Introducing non-flooded crops in rice-dominated landscapes: Impact on carbon, nitrogen and water budgets

NASA Astrophysics Data System (ADS)

Jauker, Frank; Wassmann, Reiner; Amelung, Wulf; Breuer, Lutz; Butterbach-Bahl, Klaus; Conrad, Ralf; Ekschmitt, Klemens; Goldbach, Heiner; He, Yao; John, Katharina; Kiese, Ralf; Kraus, David; Reinhold-Hurek, Barbara; Siemens, Jan; Weller, Sebastian; Wolters, Volkmar

2013-04-01

Rice production consumes about 30% of all freshwater used worldwide and 45% in Asia. Turning away from permanently flooded rice cropping systems for mitigating future water scarcity and reducing methane emissions, however, will alter a variety of ecosystem services with potential adverse effects to both the environment and agricultural production. Moreover, implementing systems that alternate between flooded and non-flooded crops increases the risk of disruptive effects. The multi-disciplinary DFG research unit ICON aims at exploring and quantifying the ecological consequences of altered water regimes (flooded vs. non-flooded), crop diversification (irrigated rice vs. aerobic rice vs. maize), and different fertilization strategies (conventional, site-specific, and zero N fertilization). ICON particularly focuses on the biogeochemical cycling of carbon and nitrogen, green-house gas (GHG) emissions, water balance, soil biotic processes and other important ecosystem services. The overarching goal is to provide the basic process understanding that is necessary for balancing the revenues and environmental impacts of high-yield rice cropping systems while maintaining their vital ecosystem services. To this aim, a large-scale field experiment has been established at the experimental farm of the International Rice Research Institute (IRRI, Philippines). Ultimately, the experimental results are analyzed in the context of management scenarios by an integrated modeling of crop development (ORYZA), carbon and nitrogen cycling (MoBiLE-DNDC), and water fluxes (CMF), providing the basis for developing pathways to a conversion of rice-based systems towards higher yield potentials under minimized environmental impacts. In our presentation, we demonstrate the set-up of the controlled large-scale field experiment for simultaneous assessment of carbon and nitrogen fluxes and water budgets. We show and discuss first results for: - Quantification and assessment of the net-fluxes of CH4, N2O and CO2 from rice-rice and rice-maize rotations. The conversion of flooded to non-flooded cropping systems resulted in pollution swapping of greenhouse gas emissions, shifting from CH4 under wet conditions to N2O under dry conditions. - Quantification and assessment of water budgets and nutrient loss in rice-rice and rice-maize rotations. Switching from rice-rice dominated growing systems to upland rice or maize-rice cropping systems resulted in reduced water use efficiency and increased nitrogen loss. - Quantification and assessment of soil functions affected by soil fauna community structure in flooded and non-flooded cropping rotations. In contrast to temperate soils, earthworms reduced the peaks of microbial C and N decomposition depending on soil water content.

Invertebrate mercury bioaccumulation in permanent, seasonal, and flooded rice wetlands within California's Central Valley

USGS Publications Warehouse

Ackerman, Joshua T.; Miles, A. Keith; Eagles-Smith, Collin A.

2010-01-01

We examined methylmercury (MeHg) bioavailability in four of the most predominant wetland habitats in California's Central Valley agricultural region during the spring and summer: white rice, wild rice, permanent wetlands, and shallowly-flooded fallow fields. We sampled MeHg and total mercury (THg) concentrations in two aquatic macroinvertebrate taxa at the inlets, centers, and outlets of four replicated wetland habitats (8 wetlands total) during two time periods bounding the rice growing season and corresponding to flood-up and pre-harvest (96 total samples). In general, THg concentrations (mean ± standard error) in Notonectidae (Notonecta, back swimmers; 1.18 ± 0.08 µg g− 1 dry weight [dw]) were higher than in Corixidae (Corisella, water boatmen; 0.89 ± 0.06 µg g− 1 dw, MeHg: 0.74 ± 0.05 µg g− 1 dw). MeHg concentrations were correlated with THg concentrations in Corixidae (R2 = 0.80) and 88% of THg was in the MeHg form. Wetland habitat type had an important influence on THg concentrations in aquatic invertebrates, but this effect depended on the sampling time period and taxa. In particular, THg concentrations in Notonectidae, but not Corixidae, were higher in permanent wetlands than in white rice, wild rice, or shallowly-flooded fallow fields. THg concentrations in Notonectidae were higher at the end of the rice growing season than near the time of flood-up, whereas THg concentrations in Corixidae did not differ between time periods. The effect of wetland habitat type was more prevalent near the end of the rice growing season, when Notonectidae THg concentrations were highest in permanent wetlands. Additionally, invertebrate THg concentrations were higher at water outlets than at inlets of wetlands. Our results indicate that although invertebrate THg concentrations increased from the time of flood-up to draw-down of wetlands, temporarily flooded habitats such as white rice, wild rice, and shallowly-flooded fallow fields did not have higher THg or MeHg concentrations in invertebrates than permanent wetlands.

Genetics, Physiological Mechanisms and Breeding of Flood-Tolerant Rice (Oryza sativa L.).

PubMed

Singh, Anuradha; Septiningsih, Endang M; Balyan, Harendra S; Singh, Nagendra K; Rai, Vandna

2017-02-01

Flooding of rice fields is a serious problem in the river basins of South and South-East Asia where about 15 Mha of lowland rice cultivation is regularly affected. Flooding creates hypoxic conditions resulting in poor germination and seedling establishment. Flash flooding, where rice plants are completely submerged for 10-15 d during their vegetative stage, causes huge losses. Water stagnation for weeks to months also leads to substantial yield losses when large parts of rice aerial tissues are inundated. The low-yielding traditional varieties and landraces of rice adapted to these flooding conditions have been replaced by flood-sensitive high-yielding rice varieties. The 'FR13A' rice variety and the Submergence 1A (SUB1A) gene were identified for flash flooding and subsequently introgressed to high-yielding rice varieties. The challenge is to find superior alleles of the SUB1A gene, or even new genes that may confer greater tolerance to submergence. Similarly, genes have been identified in tolerant landraces of rice for their ability to survive by rapid stem elongation (SNORKEL1 and SNORKEL2) during deep-water flooding, and for anaerobic germination ability (TPP7). Research on rice genotypes and novel genes that are tolerant to prolonged water stagnation is in progress. These studies will greatly assist in devising more efficient and precise molecular breeding strategies for developing climate-resilient high-yielding rice varieties for flood-prone regions. Here we review the state of our knowledge of flooding tolerance in rice and its application in varietal improvement. © The Author 2017. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Alternate wetting and drying decreases methylmercury in flooded rice (Oryza sativa) systems

USGS Publications Warehouse

Tanner, K. Christy; Windham-Myers, Lisamarie; Marvin-DiPasquale, Mark C.; Fleck, Jacob; Linquist, Bruce A.

2018-01-01

In flooded soils, including those found in rice (Oryza sativa L.) fields, microbes convert inorganic Hg to more toxic methylmercury (MeHg). Methylmercury is accumulated in rice grain, potentially affecting health. Methylmercury in rice field surface water can bioaccumulate in wildlife. We evaluated how introducing aerobic periods into an otherwise continuously flooded rice growing season affects MeHg dynamics. Conventional continuously flooded (CF) rice field water management was compared with alternate wetting and drying, where irrigation was stopped twice during the growing season, allowing soil to dry to 35% volumetric moisture content, at which point plots were reflooded (AWD-35). Methylmercury studies began at harvest in Year 3 and throughout Year 4 of a 4-yr replicated field experiment. Bulk soil, water, and plant samples were analyzed for MeHg and total Hg (THg), and iron (Fe) speciation was measured in soil samples. Rice grain yield over 4 yr did not differ between treatments. Soil chemistry responded quickly to AWD-35 dry-downs, showing significant oxidation of Fe(II) accompanied by a significant reduction of MeHg concentration (76% reduction at harvest) compared with CF. Surface water MeHg decreased by 68 and 39% in the growing and fallow seasons, respectively, suggesting that the effects of AWD-35 management can last through to the fallow season. The AWD-35 treatment reduced rice grain MeHg and THg by 60 and 32%, respectively. These results suggest that the more aerobic conditions caused by AWD-35 limited the activity of Hg(II)-methylating microbes and may be an effective way to reduce MeHg concentrations in rice ecosystems.

Influence of water management and fertilizer application on (137)Cs and (133)Cs uptake in paddy rice fields.

PubMed

Wakabayashi, Shokichi; Itoh, Sumio; Kihou, Nobuharu; Matsunami, Hisaya; Hachinohe, Mayumi; Hamamatsu, Shioka; Takahashi, Shigeru

2016-06-01

Cesium-137 derived from the Tokyo Electric Power Company's Fukushima Dai-ichi Nuclear Power Plant (FDNPP) accident contaminated large areas of agricultural land in Eastern Japan. Previous studies before the accident have indicated that flooding enhances radiocesium uptake in rice fields. We investigated the influence of water management in combination with fertilizers on (137)Cs concentrations in rice plants at two fields in southern Ibaraki Prefecture. Stable Cs ((133)Cs) in the plants was also determined as an analogue for predicting (137)Cs behavior after long-term aging of soil (137)Cs. The experimental periods comprised 3 y starting from 2012 in one field, and 2 y from 2013 in another field. These fields were divided into three water management sections: a long-flooding section without midsummer drainage, and medial-flooding, and short-flooding sections with one- or two-week midsummer drainage and earlier end of flooding than the long-flooding section. Six or four types of fertilizer subsections (most differing only in potassium application) were nested in each water management section. Generally, the long-flooding treatment led to higher (137)Cs and (133)Cs concentrations in both straw and brown rice than medial- and short-flooding treatments, although there were some notable exceptions in the first experimental year at each site. Effects of differing potassium fertilizer treatments were cumulative; the effects on (137)Cs and (133)Cs concentrations in rice plants were not obvious in 2012 and 2013, but in 2014, these concentrations were highest where potassium fertilizer had been absent and lowest where basal dressings of K had been tripled. The relationship between (137)Cs and (133)Cs in rice plants was not correlative in the first experimental year at each site, but correlation became evident in the subsequent year(s). This study demonstrates a novel finding that omitting midsummer drainage and/or delaying drainage during the grain-filling period enhances uptake of both (137)Cs and (133)Cs. Copyright © 2016 Elsevier Ltd. All rights reserved.

Effects of water-saving irrigation on the residues and risk of polycyclic aromatic hydrocarbon in paddy field.

PubMed

Zhao, Zhenhua; Xia, Liling; Jiang, Xin; Gao, Yanzheng

2018-03-15

The effects of different water-saving modes on PAHs residue and risk, field environment conditions and enzyme activities in paddy field were investigated in a field experiment plot in Laoyaba, Nanjing, China. Results showed that (1) water-saving treatment affected greatly the ΣPAHs in water and soil. The order of ΣPAHs residue in surface water and groundwater in farmland is as follows: dry fieldsroot>stem>rice grain. (4) Water-saving irrigation evidently decreased soil ecological risk (up to 55%-73%) and rice carcinogenic risk (up to 30%-45%) caused by PAHs compared with flooding irrigation. Water-saving irrigation could also reduce the Total Toxic Equivalency Concentration of PAHs in rice grain up to 50% relative to flooding irrigation. (5) The significant negative correlations were observed between the residual PAHs and the activities of laccase and dioxygenase (p<0.019), and the physical and chemical indexes (temperature, redox potential and dissolved oxygen of field, p<0.041). The changes of field environment conditions and enzyme activities induced by moisture control may be the main key factors affecting PAHs residue in water, soil and rice. Copyright © 2017. Published by Elsevier B.V.

Mapping paddy rice planting areas through time series analysis of MODIS land surface temperature and vegetation index data

PubMed Central

Zhang, Geli; Xiao, Xiangming; Dong, Jinwei; Kou, Weili; Jin, Cui; Qin, Yuanwei; Zhou, Yuting; Wang, Jie; Menarguez, Michael Angelo; Biradar, Chandrashekhar

2016-01-01

Knowledge of the area and spatial distribution of paddy rice is important for assessment of food security, management of water resources, and estimation of greenhouse gas (methane) emissions. Paddy rice agriculture has expanded rapidly in northeastern China in the last decade, but there are no updated maps of paddy rice fields in the region. Existing algorithms for identifying paddy rice fields are based on the unique physical features of paddy rice during the flooding and transplanting phases and use vegetation indices that are sensitive to the dynamics of the canopy and surface water content. However, the flooding phenomena in high latitude area could also be from spring snowmelt flooding. We used land surface temperature (LST) data from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor to determine the temporal window of flooding and rice transplantation over a year to improve the existing phenology-based approach. Other land cover types (e.g., evergreen vegetation, permanent water bodies, and sparse vegetation) with potential influences on paddy rice identification were removed (masked out) due to their different temporal profiles. The accuracy assessment using high-resolution images showed that the resultant MODIS-derived paddy rice map of northeastern China in 2010 had a high accuracy (producer and user accuracies of 92% and 96%, respectively). The MODIS-based map also had a comparable accuracy to the 2010 Landsat-based National Land Cover Dataset (NLCD) of China in terms of both area and spatial pattern. This study demonstrated that our improved algorithm by using both thermal and optical MODIS data, provides a robust, simple and automated approach to identify and map paddy rice fields in temperate and cold temperate zones, the northern frontier of rice planting. PMID:27667901

Mapping paddy rice planting areas through time series analysis of MODIS land surface temperature and vegetation index data.

PubMed

Zhang, Geli; Xiao, Xiangming; Dong, Jinwei; Kou, Weili; Jin, Cui; Qin, Yuanwei; Zhou, Yuting; Wang, Jie; Menarguez, Michael Angelo; Biradar, Chandrashekhar

2015-08-01

Knowledge of the area and spatial distribution of paddy rice is important for assessment of food security, management of water resources, and estimation of greenhouse gas (methane) emissions. Paddy rice agriculture has expanded rapidly in northeastern China in the last decade, but there are no updated maps of paddy rice fields in the region. Existing algorithms for identifying paddy rice fields are based on the unique physical features of paddy rice during the flooding and transplanting phases and use vegetation indices that are sensitive to the dynamics of the canopy and surface water content. However, the flooding phenomena in high latitude area could also be from spring snowmelt flooding. We used land surface temperature (LST) data from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor to determine the temporal window of flooding and rice transplantation over a year to improve the existing phenology-based approach. Other land cover types (e.g., evergreen vegetation, permanent water bodies, and sparse vegetation) with potential influences on paddy rice identification were removed (masked out) due to their different temporal profiles. The accuracy assessment using high-resolution images showed that the resultant MODIS-derived paddy rice map of northeastern China in 2010 had a high accuracy (producer and user accuracies of 92% and 96%, respectively). The MODIS-based map also had a comparable accuracy to the 2010 Landsat-based National Land Cover Dataset (NLCD) of China in terms of both area and spatial pattern. This study demonstrated that our improved algorithm by using both thermal and optical MODIS data, provides a robust, simple and automated approach to identify and map paddy rice fields in temperate and cold temperate zones, the northern frontier of rice planting.

Avian foods, foraging and habitat conservation in world rice fields

USGS Publications Warehouse

Stafford, J.D.; Kaminski, R.M.; Reinecke, K.J.

2010-01-01

Worldwide, rice (Oryza sativa) agriculture typically involves seasonal flooding and soil tillage, which provides a variety of microhabitats and potential food for birds. Water management in rice fields creates conditions ranging from saturated mud flats to shallow (<30 cm) water, thereby attracting different guilds of birds. Grain not collected during harvest (i.e. waste rice) is typically the most abundant potential food of birds in rice fields, with estimates of seed mass from North America ranging from 66672 kg/ha. Although initially abundant after harvest, waste rice availability can be temporally limited. Few abundance estimates for other foods, such as vertebrate prey or forage vegetation, exist for rice fields. Outside North America, Europe and Japan, little is known about abundance and importance of any avian food in rice fields. Currently, flooding rice fields after harvest is the best known management practice to attract and benefit birds. Studies from North America indicate specific agricultural practices (e.g. burning stubble) may increase use and improve access to food resources. Evaluating and implementing management practices that are ecologically sustainable, increase food for birds and are agronomically beneficial should be global priorities to integrate rice production and avian conservation. Finally, land area devoted to rice agriculture appears to be stable in the USA, declining in China, and largely unquantified in many regions. Monitoring trends in riceland area may provide information to guide avian conservation planning in rice-agriculture ecosystems.

Carbon Dioxide Flux from Rice Paddy Soils in Central China: Effects of Intermittent Flooding and Draining Cycles

PubMed Central

Liu, Yi; Wan, Kai-yuan; Tao, Yong; Li, Zhi-guo; Zhang, Guo-shi; Li, Shuang-lai; Chen, Fang

2013-01-01

A field experiment was conducted to (i) examine the diurnal and seasonal soil carbon dioxide (CO2) fluxes pattern in rice paddy fields in central China and (ii) assess the role of floodwater in controlling the emissions of CO2 from soil and floodwater in intermittently draining rice paddy soil. The soil CO2 flux rates ranged from −0.45 to 8.62 µmol.m−2.s−1 during the rice-growing season. The net effluxes of CO2 from the paddy soil were lower when the paddy was flooded than when it was drained. The CO2 emissions for the drained conditions showed distinct diurnal variation with a maximum efflux observed in the afternoon. When the paddy was flooded, daytime soil CO2 fluxes reversed with a peak negative efflux just after midday. In draining/flooding alternating periods, a sudden pulse-like event of rapidly increasing CO2 efflux occured in response to re-flooding after draining. Correlation analysis showed a negative relation between soil CO2 flux and temperature under flooded conditions, but a positive relation was found under drained conditions. The results showed that draining and flooding cycles play a vital role in controlling CO2 emissions from paddy soils. PMID:23437170

Seasonal variation of carbon dioxide and methane exchange between rice paddy fields and atmosphere in Japan

NASA Astrophysics Data System (ADS)

Kokubo, R.

2017-12-01

Rice paddy fields spread throughout Asia and play an important role in terms of regulating greenhouse gases on the ground. Rice paddies have the potential to either increase or decrease the net balance of greenhouse gases in the atmosphere. In the rice growth period, rice paddy fields are sources of CH4, whereas they generally act as a sink of CO2. However, the behavior of greenhouse gases during fallow periods has not been well understood. A field experiment was conducted at a rice paddy field in Fuchu, central Japan in 2014. We evaluated CO2 and CH4 fluxes in the rice paddy field using the eddy covariance method. Except for 20 days after transplanting (DAT), temporal CO2 fluxes showed negative values during a rice growth period whereas they showed positive values throughout a fallow period. The positive CO2 fluxes at 2 emissions by respiration of rice plants and soil microorganisms than CO2 uptake by photosynthesis of rice plants. In the middle of the growing season at around DAT=50, CO2 emission became dominant again because flooded water was temporarily drained in the rice paddy field. Seasonal CH4 fluxes during a growth period were regulated by water management and plant growth stages. During a fallow period, however, the field was kept a non-flooded condition that resulted in an aerobic soil condition and thus very low CH4 emission.

Agronomie implications of waterfowl management in Mississippi ricefields

USGS Publications Warehouse

Manley, S.W.; Kaminski, R.M.; Reinecke, K.J.; Gerard, P.D.

2005-01-01

Ricefields are important foraging habitat for waterfowl and other waterbirds in several North American wintering areas, including the Mississippi Alluvial Valley (MAV). Rice growers are likely to adopt management practices that provide habitat for waterfowl if agronomic benefits also occur. Therefore, we conducted a replicated field experiment during autumn through spring 1995-1997 to study effects of postharvest field treatment and winter-water management on agronomic variables including biomass of residual rice straw, cool-season grasses and forbs (i.e., winter weeds), and viability of red rice (Oryza sativa var.). The treatment combination of postharvest disking and flooding until early March reduced straw 68%, from 9,938 kg/ha after harvest to 3,209 kg/ha in spring. Treatment combinations that included flooding until early March were most effective in suppressing winter weeds and decreased their biomass in spring by 83% when compared to the average of other treatment combinations. Effects of treatment combinations on spring viability of red rice differed between winters, but no significant effects were found within winters. Autumn disking followed by flooding until early March reduced rice straw and suppressed winter weeds the most, but with additional costs. To obtain the most agronomic benefits, we recommend that rice growers forgo autumn disking and flood fields until early March, which will provide moderate straw reduction, good weed suppression, and predicted savings of $22.24-62.93/ha (U.S.) ($9.00-25.47/ac). Maintenance of floods on ricefields until early March also benefits waterfowl and other waterbirds by providing foraging habitat throughout winter.

Rice emissions during field flooding and air pollution feedbacks across South Korea

NASA Astrophysics Data System (ADS)

So, C.; Diskin, G. S.; DiGangi, J. P.; Choi, Y.; Rana, M.; Hughes, S.; Blake, D. R.; Nault, B.; Schroeder, J.; Campuzano Jost, P.; Jimenez, J. L.; Kim, M. J.; Teng, A.; Crounse, J. D.; Wenneberg, P.; Kaser, L.; Mikoviny, T.; Müller, M.; Wisthaler, A.; Pusede, S. E.

2017-12-01

Nitrous oxide (N2O) and methane (CH4) are important long-lived greenhouse gases. Known anthropogenic sources of these gases include rice cultivation, which represents anywhere between 5% and 20% of methane emissions globally. Other volatile molecules are also produced by soil biogeochemistry when rice fields are flooded, including small organic oxygenates. Here, we use recent aircraft measurements from the KORUS-AQ experiment to describe controls over rice emissions of N2O and CH4 at regional-scales across the South Korean Peninsula. We also investigate potential emissions of molecular hydrogen and volatile alcohols and organic acids and consider the effect of aerosol nitrate and sulfate deposition on rice soil biogeochemistry on paddies downwind of polluted urban areas.

Development of an Improved Irrigation Subroutine in SWAT to Simulate the Hydrology of Rice Paddy Grown under Submerged Conditions

NASA Astrophysics Data System (ADS)

Muraleedharan, B. V.; Kathirvel, K.; Narasimhan, B.; Nallasamy, N. D.

2014-12-01

Soil Water Assessment Tool (SWAT) is a basin scale, distributed hydrological model commonly used to predict the effect of management decisions on the hydrologic response of watersheds. Hydrologic response is decided by the various components of water balance. In the case of watersheds located in south India as well as in several other tropical countries around the world, paddy is one of the dominant crop controlling the hydrologic response of a watershed. Hence, the suitability of SWAT in replicating the hydrology of paddy fields needs to be verified. Rice paddy fields are subjected to flooding method of irrigation, while the irrigation subroutines in SWAT are developed to simulate crops grown under non flooding conditions. Moreover irrigation is represented well in field scale models, while it is poorly represented within watershed models like SWAT. Reliable simulation of flooding method of irrigation and hydrology of the fields will assist in effective water resources management of rice paddy fields which are one of the major consumers of surface and ground water resources. The current study attempts to modify the irrigation subroutine in SWAT so as to simulate flooded irrigation condition. A field water balance study was conducted on representative fields located within Gadana, a subbasin located in Tamil Nadu (southern part of India) and dominated by rice paddy based irrigation systems. The water balance of irrigated paddy fields simulated with SWAT was compared with the water balance derived by rice paddy based crop growth model named ORYZA. The variation in water levels along with the soil moisture variation predicted by SWAT was evaluated with respect to the estimates derived from ORYZA. The water levels were further validated with field based water balance measurements taken on a daily scale. It was observed that the modified irrigation subroutine was able to simulate irrigation of rice paddy within SWAT in a realistic way compared to the existing method.

Biogeochemical cycling in Rice Agroecosystems Resulting From Water and Si management: Implications for As abatement and Sustainable Rice Production

NASA Astrophysics Data System (ADS)

Seyfferth, A.; Limmer, M. A.; Amaral, D.; Teasley, W.

2017-12-01

Flooded rice agroecosystems favor geochemical conditions that mobilize soil-bound arsenic (As) and produce methane (CH4). These negative outcomes of flooded rice may lead to As exposure upon As-laden rice grain consumption and enhanced greenhouse gas emissions. Periodic draining of fields (e.g., alternate wetting and drying) is effective at minimizing these negative outcomes, but may reduce rice yield, increase toxic Cd in grain, and increase nitrous oxide (N2O) emissions. Because 3 of the 4 dominant chemical form of As in flooded paddy soil share the efficient Si uptake pathway, increasing plant-available Si can decrease toxic As in grain and boost yield, particularly when plants are stressed with As. We used combined pot and field studies to examine the biogeochemical cycling of As, Fe, Si, and C when plants are grown with water and/or Si management, the latter of which under both low and high As conditions. We show that increasing plant-available Si can be used alone or in conjunction with water management to improve rice yields depending on the edaphic conditions. These processes and findings will be discussed in the larger context of global food security.

Global estimations of the inventory and mitigation potential of methane emissions from rice cultivation conducted using the 2006 Intergovernmental Panel on Climate Change Guidelines

NASA Astrophysics Data System (ADS)

Yan, Xiaoyuan; Akiyama, Hiroko; Yagi, Kazuyuki; Akimoto, Hajime

2009-06-01

The Intergovernmental Panel on Climate Change (IPCC) regularly publishes guidelines for national greenhouse gas inventories and methane emission (CH4) from rice paddies has been an important component of these guidelines. While there have been many estimates of global CH4 emissions from rice fields, none of them have been obtained using the IPCC guidelines. Therefore, we used the Tier 1 method described in the 2006 IPCC guidelines to estimate the global CH4 emissions from rice fields. To accomplish this, we used country-specific statistical data regarding rice harvest areas and expert estimates of relevant agricultural activities. The estimated global emission for 2000 was 25.6 Tg a-1, which is at the lower end of earlier estimates and close to the total emission summarized by individual national communications. Monte Carlo simulation revealed a 95% uncertainty range of 14.8-41.7 Tg a-1; however, the estimation uncertainty was found to depend on the reliability of the information available regarding the amount of organic amendments and the area of rice fields that were under continuous flooding. We estimated that if all of the continuously flooded rice fields were drained at least once during the growing season, the CH4 emissions would be reduced by 4.1 Tg a-1. Furthermore, we estimated that applying rice straw off season wherever and whenever possible would result in a further reduction in emissions of 4.1 Tg a-1 globally. Finally, if both of these mitigation options were adopted, the global CH4 emission from rice paddies could be reduced by 7.6 Tg a-1. Although draining continuously flooded rice fields may lead to an increase in nitrous oxide (N2O) emission, the global warming potential resulting from this increase is negligible when compared to the reduction in global warming potential that would result from the CH4 reduction associated with draining the fields.

Can southern US rice cultivars be used to mitigate greenhouse gas emissions? A preliminary study.

USDA-ARS?s Scientific Manuscript database

Most rice in the world is produced under flooded paddy conditions as a means of producing high stable yields and controlling non-aquatic weeds. However, the anaerobic soil conditions that occur as a result of the flooded fields cause high levels of methane production due to bacterial methanogenesis....

Spatial distribution and temporal variability of arsenic in irrigated rice fields in Bangladesh. 2. Paddy soil.

PubMed

Dittmar, Jessica; Voegelin, Andreas; Roberts, Linda C; Hug, Stephan J; Saha, Ganesh C; Ali, M Ashraf; Badruzzaman, A Borhan M; Kretzschmar, Ruben

2007-09-01

Arsenic-rich groundwater from shallow tube wells is widely used for the irrigation of boro rice in Bangladesh and West Bengal. In the long term this may lead to the accumulation of As in paddy soils and potentially have adverse effects on rice yield and quality. In the companion article in this issue, we have shown that As input into paddy fields with irrigation water is laterally heterogeneous. To assess the potential for As accumulation in soil, we investigated the lateral and vertical distribution of As in rice field soils near Sreenagar (Munshiganj, Bangladesh) and its changes over a 1 year cycle of irrigation and monsoon flooding. At the study site, 18 paddy fields are irrigated with water from a shallow tube well containing 397 +/- 7 microg L(-1) As. The analysis of soil samples collected before irrigation in December 2004 showed that soil As concentrations in paddy fields did not depend on the length of the irrigation channel between well and field inlet. Within individual fields, however, soil As contents decreased with increasing distance to the water inlet, leading to highly variable topsoil As contents (11-35 mg kg(-1), 0-10 cm). Soil As contents after irrigation (May 2005) showed that most As input occurred close to the water inlet and that most As was retained in the top few centimeters of soil. After monsoon flooding (December 2005), topsoil As contents were again close to levels measured before irrigation. Thus, As input during irrigation was at least partly counteracted by As mobilization during monsoon flooding. However, the persisting lateral As distribution suggests net arsenic accumulation over the past 15 years. More pronounced As accumulation may occur in regions with several rice crops per year, less intense monsoon flooding, or different irrigation schemes. The high lateral and vertical heterogeneity of soil As contents must be taken into account in future studies related to As accumulation in paddy soils and potential As transfer into rice.

Agricultural wetlands as potential hotspots for mercury bioaccumulation: Experimental evidence using caged fish

USGS Publications Warehouse

Ackerman, Joshua T.; Eagles-Smith, Collin A.

2010-01-01

Wetlands provide numerous ecosystem services, but also can be sources of methylmercury (MeHg) production and export. Rice agricultural wetlands in particular may be important sites for MeHg bioaccumulation due to their worldwide ubiquity, periodic flooding schedules, and high use by wildlife. We assessed MeHg bioaccumulation within agricultural and perennial wetlands common to California's Central Valley during summer, when the majority of wetland habitats are shallowly flooded rice fields. We introduced caged western mosquitofish (Gambusia affinis) within white rice (Oryza sativa), wild rice (Zizania palustris), and permanent wetlands at water inlets, centers, and outlets. Total mercury (THg) concentrations and body burdens in caged mosquitofish increased rapidly, exceeding baseline values at introduction by 135% to 1197% and 29% to 1566% among sites, respectively, after only 60 days. Mercury bioaccumulation in caged mosquitofish was greater in rice fields than in permanent wetlands, with THg concentrations at wetland outlets increasing by 12.1, 5.8, and 2.9 times over initial concentrations in white rice, wild rice, and permanent wetlands, respectively. In fact, mosquitofish caged at white rice outlets accumulated 721 ng Hg/fish in just 60 days. Mercury in wild mosquito fish and Mississippi silversides (Menidia audens) concurrently sampled at wetland outlets also were greater in white rice and wild rice than permanent wetlands. Within wetlands, THg concentrations and body burdens of both caged and wild fish increased from water inlets to outlets in white rice fields, and tended to not vary among sites in permanent wetlands. Fish THg concentrations in agricultural wetlands were high, exceeding 0.2 ??g/g ww in 82% of caged fish and 59% of wild fish. Our results indicate that shallowly flooded rice fields are potential hotspots for MeHg bioaccumulation and, due to their global prevalence, suggest that agricultural wetlands may be important contributors to MeHg contamination.

Photodegradation of clothianidin under simulated California rice field conditions.

PubMed

Mulligan, Rebecca A; Redman, Zachary C; Keener, Megan R; Ball, David B; Tjeerdema, Ronald S

2016-07-01

Photodegradation can be a major route of dissipation for pesticides applied to shallow rice field water, leading to diminished persistence and reducing the risk of offsite transport. The objective of this study was to characterize the aqueous-phase photodegradation of clothianidin under simulated California rice field conditions. Photodegradation of clothianidin was characterized in deionized, Sacramento River and rice field water samples. Pseudo-first-order rate constants and DT50 values in rice field water (mean k = 0.0158 min(-1) ; mean DT50 = 18.0 equivalent days) were significantly slower than in deionized water (k = 0.0167 min(-1) ; DT50 = 14.7 equivalent days) and river water (k = 0.0146 min(-1) ; DT50 = 16.6 equivalent days) samples. Quantum yield ϕc values demonstrate that approximately 1 and 0.5% of the light energy absorbed results in photochemical transformation in pure and field water respectively. Concentrations of the photodegradation product thiazolymethylurea in aqueous photolysis samples were determined using liquid chromatography-tandem mass spectrometry and accounted for ≤17% in deionized water and ≤8% in natural water. Photodegradation rates of clothianidin in flooded rice fields will be controlled by turbidity and light attenuation. Aqueous-phase photodegradation may reduce the risk of offsite transport of clothianidin from flooded rice fields (via drainage) and mitigate exposure to non-target organisms. © 2015 Society of Chemical Industry. © 2015 Society of Chemical Industry.

Sequential Classifier Training for Rice Mapping with Multitemporal Remote Sensing Imagery

NASA Astrophysics Data System (ADS)

Guo, Y.; Jia, X.; Paull, D.

2017-10-01

Most traditional methods for rice mapping with remote sensing data are effective when they are applied to the initial growing stage of rice, as the practice of flooding during this period makes the spectral characteristics of rice fields more distinguishable. In this study, we propose a sequential classifier training approach for rice mapping that can be used over the whole growing period of rice for monitoring various growth stages. Rice fields are firstly identified during the initial flooding period. The identified rice fields are used as training data to train a classifier that separates rice and non-rice pixels. The classifier is then used as a priori knowledge to assist the training of classifiers for later rice growing stages. This approach can be applied progressively to sequential image data, with only a small amount of training samples being required from each image. In order to demonstrate the effectiveness of the proposed approach, experiments were conducted at one of the major rice-growing areas in Australia. The proposed approach was applied to a set of multitemporal remote sensing images acquired by the Sentinel-2A satellite. Experimental results show that, compared with traditional spectral-indexbased algorithms, the proposed method is able to achieve more stable and consistent rice mapping accuracies and it reaches higher than 80% during the whole rice growing period.

Seed deterioration in flooded agricultural fields during winter

USGS Publications Warehouse

Nelms, C.O.; Twedt, D.J.

1996-01-01

We determined rate of seed deterioration for 3 crops (corn, rice, and soybean) and 8 weeds commonly found in agricultural fields and moist-soil management units in the Mississippi Alluvial Valley (MAV). The weeds were broadleaf signalgrass (Brachiaria platyphylla), junglerice barnyardgrass (Echinochloa colonum), morningglory (Ipomoea sp.), panic grass (Panicum sp.), bull paspalum (Paspalum boscianum), red rice (Oryza sativa), hemp sesbania (Sesbania exaltata), and bristlegrass (Setaria sp.). Weed seeds, except morningglory, deteriorated slower than corn and soybean, whereas rice decomposed slower than all weed seeds except red rice and bull paspalum. For land managers desiring to provide plant food for wintering waterfowl, rice is clearly the most persistent small grain crop in the MAV. Persistence of weed seeds under flooded conditions throughout winter makes them a cost-effective alternative to traditional crops on land managed for waterfowl.

Combining eddy-covariance measurements and Penman-Monteith type models to estimate evapotranspiration of flooded and aerobic rice

NASA Astrophysics Data System (ADS)

Facchi, Arianna; Masseroni, Daniele; Gharsallah, Olfa; Gandolfi, Claudio

2014-05-01

Rice is of great importance both from a food supply point of view, since it represents the main food in the diet of over half the world's population, and from a water resources point of view, since it consumes almost 40% of the water amount used for irrigation. About 90% of global production takes place in Asia, while European production is quantitatively modest (about 3 million tons). However, Italy is the Europe's leading producer, with over half of total production, almost totally concentrated in a large traditional paddy rice area between the Lombardy and Piedmont regions, in the north-western part of the country. In this area, irrigation of rice is traditionally carried out by continuous flooding. The high water requirement of this irrigation regime encourages the introduction of water saving irrigation practices, as flood irrigation after sowing in dry soil and intermittent irrigation (aerobic rice). In the agricultural season 2013 an intense monitoring activity was conducted on three experimental fields located in the Padana plain (northern Italy) and characterized by different irrigation regimes (traditional flood irrigation, flood irrigation after sowing in dry soil, intermittent irrigation), with the aim of comparing the water balance terms for the three irrigation treatments. Actual evapotranspiration (ET) is one of the terms, but, unlike others water balance components, its field monitoring requires expensive instrumentation. This work explores the possibility of using only one eddy covariance system and Penman-Monteith (PM) type models for the determination of ET fluxes for the three irrigation regimes. An eddy covariance station was installed on the levee between the traditional flooded and the aerobic rice fields, to contemporaneously monitor the ET fluxes from this two treatments as a function of the wind direction. A detailed footprint analysis was conducted - through the application of three different analytical models - to determine the position and the size of the footprint area at each monitoring time step (30-min). Two sets of half-hourly ET values, each one concerning one of the two treatments, were therefore obtained, each one comprising about 10-15% of the daytime time steps over the whole agricultural season. To confirm the reliability of the measured ET fluxes, the energy balance closure was computed for the two fields and resulted in an imbalance lower than 10% for both the irrigation treatments. The two eddy covariance data-sets were then used to calibrate three Penman-Monteith type models: one for the estimation of the rice crop transpiration (T), the second for the soil evaporation (ES), and the third for the evaporation from the water covering the soil in the case of flooded rice fields (EH20). Models were implemented using the available agro-meteorological data detected over the rice canopies and the periodically measured values of crop parameters (leaf area index, crop height). Finally, the calibrated models were used to compute the complete hourly ET data series for the three irrigation regimes.

Weed control in organic rice using plastic mulch and water seeding methods in addition to cover crops

USDA-ARS?s Scientific Manuscript database

Weeds are a major yield limiting factor in organic rice farming and are more problematic than in conventional production systems. Water seeding is a common method of reducing weed pressure in rice fields as many weeds connot tolerate flooded field conditions. The use of cover crops is another method...

Root attributes affecting water uptake of rice (Oryza sativa) under drought

PubMed Central

Henry, Amelia

2012-01-01

Lowland rice roots have a unique physiological response to drought because of their adaptation to flooded soil. Rice root attributes that facilitate growth under flooded conditions may affect rice response to drought, but the relative roles of root structural and functional characteristics for water uptake under drought in rice are not known. Morphological, anatomical, biochemical, and molecular attributes of soil-grown rice roots were measured to investigate the genotypic variability and genotype×environment interactions of water uptake under variable soil water regimes. Drought-resistant genotypes had the lowest night-time bleeding rates of sap from the root system in the field. Diurnal fluctuation predominated as the strongest source of variation for bleeding rates in the field and root hydraulic conductivity (Lp r) in the greenhouse, and was related to expression trends of various PIP and TIP aquaporins. Root anatomy was generally more responsive to drought treatments in drought-resistant genotypes. Suberization and compaction of sclerenchyma layer cells decreased under drought, whereas suberization of the endodermis increased, suggesting differential roles of these two cell layers for the retention of oxygen under flooded conditions (sclerenchyma layer) and retention of water under drought (endodermis). The results of this study point to the genetic variability in responsiveness to drought of rice roots in terms of morphology, anatomy, and function. PMID:22791828

Root attributes affecting water uptake of rice (Oryza sativa) under drought.

PubMed

Henry, Amelia; Cal, Andrew J; Batoto, Tristram C; Torres, Rolando O; Serraj, Rachid

2012-08-01

Lowland rice roots have a unique physiological response to drought because of their adaptation to flooded soil. Rice root attributes that facilitate growth under flooded conditions may affect rice response to drought, but the relative roles of root structural and functional characteristics for water uptake under drought in rice are not known. Morphological, anatomical, biochemical, and molecular attributes of soil-grown rice roots were measured to investigate the genotypic variability and genotype×environment interactions of water uptake under variable soil water regimes. Drought-resistant genotypes had the lowest night-time bleeding rates of sap from the root system in the field. Diurnal fluctuation predominated as the strongest source of variation for bleeding rates in the field and root hydraulic conductivity (Lpr) in the greenhouse, and was related to expression trends of various PIP and TIP aquaporins. Root anatomy was generally more responsive to drought treatments in drought-resistant genotypes. Suberization and compaction of sclerenchyma layer cells decreased under drought, whereas suberization of the endodermis increased, suggesting differential roles of these two cell layers for the retention of oxygen under flooded conditions (sclerenchyma layer) and retention of water under drought (endodermis). The results of this study point to the genetic variability in responsiveness to drought of rice roots in terms of morphology, anatomy, and function.

Genetic and field management strategies to for limiting accumulation of arsenic in rice grains

USDA-ARS?s Scientific Manuscript database

In 2002, high levels of arsenic were reported in rice produced in Bangladesh using soil and water naturally high in arsenic. Study of arsenic in rice produced in additional countries, including the USA, soon followed. Grain-arsenic is higher in rice than other crops because the flooding of rice pa...

Rice available to waterfowl in harvested fields in the Sacramento Valley, California

USGS Publications Warehouse

Miller, M.R.; Sharp, D.E.; Gilmer, D.S.; Mulvaney, W.R.

1989-01-01

Rice fields in the Sacramento Valley, California were sampled in 1985 and 1986 to determine the weight of rice seed remaining in the fields immediately after harvest and again after the fields were burned. No significant differences were found between years (P>0.05). The pooled mean was 388 kg/ha in harvested fields and 276 kg/ha in burned fields. These values are less than estimates previously available. The values for harvested fields both years were no different (P>0.05) than values obtained by the U.S. Department of Agriculture (USDA). Surveys of rice fields in December both years showed that most fields were left either harvested (26-32%) or burned (37-40%) through the winter. Fields flooded for duck hunting made up 15% of the total. The proportion of fields plowed by December increased from 14% in 1985 to 22% in 1986. Sixty-three percent of all fields that had been flooded for hunting were drained within two weeks after the end of the hunting season. Harvest yield field size levee type (contour, lasered), straw status (spread, windrowed), harvest date, and rice variety did not affect the quantity of seeds remaining after harvest (P>0.05). One harvester model, the Hardy Harvester, left more rice in fields than did others we tested (P<0.001). Specific management programs are recommended to mitigate annual variation in rice seed availability to waterfowl caused by differences in total hectares grown (15% less in 1986) and in the proportion of fields burned and plowed.

Flooding tolerance of soybean (Glycine max) germplasm from southeast Asia under field and screen-house environment

USDA-ARS?s Scientific Manuscript database

Soybean (Glycine max L. Merr.) cultivars from the U.S. are generally intolerant to flooding stress. Soybean germplasm and cultivars originating from other countries and grown in rotations with paddy rice potentially could have better flooding tolerance. Screen-house and field tests were conducted to...

Greenhouse gas budget from a rice paddy field in the Albufera of Valencia, Spain.

NASA Astrophysics Data System (ADS)

Meijide, Ana; López-Ballesteros, Ana; Calvo-Roselló, Esperanza; López-Jiménez, Ramón; Recio-Huetos, Jaime; Calatayud, Vicent; Carrara, Arnaud; Serrano-Ortiz, Penelope

2017-04-01

Rice paddy fields are large sources of anthropogenic methane (CH4) and therefore many studies have assessed CH4 fluxes from rice paddy fields, mainly in Asia where most of the rice cultivation takes place. However, rice is also cultivated in the Mediterranean, where climatic and management conditions greatly differ. In the Albufera of Valencia, the largest freshwater lagoon in Spain, rice paddy fields have the particularity of being flooded not only while the rice grows, but also after the harvest during the winter. These flooding conditions might result in emissions which are very specific of this ecosystem, and cannot be extrapolated from other studies. We studied CH4 fluxes in a rice paddy field in the Albufera of Valencia at different stages of rice cultivation using the eddy covariance technique and static chambers. We additionally measured carbon dioxide (CO2), water fluxes and nitrous oxide (N2O) fluxes with eddy covariance and chamber methods respectively, in order to obtain a full greenhouse gas (GHG) budget. Our study also aimed at providing a mechanistic understanding of GHG emissions at different stages of rice cultivation, and therefore we also used the Enhanced and Normalized Vegetation Indexes (EVI and NDVI, respectively), derived from remote sensing images. The general ecosystem functioning encompasses three different phases. The first one, over the autumn and the winter, a biological dormancy period causes low CO2 emissions (ca. 1-5 µmol m-2 s-1), which coincides with the EVI and NDVI. The intermittent flooding taking place during this period is expected to cause CH4 emissions. Then, during the spring months (March-May), larger CO2 respiratory emissions take place during the daytime (> 5 µmol m-2 s-1) due to an increase in air temperature, which turn to neutral at the end of spring due to the start of photosynthesis by the rice. The third phase corresponds to the vegetation growth, when the net CO2 uptake increases gradually up to maximum CO2 sequestration rates of ca. 40 µmol m-2 s-1. During this period, the higher air temperature together with the flooding allows for the development of rice plants, resulting in the highest EVI and NDVI values (0.59 and 0.85, respectively) and nighttime maximum CO2 emissions (5-10 µmol m-2 s-1). These conditions also favor the production of CH4, which make the rice paddy field a CH4 source. The ecosystem behaved as a N2O sink during most of the study period. Positive N2O emissions were only observed at the beginning of the vegetation growth phase, which seems to be related to fertilizer application.

Temporal variability in trace metal solubility in a paddy soil not reflected in uptake by rice (Oryza sativa L.).

PubMed

Pan, Yunyu; Koopmans, Gerwin F; Bonten, Luc T C; Song, Jing; Luo, Yongming; Temminghoff, Erwin J M; Comans, Rob N J

2016-12-01

Alternating flooding and drainage conditions have a strong influence on redox chemistry and the solubility of trace metals in paddy soils. However, current knowledge of how the effects of water management on trace metal solubility are linked to trace metal uptake by rice plants over time is still limited. Here, a field-contaminated paddy soil was subjected to two flooding and drainage cycles in a pot experiment with two rice plant cultivars, exhibiting either high or low Cd accumulation characteristics. Flooding led to a strong vertical gradient in the redox potential (Eh). The pH and Mn, Fe, and dissolved organic carbon concentrations increased with decreasing Eh and vice versa. During flooding, trace metal solubility decreased markedly, probably due to sulfide mineral precipitation. Despite its low solubility, the Cd content in rice grains exceeded the food quality standards for both cultivars. Trace metal contents in different rice plant tissues (roots, stem, and leaves) increased at a constant rate during the first flooding and drainage cycle but decreased after reaching a maximum during the second cycle. As such, the high temporal variability in trace metal solubility was not reflected in trace metal uptake by rice plants over time. This might be due to the presence of aerobic conditions and a consequent higher trace metal solubility near the root surface, even during flooding. Trace metal solubility in the rhizosphere should be considered when linking water management to trace metal uptake by rice over time.

Effects of ferrous sulfate amendment and water management on rice growth and metal(loid) accumulation in arsenic and lead co-contaminated soil.

PubMed

Zou, Lina; Zhang, Shu; Duan, Dechao; Liang, Xinqiang; Shi, Jiyan; Xu, Jianming; Tang, Xianjin

2018-03-01

Arsenic (As) and lead (Pb) commonly co-exist with high concentrations in paddy soil mainly due to human activities in south of China. This study investigates the effect of ferrous sulfate (FeSO 4 ) amendment and water management on rice growth and arsenic (As) and lead (Pb) accumulation in rice plants. A paddy soil co-contaminated with As and Pb was chosen for the pot experiment with three FeSO 4 levels (0, 0.25, and 1%, on a dry weight basis) and two water managements (flooded, non-flooded). The concentrations of As and Pb in iron plaques and rice plants were determined. Application of FeSO 4 and non-flooded conditions significantly accelerated the growth of rice plants. With the addition of FeSO 4 , iron plaques were significantly promoted and most of the As and Pb were sequestered in the iron plaques. The addition of 0.25% FeSO 4 and non-flooded conditions did not significantly change the accumulation of As and Pb in rice grains. The practice also significantly decreased the translocation factor (TF) of As and Pb from roots to above-ground parts which might have been aided by the reduction of As and Pb availability in soil, the preventing effect of rice roots, and the formation of more reduced glutathione (GSH). Flooded conditions decreased the Pb concentration in rice plants, but increased As accumulation. Moreover, rice grew thin and weak and even died under flooded conditions. Overall, an appropriate FeSO 4 dose and non-flooded conditions might be feasible for rice cultivation, especially addressing the As issue in the co-contaminated soil. However, further detailed studies to decrease the accumulation of Pb in edible parts and the field application in As and Pb co-contaminated soil are recommended.

Prone to fix: Resilience of the active nitrogen-fixing rice root microbiome

NASA Astrophysics Data System (ADS)

Hurek, Thomas; Sabale, Mugdha; Sarkar, Abhijit; Pees, Tobias; Reinhold-Hurek, Barbara

2016-04-01

Due to water consumption, many lowland rice areas in Asia are undergoing a transition that involves adoption of new management strategies, with crop rotations encompassing a non-flooded crop, including maize. Shifting from flooded to non-flooded cropping is likely to affect microbial nitrogen cycling. For analysis of the root-associated microbiome of rice and maize in response to flooding or nitrogen fertilizer, we combine methods of microbial ecology (Next-Generation sequencing of amplicons), and a reductionist approach with pure cultures of the endophytic diazotroph Azoarus sp.. Field plots of the ICON project (Introducing non-flooded crops in rice-dominated landscapes: Impact on Carbon, nitrogen and water budgets) at the International Rice Research Institute in the Philippines were analyzed. Root-associated activity of nitrogenase gene expression was assessed by quantitative RT-PCR of nifH. For rice, expression levels were surprisingly stable, in response to non-flooded versus flooded conditions, or in response to conventional nitrogen fertilizer applications versus lack of N-fertilizer. In contrast, the active diazotrophic population of maize roots was not resistant to N-fertilization, nifH expression strongly decreased. Concordant changes in the diazotrophic resident or active communities were detected by nifH amplicon sequence analysis, based on bacterial DNA or mRNA, respectively. For high-resolution analyses of the endobiome in gnotobiotic culture, we developed a dual fluorescence reporter system for Azoarcus sp. BH72 which allows to quantify and visualize epi- and endophytic gene expression by concfocal microscopy (CLSM). This allowed us to demonstrate sites of active nitrogen fixation (gene expression) in association with rice roots. We confirmed that at low nitrogen fertilizer levels, endophytic nifH gene expression persisted in rice roots, while it was repressed in maize roots. This supports our observation of remarkable stability of nitrogen fixation in association with rice roots.

Field evidence for the potential of Rhodobacter capsulatus as Biofertilizer for flooded rice.

PubMed

Gamal-Eldin, Hosny; Elbanna, Khaled

2011-02-01

In a previous study, we evaluated the effects of inoculating rice plants with the phototrophic purple nonsulfur bacterium Rhodobacter capsulatus (Rc) on growth and yield of rice in pots and lysimeter experiments and the results obtained have been highly encouraging. In this study, we carried out two field experiments: one in the experimental farm of the Faculty of Agriculture, Fayoum University, and the second in a farmer's field in Kafr El-sheikh, to assess the effects of Rc on growth and yield of rice in comparison and in combination with chemical nitrogen fertilizer (CNF) and farmyard manure. The results indicated that both biological and grain yields in all the Rc inoculated treatments were significantly higher than those in the uninoculated corresponding treatments in both fields. With regard to grain yield, the major factor for determining the effectiveness of any agricultural treatment, inoculation with Rc in combination with 50% of the recommended CNF rate gave a grain yield that was statistically equivalent to that obtained with 100% of the recommended CNF rate. These results provide a clear evidence for the potential of Rc as biofertilizer for flooded rice under field conditions.

Mapping paddy rice distribution using multi-temporal Landsat imagery in the Sanjiang Plain, northeast China

PubMed Central

XIAO, Xiangming; DONG, Jinwei; QIN, Yuanwei; WANG, Zongming

2016-01-01

Information of paddy rice distribution is essential for food production and methane emission calculation. Phenology-based algorithms have been utilized in the mapping of paddy rice fields by identifying the unique flooding and seedling transplanting phases using multi-temporal moderate resolution (500 m to 1 km) images. In this study, we developed simple algorithms to identify paddy rice at a fine resolution at the regional scale using multi-temporal Landsat imagery. Sixteen Landsat images from 2010–2012 were used to generate the 30 m paddy rice map in the Sanjiang Plain, northeast China—one of the major paddy rice cultivation regions in China. Three vegetation indices, Normalized Difference Vegetation Index (NDVI), Enhanced Vegetation Index (EVI), and Land Surface Water Index (LSWI), were used to identify rice fields during the flooding/transplanting and ripening phases. The user and producer accuracies of paddy rice on the resultant Landsat-based paddy rice map were 90% and 94%, respectively. The Landsat-based paddy rice map was an improvement over the paddy rice layer on the National Land Cover Dataset, which was generated through visual interpretation and digitalization on the fine-resolution images. The agricultural census data substantially underreported paddy rice area, raising serious concern about its use for studies on food security. PMID:27695637

Mercury Cycling in Agricultural and Non-agricultural Wetlands of the Yolo Bypass Wildlife Area, California: Sediment Biogeochemistry

NASA Astrophysics Data System (ADS)

Marvin-Dipasquale, M. C.; Windham-Myers, L.; Alpers, C. N.; Agee, J. L.; Cox, M. H.; Kakouros, E.; Wren, S. L.

2007-12-01

The Yolo Bypass Wildlife Area (YBWA) is part of the larger Yolo Bypass floodwater protection zone associated with the Sacramento River and the Sacramento-San Joaquin Delta, California. Land use in the YBWA consists of white and wild rice fields, seasonally flooded fallow agricultural fields, and permanently and seasonally flooded non-agricultural wetlands used for resident and migratory waterfowl. A recent assessment of mercury (Hg) and methylmercury (MeHg) loads indicates that the Yolo Bypass is responsible for a high proportion of the aqueous MeHg entering the Delta, and that biota from the Yolo Bypass are considerably elevated in MeHg. The current study examines benthic MeHg production and biogeochemical controls on this process, as a function of YBWA land use, wetland management, and agricultural practices during the 2007 rice growing season (June to October). Preliminary results indicate that in the week following initial flooding of agricultural fields, prior to the establishment of rice plants, the microbial community in the 0-2 cm surface sediment zone exhibited very little potential Hg(II)-methylation activity compared to the permanent wetland habitat (as assessed via the 203Hg(II)- methylation assay). Approximately 1 month after flooding, rice plants were established and the activity of the resident Hg(II)-methylating microbial community had increased substantially in all agricultural fields, although the observed rates of MeHg production were still much lower than those observed in the permanent wetland setting. Ongoing field sampling includes analysis of reactive Hg(II) in sediments and of iron and sulfur redox species in sediments and pore waters.

Fall rice straw management and winter flooding treatment effects on a subsequent soybean crop

USGS Publications Warehouse

Anders, M.M.; Windham, T.E.; McNew, R.W.; Reinecke, K.J.

2005-01-01

The effects of fall rice (Oryza sativa L.) straw management and winter flooding on the yield and profitability of subsequent irrigated and dryland soybean [Glycine max (L.) Merr.] crops were studied for 3 years. Rice straw treatments consisted of disking, rolling, or standing stubble. Winter flooding treatments consisted of maintaining a minimum water depth of 10 cm by pumping water when necessary, impounding available rainfall, and draining fields to prevent flooding. The following soybean crop was managed as a conventional-tillage system or no-till system. Tillage system treatments were further divided into irrigated or dryland. Results indicated that there were no significant effects from either fall rice straw management or winter flooding treatments on soybean seed yields. Soybean seed yields for, the conventional tillage system were significantly greater than those for the no-till system for the first 2 yrs and not different in the third year. Irrigated soybean seed yields were significantly greater than those from dryland plots for all years. Net economic returns averaged over the 3 yrs were greatest ($390.00 ha-1) from the irrigated no-till system.

Rice rhizosphere soil and root surface bacterial community response to water management changes

USDA-ARS?s Scientific Manuscript database

Different water management practices could affect microbial populations in the rice rhizosphere. A field-scale study was conducted to evaluate microbial populations in the root plaque and rhizosphere of rice in response to continuous and intermittent flooding conditions. Microbial populations in rhi...

The distribution of the invasive pest, rice water weevil Lissorhoptrus oryzophilus (Coleoptera: Curculionidae), is expanding in Europe: First record in the Balkans, confirmed by CO1 DNA barcoding

USDA-ARS?s Scientific Manuscript database

This is the first report of the invasive rice pest, rice water weevil (Lissorhoptrus oryzophilus Kuschel) in the Balkans. Adult specimens were collected in flooded rice fields in the principal rice-growing region of Central Macedonia, Greece during July-August, 2016. Morphological identification was...

Dissipation of the Herbicide Benzobicyclon Hydrolysate in a Model California Rice Field Soil.

