchery males were consistently but not significantly less productive than naturally spawned males (range in relative RS: 0.70–0.90), but the pattern for females varied between years. The sex ratio was heavily biased toward males; therefore, inclusion of the hatchery males increased the risk of a genetic fitness cost with little demographic benefit. Measurements of natural selection indicated that larger salmon had higher RS than smaller fish. Fish that arrived early to the spawning grounds tended to be more productive than later fish, although in some years, RS was maximized at intermediate dates. Our results underscore the importance of natural and sexual selection in promoting adaptation during reintroductions. PMID:23467446

Development and characterization of a new marine fish cell line from turbot (Scophthalmus maximus).

PubMed

Wang, N; Wang, X L; Sha, Z X; Tian, Y S; Chen, S L

2010-12-01

A new marine fish cell line, TK, derived from turbot (Scophthalmus maximus) kidney, was established by the method of trypsin digestion and subcultured for more than 50 passages over a period of 300 days. The TK cells were maintained in Minimum Essential Medium Eagle (MEM) supplemented with HEPES, antibiotics, fetal bovine serum (FBS), 2-Mercaptoethanol (2-Me), and basic fibroblast growth factor (bFGF). The suitable growth temperature for TK cells was 24°C, and microscopically, TK cells were composed of fibroblast-like cells. Chromosome analysis revealed that the TK cell line has a normal diploid karyotype with 2n=44. Two fish viruses LCDV-C (lymphocystis disease virus from China) and TRBIV (turbot reddish body iridovirus) were used to determine the virus susceptibility of TK cell line. The TK cell line was found to be susceptible to TRBIV, and the infection was confirmed by cytopathic effect (CPE) and transmission electron microscopy, which detected the viral particles in the cytoplasm of virus-infected cells. Finally, significant green fluorescent signals were observed when the TK cells were transfected with pEGFP-N3 vector, indicating its potential utility for fish virus study and genetic manipulation.

Northwest Passages: A History of the Seattle District, U.S. Army Corps of Engineers, Volume II 1920-1970

DTIC Science & Technology

2006-01-01

Reclamation, that the Corps was poaching on the Bureau’s preserve, relations between the Corps and the Bureau at the regional level proceeded...considerable opposition from fisheries interests. They denounced all dams below Foster Creek because of their impact on fish runs. In addition, the Atomic...the border. The site, however, still had major impacts on the rai lroad, timber, and mining interests in the area around the town of Libby. The Corps

Forestry practices and aquatic biodiversity: Fish

USGS Publications Warehouse

Gresswell, Robert E.

2005-01-01

In the Pacific Northwest, fish communities are found in a diverse array of aquatic habitats ranging from the large coastal rivers of the temperate rainforests, to the fragmented and sometimes ephemeral streams of the xeric interior basins, and high-elevation streams and lakes in the mountainous areas (Rieman et al. 2003). Only high-elevation lakes and streams isolated above barriers to fish passage remained historically devoid of fish because they were never invaded following Pleistocene glaciation (Smith 1981). Despite this widespread distribution and once great population abundances, taxonomic diversity of fishes in these forested systems is naturally lower than in aquatic habitats in the eastern U.S. (Reeves, Bisson, and Dambacher 1998). Interactions among factors that influence species richness in aquatic systems (e.g., basin size, long-term stability of habitat, and barriers to colonization; Smith 1981) continue to influence the occurrence and persistence of fishes in these systems today. Consequently, the larger low-elevation rivers and estuaries support the greatest variety of fish species. In the high-elevation tributary streams, fish communities are less complex because these aquatic systems were less climatically and geologically stable, and fish populations were smaller and more prone to local extirpation. Furthermore, barriers to fish passage inhibited dispersal and colonization (Smith 1981). Streams in forested landscapes generally support salmon and trout, Oncorhynchus spp., whitefish Prosopium spp., sculpins Cottus spp., suckers Catostomus spp., and minnows (Cyprinidae), but in some of the colder streams, chars (e.g., Salvelinus confluentus and Salvelinus malma) and lampreys (Petromyzontidae)may also occur (Rieman et al. 2003).Although biodiversity defined in terms of fish species richness is low in the Pacific Northwest, intraspecific variability is high, and polytypic fish species are common in the diverse aquatic habitats of the region. For example, the salmonids in the coastal rivers and streams, and the larger interconnected streams, rivers, and lakes of the interior exhibit a variety of ecotypes and migratory life histories (Healey 1986; Trotter 1989; Larson and McIntire 1993; Northcote 1997). This life-history variation appears to be associated with adaptation to spatial and temporal variation in environment (e.g., Schaffer and Elson 1975; Carl and Healey 1984; Beacham and Murray 1987), and there is some evidence of the genetic heritability of life-history traits (Carl and Healey 1984; Gharrett and Smoker 1993; Hankin, Nicholas, and Downey 1993). Persistence of any level of biological organization (e.g., life-history type, population, metapopulation, subspecies, species, community) is related to the interaction of environmental and biological components, and intraspecific diversity is a means of spreading risk (sensu den Boer 1968) of extirpation in dynamic environments (Gresswell 1999). Unfortunately, despite the broad distribution and extensive intraspecific diversity, persistence of native fishes is uncertain in the Pacific Northwest. Many populations of anadromous salmonids, once synonymous with vigorous biological communities throughout the region, are threatened with extinction (Nehlsen, Williams, and Lichatowich 1991; Frissell 1993; Thurow, Lee, and Rieman 1997). Furthermore, over half of the native taxa in the Columbia River Basin are either listed under the Endangered Species Act, are being considered for listing, or are deemed sensitive by the management agencies (Lee et al. 1997; Thurow, Lee, and Rieman 1997). Potamodromous species like bull trout Salvelinus confluentus are estimated to occur as strong populations in less than 5% of their potential range (Rieman, Lee, and Thurow 1997). Although not currently listed under the endangered species list, the coastal cutthroat trout Oncorhynchus clarki is managed as a sensitive species in Oregon and California (Hall, Bisson, and Gresswell 1997). Native non-game fishes have rarely been monitored, but populations of species such as large-scale suckers (Catostomus macrocheilus), squawfish (Ptychocheilus umpquae), and Pacific lamprey (Lampetra tridentata) also are declining in some drainages (Oregon Department of Fish and Wildlife, unpublished data).

A Winner Determination Algorithm for Combinatorial Auctions Based on Hybrid Artificial Fish Swarm Algorithm

NASA Astrophysics Data System (ADS)

Zheng, Genrang; Lin, ZhengChun

The problem of winner determination in combinatorial auctions is a hotspot electronic business, and a NP hard problem. A Hybrid Artificial Fish Swarm Algorithm(HAFSA), which is combined with First Suite Heuristic Algorithm (FSHA) and Artificial Fish Swarm Algorithm (AFSA), is proposed to solve the problem after probing it base on the theories of AFSA. Experiment results show that the HAFSA is a rapidly and efficient algorithm for The problem of winner determining. Compared with Ant colony Optimization Algorithm, it has a good performance with broad and prosperous application.

Assessment of Subyearling Chinook Salmon Survival through the Federal Hydropower Projects in the Main-Stem Columbia River

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skalski, J. R.; Eppard, M. B.; Ploskey, Gene R.

2014-07-11

High survival through hydropower projects is an essential element in the recovery of salmonid populations in the Columbia River. It is also a regulatory requirement under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) established under the Endangered Species Act. It requires dam passage survival to be ≥0.96 and ≥0.93 for spring and summer outmigrating juvenile salmonids, respectively, and estimated with a standard error ≤ 0.015. An innovative virtual/paired-release design was used to estimate dam passage survival, defined as survival from the face of a dam to the tailrace mixing zone. A coordinated four-dam study was conductedmore » during the 2012 summer outmigration using 14,026 run-of-river subyearling Chinook salmon surgically implanted with acoustic micro-transmitter (AMT) tags released at 9 different locations, and monitored on 14 different detection arrays. Each of the four estimates of dam passage survival exceeded BiOp requirements with values ranging from 0.9414 to 0.9747 and standard errors, 0.0031 to 0.0114. Two consecutive years of survival estimates must meet BiOp standards in order for a hydropower project to be in compliance with recovery requirements for a fish stock.« less

A vegetable oil feeding history affects digestibility and intestinal fatty acid uptake in juvenile rainbow trout Oncorhynchus mykiss.