PubMed

Williams, Katryn L; Gladfelder, Joshua J; Quigley, Lindsay L; Ball, David B; Tjeerdema, Ronald S

2017-10-25

The herbicide benzobicyclon (BZB; 3-(2-chloro-4-(methylsulfonyl)benzoyl)-2-phenylthiobicyclo[3.2.1]oct-2-en-4-one) has recently been approved for use on California rice fields by the United States Environmental Protection Agency (U.S. EPA). Hydrolysis of BZB rapidly forms the active compound, benzobicyclon hydrolysate (BH), whose fate is currently not well understood. A model California rice soil was used to determine BH soil dissipation. The pK a and aqueous solubility were also determined, as experimental values are not currently available. Sorption data indicate BH does not bind tightly, or irreversibly, with this soil. Flooding resulted in decreased BH loss, indicating anaerobic microbes are less likely to transform BH compared to aerobic microorganisms. Temperature increased dissipation, while autoclaving decreased BH loss. Overall, dissipation was slow regardless of treatment. Further investigation is needed to elucidate the exact routes of loss in soil, though BH is expected to dissipate slowly in flooded rice field soil.

The effect of water regime and soil management on methane (CH4) emission of rice field

NASA Astrophysics Data System (ADS)

Naharia, O.; Setyanto, P.; Arsyad, M.; Burhan, H.; Aswad, M.

2018-05-01

Mitigation of CH4 emission of rice field is becoming a serious issue. The Agricultural Environment Preservation Research Station in Central Java conducted a field study to investigate the effect of water regime and soil tillage on CH4 emission from paddy fields. Treatments consisted of two factors. The first factor was water regime, e.g., 1) continuously flooded 5 cm, 2) intermittent irrigation and 3) saturated water condition at 0-1 cm water level. The second factor was soil management, e.g., 1) normal tillage, 2) zero tillage + 3 sulfosate ha-1 and 3) zero tillage + 3 L paraquat ha-1. Most of treatments gave a significant reduction of total CH4 emission between 34 – 85% during the wet season crop as compared to normal rice cropping practice, while in the dry season the CH4 reduction ranged between 16 – 92%. No-tillage with non-selective herbicides combined with intermittent/saturated irrigation system significantly reduced methane emission without significantly affecting rice productivity as compared to normal tillage with continuous flooding (farmers practice)

Investigating flood susceptible areas in inaccessible regions using remote sensing and geographic information systems.

PubMed

Lim, Joongbin; Lee, Kyoo-Seock

2017-03-01

Every summer, North Korea (NK) suffers from floods, resulting in decreased agricultural production and huge economic loss. Besides meteorological reasons, several factors can accelerate flood damage. Environmental studies about NK are difficult because NK is inaccessible due to the division of Korea. Remote sensing (RS) can be used to delineate flood inundated areas in inaccessible regions such as NK. The objective of this study was to investigate the spatial characteristics of flood susceptible areas (FSAs) using multi-temporal RS data and digital elevation model data. Such study will provide basic information to restore FSAs after reunification. Defining FSAs at the study site revealed that rice paddies with low elevation and low slope were the most susceptible areas to flood in NK. Numerous sediments from upper streams, especially streams through crop field areas on steeply sloped hills, might have been transported and deposited into stream channels, thus disturbing water flow. In conclusion, NK floods may have occurred not only due to meteorological factors but also due to inappropriate land use for flood management. In order to mitigate NK flood damage, reforestation is needed for terraced crop fields. In addition, drainage capacity for middle stream channel near rice paddies should be improved.

Annual Changes of Paddy Rice Planting Areas in Northeastern Asia from MODIS images in 2000-2014

NASA Astrophysics Data System (ADS)

Xiao, X.; Zhang, G.; Dong, J.; Menarguez, M. A.; Kou, W.; Jin, C.; Qin, Y.; Zhou, Y.; Wang, J.; Moore, B., III

2014-12-01

Knowledge of the area and spatial distribution of paddy rice is important for assessment of food security, management of water resources, estimation of greenhouse gas (methane) emissions, and understanding avian influenza virus transmission. Over the past two decades, paddy rice cultivation has expanded northward in temperate and cold temperate zones, particularly in Northeastern China. There is a need to quantify and map changes in paddy rice planting areas in Northeastern Asia (Japan, North and South Korea, and northeast China) at annual interval. We developed a pixel- and phenology-based image analysis system, MODIS-RICE, to map the paddy rice in Northeastern Asia by using multi-temporal MODIS thermal and surface reflectance imagery. Paddy rice fields during the flooding and transplanting phases have unique physical and spectral characteristics, which make it possible for the development of an automated and robust algorithm to track flooding and transplanting phases of paddy rice fields over time. In this presentation, we will show the MODIS-based annual maps of paddy rice planting area in the Northeastern Asia from 2000-2014 (500-m spatial resolution). Accuracy assessments using high-resolution images show that the resultant paddy rice map of Northeastern Asia had a comparable accuracy to the existing products, including 2010 Landsat-based National Land Cover Dataset (NLCD) of China, the 2010 RapidEye-based paddy rice map in North Korea, and the 2010 AVNIR-2-based National Land Cover Dataset in Japan in terms of both area and spatial pattern of paddy rice. This study has demonstrated that our novel MODIS-Rice system, which use both thermal and optical MODIS data over a year, are simple and robust tools to identify and map paddy rice fields in temperate and cold temperate zones.

Wetland management and rice farming strategies to decrease methylmercury bioaccumulation and loads from the Cosumnes River Preserve, California

USGS Publications Warehouse

Eagles-Smith, Collin A.; Ackerman, Joshua T.; Fleck, Jacob; Windham-Myers, Lisamarie; McQuillen, Harry; Heim, Wes

2014-01-01

We evaluated mercury (Hg) concentrations in caged fish (deployed for 30 days) and water from agricultural wetland (rice fields), managed wetland, slough, and river habitats in the Cosumnes River Preserve, California. We also implemented experimental hydrological regimes on managed wetlands and post-harvest rice straw management techniques on rice fields in order to evaluate potential Best Management Practices to decrease methylmercury bioaccumulation within wetlands and loads to the Sacramento-San Joaquin River Delta. Total Hg concentrations in caged fish were twice as high in rice fields as in managed wetland, slough, or riverine habitats, including seasonal managed wetlands subjected to identical hydrological regimes. Caged fish Hg concentrations also differed among managed wetland treatments and post-harvest rice straw treatments. Specifically, Hg concentrations in caged fish decreased from inlets to outlets in seasonal managed wetlands with either a single (fall-only) or dual (fall and spring) drawdown and flood-up events, whereas Hg concentrations increased slightly from inlets to outlets in permanent managed wetlands. In rice fields, experimental post-harvest straw management did not decrease Hg concentrations in caged fish. In fact, in fields in which rice straw was chopped and either disked into the soil or baled and removed from the fields, fish Hg concentrations increased from inlets to outlets and were higher than Hg concentrations in fish from rice fields subjected to the more standard post-harvest practice of simply chopping rice straw prior to fall flood-up. Finally, aqueous methylmercury (MeHg) concentrations and export were highly variable, and seasonal trends in particular were often opposite to those of caged fish. Aqueous MeHg concentrations and loads were substantially higher in winter than in summer, whereas caged fish Hg concentrations were relatively low in winter and substantially higher in summer. Together, our results highlight the importance of habitat, seasonal processes, and wetland management practices on Hg cycling and ecological risk in aquatic ecosystems.

Hot Spots and Hot Moments of Methylmercury Production Associated With Agricultural and Non-agricultural Wetlands of the Yolo Bypass Wildlife Area, California

NASA Astrophysics Data System (ADS)

Marvin-Dipasquale, M.; Windham-Myers, L.; Agee, J. L.; Kakouros, E.; Cox, M. H.; Fleck, J.; Alpers, C. N.; Stephenson, M.

2008-12-01

The Yolo Bypass Wildlife Area (YBWA) is part of the larger Yolo Bypass floodwater protection zone associated with the Sacramento River and the Sacramento-San Joaquin Delta, in California. While mercury contamination is widespread throughout the region due to historic mining practices, the Yolo Bypass is responsible for a high proportion of the aqueous methylmercury (MeHg) entering the Delta, and biota from the Yolo Bypass are particularly elevated in toxic MeHg. Land use in the YBWA includes seasonally flooded agricultural fields (white rice, wild rice, fallow fields), and permanently and seasonally flooded non-agricultural wetlands used for resident and migratory waterfowl. Mercury biogeochemistry was examined in 0-2 cm surface sediment, as a function of habitat type, wetland management, and agricultural practices during the 2007-08 crop year. In permanently flooded wetlands, MeHg concentrations varied within a narrow range (ca. 0.5-1.5 ng/g dry wt) throughout the study period. In contrast, the three types of agricultural fields had higher MeHg concentrations throughout the rice-growing season (June-Sept; ca. 1.5-3.5 ng/g), and exhibited the highest levels (ca. 3.3-6.3 ng/g) in the post-harvest winter period (Dec-Feb). Further, naturally dried sediment, sampled during July '08 from post-harvest drained fallow agricultural fields (prior to reflooding) had MeHg concentrations that were also quite elevated (3.1 +/- 1.5 ng/g). This suggests that the initial elevated concentrations of overlying water MeHg, sometimes measured soon after flooding previously dried fields, may be related to the release of MeHg formed during the previous wet season and trapped in dried sediment, as opposed to being MeHg newly produced by bacteria upon soil rewetting. These results indicate that the 'hot spots and hot moments' associated with MeHg production in this system are linked to hydrologic manipulations (wetting and drying) in the agricultural fields, and that the practice of post-harvest reflooding of rice fields, to promote rice straw decomposition during the fall and winter, may stimulate microbial activity associated with increased MeHg production during that period.

[Effects of Water and Nitrogenous Fertilizer Coupling on CH4 and N2O Emission from Double-Season Rice Paddy Field].

PubMed

Fu, Zhi-qiang; Long, Pan; Liu, Yi-yi; Zhong, Juan; Long, Wen-fei

2015-09-01

To provide support for the efficient use of water and fertilizer technology to double-season rice cultivation, water and fertilizer coupling mode was applied in this research, including two irrigation methods and four N levels. The irrigation methods were flood irrigation and intermittent irrigation, while four N levels were high-N, middle-N, low-N and none-N. Field experiment was conducted to study the effect of water and fertilizer coupling mode on CH4 and N2O emission. The results showed that the accumulated CH4 emissions were significantly reduced by intermittent irrigation, in comparison with flood irrigation, the reduction in early rice season were from 13. 18 kg.hm-2 to 87. 90 kg.hm-2, and were from 74. 48 kg.hm-2 to 131. 07 kg.hm-2 in late rice season, with a rate of 24. 4% -67. 4% and 42. 5% -65. 5% respectively; whereas the accumulated N20 emissions were increased, the increment were from 0. 03 kg.hm-2 to 0. 24 kg.hm-2 in early rice season and from 0. 35 kg.hm-2 to 1. 53 kg.hm-2 in late rice season when compared flood irrigation, increased by 6.2% -18. 3% and 40.2% - 80.9% respectively. On the whole, intermittent irrigation reduces the warming potential of greenhouse gases (GWP), which were decreased by 18. 8% to 58. 6% in early rice season and by 34. 4% to 60. 1% in late rice season, and the reduction of total GWP were from 2 388 to 4 151 kg. hm-2 (CO2 eq), with a rate of 41% -54% . Through correlation analysis it found that CH4 emissions from soil were significantly related with soil solution Eh and solution CH4 concentration. In comparison with the flood irrigation, the application of intermittent irrigation in double-season rice cultivation was conducive to CH4 reduction, though the increase came in N2O, but the GWPs were significantly reduced. Comprehensively, intermittent irrigation matching with middle-N is more benefit to double-season rice cultivation.

Substantial N2O emission during the initial period of the wheat season due to the conversion of winter-flooded paddy to rice-wheat rotation

NASA Astrophysics Data System (ADS)

Zhou, Wei; Lin, Shan; Wu, Lei; Zhao, Jingsong; Wang, Milan; Zhu, Bo; Mo, Yongliang; Hu, Ronggui; Chadwick, Dave; Shaaban, Muhammad

2017-12-01

Winter-flooded paddy is a typical rice-based cropping system to conserve water for the next rice growing season. Conversion of winter-flooded paddy to rice-wheat rotation has been widely adopted with the development of the water conservation infrastructure and the government's encouragement of winter agriculture in China in recent decades. However, the effects of this conversion on N2O emission are still not clear. Three winter-flooded paddy fields were studied in a split-plot design. One-half of each field was converted to rice-wheat rotation (RW), and the other half remained winter-flooded as rice-fallow (RF). Each plot of RW and RF was further divided into four subplots: three subplots for conventional N fertilizer application (RW-NC and RF-NC) and one for unfertilized treatment (RW-N0 and RF-N0). Conversion of RF-NC to RW-NC increased the N2O emission up to 6.6-fold in the first year and 4.4-fold in the second year. Moreover, N2O emissions for the entire wheat season were 1.74-3.74 kg N ha-1 and 0.24-0.31 kg N ha-1 from RW-NC and RW-N0, respectively, and accounted for 78%-94% and 78%-97% of the total annual amount. N2O emitted during the first 11-21 days of the wheat season from RW-NC was 1.48-3.28 kg N ha-1 and that from RW-N0 was 0.14-0.17 kg N ha-1, which contributed to 66%-82% and 45%-71% of the total annual amount, respectively. High N2O fluxes occurred when the soil water-filled pore space (WFPS) was in the range of 68%-72% and the ratio of available carbon to nitrogen in the soil was <1.42. The contribution of WFPS and dissolved organic carbon (DOC) explained most of the variation of the N2O fluxes compared with the other measured environmental and soil factors. These findings suggest that the conversion of winter-flooded paddy to rice-wheat rotation increased N2O emissions that could be mitigated by controlling the soil moisture and ratio of available soil carbon to nitrogen.

Changes of paddy rice planting areas in Northeastern Asia from 1986 to 2014 based on Landsat data

NASA Astrophysics Data System (ADS)

Dong, J.; Xiao, X.; Kou, W.; Qin, Y.; Wang, J.; Zhang, G.; Jin, C.; Zhou, Y.; Menarguez, M. A.; Moore, B., III

2014-12-01

Paddy rice is an important cereal crop and main grain source for more than half of the global human population. However, knowledge about its area and spatial pattern is still limited due to large changes in agriculture in different regions; for example, higher latitude areas underwent increase (e.g., northeastern China) and decrease (e.g., South Korea) of paddy rice planting areas due to climatic warming, urbanization and other drivers. It is necessary to track paddy rice planting area changes in these regions in the past decades. We developed a pixel- and phenology-based image analysis system, Landsat-RICE, to map the paddy rice by using Landsat imagery. The algorithm was based on the unique physical and spectral characteristics of paddy rice fields during the flooding and transplanting phases. First, Landsat images are preprocessed and time series vegetation indices (NDVI, EVI, and LSWI) are generated. Second, MODIS Land Surface Temperature (LST) data were used to define thermal plant growing season (0 oC, 5 oC and 10 oC), which provides a guide for selection of Landsat images within the period of flooding and transplanting. Third, several non-cropland land cover maps (e.g., permanent water bodies, built-up and barren lands, sparsely vegetated lands, and evergreen vegetation) are produced through analysis of Landsat-based vegetation indices within the plant growing season and combined as a mask. Fourthly, vegetation index data within the time window of flooded and rice transplanting were analyzed to identify flood/transplanting signals. Finally, the maps of paddy rice planting areas were generated through overlying the results from Step 3 and 4. Paddy rice planting area changes were investigated in some hotspots of Northeastern Asia from 1986 to 2014 at 30-m spatial resolution and 5-year interval. This study has demonstrated that our newly developed Landsat-Rice system is robust and effective for tracking paddy rice changes in cold temperate and temperate zones.

Effects of water management practices on residue decomposition and degradation of Cry1Ac protein from crop-wild Bt rice hybrids and parental lines during winter fallow season.

PubMed

Xiao, Manqiu; Dong, Shanshan; Li, Zhaolei; Tang, Xu; Chen, Yi; Yang, Shengmao; Wu, Chunyan; Ouyang, Dongxin; Fang, Changming; Song, Zhiping

2015-12-01

Rice is the staple diet of over half of the world's population and Bacillus thuringiensis (Bt) rice expressing insecticidal Cry proteins is ready for deployment. An assessment of the potential impact of Bt rice on the soil ecosystem under varied field management practices is urgently required. We used litter bags to assess the residue (leaves, stems and roots) decomposition dynamics of two transgenic rice lines (Kefeng6 and Kefeng8) containing stacked genes from Bt and sck (a modified CpTI gene encoding a cowpea trypsin inhibitor) (Bt/CpTI), a non-transgenic rice near-isoline (Minghui86), wild rice (Oryza rufipogon) and crop-wild Bt rice hybrid under contrasting conditions (drainage or continuous flooding) in the field. No significant difference was detected in the remaining mass, total C and total N among cultivars under aerobic conditions, whereas significant differences in the remaining mass and total C were detected between Kefeng6 and Kefeng8 and Minghui86 under the flooded condition. A higher decomposition rate constant (km) was measured under the flooded condition compared with the aerobic condition for leaf residues, whereas the reverse was observed for root residues. The enzyme-linked immunosorbent assay (ELISA), which was used to monitor the changes in the Cry1Ac protein in Bt rice residues, indicated that (1) the degradation of the Cry1Ac protein under both conditions best fit first-order kinetics, and the predicted DT50 (50% degradation time) of the Cry1Ac protein ranged from 3.6 to 32.5 days; (2) the Cry1Ac protein in the residue degraded relatively faster under aerobic conditions; and (3) by the end of the study (~154 days), the protein was present at a low concentration in the remaining residues under both conditions. The degradation rate constant was negatively correlated with the initial carbon content and positively correlated with the initial Cry1Ac protein concentration, but it was only correlated with the mass decomposition rate constants under the flooded condition. No Cry1Ac protein was detected in the soils surrounding the buried residue. Our results did not reveal any evidence that the stacked genes (Bt/CpTI) or the presence of the Cry1Ac protein influenced the decomposition dynamics of the rice residues. Furthermore, our results suggested that field drainage after residue incorporation would promote Cry1Ac protein degradation. Copyright © 2015 Elsevier Inc. All rights reserved.

Effects of landscape features on waterbird use of rice fields

USGS Publications Warehouse

King, S.; Elphick, C.S.; Guadagnin, D.; Taft, O.; Amano, T.

2010-01-01

Literature is reviewed to determine the effects of landscape features on waterbird use of fields in regions where rice (Oryza sativa) is grown. Rice-growing landscapes often consist of diverse land uses and land cover, including rice fields, irrigation ditches, other agricultural fields, grasslands, forests and natural wetlands. Numerous studies indicate that local management practices, such as water depth and timing of flooding and drawdown, can strongly influence waterbird use of a given rice field. However, the effects of size and distribution of rice fields and associated habitats at a landscape scale have received less attention. Even fewer studies have focused on local and landscape effects simultaneously. Habitat connectivity, area of rice, distance to natural wetlands, and presence and distance to unsuitable habitat can be important parameters influencing bird use of rice fields. However, responses to a given landscape vary with landscape structure, scale of analysis, among taxa and within taxa among seasons. A lack of multi-scale studies, particularly those extending beyond simple presence and abundance of a given species, and a lack of direct tests comparing the relative importance of landscape features with in-field management activities limits understanding of the importance of landscape in these systems and hampers waterbird conservation and management.

Soil and nutrient retention in winter-flooded ricefields with implications for watershed management

USGS Publications Warehouse

Manley, S.W.; Kaminski, R.M.; Rodrigue, P.B.; Dewey, J.C.; Schoenholtz, S.H.; Gerard, P.D.; Reinecke, K.J.

2009-01-01

The ability of water resources to support aquatic life and human needs depends, in part, on reducing nonpoint source pollution amid contemporary agricultural practices. Winter retention of shallow water on rice and other agricultural fields is an accepted management practice for wildlife conservation; however, soil and water conservation benefits are not well documented. We evaluated the ability of four post-harvest ricefield treatment combinations (stubble-flooded, stubble-open, disked-flooded and disked-open) to abate nonpoint source exports into watersheds of the Mississippi Alluvial Valley. Total suspended solid exports were 1,121 kg ha-1 (1,000 lb ac-1) from disked-open fields where rice stubble was disked after harvest and fields were allowed to drain, compared with 35 kg ha-1 (31 lb ac-1) from stubble-flooded fields where stubble was left standing after harvest and fields captured rainfall from November 1 to March 1. Estimates of total suspended solid exports from ricefields based on Landsat imagery and USDA crop data are 0.43 and 0.40 Mg km-2 day-1 in the Big Sunflower and L'Anguille watersheds, respectively. Estimated reductions in total suspended solid exports from ricefields into the Big Sunflower and L'Anguille water-sheds range from 26% to 64% under hypothetical scenarios in which 65% to 100% of the rice production area is managed to capture winter rainfall. Winter ricefield management reduced nonpoint source export by decreasing concentrations of solids and nutrients in, and reducing runoff volume from, ricefields in the Mississippi Alluvial Valley.

Amazon river flow regime and flood recessional agriculture: Flood stage reversals and risk of annual crop loss

NASA Astrophysics Data System (ADS)

Coomes, Oliver T.; Lapointe, Michel; Templeton, Michael; List, Geneva

2016-08-01

The annual flood cycle is an important driver of ecosystem structure and function in large tropical rivers such as the Amazon. Riparian peasant communities rely on river fishing and annual floodplain agriculture, closely adapted to the recession phase of the flood pulse. This article reports on a poorly documented but important challenge facing farmers practicing flood recessional agriculture along the Amazon river: frequent, unpredictable stage reversals (repiquetes) which threaten to ruin crops growing on channel bars. We assess the severity of stage reversals for rice production on exposed river mud bars (barreales) near Iquitos, Peru. Crop loss risk is estimated based on a quantitative analysis of 45 years of daily Amazon stage data and field data from floodplain communities nearby in the Muyuy archipelago, upstream of Iquitos. Rice varieties selected, elevations of silt rich bars where rice is sown, as well as planting and harvest dates are analyzed in the light of the timing, frequencies and amplitudes of observed stage reversals that have the potential to destroy growing rice. We find that unpredictable stage reversals can produce substantial crop losses and shorten significantly the length of average growing seasons on lower elevation river bars. The data reveal that local famers extend planting down to lower bar elevations where the mean probabilities of re-submergence before rice maturity (due to reversals) approach 50%, below which they implicitly consider that the risk of crop loss outweighs the potential reward of planting.

Mercury cycling in agricultural and managed wetlands: a synthesis of methylmercury production, hydrologic export, and bioaccumulation from an integrated field study

USGS Publications Warehouse

Windham-Myers, Lisamarie; Fleck, Jacob A.; Ackerman, Joshua T.; Marvin-DiPasquale, Mark C.; Stricker, Craig A.; Heim, Wesley A.; Bachand, Philip A.M.; Eagles-Smith, Collin A.; Gill, Gary; Stephenson, Mark; Alpers, Charles N.

2014-01-01

With seasonal wetting and drying, and high biological productivity, agricultural wetlands (rice paddies) may enhance the conversion of inorganic mercury (Hg(II)) to methylmercury (MeHg), the more toxic, organic form that biomagnifies through food webs. Yet, the net balance of MeHg sources and sinks in seasonal wetland environments is poorly understood because it requires an annual, integrated assessment across biota, sediment, and water components. We examined a suite of wetlands managed for rice crops or wildlife during 2007–2008 in California's Central Valley, in an area affected by Hg contamination from historic mining practices. Hydrologic management of agricultural wetlands for rice, wild rice, or fallowed — drying for field preparation and harvest, and flooding for crop growth and post-harvest rice straw decay — led to pronounced seasonality in sediment and aqueous MeHg concentrations that were up to 95-fold higher than those measured concurrently in adjacent, non-agricultural permanently-flooded and seasonally-flooded wetlands. Flooding promoted microbial MeHg production in surface sediment of all wetlands, but extended water residence time appeared to preferentially enhance MeHg degradation and storage. When incoming MeHg loads were elevated, individual fields often served as a MeHg sink, rather than a source. Slow, horizontal flow of shallow water in the agricultural wetlands led to increased importance of vertical hydrologic fluxes, including evapoconcentration of surface water MeHg and transpiration-driven advection into the root zone, promoting temporary soil storage of MeHg. Although this hydrology limited MeHg export from wetlands, it also increased MeHg exposure to resident fish via greater in situ aqueous MeHg concentrations. Our results suggest that the combined traits of agricultural wetlands — slow-moving shallow water, manipulated flooding and drying, abundant labile plant matter, and management for wildlife — may enhance microbial methylation of Hg(II) and MeHg exposure to local biota, as well as export to downstream habitats during uncontrolled winter-flow events.

Mercury cycling in agricultural and managed wetlands: a synthesis of methylmercury production, hydrologic export, and bioaccumulation from an integrated field study.

PubMed

Windham-Myers, Lisamarie; Fleck, Jacob A; Ackerman, Joshua T; Marvin-DiPasquale, Mark; Stricker, Craig A; Heim, Wesley A; Bachand, Philip A M; Eagles-Smith, Collin A; Gill, Gary; Stephenson, Mark; Alpers, Charles N

2014-06-15

With seasonal wetting and drying, and high biological productivity, agricultural wetlands (rice paddies) may enhance the conversion of inorganic mercury (Hg(II)) to methylmercury (MeHg), the more toxic, organic form that biomagnifies through food webs. Yet, the net balance of MeHg sources and sinks in seasonal wetland environments is poorly understood because it requires an annual, integrated assessment across biota, sediment, and water components. We examined a suite of wetlands managed for rice crops or wildlife during 2007-2008 in California's Central Valley, in an area affected by Hg contamination from historic mining practices. Hydrologic management of agricultural wetlands for rice, wild rice, or fallowed - drying for field preparation and harvest, and flooding for crop growth and post-harvest rice straw decay - led to pronounced seasonality in sediment and aqueous MeHg concentrations that were up to 95-fold higher than those measured concurrently in adjacent, non-agricultural permanently-flooded and seasonally-flooded wetlands. Flooding promoted microbial MeHg production in surface sediment of all wetlands, but extended water residence time appeared to preferentially enhance MeHg degradation and storage. When incoming MeHg loads were elevated, individual fields often served as a MeHg sink, rather than a source. Slow, horizontal flow of shallow water in the agricultural wetlands led to increased importance of vertical hydrologic fluxes, including evapoconcentration of surface water MeHg and transpiration-driven advection into the root zone, promoting temporary soil storage of MeHg. Although this hydrology limited MeHg export from wetlands, it also increased MeHg exposure to resident fish via greater in situ aqueous MeHg concentrations. Our results suggest that the combined traits of agricultural wetlands - slow-moving shallow water, manipulated flooding and drying, abundant labile plant matter, and management for wildlife - may enhance microbial methylation of Hg(II) and MeHg exposure to local biota, as well as export to downstream habitats during uncontrolled winter-flow events. Published by Elsevier B.V.

Effects of water management on arsenic and cadmium speciation and accumulation in an upland rice cultivar.

PubMed

Hu, Pengjie; Ouyang, Younan; Wu, Longhua; Shen, Libo; Luo, Yongming; Christie, Peter

2015-01-01

Pot and field experiments were conducted to investigate the effects of water regimes on the speciation and accumulation of arsenic (As) and cadmium (Cd) in Brazilian upland rice growing in soils polluted with both As and Cd. In the pot experiment constant and intermittent flooding treatments gave 3-16 times higher As concentrations in soil solution than did aerobic conditions but Cd showed the opposite trend. Compared to arsenate, there were more marked changes in the arsenite concentrations in the soil solution as water management shifted, and therefore arsenite concentrations dominated the As speciation and bioavailability in the soil. In the field experiment As concentrations in the rice grains increased from 0.14 to 0.21 mg/kg while Cd concentrations decreased from 0.21 to 0.02 mg/kg with increasing irrigation ranging from aerobic to constantly flooding conditions. Among the various water regimes the conventional irrigation treatment produced the highest rice grain yield of 6.29 tons/ha. The As speciation analysis reveals that the accumulation of dimethylarsinic acid (from 11.3% to 61.7%) made a greater contribution to the increase in total As in brown rice in the intermittent and constant flooding treatments compared to the intermittent-aerobic treatment. Thus, water management exerted opposite effects on Cd and As speciation and bioavailability in the soil and consequently on their accumulation in the upland rice. Special care is required when irrigation regime methods are employed to mitigate the accumulation of metal(loid)s in the grain of rice grown in soils polluted with both As and Cd. Copyright © 2014. Published by Elsevier B.V.

Depletion of rice as food of waterfowl wintering in the Mississippi Alluvial Valley

USGS Publications Warehouse

Greer, Danielle M.; Dugger, Bruce D.; Reinecke, Kenneth J.; Petrie, Mark J.

2009-01-01

Waterfowl habitat conservation strategies in the Mississippi Alluvial Valley (MAV) and several other wintering areas assume carrying capacity is limited by available food, and increasing food resources is an effective conservation goal. Because existing research on winter food abundance and depletion is insufficient to test this hypothesis, we used harvested rice fields as model foraging habitats to determine if waste rice seed is depleted before spring migration. We sampled rice fields (n = 39 [winter 2000-2001], n = 69 [2001-2002]) to estimate seed mass when waterfowl arrived in late autumn and departed in late winter. We also placed exclosures in subsets of fields in autumn (n = 8 [2000-2001], n = 20 [2001-2002]) and compared seed mass inside and outside exclosures in late winter to estimate rice depletion attributable to waterfowl and other processes. Finally, we used an experiment to determine if the extent of rice depletion differed among fields of varying initial abundance and if the seed mass at which waterfowl ceased foraging or abandoned fields differed from a hypothesized giving-up value of 50 kg/ha. Mean seed mass was greater in late autumn 2000 than 2001 (127.0 vs. 83.9 kg/ha; P = 0.018) but decreased more during winter 2000-2001 than 2001-2002 (91.3 vs. 55.7 kg/ha) and did not differ at the end of winter (35.8 vs. 28.3 kg/ha; P = 0.651). Assuming equal loss to deterioration inside and outside exclosures, we estimated waterfowl consumed 61.3 kg/ha (48.3%) of rice present in late autumn 2000 and 21.1 kg/ha (25.1%) in 2001. When we manipulated late-autumn rice abundance, mean giving-up mass of rice seed was similar among treatments (48.7 kg/ha; P = 0.205) and did not differ from 50 kg/ha (P = 0.726). We integrated results by constructing scenarios in which waterfowl consumed rice at different times in winter, consumption and deterioration were competing risks, and consumption occurred only above 50 kg/ha. Results indicated waterfowl likely consumed available rice soon after fields were flooded and the amount consumed exceeded our empirical estimates but was -48% (winters pooled) of rice initially present. We suggest 1) using 50 kg/ha as a threshold below which profitability limits waterfowl feeding in MAV rice fields; 2) reducing the current estimate (130 kg/ha) of rice consumed in harvested fields to 47.1 kg/ha; and 3) increasing available rice by increasing total area of fields managed, altering management practices (e.g., staggered flooding), and exploring the potential for producing second or ratoon rice crops for waterfowl.

Post-harvest field manipulations to conserve waste rice for waterfowl

USGS Publications Warehouse

Stafford, J.D.; Kaminski, R.M.; Reinecke, K.J.; Kurtz, M.E.; Manley, S.W.

2005-01-01

Rice seeds escaping collection by combines during harvest (hereafter, waste rice) provide quality forage for migrating and wintering waterfowl in the Lower Mississippi Alluvial Valley (MAV) and other rice growing regions in the United States. Recent sample surveys across the MAV have revealed abundance of waste rice in fields declined an average of 71% between harvest and late autumn. Thus, we evaluated the ability of common post-harvest, field-management practices to conserve waste rice for waterfowl until early winter via controlled experiments in Mississippi rice test plots in 2001 and 2003 and analyses of data from MAV-wide surveys of waste rice in rice production fields in 2000-2002. Our experiments indicated test plots with burned rice stubble that were not flooded during autumn contained more waste rice than other treatments in 2001 (P?0.10). Waste-rice abundance in test plots did not differ among postharvest treatments in 2003 (P = 0.97). Our analyses of data from the MAV sample surveys did not detect differences in abundance of waste rice among fields burned, rolled, disked, or left in standing stubble post-harvest (P?0.04; Bonferroni corrected critical ( a= 0.017). Because results from test-plot experiments were inconclusive, we based our primary inference regarding best post-harvest treatments on patterns of rice abundance identified from the MAV surveys and previously documented environmental and agronomic benefits of managing harvested rice fields for wintering waterfowl. Therefore, we recommend leaving standing stubble in rice fields after harvest as a preliminary beneficial management practice. We suggest future research evaluate potential of postharvest practices to conserve waste rice for waterfowl and reduce straw in production rice fields managed for wintering waterfowl throughout the MAV.

Mercury methylation, export and bioaccumulation in rice agriculture - model results from comparative and experimental studies in 3 regions of the California Delta, USA

NASA Astrophysics Data System (ADS)

Windham-Myers, L.; Fleck, J.; Eagles-Smith, C.; Ackerman, J.

2013-12-01

Seasonally flooded wetland ecosystems are often poised for mercury (Hg) methylation, thus becoming sources of methylmercury (MeHg) to in situ and downstream biota. The seasonal flooding associated with cultivation of rice (Oryza sativa) also generates MeHg, which may be stored in sediment or plants, bioaccumulated into fauna, degraded or exported, depending on hydrologic and seasonal conditions. While many U.S. waters are regulated for total Hg concentrations based on fish targets, California's Sacramento-San Joaquin Delta (Delta) will soon implement the first MeHg total maximum daily load (TMDL) control program. Since 2007, a conceptual model (DRERIP-MCM) and several ecosystem-level studies have been advanced to better understand the mechanisms behind Hg methylation, export and bioaccumulation within Delta wetlands, including rice agriculture. Three Delta rice-growing regions (Yolo Bypass, Cosumnes River, Central Delta) of varied soil characteristics, mining influences and hydrology, were monitored over full crop years to evaluate annual MeHg dynamics. In addition to fish tissue Hg accumulation, a broad suite of biogeochemical and hydrologic indices were assessed and compared between wetland types, seasons, and regions. In general, Delta rice fields were found to export MeHg during the post-harvest winter season, and promote MeHg uptake in fish and rice grain during the summer growing season. As described in a companion presentation (Eagles-Smith et al., this session), the experimental Cosumnes River study suggests that rice-derived dissolved organic carbon (DOC) fuels MeHg production and uptake into aquatic foodwebs. Explicit DRERIP-MCM linkages for the role of rice-DOC in MeHg production, export and bioaccumulation were verified across two summers (2011, 2012): rice biomass and root productivity influenced porewater DOC availability and microbial processes, which drove sediment MeHg production and flux to surface water, promoting MeHg bioaccumulation in fish. Linkages from plant biomass to fish Hg concentrations were less evident in non-agricultural wetlands (seasonal or permanent flooding), where aromatic DOC and physical controls (e.g. hydrology, photodemethylation) appeared to have a greater role. Winter rice straw management had no measurable impact on summer MeHg dynamics, but wetland data suggest that the inclusion of deepwater cells within fields may reduce MeHg exposure. As concern grows over MeHg concentrations in rice grains, research on cultivars and field management is expanding in China, but ecosystem-level studies remain rare. Broader global monitoring and research are needed to address these pathways of Hg exposure given the global expansion of rice agriculture and ongoing atmospheric Hg deposition. Dense root and canopy structure of California rice fields (Oryza sativa), August 2007

Static Vented Chamber and Eddy Covariance Methane Flux Comparisons in Mid-South US Rice

NASA Astrophysics Data System (ADS)

Reba, M. L.; Fong, B.; Adviento-Borbe, A.; Runkle, B.; Suvocarev, K.; Rival, I.

2017-12-01

Rice cultivation contributes higher amounts of GHG emissions (CO2 and CH4) due to flooded field conditions. A comparison between eddy covariance and static vented flux chamber measurement techniques is presented. Rice GHG emissions originating from plot level chambers may not accurately describe the aggregate effects of all the soil and micrometeorological variations across a production field. Eddy covariance (EC) is a direct, integrated field measurement of field scale trace gases. Flux measurements were collected in NE Arkansas production size rice fields (16 ha, 40 ac) during the 2015 and 2016 production seasons (June-August) in continuous flood (CF) irrigation. The study objectives included quantifying the difference between chamber and EC measurements, and categorizing flux behavior to growth stage and field history. EC daily average emissions correlated with chamber measurements (R2=0.27-0.54) more than average from 09:00-12:00 which encompassed chamber measurement times (R2=0.23-0.32). Maximum methane emissions occurred in the late afternoon from 14:00-18:00 which corresponded with maximum soil heat flux and air temperature. The total emissions from the study fields ranged from 27-117 kg CH4-C ha-1 season-1. The emission profile was lower in 2015, most likely due to higher rainfall and cooler temperatures during the growing season compared to 2016. These findings improve our understanding of GHG emissions at the field scale under typical production practices and validity of chamber and EC flux measurement techniques.

Dissipation of clomazone, imazapyr and imazapic herbicides in paddy water under two rice flood management regimes

USDA-ARS?s Scientific Manuscript database

Pesticides are frequently detected in rivers, lakes and groundwater sources in regions where rice is cultivated in Brazil. The transport of these compounds to water sources is strongly related to the irrigation system adopted in paddy fields. However, information on the dissipation of clomazone, ima...

Understanding the physiological and molecular mechanisms of rice-microbial interactions that produce methane

USDA-ARS?s Scientific Manuscript database

The second most abundant greenhouse gas, methane, is ~25 times more potent in global warming potential than carbon dioxide, and 7-17% of atmospheric methane comes from flooded rice fields. Methane emissions can be greatly reduced by using alternate wetting and drying irrigation management and/or cul...

Potential effects of earthworm activity on C and N dynamics in tropical paddy soil

NASA Astrophysics Data System (ADS)

John, Katharina; Zaitsev, Andrey S.; Wolters, Volkmar

2016-04-01

Earthworms are involved in key ecosystem processes and are generally considered important for sustainable crop production. However, their provision of essential ecosystem services and contribution to tropical soil carbon and nitrogen balance in rice-based agroecosystems are not yet completely understood. We carried out two microcosm experiments to quantify the impact of a tropical earthworm Pheretima sp. from the Philippines on C and N turnover in rice paddy soils. First one was conducted to understand the modulation impact of soil water saturation level and nitrogen fertilizer input intensity on C and N cycles. The second one focused on the importance of additional organic matter (rice straw) amendment on the earthworm modulation of mineralization in non-flooded conditions. We measured CO2, CH4 (Experiments 1 and 2) and N2O evolution (Experiment 2) from rice paddy soil collected at the fields of the International Rice Research Institute (Philippines). Further we analysed changes in soil C and N content as well as nutrient loss via leaching induced by earthworms (Experiment 2). Addition of earthworms resulted in the strong increase of CH4 release under flooded conditions as well as after rice straw amendment. Compared to flooded conditions, earthworms suppressed the distinct CO2 respiration maximum at intermediate soil water saturation levels. In the first few days after the experiment establishment (Experiment 1) intensive nitrogen application resulted in the suppression of CO2 emission by earthworms at non-flooded soil conditions. However, at the longer term perspective addressed in the second experiment (30 days) earthworm activity rather increased average soil respiration under intensive fertilization or rice straw amendment. The lowest N2O release rates were revealed in the microcosms with earthworm and straw treatments. The combined effect of N fertilizer and straw addition to microcosms resulted in the increased leachate volume due to earthworm bioturbation activity. The mean relative C loss with leaching was increased by earthworms under intensive fertilization and consequently resulting soil C content in the end of Experiment 2 decreased. N concentration in the leachate remained unaffected by earthworms although the remaining N content in soil with straw application and earthworm treatment was significantly higher than in the control. Our results showed that the potential role of earthworms in C-stabilization is confined to moderately irrigated soils that allow high earthworm activity. Earthworm effects on C and N release under non-flooded conditions were largely modulated by the application of N fertilizer (urea) and by the amendment of rice straw. Our findings suggest that the presence of earthworms significantly affect C and N budgets in rice paddy soil, especially in the intensively managed non-flooded fields. In the short term perspective they sequester C and N loss from soil. However, in the longer term (ca. 30 days) this sequestration effect remains significant only for nitrogen under the straw application treatment. The study was supported by ICON project within the DFG-Research Unit FOR 1701.

Water-saving technologies affect the grain characteristics and recovery of fine-grain rice cultivars in semi-arid environment.

PubMed

Jabran, Khawar; Riaz, Muhammad; Hussain, Mubshar; Nasim, Wajid; Zaman, Umar; Fahad, Shah; Chauhan, Bhagirath Singh

2017-05-01

Growing rice with less water is direly needed due to declining water sources worldwide, but using methods that require less water inputs can have an impact on grain characteristics and recovery. A 2-year field study was conducted to evaluate the impact of conventionally sown flooded rice and low-water-input rice systems on the grain characteristics and recovery of fine rice. Three fine grain rice cultivars-Super Basmati, Basmati 2000, and Shaheen Basmati-were grown under conventional flooded transplanted rice (CFTR), alternate wetting and drying (AWD), and aerobic rice systems. Grain characteristics and rice recovery were significantly influenced by different water regimes (production systems). Poor milling, including the lowest percentage of brown (head) rice (65.3%) and polished (white) rice (64.2-66.9%) and the highest percentage of broken brown rice (10.2%), husk (24.5%-26.3%), polished broken rice (24.7%), and bran (11.0-12.5%), were recorded in the aerobic rice system sown with Shaheen Basmati. With a few exceptions, cultivars sown in CFTR were found to possess a higher percentage of brown (head) and polished (white) rice and they had incurred the least losses in the form of brown broken rice, husk, polished broken rice, and bran. In conclusion, better grain quality and recovery of rice can be attained by growing Super Basmati under the CFTR system. Growing Shaheen Basmati under low-water-input systems, the aerobic rice system in particular, resulted in poor grain characteristics tied with less rice recovery.

[Effects of intermittent irrigation on ecological and physiological water requirement of rice in north China].

PubMed

Wang, Xiaoying; Liang, Wenju; Wen, Dazhong

2004-10-01

The ecological and physiological water requirement of rice was studied in a paddy field of north China, and the field experiment was conducted at Shenyang Experimental Station of Ecology, Chinese Academy of Sciences. Under continuous flooding irrigation (CSF) and intermittent irrigation (IT) conditions, the evapotranspiration and soil evaporation of paddy fields were measured by non-weighing lysimeters and micro-lysimeters, respectively. The results showed that compared with continuous flooding irrigation, the transpiration under intermittent irrigation condition was not significantly reduced, but 16% and 24% of water amounts were reduced by decreasing the water losses through soil water evaporation and percolation, respectively. The water use efficiency of intermittent irrigation was increased 10%, without any adverse effects on biomass and grain yield of rice. Although the amount of water requirement under IT treatment was reduced significantly compared with CSF treatment, about 60% of total water requirement was still lost through deep percolation. Based on the results obtained, the corresponding countermeasures to reduce the amounts of soil water evaporation and percolation and to increase the water use efficiency were put forward in this paper.

Green-house gas emissions from rice fields under different water management

NASA Astrophysics Data System (ADS)

Lagomarsino, Alessandra; Elio Agnelli, Alessandro; Ferrara, Rossana Monica; Adviento-Borbe, Maria Arlene; Linquist, Bruce; Gavina, Giacomo; Ravaglia, Stefano

2013-04-01

During 2012 season, two rice fields have been selected in Italy (Cantaglia farm, Bologna province) and subjected to different water management: one under continuous flooding (WET) and the other under alternate wetting and drying (AWD). In AWD, re-flushing occurred in order to maintain water field capacity over 60 %. Two rice varieties (one commonly cultivated in Italy and one variety from the S.I.S. germoplasm collection) have been considered under WET treatment (Gladio and Zhen Long 13 - abbreviated as ZL13), while only Gladio under AWD. Green house gases (GHGs) sampling have been performed weekly or bi-weekly throughout the growing season. Soluble organic carbon (C), soluble nitrogen (N) and nitrates have been collected through piezometers. Soil sampling have been performed at the beginning and at the end of the growing season and total organic C (TOC), total N (TN), C/N ratio of soil organic matter (SOM), bulk density and water holding capacity were measured. At the end of the growing season rice above- and below-ground biomass have been sampled and C and N content of stem, grain and roots were measured. Methane (CH4) emissions showed a clear trend, following water availability in soils. An initial peak after the first flooding was observed in all soils, while after the second flooding CH4 was emitted only in the WET treatment. Further flooding events in AWD soil did not determine CH4 emissions during the vegetative season. Overall, in 2012 growing season a 98 % reduction of CH4 emissions in AWD soil was observed. In the WET treatment, no significant variations were observed between the two varieties, although on average ZL13 showed lower rates of CH4 emissions. Two peaks of nitrous oxide (N2O) emissions were observed: the first after the initial flooding in all soils; the second one, much greater, 14 days after the fertilization only in AWD soils. These two peaks accounted for 92 % of total N2O emissions in 2012 rice season. Overall, in 2012 growing season N2O emissions were five-fold greater in AWD with respect to WET soils. No significant differences were observed between the two varieties, although ZL13 showed on average lower emission rates. The large difference between the two water management systems indicates that more work is needed to optimize the AWD cultivation method (variety, N management, water management) under Italian conditions before it can be introduced as an instrument to reduce climate impact of the Italian rice crop.

First record of epizootics in the ocola skipper, Panoquina sp. (Lepidopera: Hesperiidae), caused by Isaria tenuipes in flooded rice fields of Central Brazil

USDA-ARS?s Scientific Manuscript database

Fungal entomopathogens serve an important ecological function by naturally regulating insect pest populations in agricultural crops worldwide. We report the first occurrence of an epizootic of the ascomycetous fungus Isaria tenuipes on rice skipper Panoquina sp. (Lepidoptera: Hesperiidae), a major p...

Quantifying changes in flooding and habitats in the Tonle Sap Lake (Cambodia) caused by water infrastructure development and climate change in the Mekong Basin.

PubMed

Arias, Mauricio E; Cochrane, Thomas A; Piman, Thanapon; Kummu, Matti; Caruso, Brian S; Killeen, Timothy J

2012-12-15

The economic value of the Tonle Sap Lake Floodplain to Cambodia is arguably among the highest provided to a nation by a single ecosystem around the world. Nonetheless, the Mekong River Basin is changing rapidly due to accelerating water infrastructure development (hydropower, irrigation, flood control, and water supply) and climate change, bringing considerable modifications to the flood pulse of the Tonle Sap Lake in the foreseeable future. This paper presents research conducted to determine how the historical flooding regime, together with human action, influenced landscape patterns of habitats in the Tonle Sap Lake, and how these habitats might shift as a result of hydrological changes. Maps of water depth, annual flood duration, and flood frequency were created for recent historical hydrological conditions and for simulated future scenarios of water infrastructure development and climate change. Relationships were then established between the historical flood maps and land cover, and these were subsequently applied to assess potential changes to habitat cover in future decades. Five habitat groups were clearly distinguishable based on flood regime, physiognomic patterns, and human activity: (1) Open water, flooded for 12 months in an average hydrological year; (2) Gallery forest, with flood duration of 9 months annually; (3) Seasonally flooded habitats, flooded 5-8 months and dominated by shrublands and grasslands; (4) transitional habitats, flooded 1-5 months and dominated by abandoned agricultural fields, receding rice/floating rice, and lowland grasslands; and (5) Rainfed habitats, flooded up to 1 month and consisting mainly of wet season rice fields and village crops. It was found that water infrastructure development could increase the area of open water (+18 to +21%) and the area of rainfed habitats (+10 to +14%), while reducing the area covered with seasonally flooded habitats (-13 to -22%) and gallery forest (-75 to -83%). Habitat cover shifts as a result of climate change include a net increase of open water (2-21%), as well as a reduction of rainfed habitats by 2-5% and seasonally flooded habitats by 5-11%. Findings from this study will help guide on-going and future conservation and restoration efforts throughout this unique and critical ecosystem. Copyright © 2012 Elsevier Ltd. All rights reserved.

Nutrients levels in paddy soils and flood waters from Tagus-Sado basin: the impact of farming system

NASA Astrophysics Data System (ADS)

Santos, Erika S.; Abreu, Maria Manuela; Magalhães, Maria Clara; Viegas, Wanda; Amâncio, Sara; Cordovil, Cláudia

2017-04-01

Application of fertilizers for crops can contribute to nutrients surplus, namely nitrogen, in both groundwater and surface waters resulting in serious environmental problems. The impacts on water quality due to fertilizers are related to land management. In paddy fields using high amounts of water, the nutrient dynamic knowledge is essential to evaluate the impact of farming system. The aims of this study were to evaluate: i)nutrients levels in soils and floodwaters from rice cultivation in Tagus-Sado basin (Portugal); ii)the effect, under controlled conditions, of different irrigation techniques on nutrient enrichment of floodwaters from rice cultivation. Composite samples (n=24) of paddy soils (0-15 cm) and floodwaters were collected, during rice flooding period. In the field, pH and electrical conductivity (EC) were determined in waters. Soil pH, concentrations of Corganic, NPK and nutrients (Ca, Cu, Fe, Mg, Mn, Zn) in soils and floodwaters (nitrites, nitrates, phosphates) were determined. A mesocosm assay was performed in lysimeters with a paddy soil (pH: 5.6; g/kg- Ntotal: 2.0, Pextractable: 0.04, Kextractable: 0.6, Corganic: 35.5) and different irrigation techniques (n=3): a)flood; b)four floods per day (great water renewal); c)flood until rice flowering and then a normal superficial irrigation. Rice cultivation was done by transplant as in the field. Irrigation water come from a well. Same chemical characterization than in field assay were determined in floodwater and irrigation water. In field conditions, paddy soils had values of pH between 5.1 and 8.1 and a great fertility range (g/kg; Ntotal: 0.4‒2.2; Pextractable: 0.01‒0.2; Kextractable: 0.04‒0.7; Corganic: 6.5‒37.9). Total soil concentrations of Cu, Fe, and Zn in soils were in same range and below maximum admissible values for agriculture. Total soil concentrations of Ca, Mg and Mn, showed higher heterogeneity (g/kg; 1.2‒19.3, 7.6‒34.2 and 0.2‒1.5 respectively). Floodwaters presented pH ≈7 and, usually, EC>1 mS/cm (MRV‒maximum recommended value for irrigation water). Nitrites concentrations were <0.1 mg/L in floodwaters, while concentrations of nitrates (<2.4 mg/L), Cu (<2‒12.3 µg/L), Fe (<0.1‒0.9 mg/L) and Zn (0.04‒1.9 mg/L) were below MRV. The fertilizers used in rice cultivation did not seem to affect the water quality. Nitrates concentration in irrigation water of lysimeters (24 mg/L) was close to MVR for irrigation water. Intensive agriculture of corn surrounding the well can explain the greater nutrients concentrations, especially nitrates, nitrites and phosphates, in this water compared to water from river used for paddy fields irrigation. Independently of irrigation technique, nutrient concentrations in lysimeters floodwaters (except phosphates in some samples) were in same range of those in irrigation water from well. The nutrients excess in water seems not to be uptake by rice contributing to nutrient enrichment of nearby waters and soils. Studied paddy fields from Tejo-Sado basin are not a potential pollution source of nutrients. However, according mesocosm assay, the potential irrigation of paddy soils with water rich in nitrates can contribute to serious environmental risks. The authors are thankful to: Atlantic Meals for financial and sampling support, and NitroPortugal, H2020-TWINN-2015, EU coordination and support action n. 692331 funding.

Water regime-nitrogen fertilizer incorporation interaction: Field study on methane and nitrous oxide emissions from a rice agroecosystem in Harbin, China.

PubMed

Dong, Wenjun; Guo, Jia; Xu, Lijun; Song, Zhifeng; Zhang, Jun; Tang, Ao; Zhang, Xijuan; Leng, Chunxu; Liu, Youhong; Wang, Lianmin; Wang, Lizhi; Yu, Yang; Yang, Zhongliang; Yu, Yilei; Meng, Ying; Lai, Yongcai

2018-02-01

Water regime and nitrogen (N) fertilizer are two important factors impacting greenhouse gases (GHG) emission from paddy field, whereas their effects have not been well studied in cold region. In this study, we conducted a two-year field experiment to study the impacts of water regime and N fertilizer on rice yields and GHG emissions in Harbin, China, a cold region located in high latitudes. Our results showed that intermittent irrigation significantly decreased methane (CH 4 ) emission compared with continuous flooding, however, the decrement was far lower than the global average level. The N 2 O emissions were very small when flooded but peaked at the beginning of the disappearance of floodwater. The N fertilizer treatments increased CH 4 emissions at low level (75kgN/ha). But both CH 4 and N 2 O emissions were uninfluenced at the levels of 150kgN/ha and 225kgN/ha. Rice yields increased under intermittent irrigation and were highest at the level of 150kgN/ha. From our results, we recommended that the intermittent irrigation and 150kgN/ha as the ideal water regime-nitrogen fertilizer incorporation for this area to achieve low GHG emissions without impacting rice yields. Copyright © 2017. Published by Elsevier B.V.

Waste rice for waterfowl in the Mississippi Alluvial Valley

USGS Publications Warehouse

Stafford, J.D.; Kaminski, R.M.; Reinecke, K.J.; Manley, S.W.

2006-01-01

Flooded rice fields are important foraging habitats for waterfowl in the lower Mississippi Alluvial Valley (MAV). Waste rice previously was abundant in late autumn (140?492 kg/ha), but early planting and harvest dates in recent years may have increased losses of waste rice during autumn before waterfowl arrive. Research in Mississippi rice fields revealed waste-rice abundance decreased 79?99% during autumns 1995?1996. To determine if this trend existed throughout the MAV, we used multistage sampling (MSS) to estimate waste-rice abundance during September?December 2000?2002. Averaged over years, mean abundance of waste rice decreased 71% between harvest ((x) over bar = 271.0 kg/ha, CV = 13% n = 3 years) and late autumn ( (x) over bar = 78.4 kg/ha, CV = 15% n = 3). Among 15 models formulated to explain variation in rice abundance among fields and across years, the best model indicated abundance of waste rice in late autumn differed between harvester types (i.e., conventional > stripper header) and was positively related to initial waste-rice abundance after harvest. Because abundance of waste rice in late autumn was less than previous estimates in all 3 years, we concluded that waterfowl conservationists have overestimated carrying capacity of rice fields for wintering waterfowl by 52?83% and recommend 325 duck-use days/ha (DUDs) as a revised estimate. We suggest monitoring advances in rice harvest dates to determine when new surveys are warranted and recommend increased management of moist-soil wetlands to compensate for decreased rice abundance.

Root morphology, hydraulic conductivity and plant water relations of high-yielding rice grown under aerobic conditions.

PubMed

Kato, Yoichiro; Okami, Midori

2011-09-01

Increasing physical water scarcity is a major constraint for irrigated rice (Oryza sativa) production. 'Aerobic rice culture' aims to maximize yield per unit water input by growing plants in aerobic soil without flooding or puddling. The objective was to determine (a) the effect of water management on root morphology and hydraulic conductance, and (b) their roles in plant-water relationships and stomatal conductance in aerobic culture. Root system development, stomatal conductance (g(s)) and leaf water potential (Ψ(leaf)) were monitored in a high-yielding rice cultivar ('Takanari') under flooded and aerobic conditions at two soil moisture levels [nearly saturated (> -10 kPa) and mildly dry (> -30 kPa)] over 2 years. In an ancillary pot experiment, whole-plant hydraulic conductivity (soil-leaf hydraulic conductance; K(pa)) was measured under flooded and aerobic conditions. Adventitious root emergence and lateral root proliferation were restricted even under nearly saturated conditions, resulting in a 72-85 % reduction in total root length under aerobic culture conditions. Because of their reduced rooting size, plants grown under aerobic conditions tended to have lower K(pa) than plants grown under flooded conditions. Ψ(leaf) was always significantly lower in aerobic culture than in flooded culture, while g(s) was unchanged when the soil moisture was at around field capacity. g(s) was inevitably reduced when the soil water potential at 20-cm depth reached -20 kPa. Unstable performance of rice in water-saving cultivations is often associated with reduction in Ψ(leaf). Ψ(leaf) may reduce even if K(pa) is not significantly changed, but the lower Ψ(leaf) would certainly occur in case K(pa) reduces as a result of lower water-uptake capacity under aerobic conditions. Rice performance in aerobic culture might be improved through genetic manipulation that promotes lateral root branching and rhizogenesis as well as deep rooting.

Waterfowl density on agricultural fields managed to retain water in winter

USGS Publications Warehouse

Twedt, D.J.; Nelms, C.O.

1999-01-01

Managed water on private and public land provides habitat for wintering waterfowl in the Mississippi Valley, where flood control projects have reduced the area of natural flooding. We compared waterfowl densities on rice, soybean, and moist-soil fields under cooperative agreements to retain water from 1 November through 28 February in Arkansas and Mississippi and assessed temporal changes in waterfowl density during winter in 1991-1992 and 1992-1993. Fields flooded earlier in Arkansas, but retained water later in Mississippi. Over winter, waterfowl densities decreased in Arkansas and increased in Mississippi. Densities of waterfowl, including mallard (Anas platyrhynchos), the most abundant species observed, were greatest on moist-soil fields. However, soybean fields had the greatest densities of northern shoveler (Spatula clypeata).

Impact of production practices on physicochemical properties of rice grain quality.

PubMed

Bryant, Rolfe J; Anders, Merle; McClung, Anna

2012-02-01

Rice growers are interested in new technologies that can reduce input costs while maintaining high field yields and grain quality. The bed-and-furrow (BF) water management system benefits farmers through decreased water usage, labor, and fuel as compared to standard flood management. Fertilizer inputs can be reduced by producing rice in rotation with soybeans, a nitrogen-fixing crop, and with the use of slow-release fertilizers that reduce nitrogen volatilization and run-off. However, the influence of these cultural management practices on rice physicochemical properties is unknown. Our objective was to evaluate the influence of nitrogen fertilizer source, water management system, and crop rotation on rice grain quality. Grain protein concentration was lower in a continuous rice production system than in a rice-soybean rotation. Neither amylose content nor gelatinization temperature was altered by fertilizer source, crop rotation, or water management. BF water management decreased peak and breakdown viscosities relative to a flooded system. Peak and final paste viscosities were decreased by all fertilizer sources, whereas, crop rotation had no influence on the Rapid Visco Analyser profile. Sustainable production systems that decrease water use and utilize crop rotations and slow-release fertilizers have no major impact on rice physicochemical properties. Published 2011 by John Wiley & Sons, Ltd.

Response of rice genotype to straighthead disease as influenced by arsenic level and water management practices in soil.

PubMed

Hua, Bin; Yan, Wengui; Yang, John

2013-01-01

Arsenic (As) uptake by rice plants and the straighthead disease induced by As-based herbicide are of environmental concerns. Bioavailability or mobility of inorganic As in soil has been reported to be significantly influenced by soil minerals such as iron (hydr) oxide; however, the interactions of organic As such as monosodium methanearsonate (MSMA) with soil minerals are little studied, thus largely unknown. In an effort to minimize the As uptake by rice and determine rice cultivar response to soil MSMA level, a field experiment was conducted on three rice cultivars grown in both MSMA-treated and -untreated soils under continuous or intermittent flood water management practices. Results indicated that the grain yield and the occurrence of straighthead disease were cultivar-dependent and influenced by soil As level and water management practices. Straighthead-resistant cultivars yielded more and had lower grain As than the susceptible ones. Elevated soil As with continuous flood management significantly reduced the grain yield of susceptible cultivars by >89% due to substantially increased straighthead, which were induced by increased As content in grains. Yield reduction by MSMA treatment could be partially mitigated with intermittent flood water practice. The As accumulation was found to be associated with soil iron redox transformation influenced by the water management. This study demonstrates that the selection of less As-susceptible cultivars and intermittent flood water practice could be effective means to lower the As accumulation in grains and minimize the occurrence of the As-induced straighthead symptom and yield reduction. Copyright © 2012 Elsevier B.V. All rights reserved.

Crop Uptake of Arsenic from Flooded Paddy Fields in the Mekong Delta

NASA Astrophysics Data System (ADS)

Mohr, K.; Boye, K.

2014-12-01

Arsenic is found naturally in the soils in the Mekong delta in Vietnam and Cambodia. It originates from erosion in the Himalayas. When similar levels of arsenic are present in well aerated soil, it is not dangerous, because it is strongly bound to soil particles and not readily plant available. Arsenic is released when the soil is saturated with water, and therefore contaminates crops grown in flooded fields. This results in people being exposed to unsafe levels of arsenic from their food, such as rice and lotus, which are normally grown under flooded conditions. Rice is a staple food in these regions, so the transfer of arsenic from soil, to water, and ultimately into the grain, poses a threat to human health. We have conducted a limited, preliminary field survey of arsenic levels in soil, flood water, and crops from distinctly different paddy fields in the lower Mekong delta in Vietnam and Cambodia. The purpose of the study was to identify soils and crops (or specific plant parts) that are especially prone to arsenic transfer from soil to crop, and vice versa (i.e. arsenic uptake is prevented in spite of being present in the soil). In addition to arsenic concentration in soil, plant and water, we are examining other elements, such as carbon, nitrogen, sulfur and iron, which give us clues about what chemical and microbial processes that control the overall arsenic uptake.

Differences in CH4 and N2O emissions between rice nurseries in Chinese major rice cropping areas

NASA Astrophysics Data System (ADS)

Zhang, Yi; Li, Zhijie; Feng, Jinfei; Zhang, Xin; Jiang, Yu; Chen, Jin; Zhang, Mingqian; Deng, Aixing; Zhang, Weijian

2014-10-01

Studies on greenhouse gas (GHG) emissions from paddy field have primarily focused on the post-transplanting period, however, recent researches raise new concerns about GHGs emission from rice nursery. In this study, CH4 and N2O fluxes were determined from different nurseries under major rice cropping systems in China. The tested nurseries included flooded nursery (FN), moist nursery (MN) and dry nursery (DN). Methane emissions from FN were significantly higher than those from MN and DN under all the rice cropping systems. When comparing with FN, MN decreased total CH4 emissions by 74.2%, 72.1% and 49.6% under the rice-upland rotation cropping system (RUR), and the double rice cropping system for the early rice (EDR) and the late rice (LDR), respectively. DN decreased CH4 emissions by 99.2%, 92.0%, 99.0% and 78.6% compared to FN under the single rice cropping system (SR), RUR, EDR and LDR, respectively. When comparing with FN, MN and DN increased N2O emissions by 58.1-134.1% and 28.2-332.7%, respectively. Ultimately, compared with FN across the cropping systems, MN and DN decreased net global warming potentials (GWPs) of CH4 and N2O by 33-68% and 43-86%, respectively. The mitigating effect of MN and DN on total GWPs varied greatly across the systems, ranging from 30.8% in the LDR to 86.5% in the SR. Chinese actual emission from rice nurseries was reduced to 956.66 × 103 t CO2 eq from the theoretical estimate of 2242.59 × 103 t CO2 eq if under the flooded nursery scenario in 2012. Taking into account the large rice nursery area (2032.52 × 103 ha) in China, the results of this study clearly indicate the importance to estimate and mitigate GHGs emission from flooded rice nursery. Being effective to reduce GHG emissions and increase rice yield, dry nursery technique is a promising candidate for climate smart rice cropping.

Hydrolytic Activation Kinetics of the Herbicide Benzobicyclon in Simulated Aquatic Systems.

PubMed

Williams, Katryn L; Tjeerdema, Ronald S

2016-06-22

Herbicide resistance is a growing concern for weeds in California rice fields. Benzobicyclon (BZB; 3-(2-chloro-4-(methylsulfonyl)benzoyl)-2-phenylthiobicyclo[3.2.1]oct-2-en-4-one) has proven successful against resistant rice field weeds in Asia. A pro-herbicide, BZB forms the active agent, benzobicyclon hydrolysate (BH), in water; however, the transformation kinetics are not understood for aquatic systems, particularly flooded California rice fields. A quantitative experiment was performed to assess the primary mechanism and kinetics of BZB hydrolysis to BH. Complete conversion to BH was observed for all treatments. Basic conditions (pH 9) enhanced the reaction, with half-lives ranging from 5 to 28 h. Dissolved organic carbon (DOC) hindered transformation, which is consistent with other base-catalyzed hydrolysis reactions. BH was relatively hydrolytically stable, with 18% maximum loss after 5 days. Results indicate BZB is an efficient pro-herbicide under aqueous conditions such as those of a California rice field, although application may be best suited for fields with recirculating tailwater systems.

[Distribution characteristics of soil profile nitrous oxide concentration in paddy fields with different rice-upland crop rotation systems].

PubMed

Liu, Ping-li; Zhang, Xiao-lin; Xiong, Zheng-qin; Huang, Tai-qing; Ding, Min; Wang, Jin-yang

2011-09-01

To investigate the dynamic distribution patterns of nitrous oxide (N2O) in the soil profiles in paddy fields with different rice-upland crop rotation systems, a special soil gas collection device was adopted to monitor the dynamics of N2O at the soil depths 7, 15, 30, and 50 cm in the paddy fields under both flooding and drainage conditions. Two rotation systems were installed, i.e., wheat-single rice and oilseed rape-double rice, each with or without nitrogen (N) application. Comparing with the control, N application promoted the N2O production in the soil profiles significantly (P < 0.01), and there existed significant correlations in the N2O concentration among the four soil depths during the whole observation period (P < 0.01). In the growth seasons of winter wheat and oilseed rape under drainage condition and with or without N application, the N2O concentrations at the soil depths 30 cm and 50 cm were significantly higher than those at the soil depths 7 cm and 15 cm; whereas in the early rice growth season under flooding condition and without N application, the N2O concentrations at the soil depth 7 cm and 15 cm were significantly higher than those at the soil depths 30 cm and 50 cm (P < 0.05). No significant differences were observed in the N2O concentrations at the test soil depths among the other rice cropping treatments. The soil N2O concentrations in the treatments without N application peaked in the transitional period from the upland crops cropping to rice planting, while those in the treatments with N application peaked right after the second topdressing N of upland crops. Relatively high soil N2O concentrations were observed at the transitional period from the upland crops cropping to rice planting.

Comparative Analysis of Normalised Difference Spectral Indices Derived from MODIS for Detecting Surface Water in Flooded Rice Cropping Systems

PubMed Central

Boschetti, Mirco; Nutini, Francesco; Manfron, Giacinto; Brivio, Pietro Alessandro; Nelson, Andrew

2014-01-01

Identifying managed flooding in paddy fields is commonly used in remote sensing to detect rice. Such flooding, followed by rapid vegetation growth, is a reliable indicator to discriminate rice. Spectral indices (SIs) are often used to perform this task. However, little work has been done on determining which spectral combination in the form of Normalised Difference Spectral Indices (NDSIs) is most appropriate for surface water detection or which thresholds are most robust to separate water from other surfaces in operational contexts. To address this, we conducted analyses on satellite and field spectral data from an agronomic experiment as well as on real farming situations with different soil and plant conditions. Firstly, we review and select NDSIs proposed in the literature, including a new combination of visible and shortwave infrared bands. Secondly, we analyse spectroradiometric field data and satellite data to evaluate mixed pixel effects. Thirdly, we analyse MODIS data and Landsat data at four sites in Europe and Asia to assess NDSI performance in real-world conditions. Finally, we test the performance of the NDSIs on MODIS temporal profiles in the four sites. We also compared the NDSIs against a combined index previously used for agronomic flood detection. Analyses suggest that NDSIs using MODIS bands 4 and 7, 1 and 7, 4 and 6 or 1 and 6 perform best. A common threshold for each NDSI across all sites was more appropriate than locally adaptive thresholds. In general, NDSIs that use band 7 have a negligible increase in Commission Error over those that use band 6 but are more sensitive to water presence in mixed land cover conditions typical of moderate spatial resolution analyses. The best performing NDSI is comparable to the combined index but with less variability in performance across sites, suggesting a more succinct and robust flood detection method. PMID:24586381

Water management impacts on arsenic speciation and iron-reducing bacteria in contrasting rice-rhizosphere compartments.

PubMed

Somenahally, Anil C; Hollister, Emily B; Yan, Wengui; Gentry, Terry J; Loeppert, Richard H

2011-10-01

Rice cultivated on arsenic (As) contaminated-soils will accumulate variable grain-As concentrations, as impacted by varietal differences, soil variables, and crop management. A field-scale experiment was conducted to study the impact of intermittent and continuous flooding on As speciation and microbial populations in rice rhizosphere compartments of soils that were either historically amended with As pesticide or unamended with As. Rhizosphere-soil, root-plaque, pore-water and grain As were quantified and speciated, and microbial populations in rhizosphere soil and root-plaque were characterized. Total-As concentrations in rhizosphere and grain were significantly lower in intermittently flooded compared to the continuously flooded plots (86% lower in pore-water, 55% lower in root-plaque and 41% lower in grain samples). iAs(V), iAs(III), and DMAs(V) were the predominant As species detected in rhizosphere-soil and root-plaque, pore-water and grain samples, respectively. Relative proportions of Archaea and iron-reducing bacteria (FeRB) were higher in rhizosphere soil compared to root-plaque. In rhizosphere soil, the relative abundance of FeRB was lower in intermittently flooded compared to continuously flooded plots, but there were no differences between root-plaque samples. This study has demonstrated that reductions in dissolved As concentrations in the rhizosphere and subsequent decreases in grain-As concentration can be attained through water management.

Mercury cycling in agricultural and managed wetlands, Yolo Bypass, California: Spatial and seasonal variations in water quality

USGS Publications Warehouse

Alpers, Charles N.; Fleck, Jacob A.; Marvin-DiPasquale, Mark C.; Stricker, Craig A.; Stephenson, Mark; Taylor, Howard E.

2014-01-01

The seasonal and spatial variability of water quality, including mercury species, was evaluated in agricultural and managed, non-agricultural wetlands in the Yolo Bypass Wildlife Area, an area managed for multiple beneficial uses including bird habitat and rice farming. The study was conducted during an 11-month period (June 2007 to April 2008) that included a summer growing season and flooded conditions during winter. Methylmercury (MeHg) concentrations in surface water varied over a wide range (0.1 to 37 ng L−1 unfiltered; 0.04 to 7.3 ng L−1 filtered). Maximum MeHg values are among the highest ever recorded in wetlands. Highest MeHg concentrations in unfiltered surface water were observed in drainage from wild rice fields during harvest (September 2007), and in white rice fields with decomposing rice straw during regional flooding (February 2008). The ratio of MeHg to total mercury (MeHg/THg) increased about 20-fold in both unfiltered and filtered water during the growing season (June to August 2007) in the white and wild rice fields, and about 5-fold in fallow fields (July to August 2007), while there was little to no change in MeHg/THg in the permanent wetland. Sulfate-bearing fertilizer had no effect on Hg(II) methylation, as sulfate-reducing bacteria were not sulfate limited in these agricultural wetlands. Concentrations of MeHg in filtered and unfiltered water correlated with filtered Fe, filtered Mn, DOC, and two indicators of sulfate reduction: the SO4 2 −/Cl− ratio, and δ34S in aqueous sulfate. These relationships suggest that microbial reduction of SO4 2−, Fe(III), and possibly Mn(IV) may contribute to net Hg(II)-methylation in this setting.

LEACHING AND DEGRADATION OF 2,4-DICHLOROPHENOXIACETIC ACID, IN COLOMBIA RICE FLOODED SOIL.

PubMed

Huertas, J; Guerrero, J A; Martinez-Cordon, M J

2015-01-01

Rice is mostly cultivated on soil held under flooded conditions. Under these conditions pesticides undergo reductive transformations which are characteristic to rice fields and other anaerobic systems. The present study was undertaken to evaluate the mobility and persistence of 2,4-dichlorophenoxy acetic acid (2,4-D) under laboratory conditions for the rice crop in Espinal, Colombia. A displacement study was performed on a hand packed soil column 30 cm length. After leaching experiment, the soil from column was sliced into six successive sections (5 cm). Methanol acidified (H3PO4 0.25%) extraction was used to determine the herbicide residues in each section. 2,4-D experimental breakthrough curve was analyzed using Stanmod program (inverse problem) to obtain transport parameters. The non-equilibrium physical model fitted well the experimental breakthrough curve. The recovery percent of 2,4-D in leachates was 36.44% after 3.4 pore volumes, and retardation factor was 2.1, indicating low adsorption in that conditions. 2,4-D was rapidly degraded, with DT50 = 11.4 days. The results suggest that 2,4-D under flooded conditions have a high potential for leaching through the soil profile, although the elevated rate of degradation reduced the ground water contamination risk.

Chamber and eddy covariance comparisons of alternate wetting and drying and continuous flood irrigation in mid-South rice

NASA Astrophysics Data System (ADS)

Reba, M. L.; Fong, B.; Adviento-Borbe, A.; Runkle, B.

2016-12-01

The subtropical humid mid-south region produces nearly 75% of US rice. Rice cultivation contributes higher amounts of GHG emissions (CO2, CH4, and N2O) due to flooded field conditions. Accurate measurements of gas fluxes are important to regional and global climate models. A comparison between eddy covariance and static vented flux chamber measurement techniques is presented. These measurements were collected in two NE Arkansas commercial rice fields in 2015 and 2016 production seasons under two irrigation treatments: Alternate Wetting and Drying (AWD) and continuous flood (CF) irrigation. AWD can reduce GHG emissions and water use compared to CF by introducing aerobic conditions that reduce methanogen activity and drained conditions decrease water loss due to seepage or evapotranspiration. N2O was measured only with vented chambers, while CO2 and CH4 were measured with both techniques. In the vented flux chamber technique, headspace gas sampling occurred at least once a week every 20 minutes for one hour of chamber closure. Gas Chromatograph equipped with ECD and FID were used to analyze gas concentrations. Eddy covariance used high frequency measurements wind and concentration measurements to determine fluxes. Chamber measurements were found to be more sensitive during seedling and early vegetative growth while eddy covariance was more sensitive after canopy closure during mid-vegetative to reproductive growth. Unlike eddy covariance which measured net CO2 exchange, flux chamber method measured only CO2 ecosystem respiration because flux measurements occurred using an opaque chamber material.

Mapping paddy rice planting area in cold temperate climate region through analysis of time series Landsat 8 (OLI), Landsat 7 (ETM+) and MODIS imagery

NASA Astrophysics Data System (ADS)

Qin, Yuanwei; Xiao, Xiangming; Dong, Jinwei; Zhou, Yuting; Zhu, Zhe; Zhang, Geli; Du, Guoming; Jin, Cui; Kou, Weili; Wang, Jie; Li, Xiangping

2015-07-01

Accurate and timely rice paddy field maps with a fine spatial resolution would greatly improve our understanding of the effects of paddy rice agriculture on greenhouse gases emissions, food and water security, and human health. Rice paddy field maps were developed using optical images with high temporal resolution and coarse spatial resolution (e.g., Moderate Resolution Imaging Spectroradiometer (MODIS)) or low temporal resolution and high spatial resolution (e.g., Landsat TM/ETM+). In the past, the accuracy and efficiency for rice paddy field mapping at fine spatial resolutions were limited by the poor data availability and image-based algorithms. In this paper, time series MODIS and Landsat ETM+/OLI images, and the pixel- and phenology-based algorithm are used to map paddy rice planting area. The unique physical features of rice paddy fields during the flooding/open-canopy period are captured with the dynamics of vegetation indices, which are then used to identify rice paddy fields. The algorithm is tested in the Sanjiang Plain (path/row 114/27) in China in 2013. The overall accuracy of the resulted map of paddy rice planting area generated by both Landsat ETM+ and OLI is 97.3%, when evaluated with areas of interest (AOIs) derived from geo-referenced field photos. The paddy rice planting area map also agrees reasonably well with the official statistics at the level of state farms (R2 = 0.94). These results demonstrate that the combination of fine spatial resolution images and the phenology-based algorithm can provide a simple, robust, and automated approach to map the distribution of paddy rice agriculture in a year.

Mapping paddy rice planting area in cold temperate climate region through analysis of time series Landsat 8 (OLI), Landsat 7 (ETM+) and MODIS imagery.

PubMed

Qin, Yuanwei; Xiao, Xiangming; Dong, Jinwei; Zhou, Yuting; Zhu, Zhe; Zhang, Geli; Du, Guoming; Jin, Cui; Kou, Weili; Wang, Jie; Li, Xiangping

2015-07-01

Accurate and timely rice paddy field maps with a fine spatial resolution would greatly improve our understanding of the effects of paddy rice agriculture on greenhouse gases emissions, food and water security, and human health. Rice paddy field maps were developed using optical images with high temporal resolution and coarse spatial resolution (e.g., Moderate Resolution Imaging Spectroradiometer (MODIS)) or low temporal resolution and high spatial resolution (e.g., Landsat TM/ETM+). In the past, the accuracy and efficiency for rice paddy field mapping at fine spatial resolutions were limited by the poor data availability and image-based algorithms. In this paper, time series MODIS and Landsat ETM+/OLI images, and the pixel- and phenology-based algorithm are used to map paddy rice planting area. The unique physical features of rice paddy fields during the flooding/open-canopy period are captured with the dynamics of vegetation indices, which are then used to identify rice paddy fields. The algorithm is tested in the Sanjiang Plain (path/row 114/27) in China in 2013. The overall accuracy of the resulted map of paddy rice planting area generated by both Landsat ETM+ and OLI is 97.3%, when evaluated with areas of interest (AOIs) derived from geo-referenced field photos. The paddy rice planting area map also agrees reasonably well with the official statistics at the level of state farms ( R 2 = 0.94). These results demonstrate that the combination of fine spatial resolution images and the phenology-based algorithm can provide a simple, robust, and automated approach to map the distribution of paddy rice agriculture in a year.

Optimal Soil Eh, pH, and Water Management for Simultaneously Minimizing Arsenic and Cadmium Concentrations in Rice Grains.

PubMed

Honma, Toshimitsu; Ohba, Hirotomo; Kaneko-Kadokura, Ayako; Makino, Tomoyuki; Nakamura, Ken; Katou, Hidetaka

2016-04-19

Arsenic (As) and cadmium (Cd) concentrations in rice grains are a human health concern. We conducted field experiments to investigate optimal conditions of Eh and pH in soil for simultaneously decreasing As and Cd accumulation in rice. Water managements in the experiments, which included continuous flooding and intermittent irrigation with different intervals after midseason drainage, exerted striking effects on the dissolved As and Cd concentrations in soil through changes in Eh, pH, and dissolved Fe(II) concentrations in the soil. Intermittent irrigation with three-day flooding and five-day drainage was found to be effective for simultaneously decreasing the accumulation of As and Cd in grain. The grain As and Cd concentrations were, respectively, linearly related to the average dissolved As and Cd concentrations during the 3 weeks after heading. We propose a new indicator for expressing the degree to which a decrease in the dissolved As or Cd concentration is compromised by the increase in the other. For minimizing the trade-off relationship between As and Cd in rice grains in the field investigated, water management strategies should target the realization of optimal soil Eh of -73 mV and pH of 6.2 during the 3 weeks after heading.

The variations of Oxidation-Reduction Potential in paddy soil and effects on the methane emission from a periodically irrigated paddy field.

NASA Astrophysics Data System (ADS)

Yagi, K.; Iwata, T.; Wakikuromaru, N.

2014-12-01

Paddy fields are one of the most important eco-system in monsoon Asia and one of the largest source of CH4 emission. CH4 has significant contribution to the global warming next to CO2 and its greenhouse effect is about 21 times as large as same amount of CO2. CH4 is generated by decomposition of organic matter in soil under anaerobic condition. Oxidation-Reduction Potential (ORP) is the most suitable index representing soil aerobic condition. Or, CH4 is more generated under lower ORP conditions. In this study, ORP in paddy soil was measured during rice cultivated season at a periodically irrigated paddy field, and some effects on the methane flux from the paddy soil was investigated. 3-days flood and 4-days drained condition were regularly repeated at the site from late-June to early October. ORP under flooded condition was measured during irrigated term in 2013 at two mode; regular interval measurement every 2 weeks and intensive measurements during two flooded periods. Methane flux was also measured by the aerodynamic gradient technique. ORP showed rapid decrease when irrigation water was introduced in the paddy field, and lower ORP was shown under the longer flooded condition. From the seasonal-term point of view, lower ORP was shown in later rice season. ORP was suitably modeled as a function of irrigation time. During an irrigation period for four days, higher methane emissions were shown under lower OPR conditions as shown in Fig.1. From the seasonal-term point of view, however, no significant relationship between ORP and methane fluxes. Rapid rise of CH4 flux in early August and gradual decrease between late August and September were shown. It is suggested that seasonal change of methane flux is affected by seasonal changes of soil temperature or the growth level of rice plants.

From QTL to variety-harnessing the benefits of QTLs for drought, flood and salt tolerance in mega rice varieties of India through a multi-institutional network.

PubMed

Singh, Renu; Singh, Yashi; Xalaxo, Suchit; Verulkar, S; Yadav, Neera; Singh, Shweta; Singh, Nisha; Prasad, K S N; Kondayya, K; Rao, P V Ramana; Rani, M Girija; Anuradha, T; Suraynarayana, Y; Sharma, P C; Krishnamurthy, S L; Sharma, S K; Dwivedi, J L; Singh, A K; Singh, P K; Nilanjay; Singh, N K; Kumar, Rajesh; Chetia, S K; Ahmad, T; Rai, M; Perraju, P; Pande, Anita; Singh, D N; Mandal, N P; Reddy, J N; Singh, O N; Katara, J L; Marandi, B; Swain, P; Sarkar, R K; Singh, D P; Mohapatra, T; Padmawathi, G; Ram, T; Kathiresan, R M; Paramsivam, K; Nadarajan, S; Thirumeni, S; Nagarajan, M; Singh, A K; Vikram, Prashant; Kumar, Arvind; Septiningshih, E; Singh, U S; Ismail, A M; Mackill, D; Singh, Nagendra K

2016-01-01

Rice is a staple cereal of India cultivated in about 43.5Mha area but with relatively low average productivity. Abiotic factors like drought, flood and salinity affect rice production adversely in more than 50% of this area. Breeding rice varieties with inbuilt tolerance to these stresses offers an economically viable and sustainable option to improve rice productivity. Availability of high quality reference genome sequence of rice, knowledge of exact position of genes/QTLs governing tolerance to abiotic stresses and availability of DNA markers linked to these traits has opened up opportunities for breeders to transfer the favorable alleles into widely grown rice varieties through marker-assisted backcross breeding (MABB). A large multi-institutional project, "From QTL to variety: marker-assisted breeding of abiotic stress tolerant rice varieties with major QTLs for drought, submergence and salt tolerance" was initiated in 2010 with funding support from Department of Biotechnology, Government of India, in collaboration with International Rice Research Institute, Philippines. The main focus of this project is to improve rice productivity in the fragile ecosystems of eastern, northeastern and southern part of the country, which bear the brunt of one or the other abiotic stresses frequently. Seven consistent QTLs for grain yield under drought, namely, qDTY1.1, qDTY2.1, qDTY2.2, qDTY3.1, qDTY3.2, qDTY9.1 and qDTY12.1 are being transferred into submergence tolerant versions of three high yielding mega rice varieties, Swarna-Sub1, Samba Mahsuri-Sub1 and IR 64-Sub1. To address the problem of complete submergence due to flash floods in the major river basins, the Sub1 gene is being transferred into ten highly popular locally adapted rice varieties namely, ADT 39, ADT 46, Bahadur, HUR 105, MTU 1075, Pooja, Pratikshya, Rajendra Mahsuri, Ranjit, and Sarjoo 52. Further, to address the problem of soil salinity, Saltol, a major QTL for salt tolerance is being transferred into seven popular locally adapted rice varieties, namely, ADT 45, CR 1009, Gayatri, MTU 1010, PR 114, Pusa 44 and Sarjoo 52. Genotypic background selection is being done after BC2F2 stage using an in-house designed 50K SNP chip on a set of twenty lines for each combination, identified with phenotypic similarity in the field to the recipient parent. Near-isogenic lines with more than 90% similarity to the recipient parent are now in advanced generation field trials. These climate smart varieties are expected to improve rice productivity in the adverse ecologies and contribute to the farmer's livelihood. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Strong shift in the diazotrophic endophytic bacterial community inhabiting rice (Oryza sativa) plants after flooding.

PubMed

Ferrando, Lucía; Fernández Scavino, Ana

2015-09-01

Flooding impacts soil microbial communities, but its effect on endophytic communities has rarely been explored. This work addresses the effect of flooding on the abundance and diversity of endophytic diazotrophic communities on rice plants established in a greenhouse experiment. The nifH gene was significantly more abundant in roots after flooding, whereas the nifH gene copy numbers in leaves were unaffected and remained low. The PCA (principal component analysis) of T-RFLP (terminal restriction fragment length polymorphism) profiles indicated that root communities of replicate plots were more similar and diverse after flooding than before flooding. The nifH libraries obtained by cloning and 454 pyrosequencing consistently showed a remarkable shift in the diazotrophic community composition after flooding. Gammaproteobacteria (66-98%), mainly of the genus Stenotrophomonas, prevailed in roots before flooding, whereas Betaproteobacteria was the dominant class (26-34%) after flooding. A wide variety of aerotolerant and anaerobic diazotrophic bacteria (e.g. Dechloromonas, Rhodopseudomonas, Desulfovibrio, Geobacter, Chlorobium, Spirochaeta, Selenomonas and Dehalobacter) with diverse metabolic traits were retrieved from flooded rice roots. These findings suggest that endophytic communities could be significantly impacted by changes in plant-soil conditions derived from flooding during rice cropping. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Dissipation of phenanthrene and pyrene at the aerobic-anaerobic soil interface: differentiation induced by the rhizosphere of PAH-tolerant and PAH-sensitive rice (Oryza sativa L.) cultivars.

PubMed

He, Yan; Xia, Wen; Li, Xinfeng; Lin, Jiajiang; Wu, Jianjun; Xu, Jianming

2015-03-01

A pot experiment was conducted to reveal the removal of two polycyclic aromatic hydrocarbons (PAHs) (phenanthrene, PHE, and pyrene, PYR) during rice cultivation in a paddy field. The rhizosphere effect on facilitating dissipation of PAHs varied simultaneously as a function of soil properties, PAH types, cultivation time, and genotypes within rice cultivars, with differences performed for PYR but not PHE. Changes in soil PLFA profiles evidenced that the growth of rice roots modified the dominant species within rhizosphere microbial communities and induced a selective enrichment of Gram-negative aerobic bacteria capable of degrading, thereby resulting in the differentiated dissipation of PYR. While the insignificant differences in PHE dissipation might be attributed to its higher solubility and availability under flooded condition that concealed the differences in improvement of bioavailability for microorganisms between rhizosphere and non-rhizosphere, and between both soils and both rice cultivars. Our findings illustrate that the removal of PAHs in paddy soils was more complex relative to those in dryland soils. This was possibly due to the specialty of rice roots for oxygen secretion that provides development of redox heterogeneous microbial habitats at root-soil interface under flooded condition.

Inhibition experiments on nitrous oxide emission from paddy soils

NASA Astrophysics Data System (ADS)

Xu, Xingkai; Boeckx, Pascal; Zhou, Likai; Van Cleemput, Oswald

2002-08-01

Rice fields using nitrogen-based fertilizers play an important role in the global N2O budget. However, our knowledge is still limited with regard to the mechanisms affecting the N2O emission and to the measures that can reduce the emission. This paper reports a study of N2O emission from paddy soils. The effects of urea, hydroquinone (HQ, a urease inhibitor), and dicyandiamide (DCD, a nitrification inhibitor) have been studied in pot experiments with and without rice plants and with and without addition of wheat straw. With no wheat straw amendment, all treatments with inhibitors, especially with HQ + DCD, had a much smaller N2O emission during the rice growing period than the urea treatment, whereas a substantially increased N2O emission was observed from a rice-free soil with inhibitors. The N2O emission from the rice-planted soil was exponentially positive correlated with the NO3--N concentration in the rice aboveground biomass. By comparing the total N2O emission from the rice-free soil and from the rice-planted soil, we found that urea application alone might induce an apparent plant-mediated N2O emission, being 0.39 +/- 0.08% of the applied urea N. Wheat straw incorporated into the flooded surface layer soil could increase the plant-mediated N2O emission significantly. However, application of HQ + DCD could reduce this emission (0.27 +/- 0.08% of the applied urea N, compared with 0.89 +/- 0.18% in the urea treatment). It also reduced the N2O emission from the rice-free soil and from the rice-planted soil. Stepwise regression analysis indicates that denitrification in the flooded surface layer soil was the main source of N2O emission from this wetland rice cultivation, particularly when wheat straw was added. A significantly nonlinear negative relation was found between the N2O emission and the CH4 emission when no wheat straw was added, but it was hard to quantify this trade-off relation when wheat straw was incorporated into the flooded surface layer soil.

Water balance of rice plots under three different water treatments: monitoring activity and experimental results

NASA Astrophysics Data System (ADS)

Chiaradia, Enrico Antonio; Romani, Marco; Facchi, Arianna; Gharsallah, Olfa; Cesari de Maria, Sandra; Ferrari, Daniele; Masseroni, Daniele; Rienzner, Michele; Battista Bischetti, Gian; Gandolfi, Claudio

2014-05-01

In the agricultural seasons 2012 and 2013, a broad monitoring activity was carried out at the Rice Research Centre of Ente Nazionale Risi (CRR-ENR) located in Castello d'Agogna (PV, Italy) with the purpose of comparing the water balance components of paddy rice (Gladio cv.) under different water regimes and assessing the possibility of reducing the high water inputs related to the conventional practice of continuous submergence. The experiments were laid out in six plots of about 20 m x 80 m each, with two replicates for each of the following water regimes: i) continuous flooding with wet-seeded rice (FLD), ii) continuous flooding from around the 3-leaf stage with dry-seeded rice (3L-FLD), and iii) surface irrigation every 7-10 days with dry-seeded rice (IRR). One out of the two replicates of each treatment was instrumented with: water inflow and outflow meters, set of piezometers, set of tensiometers and multi-sensor moisture probes. Moreover, an eddy covariance station was installed on the bund between the treatments FLD and IRR. Data were automatically recorded and sent by a wireless connection to a PC, so as to be remotely controlled thanks to the development of a Java interface. Furthermore, periodic measurements of crop biometric parameters (LAI, crop height and rooting depth) were performed in both 2012 and 2013 (11 and 14 campaigns respectively). Cumulative water balance components from dry-seeding (3L-FLD and IRR), or flooding (FLD), to harvest were calculated for each plot by either measurements (i.e. rainfall, irrigation and surface drainage) or estimations (i.e. difference in the field water storage, evaporation from both the soil and the water surface and transpiration), whereas the sum of percolation and capillary rise (i.e. the 'net percolation') was obtained as the residual term of the water balance. Incidentally, indices of water application efficiency (evapotranspiration over net water input) and water productivity (grain production over net water input) were calculated for each treatment. The outcomes show that the water application efficiencies of all treatments were higher in 2013 than in 2012 (by 23%, 25% and 4% for FLD, 3L-FLD, and IRR respectively). These results could be ascribed to the higher groundwater level observed in 2013 (about 10-15 cm closer to the soil surface), likely due to the conversion of the field beyond the monitored plots from soybean to flooded rice. Moreover, a small increase of the water application efficiency of 3L-FLD was found if compared to FLD (3% on average), while the water application efficiency of IRR was, on average, higher by 67% compared to FLD. The good performance of IRR is related to lower percolation rates and a relevant contribution of capillary rise due to the shallow groundwater table maintained by the continuous submergence of the surrounding paddy fields. The performed experiment highlighted that significant improvement in the water use efficiency at the field scale can be achieved. However, a widespread adoption of water regimes different from continuous flooding should be carefully evaluated by a larger-scale approach since a consequent drop in the groundwater table depth could have repercussions on the potential gains themselves.

Analysis of hyperspectral field radiometric data for monitoring nitrogen concentration in rice crops

NASA Astrophysics Data System (ADS)

Stroppiana, D.; Boschetti, M.; Confalonieri, R.; Bocchi, S.; Brivio, P. A.

2005-10-01

Monitoring crop conditions and assessing nutrition requirements is fundamental for implementing sustainable agriculture. Rational nitrogen fertilization is of particular importance in rice crops in order to guarantee high production levels while minimising the impact on the environment. In fact, the typical flooded condition of rice fields can be a significant source of greenhouse gasses. Information on plant nitrogen concentration can be used, coupled with information about the phenological stage, to plan strategies for a rational and spatially differentiated fertilization schedule. A field experiment was carried out in a rice field Northern Italy, in order to evaluate the potential of field radiometric measurements for the prediction of rice nitrogen concentration. The results indicate that rice reflectance is influenced by nitrogen supply at certain wavelengths although N concentration cannot be accurately predicted based on the reflectance measured at a given wavelength. Regression analysis highlighted that the visible region of the spectrum is most sensitive to plant nitrogen concentration when reflectance measures are combined into a spectral index. An automated procedure allowed the analysis of all the possible combinations into a Normalized Difference Index (NDI) of the narrow spectral bands derived by spectral resampling of field measurements. The derived index appeared to be least influenced by plant biomass and Leaf Area Index (LAI) providing a useful approach to detect rice nutritional status. The validation of the regressive model showed that the model is able to predict rice N concentration (R2=0.55 [p<0.01] RRMSE=29.4; modelling efficiency close to the optimum value).

Field investigation to assess nutrient emission from paddy field to surface water in river catchment

NASA Astrophysics Data System (ADS)

Kogure, Kanami; Aichi, Masaatsu; Zessner, Matthias

2015-04-01

In order to maintain good river environment, it is remarkably important to understand and to control nutrient behavior such as Nitrogen and Phosphorus. Our former research dealing with nutrient emission analysis in the Tone River basin area in Japan, in addition to urban and industrial waste water, nutrient emission from agricultural activity is dominant pollution source into the river system. Japanese style agriculture produces large amount of rice and paddy field occupies large areas in Japanese river basin areas. While paddy field can deteriorate river water quality by outflow of fertilizer, it is also suggested that paddy field has water purification function. As we carried out investigation in the Tone River Basin area, data were obtained which dissolved nitrogen concentration is lower in discharging water from paddy field than inflowing water into the field. Regarding to nutrient emission impact from paddy field, sufficient data are required to discuss quantitatively seasonal change of material behavior including flooding season and dry season, difference of climate condition, soil type, and rice species, to evaluate year round comprehensive impact from paddy field to the river system. In this research, field survey in paddy field and data collection relating rice production were carried out as a preliminary investigation to assess how Japanese style paddy field contributes year round on surface water quality. Study sites are three paddy fields located in upper reach of the Tone River basin area. The fields are flooded from June to September. In 2014, field investigations were carried out three times in flooding period and twice in dry period. To understand characteristics of each paddy field and seasonal tendency accompanying weather of agricultural event, short term investigations were conducted and we prepare for further long term investigation. Each study site has irrigation water inflow and outflow. Two sites have tile drainage system under the field and TD water can be sampled for infiltrating water measurement. We installed monitoring wells to measure ground water level and water quality. Inflow, outflow, flooding water, infiltrating water, and ground water were measured and sampled. Regarding to parameters, temperature, pH, EC, DO and COD, main ions were measured to understand characteristic of water quality and transformation processes. Inorganic forms of nitrogen and phosphorus were also measured, as behavior and balance of nitrogen and phosphorus are focused on. We observed following points by taking data of water quality; seasonal trend, changes occurred according to agricultural events like irrigation and fertilization. Nitrogen in ground water tends to high in June due to fertilizer. It is thought because farmers fertilize the filed before transplanting at the beginning of flooding season. Regarding to dissolved inorganic nitrogen, higher concentrations were observed in inflow water than in flooding water and outflow water. Though it needs discussion in loads as well as flow measurement, this suggests that nutrients are absorbed in paddy field and less nutrients are emitted after irrigation water passing through paddy field. Based on this research we are planning continuous investigation to assess environmental impact from paddy field.

Methane and nitrous oxide emissions from three paddy rice based cultivation systems in Southwest China

NASA Astrophysics Data System (ADS)

Jiang, Changsheng; Wang, Yuesi; Zheng, Xunhua; Zhu, Bo; Huang, Yao; Hao, Qingju

2006-05-01

To understand methane (CH4) and nitrous oxide (N2O) emissions from permanently flooded rice paddy fields and to develop mitigation options, a field experiment was conducted in situ for two years (from late 2002 to early 2005) in three rice-based cultivation systems, which are a permanently flooded rice field cultivated with a single time and followed by a non-rice season (PF), a rice-wheat rotation system (RW) and a rice-rapeseed rotation system (RR) in a hilly area in Southwest China. The results showed that the total CH4 emissions from PF were 646.3±52.1 and 215.0±45.4 kg CH4 hm-2 during the rice-growing period and non-rice period, respectively. Both values were much lower than many previous reports from similar regions in Southwest China. The CH4 emissions in the rice-growing season were more intensive in PF, as compared to RW and RR. Only 33% of the total annual CH4 emission in PF occurred in the non-rice season, though the duration of this season is two times longer than the rice season. The annual mean N2O flux in PF was 4.5±0.6 kg N2O hm-2 yr-1. The N2O emission in the rice-growing season was also more intensive than in the non-rice season, with only 16% of the total annual emission occurring in the non-rice season. The amounts of N2O emission in PF were ignorable compared to the CH4 emission in terms of the global warming potential (GWP). Changing PF to RW or RR not only eliminated CH4 emissions in the non-rice season, but also substantially reduced the CH4 emission during the following rice-growing period (ca. 58%, P<0.05). However, this change in cultivation system substantially increased N2O emissions, especially in the non-rice season, by a factor of 3.7 to 4.5. On the 100-year horizon, the integrated GWP of total annual CH4 and N2O emissions satisfies PF≫RR≈RW. The GWP of PF is higher than that of RW and RR by a factor of 2.6 and 2.7, respectively. Of the total GWP of CH4 and N2O emissions, CH4 emission contributed to 93%, 65% and 59% in PF, RW and RR, respectively. These results suggest that changing PF to RW and RR can substantially reduce not only CH4 emission but also the total GWP of the CH4 and N2O emissions.

[Characteristics of paddy field nitrogen leakage and runoff in rice-duck farming system].

PubMed

Yu, Xiang; Wang, Qiang-sheng; Wang, Shao-hua; Liu, Zheng-hui; Wang, Xia-wen; Ding, Yan-feng

2009-01-01

A field experiment was conducted to study the characteristics of paddy field nitrogen (N) leakage and runoff under rice-duck farming (MRD), conventional farming (MR), and conventional farming with flooding (CK). Comparing with that under MR, the paddy field under MRD had a notable decrease of N (especially NO3- -N) concentration in its leaked liquid; but this concentration was tended to be increased, compared with that under CK. After 7-9 days of fertilization, the NH4+ -N and NO3- -N concentrations in paddy field surface water were higher under MRD than under MR. However, owing to the no draining and the higher band, the paddy field under MRD had a notable reduction of drainage, resulting in a marked decrease of N runoff than that under MR. Comparing with MR, the paddy field under MRD had an addition of nitrogen supply from duck dung, a reduction of N leakage and runoff, a lesser application of chemical nitrogen fertilizer, and more nitrogen uptake by rice plant. Both the reduction of N input and that of N output in rice-duck farming system were nearly equal in quantity.

Rice methylmercury exposure and mitigation: a comprehensive review

USGS Publications Warehouse

Rothenberg, Sarah E.; Windham-Myers, Lisamarie; Creswell, Joel E.

2014-01-01

Rice cultivation practices from field preparation to post-harvest transform rice paddies into hot spots for microbial mercury methylation, converting less-toxic inorganic mercury to more-toxic methylmercury, which is likely translocated to rice grain. This review includes 51 studies reporting rice total mercury and/or methylmercury concentrations, based on rice (Orzya sativa) cultivated or purchased in 15 countries. Not surprisingly, both rice total mercury and methylmercury levels were significantly higher in polluted sites compared to non-polluted sites (Wilcoxon rank sum, p<0.001). However, rice percent methylmercury (of total mercury) did not differ statistically between polluted and non-polluted sites (Wilcoxon rank sum, p=0.35), suggesting comparable mercury methylation rates in paddy soil across these sites and/or similar accumulation of mercury species for these rice cultivars. Studies characterizing the effects of rice cultivation under more aerobic conditions were reviewed to determine the mitigation potential of this practice. Rice management practices utilizing alternating wetting and drying (instead of continuous flooding) caused soil methylmercury levels to spike, resulting in a strong methylmercury pulse after fields were dried and reflooded; however, it is uncertain whether this led to increased translocation of methylmercury from paddy soil to rice grain. Due to the potential health risks, it is advisable to investigate this issue further, and to develop separate water management strategies for mercury polluted and non-polluted sites, in order to minimize methylmercury exposure through rice ingestion.

Rice Methylmercury Exposure and Mitigation: A Comprehensive Review

PubMed Central

Rothenberg, Sarah E.; Windham-Myers, Lisamarie; Creswell, Joel E.

2014-01-01

Rice cultivation practices from field preparation to post-harvest transform rice paddies into hot spots for microbial mercury methylation, converting less-toxic inorganic mercury to more-toxic methylmercury, which is likely translocated to rice grain. This review includes 51 studies reporting rice total mercury and/or methylmercury concentrations, based on rice cultivated or purchased in 15 countries. Not surprisingly, both rice total mercury and methylmercury levels were significantly higher in polluted sites compared to non-polluted sites (Wilcoxon rank sum, p<0.001). However, rice percent methylmercury (of total mercury) did not differ statistically between polluted and non-polluted sites (Wilcoxon rank sum, p=0.35), suggesting comparable mercury methylation rates in paddy soil across these sites and/or similar accumulation of mercury species for these rice cultivars. Studies characterizing the effect of rice cultivation under more aerobic conditions were reviewed to determine the mitigation potential of this practice. Rice management practices utilizing alternating wetting and drying (instead of continuous flooding) caused soil methylmercury levels to spike, resulting in a strong methylmercury pulse after fields were dried and reflooded; however, it is uncertain whether this led to increased translocation of methylmercury from paddy soil to rice grain. Due to the potential health risks, it is advisable to investigate this issue further, and to develop separate water management strategies for mercury polluted and non-polluted sites, which minimize methylmercury exposure through rice ingestion. PMID:24972509

Mapping paddy rice planting area in wheat-rice double-cropped areas through integration of Landsat-8 OLI, MODIS, and PALSAR images.

PubMed

Wang, Jie; Xiao, Xiangming; Qin, Yuanwei; Dong, Jinwei; Zhang, Geli; Kou, Weili; Jin, Cui; Zhou, Yuting; Zhang, Yao

2015-05-12

As farmland systems vary over space and time (season and year), accurate and updated maps of paddy rice are needed for studies of food security and environmental problems. We selected a wheat-rice double-cropped area from fragmented landscapes along the rural-urban complex (Jiangsu Province, China) and explored the potential utility of integrating time series optical images (Landsat-8, MODIS) and radar images (PALSAR) in mapping paddy rice planting areas. We first identified several main types of non-cropland land cover and then identified paddy rice fields by selecting pixels that were inundated only during paddy rice flooding periods. These key temporal windows were determined based on MODIS Land Surface Temperature and vegetation indices. The resultant paddy rice map was evaluated using regions of interest (ROIs) drawn from multiple high-resolution images, Google Earth, and in-situ cropland photos. The estimated overall accuracy and Kappa coefficient were 89.8% and 0.79, respectively. In comparison with the National Land Cover Data (China) from 2010, the resultant map better detected changes in the paddy rice fields and revealed more details about their distribution. These results demonstrate the efficacy of using images from multiple sources to generate paddy rice maps for two-crop rotation systems.

Cadmium dynamics in soil pore water and uptake by rice: Influences of soil-applied selenite with different water managements.

PubMed

Wan, Yanan; Camara, Aboubacar Younoussa; Yu, Yao; Wang, Qi; Guo, Tianliang; Zhu, Lina; Li, Huafen

2018-05-11

Cadmium (Cd) in rice grains is a potential threat to human health. This study investigated the effects of selenite fertilisation (0 mg kg -1 , 0.5 mg kg -1 , and 1.0 mg kg -1 ) on soil solution Cd dynamics and rice uptake. Rice was grown in two Cd-contaminated soils in Jiangxi and Hunan Provinces under two different sets of conditions: aerobic and flooded. The experiments were conducted in pots. The plants were harvested at the seedling stage and at maturity to determine their Cd levels. Soil solutions were also extracted during the growing season to monitor Cd dynamics. The results showed that in the Jiangxi soil (pH 5.25), Cd concentrations in the soil solutions, seedlings, and mature rice plants were higher under aerobic than under flooded water management conditions. In the Hunan soil (pH 7.26), however, flooding decreased Cd levels in the rice seedlings but not in mature plants. Selenite additions to the Hunan soil decreased Cd concentrations in the soil solutions and in the mature rice plants. These effects were not observed for the solutions or the plants from Jiangxi soil amended with selenite. Relative to the control treatment, 0.5 mg kg -1 selenite decreased the rice grain Cd content by 45.2% and 67.7% under aerobic and flooding conditions, respectively. The results demonstrated that water management regimes affected rice Cd uptake more effectively in Jiangxi than in Hunan soil, whereas selenite addition was more effective in Hunan than in Jiangxi soil. Selenite addition was also more effective at reducing rice grain Cd levels when it was applied under flooding than under aerobic conditions. Copyright © 2018 Elsevier Ltd. All rights reserved.

[Accumulation of S, Fe and Cd in rhizosphere of rice and their uptake in rice with different water managements].

PubMed

Zhang, Xue-Xia; Zhang, Xiao-Xia; Zheng, Yu-Ji; Wang, Rong-Ping; Chen, Neng-Chang; Lu, Pu-Xiang

2013-07-01

The interactions between the concentrations of sulfur, iron and cadmium in the rhizosphere and their uptakes in rice (Oryza sativa L. ) were studied using paddy soil which was contaminated by acid mine drainage under five water-management treatments of 60%, 80%, 100% field moisture capacity (FMC), flooded throughout the entire rice growth period and flooded followed by keeping 80% FMC after heading-flowering period. The water managements had no significant influence on the Fe and Cd concentrations in rhizosphere soil in maturity stage, although the concentration of Cd slightly increased with the increase of soil moisture in the tillering stage. However, the uptake of Fe and Cd in rice was obviously related to water managements. The increase of soil moisture enhanced the uptake of Fe, but decreased the uptake of Cd in different organs of rice (roots, stems and leaves, grains) except for Cd uptake of the root in the 60% FMC treatment. However, aerobic treatment after heading-flowering period enhanced Cd uptake in rice in all treatments, but did not influence the uptake of Fe in rice. On the other hand, the increase of soil moisture reduced the concentrations of total sulfur and available sulfur in the rhizosphere soil except for the 60% FMC treatment, which corresponded with the reduction of Cd uptake in rice. And the aerobic treatment promoted Cd uptake in rice, which was also positively related to the increase of total sulfur and available sulfur in rhizosphere soil. Therefore, it was concluded that the uptake and speciation of sulfur in rhizosphere soil other than the change of Fe concentration induced by water management could play an important role in Cd uptake of rice.

Rice Yield and the Fate of Fertilizer Nitrogen as Affected by Addition of Earthworm Casts Collected from Oilseed Rape Fields: A Pot Experiment.

PubMed

Huang, Min; Zhou, Xuefeng; Xie, Xiaobing; Zhao, Chunrong; Chen, Jiana; Cao, Fangbo; Zou, Yingbin

2016-01-01

The mechanism associated with improvement of soil nutritional status by oilseed rape crop, leading to better performance of rice crop, in rice-oilseed rape cropping systems is little known. The present study was aimed to test the hypothesis that earthworm casts produced during oilseed rape-growing season have positive effects on grain yield and fertilizer nitrogen (N) utilization in the subsequent flooded rice crop. A 15N-tracing pot experiment was conducted to determine the effects of earthworm casts collected from oilseed rape fields on yield attributes in rice and the fate of fertilizer N. Soil treated with earthworm casts (soil: earthworm casts = 4: 1, w/w) (EC1) produced 39% higher grain yield than soil only (EC0). EC1 had 18% more panicle number and 10% higher spikelet filling percentage than EC0. Aboveground biomass and harvest index were higher in EC1 than in EC0 by 20% and 15%, respectively. SPAD values in flag leaves were 10% and 22% higher under EC1 than EC0 at 15 and 20 days after heading, respectively. EC1 had 19% higher total N uptake and 18% higher physiological N-use efficiency than EC0. These positive effects of earthworm casts on yield attributes offset negative effects of decreasing N rate from 0.74 g pot-1 (equivalent to the recommended field rate of 150 kg ha-1) to 0.44 g pot-1 (equivalent to 60% of the recommended rate). Fertilizer N retention rate was 7% higher while fertilizer N loss rate was 6% lower in EC1 than in EC0. Our study suggests that earthworm casts produced during oilseed rape-growing season are expected to have the following benefits on the subsequent flooded rice system: (1) improving growth and physiological processes in rice plants and consequently increasing rice grain yield, and (2) increasing fertilizer N retention rate and hence decreasing fertilizer N loss rate and reducing environmental risk.

Rice Yield and the Fate of Fertilizer Nitrogen as Affected by Addition of Earthworm Casts Collected from Oilseed Rape Fields: A Pot Experiment

PubMed Central

Huang, Min; Zhou, Xuefeng; Xie, Xiaobing; Zhao, Chunrong; Chen, Jiana; Cao, Fangbo; Zou, Yingbin

2016-01-01

The mechanism associated with improvement of soil nutritional status by oilseed rape crop, leading to better performance of rice crop, in rice-oilseed rape cropping systems is little known. The present study was aimed to test the hypothesis that earthworm casts produced during oilseed rape-growing season have positive effects on grain yield and fertilizer nitrogen (N) utilization in the subsequent flooded rice crop. A 15N-tracing pot experiment was conducted to determine the effects of earthworm casts collected from oilseed rape fields on yield attributes in rice and the fate of fertilizer N. Soil treated with earthworm casts (soil: earthworm casts = 4: 1, w/w) (EC1) produced 39% higher grain yield than soil only (EC0). EC1 had 18% more panicle number and 10% higher spikelet filling percentage than EC0. Aboveground biomass and harvest index were higher in EC1 than in EC0 by 20% and 15%, respectively. SPAD values in flag leaves were 10% and 22% higher under EC1 than EC0 at 15 and 20 days after heading, respectively. EC1 had 19% higher total N uptake and 18% higher physiological N-use efficiency than EC0. These positive effects of earthworm casts on yield attributes offset negative effects of decreasing N rate from 0.74 g pot–1 (equivalent to the recommended field rate of 150 kg ha–1) to 0.44 g pot–1 (equivalent to 60% of the recommended rate). Fertilizer N retention rate was 7% higher while fertilizer N loss rate was 6% lower in EC1 than in EC0. Our study suggests that earthworm casts produced during oilseed rape-growing season are expected to have the following benefits on the subsequent flooded rice system: (1) improving growth and physiological processes in rice plants and consequently increasing rice grain yield, and (2) increasing fertilizer N retention rate and hence decreasing fertilizer N loss rate and reducing environmental risk. PMID:27880837

Investigating options for attenuating methane emission from Indian rice fields.

PubMed

Singh, S N; Verma, Amitosh; Tyagi, Larisha

2003-08-01

The development of methods and strategies to reduce the emission of methane from paddy fields is a central component of ongoing efforts to protect the Earth's atmosphere and to avert a possible climate change. It appears from this investigation that there can be more than one strategy to contain methane emission from paddy fields, which are thought to be a major source of methane emission in tropical Asia. Promising among the mitigating options may be water management, organic amendments, fertilizer application and selection of rice cultivars. It is always better to adopt multi-pronged strategies to contain CH4 efflux from rice wetlands. Use of fermented manures with low C/N ratio, application of sulfate-containing chemical fertilizers, selection of low CH4 emitting rice cultivars, and implementation of one or two short aeration periods before the heading stage can be effective options to minimize CH4 emission from paddy fields. Among these strategies, water management, which appears to be the best cost-effective and eco-friendly way for methane mitigation, is only possible when excess water is available for reflooding after short soil drying at the right timing and stage. However, in tropical Asia, rice fields are naturally flooded during the monsoonal rainy season and fully controlled drainage is often impossible. In such situation, water deficits during the vegetative and reproductive stage may drastically affect the rice yields. Thus, care must be taken to mitigate methane emission without affecting rice yields.

A Water Temperature Simulation Model for Rice Paddies With Variable Water Depths

NASA Astrophysics Data System (ADS)

Maruyama, Atsushi; Nemoto, Manabu; Hamasaki, Takahiro; Ishida, Sachinobu; Kuwagata, Tsuneo

2017-12-01

A water temperature simulation model was developed to estimate the effects of water management on the thermal environment in rice paddies. The model was based on two energy balance equations: for the ground and for the vegetation, and considered the water layer and changes in the aerodynamic properties of its surface with water depth. The model was examined with field experiments for water depths of 0 mm (drained conditions) and 100 mm (flooded condition) at two locations. Daily mean water temperatures in the flooded condition were mostly higher than in the drained condition in both locations, and the maximum difference reached 2.6°C. This difference was mainly caused by the difference in surface roughness of the ground. Heat exchange by free convection played an important role in determining water temperature. From the model simulation, the temperature difference between drained and flooded conditions was more apparent under low air temperature and small leaf area index conditions; the maximum difference reached 3°C. Most of this difference occurred when the range of water depth was lower than 50 mm. The season-long variation in modeled water temperature showed good agreement with an observation data set from rice paddies with various rice-growing seasons, for a diverse range of water depths (root mean square error of 0.8-1.0°C). The proposed model can estimate water temperature for a given water depth, irrigation, and drainage conditions, which will improve our understanding of the effect of water management on plant growth and greenhouse gas emissions through the thermal environment of rice paddies.