PubMed

Geurden, Inge; Jutfelt, Fredrik; Olsen, Rolf-Erik; Sundell, Kristina S

2009-04-01

Future expansion of aquaculture relies on the use of alternatives to fish oil in fish feed. This study examined to what extent the nature of the feed oil affects intestinal lipid uptake properties in rainbow trout. The fish were fed a diet containing fish (FO), rapeseed (RO) or linseed (LO) oil for 8 weeks after which absorptive properties were assessed. Differences in digestibility due to feed oil history were measured using diet FO with an indigestible marker. Intestinal integrity, paracellular permeability, in vitro transepithelial fatty acid transport (3H-18:3n-3 and 14C-16:0) and their incorporation into intestinal epithelia were compared using Ussing chambers. Feed oil history did not affect the triacylglycerol/phosphatidylcholine ratio (TAG/PC) of the newly synthesized lipids in the segments. The lower TAG/PC ratio with 16:0 (2:1) than with 18:3 (10:1) showed the preferential incorporation of 16:0 into polar lipids. The FO-feeding history decreased permeability and increased transepithelial resistance of the intestinal segments. Transepithelial passage rates of 18:3n-3 were higher when pre-fed LO compared to RO or FO. Similarly, pre-feeding LO increased apparent lipid and fatty acid digestibilities compared to RO or FO. These results demonstrate that the absorptive intestinal functions in fish can be altered by the feed oil history and that the effect remains after a return to a standard fish oil diet.

Problems and constraints in Philippine municipal fisheries: The case of San Miguel Bay, Camarines Sur

NASA Astrophysics Data System (ADS)

Lim, Cristina P.; Matsuda, Yoshiaki; Shigemi, Yukio

1995-11-01

The Philippine fisheries accounted for 3.7% of the gross national product at current prices. The sector employed about 990,872 persons. Of the divisions comprising the industry, municipal fisheries continued to contribute the largest share of fish production. However, the sector is beset with problems, many of which are best examplified by the case of San Miguel Bay (SMB). This paper presents the problems and constraints confronting SMB, a common property resource. This bay's open access condition has led to various problems, such as declining fishery resources, depressed socioeconomic conditions, illegal fishing, increasing population, and conflict among resource users. A poor marketing system, low level of fishing technology, fishermen's noncompliance and authorities' lax enforcement of rules and regulations, as well as lack of alternative sources of income further characterize the condition in SMB. Establishment of fishing rights, improvement of the marketing system, provision of alternative sources of income, and improvement of fishing technology were some of the solutions suggested. One major constraint, however, is financial, Comanagement complemented with other management tools has been proposed in addressing the problems in SMB.

So You Need Action!

ERIC Educational Resources Information Center

Snyder, Sarah

A booklet for limited English speakers on dealing with consumer problems provides information on talking to businesses, getting someone on your side, going to the law, and stopping problems before they start. Cartoons, questions about the message in cartoons and narrative passages, checklists on things to consider, and the phonetic pronunciation…

Survival and migration behavior of juvenile salmonids at McNary Dam, 2004, Final report of research

USGS Publications Warehouse

Perry, Russell W.; Braatz, Amy C.; Fielding, Scott D.; Lucchesi, Joel N.; Plumb, John M.; Adams, Noah S.; Rondorf, Dennis W.

2005-01-01

During 2004, the USGS Columbia River Research Laboratory conducted a study at McNary Dam using radio telemetry to estimate passage and survival parameters of juvenile salmonids. Our primary objective was to estimate these parameters under ambient environmental and operational conditions, and thus project-wide treatments were not implemented. The primary dam operation consisted of “biop” spill, where spill occurred at night between 1800 and 0600 hours, and no spill occurred between 0600 and 1800 hours for the majority of our study period. During the spring study period, we radio-tagged and released 1,896 yearling Chinook salmon and 1,888 juvenile steelhead. During the summer study period, we radio-tagged and released 1,919 subyearling Chinook salmon. All fish were tagged using gastric techniques to implant transmitters weighing 1.58 g for yearling Chinook salmon, 1.93 g for juvenile steelhead, and 0.96 g for subyearling Chinook salmon. Minimum fish sizes were based on a 6.5% tag:fish weight ratio, and the size of tagged fish represented about 91%, 100%, and 17% of the population, respectively for yearling Chinook salmon, juvenile steelhead, and subyearling Chinook salmon. About 60% of radio-tagged fish were released 10 km upstream of McNary Dam at Hat Rock State Park, Oregon, with the remainder released as control groups 400 m downstream of the dam.

Fishery management problems and possibilities on large southeastern reservoirs

USGS Publications Warehouse

Parsons, John W.

1958-01-01

In recognition of these problems, the development and application of sound management procedures may be accomplished by controlling species composition and availability of fish through water level control, timber clearing, application of selective toxicants, commercial fishing, introduction of new fish species, and the management of tailwaters and tributaries. Extended research and interagency cooperation are necessary to properly develop and apply sound management. Promotion of angling and regulation of the fishery may best be realized by providing adequate fishing facilities, elimination of certain restricted areas, and in some cases revision of laws and regulations. Biologists must not only meet the present demands for improved sport fishing but must also balance fish yield by increasing the use of food fish by sport and commercial operations.

DEVELOPMENT OF THE PRIEST RAPIDS TURBINE UPGRADE PROJECT

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeBolt, Donald; Richmond, Marshall C.; Donelson, Richard K.

The Priest Rapids Dam is located on the Columbia River and is operated by Public Utility District No. 2 of Grant County, WA (GCPUD). In operation since 1959, GCPUD decided that a major upgrade was necessary. As with other hydroelectric facilities on the Columbia River, improving fish passage at Priest Rapids Dam is of great importance for salmon and steelhead populations in the Pacific Northwest. Consequently, GCPUD established the Priest Rapids Turbine Upgrade Project to extend the life of the units, increase efficiency and power production, and improve fish-passage. The Priest Rapids powerhouse is equipped with 10 vertical Kaplan turbinesmore » with runner diameters of 7.21 m operating under net heads varying from 18 m to 27 m. The scope of the project included a design competition involving three turbine manufacturers providing up to two designs for evaluation. Selection of the replacement design was determined by the lowest evaluated price based on model test results conducted at an independent laboratory (Ecole Polytechnique Federale de Lausanne in Lausanne Switzerland) and a biological performance score determined by a newly developed Biological Performance Assessment (BioPA) performed by Pacific Northwest National Laboratory in Richland, WA. In the paper, the hydraulic design challenges are reviewed, in addition to comparisons of designs evaluated during the competitive model test program and biological assessment. The paper also provides a description of the process followed by GCPUD, and how the evaluation criteria influenced the development and the finally selected solution.« less

Fisheries Enhancement on the Coeur d'Alene Indian Reservation; Hangman Creek, Annual Report 2001-2002.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peters, Ronald; Kinkead, Bruce; Stanger, Mark

2003-07-01

Historically, Hangman Creek produced Chinook salmon (Oncorhynchus tshawytscha) and Steelhead trout (Oncorhynchus mykiss) for the Upper Columbia Basin Tribes. One weir, located at the mouth of Hangman Creek was reported to catch 1,000 salmon a day for a period of 30 days a year (Scholz et al. 1985). The current town of Tekoa, Washington, near the state border with Idaho, was the location of one of the principle anadromous fisheries for the Coeur d'Alene Tribe (Scholz et al. 1985). The construction, in 1909, of Little Falls Dam, which was not equipped with a fish passage system, blocked anadromous fish accessmore » to the Hangman Watershed. The fisheries were further removed with the construction of Chief Joseph and Grand Coulee Dams. As a result, the Coeur d'Alene Indian Tribe was forced to rely more heavily on native fish stocks such as Redband trout (Oncorhynchus mykiss gairdneri), Westslope Cutthroat trout (O. clarki lewisii), Bull trout (Salvelinus confluentus) and other terrestrial wildlife. Historically, Redband and Cutthroat trout comprised a great deal of the Coeur d'Alene Tribe's diet (Power 1997).« less

Maximum Neutral Buoyancy Depth of Juvenile Chinook Salmon: Implications for Survival during Hydroturbine Passage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pflugrath, Brett D.; Brown, Richard S.; Carlson, Thomas J.