Crop performance and weed suppression by weed-suppressive rice cultivars in furrow- and flood-irrigated systems under reduced herbicide inputs

USDA-ARS?s Scientific Manuscript database

Weed control in rice is challenging, particularly in light of increased resistance to herbicides in weed populations and diminishing availability of irrigation water. Certain indica rice cultivars can produce high yields and suppress weeds in conventional flood-irrigated, drill-seeded systems in the...

Changing Use and Occurrence of Pesticides in Surface Waters of California's Rice-Growing Region

NASA Astrophysics Data System (ADS)

Orlando, J. L.; Hladik, M.; Smalling, K. L.; Kuivila, K.

2011-12-01

Pesticide use in rice agriculture in California has changed significantly over the past two decades. California is the second largest producer of rice in the United States and rice is a pesticide intensive crop with over 1.7 million kg of pesticide active ingredients applied in 2009. Prior to 1999, the herbicides molinate and thiobencarb were the most heavily used pesticides. Molinate was phased out in 2009, replaced primarily by propanil, the use of which exceeded 860,000 kg in that year. Over the same time period, use of thiobencarb has been in decline while applications of newer herbicides like clomazone have increased. The use of insecticides on rice has fallen by an order of magnitude over the last 20 years and now fluctuates around 4,500 kg per year. Another major change has been a steady increase in use of the fungicide azoxystrobin. Pesticides are applied either directly to the soil prior to planting and flooding of the fields, or a few weeks after flooding. Fields treated with thiobencarb or propanil are subject to holding times of 30 or 7 days, respectively, to allow for degradation prior to release of treated water to the environment. When rice-field water is released, it flows into local drains and creeks, and ultimately into Sacramento/San Joaquin Delta, a critical habitat for many threatened native species. A study was conducted in 2010 to measure the occurrence of rice pesticides Northern California, and to document how changes in rice pesticide application patterns over the last decade have influenced pesticide concentrations in the environment. Three sites in agriculturally dominated watersheds where rice is the major crop were sampled weekly from the time of initial rice-field flooding (mid-May) through mid-August. Filtered water samples were analyzed for 92 pesticides and pesticide degradates by gas chromatography/mass spectrometry. Azoxystrobin and 3,4-DCA (the major breakdown product of propanil) were detected in every sample, and at concentrations up to 136 and 128 μg/L, respectively. Clomazone and thiobencarb were detected in greater than 93% of water samples, with maximum concentrations of 19.4, and 12.4 μg/L. Propanil was present in 60% of samples and at a maximum concentration of 6.5 μg/L. The U.S. Environmental Protection Agency (EPA) has established chronic invertebrate toxicity benchmarks for concentrations of azoxystrobin, clomazone, and thiobencarb in water of 44, 2,200, and 1.0 μg/L, respectively. Concentrations of azoxystrobin and thiobencarb exceeded these benchmarks in one and three samples, respectively. The chronic fish toxicity benchmark of 9.1μg/L for propanil was not exceeded in any samples. Although the propanil degradate 3,4-DCA does not have established aquatic life benchmarks, EPA noted that it may be 11 and 7 times more toxic than the parent compound to freshwater invertebrates on an acute and chronic basis, respectively (2009 memo on Risks of Propanil Use to Federally Threatened California Red-legged Frog). This study illustrates the importance of understanding changing pesticide use and the resulting changes in pesticide concentrations in the environment.

Developing Automatic Water Table Control System for Reducing Greenhouse Gas Emissions from Paddy Fields

NASA Astrophysics Data System (ADS)

Arif, C.; Fauzan, M. I.; Satyanto, K. S.; Budi, I. S.; Masaru, M.

2018-05-01

Water table in rice fields play important role to mitigate greenhouse gas (GHG) emissions from paddy fields. Continuous flooding by maintenance water table 2-5 cm above soil surface is not effective and release more GHG emissions. System of Rice Intensification (SRI) as alternative rice farming apply intermittent irrigation by maintaining lower water table is proven can reduce GHG emissions reducing productivity significantly. The objectives of this study were to develop automatic water table control system for SRI application and then evaluate the performances. The control system was developed based on fuzzy logic algorithms using the mini PC of Raspberry Pi. Based on laboratory and field tests, the developed system was working well as indicated by lower MAPE (mean absolute percentage error) values. MAPE values for simulation and field tests were 16.88% and 15.80%, respectively. This system can save irrigation water up to 42.54% without reducing productivity significantly when compared to manual irrigation systems.

Arsenic accumulation in a paddy field in Bangladesh: seasonal dynamics and trends over a three-year monitoring period.

PubMed

Dittmar, Jessica; Voegelin, Andreas; Roberts, Linda C; Hug, Stephan J; Saha, Ganesh C; Ali, M Ashraf; Badruzzaman, A Borhan M; Kretzschmar, Ruben

2010-04-15

Shallow groundwater, often rich in arsenic (As), is widely used for irrigation of dry season boro rice in Bangladesh. In the long term, this may lead to increasing As contents in rice paddy soils, which threatens rice yields, food quality, and human health. The objective of this study was to quantify gains and losses of soil As in a rice paddy field during irrigation and monsoon flooding over a three-year period. Samples were collected twice a year on a 3D-sampling grid to account for the spatially heterogeneous As distribution within the soil. Gains and losses of soil As in different depth segments were calculated using a mass-balance approach. Annual As input with irrigation water was estimated as 4.4 +/- 0.4 kg ha(-1) a(-1). Within the top 40 cm of soil, the mean As accumulation over three years amounted to 2.4 +/- 0.4 kg ha(-1) a(-1), implying that on average 2.0 kg ha(-1) a(-1) were lost from the soil. Seasonal changes of soil As showed that 1.05 to 2.1 kg ha(-1) a(-1) were lost during monsoon flooding. The remaining As-loss (up to 0.95 kg ha(-1) a(-1)) was attributed to downward flow with percolating irrigation water. Despite these losses, we estimate that total As within the top 40 cm of soil at our field site would further increase by a factor of 1.5 to 2 by the year 2050 under current cultivation practices.

Rice methylmercury exposure and mitigation: a comprehensive review.

PubMed

Rothenberg, Sarah E; Windham-Myers, Lisamarie; Creswell, Joel E

2014-08-01

Rice cultivation practices from field preparation to post-harvest transform rice paddies into hot spots for microbial mercury methylation, converting less-toxic inorganic mercury to more-toxic methylmercury, which is likely translocated to rice grain. This review includes 51 studies reporting rice total mercury and/or methylmercury concentrations, based on rice (Orzya sativa) cultivated or purchased in 15 countries. Not surprisingly, both rice total mercury and methylmercury levels were significantly higher in polluted sites compared to non-polluted sites (Wilcoxon rank sum, p<0.001). However, rice percent methylmercury (of total mercury) did not differ statistically between polluted and non-polluted sites (Wilcoxon rank sum, p=0.35), suggesting comparable mercury methylation rates in paddy soil across these sites and/or similar accumulation of mercury species for these rice cultivars. Studies characterizing the effects of rice cultivation under more aerobic conditions were reviewed to determine the mitigation potential of this practice. Rice management practices utilizing alternating wetting and drying (instead of continuous flooding) caused soil methylmercury levels to spike, resulting in a strong methylmercury pulse after fields were dried and reflooded; however, it is uncertain whether this led to increased translocation of methylmercury from paddy soil to rice grain. Due to the potential health risks, it is advisable to investigate this issue further, and to develop separate water management strategies for mercury polluted and non-polluted sites, in order to minimize methylmercury exposure through rice ingestion. Copyright © 2014 Elsevier Inc. All rights reserved.

Rice Performance and Water Use Efficiency under Plastic Mulching with Drip Irrigation

PubMed Central

He, Haibing; Ma, Fuyu; Yang, Ru; Chen, Lin; Jia, Biao; Cui, Jing; Fan, Hua; Wang, Xin; Li, Li

2013-01-01

Plastic mulching with drip irrigation is a new water-saving rice cultivation technology, but little is known on its productivity and water-saving capacity. This study aimed to assess the production potential, performance, and water use efficiency (WUE) of rice under plastic mulching with drip irrigation. Field experiments were conducted over 2 years with two rice cultivars under different cultivation systems: conventional flooding (CF), non-flooded irrigation incorporating plastic mulching with furrow irrigation (FIM), non-mulching with furrow irrigation (FIN), and plastic mulching with drip irrigation (DI). Compared with the CF treatment, grain yields were reduced by 31.76–52.19% under the DI treatment, by 57.16–61.02% under the FIM treatment, by 74.40–75.73% under the FIN treatment, which were mainly from source limitation, especially a low dry matter accumulation during post-anthesis, in non-flooded irrigation. WUE was the highest in the DI treatment, being 1.52–2.12 times higher than with the CF treatment, 1.35–1.89 times higher than with the FIM treatment, and 2.37–3.78 times higher than with the FIN treatment. The yield contribution from tillers (YCFTs) was 50.65–62.47% for the CF treatment and 12.07–20.62% for the non-flooded irrigation treatments. These low YCFTs values were attributed to the poor performance in tiller panicles rather than the total tiller number. Under non-flooded irrigation, root length was significantly reduced with more roots distributed in deep soil layers compared with the CF treatment; the DI treatment had more roots in the topsoil layer than the FIM and FIN treatments. The experiment demonstrates that the DI treatment has greater water saving capacity and lower yield and economic benefit gaps than the FIM and FIN treatments compared with the CF treatment, and would therefore be a better water-saving technology in areas of water scarcity. PMID:24340087

Behavioral response of giant gartersnakes (Thamnophis gigas) to the relative availability of aquatic habitat on the landscape

USGS Publications Warehouse

Reyes, Gabriel A.; Halstead, Brian J.; Rose, Jonathan P.; Ersan, Julia S. M.; Jordan, Anna C.; Essert, Allison M.; Fouts, Kristen J.; Fulton, Alexandria M.; Gustafson, K. Benjamin; Wack, Raymond F.; Wylie, Glenn D.; Casazza, Michael L.

2017-11-16

Most extant giant gartersnake (Thamnophis gigas) populations persist in an agro-ecosystem dominated by rice, which serves as a surrogate to the expansive marshes lost to flood control projects and development of the Great Central Valley of California. Knowledge of how giant gartersnakes use the rice agricultural landscape, including how they respond to fallowing, idling, or crop rotations, would greatly benefit conservation of giant gartersnakes by informing more snake-friendly land and water management practices. We studied adult giant gartersnakes at 11 sites in the rice-growing regions of the Sacramento Valley during an extended drought in California to evaluate their response to differences in water availability at the site and individual levels. Although our study indicated that giant gartersnakes make little use of rice fields themselves, and avoid cultivated rice relative to its availability on the landscape, rice is a crucial component of the modern landscape for giant gartersnakes. Giant gartersnakes are strongly associated with the canals that supply water to and drain water from rice fields; these canals provide much more stable habitat than rice fields because they maintain water longer and support marsh-like conditions for most of the giant gartersnake active season. Nonetheless, our results suggest that maintaining canals without neighboring rice fields would be detrimental to giant gartersnake populations, with decreases in giant gartersnake survival rates associated with less rice production in the surrounding landscape. Increased productivity of prey populations, dispersion of potential predators across a larger landscape, and a more secure water supply are just some of the mechanisms by which rice fields might benefit giant gartersnakes in adjacent canals. Results indicate that identifying how rice benefits giant gartersnakes in canals and the extent to which the rice agro-ecosystem could provide these benefits when rice is fallowed would inform the use of water for other purposes without harm to giant gartersnakes. Our study also suggests that without such understanding, maintaining rice and associated canals in the Sacramento Valley is critical for the sustainability of giant gartersnake populations.

Arsenic uptake and accumulation in rice (Oryza sativa L.) with selenite fertilization and water management.

PubMed

Wan, Yanan; Camara, Aboubacar Younoussa; Huang, Qingqing; Yu, Yao; Wang, Qi; Li, Huafen

2018-07-30

The accumulation of arsenic (As) in rice grain is a potential threat to human health. Our study investigated the possible mediatory role of selenite fertilization on As uptake and accumulation by rice (Oryza sativa L.) under different water management regimes (aerobic or flooded) in a pot experiment. Soil solutions were also extracted during the growing season to monitor As dynamics. Results showed that As contents in the soil solutions, seedlings, and mature rice were higher under flooded than under aerobic water management. Under aerobic conditions, selenite additions slightly increased As concentrations in soil solutions (in the last two samplings), but decreased As levels in rice plants. Relative to the control, 0.5 mg kg -1 selenite decreased rice grain As by 27.5%. Under flooded conditions, however, selenite additions decreased As in soil solutions, while increased As in rice grain. Tendencies also showed that selenite additions decreased the proportion of As in rice shoots both at the seedling stage and maturity, and were more effective in aerobic soil. Our results demonstrate that the effect of selenite fertilizer on As accumulation by rice is related to water management. Copyright © 2018 Elsevier Inc. All rights reserved.

Use of clay to remediate cadmium contaminated soil under different water management regimes.

PubMed

Li, Jianrui; Xu, Yingming

2017-07-01

We examined in situ remediation of sepiolite on cadmium-polluted soils with diverse water regimes, and several variables including brown rice Cd, exchangeable Cd, pH, and available Fe/P. pH, available Fe/P in soils increased gradually during continuous flooding, which contributed to Cd absorption on colloids. In control group (untreated soils), compared to conventional irrigation, brown rice Cd in continuous flooding reduced by 37.9%, and that in wetting irrigation increased by 31.0% (p<0.05). In contrast to corresponding controls, brown rice Cd in sepiolite treated soils reduced by 44.4%, 34.5% and 36.8% under continuous flooding, conventional irrigation and wetting irrigation (p<0.05), and exchangeable Cd in amended soils reduced by 27.5-49.0%, 14.3-40.5%, and 24.9-32.8% under three water management regimes (p<0.05). Compared to corresponding controls, decreasing amplitudes of exchangeable Cd and brown rice Cd in sepiolite treated soils were higher in continuous flooding than in conventional irrigation and wetting irrigation. Continuous flooding management promoted soil Cd immobilization by sepiolite. Copyright © 2017. Published by Elsevier Inc.

Comparison of CH4 Emission from Rice Paddy Soils between Coastal Zone and Inland Regions

NASA Astrophysics Data System (ADS)

Sun, M.; Li, X.

2016-12-01

Numerous measurements of methane (CH4) emission fluxes have been carried out in rice paddy soil between coastal zone and inland regions. However, the differences of CH4 emission from rice paddy soils in these two locations were unavailable. A database of CH4 emission in paddy rice was compiled from previous published references and field observations with major parameters including water regimes, fertilizer application, CH4 fluxes, and environmental variables. Results showed that CH4 emission from inland paddy fields was significantly higher than that in the coastal zone (p < 0.05). Fertilizer application and water management played an important role in CH4 emission. The application of organic fertilizer and continuous flooding significantly promoted CH4 emission from paddy fields. CH4 fluxes showed significantly positive correlations with organic matter, total nitrogen, available potassium and annual temperature (R2 = 0.39, 0.53, 0.27 and 0.23, p < 0.05), and negative correlations with pH and available phosphorus (R2 = 0.29 and 0.37, p < 0.05). Significant differences occurred in available potassium between inland and coastal rice paddy (p < 0.05), which might account for the difference of CH4 emission between inland and coastal rice paddy. The contrasting of CH4 fluxes between inland and coastal wetlands could improve our understanding of the roles of rice paddies in the regional CH4 regulation. Our results also have implications for informing rice paddy management and climate change policy making the efforts being made by agricultural organizations and enterprises to restore coastal rice paddies for mitigating CH4 emissions.

Taxocoenosis and distribution of nektonic fauna in the rice fields of Kashmir (J and K) India.

PubMed

Bahaar, S W N; Bhat, G A

2011-04-15

Present study attempts to identify the taxocoenosis and distribution of nektonic fauna harbouring the rice field ecosystems of Kashmir. The main objective of the study was to provide an overview of the nektonic community composition and physicochemical characteristics of flood waters. 6 sites were selected in Kupwara, Bandipora, Budgam, Srinagar, Pulwama and Anantnag districts of valley Kashmir. A total of 26 taxa belonging to 13 different orders were reported during the study which commenced through 2 consecutive crop cycles. The taxocoenosis was dominated by Coleoptera (10 taxa) followed by Hemiptera (3 taxa), Diptera (2 taxa), Diplostraca (2 taxa), Acarina, Anostraca, Anura, Amphipoda, Basommatophora, Cypriniformes, Cyprinodontiformes, Odonata and Pulmonata (1 taxa each). Diversity was calculated using Simpsons Index (D), Simpsons Index of Diversity (1-D), Simpsons Reciprocal Index (1/D), Shannon-Weiner Index (H'), Margalef Richness Index (d) and Evenness Index (e). Kupwara (34 degrees 02'N; 74 degrees 16'E) formed the most diverse site registering a total of 2384 individuals belonging to 24 taxa. A perusal of the primary data related to the physicochemical attributes of flood waters exhibited that average water temperature varied between 19-30 degrees C, average air temperature varied between 21 and 33 degrees C. pH depicted a variation between 6.0 and 9.0, Dissolved Oxygen varied between a minimum of 1.0 mg L(-1) and a maximum of 10 mg L(-1). Free CO2 ranged between 0 mg L(-1) and 6.1 mg(-1). The results pressed the need for recognizing and preserving rice fields as potential habitats for organisms that have successfully adapted to the highly manipulated and eutrophic conditions of rice paddies.

Microbial-driven arsenic cycling in rice paddies amended with monosodium methanearsonate

NASA Astrophysics Data System (ADS)

Maguffin, S. C.; McClung, A.; Rohila, J. S.; Derry, L. A.; Huang, R.; Reid, M. C.

2017-12-01

Rice consumption is the second largest contributor to human arsenic exposure worldwide and is linked to many serious diseases. Because rice is uniquely adapted for agricultural production under flooded soils, arsenic species solubilized in such environments can be effectively transported into plant tissue via root transporters. Through this process, both inorganic and organic (methylated) arsenic species can accumulate to problematic concentrations and may affect grain yield as well as crop value. The distribution of these species in plant tissue is determined by arsenic sources, as well as enzymatic redox and methylation-demethylation reactions in soils and pore water. Historic use of organoarsenic-based pesticides in US agriculture may provide an enduring source of arsenic in rice paddies. However, it is unclear how persistent these organic species are in the adsorbed phase or how available they remain to rice cultivars throughout the growing season. We conducted a field experiment in a 2x2 factorial design examining the effects of irrigation methods (continuous flooding and alternate wetting and drying) and monosodium methanearsonate (MSMA) application on the abundance and speciation of arsenic in pore water, soil, and rice plant tissues. We monitored arsenic speciation and partitioning between these reservoirs at semi-weekly to semi-monthly frequencies. Pore water arsenic speciation was determined using LC-ICP-MS, and X-ray absorption near-edge structure (XANES) analysis was employed to speciate the arsenic within solid-phase soil and plant tissue throughout the growing season. These data help clarify the role of two irrigation methods and MSMA amendments for arsenic bioavailability and speciation in rice. Furthermore, the study illuminates the significance of microbial metabolism in the reapportionment of arsenic within the soil-plant-water system and its impact on arsenic levels in rice grains.

Characterization of mercury species in brown and white rice (Oryza sativa L.) grown in water-saving paddies.

PubMed

Rothenberg, Sarah E; Feng, Xinbin; Dong, Bin; Shang, Lihai; Yin, Runsheng; Yuan, Xiaobo

2011-05-01

In China, total Hg (HgT) and methylmercury (MeHg) were quantified in rice grain grown in three sites using water-saving rice cultivation methods, and in one Hg-contaminated site, where rice was grown under flooded conditions. Polished white rice concentrations of HgT (water-saving: 3.3±1.6 ng/g; flooded: 110±9.2 ng/g) and MeHg (water-saving 1.3±0.56 ng/g; flooded: 12±2.4 ng/g) were positively correlated with root-soil HgT and MeHg contents (HgT: r2=0.97, MeHg: r2=0.87, p<0.05 for both), which suggested a portion of Hg species in rice grain was derived from the soil, and translocation of Hg species from soil to rice grain was independent of irrigation practices and Hg levels, although other factors may be important. Concentrations of HgT and other trace elements were significantly higher in unmilled brown rice (p<0.05), while MeHg content was similar (p>0.20), indicating MeHg infiltrated the endosperm (i.e., white rice) more efficiently than inorganic Hg(II). Copyright © 2011 Elsevier Ltd. All rights reserved.

Methylmercury production in and export from agricultural wetlands in California, USA: the need to account for physical transport processes into and out of the root zone

USGS Publications Warehouse

Bachand, Philip A.M.; Bachand, Sandra M.; Fleck, Jacob A.; Alpers, Charles N.; Stephenson, Mark; Windham-Myers, Lisamarie

2014-01-01

Concentration and mass balance analyses were used to quantify methylmercury (MeHg) loads from conventional (white) rice, wild rice, and fallowed fields in northern California's Yolo Bypass. These analyses were standardized against chloride to distinguish transport pathways and net ecosystem production (NEP). During summer, chloride loads were both exported with surface water and moved into the root zone at a 2:1 ratio. MeHg and dissolved organic carbon (DOC) behaved similarly with surface water and root zone exports at ~ 3:1 ratio. These trends reversed in winter with DOC, MeHg, and chloride moving from the root zone to surface waters at rates opposite and exceeding summertime root zone fluxes. These trends suggest that summer transpiration advectively moves constituents from surface water into the root zone, and winter diffusion, driven by concentration gradients, subsequently releases those constituents into surface waters. The results challenge a number of paradigms regarding MeHg. Specifically, biogeochemical conditions favoring microbial MeHg production do not necessarily translate to synchronous surface water exports; MeHg may be preserved in the soils allowing for release at a later time; and plants play a role in both biogeochemistry and transport. Our calculations show that NEP of MeHg occurred during both summer irrigation and winter flooding. Wild rice wet harvesting and winter flooding of white rice fields were specific practices that increased MeHg export, both presumably related to increased labile organic carbon and disturbance. Outflow management during these times could reduce MeHg exports. Standardizing MeHg outflow:inflow concentration ratios against natural tracers (e.g. chloride, EC) provides a simple tool to identify NEP periods. Summer MeHg exports averaged 0.2 to 1 μg m− 2 for the different agricultural wetland fields, depending upon flood duration. Average winter MeHg exports were estimated at 0.3 μg m− 2. These exports are within the range reported for other shallow aquatic systems.

Methylmercury production in and export from agricultural wetlands in California, USA: the need to account for physical transport processes into and out of the root zone.

PubMed

Bachand, P A M; Bachand, S M; Fleck, J A; Alpers, C N; Stephenson, M; Windham-Myers, L

2014-02-15

Concentration and mass balance analyses were used to quantify methylmercury (MeHg) loads from conventional (white) rice, wild rice, and fallowed fields in northern California's Yolo Bypass. These analyses were standardized against chloride to distinguish transport pathways and net ecosystem production (NEP). During summer, chloride loads were both exported with surface water and moved into the root zone at a 2:1 ratio. MeHg and dissolved organic carbon (DOC) behaved similarly with surface water and root zone exports at ~3:1 ratio. These trends reversed in winter with DOC, MeHg, and chloride moving from the root zone to surface waters at rates opposite and exceeding summertime root zone fluxes. These trends suggest that summer transpiration advectively moves constituents from surface water into the root zone, and winter diffusion, driven by concentration gradients, subsequently releases those constituents into surface waters. The results challenge a number of paradigms regarding MeHg. Specifically, biogeochemical conditions favoring microbial MeHg production do not necessarily translate to synchronous surface water exports; MeHg may be preserved in the soils allowing for release at a later time; and plants play a role in both biogeochemistry and transport. Our calculations show that NEP of MeHg occurred during both summer irrigation and winter flooding. Wild rice wet harvesting and winter flooding of white rice fields were specific practices that increased MeHg export, both presumably related to increased labile organic carbon and disturbance. Outflow management during these times could reduce MeHg exports. Standardizing MeHg outflow:inflow concentration ratios against natural tracers (e.g. chloride, EC) provides a simple tool to identify NEP periods. Summer MeHg exports averaged 0.2 to 1 μg m(-2) for the different agricultural wetland fields, depending upon flood duration. Average winter MeHg exports were estimated at 0.3 μg m(-2). These exports are within the range reported for other shallow aquatic systems. Copyright © 2013 Elsevier B.V. All rights reserved.

Growth promotion and inhibition of the Amazonian wild rice species Oryza grandiglumis to survive flooding.

PubMed

Okishio, Takuma; Sasayama, Daisuke; Hirano, Tatsuya; Akimoto, Masahiro; Itoh, Kazuyuki; Azuma, Tetsushi

2014-09-01

In Asian cultivated rice (Oryza sativa), distinct mechanisms to survive flooding are activated in two groups of varieties. Submergence-tolerant rice varieties possessing the SUBMERGENCE1A (SUB1A) gene display reduced growth during flash floods at the seedling stage and resume growth after the flood recedes, whereas deepwater rice varieties possessing the SNORKEL1 (SK1) and SNORKEL2 (SK2) genes display enhanced growth based on internodal elongation during prolonged submergence at the mature stage. In this study, we investigated the occurrence of these growth responses to submergence in the wild rice species Oryza grandiglumis, which is native to the Amazon floodplains. When subjected to gradual submergence, adult plants of O. grandiglumis accessions showed enhanced internodal elongation with rising water level and their growth response closely resembled that of deepwater varieties of O. sativa with high floating capacity. On the other hand, when subjected to complete submergence, seedlings of O. grandiglumis accessions displayed reduced shoot growth and resumed normal growth after desubmergence, similar to the response of submergence-tolerant varieties of O. sativa. Neither SUB1A nor the SK genes were detected in the O. grandiglumis accessions. These results indicate that the O. grandiglumis accessions are capable of adapting successfully to flooding by activating two contrasting mechanisms as the situation demands and that each mechanism of adaptation to flooding is not mediated by SUB1A or the SK genes.

Dynamics of the Methanogenic Archaeal Community during Plant Residue Decomposition in an Anoxic Rice Field Soil ▿

PubMed Central

Peng, Jingjing; Lü, Zhe; Rui, Junpeng; Lu, Yahai

2008-01-01

Incorporation of plant residues strongly enhances the methane production and emission from flooded rice fields. Temperature and residue type are important factors that regulate residue decomposition and CH4 production. However, the response of the methanogenic archaeal community to these factors in rice field soil is not well understood. In the present experiment, the structure of the archaeal community was determined during the decomposition of rice root and straw residues in anoxic rice field soil incubated at three temperatures (15°C, 30°C, and 45°C). More CH4 was produced in the straw treatment than root treatment. Increasing the temperature from 15°C to 45°C enhanced CH4 production. Terminal restriction fragment length polymorphism analyses in combination with cloning and sequencing of 16S rRNA genes showed that Methanosarcinaceae developed early in the incubations, whereas Methanosaetaceae became more abundant in the later stages. Methanosarcinaceae and Methanosaetaceae seemed to be better adapted at 15°C and 30°C, respectively, while the thermophilic Methanobacteriales and rice cluster I methanogens were significantly enhanced at 45°C. Straw residues promoted the growth of Methanosarcinaceae, whereas the root residues favored Methanosaetaceae. In conclusion, our study revealed a highly dynamic structure of the methanogenic archaeal community during plant residue decomposition. The in situ concentration of acetate (and possibly of H2) seems to be the key factor that regulates the shift of methanogenic community. PMID:18344350

Internal aeration of paddy field rice (Oryza sativa) during complete submergence---importance of light and floodwater O2.

PubMed

Winkel, Anders; Colmer, Timothy D; Ismail, Abdelbagi M; Pedersen, Ole

2013-03-01

Flash floods can submerge paddy field rice (Oryza sativa), with adverse effects on internal aeration, sugar status and survival. Here, we investigated the in situ aeration of roots of rice during complete submergence, and elucidated how underwater photosynthesis and floodwater pO(2) influence root aeration in anoxic soil. In the field, root pO(2) was measured using microelectrodes during 2 d of complete submergence. Leaf gas films that formed on the superhydrophobic leaves were left intact, or experimentally removed, to elucidate their effect on internal aeration. In darkness, root pO(2) declined to very low concentrations (0.24 kPa) and was strongly correlated with floodwater pO(2). In light, root pO(2) was high (14 kPa) and primarily a function of the incident light determining the rates of underwater net photosynthesis. Plants with intact leaf gas films maintained higher underwater net photosynthesis relative to plants without gas films when the submerged shoots were in light. During complete submergence, internal aeration of rice in the field relies on underwater photosynthesis during the day and entry of O(2) from the floodwater during the night. Leaf gas films enhance photosynthesis during submergence leading to improved O(2) production and sugar status, and therefore contribute to the submergence tolerance of rice. © 2012 The Authors. New Phytologist © 2012 New Phytologist Trust.

Herbicide options for effective weed management in dry direct-seeded rice under scented rice-wheat rotation of western Indo-Gangetic Plains.

PubMed

Singh, Vijay; Jat, Mangi L; Ganie, Zahoor A; Chauhan, Bhagirath S; Gupta, Raj K

2016-03-01

Farmers' participatory field trials were conducted at Madhuban, and Taraori, the two participatory experimental sites/locations of the Cereal Systems Initiative for South Asia (CSISA), a collaborative project of IRRI and CIMMYT in Karnal district of Haryana, India, during Kharif (wet season) 2010 and 2011. This research aimed to evaluate preemergence (PRE) and postemergence (POST) herbicides for providing feasible and economically viable weed management options to farmers for predominant scented rice varieties. Treatments with pendimethalin PRE fb bispyribac-sodium + azimsulfuron POST had lower weed biomass at 45 days after sowing (DAS). At Madhuban, highest grain yield of scented basmati rice (3.43 t ha -1 ) was recorded with the sequential application of pendimethalin PRE fb bispyribac-sodium + azimsulfuron POST. However, at Taraori, yields were similar with pendimethalin or oxadiargyl PRE fb bispyribac-sodium and/or azimsulfuron POST. Applying oxadiargyl by mixing with sand onto flooded field was less effective than spray applications in non-flooded field. The benefit-cost ratio of rice crop was higher with herbicide treatments at both sites as compared with the non-treated weed-free check except single PRE and POST applications and sequential application of oxadiargyl PRE fb oxadiargyl PRE. In a separate experiment conducted at Nagla and Taraori sites, scented rice cultivars' ('CSR 30' and 'Pusa 1121') tolerance to three rates of azimsulfuron (15, 25, and 35 g ai ha -1 ) was evaluated over two years (2010 and 2011). CSR 30 (superfine, scented) was more sensitive to higher rates (35 g ai ha -1 ) of azimsulfuron as compared to Pusa 1121 (fine, scented). Crop injuries were 8 and 28% in case of CSR 30; 5 and 15% in Pusa 1121 when applied with azimsulfuron 25 and 35 g ai ha -1 , respectively. Azimsulfuron applied at 35 g ai ha -1 reduced yield in both cultivars but in CSR 30 yield reduction was twofold (11.5%) as that of Pusa 1121 (5.2%).

Herbicide options for effective weed management in dry direct-seeded rice under scented rice-wheat rotation of western Indo-Gangetic Plains

PubMed Central

Singh, Vijay; Jat, Mangi L.; Ganie, Zahoor A.; Chauhan, Bhagirath S.; Gupta, Raj K.

2016-01-01

Farmers' participatory field trials were conducted at Madhuban, and Taraori, the two participatory experimental sites/locations of the Cereal Systems Initiative for South Asia (CSISA), a collaborative project of IRRI and CIMMYT in Karnal district of Haryana, India, during Kharif (wet season) 2010 and 2011. This research aimed to evaluate preemergence (PRE) and postemergence (POST) herbicides for providing feasible and economically viable weed management options to farmers for predominant scented rice varieties. Treatments with pendimethalin PRE fb bispyribac-sodium + azimsulfuron POST had lower weed biomass at 45 days after sowing (DAS). At Madhuban, highest grain yield of scented basmati rice (3.43 t ha−1) was recorded with the sequential application of pendimethalin PRE fb bispyribac-sodium + azimsulfuron POST. However, at Taraori, yields were similar with pendimethalin or oxadiargyl PRE fb bispyribac-sodium and/or azimsulfuron POST. Applying oxadiargyl by mixing with sand onto flooded field was less effective than spray applications in non-flooded field. The benefit-cost ratio of rice crop was higher with herbicide treatments at both sites as compared with the non-treated weed-free check except single PRE and POST applications and sequential application of oxadiargyl PRE fb oxadiargyl PRE. In a separate experiment conducted at Nagla and Taraori sites, scented rice cultivars' ('CSR 30′ and 'Pusa 1121′) tolerance to three rates of azimsulfuron (15, 25, and 35 g ai ha−1) was evaluated over two years (2010 and 2011). CSR 30 (superfine, scented) was more sensitive to higher rates (35 g ai ha−1) of azimsulfuron as compared to Pusa 1121 (fine, scented). Crop injuries were 8 and 28% in case of CSR 30; 5 and 15% in Pusa 1121 when applied with azimsulfuron 25 and 35 g ai ha−1, respectively. Azimsulfuron applied at 35 g ai ha−1 reduced yield in both cultivars but in CSR 30 yield reduction was twofold (11.5%) as that of Pusa 1121 (5.2%). PMID:26941471

Application of Azolla and intermittent irrigation to improve the productivity and nutrient contents of local black rice variety

NASA Astrophysics Data System (ADS)

Sulandjari; Yunindanova, M. B.

2018-03-01

Black rice is a local rice variety that contains a high level of anthocyanin pigment. Anthocyanin has been reported to be very effective in reducing cholesterol levels as well as cancer cell invasion. One of the main problems in rice cultivation is lack of water. System of Rice Intensification (SRI) has shown to be able to increase rice productivity by increasing the number of tillers. This system is known as a water-efficient cultivation. Other rice cultivation barrier is related to the use of nitrogen fertilizer. One of replacement of nitrogen fertilizer is by adding azolla. The objective of this research was identifying growth and yield of organic black rice with intermittent irrigation and application of azolla. The plant material used was black rice Cempo variety from Sleman, Yogyakarta. This experiment utilized 4 dosages of azolla as the first treatment: 100 gm-2, 200 gm-2 and 400 gm-2. The second treatment was water supply consisted of continuous flooded 2 cm; flooded 2 cm every 3 days; flooded 2 cm every 6 days. The results depicted that the application of azolla was able to increase the growth of black rice. Azolla of 200 gm-2 and 400 gm-2 and intermittent 3 days to 6 days generated higher dry grain, anthocyanin and antioxidant. Azolla 200 gm-2 with intermittent irrigation 3 days could be a good combination to improve plant growth, yield and properties of local black rice.

Reducing greenhouse gas emissions, water use, and grain arsenic levels in rice systems.

PubMed

Linquist, Bruce A; Anders, Merle M; Adviento-Borbe, Maria Arlene A; Chaney, Rufus L; Nalley, L Lanier; da Rosa, Eliete F F; van Kessel, Chris

2015-01-01

Agriculture is faced with the challenge of providing healthy food for a growing population at minimal environmental cost. Rice (Oryza sativa), the staple crop for the largest number of people on earth, is grown under flooded soil conditions and uses more water and has higher greenhouse gas (GHG) emissions than most crops. The objective of this study was to test the hypothesis that alternate wetting and drying (AWD--flooding the soil and then allowing to dry down before being reflooded) water management practices will maintain grain yields and concurrently reduce water use, greenhouse gas emissions and arsenic (As) levels in rice. Various treatments ranging in frequency and duration of AWD practices were evaluated at three locations over 2 years. Relative to the flooded control treatment and depending on the AWD treatment, yields were reduced by <1-13%; water-use efficiency was improved by 18-63%, global warming potential (GWP of CH4 and N2 O emissions) reduced by 45-90%, and grain As concentrations reduced by up to 64%. In general, as the severity of AWD increased by allowing the soil to dry out more between flood events, yields declined while the other benefits increased. The reduction in GWP was mostly attributed to a reduction in CH4 emissions as changes in N2 O emissions were minimal among treatments. When AWD was practiced early in the growing season followed by flooding for remainder of season, similar yields as the flooded control were obtained but reduced water use (18%), GWP (45%) and yield-scaled GWP (45%); although grain As concentrations were similar or higher. This highlights that multiple environmental benefits can be realized without sacrificing yield but there may be trade-offs to consider. Importantly, adoption of these practices will require that they are economically attractive and can be adapted to field scales. © 2014 John Wiley & Sons Ltd.

Linking canopy reflectance to crop structure and photosynthesis to capture and interpret spatiotemporal dimensions of per-field photosynthetic productivity

NASA Astrophysics Data System (ADS)

Xue, Wei; Jeong, Seungtaek; Ko, Jonghan; Tenhunen, John

2017-03-01

Nitrogen and water availability alter canopy structure and physiology, and thus crop growth, yielding large impacts on ecosystem-regulating/production provisions. However, to date, explicitly quantifying such impacts remains challenging partially due to lack of adequate methodology to capture spatial dimensions of ecosystem changes associated with nitrogen and water effects. A data fitting, where close-range remote-sensing measurements of vegetation indices derived from a handheld instrument and an unmanned aerial vehicle (UAV) system are linked to in situ leaf and canopy photosynthetic traits, was applied to capture and interpret inter- and intra-field variations in gross primary productivity (GPP) in lowland rice grown under flooded conditions (paddy rice, PD) subject to three nitrogen application rates and under rainfed conditions (RF) in an East Asian monsoon region of South Korea. Spatial variations (SVs) in both GPP and light use efficiency (LUEcabs) early in the growing season were enlarged by nitrogen addition. The nutritional effects narrowed over time. A shift in planting culture from flooded to rainfed conditions strengthened SVs in GPP and LUEcabs. Intervention of prolonged drought late in the growing season dramatically intensified SVs that were supposed to seasonally decrease. Nevertheless, nitrogen addition effects on SV of LUEcabs at the early growth stage made PD fields exert greater SVs than RF fields. SVs of GPP across PD and RF rice fields were likely related to leaf area index (LAI) development less than to LUEcabs, while numerical analysis suggested that considering strength in LUEcabs and its spatial variation for the same crop type tends to be vital for better evaluation in landscape/regional patterns of ecosystem photosynthetic productivity at critical phenology stages.

Testing climate-smart irrigation strategies to reduce methane emissions from rice fields

NASA Astrophysics Data System (ADS)

Runkle, B.; Suvocarev, K.; Reba, M. L.

2017-12-01

Approximately 11% of the global 308 Tg CH4 anthropogenic emissions are currently attributed to rice cultivation. In this study, the impact of water conservation practices on rice field CH4 emissions was evaluated in Arkansas, the leading state in US rice cultivation. While conserving water, the Alternate Wetting and Drying (AWD) irrigation practice can also reduce CH4 emissions through the deliberate, periodic introduction of aerobic conditions. Seasonal CH4emissions from a pair of adjacent, production-sized rice fields were estimated and compared during the 2015 to 2017 growing seasons using the eddy covariance method on each field. The fields were alternately treated with continuous flood (CF) and AWD irrigation. In 2015, the seasonal cumulative carbon losses by CH4 emission were 30.3 ± 6.3 and 141.9 ± 8.6 kg CH4-C ha-1 for the AWD and CF treatments, respectively. Data from 2016 and 2017 will be analyzed and shown within this presentation; an initial view demonstrates consistent findings to 2015. When accounting for differences in field conditions and soils, the AWD practice is attributable to a 36-51% reduction in seasonal emissions. The substantial decrease in CH4 emissions by AWD supports previous chamber-based research and offers strong evidence for the efficacy of AWD in reducing CH4 emissions in Arkansas rice production. The AWD practice has enabled the sale of credits for carbon offsets trading and this new market could encourage CH4 emissions reductions on a national scale. These eddy covariance towers are being placed into a regional perspective including crop and forest land in the three states comprising the Mississippi Delta: Arkansas, Mississippi, and Louisiana.

Durability of Drainage Improvement by Combination of Main Drain and Trench Drains with Vertical Drains in Clayey Field Converted from Paddy to Upland Use

NASA Astrophysics Data System (ADS)

Adachi, Kazuhide; Ohno, Satoshi; Furuhata, Masami; Ogura, Chikara; Tanimoto, Takeshi

The drainage efficiency of a subsurface drainage system for avoidance of standing water on the plow pan of clayey field was evaluated. A subsurface drainage system with a main drain and orthogonally adjoined rice husk trench drains joined by vertical rice husk drains was constructed on a test plot and compared to an identical control plot of paddy field converted to upland use under soybean cultivation. The ratio of total underdrain discharge to rainfall in the improved plot greatly increased over two years compared to that in a control plot. In the improved plot, the peak underdrain discharge per hour associated with some heavy rainfalls was around 3 mm/h in the first year but decreased to about 2 mm/h in the second year. By improving drainage in the paddy field, standing water on the plow pan was quickly eliminated after rain events and the period of flooding on the plow pan during the soybean growing season was greatly reduced. However, underdrain discharge in the improved plot decreased greatly in the third year to be at the same level as in the control plot, and rain water flooded the plow pan for extended periods of time.

Efficient phosphorus management practices in the Everglades Agricultural Area

NASA Astrophysics Data System (ADS)

Bhadha, J. H.; Lang, T. A.; Daroub, S. H.; Alvarez, O.; Tootoonchi, M.; Capasso, J.

2016-12-01

In the 450,000 acres of the Everglades Agricultural Area (EAA) of South Florida, farming practices have long been mindful of phosphorus (P) management as it relates to sufficiency and efficiency of P utilization. Over two decades of P best management practices have resulted in 3001 metric-ton of P load reduction from the EAA to downstream ecosystems. During the summer, more than 50,000 acres of fallow sugarcane land is available for rice production. The net value of growing flooded rice in the EAA as a rotational crop with sugarcane far exceeds its monetary return. Soil conservation, improvement in tilth and P load reduction are only some of the benefits. With no P fertilizer applied, a two-year field trial on flooded rice showed improved outflow P concentrations by up to 40% as a result of particulate setting and plant P uptake. Harvested whole grain rice can effectively remove a significant amount of P from a rice field per growing season. In parts of the EAA where soils are sandy, the application of using locally derived organic amendments as potential P fertilizer has gained interest over the past few years. The use of local agricultural and urban organic residues as amendments in sandy soils of South Florida provide options to enhance soil properties and improve sugarcane yields, while reducing waste and harmful effects of agricultural production on the environment. A lysimeter study conducted to determine the effect of mill ash and three types of biochar (rice hulls, yard waste, horse bedding) on sugarcane yields, soil properties, and drainage water quality in sandy soils showed that mill ash and rice hull biochar increased soil TP, Mehlich 3-P (M3-P), and cation exchange capacity (CEC) compared to the control. TP and M3-P content remained constant after 9 months, CEC showed a significant increase over time with rich hull biochar addition. Future projects include the utilization of aquatic vegetation, such as chara and southern naiad as bio-filters in farm ditches to reduce P load. This will be achieved by circulating high P concentration farm canal water through the ditches prior to being discharged off site. Optimizing the flow through the ditches will allow the aquatic vegetation to uptake P. The vegetation will ultimately be harvested and incorporated back on to the fields.

[Effect of flooding time length on mycorrhizal colonization of three AM fungi in two wetland plants].

PubMed

Ma, Lei-Meng; Wang, Peng-Teng; Wang, Shu-Guang

2014-01-01

In order to provide information for elucidating effect of flooding on the formation and function of AM in wetland plants, three AM fungi (Glomus intraradices, Glomus versiforme, Glomus etunicatum) were used to investigate the effects of flooding time length on their colonization in cattail (Typha orientalis) and rice (Oryza sativa L. ). The results showed that the mycorrhizal colonization rate (MCR) presented downtrend with increasing flooding time length. In cattail, MCR of the fungus F3 was higher than those of fungi F1 and F2, but no significant difference in MCR was found between fungi F1 and F2. In rice, the MCRs of fungi F2 and F3 were higher than that of E1. In both plants, the proportional frequency of hyphae was the highest while the proportional frequency of arbuscules and vesicles was very low in all treatments, indicating that hyphal colonization was the main route for AM formation. The proportional frequency of hyphae in cattail increased with the flooding time length, but no significant trend was observed in rice plant. The proportional frequency of arhuscules decreased with the increase of flooding time, and was the highest in the treatment without flooding (treatment IV). The number of spores produced by AM fungi increased with increasing flooding time, and reached the highest in the treatment of long time flooding (treatment I). In the same treatment, the fungus F3 produced more spores than fungi F1 and F2. Changes in wet weight of the two plants showed that AM could increase cattail growth under flooding, hut little effect on rice growth was found. It is concluded that flooding time length significantly affected the mycorrhizal colonization rate and the proportional frequency of colonization. AM could enhance the growth of wetland plant, but this depends on the mycorrhizal dependence of host plant on AM fungi. Therefore, flooding time length should be considered in the inoculation of wetland plants with AM fungi.

Long term continuous field survey to assess nutrient emission impact from irrigated paddy field into river catchment

NASA Astrophysics Data System (ADS)

Kogure, Kanami; Aichi, Masaatsu; Zessner, Matthias

2017-04-01

In order to achieve good river environment, it is very important to understand and to control nutrient behavior such as Nitrogen and Phosphorus. As we could reduce impact from urban and industrial activities by wastewater treatment, pollution from point sources are likely to be controlled. Besides them, nutrient emission from agricultural activity is dominant pollution source into the river system. In many countries in Asia and Africa, rice is widely cultivated and paddy field covers large areas. In Japan 54% of its arable land is occupied with irrigated paddy field. While paddy field can deteriorate river water quality due to fertilization, it is also suggested that paddy field can purify water. We carried out field survey in middle reach of the Tone River Basin with focus on a paddy field IM. The objectives of the research are 1) understanding of water and nutrient balance in paddy field, 2) data collection for assessing nutrient emission. Field survey was conducted from June 2015 to October 2016 covering two flooding seasons in summer. In our measurement, all input and output were measured regarding water, N and P to quantify water and nutrient balance in the paddy field. By measuring water quality and flow rate of inflow, outflow, infiltrating water, ground water and flooding water, we tried to quantitatively understand water, N and P cycle in a paddy field including seasonal trends, and changes accompanied with rainy events and agricultural activities like fertilization. Concerning water balance, infiltration rate was estimated by following equation. Infiltration=Irrigation water + Precipitation - Evapotranspiration -Outflow We estimated mean daily water balance during flooding season. Infiltration is 11.9mm/day in our estimation for summer in 2015. Daily water reduction depth (WRD) is sum of Evapotranspiration and Infiltration. WRD is 21.5mm/day in IM and agrees with average value in previous research. Regarding nutrient balance, we estimated an annual N and P balance. N and P surplus are calculated by difference between input and output in a paddy field. As to nutrient balance in 2015 surplus shows minus value between input as fertilizer and output as rice product. However, by taking account of input via irrigation water as nutrient source, N and P input and output balance with errors by 9% and 14%. Results of long term continuous survey suggest that irrigation water is one of nutrient sources in rice cultivation.

Root distribution and potential interactions between allelopathic rice, sprangletop (Leptochloa spp.), and barnyardgrass (Echinochloa crus-galli) based on ¹³C isotope discrimination analysis.

PubMed

Gealy, David; Moldenhauer, Karen; Duke, Sara

2013-02-01

Weed-suppressive rice cultivars hold promise for improved and more economical weed management in rice. Interactions between roots of rice and weeds are thought to be modulated by the weed-suppressive activity of some rice cultivars, but these phenomena are difficult to measure and not well understood. Thus, above-ground productivity, weed suppression, and root distribution of 11 rice cultivars and two weed species were evaluated in a drill-seeded, flood-irrigated system at Stuttgart, Arkansas, USA in a two-year study. The allelopathic cultivars, PI 312777 and Taichung Native 1 (TN-1), three other weed-suppressive cultivars, three indica-derived breeding selections, and three non-suppressive commercial cultivars were evaluated in field plots infested with barnyardgrass (Echinochloa crus-galli (L.) Beauv.) or bearded sprangletop (sprangletop, Leptochloa fusca (L.) Kunth var. fascicularis (Lam.) N. Snow). The allelopathic cultivars produced more tillers and suppressed both weed species to a greater extent than did the breeding selections or the non-suppressive cultivars. (13)C isotope discrimination analysis of mixed root samples to a depth of 15 cm revealed that the allelopathic cultivars typically produced a greater fraction of their total root mass in the surface 0-5 cm of soil depth compared to the breeding selections or the non-suppressive cultivars, which tended to distribute their roots more evenly throughout the soil profile. These trends in root mass distribution were apparent at both early (pre-flood) and late-season stages in weed-free and weed-infested plots. Cultivar productivity and root distribution generally responded similarly to competition with the two weed species, but barnyardgrass reduced rice yield and root mass more than did sprangletop. These findings demonstrate for the first time that roots of the allelopathic cultivars PI 312777 and TN-1 explore the upper soil profile more thoroughly than do non-suppressive cultivars under weed-infested and weed-free conditions in flood-irrigated U.S. rice production systems. They raise the interesting prospect that root proliferation near the soil surface might enhance the weed-suppressive activity of allelochemical exudates released from roots. Plant architectural design for weed suppressive activity should take these traits into consideration along with other proven agronomic traits such as high tillering and yield.

Spatial use by wintering greater white-fronted geese relative to a decade of habitat change in California's Central Valley

USGS Publications Warehouse

Ackerman, Joshua T.; Takekawa, John Y.; Orthmeyer, D.L.; Fleskes, J.P.; Yee, J.L.; Kruse, K.L.

2006-01-01

We investigated the effect of recent habitat changes in California's Central Valley on wintering Pacific greater white-fronted geese (Anser albifrons frontalis) by comparing roost-to-feed distances, distributions, population range sizes, and habitat use during 1987-1990 and 1998-2000. These habitat changes included wetland restoration and agricultural land enhancement due to the 1990 implementation of the Central Valley Joint Venture, increased land area used for rice (Oryza sativa) production, and the practice of flooding, rather than burning, rice straw residues for decomposition because of burning restrictions enacted in 1991. Using radiotelemetry, we tracked 192 female geese and recorded 4,516 locations. Geese traveled shorter distances between roosting and feeding sites during 1998-2000 (24.2 ?? 2.2 km) than during 1987-1990 (32.5 ?? 3.4 km); distance traveled tended to decline throughout winter during both decades and varied among watershed basins. Population range size was smaller during 1998-2000 (3,367 km2) than during 1987-1990 (5,145 km2), despite a 2.2-fold increase in the size of the Pacific Flyway population of white-fronted geese during the same time period. The population range size also tended to increase throughout winter during both decades. Feeding and roosting distributions of geese also differed between decades; geese shifted into basins that had the greatest increases in the amount of area in rice production (i.e., American Basin) and out of other basins (i.e., Delta Basin). The use of rice habitat for roosting (1987-1990: 40%, 1998-2000: 54%) and feeding (1987-1990: 57%, 1998-2000: 72%) increased between decades, whereas use of wetlands declined for roosting (1987-1990: 36%, 1998-2000: 31%) and feeding (1987-1990: 22%, 1998-2000: 12%). Within postharvested rice habitats, geese roosted and fed primarily in burned rice fields during 1987-1990 (roost: 43%, feed: 34%), whereas they used flooded rice fields during 1998-2000 (roost: 78%, feed: 64%). Our results suggest that white-fronted geese have altered their spatial use of California's Central Valley during the past decade in response to changing agricultural practices and the implementation of the Central Valley Joint Venture.

Geochemical associations and availability of cadmium (Cd) in a paddy field system, northwestern Thailand.

PubMed

Kosolsaksakul, Peerapat; Farmer, John G; Oliver, Ian W; Graham, Margaret C

2014-04-01

The Mae Tao watershed, northwest Thailand, has become contaminated with cadmium (Cd) as a result of zinc ore extraction (Padaeng deposit) in the nearby Thanon-Thongchai mountains. Consumption of contaminated rice has led to documented human health impacts. The aim of this study was to elucidate transfer pathways from creek and canal waters to the paddy field soils near Baan Mae Tao Mai village and to determine the relationship between Cd speciation in the soil and uptake by rice plants. Transfer mainly occurred in association with particulate matter during flooding and channel dredging and, in contrast with many other studies, most of the soil Cd was associated with exchangeable and carbonate-bound fractions. Moreover, there was a linear relationship between soil total Cd and rice grain Cd (R(2) = 0.715), but a stronger relationship between both the Tessier-exchangeable soil Cd and the BCR-exchangeable soil Cd and rice grain Cd (R(2) = 0.898 and 0.862, respectively). Copyright © 2014 Elsevier Ltd. All rights reserved.

Diversity and functional traits of culturable microbiome members, including cyanobacteria in the rice phyllosphere.

PubMed

Venkatachalam, S; Ranjan, K; Prasanna, R; Ramakrishnan, B; Thapa, S; Kanchan, A

2016-07-01

The diversity and abundance of culturable microbiome members of the rice phyllosphere was investigated using cv. Pusa Punjab Basmati 1509. Both diversity and species richness of bacteria were significantly higher in plants in pots in a semi-controlled environment than those in fields. Application of fertilisers reduced both diversity and species richness in field-grown plants under a conventional flooded system of rice intensification (SRI) and in dry-seeded rice (DSR) modes. Sequence analyses of 16S rDNA of culturable bacteria, those selected after amplified ribosomal DNA restriction analysis (ARDRA), showed the dominance of α-proteobacteria (35%) and actinobacteria (38%); Pantoea, Exiguobacterium and Bacillus were common among the culturable phyllospheric bacteria. About 34% of 83 culturable bacterial isolates had higher potential (>2 μg·ml(-1) ) for indole acetic acid production in the absence of tryptophan. Interestingly, the phyllosphere bacterial isolates from the pot experiment had significantly higher potential for nitrogen fixation than isolates from the field experiment. Enrichment for cyanobacteria showed both unicellular forms and non-heterocystous filaments under aerobic as well as anaerobic conditions. PCR-DGGE analysis of these showed that aerobic and anaerobic conditions as well as the three modes of cultivation of rice in the field strongly influenced the number and abundance of phylotypes. The adaptability and functional traits of these culturable microbiome members suggest enormous diversity in the phyllosphere, including potential for plant growth promotion, which was also significantly influenced by the different methods of growing rice. © 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

Partitioning of CH4 and CO2 Production Originating from Rice Straw, Soil and Root Organic Carbon in Rice Microcosms

PubMed Central

Yuan, Quan; Pump, Judith; Conrad, Ralf

2012-01-01

Flooded rice fields are an important source of the greenhouse gas CH4. Possible carbon sources for CH4 and CO2 production in rice fields are soil organic matter (SOM), root organic carbon (ROC) and rice straw (RS), but partitioning of the flux between the different carbon sources is difficult. We conducted greenhouse experiments using soil microcosms planted with rice. The soil was amended with and without 13C-labeled RS, using two 13C-labeled RS treatments with equal RS (5 g kg−1 soil) but different δ13C of RS. This procedure allowed to determine the carbon flux from each of the three sources (SOM, ROC, RS) by determining the δ13C of CH4 and CO2 in the different incubations and from the δ13C of RS. Partitioning of carbon flux indicated that the contribution of ROC to CH4 production was 41% at tillering stage, increased with rice growth and was about 60% from the booting stage onwards. The contribution of ROC to CO2 was 43% at tillering stage, increased to around 70% at booting stage and stayed relatively constant afterwards. The contribution of RS was determined to be in a range of 12–24% for CH4 production and 11–31% for CO2 production; while the contribution of SOM was calculated to be 23–35% for CH4 production and 13–26% for CO2 production. The results indicate that ROC was the major source of CH4 though RS application greatly enhanced production and emission of CH4 in rice field soil. Our results also suggest that data of CH4 dissolved in rice field could be used as a proxy for the produced CH4 after tillering stage. PMID:23162678

The flood pulse as the underlying driver of vegetation in the largest wetland and fishery of the Mekong Basin.

PubMed

Arias, Mauricio E; Cochrane, Thomas A; Norton, David; Killeen, Timothy J; Khon, Puthea

2013-11-01

The Tonle Sap is the largest wetland in Southeast Asia and one of the world's most productive inland fisheries. The Mekong River inundates the Tonle Sap every year, shaping a mosaic of natural and agricultural habitats. Ongoing hydropower development, however, will dampen the flood pulse that maintains the Tonle Sap. This study established the current underlying relationship among hydrology, vegetation, and human use. We found that vegetation is strongly influenced by flood duration; however, this relationship was heavily distorted by fire, grazing, and rice cultivation. The expected flood pulse alteration will result in higher water levels during the dry season, permanently inundating existing forests. The reduction of the maximum flood extent will facilitate agricultural expansion into natural habitats. This study is the most comprehensive field survey of the Tonle Sap to date, and it provides fundamental knowledge needed to understand the underlying processes that maintain this important wetland.

Regulating N Application for Rice Yield and Sustainable Eco-Agro Development in the Upper Reaches of Yellow River Basin, China

PubMed Central

Zhang, Aiping; Liu, Ruliang; Gao, Ji; Yang, Shiqi; Chen, Zhe

2014-01-01

High N fertilizer and flooding irrigation applied to rice on anthropogenic-alluvial soil often result in N leaching and low recovery of applied fertilizer N from the rice fields in Ningxia irrigation region in the upper reaches of the Yellow River, which threatens ecological environment, food security, and sustainable agricultural development. This paper reported the regulating N application for rice yield and sustainable Eco-Agro development in the upper reaches of Yellow River basin. The results showed that reducing and postponing N application could maintain crop yields while substantially reducing N leaching losses to the environment and improving the nitrogen use efficiency. Considering the high food production, the minimum environmental threat, and the low labor input, we suggested that regulating N application is an important measure to help sustainable agricultural development in this region. PMID:25045728

Regulating N application for rice yield and sustainable eco-agro development in the upper reaches of Yellow River basin, China.

PubMed

Zhang, Aiping; Liu, Ruliang; Gao, Ji; Yang, Shiqi; Chen, Zhe

2014-01-01

High N fertilizer and flooding irrigation applied to rice on anthropogenic-alluvial soil often result in N leaching and low recovery of applied fertilizer N from the rice fields in Ningxia irrigation region in the upper reaches of the Yellow River, which threatens ecological environment, food security, and sustainable agricultural development. This paper reported the regulating N application for rice yield and sustainable Eco-Agro development in the upper reaches of Yellow River basin. The results showed that reducing and postponing N application could maintain crop yields while substantially reducing N leaching losses to the environment and improving the nitrogen use efficiency. Considering the high food production, the minimum environmental threat, and the low labor input, we suggested that regulating N application is an important measure to help sustainable agricultural development in this region.

Analysis of potential flooding in the education Jatinangor based approach morphology, land cover, and geology

NASA Astrophysics Data System (ADS)

Rifai, Achmad; Hadian, Sapari Dwi; Mufti, Iqbal Jabbari; Fathoni, Azmi Rizqi; Azy, Fikri Noor; Jihadi, Lutfan Harisan

2017-07-01

Jatinangor formerly an agricultural area dominated by rice field. Water in Jatinangor comes from a spring located in north Jatinangor or proximal region of Manglayang mountain to flow to the south and southwest Jatinangor up to Citarum River. Jatinangor plain that was once almost all the rice fields, but now become a land settlement that grew very rapidly since its founding colleges. Flow and puddle were originally be used for agricultural land, but now turned into a disaster risks for humans. The research method using qualitative methods with the weighing factor, scoring, and overlay maps. The cause of the flood is distinguished into two: the first is the natural factors such as the condition of landform, lithology, river flow patterns, and annual rainfall. The second is non-natural factors such as land cover of settlement, irrigation, and land use. The amount of flood risks using probability Gilbert White frequency, magnitude and duration of existing events then correlated with these factors. Based on the results of the study, were divided into 3 zones Jatinangor disaster-prone (high, medium, and safe). High flood zone is located in the South Jatinangor which covers an area Cikeruh Village, Sayang Village, Cipacing village, Mekargalih village, Cintamulya village, west of Jatimukti village, and South Hegarmanah village, has a dominant causative factor is the use of solid land, poor drainage, lithology lacustrine conditions with low permeability, and flat topography. Medium flood zone was located in the central and western regions covering Cibeusi village, Cileles village, south of Cilayung village, Hegarmanah village and Padjadjaran Region, has a dominant causative factor is rather dense land use, lithology breccias and Tuffaceous Sand with moderate permeability, topography is moderately steep. Safe flood zone is located in the east Jatinangor covering Jatiroke village, Cisepur village, east Hegarmanah village, has a dominant factor in the form of a rather steep topography, lithology breccias and lava with moderate permeability, land use rather dense, but there is a dense natural drainage.

Mapping paddy rice planting area in northeastern Asia with Landsat 8 images, phenology-based algorithm and Google Earth Engine

PubMed Central

Dong, Jinwei; Xiao, Xiangming; Menarguez, Michael A.; Zhang, Geli; Qin, Yuanwei; Thau, David; Biradar, Chandrashekhar; Moore, Berrien

2016-01-01

Area and spatial distribution information of paddy rice are important for understanding of food security, water use, greenhouse gas emission, and disease transmission. Due to climatic warming and increasing food demand, paddy rice has been expanding rapidly in high latitude areas in the last decade, particularly in northeastern (NE) Asia. Current knowledge about paddy rice fields in these cold regions is limited. The phenology- and pixel-based paddy rice mapping (PPPM) algorithm, which identifies the flooding signals in the rice transplanting phase, has been effectively applied in tropical areas, but has not been tested at large scale of cold regions yet. Despite the effects from more snow/ice, paddy rice mapping in high latitude areas is assumed to be more encouraging due to less clouds, lower cropping intensity, and more observations from Landsat sidelaps. Moreover, the enhanced temporal and geographic coverage from Landsat 8 provides an opportunity to acquire phenology information and map paddy rice. This study evaluated the potential of Landsat 8 images on annual paddy rice mapping in NE Asia which was dominated by single cropping system, including Japan, North Korea, South Korea, and NE China. The cloud computing approach was used to process all the available Landsat 8 imagery in 2014 (143 path/rows, ~3290 scenes) with the Google Earth Engine (GEE) platform. The results indicated that the Landsat 8, GEE, and improved PPPM algorithm can effectively support the yearly mapping of paddy rice in NE Asia. The resultant paddy rice map has a high accuracy with the producer (user) accuracy of 73% (92%), based on the validation using very high resolution images and intensive field photos. Geographic characteristics of paddy rice distribution were analyzed from aspects of country, elevation, latitude, and climate. The resultant 30-m paddy rice map is expected to provide unprecedented details about the area, spatial distribution, and landscape pattern of paddy rice fields in NE Asia, which will contribute to food security assessment, water resource management, estimation of greenhouse gas emissions, and disease control. PMID:28025586

Mapping paddy rice planting area in northeastern Asia with Landsat 8 images, phenology-based algorithm and Google Earth Engine.

PubMed

Dong, Jinwei; Xiao, Xiangming; Menarguez, Michael A; Zhang, Geli; Qin, Yuanwei; Thau, David; Biradar, Chandrashekhar; Moore, Berrien

2016-11-01

Area and spatial distribution information of paddy rice are important for understanding of food security, water use, greenhouse gas emission, and disease transmission. Due to climatic warming and increasing food demand, paddy rice has been expanding rapidly in high latitude areas in the last decade, particularly in northeastern (NE) Asia. Current knowledge about paddy rice fields in these cold regions is limited. The phenology- and pixel-based paddy rice mapping (PPPM) algorithm, which identifies the flooding signals in the rice transplanting phase, has been effectively applied in tropical areas, but has not been tested at large scale of cold regions yet. Despite the effects from more snow/ice, paddy rice mapping in high latitude areas is assumed to be more encouraging due to less clouds, lower cropping intensity, and more observations from Landsat sidelaps. Moreover, the enhanced temporal and geographic coverage from Landsat 8 provides an opportunity to acquire phenology information and map paddy rice. This study evaluated the potential of Landsat 8 images on annual paddy rice mapping in NE Asia which was dominated by single cropping system, including Japan, North Korea, South Korea, and NE China. The cloud computing approach was used to process all the available Landsat 8 imagery in 2014 (143 path/rows, ~3290 scenes) with the Google Earth Engine (GEE) platform. The results indicated that the Landsat 8, GEE, and improved PPPM algorithm can effectively support the yearly mapping of paddy rice in NE Asia. The resultant paddy rice map has a high accuracy with the producer (user) accuracy of 73% (92%), based on the validation using very high resolution images and intensive field photos. Geographic characteristics of paddy rice distribution were analyzed from aspects of country, elevation, latitude, and climate. The resultant 30-m paddy rice map is expected to provide unprecedented details about the area, spatial distribution, and landscape pattern of paddy rice fields in NE Asia, which will contribute to food security assessment, water resource management, estimation of greenhouse gas emissions, and disease control.

Immobilization remediation of Cd-polluted soil with different water condition.

PubMed

Li, Jianrui; Xu, Yingming

2017-05-15

To demonstrate effects of water management on soil Cd immobilization using palygorskite, the investigation evaluated impacts of palygorskite on uptake of Cd present in soils with different water condition by rice plant. Pot experiment results showed that, pH, available Fe and P in untreated soils were higher in continuous flooding than in traditional irrigation and wetting irrigation, which were reasons for lower soil exchangeable Cd and plant Cd in continuous flooding. In control group (untreated soils), compared to traditional irrigation, continuous flooding reduced brown rice Cd by 37.9%, that in wetting irrigation increased by 31.0%. At palygorskite concentrations of 5 g kg -1 , 10 g kg -1 and 15 g kg -1 , brown rice Cd reduced by 16.7%, 44.4% and 55.6% under continuous flooding, 13.8%, 34.5% and 44.8% under traditional irrigation, 13.1%, 36.8% and 47.3% under wetting irrigation (p < 0.05). At the same palygorskite addition, decreasing amplitude of brown rice Cd was higher in continuous flooding than in traditional irrigation and wetting irrigation. Competition for adsorption sites in root coating between Cd 2+ and Fe 2+ was another factor governing plant Cd. In control group, compared to traditional irrigation, root coating Fe(II) increased by 124.5% and root coating Cd reduced by 17.6% upon continuous flooding (p < 0.05). In conclusion, palygorskite addition combined with continuous flooding was an efficacious technique to stabilize Cd in paddy soils. Copyright © 2017 Elsevier Ltd. All rights reserved.

Control of Adventitious Root Architecture in Rice by Darkness, Light, and Gravity1[OPEN

PubMed Central

2018-01-01

Rice (Oryza sativa) is a semiaquatic plant that is well adapted to partial flooding. Rice stems develop adventitious root (AR) primordia at each node that slowly mature but emerge only when the plant gets flooded, leading to the formation of a whole new secondary root system upon flooding. AR growth is induced by ethylene that accumulates in submerged plant tissues due to its lowered diffusion rate in water. Here, we report that the architecture of the secondary root system in flooded rice plants is controlled not only by altered gas diffusion but also by gravity and light. While ethylene promotes the emergence and growth of ARs, gravity and light determine their gravitropic setpoint angle (i.e. the deviation of growth direction relative to vertical). ARs grow upward at about 120° in the dark and downward at 54° in the light. The upward growth direction is conserved in indica and japonica rice varieties, suggestive of a conserved trait in rice. Experiments with a klinostat and with inverted stem orientation revealed that gravity promotes upward growth by about 10°. Red, far-red, and blue light lead to negative phototropism in a dose-dependent manner, with blue light being most effective, indicating that phytochrome and blue light signaling control AR system architecture. The cpt1 (coleoptile phototropism1) mutant, which lacks one of the phototropin-interacting CPT proteins, shows reduced sensitivity to blue light. Hence, the gravitropic setpoint angle of rice ARs is controlled by genetic and environmental factors that likely balance the need for oxygen supply (upward growth) with avoidance of root desiccation (downward growth). PMID:29242375

Control of Adventitious Root Architecture in Rice by Darkness, Light, and Gravity.

PubMed

Lin, Chen; Sauter, Margret

2018-02-01

Rice ( Oryza sativa ) is a semiaquatic plant that is well adapted to partial flooding. Rice stems develop adventitious root (AR) primordia at each node that slowly mature but emerge only when the plant gets flooded, leading to the formation of a whole new secondary root system upon flooding. AR growth is induced by ethylene that accumulates in submerged plant tissues due to its lowered diffusion rate in water. Here, we report that the architecture of the secondary root system in flooded rice plants is controlled not only by altered gas diffusion but also by gravity and light. While ethylene promotes the emergence and growth of ARs, gravity and light determine their gravitropic setpoint angle (i.e. the deviation of growth direction relative to vertical). ARs grow upward at about 120° in the dark and downward at 54° in the light. The upward growth direction is conserved in indica and japonica rice varieties, suggestive of a conserved trait in rice. Experiments with a klinostat and with inverted stem orientation revealed that gravity promotes upward growth by about 10°. Red, far-red, and blue light lead to negative phototropism in a dose-dependent manner, with blue light being most effective, indicating that phytochrome and blue light signaling control AR system architecture. The cpt1 ( coleoptile phototropism1 ) mutant, which lacks one of the phototropin-interacting CPT proteins, shows reduced sensitivity to blue light. Hence, the gravitropic setpoint angle of rice ARs is controlled by genetic and environmental factors that likely balance the need for oxygen supply (upward growth) with avoidance of root desiccation (downward growth). © 2018 American Society of Plant Biologists. All Rights Reserved.

Economics of weed suppressive rice cultivars in flood- and furrow-irrigated systems

USDA-ARS?s Scientific Manuscript database

Weeds are a major constraint to rice production. In the U.S, weeds in rice are controlled primarily with synthetic herbicides. Intensive herbicide application in rice also has many potential drawbacks, resulting in environmental pollution, human health concerns, and development of weed resistance. B...

Agronomic, physiological and biochemical evaluations of rice under a water-deficit irrigation system

USDA-ARS?s Scientific Manuscript database

The sustainability of conventional flood irrigation management in rice is a concern worldwide considering the uncertain patterns of precipitation and depletion of aquifers used for irrigation. This same concern is shared in USA rice producing areas and, thus, development of rice varieties that can t...

Agriculture and the promotion of insect pests: rice cultivation in river floodplains and malaria vectors in The Gambia.

PubMed

Jarju, Lamin B S; Fillinger, Ulrike; Green, Clare; Louca, Vasilis; Majambere, Silas; Lindsay, Steven W

2009-07-27

Anthropogenic modification of natural habitats can create conditions in which pest species associated with humans can thrive. In order to mitigate for these changes, it is necessary to determine which aspects of human management are associated with the promotion of those pests. Anopheles gambiae, the main Africa malaria vector, often breeds in rice fields. Here the impact of the ancient practice of 'swamp rice' cultivation, on the floodplains of the Gambia River, on the production of anopheline mosquitoes was investigated. Routine surveys were carried out along 500 m transects crossing rice fields from the landward edge of the floodplains to the river during the 2006 rainy season. Aquatic invertebrates were sampled using area samplers and emergence traps and fish sampled using nets. Semi-field experiments were used to investigate whether nutrients used for swamp rice cultivation affected mosquito larval abundance. At the beginning of the rainy season rice is grown on the landward edge of the floodplain; the first area to flood with fresh water and one rich in cattle dung. Later, rice plants are transplanted close to the river, the last area to dry out on the floodplain. Nearly all larval and adult stages of malaria vectors were collected 0-100 m from the landward edge of the floodplains, where immature rice plants were grown. These paddies contained stagnant freshwater with high quantities of cattle faeces. Semi-field studies demonstrated that cattle faeces nearly doubled the number of anopheline larvae compared with untreated water. Swamp rice cultivation creates ideal breeding sites for malaria vectors. However, only those close to the landward edge harboured vectors. These sites were productive since they were large areas of standing freshwater, rich in nutrients, protected from fish, and situated close to human habitation, where egg-laying mosquitoes from the villages had short distances to fly. The traditional practice of 'swamp rice' cultivation uses different bodies of water on the floodplains to cultivate rice during the rainy season. A consequence of this cultivation is the provizion of ideal conditions for malaria vectors to thrive. As the demand for locally-produced rice grows, increased rice farming will generate great numbers of vectors; emphasizing the need to protect local communities against malaria.

Methylmercury cycling, bioaccumulation, and export from agricultural and non-agricultural wetlands in the Yolo Bypass

USGS Publications Warehouse

Windham-Myers, Lisamarie; Marvin-DiPasquale, Mark; Fleck, Jacob; Alpers, Charles N.; Ackerman, Joshua T.; Eagles-Smith, Collin A.; Stricker, Craig; Stephenson, Mark; Feliz, David; Gill, Gary; Bachand, Philip; Brice, Ann; Kulakow, Robin

2010-01-01

d) Identification and testing of potential management approaches for reducing MeHg contamination. In addition, the quantitative results reported here assess the effect of current land use practices in the Yolo Bypass MeHg production, bioaccumulation and export, and provide process-based advice towards achieving current goals of the RWQCB-CVR's Sacramento -- San Joaquin Delta Estuary TMDL for Methyl & Total Mercury (Wood et al., 2010b). Further work is necessary to evaluate biotic exposure in the Yolo Bypass Wildlife Area at higher trophic levels (e.g. birds), to quantify winter hydrologic flux of MeHg to the larger Delta ecosystem, and to evaluate rice straw management options to limit labile carbon supplies to surface sediment during winter months. In summary, agricultural management of rice fields -- specifically the periodic flooding and production of easily degraded organic matter -- promotes the production of MeHg beyond rates seen in naturally vegetated wetlands, whether seasonally or permanently flooded., The exported load from MeHg from these agricultural wetlands may be controlled by limiting hydrologic export from fields to enhance on-site MeHg removal processes, but the tradeoff is that this impoundement increases Me Hg exposure to resident organisms.

Identification and delineation of areas flood hazard using high accuracy of DEM data

NASA Astrophysics Data System (ADS)

Riadi, B.; Barus, B.; Widiatmaka; Yanuar, M. J. P.; Pramudya, B.

2018-05-01

Flood incidents that often occur in Karawang regency need to be mitigated. These expectations exist on technologies that can predict, anticipate and reduce disaster risks. Flood modeling techniques using Digital Elevation Model (DEM) data can be applied in mitigation activities. High accuracy DEM data used in modeling, will result in better flooding flood models. The result of high accuracy DEM data processing will yield information about surface morphology which can be used to identify indication of flood hazard area. The purpose of this study was to identify and describe flood hazard areas by identifying wetland areas using DEM data and Landsat-8 images. TerraSAR-X high-resolution data is used to detect wetlands from landscapes, while land cover is identified by Landsat image data. The Topography Wetness Index (TWI) method is used to detect and identify wetland areas with basic DEM data, while for land cover analysis using Tasseled Cap Transformation (TCT) method. The result of TWI modeling yields information about potential land of flood. Overlay TWI map with land cover map that produces information that in Karawang regency the most vulnerable areas occur flooding in rice fields. The spatial accuracy of the flood hazard area in this study was 87%.

Building Exposure Maps Of Urban Infrastructure And Crop Fields In The Mekong River Basin

NASA Astrophysics Data System (ADS)

Haas, E.; Weichselbaum, J.; Gangkofner, U.; Miltzer, J.; Wali, A.

2013-12-01

In the frame of the Integrated Water Resources Management (IWRM) initiative for the Mekong river basin World Bank is collaborating with the Mekong River Commission and governmental organizations in Cambodia, Lao PDR, Thailand and Vietnam to build national and regional capacities for managing the risks associated with natural disasters, such as floods, flash floods and droughts. Within ‘eoworld', a joint initiative set up by ESA and World Bank to foster the use of Earth Observation (EO) for sustainable development work, a comprehensive database of elements at risk in the Lower Mekong river basin has been established by GeoVille, including urban infrastructure and crops (primarily rice paddies). In the long term, this exposure information shall be fed into an open-source multi- hazard modeling tool for risk assessment along the Mekong River, which then shall be used by national stakeholders as well as insurance and financial institutions for planning, disaster preparedness and emergency management. Earth Observation techniques can provide objective, synoptic and repetitive observations of elements at risk including buildings, infrastructure and crops. Through the fusion of satellite-based with in-situ data from field surveys and local knowledge (e.g. on building materials) features at risk can be characterised and mapped with high accuracy. Earth Observation data utilised comprise bi-weekly Envisat ASAR imagery programmed for a period of 9 months in 2011 to map the development of the rice cultivation area, identify predominant cropping systems (wet-season vs. dry season cultivation), crop cycles (single /double / triple crop per year), date of emergence/harvest and the distinction between rice planted under intensive (SRI) vs. regular rice cultivation techniques. Very High Resolution (VHR) optical data from SPOT, KOMPSAT and QuickBird were used for mapping of buildings and infrastructure, such as building footprints, residential / commercial areas, industrial buildings, main infrastructure, and other public assets. A key input to this work was data collected by the project team in the field with the purpose of scoping information about buildings including material, height (number of stories), construction technique, and floor area. A high resolution satellite-based Digital Elevation Model was additionally generated to provide surface elevations of vegetation and man-made objects with a vertical accuracy of 10 m. By using this methodology thousands of buildings and infrastructure features were mapped, clearly indicating the location and characteristics of the assets. Exposure maps were complemented with the analysis of historical flood and drought events using ERS and Envisat ASAR radar data for historical flood mapping alongside with vegetation index data from SPOT-VEGETATION and NOAA-AVHRR, concerning drought events.

Leaching behavior of nitrogen in a long-term experiment on rice under different N management systems.

PubMed

Luo, Liang-Guo; Itoh, Sumio; Zhang, Qing-Wen; Yang, Shi-Qi; Zhang, Qing-Zhong; Yang, Zheng-Li

2011-06-01

The leaching behavior of nitrogen was studied in single rice paddy production ecosystems in Tsukuba, Japan after 75 years of consistent fertilization regimes (no fertilizer, ammonium sulfate, a combination of composted rice straw with soybean cake, and fresh clover). During the 75-year period, management was unchanged with respect to rice planting density, irrigation, and net N fertilization for each field to which an N-source was added. Percolation water was collected, from May 2001 to April 2002, using porous suction cups installed in the fields at depths of 15, 40, and 60 cm. All water samples were taken to the laboratory for the measurement of both NH(4) ( + )-N and NO(3) ( - )-N concentrations using a continuous-flow nitrogen analyzer. The result indicated that there were significant differences in N leaching losses between treatments during the rice growing season. Total N leaching was significantly lower with the application of composted rice straw plus soybean cake (0.58 kg N ha( - 1)) than with ammonium sulfate (2.41 kg N ha( - 1)), which resulted in N leaching at a similar level to that with the fresh clover treatment (no significant difference). The majority of this N leaching was not due to NO(3) ( - )-N loss, but to that of NH(4) ( + )-N. The mean N leaching for all fertilizer treatments during the entire rice growing season was 1.58 kg N ha( - 1). Composted rice straw plus soybean cake produced leaching losses which were 65-75% lower than those with the application of fresh clover and ammonium sulfate. N accumulation resulting from nitrification in the fallow season could be a key source of nitrate-N leaching when fields become re-flooded before rice transplanting in the following year; particular attention should be paid to this phenomenon.

Mapping rice extent map with crop intensity in south China through integration of optical and microwave images based on google earth engine

NASA Astrophysics Data System (ADS)

Zhang, X.; Wu, B.; Zhang, M.; Zeng, H.

2017-12-01

Rice is one of the main staple foods in East Asia and Southeast Asia, which has occupied more than half of the world's population with 11% of cultivated land. Study on rice can provide direct or indirect information on food security and water source management. Remote sensing has proven to be the most effective method to monitoring the cropland in large scale by using temporary and spectral information. There are two main kinds of satellite have been used to mapping rice including microwave and optical. Rice, as the main crop of paddy fields, the main feature different from other crops is flooding phenomenon at planning stage (Figure 1). Microwave satellites can penetrate through clouds and efficiency on monitoring flooding phenomenon. Meanwhile, the vegetation index based on optical satellite can well distinguish rice from other vegetation. Google Earth Engine is a cloud-based platform that makes it easy to access high-performance computing resources for processing very large geospatial datasets. Google has collected large number of remote sensing satellite data around the world, which providing researchers with the possibility of doing application by using multi-source remote sensing data in a large area. In this work, we map rice planting area in south China through integration of Landsat-8 OLI, Sentienl-2, and Sentinel-1 Synthetic Aperture Radar (SAR) images. The flowchart is shown in figure 2. First, a threshold method the VH polarized backscatter from SAR sensor and vegetation index including normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) from optical sensor were used the classify the rice extent map. The forest and water surface extent map provided by earth engine were used to mask forest and water. To overcome the problem of the "salt and pepper effect" by Pixel-based classification when the spatial resolution increased, we segment the optical image and use the pixel- based classification results to merge the object-oriented segmentation data, and finally get the rice extent map. At last, by using the time series analysis, the peak count was obtained for each rice area to ensure the crop intensity. In this work, the rice ground point from a GVG crowdsourcing smartphone and rice area statistical results from National Bureau of Statistics were used to validate and evaluate our result.

Elevated ground-level O(3) changes the diversity of anoxygenic purple phototrophic bacteria in paddy field.

PubMed

Feng, Youzhi; Lin, Xiangui; Yu, Yongchang; Zhu, Jianguo

2011-11-01

The knowledge of the impact of elevated ground-level O(3) below ground the agro-ecosystem is limited. A field experiment in China Ozone Free-Air Concentration Enrichment (FACE-O(3)) facility on a rice-wheat rotation system was carried out to investigate responses of anoxygenic phototrophic purple bacteria (AnPPB) to elevated ground-level O(3). AnPPB community structures and sizes in paddy soil were monitored by molecular approaches including PCR-DGGE and real-time quantitative PCR based upon the pufM gene on three typical rice growth stages. Repetitive sequence-based PCR (rep-PCR) in combination with culture-reliant method was conducted to reveal changes in genotypic diversity. Elevated ground-level O(3) statistically reduce AnPPB abundance and percentage in total bacterial community in flooded rice soil via decreasing their genotypic diversity and metabolic versatility. Concomitantly, their community composition changed after rice anthesis stage under elevated ground-level O(3). Our results from AnPPB potential responses imply that continuously elevated ground-level O(3) in the future would eventually harm the health of paddy ecosystem through negative effect on soil microorganisms.

Emissions Of Greenhouse Gases From Rice Agriculture

DOE Office of Scientific and Technical Information (OSTI.GOV)

M. Aslam K. Khalil

This project produced detailed data on the processes that affect methane and nitrous oxide emissions from rice agriculture and their inter-relationships. It defines the shifting roles and potential future of these gases in causing global warming and the benefits and tradeoffs of reducing emissions. The major results include: 1). Mechanisms and Processes Leading to Methane Emissions are Delineated. Our experiments have tested the standard model of methane emissions from rice fields and found new results on the processes that control the flux. A mathematical mass balance model was used to unravel the production, oxidation and transport of methane from rice.more » The results suggested that when large amounts of organic matter are applied, the additional flux that is observed is due to both greater production and reduced oxidation of methane. 2). Methane Emissions From China Have Been Decreasing Over the Last Two Decades. We have calculated that methane emissions from rice fields have been falling in recent decades. This decrease is particularly large in China. While some of this is due to reduced area of rice agriculture, the bigger effect is from the reduction in the emission factor which is the annual amount of methane emitted per hectare of rice. The two most important changes that cause this decreasing emission from China are the reduced use of organic amendments which have been replaced by commercial nitrogen fertilizers, and the increased practice of intermittent flooding as greater demands are placed on water resources. 3). Global Methane Emissions Have Been Constant For More Than 20 Years. While the concentrations of methane in the atmosphere have been leveling off in recent years, our studies show that this is caused by a near constant total global source of methane for the last 20 years or more. This is probably because as some anthropogenic sources have increased, others, such as the rice agriculture source, have fallen. Changes in natural emissions appear small. 4). Nitrous Oxide Emissions From Rice Fields Increase as Methane Emissions Drop. Inundated conditions favor anaerobic methane production with high emission rates and de-nitrification resulting in modest nitrous oxide emissions. Under drier conditions such as intermittent flooding, methane emissions fall and nitrous oxide emissions increase. Increased nitrogen fertilizer use increases nitrous oxide emissions and is usually accompanied by reduced organic matter applications which decreases methane emissions. These mechanisms cause a generally inverse relationship between methane and nitrous oxide emissions. Reduction of methane from rice agriculture to control global warming comes with tradeoffs with increased nitrous oxide emissions. 5). High Spatial Resolution Maps of Emissions Produced. Maps of methane and nitrous oxide emissions at a resolution of 5 min × 5 min have been produced based on the composite results of this research. These maps are necessary for both scientific and policy uses.« less

Transformation of marine sediment to paddy soil: Primary marine, lacustrine, and land plant lipids

NASA Astrophysics Data System (ADS)

Mueller-Niggemann, Cornelia; Cao, Zhihong; Schwark, Lorenz

2010-05-01

More than fifty percent of the world's population feeds on rice. The continuous population increase and urban sprawl leads to an ever-increasing demand for new rice cultivation area, in particular China. For centuries suitable coastal areas in China have been exploited for land reclamation, i.e. conversion of coastal marine and lacustrine marshlands into rice paddy fields. Flooded rice paddies are considered one of the major biogenic sources of methane into the atmospheric. Methane is thought to be about 30 times more efficient as greenhouse gas, when compared to carbon dioxide. Overall, rice fields are assumed to contribute app. 10-25% to global CH4 production. It is thus paramount importance to study the effects of increasing rice cultivation and land reclamation in China. For global carbon cycle investigation, it is crucial whether paddy soils, due to their large extent and higher carbon turnover, serve as carbon (CO2) sinks or sources. Here we present results from a chronosequence study of paddy soils with different and well known starting dates of cultivation, in the Zhejiang province (Yangtze River delta) by land reclamation through the building of protective dikes over the past 2000 years. Two end members of natural sediments subjected to land reclamation, a marine tidal mudflat in the Yangtze delta and a coastal lake, represent the substrate on which the paddy soil evolution started. Dike systems were constructed 2000, 1000, 700, 300, 100, and 50 years before present. We are thus able to follow the evolution of rice paddy soils developed on marine sediments using eight well defined tie-points. This chronosequence is then used for assessing the relative proportion of primary marine or lacustrine organic matter preserved in present day soils and to identify the amount and composition of organic matter added since cultivation started. Paddy soil management introduces rice plants debris and exudates as well as rice-associated microbial biomass (covered in a separate contribution) into soils. Management practises involve burning of rice straw on fields, thus adding biomass combustion residues that either may be particularly stable (e.g. PAH) or highly reactive (alkenes resulting from dehydration of alcohols). Bulk parameters reveal that the five field replicates taken at each site are highly compatible, with standard deviations usually between 0.1 to 5.0 % depending on site and/or parameter. This is better than expected and proves that the samples are representative for each cropping site. The n- and isoalkane composition also proved to be very systematic and reproducible. The marine end-member shows a broad n-alkane envelope from nC13 to nC40, with a maximum of nC31 and low abundance of nC17 and nC32+ alkanes. The lacustrine site also reveals a broad n-alkane envelope and a maximum of nC31 but shows higher relative abundance of nC17, nC23 and nC25 alkanes in addition to a C20-HBI. These biomarkers for aquatic macrophytes and diatoms were also found in minor proportions in paddy soils due to flooding with lacustrine water. Paddy n-alkane patterns were dominated by nC29 which systematically increased in abundance for older paddy soils. Paddy soil n-alkane patterns from the chronosequence are similar and related to the marine pattern. Combustion of rice straw on the field is a common management practise for nutrient return to soils. A rice straw ash sample collected in the field revealed a series of nC13 to nC37 n-alkane/alkene doublets with low odd over even predominance. As no alkenes were found in paddy soils, very fast diagenetic conversion of reactive alkenes must occur. Soil organic matter and aliphatics content increased six fold over a cultivation time of 2000 years, identifying paddies as CO2 sinks in the global carbon cycle.

Simultaneous effect of dissolved organic carbon, surfactant, and organic acid on the desorption of pesticides investigated by response surface methodology.

PubMed

Trinh, Ha Thu; Duong, Hanh Thi; Ta, Thao Thi; Van Cao, Hoang; Strobel, Bjarne W; Le, Giang Truong

2017-08-01

Desorption of pesticides (fenobucarb, endosulfan, and dichlorodiphenyltrichloroethane (DDT)) from soil to aqueous solution with the simultaneous presence of dissolved organic carbon (DOC), sodium dodecyl sulfate (SDS), and sodium oxalate (Oxa) was investigated in batch test by applying a full factorial design and the Box-Behnken response surface methodology (RSM). Five concentration levels of DOC (8 to 92 mg L -1 ), SDS (0 to 6.4 critical micelle concentration (CMC)), and Oxa (0 to 0.15 M) were used for the experiments with a rice field topsoil. The results of RSM analysis and analysis of variance (ANOVA) have shown that the experimental data could be well described by quadratic regression equations with determination coefficients (R 2 ) of 0.990, 0.976, and 0.984 for desorption of fenobucarb, endosulfan, and DDT, respectively. The individual effects and interaction of DOC, SDS, and Oxa were evaluated through quadratic regression equations. When the aqueous solution includes 50 mg L -1 DOC, 3.75 CMC SDS, and 0.1 M Oxa, the maximum desorption concentrations of fenobucarb, endosulfan, and DDT were 96, 80, and 75 μg L -1 , respectively. The lowest concentration of SDS, DOC, and Oxa caused the minimum desorption. This point at conditions of concern for flooding water is high content of organic compounds causing potentially high contamination by desorption, and the remarkably lower desorption at organic matter-free conditions. The suspended organic matter is one of the common characteristics of flooding and irrigation water in rice fields, and surfactants from pollution increase the problem with desorption of legacy pesticides in the rice fields.

Rice evapotranspiration at the field and canopy scales under water-saving irrigation

NASA Astrophysics Data System (ADS)

Liu, Xiaoyin; Xu, Junzeng; Yang, Shihong; Zhang, Jiangang

2018-04-01

Evapotranspiration (ET) is an important process of land surface water and thermal cycling, with large temporal and spatial variability. To reveal the effect of water-saving irrigation (WSI) on rice ET at different spatial scales and understand the cross spatial scale difference, rice ET under WSI condition at canopy (ETCML) and field scale (ETEC) were measured simultaneously by mini-lysimeter and eddy covariance (EC) in the rice season of 2014. To overcome the shortage of energy balance deficit by EC system, and evaluate the influence of energy balance closure degree on ETEC, ETEC was corrected as {ET}_{EC}^{*} by energy balance closure correction according to the evaporative fraction. Seasonal average daily ETEC, {ET}_{EC}^{*} and ETCML of rice under WSI practice were estimated as 3.12, 4.03 and 4.35 mm day-1, smaller than the values reported in flooded paddy fields. Daily ETEC, {ET}_{EC}^{*} and ETCML varied in a similar trends and reached the maximum in late tillering, then decreased along with the crop growth in late season. The value of ETEC was much lower than ETCML, and was frequently 1-2 h lagged behind ETCML. It indicated that the energy balance deficit resulted in underestimation of crop ET by EC system. The corrected value of {ET}_{EC}^{*} matched ETCML much better than ETEC, with a smaller RMSE (0.086 mm h-1) and higher R 2 (0.843) and IOA (0.961). The time lapse between {ET}_{EC}^{*} and ETCML was mostly shortened to less than 0.5 h. The multiple stepwise regression analysis indicated that net radiation ( R n) is the dominant factor for rice ET, and soil moisture ( θ) is another significant factor ( p < 0.01) in WSI rice fields. The difference between ETCML and {ET}_{EC}^{*} ({ET}_{CML} - {ET}_{EC}^{*}) were significantly ( p < 0.05) correlated with R n, air temperature ( T a), and air vapor pressure deficit ( D), and its partial correlation coefficients to R n and T a were slightly greater than D. Thus, R n, T a and D are important variables for understanding the spatial scale effect of rice ET in WSI fields, and for its cross scale conversion.

Influence of water management on the active root-associated microbiota involved in arsenic, iron, and sulfur cycles in rice paddies.

PubMed

Zecchin, Sarah; Corsini, Anna; Martin, Maria; Cavalca, Lucia

2017-09-01

In recent years, the role of microorganisms inhabiting rice rhizosphere in promoting arsenic contamination has emerged. However, little is known concerning the species and metabolic properties involved in this phenomenon. In this study, the influence of water management on the rhizosphere microbiota in relation to arsenic dissolution in soil solution was tested. Rice plants were cultivated in macrocosms under different water regimes: continuous flooding, continuous flooding with a 2-week period drainage before flowering, and dry soil watered every 10 days. The active bacterial communities in rhizosphere soil and in rhizoplane were characterized by 16S rRNA pyrosequencing. An in-depth analysis of microbial taxa with direct or indirect effects on arsenic speciation was performed and related contribution was evaluated. Continuous flooding promoted high diversity in the rhizosphere, with the plant strongly determining species richness and evenness. On the contrary, under watering the communities were uniform, with little differences between rhizosphere soil and rhizoplane. Arsenic-releasing and arsenite-methylating bacteria were selected by continuous flooding, where they represented 8% of the total. On the contrary, bacteria decreasing arsenic solubility were more abundant under watering, with relative abundance of 10%. These values reflected arsenic concentrations in soil solution: 135 μg L -1 and negligible in continuous flooding and under watering, respectively. When short-term drainage was applied before flowering, intermediate conditions were achieved. This evidence strongly indicates an active role of the rhizosphere microbiota in driving arsenic biogeochemistry in rice paddies, influenced by water management, explaining amounts and speciation of arsenic often found in rice grains.

Introduction to the Special Issue: Electrons, water and rice fields: plant response and adaptation to flooding and submergence stress

PubMed Central

Jackson, Michael B.; Ismail, Abdelbagi M.

2015-01-01

Flooding and submergence impose widespread and unpredictable environmental stresses on plants and depress the yield of most food crops. The problem is increasing, as is the need for greater food production from an expanding human population. The incompatibility of these opposing trends creates an urgent need to improve crop resilience to flooding in its multifarious forms. This Special Issue brings together research findings from diverse plant species to address the challenge of enhancing adaptation to flooding in major crops and learning from tactics of wetland plants. Here we provide an overview of the articles, with attempts to summarize how recent research results are being used to produce varieties of crop plants with greater flooding tolerance, notably in rice. The progress is considerable and based firmly on molecular and physiological research findings. The article also sets out how next-generation improvements in crop tolerance are likely to be achieved and highlights some of the new research that is guiding the development of improved varieties. The potential for non-model species from the indigenous riparian flora to uncover and explain novel adaptive mechanisms of flooding tolerance that may be introduced into crop species is also explored. The article begins by considering how, despite the essential role of water in sustaining plant life, floodwater can threaten its existence unless appropriate adaptations are present. Central to resolving the contradiction is the distinction between the essential role of cellular water as the source of electrons and protons used to build and operate the plant after combining with CO2 and O2 and the damaging role of extracellular water that, in excess, interferes with the union of these gases with photosynthetic or respiratory electrons and protons. PMID:26174144

A rhamnose-deficient lipopolysaccharide mutant of Rhizobium sp. IRBG74 is defective in root colonization and beneficial interactions with its flooding-tolerant hosts Sesbania cannabina and wetland rice.

PubMed

Mitra, Shubhajit; Mukherjee, Arijit; Wiley-Kalil, Audrey; Das, Seema; Owen, Heather; Reddy, Pallavolu M; Ané, Jean-Michel; James, Euan K; Gyaneshwar, Prasad

2016-10-01

Rhizobium sp. IRBG74 develops a classical nitrogen-fixing symbiosis with the aquatic legume Sesbania cannabina (Retz.). It also promotes the growth of wetland rice (Oryza sativa L.), but little is known about the rhizobial determinants important for these interactions. In this study, we analyzed the colonization of S. cannabina and rice using a strain of Rhizobium sp. IRBG74 dually marked with β-glucuronidase and the green fluorescent protein. This bacterium colonized S. cannabina by crack entry and through root hair infection under flooded and non-flooded conditions, respectively. Rhizobium sp. IRBG74 colonized the surfaces of wetland rice roots, but also entered them at the base of lateral roots. It became endophytically established within intercellular spaces in the rice cortex, and intracellularly within epidermal and hypodermal cells. A mutant of Rhizobium sp. IRBG74 altered in the synthesis of the rhamnose-containing O-antigen exhibited significant defects, not only in nodulation and symbiotic nitrogen fixation with S. cannabina, but also in rice colonization and plant growth promotion. Supplementation with purified lipopolysaccharides from the wild-type strain, but not from the mutant, restored the beneficial colonization of rice roots, but not fully effective nodulation of S. cannabina Commonalities and differences in the rhizobial colonization of the roots of wetland legume and rice hosts are discussed. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Soil Texture and Cultivar Effects on Rice (Oryza sativa, L.) Grain Yield, Yield Components and Water Productivity in Three Water Regimes.

PubMed

Dou, Fugen; Soriano, Junel; Tabien, Rodante E; Chen, Kun

2016-01-01

The objective of this study was to determine the effects of water regime/soil condition (continuous flooding, saturated, and aerobic), cultivar ('Cocodrie' and 'Rondo'), and soil texture (clay and sandy loam) on rice grain yield, yield components and water productivity using a greenhouse trial. Rice grain yield was significantly affected by soil texture and the interaction between water regime and cultivar. Significantly higher yield was obtained in continuous flooding than in aerobic and saturated soil conditions but the latter treatments were comparable to each other. For Rondo, its grain yield has decreased with soil water regimes in the order of continuous flooding, saturated and aerobic treatments. The rice grain yield in clay soil was 46% higher than in sandy loam soil averaged across cultivar and water regime. Compared to aerobic condition, saturated and continuous flooding treatments had greater panicle numbers. In addition, panicle number in clay soil was 25% higher than in sandy loam soil. The spikelet number of Cocodrie was 29% greater than that of Rondo, indicating that rice cultivar had greater effect on spikelet number than soil type and water management. Water productivity was significantly affected by the interaction of water regime and cultivar. Compared to sandy loam soil, clay soil was 25% higher in water productivity. Our results indicated that cultivar selection and soil texture are important factors in deciding what water management option to practice.

Net global warming potential and greenhouse gas intensity as affected by different water management strategies in Chinese double rice-cropping systems.

PubMed

Wu, Xiaohong; Wang, Wei; Xie, Xiaoli; Yin, Chunmei; Hou, Haijun; Yan, Wende; Wang, Guangjun

2018-01-15

This study provides a complete account of global warming potential (GWP) and greenhouse gas intensity (GHGI) in relation to a long-term water management experiment in Chinese double-rice cropping systems. The three strategies of water management comprised continuous (year-round) flooding (CF), flooding during the rice season but with drainage during the midseason and harvest time (F-D-F), and irrigation only for flooding during transplanting and the tillering stage (F-RF). The CH 4 and N 2 O fluxes were measured with the static chamber method. Soil organic carbon (SOC) sequestration rates were estimated based on the changes in the carbon stocks during 1998-2014. Longer periods of soil flooding led to increased CH 4 emissions, reduced N 2 O emissions, and enhanced SOC sequestration. The net GWPs were 22,497, 8,895, and 1,646 kg CO 2 -equivalent ha -1 yr -1 for the CF, F-D-F, and F-RF, respectively. The annual rice grain yields were comparable between the F-D-F and CF, but were reduced significantly (by 13%) in the F-RF. The GHGIs were 2.07, 0.87, and 0.18 kg CO 2 -equivalent kg -1 grain yr -1 for the CF, F-D-F, and F-RF, respectively. These results suggest that F-D-F could be used to maintain the grain yields and simultaneously mitigate the climatic impact of double rice-cropping systems.

Greenhouse gas emissions, irrigation water use, and arsenic concentrations; a common thread in rice water management

USDA-ARS?s Scientific Manuscript database

Rice has historically been grown as a flooded crop in the United States. As competition for water resources has grown, there is interest in reducing water use in rice production so as to maintain a viable and sustainable rice industry into the future. An irrigation study was established in 2011 at ...

Remote Sensing-Based Quantification of the Impact of Flash Flooding on the Rice Production: A Case Study over Northeastern Bangladesh

PubMed Central

Rahaman, Khan Rubayet; Kok, Aaron; Hassan, Quazi K.

2017-01-01

The northeastern region of Bangladesh often experiences flash flooding during the pre-harvesting period of the boro rice crop, which is the major cereal crop in the country. In this study, our objective was to delineate the impact of the 2017 flash flood (that initiated on 27 March 2017) on boro rice using multi-temporal Landsat-8 OLI and MODIS data. Initially, we opted to use Landsat-8 OLI data for mapping the damages; however, during and after the flooding event the acquisition of cloud free images were challenging. Thus, we used this data to map the cultivated boro rice acreage considering the planting to mature stages of the crop. Also, in order to map the extent of the damaged boro area, we utilized MODIS data as their 16-day composites provided cloud free information. Our results indicated that both the cultivated and damaged boro area estimates based on satellite data had strong relationships while compared to the ground-based estimates (i.e., r2 values approximately 0.92 for both cases, and RMSE of 18,374 and 9380 ha for cultivated and damaged areas, respectively). Finally, we believe that our study would be critical for planning and ensuring food security for the country. PMID:29036896

Remote Sensing-Based Quantification of the Impact of Flash Flooding on the Rice Production: A Case Study over Northeastern Bangladesh.

PubMed

Ahmed, M Razu; Rahaman, Khan Rubayet; Kok, Aaron; Hassan, Quazi K

2017-10-14

The northeastern region of Bangladesh often experiences flash flooding during the pre-harvesting period of the boro rice crop, which is the major cereal crop in the country. In this study, our objective was to delineate the impact of the 2017 flash flood (that initiated on 27 March 2017) on boro rice using multi-temporal Landsat-8 OLI and MODIS data. Initially, we opted to use Landsat-8 OLI data for mapping the damages; however, during and after the flooding event the acquisition of cloud free images were challenging. Thus, we used this data to map the cultivated boro rice acreage considering the planting to mature stages of the crop. Also, in order to map the extent of the damaged boro area, we utilized MODIS data as their 16-day composites provided cloud free information. Our results indicated that both the cultivated and damaged boro area estimates based on satellite data had strong relationships while compared to the ground-based estimates (i.e., r ² values approximately 0.92 for both cases, and RMSE of 18,374 and 9380 ha for cultivated and damaged areas, respectively). Finally, we believe that our study would be critical for planning and ensuring food security for the country.

[Introduction of upland rice cultivars to eastern Keerqin sandy land and their biological characteristics].

PubMed

Zeng, Dehui; Zhang, Chunxing; Wang, Guirong; Fan, Zhiping

2004-10-01

Developing water-saving rice cultivation is one important strategy for food security in China. This paper reported the experimental results of introducing six upland rice cultivars to eastern Keerqin sandy land. The field experiment results showed that under the condition of 60% water-saving, the yield of cultivars XH 95-13 and XH 95-13-6 was 10.2% and 5.5% higher than the control, respectively, while other four cultivars decreased by 6.7%-18.6%. Economically, all the cultivars except JP 121 had a higher income than the control, and the profitability of cultivars XH 95-13 and XH 95-13-6 reached 24.0% and 19.3%, respectively. The water productivity of all the six cultivars was over 0.566 kg x m(-3), increased by 59.89%-116.38%. Pot experiment showed that 12.1%-16.3% of soil moisture in 0-15 cm layer was beneficial to the growth of upland rice. In eastern Keerqin sandy land, effective tillers occurred before July 18. In brief, upland rice production could be extensively applicable in eastern Keerqin sandy land to gradually alternate the traditional lowland rice cultivation with continuous flooding, and save much underground water.

Determination of the Water Potential Threshold at Which Rice Growth Is Impacted.

PubMed

Dos Santos, Caio Luiz; de Borja Reis, André Froes; Mazzafera, Paulo; Favarin, José Laércio

2018-06-22

Rice feeds 50% of the world’s population. Flooding is the most common irrigation system used for growing rice, a practice responsible for a large amount of water loss. Climate changes may affect water availability in irrigated agriculture, and it will be necessary to develop more sustainable irrigation practices. The aim of this work was to determine, in controlled conditions, the threshold when water potential begins to decrease plant growth. Two independent greenhouse experiments were conducted during middle summer and fall, in order to validate the results for high and low evapotranspiration conditions. Rice plants were grown in hydroponics and the water potential was adjusted with polyethylene glycol 6000, varying from −0.04 MPa (control) to −0.19 MPa. Leaf water potential, water use efficiency, leaf area, and root and shoot biomass were evaluated. All assayed parameters decreased as the water potential was decreased. The water potential threshold which starts to negatively affect rice growth was between −0.046 and −0.056 MPa, which are values close to those observed in the field in previous research. The definition of a critical value may help to improve water management in rice cultivation and to maintain productivity.

Microbial-driven arsenic cycling in rice paddies amended with monosodium methanearsonate

USDA-ARS?s Scientific Manuscript database

Rice consumption is the second largest contributor to human arsenic exposure worldwide and is linked to many serious diseases. Because rice is uniquely adapted for agricultural production under flooded soils, arsenic species solubilized in such environments can be effectively transported into plant ...

Water management, rice varieties and mycorrhizal inoculation influence arsenic concentration and speciation in rice grains.

PubMed

Zhang, Xin; Wu, Songlin; Ren, Baihui; Chen, Baodong

2016-05-01

A pot experiment was carried out to investigate the effects of water management and mycorrhizal inoculation on arsenic (As) uptake by two rice varieties, the As-resistant BRRI dhan 47 (B47) and As-sensitive BRRI dhan 29 (B29). Grain As concentration of B47 plants was significantly lower than that of B29, and grain As concentration of B47 was higher under flooding conditions than that under aerobic conditions. In general, mycorrhizal inoculation (Rhizophagus irregularis) had no significant effect on grain As concentrations, but decreased the proportion of inorganic arsenic (iAs) in grains of B47. The proportion of dimethylarsinic acid (DMA) in the total grain As was dramatically higher under flooding conditions. Results demonstrate that rice variety selection and appropriate water management along with mycorrhizal inoculation could be practical countermeasures to As accumulation and toxicity in rice grains, thus reducing health risks of As exposure in rice diets.

Co-development of climate smart flooded rice farming systems

NASA Astrophysics Data System (ADS)

de Neergaard, Andreas; Stoumann Jensen, Lars; Ly, Proyuth; Pandey, Arjun; Duong Vu, Quynh; Tariq, Azeem; Islam, Syed; van Groenigen, Jan Willem; Sander, Bjoern Ole; de Tourdonnet, Stephane; Van Mai, Trinh; Wassmann, Reiner

2017-04-01

Mid-season drainage in flooded rice is known to reduce CH4 emission, while effects on N2O emission are more variable. Banning of crop-residue burning, and growing markets for organically fertilized rice, are resulting in systems with larger reactive C input, and potentially larger methane emissions. Tight farming systems with 2 or 3 annual crops are effective in mitigating emissions, in that the land sparing value is high, but put serious constraints on mitigation options under increased C input scenarios. In a series of field (Cambodia, Philippines and Vietnam) and greenhouse experiments, we investigated the effect of a variety of organic amendments and wetting and drying cycles on yield and GHG emissions. Specifically we have tested the effect of inserting very early, or even-pre-planting drainage, as a means to accelerate turnover of straw or other C sources, and reduce methane emission later in the season. Overall, our results showed that drying periods had minimal impact on yields, while reducing overall GHG emission. Methane emission was strongly controlled by C availability in the substrate (on equal total C-input basis), increasing in the order: biochar-composts-animal manure-fresh material. Nitrous oxide emissions generally increased with draining cycles, but did not lead to overall increase in GHG emissions as its contribution was balanced by lowered CH4 emissions. Growth chamber experiments showed that methane emission was significantly reduced for extended periods after re-flooding, hence the idea of early drainage was developed. Meanwhile, Cambodian farmers expressed concerns over re-supply of water after drainage. In response to that, we tested if early-season drainage could replace mid-season drainage. With addition of labile carbon substrates (straw) duration of early season drainage was more important for reducing GHG emissions, than duration of mid-season drainage, and had the highest potential for total emission reduction. In a farmers-field trial in Vietnam, pre-planting and early season drainage was tested in spring and summer rice, under individual and community water management regimes, and at 2 straw application levels. Pre-season drainage was difficult for farmers to implement, due to the short duration of fallow between cropping seasons. Early season drainage was most effective in lowering methane emissions at both straw application levels. Unsurprisingly, the well-managed drainage control (community system) was significantly more effective in mitigating emissions, than the individually water management. Surveys among farming communities in Philippines, subject to agricultural campaigns on alternate-wetting-and-drying showed higher adoption among farmers who actively pumped water to their fields, compared to gravity-fed water supply, due to the direct savings experienced by farmers pumping water. Several other factors positively influenced adoption of mitigation techniques, including education level, access to extension services, wealth and farm size, and age of farmer (negatively correlated to adoption rate). In conclusion, drainage periods are even more important to mitigate emissions when including organic manures or residues in flooded rice, and early-season drainage should be further explored as a more safe and convenient option for smallholders. Participatory development of climate smart prototypes will be essential, and a model for such is presented.

Effects of furrow irrigation on the growth, production, and water use efficiency of direct sowing rice.

PubMed

He, Chunlin

2010-08-03

Rice farming is the major crop production in Asia and is predicted to increase significantly in the near future in order to meet the demands for the increasing human population. Traditional irrigation methods used in rice farming often result in great water loss. New water-saving methods are urgently needed to reduce water consumption. Three field and pot experiments were conducted to evaluate the furrow irrigation (FI) system to improve water use efficiency (WUE) and production of direct sowing rice in southern China. Compared to the conventional irrigation (CI) system (continuous flooding irrigation), for every square hectometer of rice field, the FI system reduced water use by 3130 m3, or 48.1%, and increased grain production by 13.9% for an early cultivar. For a late cultivar, the FI system reduced water use by 2655 m3, or 40.6%, and an increase of grain production by 12.1%. The improved WUE in the FI system is attributed to (1) a significant reduction of irrigation rate, seepage, evaporation, and evapotranspiration; (2) a significant reduction in the reduced materials, such as ferrous ion (Fe2+), and therefore an increase in the vitality of the root system, evident by the increases in the number of white roots by 32.62%, and decreases in the number of black roots by 20.04% and yellow roots by 12.58%; the use of the FI system may also reduce humidity of the rice field and enhance gas transport in the soil and light penetration, which led to reduced rice diseases and increased leaf vitality; and (3) increases in tiller and effective spikes by 11.53% and the weight per thousand grains by 1.0 g. These findings suggest that the shallow FI system is a promising means for rice farming in areas with increasing water shortages.

A genetic approach to producing rice using less irrigation water

USDA-ARS?s Scientific Manuscript database

Research has shown that conventional rice production using the permanent flooded system can also result in high methane emissions, increased grain arsenic accumulation, and extensive demand on irrigation resources. Although rice is a staple grain for feeding half the world, there has been increasin...

75 FR 55515 - Proposed Flood Elevation Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-13

... Road. Township of Hollenback, Township of Rice, Township of Wright. Approximately 535 feet None +1526 upstream of Dale Drive. Black Creek Approximately 910 feet None +1461 Borough of West upstream of Hazleton.... Township of Rice Maps are available for inspection at the Rice Township Building, 3000 Church Road...

Systems Dynamics Modelling Identifies (Un)Sustainable Rice Cultivation Strategies for the Mekong Delta Under Upstream Hydropower Development

NASA Astrophysics Data System (ADS)

Darby, S. E.; Chapman, A.; Hackney, C. R.; Leyland, J.; Parsons, D. R.; Aalto, R. E.; Nicholas, A. P.; Best, J.

2016-12-01

The Vietnamese Mekong delta is one of the world's largest rice producing regions, but it is facing a major sustainability challenge. The delta is being `drowned' by rising relative sea-levels, a situation that is being exacerbated by a reduction in the supply of rivers sediments due to a combination of climate change and sediment trapping linked to the construction of large hydropower dams in upstream countries. Poverty is prevalent and farmers face many challenges, such as declining productivity, income insecurity and debt; they are therefore reliant on natural ecosystem services, notably soil nutrient replenishment by sediment deposition during floods, to minimise dependence on chemical fertilisers. Meanwhile, the drive to intensify rice production (a key national policy goal that has underpinned the region's recent economic development) has been achieved by replacing the traditional use of `low' (0-2m in height) dyke networks with `high' (>3.5m) dyke networks. Since rice production takes place within these dyke rings, this has enabled a switch from traditional cultivation techniques (double cropping within low dyke rings) to a new system of triple cropping (in which an extra crop can be grown due to the exclusion of flood waters during the monsoon season) within the high dykes. This involves trading off immediate benefits (protection against floods; improved rice production) against long term disadvantages (the exclusion of sediment accelerates relative sea-level rise, adding to flood risk in the long term, while sediment borne nutrients are key to agricultural productivity in the long term). Here we use systems dynamics modelling to demonstrate that current rice cultivation strategies are a maladaptation which, under a future of declining sediment loads due to upstream hydropower development, are not sustainable in the long term and present recommendations for more sustainable water management policies in the delta's rice growing region.