This study investigated the maximum depth at which juvenile Chinook salmon Oncorhynchus tshawytscha can acclimate by attaining neutral buoyancy. Depth of neutral buoyancy is dependent upon the volume of gas within the swim bladder, which greatly influences the occurrence of injuries to fish passing through hydroturbines. We used two methods to obtain maximum swim bladder volumes that were transformed into depth estimations - the increased excess mass test (IEMT) and the swim bladder rupture test (SBRT). In the IEMT, weights were surgically added to the fishes exterior, requiring the fish to increase swim bladder volume in order to remain neutrallymore » buoyant. SBRT entailed removing and artificially increasing swim bladder volume through decompression. From these tests, we estimate the maximum acclimation depth for juvenile Chinook salmon is a median of 6.7m (range = 4.6-11.6 m). These findings have important implications to survival estimates, studies using tags, hydropower operations, and survival of juvenile salmon that pass through large Kaplan turbines typical of those found within the Columbia and Snake River hydropower system.« less

ADD, LD and Extended Information Processing.

ERIC Educational Resources Information Center

Stolzenberg, J. B.; Cherkes-Julkowski, M.

This study examines executive function and its relationship to attention dysfunction and working memory. It attempts to document the manifestations of executive function problems in school-related extended processing tasks, such as verbal problem-solving in math and reading of extended passages. Subjects (in grades 1-12) included 49 children with…

A Passage in Time

ERIC Educational Resources Information Center

Language Teaching, 2014

2014-01-01

The translator's craft lies first in his command of an exceptionally large vocabulary as well as all syntactic resources--his ability to use them elegantly, flexibly, succinctly. All translation problems finally resolve themselves into problems of how to write well in the target language. Benjamin (1923) stated that in a good work, language…

Post-Release Performance of Natural and Hatchery Subyearling Fall Chinook Salmon in the Snake and Clearwater Rivers.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Connor, William P.

2008-04-01

In 2006, we continued a multi-year study to compare smolt-to-adult return rate (SAR) ratios between two groups of Snake River Basin fall Chinook salmon Oncorhynchus tshawytscha that reached the sea through a combination of either (1) transportation and inriver migration or (2) bypass and inriver migration. We captured natural subyearlings rearing along the Snake and Clearwater rivers and implanted them with passive integrated transponder (PIT) tags, but knew in advance that sample sizes of natural fish would not be large enough for precise comparisons of SAR ratios. To increase sample sizes, we also cultured Lyons Ferry Hatchery subyearlings under amore » surrogate rearing strategy, implanted them with PIT tags, and released them into the Snake and Clearwater rivers to migrate seaward. The surrogate rearing strategy involved slowing growth at Dworshak National Fish Hatchery to match natural subyearlings in size at release as closely as possible, while insuring that all of the surrogate subyearlings were large enough for tagging (i.e., 60-mm fork length). Surrogate subyearlings were released from late May to early July 2006 to coincide with the historical period of peak beach seine catch of natural parr in the Snake and Clearwater rivers. We also PIT tagged a large representative sample of hatchery subyearlings reared under a production rearing strategy and released them into the Snake and Clearwater rivers in 2006 as part of new research on dam passage experiences (i.e., transported from a dam, dam passage via bypass, dam passage via turbine intakes or spillways). The production rearing strategy involved accelerating growth at Lyons Ferry Hatchery, sometimes followed by a few weeks of acclimation at sites along the Snake and Clearwater rivers before release from May to June. Releasing production subyearlings has been suggested as a possible alternative for making inferences on the natural population if surrogate fish were not available. Smoltto-adult return rates are not reported here, but will be presented in future reports written after workshops and input by federal, state, and tribal researchers. In this report, we compared the postrelease performance of natural subyearlings to the postrelease performance of surrogate and production subyearlings. We made this comparison to help the fisheries community determine which of the two hatchery rearing strategies produced fish that were more similar to natural subyearlings. We compared the following attributes of postrelease performance (1) detection dates at dams, (2) detections during the implementation of summer spill, (3) travel times, (4) migrant sizes, and (5) the joint probability of migration and survival. Overall, we found that postrelease performance was more similar between natural and surrogate subyearlings than between natural and production subyearlings. Further, the similarity between natural and surrogate subyearlings was greater in 2006 than in 2005, partly as the result of changes in incubation and early rearing practices we recommended based on 2005 results.« less

Hungry Horse Mitigation; Flathead Lake, 2003-2004 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansen, Barry; Evarts, Les

2005-06-01

The Confederated Salish and Kootenai Tribes (CSKT) and Montana Fish Wildlife and Parks (MFWP) wrote the ''Fisheries Mitigation Plan for Losses Attributable to the Construction and Operation of Hungry Horse Dam'' in March 1991 to define the fisheries losses, mitigation alternatives and recommendations to protect, mitigate and enhance resident fish and aquatic habitat affected by Hungry Horse Dam. On November 12, 1991, the Northwest Power Planning Council (NPPC) approved the mitigation plan with minor modifications, called for a detailed implementation plan, and amended measures 903(h)(1) through (7). A long-term mitigation plan was submitted in August 1992, was approved by themore » Council in 1993, and the first contract for this project was signed on November 11, 1993. The problem this project addresses is the loss of habitat, both in quality and quantity, in the Flathead Lake and River basin resulting from the construction and operation of Hungry Horse Dam. The purpose of the project is to both implement mitigation measures and monitor the biological responses to those measures including those implemented by Project Numbers 9101903 and 9101904. Goals and objectives of the 1994 Fish and Wildlife Program (Section 10.1) addressed by this project are the rebuilding to sustainable levels weak, but recoverable, native populations injured by the hydropower system. The project mitigates the blockage of spawning runs by Hungry Horse Dam by restoring and even creating spawning habitats within direct drainages to Flathead Lake. The project also addresses the altered habitat within Flathead Lake resulting from species shifts and consequent dominance of new species that restricts the potential success of mitigation measures. Specific goals of this project are to create and restore habitat and quantitatively monitor changes in fish populations to verify the efficacy of our mitigation measures. The project consists of three components: monitoring, restoration and research. Monitoring, for example, includes a spring gillnetting series conducted annually in Flathead Lake and builds on an existing data set initiated in 1981. Monitoring of the experimental kokanee reintroduction was a primary activity of this project between 1992 and 1997. Lake trout, whose high densities have precluded successful mitigation of losses of other species in Flathead Lake, have been monitored since 1996 to measure several biological parameters. Results of this work have utility in determining the population status of this key predator in Flathead Lake. The project has also defined the baseline condition of the Flathead Lake fishery in 1992-1993 and has conducted annual lakewide surveys since 1998. The restoration component of the project has addressed several stream channel, riparian, and fish passage problems, and suppression of non-native fish. The research component of the project began in FY 2000 and measured trophic linkages between M. relicta and other species to assist in predicting the results of our efforts to suppress lake trout. Only Objective 1 in the workplan is funded entirely by Hungry Horse Mitigation funds. Additional funds are drawn from other sources to assist in completion of Objectives 2-8.« less

Hungry Horse Mitigation : Flathead Lake : Annual Progress Report 2007.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansen, Barry; Evarts, Les