Geoscience research helps rice farmers mitigate climate change and world hunger

NASA Astrophysics Data System (ADS)

Runkle, B.; Suvocarev, K.; Reba, M. L.

2017-12-01

Rice is a globally important crop - it comprises 30% of total human caloric consumption - and will be an important crop in the face of expanding population growth. Unfortunately, it is often grown in flooded paddies whose swampy conditions allow microbes to produce the strong greenhouse gas, methane. Over 10% of anthropogenic methane emission to the atmosphere are attributed to rice cultivation. Fortunately, a water-saving irrigation method known as Alternate Wetting and Drying can reduce methane emissions by periodically drying the soil. In our experiments, the method has no effect on rice harvest yields. In our research with rice farmers in Arkansas, we work to evaluate the amount of methane reductions on different fields with this irrigation practice. This research aims to expand the scientific basis for carbon emission reductions programs that enable farmers to be paid for implementing this practice. There are still gaps in our knowledge about how much methane is produced and under what conditions. Our research involves the continuous detection of field methane emissions and correlates then to changes in environmental conditions like the height and temperature of paddy water. Understanding these relationships may help more farmers qualify for credits in the growing carbon emission reductions programs. Because many farmers are already collecting information about their irrigation practices to reduce water applications, we aim to help them re-use this data to more quickly qualify for carbon emissions reductions payments.

Soil CO2 venting as one of the mechanisms for tolerance of Zn deficiency by rice in flooded soils.

PubMed

Affholder, Marie-Cecile; Weiss, Dominik J; Wissuwa, Matthias; Johnson-Beebout, Sarah E; Kirk, Guy J D

2017-12-01

We sought to explain rice (Oryza sativa) genotype differences in tolerance of zinc (Zn) deficiency in flooded paddy soils and the counter-intuitive observation, made in earlier field experiments, that Zn uptake per plant increases with increasing planting density. We grew tolerant and intolerant genotypes in a Zn-deficient flooded soil at high and low planting densities and found (a) plant Zn concentrations and growth increased with planting density and more so in the tolerant genotype, whereas the concentrations of other nutrients decreased, indicating a specific effect on Zn uptake; (b) the effects of planting density and genotype on Zn uptake could only be explained if the plants induced changes in the soil to make Zn more soluble; and (c) the genotype and planting density effects were both associated with decreases in dissolved CO 2 in the rhizosphere soil solution and resulting increases in pH. We suggest that the increases in pH caused solubilization of soil Zn by dissolution of alkali-soluble, Zn-complexing organic ligands from soil organic matter. We conclude that differences in venting of soil CO 2 through root aerenchyma were responsible for the genotype and planting density effects. © 2017 John Wiley & Sons Ltd.

Exploring the Potential of TanDEM-X Data in Rice Monitoring

NASA Astrophysics Data System (ADS)

Erten, E.

2015-12-01

In this work, phenological parameters such as growth stage, calendar estimation, crop density and yield estimation for rice fields are estimated employing TanDEM-X data. Currently, crop monitoring is country-dependent. Most countries have databases based on cadastral information and annual farmer inputs. Inaccuracies are coming from wrong or missing farmer declarations and/or coarsely updated cadastral boundary definitions. This leads to inefficient regulation of the market, frauds as well as to ecological risks. An accurate crop calendar is also missing, since farmers provide estimations in advance and there is no efficient way to know the growth status over large plantations. SAR data is of particular interest for these purposes. The proposed method includes two step approach including field detection and phenological state estimation. In the context of precise farming it is substantial to define field borders which are usually changing every cultivation period. Linking the SAR inherit properties to transplanting practice such as irrigation, the spatial database of rice-planted agricultural crops can be updated. Boundaries of agricultural fields will be defined in the database, and assignments of crops and sowing dates will be continuously updated by our monitoring system considering that sowing practice variously changes depending on the field owner decision. To define and segment rice crops, the system will make use of the fact that rice fields are characterized as flooded parcels separated by path networks composed by soil or rare grass. This natural segmentation is well detectable by inspecting low amplitude and coherence values of bistatic acquisitions. Once the field borders are defined, the phenology estimation of crops monitored at any time is the key point of monitoring. In this aspect the wavelength and the polarization option of TanDEM-X are enough to characterize the small phenological changes. The combination of bistatic interferometry and Radiative Transfer Theory (RTT) with different polarization provides a realistic description of plants including their full morphology (stalks, tillers, leaves and panicles).

Winona, Minnesota Flood Control Project and Waterfront Development.

DTIC Science & Technology

1976-01-01

important part in the food supply for waterfowl. 2.046 Burreed was present and well distributed, but not too abundant prior to flooding. Since...occur, and since it usually seeds well, it is an important food . In wooded areas another cutgrass (Leersia lenticularis) is often more common than is...rice cutgrass. Both species are valuable as duck food . 2.049 Wild rice makes intermittent growth, depending on water conditions, and at the present

Evaluating rice cultivars using subsurface drip irrigation (SDI)

USDA-ARS?s Scientific Manuscript database

Nearly 2.6 million acres of rice in the USA are produced using a flooded paddy system. However due to depletion of ground water, climate patterns that have resulted in reduced precipitation, and increasing competition with urban areas for water resources, the future of rice production in parts of th...

Degradation of chlorpyrifos in tropical rice soils.

PubMed

Das, Subhasis; Adhya, Tapan K

2015-04-01

Chlorpyrifos [O,O-diethyl O-(3,5,6-trichloro-2-pyridinol) phosphorothioate] is used worldwide as an agricultural insecticide against a broad spectrum of insect pests of economically important crops including rice, and soil application to control termites. The insecticide mostly undergoes hydrolysis to diethyl thiophosphoric acid (DETP) and 3,5,6-trichloro-2-pyridinol (TCP), and negligible amounts of other intermediate products. In a laboratory-cum-greenhouse study, chlorpyrifos, applied at a rate of 10 mg kg(-1) soil to five tropical rice soils of wide physico-chemical variability, degraded with a half-life ranging from 27.07 to 3.82 days. TCP was the major metabolite under both non-flooded and flooded conditions. Chlorpyrifos degradation had significant negative relationship with electrical conductivity (EC), cation exchange capacity (CEC), clay and sand contents of the soils under non-flooded conditions. Results indicate that degradation of chlorpyrifos was accelerated with increase in its application frequency, across the representative rice soils. Management regimes including moisture content and presence or absence of rice plants also influenced the process. Biotic factors also play an important role in the degradation of chlorpyrifos as demonstrated by its convincing degradation in mineral salts medium inoculated with non-sterile soil suspension. Copyright © 2015 Elsevier Ltd. All rights reserved.

Investigating the Contribution of the Phosphate Transport Pathway to Arsenic Accumulation in Rice1[W

PubMed Central

Wu, Zhongchang; Ren, Hongyan; McGrath, Steve P.; Wu, Ping; Zhao, Fang-Jie

2011-01-01

Arsenic (As) accumulation in rice (Oryza sativa) may pose a significant health risk to consumers. Plants take up different As species using various pathways. Here, we investigated the contribution of the phosphate (Pi) transport pathway to As accumulation in rice grown hydroponically or under flooded soil conditions. In hydroponic experiments, a rice mutant defective in OsPHF1 (for phosphate transporter traffic facilitator1) lost much of the ability to take up Pi and arsenate and to transport them from roots to shoots, whereas transgenic rice overexpressing either the Pi transporter OsPht1;8 (OsPT8) or the transcription factor OsPHR2 (for phosphate starvation response2) had enhanced abilities of Pi and arsenate uptake and translocation. OsPT8 was found to have a high affinity for both Pi and arsenate, and its overexpression increased the maximum influx by 3- to 5-fold. In arsenate-treated plants, both arsenate and arsenite were detected in the xylem sap, with the proportion of the latter increasing with the exposure time. Under the flooded soil conditions, the phf1 mutant took up less Pi whereas the overexpression lines took up more Pi. But there were no similar effects on As accumulation and distribution. Rice grain contained predominantly dimethylarsinic acid and arsenite, with arsenate being a minor species. These results suggest that the Pi transport pathway contributed little to As uptake and transport to grain in rice plants grown in flooded soil. Transgenic approaches to enhance Pi acquisition from paddy soil through the overexpression of Pi transporters may not increase As accumulation in rice grain. PMID:21715673

Control of arsenic mobilization in paddy soils by manganese and iron oxides.

PubMed

Xu, Xiaowei; Chen, Chuan; Wang, Peng; Kretzschmar, Ruben; Zhao, Fang-Jie

2017-12-01

Reductive mobilization of arsenic (As) in paddy soils under flooded conditions is an important reason for the relatively high accumulation of As in rice, posing a risk to food safety and human health. The extent of As mobilization varies widely among paddy soils, but the reasons are not well understood. In this study, we investigated As mobilization in six As-contaminated paddy soils (total As ranging from 73 to 122 mg kg -1 ) in flooded incubation and pot experiments. Arsenic speciation in the solution and solid phases were determined. The magnitude of As mobilization into the porewater varied by > 100 times among the six soils. Porewater As concentration correlated closely with the concentration of oxalate-extractable As, suggesting that As associated with amorphous iron (oxyhydr)oxides represents the potentially mobilizable pool of As under flooded conditions. Soil containing a high level of manganese oxides showed the lowest As mobilization, likely because Mn oxides retard As mobilization by slowing down the drop of redox potential upon soil flooding and maintaining a higher arsenate to arsenite ratio in the solid and solution phases. Additions of a synthetic Mn oxide (hausmannite) to two paddy soils increased arsenite oxidation, decreased As mobilization into the porewater and decreased As concentrations in rice grain and straw. Consistent with previous studies using simplified model systems or pure mineral phases, the present study shows that Mn oxides and amorphous Fe (oxyhydr)oxides are important factors controlling reductive As mobilization in As-contaminated paddy soils. In addition, this study also suggests a potential mitigation strategy using exogenous Mn oxides to decrease As uptake by rice in paddy soils containing low levels of indigenous Mn oxides, although further work is needed to verify its efficacy and possible secondary effects under field conditions. Copyright © 2017 Elsevier Ltd. All rights reserved.

Elucidating Rice Cell Metabolism under Flooding and Drought Stresses Using Flux-Based Modeling and Analysis1[C][W][OPEN

PubMed Central

Lakshmanan, Meiyappan; Zhang, Zhaoyang; Mohanty, Bijayalaxmi; Kwon, Jun-Young; Choi, Hong-Yeol; Nam, Hyung-Jin; Kim, Dong-Il; Lee, Dong-Yup

2013-01-01

Rice (Oryza sativa) is one of the major food crops in world agriculture, especially in Asia. However, the possibility of subsequent occurrence of flood and drought is a major constraint to its production. Thus, the unique behavior of rice toward flooding and drought stresses has required special attention to understand its metabolic adaptations. However, despite several decades of research investigations, the cellular metabolism of rice remains largely unclear. In this study, in order to elucidate the physiological characteristics in response to such abiotic stresses, we reconstructed what is to our knowledge the first metabolic/regulatory network model of rice, representing two tissue types: germinating seeds and photorespiring leaves. The phenotypic behavior and metabolic states simulated by the model are highly consistent with our suspension culture experiments as well as previous reports. The in silico simulation results of seed-derived rice cells indicated (1) the characteristic metabolic utilization of glycolysis and ethanolic fermentation based on oxygen availability and (2) the efficient sucrose breakdown through sucrose synthase instead of invertase. Similarly, flux analysis on photorespiring leaf cells elucidated the crucial role of plastid-cytosol and mitochondrion-cytosol malate transporters in recycling the ammonia liberated during photorespiration and in exporting the excess redox cofactors, respectively. The model simulations also unraveled the essential role of mitochondrial respiration during drought stress. In the future, the combination of experimental and in silico analyses can serve as a promising approach to understand the complex metabolism of rice and potentially help in identifying engineering targets for improving its productivity as well as enabling stress tolerance. PMID:23753178

Gas film retention and underwater photosynthesis during field submergence of four contrasting rice genotypes

PubMed Central

Winkel, Anders; Pedersen, Ole; Ella, Evangelina; Ismail, Abdelbagi M.; Colmer, Timothy D.

2014-01-01

Floods can completely submerge some rice (Oryza sativa L.) fields. Leaves of rice have gas films that aid O2 and CO2 exchange under water. The present study explored the relationship between gas film persistence and underwater net photosynthesis (PN) as influenced by genotype and submergence duration. Four contrasting genotypes (FR13A, IR42, Swarna, and Swarna-Sub1) were submerged for 13 days in the field and leaf gas films, chlorophyll, and the capacity for underwater PN at near ambient and high CO2 were assessed with time of submergence. At high CO2 during the PN assay, all genotypes initially showed high rates of underwater PN, and this rate was not affected by time of submergence in FR13A. This superior photosynthetic performance of FR13A was not evident in Swarna-Sub1 (carrying the SUB1 QTL) and the declines in underwater PN in both Swarna-Sub1 and Swarna were equal to that in IR42. At near ambient CO2 concentration, underwater PN declined in all four genotypes and this corresponded with loss of leaf gas films with time of submergence. FR13A retained leaf gas films moderately longer than the other genotypes, but gas film retention was not linked to SUB1. Diverse rice germplasm should be screened for gas film persistence during submergence, as this trait could potentially increase carbohydrate status and internal aeration owing to increased underwater PN, which contributes to submergence tolerance in rice. PMID:24759881

Gas film retention and underwater photosynthesis during field submergence of four contrasting rice genotypes.

PubMed

Winkel, Anders; Pedersen, Ole; Ella, Evangelina; Ismail, Abdelbagi M; Colmer, Timothy D

2014-07-01

Floods can completely submerge some rice (Oryza sativa L.) fields. Leaves of rice have gas films that aid O2 and CO2 exchange under water. The present study explored the relationship between gas film persistence and underwater net photosynthesis (PN) as influenced by genotype and submergence duration. Four contrasting genotypes (FR13A, IR42, Swarna, and Swarna-Sub1) were submerged for 13 days in the field and leaf gas films, chlorophyll, and the capacity for underwater PN at near ambient and high CO2 were assessed with time of submergence. At high CO2 during the PN assay, all genotypes initially showed high rates of underwater PN, and this rate was not affected by time of submergence in FR13A. This superior photosynthetic performance of FR13A was not evident in Swarna-Sub1 (carrying the SUB1 QTL) and the declines in underwater PN in both Swarna-Sub1 and Swarna were equal to that in IR42. At near ambient CO2 concentration, underwater PN declined in all four genotypes and this corresponded with loss of leaf gas films with time of submergence. FR13A retained leaf gas films moderately longer than the other genotypes, but gas film retention was not linked to SUB1. Diverse rice germplasm should be screened for gas film persistence during submergence, as this trait could potentially increase carbohydrate status and internal aeration owing to increased underwater PN, which contributes to submergence tolerance in rice. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Agronomic and physiological performance of Teqing x Lemont introgression rice (Oryza sativa L.) lines under limited irrigation system

USDA-ARS?s Scientific Manuscript database

Rice is a staple food for almost half of the world. Most rice in the world, including the USA, is produced under a flooded paddy system that makes rice one of the most irrigated grain crops on earth. With many water resources being depleted due to high irrigation demands, it has become essential to ...

Examining responses of ecosystem carbon exchange to environmental changes using particle filtering mathod

NASA Astrophysics Data System (ADS)

Yokozawa, M.

2017-12-01

Attention has been paid to the agricultural field that could regulate ecosystem carbon exchange by water management and residual treatments. However, there have been less known about the dynamic responses of the ecosystem to environmental changes. In this study, focussing on paddy field, where CO2 emissions due to microbial decomposition of organic matter are suppressed and alternatively CH4 emitted under flooding condition during rice growth season and subsequently CO2 emission following the fallow season after harvest, the responses of ecosystem carbon exchange were examined. We conducted model data fusion analysis for examining the response of cropland-atmosphere carbon exchange to environmental variation. The used model consists of two sub models, paddy rice growth sub-model and soil decomposition sub-model. The crop growth sub-model mimics the rice plant growth processes including formation of reproductive organs as well as leaf expansion. The soil decomposition sub-model simulates the decomposition process of soil organic carbon. Assimilating the data on the time changes in CO2 flux measured by eddy covariance method, rice plant biomass, LAI and the final yield with the model, the parameters were calibrated using a stochastic optimization algorithm with a particle filter method. The particle filter method, which is one of the Monte Carlo filters, enable us to evaluating time changes in parameters based on the observed data until the time and to make prediction of the system. Iterative filtering and prediction with changing parameters and/or boundary condition enable us to obtain time changes in parameters governing the crop production as well as carbon exchange. In this study, we focused on the parameters related to crop production as well as soil carbon storage. As the results, the calibrated model with estimated parameters could accurately predict the NEE flux in the subsequent years. The temperature sensitivity, denoted by Q10s in the decomposition rate of soil organic carbon (SOC) were obtained as 1.4 for no cultivation period and 2.9 for cultivation period (submerged soil condition in flooding season). It suggests that the response of ecosystem carbon exchange differs due to SOC decomposition process which is sensitive to environmental variation during paddy rice cultivation period.

Methylmercury production in sediment from agricultural and non-agricultural wetlands in the Yolo Bypass, California, USA

USGS Publications Warehouse

Marvin-DiPasquale, Mark; Windham-Myers, Lisamarie; Agee, Jennifer L.; Kakouros, Evangelos; Kieu, Le H.; Fleck, Jacob A.; Alpers, Charles N.; Stricker, Craig A.

2014-01-01

As part of a larger study of mercury (Hg) biogeochemistry and bioaccumulation in agricultural (rice growing) and non-agricultural wetlands in California's Central Valley, USA, seasonal and spatial controls on methylmercury (MeHg) production were examined in surface sediment. Three types of shallowly-flooded agricultural wetlands (white rice, wild rice, and fallow fields) and two types of managed (non-agricultural) wetlands (permanently and seasonally flooded) were sampled monthly-to-seasonally. Dynamic seasonal changes in readily reducible ‘reactive’ mercury (Hg(II)R), Hg(II)-methylation rate constants (kmeth), and concentrations of electron acceptors (sulfate and ferric iron) and donors (acetate), were all observed in response to field management hydrology, whereas seasonal changes in these parameters were more muted in non-agricultural managed wetlands. Agricultural wetlands exhibited higher sediment MeHg concentrations than did non-agricultural wetlands, particularly during the fall through late-winter (post-harvest) period. Both sulfate- and iron-reducing bacteria have been implicated in MeHg production, and both were demonstrably active in all wetlands studied. Stoichiometric calculations suggest that iron-reducing bacteria dominated carbon flow in agricultural wetlands during the growing season. Sulfate-reducing bacteria were not stimulated by the addition of sulfate-based fertilizer to agricultural wetlands during the growing season, suggesting that labile organic matter, rather than sulfate, limited their activity in these wetlands. Along the continuum of sediment geochemical conditions observed, values of kmeth increased approximately 10,000-fold, whereas Hg(II)R decreased 100-fold. This suggests that, with respect to the often opposing trends of Hg(II)-methylating microbial activity and Hg(II) availability for methylation, microbial activity dominated the Hg(II)-methylation process, and that along this biogeochemical continuum, conditions that favored microbial sulfate reduction resulted in the highest calculated MeHg production potential rates. Rice straw management options aimed at limiting labile carbon supplies to surface sediment during the post-harvest fall–winter period may be effective in limiting MeHg production within agricultural wetlands.

Methylmercury production in sediment from agricultural and non-agricultural wetlands in the Yolo Bypass, California, USA.

PubMed

Marvin-DiPasquale, Mark; Windham-Myers, Lisamarie; Agee, Jennifer L; Kakouros, Evangelos; Kieu, Le H; Fleck, Jacob A; Alpers, Charles N; Stricker, Craig A

2014-06-15

As part of a larger study of mercury (Hg) biogeochemistry and bioaccumulation in agricultural (rice growing) and non-agricultural wetlands in California's Central Valley, USA, seasonal and spatial controls on methylmercury (MeHg) production were examined in surface sediment. Three types of shallowly-flooded agricultural wetlands (white rice, wild rice, and fallow fields) and two types of managed (non-agricultural) wetlands (permanently and seasonally flooded) were sampled monthly-to-seasonally. Dynamic seasonal changes in readily reducible 'reactive' mercury (Hg(II)R), Hg(II)-methylation rate constants (kmeth), and concentrations of electron acceptors (sulfate and ferric iron) and donors (acetate), were all observed in response to field management hydrology, whereas seasonal changes in these parameters were more muted in non-agricultural managed wetlands. Agricultural wetlands exhibited higher sediment MeHg concentrations than did non-agricultural wetlands, particularly during the fall through late-winter (post-harvest) period. Both sulfate- and iron-reducing bacteria have been implicated in MeHg production, and both were demonstrably active in all wetlands studied. Stoichiometric calculations suggest that iron-reducing bacteria dominated carbon flow in agricultural wetlands during the growing season. Sulfate-reducing bacteria were not stimulated by the addition of sulfate-based fertilizer to agricultural wetlands during the growing season, suggesting that labile organic matter, rather than sulfate, limited their activity in these wetlands. Along the continuum of sediment geochemical conditions observed, values of kmeth increased approximately 10,000-fold, whereas Hg(II)R decreased 100-fold. This suggests that, with respect to the often opposing trends of Hg(II)-methylating microbial activity and Hg(II) availability for methylation, microbial activity dominated the Hg(II)-methylation process, and that along this biogeochemical continuum, conditions that favored microbial sulfate reduction resulted in the highest calculated MeHg production potential rates. Rice straw management options aimed at limiting labile carbon supplies to surface sediment during the post-harvest fall-winter period may be effective in limiting MeHg production within agricultural wetlands. © 2013.

7 CFR 457.141 - Rice crop insurance provisions.

Code of Federal Regulations, 2013 CFR

2013-01-01

...) That is flood irrigated; and (d) That is not wild rice. 7. Insurable Acreage In addition to the... loss that occur during the insurance period: (1) Adverse weather conditions (except drought); (2) Fire...

7 CFR 457.141 - Rice crop insurance provisions.

Code of Federal Regulations, 2012 CFR

2012-01-01

...) That is flood irrigated; and (d) That is not wild rice. 7. Insurable Acreage In addition to the... loss that occur during the insurance period: (1) Adverse weather conditions (except drought); (2) Fire...

7 CFR 457.141 - Rice crop insurance provisions.

Code of Federal Regulations, 2011 CFR

2011-01-01

...) That is flood irrigated; and (d) That is not wild rice. 7. Insurable Acreage In addition to the... loss that occur during the insurance period: (1) Adverse weather conditions (except drought); (2) Fire...

7 CFR 457.141 - Rice crop insurance provisions.

Code of Federal Regulations, 2014 CFR

2014-01-01

...) That is flood irrigated; and (d) That is not wild rice. 7. Insurable Acreage In addition to the... loss that occur during the insurance period: (1) Adverse weather conditions (except drought); (2) Fire...

Methane emission from flooded soils - from microorganisms to the atmosphere

NASA Astrophysics Data System (ADS)

Conrad, Ralf

2016-04-01

Methane is an important greenhouse gas that is affected by anthropogenic activity. The annual budget of atmospheric methane, which is about 600 million tons, is by more than 75% produced by methanogenic archaea. These archaea are the end-members of a microbial community that degrades organic matter under anaerobic conditions. Flooded rice fields constitute a major source (about 10%) of atmospheric methane. After flooding of soil, anaerobic processes are initiated, finally resulting in the disproportionation of organic matter to carbon dioxide and methane. This process occurs in the bulk soil, on decaying organic debris and in the rhizosphere. The produced methane is mostly ventilated through the plant vascular system into the atmosphere. This system also allows the diffusion of oxygen into the rizosphere, where part of the produced methane is oxidized by aerobic methanotrophic bacteria. More than 50% of the methane production is derived from plant photosynthetic products and is formed on the root surface. Methanocellales are an important group of methanogenic archaea colonizing rice roots. Soils lacking this group seem to result in reduced root colonization and methane production. In rice soil methane is produced by two major paths of methanogenesis, the hydrogenotrophic one reducing carbon dioxide to methane, and the aceticlastic one disproportionating acetate to methane and carbon dioxide. Theoretically, at least two third of the methane should be produced by aceticlastic and the rest by hydrogenotrophic methanogenesis. In nature, however, the exact contribution of the two paths can vary from zero to 100%. Several environmental factors, such as temperature and quality of organic matter affect the path of methane production. The impact of these factors on the composition and activity of the environmental methanogenic microbial community will be discussed.

Seed germination ecology of Echinochloa glabrescens and its implication for management in rice (Oryza sativa L.).

PubMed

Opeña, Jhoana L; Chauhan, Bhagirath S; Baltazar, Aurora M

2014-01-01

Echinochloa glabrescens is a C4 grass weed that is very competitive with rice when left uncontrolled. The competitive ability of weeds is intensified in direct-seeded rice production systems. A better understanding is needed of factors affecting weed seed germination, which can be used as a component of integrated weed management in direct-seeded rice. This study was conducted to determine the effects of temperature, light, salt and osmotic stress, burial depth, crop residue, time and depth of flooding, and herbicide application on the emergence, survival, and growth of two populations [Nueva Ecija (NE) and Los Baños (IR)] of E. glabrescens. Seeds from both populations germinated at all temperatures. The NE population had a higher germination rate (88%) from light stimulation than did the IR population (34%). The salt concentration and osmotic potential required to inhibit 50% of germination were 313 mM and -0.24 MPa, respectively, for the NE population and 254 mM and -0.33 MPa, respectively, for the IR population. Emergence in the NE population was totally inhibited at 4-cm burial depth in the soil, whereas that of the IR population was inhibited at 8 cm. Compared with zero residue, the addition of 5 t ha(-1) of rice residue reduced emergence in the NE and IR populations by 38% and 9%, respectively. Early flooding (within 2 days after sowing) at 2-cm depth reduced shoot growth by 50% compared with non-flooded conditions. Pretilachlor applied at 0.075 kg ai ha(-1) followed by shallow flooding (2-cm depth) reduced seedling emergence by 94-96% compared with the nontreated flooded treatment. Application of postemergence herbicides at 4-leaf stage provided 85-100% control in both populations. Results suggest that integration of different strategies may enable sustainable management of this weed and of weeds with similar germination responses.

Seed Germination Ecology of Echinochloa glabrescens and Its Implication for Management in Rice (Oryza sativa L.)

PubMed Central

Opeña, Jhoana L.; Chauhan, Bhagirath S.; Baltazar, Aurora M.

2014-01-01

Echinochloa glabrescens is a C4 grass weed that is very competitive with rice when left uncontrolled. The competitive ability of weeds is intensified in direct-seeded rice production systems. A better understanding is needed of factors affecting weed seed germination, which can be used as a component of integrated weed management in direct-seeded rice. This study was conducted to determine the effects of temperature, light, salt and osmotic stress, burial depth, crop residue, time and depth of flooding, and herbicide application on the emergence, survival, and growth of two populations [Nueva Ecija (NE) and Los Baños (IR)] of E. glabrescens. Seeds from both populations germinated at all temperatures. The NE population had a higher germination rate (88%) from light stimulation than did the IR population (34%). The salt concentration and osmotic potential required to inhibit 50% of germination were 313 mM and −0.24 MPa, respectively, for the NE population and 254 mM and −0.33 MPa, respectively, for the IR population. Emergence in the NE population was totally inhibited at 4-cm burial depth in the soil, whereas that of the IR population was inhibited at 8 cm. Compared with zero residue, the addition of 5 t ha−1 of rice residue reduced emergence in the NE and IR populations by 38% and 9%, respectively. Early flooding (within 2 days after sowing) at 2-cm depth reduced shoot growth by 50% compared with non-flooded conditions. Pretilachlor applied at 0.075 kg ai ha−1 followed by shallow flooding (2-cm depth) reduced seedling emergence by 94−96% compared with the nontreated flooded treatment. Application of postemergence herbicides at 4-leaf stage provided 85−100% control in both populations. Results suggest that integration of different strategies may enable sustainable management of this weed and of weeds with similar germination responses. PMID:24642568

Effect of allelopathic rice varieties combined with cultural management options on paddy field weeds.

PubMed

Kong, Chui-Hua; Hu, Fei; Wang, Peng; Wu, Jing-Lun

2008-03-01

A number of techniques, including cultural management, allelopathy and bioherbicide, have been considered as alternatives for synthetic herbicides, but successful weed control will require the careful integration of these multiple techniques. This study was conducted to assess the use of allelopathic rice varieties in combination with cultural management options on paddy weeds, in order to develop an allelopathy-based technique to reduce herbicide use in paddies. The weed-suppressive effects of the rice varieties tested varied highly with allelopathic trait, planting pattern and cultural management including planting density, flooding depth and duration and supply of nitrogen. Allelopathic rice varieties PI312777 and Huagan-1 demonstrated much stronger weed suppression than the non-allelopathic variety Huajianxian under the same planting pattern and cultural management. Their weed-suppressive effect was increased with cultural management options. In particular, if integrated cultural management options of allelopathic rice varieties included a low-dose (bensulfuron-methyl, 25 g AI ha(-1), a third of the recommended dose) herbicide application, the emergence and growth of most weeds found in paddy fields was completely controlled. No grain yield reduction for allelopathic varieties occurred under integrated cultural management options, whereas with the non-allelopathic variety a reduction of up to 45-60% was measurable even with the low-dose herbicide application. The allelopathic potential of rice varieties will likely have a great impact on paddy weed control if integrated with cultural management options and application of low doses of herbicides. Therefore, it is feasible to reduce herbicide input in paddies if allelopathic rice is grown under integrated cultural management practices. (c) 2008 Society of Chemical Industry.

Short-term complete submergence of rice at the tillering stage increases yield.

PubMed

Zhang, Yajie; Wang, Zhensheng; Li, Lei; Zhou, Qun; Xiao, Yao; Wei, Xing; Zhou, Mingyao

2015-01-01

Flooding is a major threat to agricultural production. Most studies have focused on the lower water storage limit in rice fields, whereas few studies have examined the upper water storage limit. This study aimed to explore the effect of waterlogging at the rice tillering stage on rice growth and yield. The early-ripening late japonica variety Yangjing 4227 was selected for this study. The treatments included different submergence depths (submergence depth/plant height: 1/2 (waist submergence), 2/3 (neck submergence), and 1/1 (complete submergence)) and durations (1, 3, and 5 d). The control group was treated with the conventional alternation of drying and wetting. The effects of waterlogging at the tillering stage on root characteristics, dry matter production, nitrogen and phosphorus accumulation, yield, yield components, and 1-aminocyclopropane-1-carboxylic acid synthase (ACS) gene expression were explored. Compared with the control group, the 1/1 group showed significant increases in yield, seed-setting rate, photosynthetically efficient leaf area, and OS-ACS3 gene expression after 1 d of submergence. The grain number per panicle, dry weight of the aboveground and belowground parts, and number of adventitious roots also increased. Correlation analysis revealed a significant positive correlation between the panicle number and nitrogen content; however, no significant correlation was found for phosphorus content. If a decrease in rice yield of less than 10% is acceptable, half, 2/3, and complete submergence of the plants can be performed at the tillering stage for 1-3 d; this treatment will increase the space available for rice field water management/control and will improve rainfall resource utilization.

Irrigation with oxygen-nanobubble water can reduce methane emission and arsenic dissolution in a flooded rice paddy

NASA Astrophysics Data System (ADS)

Minamikawa, Kazunori; Takahashi, Masayoshi; Makino, Tomoyuki; Tago, Kanako; Hayatsu, Masahito

2015-08-01

A remarkable feature of nanobubbles (<10-6 m in diameter) is their long lifetime in water. Supplying oxygen-nanobubbles (NBs) to continuously flooded paddy soil may retard the development of reductive conditions, thereby reducing the emission of methane (CH4), a potent greenhouse gas, and dissolution of arsenic, an environmental load. We tested this hypothesis by performing a pot experiment and measuring redox-related variables. The NBs were introduced into control water (with properties similar to those of river water) using a commercially available generator. Rice (Oryza sativa L.) growth did not differ between plants irrigated with NB water and those irrigated with control water, but NB water significantly (p < 0.05) reduced cumulative CH4 emission during the rice-growing season by 21%. The amounts of iron, manganese, and arsenic that leached into the drainage water before full rice heading were also reduced by the NB water. Regardless of the water type, weekly-measured CH4 flux was linearly correlated with the leached iron concentration during the rice-growing season (r = 0.74, p < 0.001). At the end of the experiment, the NB water significantly lowered the soil pH in the 0-5 cm layer, probably because of the raised redox potential. The population of methanogenic Archaea (mcrA copy number) in the 0-5 cm layer was significantly increased by the NB water, but we found no correlation between the mcrA copy number and the cumulative CH4 emission (r = -0.08, p = 0.85). In pots without rice plants, soil reduction was not enhanced, regardless of the water type. The results indicate that NB water reduced CH4 emission and arsenic dissolution through an oxidative shift of the redox conditions in the flooded soil. We propose the use of NB water as a tool for controlling redox conditions in flooded paddy soils.

Mercury cycling in agricultural and non-agricultural wetlands in the Yolo Bypass Wildlife Area, California: bioaccumulation in small fish

NASA Astrophysics Data System (ADS)

Ackerman, J. T.; Eagles-Smith, C. A.; Miles, K. A.; Ricca, M. A.

2007-12-01

We examined the bioaccumulation of mercury in small fish within white rice, wild rice, and permanent wetland habitats at the Yolo Wildlife Area during the 2007 rice growing season. We introduced 30 mosquito fish in each of four cages placed at the inlet, center, and outlet (two cages) of each wetland in June, immediately after the white rice fields were re-flooded after being seeded. All fish were removed from their cages 60-days after their introduction, with the exception that ten fish from each of the second cages at the outlets were removed 30-days after introduction to assess temporal trends in mercury exposure. Mercury concentrations will be compared between fish that were introduced into cages and reference fish that originated from the same fish stock (Sacramento County Vector Control). We also measured fish length and mass both when they were introduced and collected to 1) control for growth effects on mercury bioaccumulation and 2) examine whether wetland habitat influenced growth rates. Fish are currently being analyzed for mercury and results will be available by the conference.

Genetic and environmental effects in the TeQing-into-Lemont (TIL) population under flooded and alternating wet-dry conditions

USDA-ARS?s Scientific Manuscript database

Over the last decade there has been growing concern regarding sustainability of US rice production due to multi-year droughts and depletion of ground water resources. There is a need for research to develop rice varieties that are optimized for production using less irrigation water. One rice produc...

Tracing remobilization of nutrients and toxic elements after application of rice straw or derived ash / biochar in paddy soils

NASA Astrophysics Data System (ADS)

Schaller, Jörg; Wang, Jiajia; Planer-Friedrich, Britta

2017-04-01

More than 600 million tons of rice straw are produced each year as byproduct of rice grain production. As an increasing application, besides e.g. composting or fodder for animals, the straw remains on the field for decomposition and nutrient supply. A central concern during rice cultivation is accumulation of arsenic, but it is currently unclear how the application of rice straw or derived ash or biochar to paddy soils will influence arsenic uptake by the next generation of rice plants. Consequently, we assessed the element mobilization via soil microcosm incubations with straw or derived ash or biochar or without those amendments under flooding (40 days) and subsequent drainage (14 days). We focused on elements potentially influencing the uptake of arsenic by the next generation of rice plants (e.g. silicon, phosphorus, iron), or which are nutrients but toxic themselves at higher levels (sulfur, sulfide, iron, iron(II), manganese, copper, and zinc). We found significant differences in the release of arsenic, iron(II), sulfide, total sulfur, DOC, manganese, copper, and zinc . For example highest pore water Mn and As concentrations were found for soil amended with straw, whereas the straw amendment reduced S mobilization, possibly due to sulfate reduction by straw decomposing microbes. For P, we found highest pore water concentrations for straw, followed by biochar, ash and control. In summary, application of rice straw or derived ash or biochar strongly affect the element availability in paddy soil.

Effects of Carbon in Flooded Paddy Soils: Implications for Microbial Activity and Arsenic Mobilization

NASA Astrophysics Data System (ADS)

Avancha, S.; Boye, K.

2014-12-01

In the Mekong delta in Cambodia, naturally occurring arsenic (originating from erosion in the Himalaya Mountains) in paddy soils is mobilized during the seasonal flooding. As a consequence, rice grown on the flooded soils may take up arsenic and expose people eating the rice to this carcinogenic substance. Microbial activity will enhance or decrease the mobilization of arsenic depending on their metabolic pathways. Among the microbes naturally residing in the soil are denitrifying bacteria, sulfate reducers, metal reducers (Fe, Mn), arsenic reducers, methanogens, and fermenters, whose activity varies based on the presence of oxygen. The purpose of the experiment was to assess how different amendments affect the microbial activity and the arsenic mobilization during the transition from aerobic to anaerobic metabolism after flooding of naturally contaminated Cambodian soil. In a batch experiment, we investigated how the relative metabolic rate of naturally occurring microbes could vary with different types of organic carbon. The experiment was designed to measure the effects of various sources of carbon (dried rice straw, charred rice straw, manure, and glucose) on the microbial activity and arsenic release in an arsenic-contaminated paddy soil from Cambodia under flooded conditions. All amendments were added based on the carbon content in order to add 0.036 g of carbon per vial. The soil was flooded with a 10mM TRIS buffer solution at pH 7.04 in airtight 25mL serum vials and kept at 25 °C. We prepared 14 replicates per treatment to sample both gas and solution. On each sampling point, the solution replicates were sampled destructively. The gas replicates continued on and were sampled for both gas and solution on the final day of the experiment. We measured pH, total arsenic, methane, carbon dioxide, and nitrous oxide at 8 hours, 1.5 days, 3.33 days, and 6.33 days from the start of the experiment.

The effect of alternate wetting and drying on methane fluxes on different varieties of European rice

NASA Astrophysics Data System (ADS)

Oliver, Viktoria; Cochrane, Nicole; Monaco, Stefano; Volante, Andrea; Orasen, Gabriele; Price, Adam; Arn Teh, Yit

2017-04-01

In Europe, rice is grown (467 000 ha) under permanently flooded conditions (PF) using irrigation waters of major rivers. Climate change, which has led to a greater fluctuation in river flows, is a major challenge to rice production systems, which depend on large and consistent water supplies. This challenge will become more acute in the future, with more frequent extreme weather (e.g. drought) predicted under climate change and increased demands for rice. Alternate wetting and drying (AWD) is a system in where irrigation is applied to obtain 2-5 cm of field water depth, after which the soil is allowed to drain naturally to typically 15 cm below the surface before re-wetting once more. Preliminary studies suggest that AWD can reduce water use by up 30 %, with no net loss in yield but significantly reducing CH4 emissions. The work presented here evaluated the impacts of AWD on the productivity and yield of twelve varieties of European rice, whilst simultaneously measuring CH4 fluxes and plant biomass allocation patterns under different treatment regimes. Field experiments were conducted in the Piedmont region (northern Italy Po river plain) in a loamy soil during the growing season of 2015 in a 2-factor paired plot design, with water treatment (AWD, PF) and variety (12 European varieties) as factors (n=4 per variety per treatment). The varieties chosen were commercially important cultivars from across the rice growing regions of Europe (6 Italian, 3 French, 3 Spanish). Greenhouse gas fluxes were taken using the static chamber approach 11 times during the growing season between May and October 2015. Environmental variables (soil moisture, temperature, water table depth, water potential) were collected concomitantly. Above and belowground biomass were determined by destructively harvesting at the end of the growing season. Belowground biomass was estimated by manually extracting roots from 30 cm deep soil cores and aboveground biomass estimated by collecting and weighing the rachis, grain and straw on a 1 metre linear section from every variety of rice. Overall, there was no significant effect between AWD and PF systems on rough grain production (863 and 822 g DM m-2) or straw yield (776 and 813 g DM m-2) for PF and AWD, respectively. The alternate wetting and drying sites had significantly lower CH4 fluxes 0.197 ± 0.066 compared to the permanently flooded 0.557 ± 0.090 g C m-2 d-1, with Baldo (Italian) producing the highest emissions. Overall there was ˜ 40 % water saving. The results from this study highlight that this novel water management strategy for European rice can have multiple environmental benefits without sacrificing yield.

Guidance for Large-scale Implementation of Alternate Wetting and Drying: A Biophysical Suitability Assessment

NASA Astrophysics Data System (ADS)

Sander, B. O.; Wassmann, R.; Nelson, A.; Palao, L.; Wollenberg, E.; Ishitani, M.

2014-12-01

The alternate wetting and drying (AWD) technology for rice production does not only save 15-30% of irrigation water, it also reduces methane emissions by up to 70%. AWD is defined by periodic drying and re-flooding of a rice field. Due to its high mitigation potential and its simplicity to execute this practice AWD has gained a lot of attention in recent years. The Climate and Clean Air Coalition (CCAC) has put AWD high on its agenda and funds a project to guide implementation of this technology in Vietnam, Bangladesh and Colombia. One crucial activity is a biophysical suitability assessment for AWD in the three countries. For this, we analyzed rainfall and soil data as well as potential evapotranspiration to assess if the water balance allows practicing AWD or if precipitation is too high for rice fields to fall dry. In my talk I will outline key factors for a successful large-scale implementation of AWD with a focus on the biophysical suitability assessment. The seasonal suitability maps that we generated highlight priority areas for AWD implementation and guide policy makers to informed decisions about meaningful investments in infrastructure and extension work.

Modeling impacts of water and fertilizer management on the ecosystem service of rice rotated cropping system in China

NASA Astrophysics Data System (ADS)

Chen, H.; Yu, C.; Li, C.

2015-12-01

Sustainable agricultural intensification demand optimum resource managements of agro-ecosystems. Detailed information on the impacts of water use and nutrient application on agro-ecosystem services including crop yields, greenhouse gas (GHG) emissions and nitrogen (N) loss is the key to guide field managements. In this study, we use the DeNitrification-DeComposition (DNDC) model to simulate the biogeochemical processes for rice rotated cropping systems in China. We set varied scenarios of water use in more than 1600 counties, and derived optimal rates of N application for each county in accordance to water use scenarios. Our results suggest that 0.88 ± 0.33 Tg per year (mean ± standard deviation) of synthetic N could be reduced without reducing rice yields, which accounts for 15.7 ± 5.9% of current N application in China. Field managements with shallow flooding and optimal N applications could enhance ecosystem services on a national scale, leading to 34.3% reduction of GHG emissions (CH4, N2O, and CO2), 2.8% reduction of overall N loss (NH3 volatilization, denitrification and N leaching) and 1.7% increase of rice yields, as compared to current management conditions. Among provinces with major rice production, Jiangsu, Yunnan, Guizhou, and Hubei could achieve more than 40% reduction of GHG emissions under appropriate water managements, while Zhejiang, Guangdong, and Fujian could reduce more than 30% N loss with optimal N applications. Our modeling efforts suggest that China is likely to benefit from reforming water and fertilization managements for rice rotated cropping system in terms of sustainable crop yields, GHG emission mitigation and N loss reduction, and the reformation should be prioritized in the above-mentioned provinces. Keywords: water regime, nitrogen fertilization, sustainable management, ecological modeling, DNDC

A Clomazone Immunoassay to Study the Environmental Fate of the Herbicide in Rice (Oryza sativa) Agriculture

PubMed Central

Carlomagno, M.; Mathó, C.; Cantou, G.; Sanborn, J. R.; Last, J. A.; Hammock, B. D.; Roel, A.; González, D.; González-Sapienza, G.

2010-01-01

The environmental impact of rice agriculture is poorly studied in developing countries, mainly, due to limitations of the analytical capacity. Here we report the development of a clomazone ELISA as a fast and cost-effective tool to monitor the dissipation of this herbicide along the harvest. Antibodies were prepared using different strategies of hapten conjugation, and the best hapten/antibody pair was selected. It proved to be a reliable tool to measure the herbicide in the 2.0-20 ng/mL range in field samples, with excellent correlation with HPLC results. The assay was used to study the dissipation of the herbicide in floodwater of experimental rice paddies in Uruguay. Large differences in the residual amount of herbicide were observed depending on the flooding practices. Due to its robustness and simplicity, the assay may be useful to delineate and monitor management practices that can contribute to minimizing the release of the herbicide in the environment. PMID:20302341

Economic assessment of different mulches in conventional and water-saving rice production systems.

PubMed

Jabran, Khawar; Hussain, Mubshar; Fahad, Shah; Farooq, Muhammad; Bajwa, Ali Ahsan; Alharrby, Hesham; Nasim, Wajid

2016-05-01

Water-saving rice production systems including alternate wetting and drying (AWD) and aerobic rice (AR) are being increasingly adopted by growers due to global water crises. Application of natural and artificial mulches may further improve water economy of water-saving rice production systems. Conventionally flooded rice (CFR) system has been rarely compared with AWD and AR in terms of economic returns. In this 2-year field study, we compared CFR with AWD and AR (with and without straw and plastic mulches) for the cost of production and economic benefits. Results indicated that CFR had a higher production cost than AWD and AR. However, application of mulches increased the cost of production of AWD and AR production systems where plastic mulch was expensive than straw mulch. Although the mulching increased the cost of production for AWD and AR, the gross income of these systems was also improved significantly. The gross income from mulched plots of AWD and AR was higher than non-mulched plots of the same systems. In conclusion, AWD and AR effectively reduce cost of production by economizing the water use. However, the use of natural and artificial mulches in such water-saving environments further increased the economic returns. The maximized economic returns by using straw mulch in water-saving rice production systems definitely have pragmatic implications for sustainable agriculture.

Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice

PubMed Central

Ayano, Madoka; Kani, Takahiro; Kojima, Mikiko; Sakakibara, Hitoshi; Kitaoka, Takuya; Kuroha, Takeshi; Angeles-Shim, Rosalyn B; Kitano, Hidemi; Nagai, Keisuke; Ashikari, Motoyuki

2014-01-01

Under flooded conditions, the leaves and internodes of deepwater rice can elongate above the water surface to capture oxygen and prevent drowning. Our previous studies showed that three major quantitative trait loci (QTL) regulate deepwater-dependent internode elongation in deepwater rice. In this study, we investigated the age-dependent internode elongation in deepwater rice. We also investigated the relationship between deepwater-dependent internode elongation and the phytohormone gibberellin (GA) by physiological and genetic approach using a QTL pyramiding line (NIL-1 + 3 + 12). Deepwater rice did not show internode elongation before the sixth leaf stage under deepwater condition. Additionally, deepwater-dependent internode elongation occurred on the sixth and seventh internodes during the sixth leaf stage. These results indicate that deepwater rice could not start internode elongation until the sixth leaf stage. Ultra-performance liquid chromatography tandem mass-spectrometry (UPLC-MS/MS) method for the phytohormone contents showed a deepwater-dependent GA1 and GA4 accumulation in deepwater rice. Additionally, a GA inhibitor abolished deepwater-dependent internode elongation in deepwater rice. On the contrary, GA feeding mimicked internode elongation under ordinary growth conditions. However, mutations in GA biosynthesis and signal transduction genes blocked deepwater-dependent internode elongation. These data suggested that GA biosynthesis and signal transduction are essential for deepwater-dependent internode elongation in deepwater rice. Deepwater rice obtained the ability for rapid internode elongation to avoid drowning and adapt to flooded condition. How does it regulate internode elongation? Using both physiological and genetic approach, this paper shows that the plant hormone, gibberellin (GA) regulates internode elongation. PMID:24891164

Observation of methane fluxes using eddy covariance technique and relaxed eddy accumulation techniques simultaneously over rice paddies in Taiwan

NASA Astrophysics Data System (ADS)

Tang, M.; Tsai, J.; Tsuang, B.; Feng, P.; Kuo, P.

2012-12-01

In the past decades, more and more attention was given to the increase of atmospheric methane concentration from the scientific community. Methane is one of greenhouse gases with a global warming potential 21 times greater than carbon dioxide on a 100-year horizon. Rice paddy fields were considered as a major source for methane and so far there are few studies where the eddy covariance (EC) technique has been used to measure methane fluxes from rice paddy fields, especially in Asia. Therefore, in this study we used EC technique and relaxed eddy accumulation (REA) method simultaneously to observe the methane fluxes over rice paddy, fertilized with pig manure, in Taiwan from 22th February to 5th June in 2012. A suit of Micrometeorologial variables and water table depth were measured in conjunction with the fluxes. The results showed that the rice paddy field was source of methane during most of the study period and the observed methane fluxes ranged between - 0.5 and 13 μg m-2 s-1. and the maximum values usually occurred in the afternoon. A significant methane emission was observed in the first one and a half month after transplanting. Comparison of daily methane fluxes measured by EC and REA showed generally good agreement between both methods with a coefficient of determination of 0.81, although the magnitude of methane fluxes measured by REA were slightly lower than those by EC. During the continuous flooded period, the methane fluxes can be depicted well by a function of soil temperature with an exponential form. Sudden pulses of methane fluxes were observed when drained for the removal of obstruction which hindered the methane diffuse from the soil to the atmosphere. During fallow period between growth periods, the paddy fields was a sink of methane where the methane uptake was about 0.5μg m-2 s-1 around noon.

Effects of sulfur in flooded paddy soils: Implications for iron chemistry and arsenic mobilization

NASA Astrophysics Data System (ADS)

Avancha, S.; Boye, K.

2013-12-01

In the Mekong delta in Cambodia, naturally occurring arsenic (amplified by erosion in the Himalaya Mountains) in paddy soils is mobilized during the seasonal flooding. As a consequence, rice grown on the flooded soils may take up arsenic and expose people eating the rice to this carcinogenic substance. Iron and sulfur both interact strongly with arsenic in paddy soils: iron oxides are strong adsorbents for arsenic in oxic conditions, and sulfur (in the form of sulfide) is a strong adsorbent under anoxic conditions. In the process of reductive dissolution of iron oxides, arsenic, which had been adsorbed to the iron oxides, is released. Therefore, higher levels of reduced iron (ferrous iron) will likely correlate with higher levels of mobilized arsenic. However, the mobilized arsenic may then co-precipitate with or adsorb to iron sulfides, which form under sulfate-reducing conditions and with the aid of certain microbes already present in the soil. In a batch experiment, we investigated how these processes correlate and which has the greatest influence on arsenic mobilization and potential plant availability. The experiment was designed to measure the effects of various sources of sulfur (dried rice straw, charred rice straw, and gypsum) on the iron and arsenic release in an arsenic-contaminated paddy soil from Cambodia under flooded conditions. The two types of rice straw were designed to introduce the same amount of organic sulfur (7.7 μg/g of soil), but different levels of available carbon, since carbon stimulates microbial activity in the soil. In comparison, two different levels of gypsum (calcium sulfate) were used, 7.7 and 34.65 μg/g of soil, to test the effect of directly available inorganic sulfate without carbon addition. The soil was flooded with a buffer solution at pH 7.07 in airtight serum vials and kept as a slurry on a shaker at 25 °C. We measured pH, alkalinity, ferrous iron, ferric iron, sulfide, sulfate, total iron, sulfur, and arsenic in the aqueous phase on days 1, 3, 8, 15, 22, 29 and 38 from the start of the experiment.

Cascading effect of economic globalization on human risks of scrub typhus and tick-borne rickettsial diseases.

PubMed

Kuo, Chi-Chien; Huang, Jing-Lun; Shu, Pei-Yun; Lee, Pei-Lung; Kelt, Douglas A; Wang, Hsi-Chieh

2012-09-01

The increase in global travel and trade has facilitated the dissemination of disease vectors. Globalization can also indirectly affect vector-borne diseases through the liberalization of cross-border trade, which has far-reaching, worldwide effects on agricultural practices and may in turn influence vectors through the modification of the ecological landscape. While the cascading effect of economic globalization on vector-borne diseases, sometimes acting synergistically with regional agricultural policy, could be substantial and have significant economic, agricultural, and public health implications, research into this remains very limited. We evaluated how abandonment of rice paddies in Taiwan after joining the World Trade Organization, along with periodic plowing, an agricultural policy to reduce farm pests in abandoned fields can unexpectedly influence risks to diseases transmitted by ticks and chiggers (larval trombiculid mites), which we collected from their small-mammal hosts. Sampling was limited to abandoned (fallow) and plowed fields due to the challenge of trapping small mammals in flooded rice paddies. Striped field mice (Apodemus agrarius) are the main hosts for both vectors. They harbored six times more ticks and three times more chiggers in fallow than in plowed plots. The proportion of ticks infected with Rickettsia spp. (etiologic agent of spotted fever) was three times higher in fallow plots, while that of Orientia tsutsugamushi (scrub typhus) in chiggers was similar in both treatments. Fallow plots had more ground cover and higher vegetation than plowed ones. Moreover, ticks and chiggers in both field types were dominated by species known to infest humans. Because ticks and chiggers should exhibit very low survival in flooded rice paddies, we propose that farm abandonment in Taiwan, driven by globalization, may have inadvertently led to increased risks of spotted fever and scrub typhus. However, periodic plowing can unintentionally mitigate vector burdens. Economic globalization can have unexpected consequences on disease risk through modification of the agricultural landscape, but the outcome may also be influenced by agricultural policies, calling for further research on vector-borne diseases and their control from broader perspectives.

Impacts of Floods Events on Food Security

NASA Astrophysics Data System (ADS)

Caporali, E.; Pacetti, T.; Rulli, M. C.

2017-12-01

The analysis of the interactions among natural disasters and food security is particularly significant for developing countries where food availability (one of the four pillars of food security together with access, utilization and stability) can be highly jeopardize by extreme events that damage the primary access to food, i.e. the agriculture. The main objective of this study is to analyze the impact of flood events on food security for two disastrous flood events in Bangladesh on 2007 and in Pakistan on 2010, selected here as case studies based on the existing literature related to extreme floods.The adopted methodology integrates remote sensing data, agricultural statistics, and water footprint values in order to (i) evaluating the potentially affected agricultural areas; (ii) converting the affected areas into crop loss; (iii) estimating the associated calories and water footprint losses. In Bangladesh, the estimated lost rice is around 12.5% of the total potential production, which implies a 5.3% calories loss with respect to the total potential energy provided by rice and 4.4% of total WF associated to national food supply. In Pakistan, the results show a crops loss of 19% for sugarcane and 40% for rice, with a related calories loss of 8.5% and a WF loss of 13.5%.The results highlight the countries vulnerability to flood, being both countries strongly dependent on local agricultural production. The 2007 flood event reflected critically upon Bangladeshi food security, almost doubling the existing food deficit. The same happened in Pakistan where an already scarce food supply has been worsened by the 2010 flood.Method results are fully repeatable; whereas, for remote sensed data the sources of data are valid worldwide and the data regarding land use and crops characteristics are strongly site specific, which need to be carefully evaluated.These case studies stress the importance of integrating different analysis approaches to carry out an assessment of the meaningful connections between flood and food security and to enhance the resilience of territories.

Effects of water-saving irrigation practices and drought resistant rice variety on greenhouse gas emissions from a no-till paddy in the central lowlands of China.

PubMed

Xu, Ying; Ge, Junzhu; Tian, Shaoyang; Li, Shuya; Nguy-Robertson, Anthony L; Zhan, Ming; Cao, Cougui

2015-02-01

As pressure on water resources increases, alternative practices to conserve water in paddies have been developed. Few studies have simultaneously examined the effectiveness of different water regimes on conserving water, mitigating greenhouse gases (GHG), and maintaining yields in rice production. This study, which was conducted during the drought of 2013, examined all three factors using a split-plot experiment with two rice varieties in a no-till paddy managed under three different water regimes: 1) continuous flooding (CF), 2) flooded and wet intermittent irrigation (FWI), and 3) flooded and dry intermittent irrigation (FDI). The Methane (CH₄) and nitrous oxide (N₂O) emissions were measured using static chamber-gas measurements, and the carbon dioxide (CO₂) emissions were monitored using a soil CO₂ flux system (LI-8100). Compared with CF, FWI and FDI irrigation strategies reduced CH₄ emissions by 60% and 83%, respectively. In contrast, CO₂ and N₂O fluxes increased by 65% and 9%, respectively, under FWI watering regime and by 104% and 11%, respectively, under FDI managed plots. Although CO₂ and N₂O emissions increased, the global warming potential (GWP) and greenhouse gas intensity (GHGI) of all three GHG decreased by up to 25% and 29% (p<0.01), respectively, using water-saving irrigation strategies. The rice variety also affected yields and GHG emissions in response to different water regimes. The drought-resistance rice variety (HY3) was observed to maintain yields, conserve water, and reduce GHG under the FWI irrigation management compared with the typical variety (FYY299) planted in the region. The FYY299 only had significantly lower GWP and GHGI when the yield was reduced under FDI water regime. In conclusion, FWI irrigation strategy could be an effective option for simultaneously saving water and mitigating GWP without reducing rice yields using drought-resistant rice varieties, such as HY3. Copyright © 2014 Elsevier B.V. All rights reserved.