2008-12-22

The Confederated Salish and Kootenai Tribes (CSKT) and Montana Fish Wildlife and Parks (MFWP) wrote the 'Fisheries Mitigation Plan for Losses Attributable to the Construction and Operation of Hungry Horse Dam' in March 1991 to define the fisheries losses, mitigation alternatives and recommendations to protect, mitigate and enhance resident fish and aquatic habitat affected by Hungry Horse Dam. On November 12, 1991, the Northwest Power Planning Council (NPPC) approved the mitigation plan with minor modifications, called for a detailed implementation plan, and amended measures 903(h)(1) through (7). A long-term mitigation plan was submitted in August 1992, was approved by themore » Council in 1993, and the first contract for this project was signed on November 11, 1993. The problem this project addresses is the loss of habitat, both in quality and quantity, in the Flathead Lake and River basin resulting from the construction and operation of Hungry Horse Dam. The purpose of the project is to both implement mitigation measures and monitor the biological responses to those measures including those implemented by Project Numbers 9101903 and 9101904. Goals and objectives of the 1994 Fish and Wildlife Program (Section 10.1) addressed by this project are the rebuilding to sustainable levels weak, but recoverable, native populations injured by the hydropower system. The project mitigates the blockage of spawning runs by Hungry Horse Dam by restoring and even creating spawning habitats within direct drainages to Flathead Lake. The project also addresses the altered habitat within Flathead Lake resulting from species shifts and consequent dominance of new species that restricts the potential success of mitigation measures. Specific goals of this project are to create and restore habitat and quantitatively monitor changes in fish populations to verify the efficacy of our mitigation measures. The project consists of three components: monitoring, restoration and research. Monitoring, for example, includes a spring gillnetting series conducted annually in Flathead Lake and builds on an existing data set initiated in 1981. Monitoring of the experimental kokanee reintroduction was a primary activity of this project between 1992 and 1997. Lake trout, whose high densities have precluded successful mitigation of losses of other species in Flathead Lake, have been monitored since 1996 to measure several biological parameters. Results of this work have utility in determining the population status of this key predator in Flathead Lake. The project has also defined the baseline condition of the Flathead Lake fishery in 1992-1993 and has conducted annual lakewide surveys since 1998. The restoration component of the project has addressed several stream channel, riparian, and fish passage problems, and suppression of non-native fish. The research component of the project began in FY 2000 and measured trophic linkages between M. relicta and other species to assist in predicting the results of our efforts to suppress lake trout. Only Work Element A in the Statement of Work is funded entirely by Hungry Horse Mitigation funds. Additional funds are drawn from other sources to assist in completion of all remaining Work Elements.« less

Hungry Horse Mitigation; Flathead Lake, 2004-2005 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansen, Barry; Evarts, Les

2006-06-01

The Confederated Salish and Kootenai Tribes (CSKT) and Montana Fish Wildlife and Parks (MFWP) wrote the ''Fisheries Mitigation Plan for Losses Attributable to the Construction and Operation of Hungry Horse Dam'' in March 1991 to define the fisheries losses, mitigation alternatives and recommendations to protect, mitigate and enhance resident fish and aquatic habitat affected by Hungry Horse Dam. On November 12, 1991, the Northwest Power Planning Council (NPPC) approved the mitigation plan with minor modifications, called for a detailed implementation plan, and amended measures 903(h)(1) through (7). A long-term mitigation plan was submitted in August 1992, was approved by themore » Council in 1993, and the first contract for this project was signed on November 11, 1993. The problem this project addresses is the loss of habitat, both in quality and quantity, in the Flathead Lake and River basin resulting from the construction and operation of Hungry Horse Dam. The purpose of the project is to both implement mitigation measures and monitor the biological responses to those measures including those implemented by Project Numbers 9101903 and 9101904. Goals and objectives of the 1994 Fish and Wildlife Program (Section 10.1) addressed by this project are the rebuilding to sustainable levels weak, but recoverable, native populations injured by the hydropower system. The project mitigates the blockage of spawning runs by Hungry Horse Dam by restoring and even creating spawning habitats within direct drainages to Flathead Lake. The project also addresses the altered habitat within Flathead Lake resulting from species shifts and consequent dominance of new species that restricts the potential success of mitigation measures. Specific goals of this project are to create and restore habitat and quantitatively monitor changes in fish populations to verify the efficacy of our mitigation measures. The project consists of three components: monitoring, restoration and research. Monitoring, for example, includes a spring gillnetting series conducted annually in Flathead Lake and builds on an existing data set initiated in 1981. Monitoring of the experimental kokanee reintroduction was a primary activity of this project between 1992 and 1997. Lake trout, whose high densities have precluded successful mitigation of losses of other species in Flathead Lake, have been monitored since 1996 to measure several biological parameters. Results of this work have utility in determining the population status of this key predator in Flathead Lake. The project has also defined the baseline condition of the Flathead Lake fishery in 1992-1993 and has conducted annual lakewide surveys since 1998. The restoration component of the project has addressed several stream channel, riparian, and fish passage problems, and suppression of non-native fish. The research component of the project began in FY 2000 and measured trophic linkages between M. relicta and other species to assist in predicting the results of our efforts to suppress lake trout. Only Work Element A in the Statement of Work is funded entirely by Hungry Horse Mitigation funds. Additional funds are drawn from other sources to assist in completion of all remaining Work Elements.« less

Hungry Horse Mitigation : Flathead Lake : Annual Progress Report 2008.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansen, Barry; Evarts, Les

2009-08-06

The Confederated Salish and Kootenai Tribes (CSKT) and Montana Fish Wildlife and Parks (MFWP) wrote the 'Fisheries Mitigation Plan for Losses Attributable to the Construction and Operation of Hungry Horse Dam' in March 1991 to define the fisheries losses, mitigation alternatives and recommendations to protect, mitigate and enhance resident fish and aquatic habitat affected by Hungry Horse Dam. On November 12, 1991, the Northwest Power Planning Council (NPPC) approved the mitigation plan with minor modifications, called for a detailed implementation plan, and amended measures 903(h)(1) through (7). A long-term mitigation plan was submitted in August 1992, was approved by themore » Council in 1993, and the first contract for this project was signed on November 11, 1993. The problem this project addresses is the loss of habitat, both in quality and quantity, in the Flathead Lake and River basin resulting from the construction and operation of Hungry Horse Dam. The purpose of the project is to both implement mitigation measures and monitor the biological responses to those measures including those implemented by Project Numbers 9101903 and 9101904. Goals and objectives of the 1994 Fish and Wildlife Program (Section 10.1) addressed by this project are the rebuilding to sustainable levels weak, but recoverable, native populations injured by the hydropower system. The project mitigates the blockage of spawning runs by Hungry Horse Dam by restoring and even creating spawning habitats within direct drainages to Flathead Lake. The project also addresses the altered habitat within Flathead Lake resulting from species shifts and consequent dominance of new species that restricts the potential success of mitigation measures. Specific goals of this project are to create and restore habitat and quantitatively monitor changes in fish populations to verify the efficacy of our mitigation measures. The project consists of three components: monitoring, restoration and research. Monitoring, for example, includes a spring gillnetting series conducted annually in Flathead Lake and builds on an existing data set initiated in 1981. Monitoring of the experimental kokanee reintroduction was a primary activity of this project between 1992 and 1997. Lake trout, whose high densities have precluded successful mitigation of losses of other species in Flathead Lake, have been monitored since 1996 to measure several biological parameters. Results of this work have utility in determining the population status of this key predator in Flathead Lake. The project has also defined the baseline condition of the Flathead Lake fishery in 1992-1993 and has conducted annual lakewide surveys since 1998. The restoration component of the project has addressed several stream channel, riparian, and fish passage problems, and suppression of non-native fish. The research component of the project began in FY 2000 and measured trophic linkages between M. relicta and other species to assist in predicting the results of our efforts to suppress lake trout. Only Work Element A in the Statement of Work is funded entirely by Hungry Horse Mitigation funds. Additional funds are drawn from other sources to assist in completion of all remaining Work Elements.« less

Establishment and characterization of two cell lines from bluefin trevally Caranx melampygus.