Wildlife values of North American ricelands

USGS Publications Warehouse

Eadie, J.M.; Elphick, C.S.; Reinecke, K.J.; Miller, M.R.; Manley, Scott W.

2008-01-01

Ricelands have become an indispensable component of waterbird habitat and a leading example of integrating agricultural and natural resource management in the Mississippi Alluvial Valley, Gulf Coast, and Central California. Residual rice, weed seeds, and invertebrates provide food for many avian species during fall and winter. In North America, considerable information exists on the use of ricefields by wintering waterbirds, the value of ricelands as breeding habitat for birds, and the effects of organic chemicals on birds that- feed in ricefields. Recent research has also examined the influence of field management practices, such as winter flooding and post-harvest straw manipulation, on the suitability of ricefields for wildlife. Whereas early studies focused on detrimental effects of wildlife on rice production (e.g., crop depredation), it has become apparent that waterbirds may benefit producers by enhancing straw decomposition, reducing weed and pest pressure, and providing additional income through hunting and wildlife viewing opportunities. A comprehensive evaluation of agronomic and environmental issues is needed to meet the challenges of producing food and sustaining wildlife in twenty-first-century rice lands. Changes in agricultural markets, pressures of increased urban development, conflicting needs for limited resources such as water, endangered species constraints, and concerns over water quality must be addressed in developing a sustainable, mutually beneficial partnership among the rice industry, wildlife, and environmental interests. Research is also needed to evaluate potential reductions in the wildlife carrying capacity of ricelands resulting from new harvest and field management techniques, crop conversion, or loss of rice acreage. Key uncertainties include: (1) changes in waste grain abundance and availability due to various harvest and post-harvest management practices; (2) evaluating food depletion by birds feeding in rice6elds and derermining threshold food levels required to maintain bird use; (3) quantifying use of ricefields by nonwaterfowl species throughout the year; and (4) determining the amount and distribution of rice habitat needed to meet objectives of the North American Waterfowl Management Plan and the United States Shorebird Conservation Plan.

Amendment damages the function of continuous flooding in decreasing Cd and Pb uptake by rice in acid paddy soil.

PubMed

Ye, Xinxin; Li, Hongying; Zhang, Ligan; Chai, Rushan; Tu, Renfeng; Gao, Hongjian

2018-01-01

Combinations of remediation technologies are needed to solve the problem of soil contamination in paddy rice, due to multiple potential toxic elements (PTEs). Two potential mitigation methods, water management and in-situ remediation by soil amendment, have been widely used in treatment of PTE-polluted paddy soil. However, the interactive relationship between soil amendment and water management, and its influence on the accumulation of PTEs in rice are poorly understood. Greenhouse pot experiments were conducted to examine the effects of phosphate amendment on Cd and Pb availability in soil and their influence on Cd and Pb uptake into rice, on Fe and P availability in soil, and on the alteration of Fe amount and compartment on root surface among different water management strategies. Results indicated that Cd and Pb content in the shoot and grain were significantly affected by the different water management strategies in nonamended soils, and followed the order: wetting irrigation > conventional irrigation > continuous flooding. The application of phosphate amendment significantly decreased the variations of Cd and Pb absorption in shoot and grain of rice among different water treatments. The reasons may be attributed to the enhancement of P availability and the decrease of Fe availability in soil, and the decreased variations of Fe 2+ /Fe 3+ content in root coating after the application of phosphate amendment. These results suggested that the simultaneous use of phosphate amendment and continuous flooding to immobilize Cd and Pb, especially in acid paddy soils, should be avoided. Copyright © 2017 Elsevier Inc. All rights reserved.

Reducing greenhouse gas emissions, water use and grain arsenic levels in rice systems

USDA-ARS?s Scientific Manuscript database

Agriculture is faced with the challenge of providing healthy food for a growing population while minimizing environmental consequences. Rice (Oryza sativa), the staple crop for the largest number of people on earth, is grown under flooded soil conditions and uses more water and has higher greenhous...

Converting Paddy Rice Field to Urban Use Dramatically Altered the Water and Energy Balances in Southern China

NASA Astrophysics Data System (ADS)

Hao, L.; Sun, G.; Liu, Y.; Qin, M.; Huang, X.; Fang, D.

2017-12-01

Paddy rice wetlands are the main land use type across southern China, which impact the regional environments by affecting evapotranspiration (ET) and other water and energy related processes. Our study focuses on the effects of land-cover change on water and energy processes in the Qinhuai River Basin, a typical subtropical humid region that is under rapid ecological and economical transformations. This study integrates multiple methods and techniques including remote sensing, water and energy balance model (i.e., Surface Energy Balance Algorithm for Land, SEBAL), ecohydrological model (i.e., Soil and Water Assessment Tool, SWAT), and ground observation (Eddy Covariance measurement, etc.). We found that conversion of paddy rice field to urban use led to rise in vapor pressure deficit (VPD) and reduction in ET, and thus resulted in changes in local and regional water and heat balance. The effects of the land-use change on ET and VPD overwhelmed the effects of regional climate warming and climate variability. We conclude that the ongoing large-scale urbanization of the rice paddy-dominated regions in humid southern China and East Asia will likely exacerbate environmental consequences (e.g., elevated storm-flow volume, aggravated flood risks, and intensified urban heat island and urban dry island effects). The potential role of vegetated land cover in moderating water and energy balances and maintaining a stable climate should be considered in massive urban planning and global change impact assessment in southern China.

Malaria resurgence risk in southern Europe: climate assessment in an historically endemic area of rice fields at the Mediterranean shore of Spain.

PubMed

Sainz-Elipe, Sandra; Latorre, Jose Manuel; Escosa, Raul; Masià, Montserrat; Fuentes, Marius Vicent; Mas-Coma, Santiago; Bargues, Maria Dolores

2010-07-31

International travel and immigration have been related with an increase of imported malaria cases. This fact and climate change, prolonging the period favouring vector development, require an analysis of the malaria transmission resurgence risk in areas of southern Europe. Such a study is made for the first time in Spain. The Ebro Delta historically endemic area was selected due to its rice field landscape, the presence of only one vector, Anopheles atroparvus, with densities similar to those it presented when malaria was present, in a situation which pronouncedly differs from already assessed potential resurgence areas in other Mediterranean countries, such as France and Italy, where many different Anopheles species coexist and a different vector species dominates. The transmission risk was assessed analysing: 1) climate diagrams including the minimum temperature for Plasmodium falciparum and Plasmodium vivax development; 2) monthly evolution of the Gradient Model Risk (GMR) index, specifying transmission risk period and number of potential Plasmodium generations; 3) ecological characteristics using remote sensing images with the Eurasia Land Cover characteristics database and the monthly evolution of the Normalized Difference Vegetation Index (NDVI); 4) evaluation of A. atroparvus population dynamics. Climatological analyses and GMR index show that a transmission risk presently exists, lasting from May until September for P. falciparum, and from May until October for P. vivax. The GMR index shows that the temperature increase does not actually mean a transmission risk increase if accompanied by a precipitation decrease reducing the number of parasite generations and transmission period. Nevertheless, this limitation is offset by the artificial flooding of the rice fields. Maximum NDVI values and A. atroparvus maximum abundance correspond to months with maximum growth of the rice fields. The Ebro Delta presents the ecological characteristics that favour transmission. The temperature increase has favoured a widening of the monthly potential transmission window with respect to when malaria was endemic. The combined application of modified climate diagrams and GMR index, together with spatial characterization conforms a useful tool for assessing potential areas at risk of malaria resurgence. NDVI is a good marker when dealing with a rice field area.

Malaria resurgence risk in southern Europe: climate assessment in an historically endemic area of rice fields at the Mediterranean shore of Spain

PubMed Central

2010-01-01

Background International travel and immigration have been related with an increase of imported malaria cases. This fact and climate change, prolonging the period favouring vector development, require an analysis of the malaria transmission resurgence risk in areas of southern Europe. Such a study is made for the first time in Spain. The Ebro Delta historically endemic area was selected due to its rice field landscape, the presence of only one vector, Anopheles atroparvus, with densities similar to those it presented when malaria was present, in a situation which pronouncedly differs from already assessed potential resurgence areas in other Mediterranean countries, such as France and Italy, where many different Anopheles species coexist and a different vector species dominates. Methods The transmission risk was assessed analysing: 1) climate diagrams including the minimum temperature for Plasmodium falciparum and Plasmodium vivax development; 2) monthly evolution of the Gradient Model Risk (GMR) index, specifying transmission risk period and number of potential Plasmodium generations; 3) ecological characteristics using remote sensing images with the Eurasia Land Cover characteristics database and the monthly evolution of the Normalized Difference Vegetation Index (NDVI); 4) evaluation of A. atroparvus population dynamics. Results Climatological analyses and GMR index show that a transmission risk presently exists, lasting from May until September for P. falciparum, and from May until October for P. vivax. The GMR index shows that the temperature increase does not actually mean a transmission risk increase if accompanied by a precipitation decrease reducing the number of parasite generations and transmission period. Nevertheless, this limitation is offset by the artificial flooding of the rice fields. Maximum NDVI values and A. atroparvus maximum abundance correspond to months with maximum growth of the rice fields. Conclusions The Ebro Delta presents the ecological characteristics that favour transmission. The temperature increase has favoured a widening of the monthly potential transmission window with respect to when malaria was endemic. The combined application of modified climate diagrams and GMR index, together with spatial characterization conforms a useful tool for assessing potential areas at risk of malaria resurgence. NDVI is a good marker when dealing with a rice field area. PMID:20673367

Participatory evaluation guides the development and selection of farmers' preferred rice varieties for salt- and flood-affected coastal deltas of South and Southeast Asia.

PubMed

Burman, D; Maji, B; Singh, Sudhanshu; Mandal, Subhasis; Sarangi, Sukanta K; Bandyopadhyay, B K; Bal, A R; Sharma, D K; Krishnamurthy, S L; Singh, H N; delosReyes, A S; Villanueva, D; Paris, T; Singh, U S; Haefele, S M; Ismail, Abdelbagi M

2018-05-01

Rice is the staple food and provides livelihood for smallholder farmers in the coastal delta regions of South and Southeast Asia. However, its productivity is often low because of several abiotic stresses including high soil salinity and waterlogging during the wet (monsoon) season and high soil and water salinity during the dry season. Development and dissemination of suitable rice varieties tolerant of these multiple stresses encountered in coastal zones are of prime importance for increasing and stabilizing rice productivity, however adoption of new varieties has been slow in this region. Here we implemented participatory varietal selection (PVS) processes to identify and understand smallholder farmers' criteria for selection and adoption of new rice varieties in coastal zones. New breeding lines together with released rice varieties were evaluated in on-station and on-farm trials (researcher-managed) during the wet and dry seasons of 2008-2014 in the Indian Sundarbans region. Significant correlations between preferences of male and female farmers in most trials indicated that both groups have similar criteria for selection of rice varieties. However, farmers' preference criteria were different from researchers' criteria. Grain yield was important, but not the sole reason for variety selection by farmers. Several other factors also governed preferences and were strikingly different when compared across wet and dry seasons. For the wet season, farmers preferred tall (140-170 cm), long duration (160-170 d), lodging resistant and high yielding rice varieties because these traits are required in lowlands where water stagnates in the field for about four months (July to October). For the dry season, farmers' preferences were for high yielding, salt tolerant, early maturing (115-130 d) varieties with long slender grains and good quality for better market value. Pest and disease resistance was important in both seasons but did not rank high. When farmers ranked the two most preferred varieties, the ranking order was sometimes variable between locations and years, but when the top four varieties that consistently ranked high were considered, the variability was low. This indicates that at least 3-4 of the best-performing entries should be considered in succeeding multi-location and multi-year trials, thereby increasing the chances that the most stable varieties are selected. These findings will help improve breeding programs by providing information on critical traits. Selected varieties through PVS are also more likely to be adopted by farmers and will ensure higher and more stable productivity in the salt- and flood-affected coastal deltas of South and Southeast Asia.

Prediction of future methane emission from irrigated rice paddies in central Thailand under different water management practices.

PubMed

Minamikawa, Kazunori; Fumoto, Tamon; Iizumi, Toshichika; Cha-Un, Nittaya; Pimple, Uday; Nishimori, Motoki; Ishigooka, Yasushi; Kuwagata, Tsuneo

2016-10-01

There is concern about positive feedbacks between climate change and methane (CH4) emission from rice paddies. However, appropriate water management may mitigate the problem. We tested this hypothesis at six field sites in central Thailand, where the irrigated area is rapidly increasing. We used DNDC-Rice, a process-based biogeochemistry model adjusted based on rice growth data at each site to simulate CH4 emission from a rice-rice double cropping system from 2001 to 2060. Future climate change scenarios consisting of four representative concentration pathways (RCPs) and seven global climate models were generated by statistical downscaling. We then simulated CH4 emission in three water management practices: continuous flooding (CF), single aeration (SA), and multiple aeration (MA). The adjusted model reproduced the observed rice yield and CH4 emission well at each site. The simulated CH4 emissions in CF from 2051 to 2060 were 5.3 to 7.8%, 9.6 to 16.0%, 7.3 to 18.0%, and 13.6 to 19.0% higher than those from 2001 to 2010 in RCPs 2.6, 4.5, 6.0, and 8.5, respectively, at the six sites. Regionally, SA and MA mitigated CH4 emission by 21.9 to 22.9% and 53.5 to 55.2%, respectively, relative to CF among the four RCPs. These mitigation potentials by SA and MA were comparable to those from 2001 to 2010. Our results indicate that climate change in the next several decades will not attenuate the quantitative effect of water management practices on mitigating CH4 emission from irrigated rice paddies in central Thailand. Copyright © 2016 Elsevier B.V. All rights reserved.

Agricultural peatland restoration: effects of land-use change on greenhouse gas (CO2 and CH4) fluxes in the Sacramento-San Joaquin Delta.

PubMed

Knox, Sara Helen; Sturtevant, Cove; Matthes, Jaclyn Hatala; Koteen, Laurie; Verfaillie, Joseph; Baldocchi, Dennis

2015-02-01

Agricultural drainage of organic soils has resulted in vast soil subsidence and contributed to increased atmospheric carbon dioxide (CO2) concentrations. The Sacramento-San Joaquin Delta in California was drained over a century ago for agriculture and human settlement and has since experienced subsidence rates that are among the highest in the world. It is recognized that drained agriculture in the Delta is unsustainable in the long-term, and to help reverse subsidence and capture carbon (C) there is an interest in restoring drained agricultural land-use types to flooded conditions. However, flooding may increase methane (CH4) emissions. We conducted a full year of simultaneous eddy covariance measurements at two conventional drained agricultural peatlands (a pasture and a corn field) and three flooded land-use types (a rice paddy and two restored wetlands) to assess the impact of drained to flooded land-use change on CO2 and CH4 fluxes in the Delta. We found that the drained sites were net C and greenhouse gas (GHG) sources, releasing up to 341 g C m(-2) yr(-1) as CO2 and 11.4 g C m(-2) yr(-1) as CH4. Conversely, the restored wetlands were net sinks of atmospheric CO2, sequestering up to 397 g C m(-2) yr(-1). However, they were large sources of CH4, with emissions ranging from 39 to 53 g C m(-2) yr(-1). In terms of the full GHG budget, the restored wetlands could be either GHG sources or sinks. Although the rice paddy was a small atmospheric CO2 sink, when considering harvest and CH4 emissions, it acted as both a C and GHG source. Annual photosynthesis was similar between sites, but flooding at the restored sites inhibited ecosystem respiration, making them net CO2 sinks. This study suggests that converting drained agricultural peat soils to flooded land-use types can help reduce or reverse soil subsidence and reduce GHG emissions. © 2014 John Wiley & Sons Ltd.

Foliar uptake of radiocaesium from irrigation water by paddy rice (Oryza sativa): an overlooked pathway in contaminated environments.

PubMed

Uematsu, Shinichiro; Vandenhove, Hildegarde; Sweeck, Lieve; Hees, May Van; Wannijn, Jean; Smolders, Erik

2017-04-01

Flooded (paddy) rice (Oryza sativa) can take up ions from the irrigation water by foliar uptake via the exposed stem base. We hypothesised that the stem base uptake of radiocaesium (RCs) is a pathway for rice grown in RCs-contaminated environments. We developed a bi-compartmental device which discriminates the stem base from root RCs uptake from solutions, thereby using RCs isotopes ( 137 Cs and 134 Cs) with < 2% solution leak between the compartments. Radiocaesium uptake was linear over time (0-24 h). Radiocaesium uptake to the entire plant, expressed per dry weight of the exposed parts, was sixfold higher for the roots than for the exposed stem base. At equal RCs concentrations in both compartments, the exposed stem base and root uptake contributed almost equally to the total shoot RCs concentrations. Reducing potassium supply to the roots not only increased the root RCs uptake but also increased RCs uptake by the stem base. This study was the first to experimentally demonstrate active and internally regulated RCs uptake by the stem base of rice. Scenario calculations for the Fukushima-affected area predict that RCs in irrigation water could be an important source of RCs in rice as indirectly suggested from field data. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Lower responsiveness of canopy evapotranspiration rate than of leaf stomatal conductance to open-air CO2 elevation in rice.

PubMed

Shimono, Hiroyuki; Nakamura, Hirofumi; Hasegawa, Toshihiro; Okada, Masumi

2013-08-01

An elevated atmospheric CO2 concentration ([CO2 ]) can reduce stomatal conductance of leaves for most plant species, including rice (Oryza sativa L.). However, few studies have quantified seasonal changes in the effects of elevated [CO2 ] on canopy evapotranspiration, which integrates the response of stomatal conductance of individual leaves with other responses, such as leaf area expansion, changes in leaf surface temperature, and changes in developmental stages, in field conditions. We conducted a field experiment to measure seasonal changes in stomatal conductance of the uppermost leaves and in the evapotranspiration, transpiration, and evaporation rates using a lysimeter method. The study was conducted for flooded rice under open-air CO2 elevation. Stomatal conductance decreased by 27% under elevated [CO2 ], averaged throughout the growing season, and evapotranspiration decreased by an average of 5% during the same period. The decrease in daily evapotranspiration caused by elevated [CO2 ] was more significantly correlated with air temperature and leaf area index (LAI) rather than with other parameters of solar radiation, days after transplanting, vapor-pressure deficit and FAO reference evapotranspiration. This indicates that higher air temperatures, within the range from 16 to 27 °C, and a larger LAI, within the range from 0 to 4 m(2)  m(-2) , can increase the magnitude of the decrease in evapotranspiration rate caused by elevated [CO2 ]. The crop coefficient (i.e. the evapotranspiration rate divided by the FAO reference evapotranspiration rate) was 1.24 at ambient [CO2 ] and 1.17 at elevated [CO2 ]. This study provides the first direct measurement of the effects of elevated [CO2 ] on rice canopy evapotranspiration under open-air conditions using the lysimeter method, and the results will improve future predictions of water use in rice fields. © 2013 John Wiley & Sons Ltd.

Expected irrigation reductions using multiple-inlet rice irrigation under rainfall conditions in the lower Mississippi River Valley.

USDA-ARS?s Scientific Manuscript database

A model was developed to compare irrigation applications made using single-inlet and multiple-inlet rice flood distribution practices commonly used in the Lower Mississippi River Valley. The model was used to determine potential irrigation reductions under a wide range of natural rainfall amounts an...

Assessing fertilizer N placement on CH4 and N2O emissions in irrigated rice systems

USDA-ARS?s Scientific Manuscript database

Improved N fertilizer management practices can increase rice yields and mitigate global warming potential (GWP). While banding N has been shown to have positive effects on yield and nitrogen use efficiency (NUE), there is little information in how it affects greenhouse gas (GHG) emissions from flood...

Uptake of aromatic arsenicals from soil contaminated with diphenylarsinic acid by rice.

PubMed

Arao, Tomohito; Maejima, Yuji; Baba, Koji

2009-02-15

Chemical warfare agents containing aromatic arsenicals (AAs) such as Clark I (diphenylchloroarsine) are well-known, as is the risk of leakage from such munitions into the environment. We investigated the uptake of AAs in agricultural soils by rice. Methylphenylarsinic acid (MPAA) was detected in brown rice grown in contaminated soil. Dimethylphenylarsine oxide (DMPAO) and methyldiphenylarsine oxide (MDPAO) were detected in the straw but not in the grains grown in the contaminated soil. Inthe contaminated soil, phenylarsonic acid (PAA) and MPAA concentrations decreased and DMPAO concentration increased under the flooded conditions; however, their concentrations remained unchanged underthe upland conditions. DMPAO was detected in the straw of the rice grown in PAA- or MPAA-amended soil but was not detected in that grown in a PAA- or MPAA-added solution culture. MDPAO was detected in the straw of the rice grown in diphenylarsinic acid (DPAA)-amended soil but was not detected in that grown in a DPAA-added solution culture. Thus, MPAA and DPAA were methylated not in the rice plant but in the soil under the flooded conditions. Dephenylated products were detected in the straw grown in AA-added solution cultures, but demethylated products were not detected. DMPAO and MDPAO absorbed by the shoots were retained, and MPAA and DPAA absorbed by the shoots were translocated to the grains more easily than other AAs.

Studies on Schistosoma japonicum infection in the Philippines*

PubMed Central

Pesigan, T. P.; Farooq, M.; Hairston, N. G.; Jauregui, J. J.; Garcia, E. G.; Santos, A. T.; Santos, B. C.; Besa, A. A.

1958-01-01

Among the measures used in attempts to control the snail host of S. japonicum in Leyte Province, Philippines, where the terrain is unsuited to the application of molluscicides, have been removal of vegetation in and around infested streams, drainage of water-logged areas, filling low-lying areas with earth or flooding them, and digging fishponds in sluggish streams. Each of these measures is described in detail. Experiments carried out in rice-fields, which harbour great numbers of snails, have shown that improvements in rice-growing methods will not only markedly reduce the snail population but also double the rice yield. A campaign to promote the use of pit latrines encountered the serious difficulty that such latrines were not acceptable to the people. However, there is evidence that use of pit latrines does bring about a reduction in snail infection rates. No single control measure is recommended for all snail habitats, the choice of method depending on local circumstances; in many areas a combination of methods proved advantageous. It is felt that mass treatment of infected persons would not be fully effective until transmission is more thoroughly under control. PMID:13585073

Organic matter-solid phase interactions are critical for predicting arsenic release and plant uptake in Bangladesh paddy soils.

PubMed

Williams, Paul N; Zhang, Hao; Davison, William; Meharg, Andrew A; Hossain, Mahmud; Norton, Gareth J; Brammer, Hugh; Islam, M Rafiqul

2011-07-15

Agroecological zones within Bangladesh with low levels of arsenic in groundwater and soils produce rice that is high in arsenic with respect to other producing regions of the globe. Little is known about arsenic cycling in these soils and the labile fractions relevant for plant uptake when flooded. Soil porewater dynamics of field soils (n = 39) were recreated under standardized laboratory conditions to investigate the mobility and interplay of arsenic, Fe, Si, C, and other elements, in relation to rice grain element composition, using the dynamic sampling technique diffusive gradients in thin films (DGT). Based on a simple model using only labile DGT measured arsenic and dissolved organic carbon (DOC), concentrations of arsenic in Aman (Monsoon season) rice grain were predicted reliably. DOC was the strongest determinant of arsenic solid-solution phase partitioning, while arsenic release to the soil porewater was shown to be decoupled from that of Fe. This study demonstrates the dual importance of organic matter (OM), in terms of enhancing arsenic release from soils, while reducing bioavailability by sequestering arsenic in solution.

On the performance of surface renewal analysis to estimate sensible heat flux over two growing rice fields under the influence of regional advection

NASA Astrophysics Data System (ADS)

Castellví, F.; Snyder, R. L.

2009-09-01

SummaryHigh-frequency temperature data were recorded at one height and they were used in Surface Renewal (SR) analysis to estimate sensible heat flux during the full growing season of two rice fields located north-northeast of Colusa, CA (in the Sacramento Valley). One of the fields was seeded into a flooded paddy and the other was drill seeded before flooding. To minimize fetch requirements, the measurement height was selected to be close to the maximum expected canopy height. The roughness sub-layer depth was estimated to discriminate if the temperature data came from the inertial or roughness sub-layer. The equation to estimate the roughness sub-layer depth was derived by combining simple mixing-length theory, mixing-layer analogy, equations to account for stable atmospheric surface layer conditions, and semi-empirical canopy-architecture relationships. The potential for SR analysis as a method that operates in the full surface boundary layer was tested using data collected over growing vegetation at a site influenced by regional advection of sensible heat flux. The inputs used to estimate the sensible heat fluxes included air temperature sampled at 10 Hz, the mean and variance of the horizontal wind speed, the canopy height, and the plant area index for a given intermediate height of the canopy. Regardless of the stability conditions and measurement height above the canopy, sensible heat flux estimates using SR analysis gave results that were similar to those measured with the eddy covariance method. Under unstable cases, it was shown that the performance was sensitive to estimation of the roughness sub-layer depth. However, an expression was provided to select the crucial scale required for its estimation.

Influence of Environmental Factors, Cultural Practices, and Herbicide Application on Seed Germination and Emergence Ecology of Ischaemum rugosum Salisb.

PubMed

Lim, Charlemagne Alexander A; Awan, Tahir Hussain; Sta Cruz, Pompe C; Chauhan, Bhagirath Singh

2015-01-01

Ischaemum rugosum Salisb. (Saramolla grass) is a noxious weed of rice that is difficult to control by chemical or mechanical means once established. A study was conducted to determine the effect of light, temperature, salt, drought, flooding, rice residue mulch, burial depth, and pre-emergence herbicides on seed germination and emergence of I. rugosum. Germination was stimulated by light and inhibited under complete darkness. Optimum temperature for germination was 30/20°C (97.5% germination). Germination reduced from 31 to 3.5% when the osmotic potential of the growing medium decreased from -0.1 to -0.6 MPa and no germination occurred at -0.8 MPa. Germination was 18 and 0.5% at 50 and 100 mM NaCl concentrations, respectively, but was completely inhibited at 150 mM or higher. Residue application at 1-6 t ha-1 reduced weed emergence by 35-88% and shoot biomass by 55-95%. The efficacy of pre-emergence herbicides increased with increasing application rates and decreased with increasing rice residue mulching. The efficacy of herbicides was in the order of oxadiazon> pendimethalin> pretilachlor. At 6 t ha-1, all herbicides, regardless of rates, did not differ from the control treatment. I. rugosum seeds buried at 2 cm or deeper did not emerge; however, they emerged by 4.5 and 0.5% at 0.5 and 1 cm depths, respectively, compared to the 39% germination for soil surface seeding. Flooding at 4 DAS or earlier reduced seedling emergence and shoot biomass while flooding at 8 DAS reduced only seedling emergence. The depth and timing of flooding independently reduced root biomass. Flooding at 4 and 6 cm depths reduced the root biomass. Relative to flooding on the day of sowing, flooding at 8 DAS increased root biomass by 89%. Similarly, flooding on the day of sowing and at 2 DAS reduced the root-shoot biomass ratio. Under the no-flood treatment, increasing rates of pretilachlor from 0.075 to 0.3 kg ai ha-1 reduced weed emergence by 61-79%. At the flooding depth of 2-4 cm, pretilachlor reduced weed emergence and shoot and root biomass, but the differences across rates were non-significant. Information generated in this study will be helpful in developing integrated weed management strategies for managing this weed.

Geochemical Transformation of Cadmium (Cd) from Creek to Paddy Fields in W Thailand

NASA Astrophysics Data System (ADS)

Kosolsaksakul, Peerapat; Graham, Margaret; Farmer, John

2013-04-01

Extensive Cd contamination of paddy soils in Tak Province, western Thailand, a consequence of Zn mining activities, was first established in 2005 and medical studies showed that the health of local communities was being impaired. Mae Tao, Tak Province, comprising many paddy fields and irrigation canals, has been selected for this study of the geochemical transformation of Cd from the contamination source in the mountainous region to the east of the study site through the community irrigation system to the paddy soils. The aim of this research is to (i) investigate the geochemical transformation of Cd as it is transported from the main irrigation creek through the canals and to the paddy fields, (ii) assess the availability of Cd to rice plants, which may be affected by both chemical and physical factors, and (iii) trial some practical treatments to minimise Cd concentrations in rice grains. Soils, irrigation canal sediments and water samples were collected during the dry season and at the onset of the rainy season. Rice samples were collected at harvesting time and samples of soil fertiliser were also obtained. Water samples were filtered, ultrafiltered and analysed by ICP-MS whilst sub-samples of dried, ground soils and sediments were first subjected to micro-wave assisted acid digestion (modified US EPA method 3052). XRD and SEM-EDX methods were used for mineralogical characterisation and selective chemical extractions have assisted in the characterisation of solid phase Cd associations. Soil Cd concentrations were in the range 2.5-87.6 µg g-1, with higher values being obtained for fields furthest from the main creek. Although current irrigation water Cd inputs are low (mean 1.9 μg L-1; flood period), high loads of suspended particles still contribute additional Cd (4.2-9.8 µg L-1) to the paddy fields. For bioavailability assessment by a 3-step BCR sequential extraction, 70-90% Cd was in the exchangeable; HOAc-extractable fraction. That indicated that most of the Cd was in water soluble, exchangeable and carbonate-bound forms. For the fields with highest Cd concentration, SEM-EDX analysis identified two forms of Cd, i.e. Cd-Clay and Cd-CaCO3, in good agreement with the sequential extraction data. The predominance of easily extractable forms in the paddy field soils suggests that Cd may be readily absorbed by the rice plants. After harvesting, the Cd concentration in rice grains ranged from 0.05-4.0 µg g-1 and the concentration trends across the group of 18 fields matched well with the soil Cd data. Rice from nine out of the 18 fields contained Cd at greater than the safe level of 0.4 µg g-1.

Emission of Carbon Dioxide Influenced by Different Water Levels from Soil Incubated Organic Residues

PubMed Central

Hossain, M. B.; Puteh, A. B.

2013-01-01

We studied the influence of different organic residues and water levels on decomposition rate and carbon sequestration in soil. Organic residues (rice straw, rice root, cow dung, and poultry litter) including control were tested under moistened and flooding systems. An experiment was laid out as a complete randomized design at 25°C for 120 days. Higher CO2-C (265.45 mg) emission was observed in moistened condition than in flooding condition from 7 to 120 days. Among the organic residues, poultry litter produced the highest CO2-C emission. Poultry litter with soil mixture increased 121% cumulative CO2-C compared to control. On average, about 38% of added poultry litter C was mineralized to CO2-C. Maximum CO2-C was found in 7 days after incubation and thereafter CO2-C emission was decreased with the increase of time. Control produced the lowest CO2-C (158.23 mg). Poultry litter produced maximum cumulative CO2-C (349.91 mg). Maximum organic carbon was obtained in cow dung which followed by other organic residues. Organic residues along with flooding condition decreased cumulative CO2-C, k value and increased organic C in soil. Maximum k value was found in poultry litter and control. Incorpored rice straw increased organic carbon and decreased k value (0.003 g d−1) in soil. In conclusion, rice straw and poultry litter were suitable for improving soil carbon. PMID:24163626

Chlorella vulgaris and Pseudomonas putida interaction modulates phosphate trafficking for reduced arsenic uptake in rice (Oryza sativa L.).

PubMed

Srivastava, Suchi; Srivastava, Sonal; Bist, Vidisha; Awasthi, Surabhi; Chauhan, Reshu; Chaudhry, Vasvi; Singh, Poonam C; Dwivedi, Sanjay; Niranjan, Abhishek; Agrawal, Lalit; Chauhan, Puneet Singh; Tripathi, Rudra Deo; Nautiyal, Chandra Shekhar

2018-06-05

Rice grown in arsenic (As) contaminated areas contributes to high dietary exposure of As inducing multiple adverse effects on human health. The As contamination and application of phosphate fertilizers during seedling stage creates a high P and As stress condition. The flooded paddy fields are also conducive for algal growth and microbial activity. The present study proposes potential role of microalgae, Chlorella vulgaris (CHL) and bacteria, Pseudomonas putida (RAR) on rice plant grown under excess As and phosphate (P) conditions. The results show synchronized interaction of CHL + RAR which, reduces As uptake through enhanced P:As and reduced As:biomass ratio by modulating P trafficking. Gene expression analysis of different phosphate transporters exhibited correlation with reduced As uptake and other essential metals. The balancing of reactive oxygen species (ROS), proline accumulation, hormone modulation, and As sequestration in microbial biomass were elucidated as possible mechanisms of As detoxification. The study concludes that RAR and CHL combination mitigates the As stress during P-enriched conditions in rice by: (i) reducing As availability, (ii) modulating the As uptake, and (iii) improving detoxification mechanism of the plant. The study will be important in assessing the role and applicability of P solubilizing biofertilizers in these conditions. Copyright © 2018 Elsevier B.V. All rights reserved.

Effects of nitrogen application rates on net annual global warming potential and greenhouse gas intensity in double-rice cropping systems of the Southern China.

PubMed

Chen, Zhongdu; Chen, Fu; Zhang, Hailin; Liu, Shengli

2016-12-01

The net global warming potential (NGWP) and net greenhouse gas intensity (NGHGI) of double-rice cropping systems are not well documented. We measured the NGWP and NGHGI including soil organic carbon (SOC) change and indirect emissions (IE) from double-crop rice fields with fertilizing systems in Southern China. These experiments with three different nitrogen (N) application rates since 2012 are as follows: 165 kgN ha -1 for early rice and 225 kgN ha -1 for late rice (N1), which was the local N application rates as the control; 135 kgN ha -1 for early rice and 180 kgN ha -1 for late rice (N2, 20 % reduction); and 105 kgN ha -1 for early rice and 135 kgN ha -1 for late rice (N3, 40 % reduction). Results showed that yields increased with the increase of N application rate, but without significant difference between N1 and N2 plots. Annual SOC sequestration rate under N1 was estimated to be 1.15 MgC ha -1  year -1 , which was higher than those under other fertilizing systems. Higher N application tended to increase CH 4 emissions during the flooded rice season and significantly increased N 2 O emissions from drained soils during the nonrice season, ranking as N1 > N2 > N3 with significant difference (P < 0.05). Two-year average IE has a huge contribution to GHG emissions mainly coming from the higher N inputs in the double-rice cropping system. Reducing N fertilizer usage can effectively decrease the NGWP and NGHGI in the double-rice cropping system, with the lowest NGHGI obtained in the N2 plot (0.99 kg CO 2 -eq kg -1 yield year -1 ). The results suggested that agricultural economic viability and GHG mitigation can be simultaneously achieved by properly reducing N fertilizer application in double-rice cropping systems.

Integrating Water Supply Constraints into Irrigated Agricultural Simulations of California

NASA Technical Reports Server (NTRS)

Winter, Jonathan M.; Young, Charles A.; Mehta, Vishal K.; Ruane, Alex C.; Azarderakhsh, Marzieh; Davitt, Aaron; McDonald, Kyle; Haden, Van R.; Rosenzweig, Cynthia E.

2017-01-01

Simulations of irrigated croplands generally lack key interactions between water demand from plants and water supply from irrigation systems. We coupled the Water Evaluation and Planning system (WEAP) and Decision Support System for Agrotechnology Transfer (DSSAT) to link regional water supplies and management with field-level water demand and crop growth. WEAP-DSSAT was deployed and evaluated over Yolo County in California for corn, rice, and wheat. WEAP-DSSAT is able to reproduce the results of DSSAT under well-watered conditions and reasonably simulate observed mean yields, but has difficulty capturing yield interannual variability. Constraining irrigation supply to surface water alone reduces yields for all three crops during the 1987-1992 drought. Corn yields are reduced proportionally with water allocation, rice yield reductions are more binary based on sufficient water for flooding, and wheat yields are least sensitive to irrigation constraints as winter wheat is grown during the wet season.

Detection and assessment of flood susceptible irrigation networks in Licab, Nueva Ecija, Philippines using LiDAR DTM

NASA Astrophysics Data System (ADS)

Alberto, R. T.; Hernando, P. J. C.; Tagaca, R. C.; Celestino, A. B.; Palado, G. C.; Camaso, E. E.; Damian, G. B.

2017-09-01

Climate change has wide-ranging effects on the environment and socio-economic and related sectors which includes water resources, agriculture and food security, human health, terrestrial ecosystems, coastal zones and biodiversity. Farmers are under pressure to the changing weather and increasing unpredictable water supply. Because of rainfall deficiencies, artificial application of water has been made through irrigation. Irrigation is a basic determinant of agriculture because its inadequacies are the most powerful constraints on the increase of agricultural production. Irrigation networks are permanent and temporary conduits that supply water to agricultural areas from an irrigation source. Detection of irrigation networks using LiDAR DTM, and flood susceptible assessment of irrigation networks could give baseline information on the development and management of sustainable agriculture. Map Gully Depth (MGD) in Whitebox GAT was used to generate the potential irrigation networks. The extracted MGD was overlaid in ArcGIS as guide in the digitization of potential irrigation networks. A flood hazard map was also used to identify the flood susceptible irrigation networks in the study area. The study was assessed through field validation of points which were generated using random sampling method. Results of the study showed that most of the detected irrigation networks have low to moderate susceptibility to flooding while the rest have high susceptibility to flooding which is due to shifting weather. These irrigation networks may cause flood when it overflows that could also bring huge damage to rice and other agricultural areas.

Metabolic Responses to Arsenic in Rice Seedlings that Differed in Grain Arsenite Concentration

USDA-ARS?s Scientific Manuscript database

Arsenic (As) occurs naturally in air, water and soil and being ubiquitous in the environment, is also present in all edible and non-edible plant tissues. Because As becomes more available for plant uptake when soils are flooded, there is more concern about As in rice than other grain crops. Arseni...

Mitigation options for methane emissions from rice fields in the Philippines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lantin, R.S.; Buendia, L.V.; Wassmann, R.

1996-12-31

The contribution of Philippine rice production to global methane emission and breakthroughs in methane emission studies conducted in the country are presented in this paper. A significant impact in the reduction of GHG emissions from agriculture can be achieved if methane emissions from ricefields can be abated. This study presents the contribution of Philippine rice cultivation to global methane emission and breakthroughs in methane emission studies in the country which address the issue of mitigation. Using the derived emission factors from local measurements, rice cultivation contributes 566.6 Gg of methane emission in the Philippines. This value is 62% of themore » total methane emitted from the agriculture sector. The emission factors employed which are 78% of the IPCC value for irrigated rice and 95% for rainfed rice were derived from measurements with an automatic system taken during the growth duration in the respective ecosystems. Plots drained for 2 weeks at midtillering and before harvest gave a significant reduction in methane emission as opposed to continuously flooded plots and plots drained before harvest. The cultivar Magat reduced methane emission by 50% as compared to the check variety IR72. The application of ammonium sulfate instead of urea reduced methane emission by 10% to 34%. Addition of 6 t ha{sup {minus}1} phosphogypsum in combination with urea reduced emission by 74% as opposed to plots applied with urea alone. It is also from the results of such measurements that abatement strategies are based as regards to modifying treatments such as water management, fertilization, and choice of rice variety. It is not easy to identify and recommend mitigation strategies that will fit a particular cropping system. However, the identified mitigation options provide focus for the abatement of methane emission from ricefields.« less

Flood Risk and Probabilistic Benefit Assessment to Support Management of Flood-Prone Lands: Evidence From Candaba Floodplains, Philippines

NASA Astrophysics Data System (ADS)

Juarez, A. M.; Kibler, K. M.; Sayama, T.; Ohara, M.

2016-12-01

Flood management decision-making is often supported by risk assessment, which may overlook the role of coping capacity and the potential benefits derived from direct use of flood-prone land. Alternatively, risk-benefit analysis can support floodplain management to yield maximum socio-ecological benefits for the minimum flood risk. We evaluate flood risk-probabilistic benefit tradeoffs of livelihood practices compatible with direct human use of flood-prone land (agriculture/wild fisheries) and nature conservation (wild fisheries only) in Candaba, Philippines. Located north-west to Metro Manila, Candaba area is a multi-functional landscape that provides a temporally-variable mix of possible land uses, benefits and ecosystem services of local and regional value. To characterize inundation from 1.3- to 100-year recurrence intervals we couple frequency analysis with rainfall-runoff-inundation modelling and remotely-sensed data. By combining simulated probabilistic floods with both damage and benefit functions (e.g. fish capture and rice yield with flood intensity) we estimate potential damages and benefits over varying probabilistic flood hazards. We find that although direct human uses of flood-prone land are associated with damages, for all the investigated magnitudes of flood events with different frequencies, the probabilistic benefits ( 91 million) exceed risks by a large margin ( 33 million). Even considering risk, probabilistic livelihood benefits of direct human uses far exceed benefits provided by scenarios that exclude direct "risky" human uses (difference of 85 million). In addition, we find that individual coping strategies, such as adapting crop planting periods to the flood pulse or fishing rather than cultivating rice in the wet season, minimize flood losses ( 6 million) while allowing for valuable livelihood benefits ($ 125 million) in flood-prone land. Analysis of societal benefits and local capacities to cope with regular floods demonstrate the relevance of accounting for the full range of flood events and their relation to both potential damages and benefits in risk assessments. Management measures may thus be designed to reflect local contexts and support benefits of natural hydrologic processes, while minimizing flood damage.

Estimation of rice yield affected by drought and relation between rice yield and TVDI

NASA Astrophysics Data System (ADS)

Hongo, C.; Tamura, E.; Sigit, G.

2016-12-01

Impact of climate change is not only seen on food production but also on food security and sustainable development of society. Adaptation to climate change is a pressing issue throughout the world to reduce the risks along with the plans and strategies for food security and sustainable development. As a key adaptation to the climate change, agricultural insurance is expected to play an important role in stabilizing agricultural production through compensating the losses caused by the climate change. As the adaptation, the Government of Indonesia has launched agricultural insurance program for damage of rice by drought, flood and pest and disease. The Government started a pilot project in 2013 and this year the pilot project has been extended to 22 provinces. Having the above as background, we conducted research on development of new damage assessment method for rice using remote sensing data which could be used for evaluation of damage ratio caused by drought in West Java, Indonesia. For assessment of the damage ratio, estimation of rice yield is a key. As the result of our study, rice yield affected by drought in dry season could be estimated at level of 1 % significance using SPOT 7 data taken in 2015, and the validation result was 0.8t/ha. Then, the decrease ratio in rice yield about each individual paddy field was calculated using data of the estimated result and the average yield of the past 10 years. In addition, TVDI (Temperature Vegetation Dryness Index) which was calculated from Landsat8 data in heading season indicated the dryness in low yield area. The result suggests that rice yield was affected by irrigation water shortage around heading season as a result of the decreased precipitation by El Nino. Through our study, it becomes clear that the utilization of remote sensing data can be promising for assessment of the damage ratio of rice production precisely, quickly and quantitatively, and also it can be incorporated into the insurance procedures.

Genome-wide association study to identify candidate loci and genes for Mn toxicity tolerance in rice

PubMed Central

Shrestha, Asis; Dziwornu, Ambrose Kwaku; Ueda, Yoshiaki; Wu, Lin-Bo; Mathew, Boby

2018-01-01

Manganese (Mn) is an essential micro-nutrient for plants, but flooded rice fields can accumulate high levels of Mn2+ leading to Mn toxicity. Here, we present a genome-wide association study (GWAS) to identify candidate loci conferring Mn toxicity tolerance in rice (Oryza sativa L.). A diversity panel of 288 genotypes was grown in hydroponic solutions in a greenhouse under optimal and toxic Mn concentrations. We applied a Mn toxicity treatment (5 ppm Mn2+, 3 weeks) at twelve days after transplanting. Mn toxicity caused moderate damage in rice in terms of biomass loss and symptom formation despite extremely high shoot Mn concentrations ranging from 2.4 to 17.4 mg g-1. The tropical japonica subpopulation was more sensitive to Mn toxicity than other subpopulations. Leaf damage symptoms were significantly correlated with Mn uptake into shoots. Association mapping was conducted for seven traits using 416741 single nucleotide polymorphism (SNP) markers using a mixed linear model, and detected six significant associations for the traits shoot manganese concentration and relative shoot length. Candidate regions contained genes coding for a heavy metal transporter, peroxidase precursor and Mn2+ ion binding proteins. The significant marker SNP-2.22465867 caused an amino acid change in a gene (LOC_Os02g37170) with unknown function. This study demonstrated significant natural variation in rice for Mn toxicity tolerance and the possibility of using GWAS to unravel genetic factors responsible for such complex traits. PMID:29425206

Genome-wide association study to identify candidate loci and genes for Mn toxicity tolerance in rice.

PubMed

Shrestha, Asis; Dziwornu, Ambrose Kwaku; Ueda, Yoshiaki; Wu, Lin-Bo; Mathew, Boby; Frei, Michael

2018-01-01

Manganese (Mn) is an essential micro-nutrient for plants, but flooded rice fields can accumulate high levels of Mn2+ leading to Mn toxicity. Here, we present a genome-wide association study (GWAS) to identify candidate loci conferring Mn toxicity tolerance in rice (Oryza sativa L.). A diversity panel of 288 genotypes was grown in hydroponic solutions in a greenhouse under optimal and toxic Mn concentrations. We applied a Mn toxicity treatment (5 ppm Mn2+, 3 weeks) at twelve days after transplanting. Mn toxicity caused moderate damage in rice in terms of biomass loss and symptom formation despite extremely high shoot Mn concentrations ranging from 2.4 to 17.4 mg g-1. The tropical japonica subpopulation was more sensitive to Mn toxicity than other subpopulations. Leaf damage symptoms were significantly correlated with Mn uptake into shoots. Association mapping was conducted for seven traits using 416741 single nucleotide polymorphism (SNP) markers using a mixed linear model, and detected six significant associations for the traits shoot manganese concentration and relative shoot length. Candidate regions contained genes coding for a heavy metal transporter, peroxidase precursor and Mn2+ ion binding proteins. The significant marker SNP-2.22465867 caused an amino acid change in a gene (LOC_Os02g37170) with unknown function. This study demonstrated significant natural variation in rice for Mn toxicity tolerance and the possibility of using GWAS to unravel genetic factors responsible for such complex traits.

Metabolic Differences Found In Seedlings of Rice Varieties That Produce Grains Low Versus High in Arsenic Concentration

USDA-ARS?s Scientific Manuscript database

Arsenic (As) occurs naturally in air, water and soil and is also present to some degree in all edible and non-edible plant tissues. Because As becomes more available for plant uptake when soils are flooded, there is more concern about As in rice than other grain crops. Our research objective was t...

Modeling plant density and ponding water effects on flooded rice evapotranspiration and crop coefficients: critical discussion about the concepts used in current methods

NASA Astrophysics Data System (ADS)

Aschonitis, Vassilis; Diamantopoulou, Maria; Papamichail, Dimitris

2018-05-01

The aim of the study is to propose new modeling approaches for daily estimations of crop coefficient K c for flooded rice ( Oryza sativa L., ssp. indica) under various plant densities. Non-linear regression (NLR) and artificial neural networks (ANN) were used to predict K c based on leaf area index LAI, crop height, wind speed, water albedo, and ponding water depth. Two years of evapotranspiration ET c measurements from lysimeters located in a Mediterranean environment were used in this study. The NLR approach combines bootstrapping and Bayesian sensitivity analysis based on a semi-empirical formula. This approach provided significant information about the hidden role of the same predictor variables in the Levenberg-Marquardt ANN approach, which improved K c predictions. Relationships of production versus ET c were also built and verified by data obtained from Australia. The results of the study showed that the daily K c values, under extremely high plant densities (e.g., for LAI max > 10), can reach extremely high values ( K c > 3) during the reproductive stage. Justifications given in the discussion question both the K c values given by FAO and the energy budget approaches, which assume that ET c cannot exceed a specific threshold defined by the net radiation. These approaches can no longer explain the continuous increase of global rice yields (currently are more than double in comparison to the 1960s) due to the improvement of cultivars and agriculture intensification. The study suggests that the safest method to verify predefined or modeled K c values is through preconstructed relationships of production versus ET c using field measurements.

Wetland storage to reduce flood damages in the Red River

Treesearch

Steven Shultz

2000-01-01

The restoration of previously drained wetlands to store water was not found to be an economically feasible strategy to reduce flood related damages in two sub-watersheds of the Red River Valley (the Maple River Watershed in North Dakota, and the Wild Rice Watershed of Minnesota). Restoring wetlands, while providing full ecological services, was less feasible, even...

Assessment of the air-soil partitioning of polycyclic aromatic hydrocarbons in a paddy field using a modified fugacity sampler.

PubMed

Wang, Yan; Luo, Chunling; Wang, Shaorui; Liu, Junwen; Pan, Suhong; Li, Jun; Ming, Lili; Zhang, Gan; Li, Xiangdong

2015-01-06

Rice, one of the most widely cultivated crops, has received great attention in contaminant uptake from soil and air, especially for the special approaches used for its cultivation. The dry-wet alternation method can influence the air-soil partitioning of semivolatile organic compounds (SVOCs) in the paddy ecosystem. Here, we modified a fugacity sampler to investigate the air-surface in situ partitioning of ubiquitous polycyclic aromatic hydrocarbons (PAHs) at different growth stages in a suburban paddy field in South China. The canopy of rice can form a closed space, which acts like a chamber that can force the air under the canopy to equilibrate with the field surface. When we compared the fugacities calculated using a fugacity model of the partition coefficients to the measured fugacities, we observed similar trends in the variation, but significantly different values between different growing stages, especially during the flooding stages. However, the measured and calculated fugacity fractions were comparable when uncertainties in our calculations were considered, with the exception of the high molecular weight (HMW) PAHs. The measured fugacity fractions suggested that the HMW PAHs were also closed to equilibrium between the paddy field and atmosphere. The modified fugacity sampler provided a novel way of accurately determining the in situ air-soil partitioning of SVOCs in a wet paddy field.

Evaluating the relative contribution of methane oxidation to methane emissions from young floodplain soils under Alternative Irrigation Management

NASA Astrophysics Data System (ADS)

Pierreux, Sofie; Verhoeven, Elizabeth; Akter, Masuda; Sleutel, Steven; Said-Pullicino, Daniel; Romani, Marco; Boeckx, Pascal

2016-04-01

To keep the pace with a yearly growing demand for rice by 1-2%, future rice production must come primarily from high yielding irrigated rice, putting a pressure on fresh water reserves. In this context, water saving Alternative Irrigation Management (AIM) is progressively applied worldwide. By introducing repeated or mid-seasonal drainage, AIM suppresses emission of CH4, otherwise prevalent in continuously flooded rice. However, little is known about the effect of AIM on the balance of CH4 genesis and oxidation in paddy soils. We studied relevant soil parameters and CH4 emissions in continuously flooded (CF) and alternately wetted and dried (AWD) rice paddies. During a field campaign at the Castello d'Agogna experimental station (Pavia, Italy), we measured in situ CH4 oxidation and emission rates using the closed gas chamber technique with or without application of CH2F2 as a selective inhibitor of CH4 oxidation. In addition, we determined potential CH4 oxidation rates using incubated soil slurries originating from the same experimental plots. The dataset was supplemented with depth differentiated monitoring of redox potential, temperature, moisture content and soil solution parameters (DOC, Fe2+, Mn3+, mineral N and dissolved CH4). Peaks in dissolved CH4 manifested at 5 and 12.5cm depth, with much lower and equal levels at 25, 50 and 80cm depth. Also depth distributions of dissolved Fe and Mn followed this pattern, indicating that methanogenic activity was primarily confounded to the topsoil. Seasonal CH4 emissions were about halved by AWD compared to CF management. After a fast decline of in situ oxidation within the AWD treatment at the beginning of the season, CH4 oxidation percentages in CF and AWD increased until the booting stage (67DAS), reaching peak values of 83% and 69% of produced CH4, respectively. CH4 oxidation thereafter gradually declined to nearly 50% in both treatments after the final drainage (103 DAS). Seasonal trends of potential CH4 oxidation rates were alike between CF and AWD fields, except at 52 DAS, when 5cm and 25cm depth CH4 oxidation capacities from CF soil slurries exceeded those under AWD. This could firstly be explained by higher observed soil solution CH4 concentrations of CF paddies, while in mid-season dissolved CH4 was nearly absent in case of AWD. We hypothesize that a larger methanotrophic biomass was present in the CF fields, explaining the higher CH4 oxidation potential, but this requires verification by qPCR. In addition, higher NH4+ concentrations were measured under CF, which as well might have favored methanotrophic activity. Ongoing analysis of stable isotope ratios (12C/13C) in both atmospheric and subsurface gas samples will complement the specific inhibitor-based CH4 oxidation estimates. Currently, the dataset assembled during this field experiment will be used to fine-tune the biogeochemical model 'rice DNDC' (DeNitrification-DeComposition) with specific attention to DNDC's capability to simulate CH4 oxidation and depth profiles . The model revision will take into account the seasonal and depth differentiated behavior of parameters relevant to the processes of CH4 oxidation, production and emission, and hence contribute to a more precise estimation of methane emissions under AIM.

More CH4 is emitted during the fallow than during the growing season in a Mediterranean rice agrosystems

NASA Astrophysics Data System (ADS)

Martínez-Eixarch, Maite; Ibàñez, Carles; Alcaraz, Carles; Viñas, Marc; Aranda, Xavier; Saldaña, J. Antonio

2017-04-01

Paddy rice fields are an important source of greenhouse gas emissions (GHG) as they contribute 5 to 20 % of the global anthropogenic CH4 emissions. The Ebre Delta (Catalonia, NE Spain) is one of the most important wetland complexes in the Western Mediterranean with 65 % of its area covered by rice fields. The results herein presented assess the annual pattern of CH4 emissions from paddy rice in Ebre Delta, including the growing and fallow seasons as well as the major environmental variables modulating such emissions. Fifteen rice fields covering the geo-physical variability of the Ebre Delta were selected for GHG monitoring. Common agronomic management was practiced: water direct-seeding, permanent flooding and moderate mineral fertilization during the growing season and straw incorporation, progressive drainage of the fields after the harvest. Fields are left fallow during the winter. GHG were monthly sampled, from May to December in 2015. In each field, three closed chambers were used; from each of these, four gas samples were taken over a 30-minute period. Simultaneously, hydrological regime, soil physic-chemical parameters and plant cover were measured. GHG were analysed by gas chromatography. A Generalized linear model analysis (GLM) was performed to assess the most important influencing factors on CH4 emissions. An information-theoretic approach was used to find the best approximating models. Overall, the CH4 emissions showed a bi-modal pattern, with peaks in July-August and in October. Emissions rates ranged from 2.1 ± 0.5 to 7.5 ± 1.4 mg C-CH4 m-2 h-1 in the growing season (May to September) and from 25.0 ± 5.7 to 20.1 ± 3.3 mg C-CH4 m-2 h-1 at post-harvest (October to December). In total, 314 kg C-CH4 ha-1 were emitted from Ebre Delta rice fields, of which 70 % during post-harvest. Larger off-season emissions were likely induced by straw incorporation. The results of the GLM-IT analysis revealed that during the growing season, soil Eh and water level were the most important factors influencing CH4 emissions, followed by soil temperature and plant cover, with similar degree of importance. During the fallow season, soil redox and water level were also the most important factors, along with air temperature. Throughout the growing and fallow seasons, soil Eh was negatively related to CH4 emissions whereas temperature and plant cover positively. Interestingly, water level showed a contrasting effect on CH4 emissions: positive during the growing season and negative the fallow. Traditionally, most of the research on GHG mitigation options in paddy rice has been focused on the rice growing period and less attention has been paid to the post-harvest season. The higher contribution of the fallow season to the total annual CH4 emissions evidenced in our study suggests that more effort should be made on this season when aiming at mitigating CH4 emissions, being water and straw management the key factors. Accordingly, we also recommend the inclusion of the fallow season for GHG inventories from paddy rice, usually neglected, to avoid CH4 emissions underestimations.

An integrated, multisensor system for the continuous monitoring of water dynamics in rice fields under different irrigation regimes.