PubMed

Zhao, Zhengshan; Lu, Yuanan

2006-01-30

Bluefin trevally Caranx melampygus Cuvier is a popular game fish and highly valued sea food with potential importance for aquaculture. To help establish this marine animal as an important aquacultural species in Hawaii and the Pacific and develop in vitro cell culture systems for long-term management and control of potential viral diseases 2 cell lines were established from body muscle (bluefin trevally muscles, BTMS) and fins (bluefin trevally fins, BTF). Primary culture of these cells was conducted at 25 degrees C using L-15 medium supplemented with 20% fetal bovine serum and various antibiotics. These cells have been serially subcultured 37 to 41 times since their initiation in June 2002. Growth of the bluefin trevally cells was serum-dependent at the time of the experiments and their plating efficiencies ranged from 11 to 28.2%. Comparative analysis showed that these bluefin trevally cells grew equally well in the media L-15 (Leibovitz medium), RPMI 1640, M199 and MEM (minimum essential medium), which are commonly used for cell cultures derived from aquatic animals and mammalian species. Examination of the early passage cells stored at -196 degrees C revealed a large percent (nearly 98%) of cell viability following a 6 mo storage in liquid nitrogen. Karyotyping analysis indicated that these bluefin trevally derived cell lines remained diploid with a chromosome count of 48 at passage 7 and 12. These 2 cell lines shared a same pattern of viral susceptibility and they were sensitive to infectious hematopoietic necrosis virus (IHNV), infectious pancreatic necrosis (IPN), spring viremia carp virus (SVCV), viral hemorrhagic septicemia virus (VHSV), and snakehead rhabdovirus (SHRV) but refractory to channel catfish virus (CCV) infection. These newly established cell lines are currently being used to facilitate the diagnosis of viral disease affecting marine fish aquaculture in Hawaii, and will be available for future isolation and study of bluefin trevally fish viruses.

Computational Fluid Dynamics Modeling of the John Day Dam Tailrace

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rakowski, Cynthia L.; Perkins, William A.; Richmond, Marshall C.

US Army Corps of Engineers - Portland District required that a two-dimensional (2D) depth-averaged and a three-dimensional (3D) free-surface numerical models to be developed and validated for the John Day tailrace. These models were used to assess potential impact of a select group of structural and operational alternatives to tailrace flows aimed at improving fish survival at John Day Dam. The 2D model was used for the initial assessment of the alternatives in conjunction with a reduced-scale physical model of the John Day Project. A finer resolution 3D model was used to more accurately model the details of flow inmore » the stilling basin and near-project tailrace hydraulics. Three-dimensional model results were used as input to the Pacific Northwest National Laboratory particle tracking software, and particle paths and times to pass a downstream cross section were used to assess the relative differences in travel times resulting from project operations and structural scenarios for multiple total river flows. Streamlines and neutrally-buoyant particles were seeded in all turbine and spill bays with flows. For a Total River of 250 kcfs running with the Fish Passage Plan spill pattern and a spillwall, the mean residence times for all particles were little changed; however the tails of the distribution were truncated for both spillway and powerhouse release points, and, for the powerhouse releases, reduced the residence time for 75% of the particles to pass a downstream cross section from 45.5 minutes to 41.3 minutes. For a total river of 125 kcfs configured with the operations from the Fish Passage Plan for the temporary spillway weirs and for a proposed spillwall, the neutrally-buoyant particle tracking data showed that the river with a spillwall in place had the overall mean residence time increase; however, the residence time for 75% of the powerhouse-released particles to pass a downstream cross section was reduced from 102.4 min to 89 minutes.« less

Effect of low-head lock and dam structures on migration and spawning of American shad and striped bass in the Cape Fear River, North Carolina

USGS Publications Warehouse

Smith, Joseph A.; Hightower, Joseph E.

2012-01-01

Anadromous fish populations within the Cape Fear River, North Carolina, have declined substantially since the late 1800s. Three low-head lock-and-dam (LD) structures on the river (LD-1–3) contributed to this decline by limiting access to upstream spawning habitat. We used egg sampling and sonic telemetry to examine the effects of the LD structures on migration and spawning activity of American shad Alosa sapidissima and striped bassMorone saxatilis. Egg distribution and stage of development suggested that most of the American shad spawning took place downstream from the lowermost structure, LD-1. The predicted mean density of stage-1 American shad eggs at a water temperature of 21°C was 895 eggs/1,000 m3 (95% credible interval [CI] = 800–994) below LD-1; 147 eggs/1,000 m3 (95% CI = 103–197) below LD-2; and 32 eggs/1,000 m3 (95% CI = 17–49) below the uppermost structure, LD-3. The probability of capturing a stage-1 American shad egg was strongly dependent on water temperature and hour of egg collection. Transmitter detections for 20 sonic-tagged American shad and 20 striped bass in 2008 showed that for both species, the majority of fish moved upstream of LD-1; 35% of American shad and 25% of striped bass migrated upstream of LD-3. Based on passage rates at the three LD structures, American shad would be expected to be most abundant downstream of LD-1 and upstream of LD-3. For striped bass, the river section between LD-2 and LD-3 had the highest egg collections and highest predicted proportion of the run. In combination, these results demonstrate that the locking program provides some access to historical spawning habitat, although further improvements in fish passage could benefit both species.

An effective and robust method for tracking multiple fish in video image based on fish head detection.

PubMed

Qian, Zhi-Ming; Wang, Shuo Hong; Cheng, Xi En; Chen, Yan Qiu

2016-06-23

Fish tracking is an important step for video based analysis of fish behavior. Due to severe body deformation and mutual occlusion of multiple swimming fish, accurate and robust fish tracking from video image sequence is a highly challenging problem. The current tracking methods based on motion information are not accurate and robust enough to track the waving body and handle occlusion. In order to better overcome these problems, we propose a multiple fish tracking method based on fish head detection. The shape and gray scale characteristics of the fish image are employed to locate the fish head position. For each detected fish head, we utilize the gray distribution of the head region to estimate the fish head direction. Both the position and direction information from fish detection are then combined to build a cost function of fish swimming. Based on the cost function, global optimization method can be applied to associate the target between consecutive frames. Results show that our method can accurately detect the position and direction information of fish head, and has a good tracking performance for dozens of fish. The proposed method can successfully obtain the motion trajectories for dozens of fish so as to provide more precise data to accommodate systematic analysis of fish behavior.

Genes encoded within 8q24 on the amplicon of a large extrachromosomal element are selectively repressed during the terminal differentiation of HL-60 cells.

PubMed

Hirano, Tetsuo; Ike, Fumio; Murata, Takehide; Obata, Yuichi; Utiyama, Hiroyasu; Yokoyama, Kazunari K

2008-04-02

Human acute myeloblastic leukemia HL-60 cells become resistant to differentiation during long-term cultivation. After 150 passages, double minute chromosomes (dmins) found in early-passaged cells are replaced by large extrachromosomal elements (LEEs). In a DNA library derived from a purified fraction of LEEs, 12.6% (23/183) of clones were assigned to 8q24 and 9.2% (17/183) were assigned to 14q11 in the human genome. Fluorescence in situ hybridization (FISH) revealed a small aberrant chromosome, which had not been found in early-passaged cells, in addition to the purified LEEs. We determined that each LEE consisted of six discontinuous segments in a region that extended for 4.4Mb over the 8q24 locus. Five genes, namely, Myc (a proto-oncogene), NSMCE2 (for a SUMO ligase), CCDC26 (for a retinoic acid-dependent modulator of myeloid differentiation), TRIB1 (for a regulator of MAPK kinase) and LOC389637 (for a protein of unknown function), were encoded by the amplicon. Breaks in the chromosomal DNA within the amplicon were found in the NSMCE2 and CCDC26 genes. The discontinuous structure of the amplicon unit of the LEEs was identical with that of dmins in HL-60 early-passaged cells. The difference between them seemed, predominantly, to be the number (10-15 copies per LEE versus 2 or 3 copies per dmin) of constituent units. Expression of the Myc, NSMCE2, CCDC26 and LOC389637 and TRIB1 genes was constitutive in all lines of HL-60 cells and that of the first four genes was repressed during the terminal differentiation of early-passaged HL-60 cells. We also detected abnormal transcripts of CCDC26. Our results suggest that these genes were selected during the development of amplicons. They might be amplified and, sometimes, truncated to contribute to the maintenance of HL-60 cells in an undifferentiated state.

Automatically Detect and Track Multiple Fish Swimming in Shallow Water with Frequent Occlusion

PubMed Central

Qian, Zhi-Ming; Cheng, Xi En; Chen, Yan Qiu

2014-01-01

Due to its universality, swarm behavior in nature attracts much attention of scientists from many fields. Fish schools are examples of biological communities that demonstrate swarm behavior. The detection and tracking of fish in a school are of important significance for the quantitative research on swarm behavior. However, different from other biological communities, there are three problems in the detection and tracking of fish school, that is, variable appearances, complex motion and frequent occlusion. To solve these problems, we propose an effective method of fish detection and tracking. In this method, first, the fish head region is positioned through extremum detection and ellipse fitting; second, The Kalman filtering and feature matching are used to track the target in complex motion; finally, according to the feature information obtained by the detection and tracking, the tracking problems caused by frequent occlusion are processed through trajectory linking. We apply this method to track swimming fish school of different densities. The experimental results show that the proposed method is both accurate and reliable. PMID:25207811

Waste Load Allocation for Conservative Substances to Protect Aquatic Organisms

NASA Astrophysics Data System (ADS)

Hutcheson, M. R.

1992-01-01

A waste load allocation process is developed to determine the maximum effluent concentration of a conservative substance that will not harm fish and wildlife propagation. If this concentration is not exceeded in the effluent, the acute toxicity criterion will not be violated in the receiving stream, and the chronic criterion will not be exceeded in the zone of passage, defined in many state water quality standards to allow the movement of aquatic organisms past a discharge. Considerable simplification of the concentration equation, which is the heart of any waste load allocation, is achieved because it is based on the concentration in the receiving stream when the concentration gradient on the zone of passage boundary is zero. Consequently, the expression obtained for effluent concentration is independent of source location or stream morphology. Only five independent variables, which are routinely available to regulatory agencies, are required to perform this allocation. It aids in developing permit limits which are protective without being unduly restrictive or requiring large expenditures of money and manpower on field investigations.

Adapting to regional enforcement: fishing down the governance index.

PubMed

Osterblom, Henrik; Sumaila, U Rashid; Bodin, Orjan; Hentati Sundberg, Jonas; Press, Anthony J

2010-09-17

Illegal, Unreported and Unregulated (IUU) fishing is a problem for marine resource managers, leading to depletion of fish stocks and negative impacts on marine ecosystems. These problems are particularly evident in regions with weak governance. Countries responsible for sustainable natural resource management in the Southern Ocean have actively worked to reduce IUU fishing in the region over a period of 15 years, leading to a sequence of three distinct peaks of IUU fishing. We reviewed existing public records relating to IUU fishing in the Southern Ocean between 1995-2009 and related this information to the governance capacity of flag states responsible for IUU vessels. IUU operators used a number of methods to adapt to enforcement actions, resulting in reduced risks of detection, apprehension and sanctioning. They changed fishing locations, vessel names and flag states, and ports for offloading IUU catches. There was a significant decrease in the proportion of IUU vessels flagged to CCAMLR countries, and a significant decrease in the average governance index of flag states. Despite a decreasing trend of IUU fishing, further actions are hampered by the regional scope of CCAMLR and the governance capacity of responsible states. This is the first study of long-term change in the modus operandi of IUU fishing operators, illustrating that IUU operators can adapt to enforcement actions and that such dynamics may lead to new problems elsewhere, where countries have a limited capacity. This outsourcing of problems may have similarities to natural resource extraction in other sectors and in other regions. IUU fishing is the result of a number of factors, and effectively addressing this major challenge to sustainable marine resource extraction will likely require a stronger focus on governance. Highly mobile resource extractors with substantial funds are able to adapt to changing regulations by exploiting countries and regions with limited capacity.

Hungry Horse Mitigation; Flathead Lake, 2001-2002 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansen, Barry

2003-06-09

The Confederated Salish and Kootenai Tribes (CSKT) and Montana Fish Wildlife and Parks (MFWP) wrote ''Fisheries Mitigation Plan for Losses Attributable to the Construction and Operation of Hungry Horse Dam'' in March 1991 to define the fisheries losses, mitigation alternatives and recommendations to protect, mitigate and enhance resident fish and aquatic habitat affected by Hungry Horse Dam. On November 12, 1991, the Northwest Power Planning Council (NPPC) approved the mitigation plan with minor modifications, called for a detailed implementation plan, and amended measures 903(h)(1) through (7). A long-term mitigation plan was submitted in August 1992, was approved by the Councilmore » in 1993, and the first contract for this project was signed on November 11, 1993. The problem this project addresses is the loss of habitat, both in quality and quantity, in the interconnected Flathead Lake and River basin resulting from the construction and operation of Hungry Horse Dam. The purpose of the project is to both implement mitigation measures and monitor the biological responses to those measures including those implemented by Project Numbers 9101903 and 9101904. Goals and objectives of the 1994 Fish and Wildlife Program (Section 10.1) addressed by this project are the rebuilding to sustainable levels weak, but recoverable, native populations injured by the hydropower system. The project mitigates the blockage of spawning runs by Hungry Horse Dam by restoring and even creating spawning habitats within direct drainages to Flathead Lake. The project also addresses the altered habitat within Flathead Lake resulting from species shifts and consequent dominance of new species that restricts the potential success of mitigation measures. Specific goals of this project are to create and restore habitat and quantitatively monitor changes in fish populations to verify the efficacy of our mitigation measures. The project consists of three components: monitoring, restoration and research. Monitoring, for example, includes a spring gillnetting series conducted annually in Flathead Lake and builds on an existing data set initiated in 1981. Monitoring of the experimental kokanee reintroduction was a primary activity of this project between 1992 and 1997. Lake trout, whose high densities have precluded successful mitigation of losses of other species in Flathead Lake, have been monitored since 1996 to measure several biological parameters. Results of this work have utility in determining the population status of this key predator in Flathead Lake. The project has also defined the baseline condition of the Flathead Lake fishery in 1992-1993 and has conducted annual lakewide surveys since 1998. The restoration component of the project has addressed several stream channel, riparian, and fish passage problems. The research component of the project began in FY 2000 and measured trophic linkages between M. relicta and other species to assist in predicting the results of potential mitigation strategies. Only Objective 1 in the workplan is funded entirely by Hungry Horse Mitigation funds. Additional funds are drawn from other sources to assist in completion of Objectives 2-6.« less

Can species traits predict the susceptibility of riverine fish to water resource development? An Australian case study.

PubMed

Rolls, Robert J; Sternberg, David

2015-06-01

Water resource developments alter riverine environments by disrupting longitudinal connectivity, transforming lotic habitats, and modifying in-stream hydraulic conditions. Effective management of anthropogenic disturbances therefore requires an understanding of the range of potential ecosystem effects and the inherent traits symptomatic of elevated vulnerability to disturbance. Using 42 riverine fish native to South Eastern Australia as a case study, we quantified six morphological, behavioral, and life-history traits to classify species into groups reflecting potential differences in their response to ecosystem changes as a result of water resource development. Classification analysis identified five strategies based on fish life-history dispersal requirements, climbing potential, and habitat preference. These strategies in turn highlight the potential species at risk from the separate impacts of water resource development and inform management decisions to mitigate those risks. Swimming ability did not contribute to distinguishing species into functional groups, likely due to methodological inconsistencies in quantifying swimming performance that may ultimately hinder the ability of fish passage facilities to function within the physical capabilities of species at risk of habitat fragmentation. This study improves our ability to predict the performance of groups of species at risk from the multiple environmental changes imposed by humans and goes beyond broad-scale dispersal requirements as a predictor of individual species response.

Evaluation of the fish passage effectiveness of the Bonneville I prototype surface collector using three-dimensional ultrasonic fish tracking - Final Report

USGS Publications Warehouse

Faber, D.M; Weiland, M.A.; Moursund, R.A.; Carlson, T.J.; Adams, N.; Rondorf, D.

2001-01-01

This report describes tests conducted at Bonneville Dam on the Columbia River in the spring of 2000. The studies used three-dimensional (3D) acoustic telemetry and computational fluid dynamics (CFD) hydraulic modeling techniques to evaluate the response of outmigrating juvenile steelhead (Oncorhynchus mykiss) and yearling chinook (O. tshawytscha) to the Prototype Surface Collector (PSC) installed at Powerhouse I of Bonneville Dam in 1998 to test the concept of using a deep-slot surface bypass collector to divert downstream migrating salmon from turbines. The study was conducted by Pacific Northwest National Laboratory (PNNL), the Waterways Experiment Station of the U.S. Army Corp of Engineers (COE), Asci Corporation, and the U.S. Geological Survey (USGS), and was sponsored by COE’s Portland District. The goal of the study was to observe the three-dimensional behavior of tagged fish (fish bearing ultrasonic micro-transmitters) within 100 meters (m) of the surface flow bypass structure to test hypotheses about the response of migrants to flow stimuli generated by the presence of the surface flow bypass prototype and its operation. Research was done in parallel with radio telemetry studies conducted by USGS and hydroacoustic studies conducted by WES & Asci to evaluate the prototype surface collector.

Evaluation of strobe lights to reduce turbine entrainment of juvenile steelhead (Oncorhynchus mykiss) at Cowlitz Falls Dam, Washington

USGS Publications Warehouse

Kock, Tobias J.; Evans, Scott D.; Liedtke, Theresa L.; Rondorf, Dennis W.; Kohn, Mike

2009-01-01

We conducted a radiotelemetry evaluation to determine if strobe lights could be used to decrease turbine entrainment of juvenile steelhead (Oncorhynchus mykiss) at Cowlitz Falls Dam, Washington. We found that radio-tagged juvenile steelhead approached and entered two spillbays (one lighted, one unlighted) in equal proportions. However, the presence of strobe lights was associated with decreased spillbay residence time of juvenile steelhead and increased passage through induction slots (secondary turbine intakes located upstream of the ogee on the spillway). Mean residence time of tagged fish inside the lighted spillbay was 14 min compared to 62 min inside the unlighted spillbay. Radio-tagged steelhead passed through induction slots at a higher proportion in the lighted spillbay (55%) than in the unlighted spillbay (26%). Recent studies have suggested that strobe lights can induce torpor in juvenile salmonids. We believe that strobe light exposure affected fish in our study at a location where they were susceptible to high flows thereby reducing mean residence time and increasing the proportion of tagged fish entering induction slots in the lighted spillbay. Our results suggest that factors such as deployment location, exposure, and flow are important variables that should be considered when evaluating strobe lights as a potential fish-deterring management tool.

Scientifically defensible fish conservation and recovery plans: Addressing diffuse threats and developing rigorous adaptive management plans

USGS Publications Warehouse

Maas-Hebner, Kathleen G.; Schreck, Carl B.; Hughes, Robert M.; Yeakley, Alan; Molina, Nancy

2016-01-01

We discuss the importance of addressing diffuse threats to long-term species and habitat viability in fish conservation and recovery planning. In the Pacific Northwest, USA, salmonid management plans have typically focused on degraded freshwater habitat, dams, fish passage, harvest rates, and hatchery releases. However, such plans inadequately address threats related to human population and economic growth, intra- and interspecific competition, and changes in climate, ocean, and estuarine conditions. Based on reviews conducted on eight conservation and/or recovery plans, we found that though threats resulting from such changes are difficult to model and/or predict, they are especially important for wide-ranging diadromous species. Adaptive management is also a critical but often inadequately constructed component of those plans. Adaptive management should be designed to respond to evolving knowledge about the fish and their supporting ecosystems; if done properly, it should help improve conservation efforts by decreasing uncertainty regarding known and diffuse threats. We conclude with a general call for environmental managers and planners to reinvigorate the adaptive management process in future management plans, including more explicitly identifying critical uncertainties, implementing monitoring programs to reduce those uncertainties, and explicitly stating what management actions will occur when pre-identified trigger points are reached.

Evaluating the conservation potential of tributaries for native fishes in the Upper Colorado River Basin

USGS Publications Warehouse

Laub, Brian G.; Thiede, Gary P.; Macfarlane, William W.; Budy, Phaedra

2018-01-01

We explored the conservation potential of tributaries in the upper Colorado River basin by modeling native fish species richness as a function of river discharge, temperature, barrier‐free length, and distance to nearest free‐flowing main‐stem section. We investigated a historic period prior to large‐scale water development and a contemporary period. In the historic period, species richness was log‐linearly correlated to variables capturing flow magnitude, particularly mean annual discharge. In the contemporary period, the log‐linear relationship between discharge and species richness was still evident but weaker. Tributaries with lower average temperature and separated from free‐flowing main‐stem sections often had fewer native species compared to tributaries with similar discharge but with warmer temperature and directly connected to free‐flowing main stems. Thus, tributaries containing only a small proportion of main‐stem discharge, especially those at lower elevations with warmer temperatures and connected to free‐flowing main stems, can support a relatively high species richness. Tributaries can help maintain viable populations by providing ecological processes disrupted on large regulated rivers, such as natural flow and temperature regimes, and may present unique conservation opportunities. Efforts to improve fish passage, secure environmental flows, and restore habitat in these tributaries could greatly contribute to conservation of native fish richness throughout the watershed.

Using radar to advance migratory bird management: An interagency collaboration

USGS Publications Warehouse

Sojda, R.; Ruth, J.M.; Barrow, W.C.; Dawson, D.K.; Diehl, R.H.; Manville, A.; Green, M.T.; Krueper, D.J.; Johnston, S.

2005-01-01

Migratory birds face many changes to the landscapes they traverse and the habitats they use. Wind turbines and communications towers, which pose hazards to birds and bats in flight, are being erected across the United States and offshore. Human activities can also destroy or threaten habitats critical to birds during migratory passage, and climate change appears to be altering migratory patterns. The U.S. Fish and Wildlife Service (USFWS) and other agencies are under increasing pressure to identify and evaluate movement patterns and habitats used during migration and other times.

Multiplication of VHS virus in insect cells.

PubMed

Lorenzen, N; Olesen, N J

1995-01-01

Viral haemorrhagic septicaemia virus (VHSV) belongs to the rhabdovirus family and is a major pathogen in farmed rainbow trout. An insect cell culture traditionally used for production of recombinant proteins was found to be susceptible to VHS virus. At pH 6.2, VHSV multiplication induced formation of large syncytia similar to those obtained by baculovirus-induced expression of recombinant VHSV glycoprotein. The VHSV G protein produced in insect cells was smaller than G protein derived from fish cells. VHS virus produced in insect cells was still pathogenic to rainbow trout after 2 cell culture passages.

Watershed Restoration on Black Drake Ranch: Humility vs. hubris in applying incomplete scientific information to real world applications

NASA Astrophysics Data System (ADS)

Bulkley, G. B.; Mattenberger, S.

2009-12-01

Black Drake Ranch comprises ~1000 acres of Klamath Basin high desert in S. Central OR, containing 2.5m reaches each of the North Fork Sprague River (NFSR) and its major tributary, Five Mile Creek, a meandering meadow spring creek anchoring 26m of upstream habitat for several species of concern, including native redband trout. Decades of unenlightened management had resulted in substantial watershed degradation: channelization and diking by the U.S. Army Corps of Engineers (hubris), massive stream bank head cuts and erosion by cattle hooves, complete blockade of fish passage by two irrigation diversion dams, loss of eggs and fry in irrigation runoff, upland juniper overgrowth from fire suppression, and extensive infestation of noxious weeds. After in depth analysis by the Working Landscapes Alliance, Klamath Watershed Partnership, Oregon Dept. of Fish and Wildlife, and adjacent landowners, the landowner, a retired cellular biologist, collaborated with an United States Fish & Wildlife Service hydrologist to formulate a comprehensive Long Term Strategic Plan (LTSP) to restore a functioning ecosystem compatible with an economically viable cattle/hay ranching operation. The LTSP is based upon current best practices (CPBs) recommended by experts in relevant, but relatively young scientific fields, with the recognition that these CPBs are constantly evolving as new information becomes available, particularly relevant to this particular site. Consequently, the LTSP remains flexible, and is repeatedly revised as new information is culled from the literature, but mostly from on-site experience and errors. This LTSP entails: 1. Rotational cattle grazing and riparian fencing to allow the re-establishment of bank-stabilizing native plant populations; 2. At diversion dams, installation of fish screens and 3. re-establishment of fish passage using paleochannels revealed by aerial contour mapping; 4. Selective stream bank head cut repair to retain and thereby reduce irrigation water diversions; 5. Riparian planting of alders, willows, aspens and Ponderosa pines and 6. placement of instream large wood mass to provide cooling shade and refuge from predators; 7. Placement of spawning gravel; 8. Management of noxious weeds along stream banks; 9. Thinning of upland junipers to conserve surface water for runoff instream; and 10, Establishment of a formal program to monitor bank morphology and riparian plant populations (photomonitoring), water temperatures and fish census. After 4.5 years this LTSP has been ~80% implemented. Striking recovery of stream bank morphology and riparian plant species are seen, with ranching economics sustained. Changes in stream fish, invertebrate, and mammal populations will be evaluated as effects thereupon are anticipated. Perhaps most remarkable, this positive experience, and especially the open-minded flexibility of the project managers, has served to recruit traditionally resistant neighboring cattle ranchers to institute synergistic restoration programs along a contiguous 12m stretch of the NFSR. The key component of this project has been its substantial flexibility, based upon a realistic appreciation of the limits of current knowledge; ie: true Adaptive Management.

First passage properties of a generalized Pólya urn

NASA Astrophysics Data System (ADS)

Kearney, Michael J.; Martin, Richard J.

2016-12-01

A generalized two-component Pólya urn process, parameterized by a variable α , is studied in terms of the likelihood that due to fluctuations the initially smaller population in a scenario of competing population growth eventually becomes the larger, or is the larger after a certain passage of time. By casting the problem as an inhomogeneous directed random walk we quantify this role-reversal phenomenon through the first passage probability that equality in size is first reached at a given time, and the related exit probability that equality in size is reached no later than a given time. Using an embedding technique, exact results are obtained which complement existing results and provide new insights into behavioural changes (akin to phase transitions) which occur at defined values of α .

Implications of American Indian gambling for social work research and practice.

PubMed

Momper, Sandra L

2010-04-01

Since the 1988 passage of the Indian Gaming and Regulatory Act (IGRA), American Indian tribal communities have rapidly opened up casinos. American Indian participation in recreational gambling has increased, resulting in an increase in problem and pathological gambling. However, increased revenues from gaming have significantly benefited tribes. Background information on the Supreme Court case that led to passage of the IGRA and subsequently the opening of casinos on Indian reservations is provided. Data are presented on American Indian gambling studies that explore the impact of gambling on the development of problem or pathological gambling among American Indians. Reports and data are presented on the effects of gambling on the socioeconomic development of tribal communities. The implications of American Indian gaming for social work research and practice are discussed.

Effects of religion, economics, and geography on genetic structure of Fogo Island, Newfoundland.

PubMed

Crawford, M H; Koertevlyessy, T; Huntsman, R G; Collins, M; Duggirala, R; Martin, L; Keeping, D

1995-01-01

The population structure of Fogo Island, Newfoundland is described using geography, religious affiliation, economic factors (such as the presence of a fish-packing plant), and genetic markers. Five different analytic methods, R-matrix analysis, r ii VS. mean per locus heterozygosity, predicted kinship (ϕ), mean first passage time, and Mantel matrix comparisons, were applied to the Fogo Island genetic and demographic data. The results suggest that geography plays a role on Fogo Island in the distribution of genes, while religion, ethnicity, and economic factors play less significant roles. The communities with fish-packing plants and tourism serve as migratory "sinks" for Fogo islanders seeking employment. Reproductively, the most isolated village on Fogo Island is Tilting, and this is reflected in its genetic uniqueness, initially caused by Irish settlement and subsequently the action of stochastic processes. © 1995 Wiley-Liss, Inc. Copyright © 1995 Wiley-Liss, Inc., A Wiley Company.

A monogamous pipefish has the same type of ovary as observed in monogamous seahorses.

PubMed

Sogabe, Atsushi; Matsumoto, Koji; Ohashi, Mizuki; Watanabe, Aki; Takata, Hiromi; Murakami, Yasunori; Omori, Koji; Yanagisawa, Yasunobu

2008-08-23

Syngnathid fish (pipefish and seahorses) are unique among teleost fish in that their ovary consists of a rolled sheet with germinal ridge(s) on the dorsal side running along the entire length of the sheet. A distinct difference is seen in the ovarian structure between polygamous Syngnathus pipefish and monogamous seahorses (Hippocampus spp.), the former having one germinal ridge and the latter with two ridges. This study examined the ovarian structure and the mode of egg production in a monogamous pipefish Corythoichthys haematopterus. The ovary of C. haematopterus had two germinal ridges like that observed in monogamous seahorses. There were two distinct groups of follicles in the ovary, one being a cohort of extremely small follicles and the other a cohort of follicles developing and increasing in size with the passage of time. We suggest that the ovarian structure and the mode of egg production in this pipefish are adaptations to monogamy.

DOE Office of Scientific and Technical Information (OSTI.GOV)

McCormick, F.

A method for containment and deflection of inorganic and organic aqueous surface pollutants, such as an oil slick, flotsam, debris, and jellyfish, and an apparatus for the operation of such method are described. This method comprises the generation of an air or bubble barrier which permits the passage of surface vessels and large fish, but halts the movement of floating surface pollutants by the creation of a flexible continuous band of surface turbulence. The system in one specific application is designed to protect harbor and beach areas and fishing grounds from contamination with oil from oil tankers and also actsmore » as an air wall to keep harmful jellyfish from beach areas. The system can also be employed to recover oil from sunken or leaking tankers at sea by containment and collection of the oil released within the circumference of the bubble barrier wall created in a geometric pattern about the location of the stricken vessel. (10 claims)« less

Potential Effects of Dams on Migratory Fish in the Mekong River: Lessons from Salmon in the Fraser and Columbia Rivers

NASA Astrophysics Data System (ADS)

Ferguson, John W.; Healey, Michael; Dugan, Patrick; Barlow, Chris

2011-01-01

We compared the effects of water resource development on migratory fish in two North American rivers using a descriptive approach based on four high-level indicators: (1) trends in abundance of Pacific salmon, (2) reliance on artificial production to maintain fisheries, (3) proportion of adult salmon that are wild- versus hatchery-origin, and (4) number of salmon populations needing federal protection to avoid extinction. The two rivers had similar biological and physical features but radically different levels of water resource development: the Fraser River has few dams and all are located in tributaries, whereas the Columbia River has more than 130 large mainstem and tributary dams. Not surprisingly, we found substantial effects of development on salmon in the Columbia River. We related the results to potential effects on migratory fish in the Mekong River where nearly 200 mainstem and tributary dams are installed, under construction, or planned and could have profound effects on its 135 migratory fish species. Impacts will vary with dam location due to differential fish production within the basin, with overall effects likely being greatest from 11 proposed mainstem dams. Minimizing impacts will require decades to design specialized fish passage facilities, dam operations, and artificial production, and is complicated by the Mekong's high diversity and productivity. Prompt action is needed by governments and fisheries managers to plan Mekong water resource development wisely to prevent impacts to the world's most productive inland fisheries, and food security and employment opportunities for millions of people in the region.

Movements by adult cutthroat trout in a lotic system: Implications for watershed-scale management

USGS Publications Warehouse

Sanderson, T.B.; Hubert, W.A.

2009-01-01

Movements by adult cutthroat trout, Oncorhynchus clarkii (Richardson), were assessed from autumn to summer in the Salt River watershed, Wyoming-Idaho, USA by radio telemetry. Adult cutthroat trout were captured during September and October 2005 in the main stem of the Salt River, surgically implanted with radio transmitters, and tracked through to August 2006. Adult cutthroat trout were relatively sedentary and resided primarily in pools from October to March, but their movement rates increased during April. Higher movement rates were observed among tagged fish during May and early June. Among 43 fish residing in the Salt River during April 2006, 44% remained in the river, 37% moved into mountain tributaries and 19% moved into spring streams during the spawning season. Fish did not use segments of mountain tributaries or the upstream Salt River where fish passage was blocked by anthropogenic barriers or the channel was dewatered during summer. Almost all the fish that moved into spring streams used spring streams where pools and gravel-cobble riffles had been constructed by landowners. The results suggest that adult Snake River cutthroat move widely during May and early June to use spawning habitat in mountain tributaries and improved spring streams. Maintaining the ability of adult fish to move into mountain streams with spawning habitat, preserving spawning habitat in accessible mountain tributaries and removing barriers to upstream movements, and re-establishing summer stream flows in mountain tributaries affected by dams appear to be habitat management alternatives to preserve the Snake River cutthroat trout fishery in the Salt River. ?? 2009 Blackwell Publishing Ltd.