PubMed

Chiaradia, Enrico Antonio; Facchi, Arianna; Masseroni, Daniele; Ferrari, Daniele; Bischetti, Gian Battista; Gharsallah, Olfa; Cesari de Maria, Sandra; Rienzner, Michele; Naldi, Ezio; Romani, Marco; Gandolfi, Claudio

2015-09-01

The cultivation of rice, one of the most important staple crops worldwide, has very high water requirements. A variety of irrigation practices are applied, whose pros and cons, both in terms of water productivity and of their effects on the environment, are not completely understood yet. The continuous monitoring of irrigation and rainfall inputs, as well as of soil water dynamics, is a very important factor in the analysis of these practices. At the same time, however, it represents a challenging and costly task because of the complexity of the processes involved, of the difference in nature and magnitude of the driving variables and of the high variety of field conditions. In this paper, we present the prototype of an integrated, multisensor system for the continuous monitoring of water dynamics in rice fields under different irrigation regimes. The system consists of the following: (1) flow measurement devices for the monitoring of irrigation supply and tailwater drainage; (2) piezometers for groundwater level monitoring; (3) level gauges for monitoring the flooding depth; (4) multilevel tensiometers and moisture sensor clusters to monitor soil water status; (5) eddy covariance station for the estimation of evapotranspiration fluxes and (6) wireless transmission devices and software interface for data transfer, storage and control from remote computer. The system is modular and it is replicable in different field conditions. It was successfully applied over a 2-year period in three experimental plots in Northern Italy, each one with a different water management strategy. In the paper, we present information concerning the different instruments selected, their interconnections and their integration in a common remote control scheme. We also provide considerations and figures on the material and labour costs of the installation and management of the system.

Habitat Suitability Index Models: Mottled duck

USGS Publications Warehouse

Rorabaugh, James C.; Zwank, Phillip J.

1983-01-01

The mottled duck is a mallard-like resident species of the Gulf of Mexico coast, from the marshes of Pearl River on the Lou i si ana-Ht ss t ss ipp i border to the Al varado Lagoon near Veracruz, Mexico (Bell rose 1976). The highest densities of nesting mottl ed ducks are found in brackish to fresh coastal marshes (H. Bateman, Louisiana Department of Wildl ife and Fisheries, Baton Rouge; pers , comm.). Mottled ducks also inhabit prairie land near prairie potholes in Texas and flooded rice fields in Texas (Engel ing 1950) and Louisiana (Linscombe 1972).

Influence of Environmental Factors, Cultural Practices, and Herbicide Application on Seed Germination and Emergence Ecology of Ischaemum rugosum Salisb

PubMed Central

Lim, Charlemagne Alexander A.; Awan, Tahir Hussain; Sta. Cruz, Pompe C.; Chauhan, Bhagirath Singh

2015-01-01

Ischaemum rugosum Salisb. (Saramolla grass) is a noxious weed of rice that is difficult to control by chemical or mechanical means once established. A study was conducted to determine the effect of light, temperature, salt, drought, flooding, rice residue mulch, burial depth, and pre-emergence herbicides on seed germination and emergence of I. rugosum. Germination was stimulated by light and inhibited under complete darkness. Optimum temperature for germination was 30/20°C (97.5% germination). Germination reduced from 31 to 3.5% when the osmotic potential of the growing medium decreased from -0.1 to -0.6 MPa and no germination occurred at -0.8 MPa. Germination was 18 and 0.5% at 50 and 100 mM NaCl concentrations, respectively, but was completely inhibited at 150 mM or higher. Residue application at 1–6 t ha-1 reduced weed emergence by 35–88% and shoot biomass by 55–95%. The efficacy of pre-emergence herbicides increased with increasing application rates and decreased with increasing rice residue mulching. The efficacy of herbicides was in the order of oxadiazon> pendimethalin> pretilachlor. At 6 t ha-1, all herbicides, regardless of rates, did not differ from the control treatment. I. rugosum seeds buried at 2 cm or deeper did not emerge; however, they emerged by 4.5 and 0.5% at 0.5 and 1 cm depths, respectively, compared to the 39% germination for soil surface seeding. Flooding at 4 DAS or earlier reduced seedling emergence and shoot biomass while flooding at 8 DAS reduced only seedling emergence. The depth and timing of flooding independently reduced root biomass. Flooding at 4 and 6 cm depths reduced the root biomass. Relative to flooding on the day of sowing, flooding at 8 DAS increased root biomass by 89%. Similarly, flooding on the day of sowing and at 2 DAS reduced the root–shoot biomass ratio. Under the no-flood treatment, increasing rates of pretilachlor from 0.075 to 0.3 kg ai ha-1 reduced weed emergence by 61–79%. At the flooding depth of 2–4 cm, pretilachlor reduced weed emergence and shoot and root biomass, but the differences across rates were non-significant. Information generated in this study will be helpful in developing integrated weed management strategies for managing this weed. PMID:26368808

Earthshots: Satellite images of environmental change – Inland Delta of the Niger River, Mali

USGS Publications Warehouse

Adamson, Thomas

2016-01-01

This delta floods seasonally from September to December, as rainfall from the river’s headwaters in the Guinea Highlands reaches the delta’s vast flat floodplain. The southern part of the delta is low-lying floodplain with expanses of wetland grasses and reeds. The northern part has sand ridges that emerge from the water during the flood season. The seasonal flooding supports fisheries, pasture, and rice farming. Over 1 million people depend on resources in the delta.

Impact of Water Management on Efficacy of Insecticide Seed Treatments Against Rice Water Weevil (Coleoptera: Curculionidae) in Mississippi Rice

PubMed Central

Adams, A.; Gore, J.; Musser, F.; Cook, D.; Catchot, A.; Walker, T.; Awuni, G. A.

2015-01-01

Two experiments were conducted at the Delta Research and Extension Center in Stoneville, MS, during 2011 and 2012 to determine the impact of water management practices on the efficacy of insecticidal seed treatments targeting rice water weevil, Lissorhoptrus oryzophilus Kuschel. Larval densities and yield were compared for plots treated with labeled rates of thiamethoxam, chlorantraniliprole, and clothianidin and an untreated control. In the first experiment, plots were subjected to flood initiated at 6 and 8 wk after planting. Seed treatments significantly reduced larval densities with the 8-wk flood timing, but not the 6-wk flood timing. Overall, the treated plots yielded higher than the control plots. In the second experiment, the impact of multiple flushes on the efficacy of insecticidal seed treatments was evaluated. Plots were subjected to zero, one, or two flushes with water. All seed treatments reduced larval densities compared with the untreated control. Significantly fewer larvae were observed in plots that received one or two flushes compared with plots that did not receive a flush. All seed treatments resulted in higher yields compared to the untreated control in the zero and one flush treatments. When two flushes were applied, yield from the thiamethoxam and clothianidin treated plots was not significantly different from those of the control plots, while the chlorantraniliprole treated plots yielded significantly higher than the control. These data suggest that time from planting to flood did not impact the efficacy of seed treatments, but multiple flushes reduced the efficacy of thiamethoxam and clothianidin. PMID:26470232

Relationships between the potential production of the greenhouse gases CO2, CH4 and N2O and soil concentrations of C, N and P across 26 paddy fields in southeastern China

NASA Astrophysics Data System (ADS)

Wang, Weiqi; Sardans, Jordi; Wang, Chun; Zeng, Congsheng; Tong, Chuan; Asensio, Dolores; Peñuelas, Josep

2017-09-01

Paddy fields are a major global anthropogenic source of greenhouse gases. China has the second largest area under rice cultivation, so determining the relationships between the emission of greenhouse gases and soil carbon content, nutrient availabilities and concentrations and physical properties is crucial for minimizing the climatic impacts of rice agriculture. We examined soil nutrients and other properties, greenhouse-gas production and their relationships in 26 paddy fields throughout the province of Fujian in China, one of the most important provinces for rice production. High P and K concentrations, contents and availabilities were correlated with low rates of CO2 production, whereas high C and N contents were correlated with high rates of CH4 production. Mean annual precipitation (MAP) and rates of gas production were not clearly correlated, at least partly due to the management of flooding that can mask the effect of precipitation. Higher mean annual temperatures and soil Fe contents favored the production of N2O. C, N, P and K concentrations and their ratios, especially the C:K and N:K ratios, and P availability were correlated with CO2 and CH4 production across the province, with higher C:K and N:K ratios correlated positively with increased CO2 production and available P correlated negatively with CH4 production. A management strategy to avoid excessive C accumulation in the soil and to increase P availability and decrease available Fe contents would likely decrease the production of greenhouse gases.

Impact of Organic Amendments on Global Warming Potential of Diversified Tropical Rice Rotation Systems

NASA Astrophysics Data System (ADS)

Janz, B.; Weller, S.; Kraus, D.; Wassmann, R.; Butterbach-Bahl, K.; Ralf, K.

2017-12-01

Paddy rice cultivation is increasingly challenged by irrigation water scarcity, which is forcing farmers to change traditional rice cultivation from flooded double-rice systems to the introduction of well-aerated upland crops during dry season. Emissions of methane (CH4) are expected to decrease, while there is a risk of increasing emissions of nitrous oxide (N2O) and decreasing soil organic carbon (SOC) stocks through volatilization in the form of carbon dioxide (CO2). We present a unique dataset of long-term continuous greenhouse gas emission measurements (CH4 and N2O) in the Philippines to assess global warming potentials (GWP) of diversified rice crop rotations including different field management practices such as straw residue application and legume intercropping. Since 2012, more than four years of CH4 and N2O emissions in double-rice cropping (R-R) and paddy rice rotations diversified with either maize (R-M) or aerobic rice (R-A) during dry season have been collected. Introduction of upland crops reduced irrigation water use and CH4 emissions by 66-81% and 95-99%, respectively. Although dry season N2O emissions increased twice- to threefold in the diversified systems, the strong reduction of CH4 led to a significantly lower annual GWP (CH4 + N2O) as compared to the traditional R-R system. Diversified crop management practices were first implemented during land-preparation for dry season 2015 where i) 6 t/ha rice straw was returned to the field and ii) mungbean was grown as a cover-crop between dry and wet season in addition to rice straw application. The input of organic material (straw and mungbean) led to higher substrate availability for methanogens during the following season. Therefore, GWP was 9-39% higher following straw incorporation than the control treatment. This increase was mainly driven by additional CH4 emissions. Even more, mungbean intercropping further increased GWPs, whereby the increment was highest in R-R rotation (88%) and lowest in R-M rotation (55%), with annual emissions of 11.8 and 5.6 t CO2 eq. ha-1, respectively. Nevertheless, regarding a future expansion of lowland-upland rotations due to water scarcity in SE Asia it can be expected that input of crop residues can counteract the SOC loss that is likely associated with the shift to more aerated soil conditions under upland crops.

Towards Global Simulation of Irrigation in a Land Surface Model: Multiple Cropping and Rice Paddy in Southeast Asia

NASA Technical Reports Server (NTRS)

Beaudoing, Hiroko Kato; Rodell, Matthew; Ozdogan, Mutlu

2010-01-01

Agricultural land use significantly influences the surface water and energy balances. Effects of irrigation on land surface states and fluxes include repartitioning of latent and sensible heat fluxes, an increase in net radiation, and an increase in soil moisture and runoff. We are working on representing irrigation practices in continental- to global-scale land surface simulation in NASA's Global Land Data Assimilation System (GLDAS). Because agricultural practices across the nations are diverse, and complex, we are attempting to capture the first-order reality of the regional practices before achieving a global implementation. This study focuses on two issues in Southeast Asia: multiple cropping and rice paddy irrigation systems. We first characterize agricultural practices in the region (i.e., crop types, growing seasons, and irrigation) using the Global data set of monthly irrigated and rainfed crop areas around the year 2000 (MIRCA2000) dataset. Rice paddy extent is identified using remote sensing products. Whether irrigated or rainfed, flooded fields need to be represented and treated explicitly. By incorporating these properties and processes into a physically based land surface model, we are able to quantify the impacts on the simulated states and fluxes.

Shorebird use of managed wetlands in the Mississippi Alluvial Valley

USGS Publications Warehouse

Twedt, Daniel J.; Nelms, Curtis O.; Rettig, Virginia E.; Aycock, S. Ray

1998-01-01

We assessed shorebird densities on managed wetland habitats during fall and winter within the primarily agricultural landscape of the Mississippi Alluvial Valley. From November through March, shorebird densities were greater on soybean fields than on rice or moist-soil fields. Killdeer (Charadrius vociferus) and Common Snipe (Gallinago gallinago) were common throughout winter, whereas Yellowlegs (Tringa spp.) and ?peep? sandpipers (Calidris spp.) were present but less abundant. During fall, Dowitchers (Limnodromus spp.), Pectoral Sandpipers (Calidris melanotos), Killdeer, and peep sandpipers were the most abundant species on managed shorebird habitat units. Although shorebird densities were consistently greater on habitats managed by drawing down existing water, we were unable to detect a significant difference in densities from areas managed by flooding previously dry habitat.

Behaviour of bentazon as influenced by water and tillage management in rice-growing conditions.

PubMed

López-Piñeiro, Antonio; Peña, David; Albarrán, Ángel; Sánchez-Llerena, Javier; Rato-Nunes, José Manuel; Rozas, María Ángeles

2017-06-01

Bentazon is a widely used herbicide in rice agroecosystems that has commonly been found in water resources. To assess how tillage and water regimes affect sorption/desorption, dissipation and leaching of bentazon in Mediterranean rice-growing conditions, field experiments were carried out using tillage and flooding (TF), tillage and sprinkler irrigation (TS), no-tillage and sprinkler irrigation (NTS) and long-term no-tillage and sprinkler irrigation (NTS7). After 3 years, the K d values in TS were 2.3, 1.6 and 1.7 times lower than the values in NTS7, NTS and TF respectively. Greater sorption of bentazon was related to higher contents in total organic carbon and, although to a lesser extent, in humic acids and dissolved organic carbon. The persistence of bentazon was significantly greater under anaerobic (half-life DT 50 = 94.1-135 days) than under aerobic (DT 50 = 42.4-91.3 days) incubation conditions for all management regimes. Leaching losses of bentazon were reduced from 78 and 74% in TS and TF to 61 and 62% in NTS7 and NTS respectively. The mid- and long-term implementation of sprinkler irrigation in combination with no-tillage could be considered a management system that is effective at reducing water contamination by bentazon in Mediterranean rice-growing agroecosystems. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

Impacts of dyke development in flood prone areas in the Vietnamese Mekong Delta to downstream flood hazard

NASA Astrophysics Data System (ADS)

Khanh Triet Nguyen, Van; Dung Nguyen, Viet; Fujii, Hideto; Kummu, Matti; Merz, Bruno; Apel, Heiko

2016-04-01

The Vietnamese Mekong Delta (VMD) plays an important role in food security and socio-economic development of the country. Being a low-lying coastal region, the VMD is particularly susceptible to both riverine and tidal floods, which provide, on (the) one hand, the basis for the rich agricultural production and the livelihood of the people, but on the other hand pose a considerable hazard depending on the severity of the floods. But despite of potentially hazardous flood, the area remain active as a rice granary due to its nutrient-rich soils and sediment input, and dense waterways, canals and the long standing experience of the population living with floods. In response to both farmers' requests and governmental plans, the construction of flood protection infrastructure in the delta progressed rapidly in the last twenty years, notably at areas prone to deep flooding, i.e. the Plain of Reeds (PoR) and Long Xuyen Quadrangle (LXQ). Triple rice cropping becomes possible in farmlands enclosed by "full-dykes", i.e. dykes strong and high enough to prevent flooding of the flood plains for most of the floods. In these protected flood plains rice can be grown even during the peak flood period (September to November). However, little is known about the possibly (and already alleged) negative impacts of this fully flood protection measure to downstream areas. This study aims at quantifying how the flood regime in the lower part of the VMD (e.g. Can Tho, My Thuan, …) has been changed in the last 2 recent "big flood" events of 2000 and 2011 due to the construction of the full-dyke system in the upper part. First, an evaluation of 35 years of daily water level data was performed in order to detect trends at key gauging stations: Kratie: upper boundary of the Delta, Tan Chau and Chau Doc: areas with full-dyke construction, Can Tho and My Thuan: downstream. Results from the Mann-Kendall (MK) test show a decreasing trend of the annual maximum water level at 3 stations Kratie, Tan Chau and Chau Doc. The MK test statistic results (Z) for these stations are -0.23, -1.39 and -0.84 respectively. In contrary, significant increasing trend (at α = 1%) of annual flood peak at Can Tho and My Thuan is calculated, with the Z value are 5.20 and 4.28. A Monte Carlo experiment by adding assumed observation errors of 5%, 10% and 15% results in similar trend for these stations. After the trend analysis, a set of scenarios are generated based on various hydrological boundaries, infrastructure developments and climate change scenarios. The scenarios are simulated with the quasi-2D hydrodynamic model for the Mekong Delta (Dung, 2011; Manh, 2014) in order to separate and quantify the impacts of flood protection measures to the flood regime in the lower part of the delta in a spatially explicit manner, with a special focus on the urban and economic centers Can Tho and My Thuan. Based on these scenarios the change in flood hazard caused by the infrastructure development that has to be expected is described and possible mitigation actions are proposed.

Wheat production in Bangladesh: its future in the light of global warming.

PubMed

Hossain, Akbar; Teixeira da Silva, Jaime A

2013-01-01

The most fundamental activity of the people of Bangladesh is agriculture. Modelling projections for Bangladesh indicate that warmer temperatures linked to climate change will severely reduce the growth of various winter crops (wheat, boro rice, potato and winter vegetables) in the north and central parts. In summer, crops in south-eastern parts of the country are at risk from increased flooding as sea levels increase. Wheat is one of the most important winter crops and is temperature sensitive and the second most important grain crop after rice. In this review, we provide an up-to-date and detailed account of wheat research of Bangladesh and the impact that global warming may have on agriculture, especially wheat production. Although flooding is not of major importance or consequence to the wheat crop at present, some perspectives are provided on this stress since wheat is flood sensitive and the incidence of flooding is likely to increase. This information and projections will allow wheat breeders to devise new breeding programmes to attempt to mitigate future global warming. We discuss what this implies for food security in the broader context of South Asia.

Wheat production in Bangladesh: its future in the light of global warming

PubMed Central

Hossain, Akbar; Teixeira da Silva, Jaime A.

2012-01-01

Background and aims The most fundamental activity of the people of Bangladesh is agriculture. Modelling projections for Bangladesh indicate that warmer temperatures linked to climate change will severely reduce the growth of various winter crops (wheat, boro rice, potato and winter vegetables) in the north and central parts. In summer, crops in south-eastern parts of the country are at risk from increased flooding as sea levels increase. Key facts Wheat is one of the most important winter crops and is temperature sensitive and the second most important grain crop after rice. In this review, we provide an up-to-date and detailed account of wheat research of Bangladesh and the impact that global warming may have on agriculture, especially wheat production. Although flooding is not of major importance or consequence to the wheat crop at present, some perspectives are provided on this stress since wheat is flood sensitive and the incidence of flooding is likely to increase. Projections This information and projections will allow wheat breeders to devise new breeding programmes to attempt to mitigate future global warming. We discuss what this implies for food security in the broader context of South Asia. PMID:23304431

Improved Understanding of the Photosynthetic Response of Seven Rice Genotypes with Different Drought Sensitivity using Light and CO2 Response Curves

NASA Astrophysics Data System (ADS)

Mitra, B.; Basu, S.; Bereznyakov, D.; Pereira, A.; Naithani, K. J.

2015-12-01

Drought across different agro-climatic regions of the world has the capacity to drastically impact the yield potential of rice. Consequently, there is growing interest in developing drought tolerant rice varieties with high yield. We parameterized two photosynthesis models based on light and CO2 response curves for seven different rice genotypes with different drought survival mechanisms: sensitive (Nipponbar, TEJ), resistance (Bengal, TRJ), avoidance by osmotic adjustment (Kaybonnet, TRJ; IRAT177, TRJ; N22, Aus; Vandana, Aus; and O Glabberrima, 316603). All rice genotypes were grown in greenhouse conditions (24 °C ± 3°C air temperature and ~ 600 μmol m-2 s-1 light intensity) with light/dark cycles of 10/14 h in water filled trays simulating flooded conditions. Measurements were conducted on fully grown plants (35 - 60 days old) under simulated flooded and drought conditions. Preliminary results have shown that the drought sensitive genotype, Nipponbare has the lowest photosynthetic carboxylation capacity (Vcmax) and a similar electron transport rate (Jmax) compared to the drought resistant genotype IRAT 177. Mitochondrial respiration (Rd) of all the genotypes were similar while quantum yield of the drought sensitive genotype was greater than that of the drought resistant genotypes. While both drought tolerant and drought sensitive rice genotypes have the same photosynthetic yield, from an irrigation perspective the former would require less 'drop per grain'. This has enormous economic and management implications on account of dwindling water resources across the world due to drought.

Diversity and activity of nitrogen fixing archaea and bacteria associated with micro-environments of wetland rice

NASA Astrophysics Data System (ADS)

Schmidt, Hannes; Woebken, Dagmar

2017-04-01

Wetland rice is one of the world's most important crop plants. The cultivation on waterlogged paddy soils is strongly limited by nitrogen (N), which is typically supplied by industrial fertilizers that are not only costly but also exhibit hazardous effects on the environment. It has been reported that "Biological Nitrogen Fixation" through N2-fixing bacteria and archaea (diazotrophs) can alleviate the N-shortage in rice cultivation, thus carrying out an important ecosystem function. However, our understanding of the diversity and in situ N2 fixation activity of diazotrophs in flooded rice fields is still rudimentary. Moreover, knowledge on the impact of biochemical gradients established by root activity (i.e. exudation, radial oxygen loss) on the functioning of N-fixing microorganisms in paddy soil ecosystems is limited. We aimed at studying underlying processes on biologically relevant scales. Greenhouse studies were performed to identify key factors that control rice-diazotroph association and related N2 fixation activities. Paddy soils of different geographical origin were cultivated with two commercially used genotypes of wetland rice. Samples were separated into bulk soil, rhizosphere soil, rhizoplane, and roots at flowering stage of rice plant development. These samples were subjected to functional assays and various molecular biological techniques in order to analyze the associated diazotroph communities. Based on Illumina amplicon sequencing of nifH genes and transcripts, we show that the diversity and potential activity of diazotroph communities varies according to micro-environments. We will comparatively discuss the influence of (a) the soil microbial "seed bank" and (b) plant genotype in shaping the respective microbiomes and selecting for potentially active diazotrophs. Actual N2 fixation activities of soil-genotype combinations and micro-environments will be shown on the basis of incubation assays using 15N2-containing atmospheres. Areas of potential N-transfer between diazotrophs and rice roots will be presented via the detection and visualization of spatial colonization patterns of selected diazotrophic groups on rice rhizoplanes. Our approach will help to increase the understanding of the contribution of Biological Nitrogen Fixation to rice cultivation in paddy soil ecosystems.

Arsenic in rice agrosystems (water, soil and rice plants) in Guayas and Los Ríos provinces, Ecuador.

PubMed

Otero, X L; Tierra, W; Atiaga, O; Guanoluisa, D; Nunes, L M; Ferreira, T O; Ruales, J

2016-12-15

Geogenic arsenic (As) can accumulate and reach high concentrations in rice grains, thus representing a potential threat to human health. Ecuador is one of the main consumers of rice in South America. However, there is no information available about the concentrations of As in rice agrosystems, although some water bodies are known to contain high levels of the element. We carried out extensive sampling of water, soil, rice plants and commercial rice (obtained from local markets). Water samples were analysed to determine physico-chemical properties and concentrations of dissolved arsenic. Soil samples were analysed to determine total organic C, texture, total Fe and amorphous Fe oxyhydroxides (Fe Ox ), total arsenic (tAs) and the bioavailable fraction (As Me ). The different plant parts were analysed separately to determine total (tAs), inorganic (iAs) and organic arsenic (oAs). Low concentrations of arsenic were found in samples of water (generally <10μgl -1 ) and soil (4.48±3mgkg -1 ). The tAs in the rice grains was within the usual range (0.042-0.125mgkg -1 dry weight, d.w.) and was significantly lower than in leaves (0.123-0.286mgkg -1 d.w.) and stems (0.091-0.201mgkg -1 d.w.). The Fe Ox and tAs and also As Me in flood water were negatively correlated with tAs in the plants. However, the concentrations of As in stems and leaves were linearly correlated with tAs in the soil and flood water. The relationship between tAs and arsenic in the grain fitted a logarithmic function, as did that between tAs in the grain and the stem. The findings seem to indicate that high concentrations of arsenic in the environment (soil or water) or in the rice stem do not necessarily imply accumulation of the element in the grain. The iAs form was dominant (>80%) in all parts of the rice plants. Copyright © 2016 Elsevier B.V. All rights reserved.

Diversity and population dynamics of pests and predators in irrigated rice fields with treated and untreated pesticide.

PubMed

Rattanapun, W

2012-01-01

The monitoring of rice pests and their predators in pesticide untreated and treated rice fields was conducted at the southern of Thailand. Twenty-two species in 15 families and 6 orders of rice pests were sampled from untreated rice field. For treated rice field, 22 species in 14 families and 5 orders of rice pest were collected. Regardless of treatment type, dominant species and individual number of rice pest varied to physiological stage of rice. Lepidopteran pests had highest infestation during the vegetative stage of rice growth, while hemipteran pests composed of hopper species (Hemipetra: Auchenorrhyncha) and heteropteran species (Hemiptera: Heteroptera) were dominant groups during the reproductive stage and grain formation and ripening stage of rice growth. In contrast, dominant species of predator did not change throughout rice growing season. There were 35 species in 25 families and seven orders and 40 species in 29 families and seven orders of predators collected from untreated and treated rice field, respectively. Major predators of both rice fields were Micraspis discolor (Fabricius) (Coleoptera: Coccinellidae), Tetragnatha sp. (Araneae: Tetragnathidae) and Agriocnemis pygmaea Rambur (Odonata: Agrionidae). The population dynamic of predators were not related with rice pest population in both treatments. However, the fluctuation of population pattern of rice pests in the untreated treatment were more distinctly synchronized with their predators than that of the treated treatment. There were no significant differences in the total number of rice pest and predator between two treatments at vegetative and reproductive stages of rice growth. Untreated rice field had a higher population number of predator and a lower population number of rice pest than that of treated rice field during grain formation and ripening stages. These results indicated the ago-ecosystem balance in rice fields could be produced through minimal pesticide application, in order to allow the natural balance between pests and their predators to be restored and maintained.

Transgenic Bacillus thuringiensis (Bt) rice is safer to aquatic ecosystems than its non-transgenic counterpart.

PubMed

Li, Guangsheng; Wang, Yongmo; Liu, Biao; Zhang, Guoan

2014-01-01

Rice lines genetically modified with the crystal toxin genes from Bacillus thuringiensis (Bt) have experienced rapid development, with biosafety certificates for two Bt rice lines issued in 2009. There has still been no commercial release of these lines yet due to public concerns about human health and environmental risks. Some studies confirmed that Bt rice was as safe as conventional rice to non-target organisms when pesticides were not applied, however, pesticides are still required in Bt rice to control non-lepidopteran pests. In this study, we assessed the environmental effects of two Bt rice lines expressing either the cry1Ab/1Ac or cry2A genes, respectively, by using zooplanktons as indicator species under normal field management practices using pesticides when required. In the whole rice growing season, non-Bt rice was sprayed 5 times while Bt rice was sprayed 2 times, which ensured both rice achieved a normal yield. Field investigations showed that rice type (Bt and non-Bt) significantly influenced zooplankton abundance and diversity, which were up to 95% and 80% lower in non-Bt rice fields than Bt rice fields. Laboratory rearing showed that water from non-Bt rice fields was significantly less suitable for the survival and reproduction of Daphnia magna and Paramecium caudatum in comparison with water from Bt rice fields. Higher pesticide residues were detected in the water from non-Bt than Bt rice fields, accounting for the bad performance of zooplankton in non-Bt field water. Our results demonstrate that Bt rice is safer to aquatic ecosystems than non-Bt rice, and its commercialization will be beneficial for biodiversity restoration in rice-based ecosystems.

Transgenic Bacillus thuringiensis (Bt) Rice Is Safer to Aquatic Ecosystems than Its Non-Transgenic Counterpart

PubMed Central

Li, Guangsheng; Wang, Yongmo; Liu, Biao; Zhang, Guoan

2014-01-01

Rice lines genetically modified with the crystal toxin genes from Bacillus thuringiensis (Bt) have experienced rapid development, with biosafety certificates for two Bt rice lines issued in 2009. There has still been no commercial release of these lines yet due to public concerns about human health and environmental risks. Some studies confirmed that Bt rice was as safe as conventional rice to non-target organisms when pesticides were not applied, however, pesticides are still required in Bt rice to control non-lepidopteran pests. In this study, we assessed the environmental effects of two Bt rice lines expressing either the cry1Ab/1Ac or cry2A genes, respectively, by using zooplanktons as indicator species under normal field management practices using pesticides when required. In the whole rice growing season, non-Bt rice was sprayed 5 times while Bt rice was sprayed 2 times, which ensured both rice achieved a normal yield. Field investigations showed that rice type (Bt and non-Bt) significantly influenced zooplankton abundance and diversity, which were up to 95% and 80% lower in non-Bt rice fields than Bt rice fields. Laboratory rearing showed that water from non-Bt rice fields was significantly less suitable for the survival and reproduction of Daphnia magna and Paramecium caudatum in comparison with water from Bt rice fields. Higher pesticide residues were detected in the water from non-Bt than Bt rice fields, accounting for the bad performance of zooplankton in non-Bt field water. Our results demonstrate that Bt rice is safer to aquatic ecosystems than non-Bt rice, and its commercialization will be beneficial for biodiversity restoration in rice-based ecosystems. PMID:25105299

A history of the Fish Farming Experimental Laboratory in Stuttgart, Arkansas and the transfer to the USDA/ARS Harry K. Dupree - Stuttgart National Aquaculture Research Center

USDA-ARS?s Scientific Manuscript database

In 1958, Congress enacted the Fish Rice Rotation Act that directed the Secretary of the Interior (in cooperation with USDA) to develop a program to solve problems related to production and harvest of warmwater fish. The idea was to establish a program to grow fish on flooded rice acreage in rotatio...

International tourist preference of Lodok Rice Field natural elements, the cultural rice field from Manggarai - Indonesia

NASA Astrophysics Data System (ADS)

March Syahadat, Ray; Trie Putra, Priambudi; Nuraini; Nailufar, Balqis; Fatmala Makhmud, Desy

2017-10-01

Lodok Rice Field or usually known as spiderweb rice field is a system of land division. It cultural rice field only found on Manggarai, Province of East Nusa Tenggara, Indonesia. The landscape of Lodok Rice Field was aesthetic and it has big potential for tourism development. The aim of this study was to know the perception of natural elements of Lodok Rice Field landscape that could influence international tourist to visited Lodok Rice Field. If we know the elements that could influenced the international tourist, we could used the landscape image for tourism media promotion. The methods of this study used scenic beauty estimation (SBE) by 85 respondents from 34 countries and Kruskal Wallis H test. The countries grouped by five continents (Asia, America, Europe, Africa, and Oceania). The result showed that the Asian respondents liked the elements of sky, mountain, and the rice field. Then, the other respondent from another continent liked the elements of sunshine, mountain, and the rice field. Although the Asian had different perception about landscape elements of rice field’s good view, it’s not differ significantly by Kruskal Wallis H test.

Effects of water-saving irrigation on emissions of greenhouse gases and prokaryotic communities in rice paddy soil.

PubMed

Ahn, Jae-Hyung; Choi, Min-Young; Kim, Byung-Yong; Lee, Jong-Sik; Song, Jaekyeong; Kim, Gun-Yeob; Weon, Hang-Yeon

2014-08-01

The effects of water-saving irrigation on emissions of greenhouse gases and soil prokaryotic communities were investigated in an experimental rice field. The water layer was kept at 1-2 cm in the water-saving (WS) irrigation treatment and at 6 cm in the continuous flooding (CF) irrigation treatment. WS irrigation decreased CH(4) emissions by 78 % and increased N(2)O emissions by 533 %, resulting in 78 % reduction of global warming potential compared to the CF irrigation. WS irrigation did not affect the abundance or phylogenetic distribution of bacterial/archaeal 16S rRNA genes and the abundance of bacterial/archaeal 16S rRNAs. The transcript abundance of CH(4) emission-related genes generally followed CH(4) emission patterns, but the difference in abundance between mcrA transcripts and amoA/pmoA transcripts best described the differences in CH(4) emissions between the two irrigation practices. WS irrigation increased the relative abundance of 16S rRNAs and functional gene transcripts associated with Anaeromyxobacter and Methylocystis spp., suggesting that their activities might be important in emissions of the greenhouse gases. The N(2)O emission patterns were not reflected in the abundance of N(2)O emission-related genes and transcripts. We showed that the alternative irrigation practice was effective for mitigating greenhouse gas emissions from rice fields and that it did not affect the overall size and structure of the soil prokaryotic community but did affect the activity of some groups.

Lead pollution from waterfowl hunting in wetlands and rice fields in Argentina.

PubMed

Romano, Marcelo; Ferreyra, Hebe; Ferreyroa, Gisele; Molina, Fernando V; Caselli, Andrea; Barberis, Ignacio; Beldoménico, Pablo; Uhart, Marcela

2016-03-01

The pollution of wetlands by lead derived from waterfowl hunting with lead shot was investigated. We determined soil pellet density and Pb concentration in soil, water and vegetation in natural wetlands and rice fields in central-eastern Santa Fe province, Argentina. Pellet density varied greatly among hunting sites (between 5.5-141 pellets/m(2)) and pellets were present in some control sites. Soil Pb concentration in most hunting sites (approximately 10-20 mg kg(-1)) was not much higher than in control sites (~5-10 mg kg(-1)), with the exception of the site with highest pellet density, which also had a high Pb soil concentration. In water, on the other hand, Pb concentration was similar in all sites (~4-7 μg L(-1)), both control and hunting, and higher than reference values for aquatic media. Lead was also present in vegetation, including grasses and rice crops, in almost all cases. Most soil-collection sites were slightly acidic, and were frequently flooded. These results strongly suggest that metallic Pb from spent shot is oxidized and dissolved due to wetland conditions. Thus, the pollutant is readily mobilized and distributed across all wetland areas, effectively homogenizing its concentration in locations with and without hunting activities. The replacement of lead by nontoxic materials in pellets appears to be the only effective way to prevent Pb pollution in wetlands. Copyright © 2015 Elsevier B.V. All rights reserved.

Water management controls net carbon exchange in drained and flooded agricultural peatlands in the Sacramento-San Joaquin Delta, CA

NASA Astrophysics Data System (ADS)

Hatala, J.; Detto, M.; Sonnentag, O.; Verfaillie, J. G.; Baldocchi, D. D.

2011-12-01

Draining peatlands for agricultural cultivation creates an ecosystem shift with some of the fastest rates and largest magnitudes of carbon loss attributable to land-use change, yet peatland drainage is practiced around the world due to the high economic benefit of fertile soil. The Sacramento-San Joaquin Delta in California was drained at the end of the 19th century for agriculture and human settlement, and as a result, has lost 5-8m of peat soil due to oxidation. To reverse subsidence and capture carbon, there is increasing interest in converting drained agricultural land-uses back to flooded conditions to inhibit further peat oxidation. However, this method remains relatively untested at the landscape-scale. This study analyzed the short-term effects of drained to flooded land-use conversion on the balance of carbon, water, and energy over two years at two landscapes in the Delta. We used the eddy covariance method to compare CO2, CH4, H2O, and energy fluxes under the same meteorological conditions in two different land-use types: a drained pasture grazed by cattle, and a flooded newly-converted rice paddy. By analyzing differences in the fluxes from these two land-use types we determined that water management and differences in the plant canopy both play a fundamental role in governing the seasonal pattern and the annual budgets of CO2 and CH4 fluxes at these two sites. While the pasture was a source of carbon to the atmosphere in both years, the rice paddy captured carbon through NEE, even after considering losses from CH4. Especially during the fallow winter months, flooding the soil at the rice paddy inhibited loss of CO2 through ecosystem respiration when compared with the carbon exchange from the drained pasture.

Assessing the groundwater recharge under various irrigation schemes in Central Taiwan

NASA Astrophysics Data System (ADS)

Chen, Shih-Kai; Jang, Cheng-Shin; Lin, Zih-Ciao; Tsai, Cheng-Bin

2014-05-01

The flooded paddy fields can be considered as a major source of groundwater recharge in Central Taiwan. The risk of rice production has increased notably due to climate change in this area. To respond to agricultural water shortage caused by climate change without affecting rice yield in the future, the application of water-saving irrigation is the substantial resolution. The System of Rice Intensification (SRI) was developed as a set of insights and practices used in growing irrigated rice. Based on the water-saving irrigation practice of SRI, impacts of the new methodology on the reducing of groundwater recharge were assessed in central Taiwan. The three-dimensional finite element groundwater model (FEMWATER) with the variable boundary condition analog functions, was applied in simulating groundwater recharge under different irrigation schemes. According to local climatic and environmental characteristics associated with SRI methodology, the change of infiltration rate was evaluated and compared with the traditional irrigation schemes, including continuous irrigation and rotational irrigation scheme. The simulation results showed that the average infiltration rate in the rice growing season decreased when applying the SRI methodology, and the total groundwater recharge amount of SRI with a 5-day irrigation interval reduced 12% and 9% compared with continuous irrigation (6cm constant ponding water depth) and rotational scheme (5-day irrigation interval with 6 cm initial ponding water depth), respectively. The results could be used as basis for planning long-term adaptive water resource management strategies to climate change in Central Taiwan. Keywords: SRI, Irrigation schemes, Groundwater recharge, Infiltration

[Effects of fish on field resource utilization and rice growth in rice-fish coculture].

PubMed

Zhang, Jian; Hu, Liang Liang; Ren, Wei Zheng; Guo, Liang; Wu, Min Fang; Tang, Jian Jun; Chen, Xin

2017-01-01

Rice field can provide habitat for fish and other aquatic animals. Rice-fish coculture can increase rice yield and simultaneously reduce the use of chemicals through reducing rice pest occurrence and nutrient complementary use. However, how fish uses food sources (e.g. phytoplankton, weeds, duckweed, macro-algal and snail) from rice field, and whether the nutrients releasing from those food sources due to fish transforming can improve rice growth are still unknown. Here, we conducted two field experiments to address these questions. One was to investigate the pattern of fish activity in the field using the method of video recording. The other was to examine the utilization of field resources by fish using stable isotope technology. Rice growth and rice yield were also exa-mined. Results showed that fish tended to be more active and significantly expanded the activity range in the rice-fish coculture compared to fish monoculture (fish not living together with rice plants). The contributions of 3 potential aquatic organisms (duckweed, phytoplankton and snail) to fish dietary were 22.7%, 34.8% and 30.0% respectively under rice-fish coculture without feed. Under the treatment with feed, however, the contributions of these 3 aquatic organisms to the fish die-tary were 8.9%, 5.9% and 1.6% respectively. The feed contribution was 71.0%. Rice-fish coculture significantly increased the nitrogen concentration in rice leaves, prolonged tillering stage by 10-12 days and increased rice spike rate and yield. The results suggested that raising fish in paddy field may transform the nutrients contained in field resources to bioavailable for rice plants through fish feeding activity, which can improve rice growth and rice yield.

Methane emission from a paddy field with pre-germinated system in Brazilian Southeast

NASA Astrophysics Data System (ADS)

Lima, M. A.; Luiz, A. J. B.; Villela, O. V.

2017-12-01

Methane is a major gas of greenhouse effect from agricultural activities, and the flooded paddy field is one of its sources. Methane production in the soil, under this cultivation, varies over the cropping season, due to plant physiological changes, climatic conditions, crop handling and local soil conditions, factors that, together, influence methane emissions and their amplitudes. Local measurements of CH4 emissions are essential for the improvement of national and regional gas emission inventories. Most part of the studies has been carried out in temperate and subtropical climate regions. This study aimed to determine the accumulated CH4 emission from a rice field with two different rice varieties under tropical climate. The CH4 emission assessments were held in the experimental area maintained by APTA (Agricultural Technology State Agency) in Pindamonhangaba, State of São Paulo (22°55' S, 45°30' W), Brazil, in two growing seasons (2013/4 and 2014/5). The soil is a Gleysol with clayey or loamy-clayey texture. The experiment had two varieties (IAC-105 and Epagri-106) in four blocks using pre-germinated system under continuously flooding management with addition of urea (80 kg N ha-1) as fertilizer. Gas efflux determination used the chamber-based method. The chambers (60 x 60 cm) of aluminum and insulating material were composed by permanent anchors, extensors and lids equipped with temperature sensor, fans and septum for sampling. The gas was sampled each five minutes till 25 minutes by using 60 mL BD plastic syringes and transferred to evacuated 12 mL LABCO vials. Gas sampling occurred once to twice a week and samples were analyzed using a Shimadzu GC-2014 gas chromatograph. Seasonal CH4 flux has varied from 3.1 to 11.8 g CH4 m-2. We have carried out a similar experiment in 2015/6 and 2016/2017 seasons and further analysis of all data will be done for assessment of the relation gas flux/productivity.

Soil concentration of glyphosate and AMPA under rice cultivation with contrasting levels of fertilization

NASA Astrophysics Data System (ADS)

Rey Montoya, Tania; Micaela Biassoni, María; Graciela Herber, Luciana; De Geronimo, Eduardo; Aparicio, Virginia

2017-04-01

Rice (Oryza sativa) is the world's most important crop species and occupies c. 150 mill ha. The province of Corrientes in Argentina leads the national production of rice cultivation. Glyphosate is a non-selective herbicide commonly used to control weeds. The molecule is inactivated once applied due to its adsorption in the soil, and once desorbed is degraded by soil microflora resulting in sarcosine and aminomethylphosphoric acid (AMPA) molecules. The objective of this investigation was to compare glyphosate and AMPA concentration in soil under different levels of fertilization along the growth season of the rice crop. A field experiment following a completely randomized design was carried out with four replicates. We evaluated four levels of fertilization (0-18-40): Control: 0 kg ha-1, Dose 1: 120 kg ha-1, Dose 2: 150 kg ha-1, Dose 3: 180 kg ha-1; and two levels of Glyphosate: with (Gly) or without (No) application. Four sampling moments were defined: pre-sowing (taken as reference), vegetative stage (V4, 30 days after application), in floral primordial differentiation-DPF (80 days post-application), and at physiological maturity-MF (125 days after application). Flooding was applied in V4 after sampling. The method used for determination and quantification was by ultra high-pressure liquid chromatography coupled to ESI UHPLC-MS / MS tandem mass spectrometer (+/-) (Acquit-Quattro Premier). We found that glyphosate and AMPA varied their concentration in soil according to the time of sampling. Detected levels of both molecules at pre-sowing indicate the persistence of this herbicide from earlier crop seasons. The highest concentration was measured in MF followed by V4. Interestingly, AMPA concentration showed higher values in V4 without application compared to the treatment with glyphosate application. On the other hand, in flooded soil both molecules presented a decrease in their concentration probably because of their dilution in water, increasing it again after the irrigation was suspended. The ratio between the concentration of glyphosate and AMPA molecules was positive, this means that to a greater presence of the original molecule, the greater the content of the metabolite, even after 125 days of the application of the herbicide.

Identification of rice field using Multi-Temporal NDVI and PCA method on Landsat 8 (Case Study: Demak, Central Java)

NASA Astrophysics Data System (ADS)

Sukmono, Abdi; Ardiansyah

2017-01-01

Paddy is one of the most important agricultural crop in Indonesia. Indonesia’s consumption of rice per capita in 2013 amounted to 78,82 kg/capita/year. In 2017, the Indonesian government has the mission of realizing Indonesia became self-sufficient in food. Therefore, the Indonesian government should be able to seek the stability of the fulfillment of basic needs for food, such as rice field mapping. The accurate mapping for rice field can use a quick and easy method such as Remote Sensing. In this study, multi-temporal Landsat 8 are used for identification of rice field based on Rice Planting Time. It was combined with other method for extract information from the imagery. The methods which was used Normalized Difference Vegetation Index (NDVI), Principal Component Analysis (PCA) and band combination. Image classification is processed by using nine classes, those are water, settlements, mangrove, gardens, fields, rice fields 1st, rice fields 2nd, rice fields 3rd and rice fields 4th. The results showed the rice fields area obtained from the PCA method was 50,009 ha, combination bands was 51,016 ha and NDVI method was 45,893 ha. The accuracy level was obtained PCA method (84.848%), band combination (81.818%), and NDVI method (75.758%).

Zn uptake, translocation and grain Zn loading in rice (Oryza sativa L.) genotypes selected for Zn deficiency tolerance and high grain Zn

PubMed Central

Impa, Somayanda M.; Morete, Mark J.; Ismail, Abdelbagi M.; Schulin, Rainer; Johnson-Beebout, Sarah E.

2013-01-01

Zn deficiency is a widespread problem in rice (Oryza sativa L.) grown under flooded conditions, limiting growth and grain Zn accumulation. Genotypes with Zn deficiency tolerance or high grain Zn have been identified in breeding programmes, but little is known about the physiological mechanisms conferring these traits. A protocol was developed for growing rice to maturity in agar nutrient solution (ANS), with optimum Zn-sufficient growth achieved at 1.5 μM ZnSO4.7H2O. The redox potential in ANS showed a decrease from +350 mV to −200 mV, mimicking the reduced conditions of flooded paddy soils. In subsequent experiments, rice genotypes contrasting for Zn deficiency tolerance and grain Zn were grown in ANS with sufficient and deficient Zn to assess differences in root uptake of Zn, root-to-shoot Zn translocation, and in the predominant sources of Zn accumulation in the grain. Zn efficiency of a genotype was highly influenced by root-to-shoot translocation of Zn and total Zn uptake. Translocation of Zn from root to shoot was more limiting at later growth stages than at the vegetative stage. Under Zn-sufficient conditions, continued root uptake during the grain-filling stage was the predominant source of grain Zn loading in rice, whereas, under Zn-deficient conditions, some genotypes demonstrated remobilization of Zn from shoot and root to grain in addition to root uptake. Understanding the mechanisms of grain Zn loading in rice is crucial in selecting high grain Zn donors for target-specific breeding and also to establish fertilizer and water management strategies for achieving high grain Zn. PMID:23698631

Escape to Ferality: The Endoferal Origin of Weedy Rice from Crop Rice through De-Domestication

PubMed Central

Gettler, Kyle A.; Burgos, Nilda R.; Fischer, Albert J.

2016-01-01

Domestication is the hallmark of evolution and civilization and harnesses biodiversity through selection for specific traits. In regions where domesticated lines are grown near wild relatives, congeneric sources of aggressive weedy genotypes cause major economic losses. Thus, the origins of weedy genotypes where no congeneric species occur raise questions regarding management effectiveness and evolutionary mechanisms responsible for weedy population success. Since eradication in the 1970s, California growers avoided weedy rice through continuous flood culture and zero-tolerance guidelines, preventing the import, presence, and movement of weedy seeds. In 2003, after decades of no reported presence in California, a weedy rice population was confirmed in dry-seeded fields. Our objectives were to identify the origins and establishment of this population and pinpoint possible phenotypes involved. We show that California weedy rice is derived from a different genetic source among a broad range of AA genome Oryzas and is most recently diverged from O. sativa temperate japonica cultivated in California. In contrast, other weedy rice ecotypes in North America (Southern US) originate from weedy genotypes from China near wild Oryza, and are derived through existing crop-wild relative crosses. Analyses of morphological data show that California weedy rice subgroups have phenotypes like medium-grain or gourmet cultivars, but have colored pericarp, seed shattering, and awns like wild relatives, suggesting that reversion to non-domestic or wild-like traits can occur following domestication, despite apparent fixation of domestication alleles. Additionally, these results indicate that preventive methods focused on incoming weed sources through contamination may miss burgeoning weedy genotypes that rapidly adapt, establish, and proliferate. Investigating the common and unique evolutionary mechanisms underlying global weed origins and subsequent interactions with crop relatives sheds light on how weeds evolve and addresses broader questions regarding the stability of selection during domestication and crop improvement. PMID:27661982

Escape to Ferality: The Endoferal Origin of Weedy Rice from Crop Rice through De-Domestication.

PubMed

Kanapeckas, Kimberly L; Vigueira, Cynthia C; Ortiz, Aida; Gettler, Kyle A; Burgos, Nilda R; Fischer, Albert J; Lawton-Rauh, Amy L

Domestication is the hallmark of evolution and civilization and harnesses biodiversity through selection for specific traits. In regions where domesticated lines are grown near wild relatives, congeneric sources of aggressive weedy genotypes cause major economic losses. Thus, the origins of weedy genotypes where no congeneric species occur raise questions regarding management effectiveness and evolutionary mechanisms responsible for weedy population success. Since eradication in the 1970s, California growers avoided weedy rice through continuous flood culture and zero-tolerance guidelines, preventing the import, presence, and movement of weedy seeds. In 2003, after decades of no reported presence in California, a weedy rice population was confirmed in dry-seeded fields. Our objectives were to identify the origins and establishment of this population and pinpoint possible phenotypes involved. We show that California weedy rice is derived from a different genetic source among a broad range of AA genome Oryzas and is most recently diverged from O. sativa temperate japonica cultivated in California. In contrast, other weedy rice ecotypes in North America (Southern US) originate from weedy genotypes from China near wild Oryza, and are derived through existing crop-wild relative crosses. Analyses of morphological data show that California weedy rice subgroups have phenotypes like medium-grain or gourmet cultivars, but have colored pericarp, seed shattering, and awns like wild relatives, suggesting that reversion to non-domestic or wild-like traits can occur following domestication, despite apparent fixation of domestication alleles. Additionally, these results indicate that preventive methods focused on incoming weed sources through contamination may miss burgeoning weedy genotypes that rapidly adapt, establish, and proliferate. Investigating the common and unique evolutionary mechanisms underlying global weed origins and subsequent interactions with crop relatives sheds light on how weeds evolve and addresses broader questions regarding the stability of selection during domestication and crop improvement.

Research and Development of a DNDC Online Model for Farmland Carbon Sequestration and GHG Emissions Mitigation in China.

PubMed

Jiang, Zaidi; Yin, Shan; Zhang, Xianxian; Li, Changsheng; Shen, Guangrong; Zhou, Pei; Liu, Chunjiang

2017-12-01

Appropriate agricultural practices for carbon sequestration and emission mitigation have a significant influence on global climate change. However, various agricultural practices on farmland carbon sequestration usually have a major impact on greenhouse gas (GHG) emissions. It is very important to accurately quantify the effect of agricultural practices. This study developed a platform-the Denitrification Decomposition (DNDC) online model-for simulating and evaluating the agricultural carbon sequestration and emission mitigation based on the scientific process of the DNDC model, which is widely used in the simulation of soil carbon and nitrogen dynamics. After testing the adaptability of the platform on two sampling fields, it turned out that the simulated values matched the measured values well for crop yields and GHG emissions. We used the platform to estimate the effect of three carbon sequestration practices in a sampling field: nitrogen fertilization reduction, straw residue and midseason drainage. The results indicated the following: (1) moderate decrement of the nitrogen fertilization in the sampling field was able to decrease the N₂O emission while maintaining the paddy rice yield; (2) ground straw residue had almost no influence on paddy rice yield, but the CH₄ emission and the surface SOC concentration increased along with the quantity of the straw residue; (3) compared to continuous flooding, midseason drainage would not decrease the paddy rice yield and could lead to a drop in CH₄ emission. Thus, this study established the DNDC online model, which is able to serve as a reference and support for the study and evaluation of the effects of agricultural practices on agricultural carbon sequestration and GHG emissions mitigation in China.

Potential Impacts of Climate Change on Sediment - Water Exchange of Mercury in a Managed Flood Conveyance System

NASA Astrophysics Data System (ADS)

Heim, W. A.; Stephenson, M.; Negrey, J.; Gill, G. A.; Coale, K. H.; DiGiorgio, C.; Harris, R. C.

2016-12-01

Yolo Bypass is the largest flood bypass in the Sacramento Valley, California. During high flow flood events water is diverted into the Yolo Bypass from the Sacramento River to control river stage and protect the cities of Sacramento, West Sacramento, and Davis from flooding. Climate change projections for the Yolo Bypass indicate the risk of flooding will increase. An increase in flooding would result in increased connectivity of the flood plain with downstream habitats as well as provide conditions favorable for in situ production of methylmercury (MeHg). Conversion of inorganic mercury (Hg) to the more toxic organic form MeHg in freshwater systems is generally accepted to be mediated by bacteria activity. There are a number of environmental variables (organic carbon, sulfate, oxygen) and conditions (temperature, porosity, soil type) that could influence the net production of MeHg and its ultimate release into the water column. This study investigated sediment-water exchange of both Hg and MeHg from the following habitat types in the Yolo Bypass: wild rice, white rice, seasonal wetlands, irrigated pasture, non-irrigated pasture, fallow land, farm land, freshwater tidal wetland, and agricultural drain. Two methods were used to determine sediment-water exchange of inorganic and organic mercury; first a direct assessment using incubated cores and second, modeling the sediment-water exchange from measurements of interstitial pore water concentration gradients. Results indicate habitat type, land use, and flooding influence Hg and MeHg fluxes. If flooding frequency increases in the Yolo Bypass mercury fluxes are expected to increase resulting in an increase in Hg load to downstream habitats and an increase in biotic exposure to MeHg in the system. A next step will be to utilize data generated from this study in the Dynamic Mercury Cycling Model (D-MCM) which will be used to improve our understanding of factors controlling production and transport of Hg and MeHg in the Yolo Bypass.

Floodplain farm fields provide novel rearing habitat for Chinook salmon

PubMed Central

Jeffres, Carson; Conrad, J. Louise; Sommer, Ted R.; Martinez, Joshua; Brumbaugh, Steve; Corline, Nicholas; Moyle, Peter B.

2017-01-01

When inundated by floodwaters, river floodplains provide critical habitat for many species of fish and wildlife, but many river valleys have been extensively leveed and floodplain wetlands drained for flood control and agriculture. In the Central Valley of California, USA, where less than 5% of floodplain wetland habitats remain, a critical conservation question is how can farmland occupying the historical floodplains be better managed to improve benefits for native fish and wildlife. In this study fields on the Sacramento River floodplain were intentionally flooded after the autumn rice harvest to determine if they could provide shallow-water rearing habitat for Sacramento River fall-run Chinook salmon (Oncorhynchus tshawytscha). Approximately 10,000 juvenile fish (ca. 48 mm, 1.1 g) were reared on two hectares for six weeks (Feb-March) between the fall harvest and spring planting. A subsample of the fish were uniquely tagged to allow tracking of individual growth rates (average 0.76 mm/day) which were among the highest recorded in fresh water in California. Zooplankton sampled from the water column of the fields were compared to fish stomach contents. The primary prey was zooplankton in the order Cladocera, commonly called water fleas. The compatibility, on the same farm fields, of summer crop production and native fish habitat during winter demonstrates that land management combining agriculture with conservation ecology may benefit recovery of native fish species, such as endangered Chinook salmon. PMID:28591141

Community composition of ammonia-oxidizing bacteria and archaea in rice field soil as affected by nitrogen fertilization.

PubMed

Wang, Yanan; Ke, Xiubin; Wu, Liqin; Lu, Yahai

2009-02-01

Little information is available on the ecology of ammonia-oxidizing bacteria (AOB) and archaea (AOA) in flooded rice soils. Consequently, a microcosm experiment was conducted to determine the effect of nitrogen fertilizer on the composition of AOB and AOA communities in rice soil by using molecular analyses of ammonia monooxygenase gene (amoA) fragments. Experimental treatments included three levels of N (urea) fertilizer, i.e. 50, 100 and 150 mgNkg(-1) soil. Soil samples were operationally divided into four fractions: surface soil, bulk soil deep layer, rhizosphere and washed root material. NH(4)(+)-N was the dominant form of N in soil porewater and increased with N fertilization. Cloning and sequencing of amoA gene fragments showed that the AOB community in the rice soil consisted of three major groups, i.e. Nitrosomonas communis cluster, Nitrosospira cluster 3a and cluster 3b. The sequences related to Nitrosomonas were predominant. There was a clear effect of N fertilizer and soil depth on AOB community composition based on terminal restriction fragment length polymorphism fingerprinting. Nitrosomonas appeared to be more abundant in the potentially oxic or micro-oxic fractions, including surface soil, rhizosphere and washed root material, than the deep layer of anoxic bulk soil. Furthermore, Nitrosomonas increased relatively in the partially oxic fractions and that of Nitrosospira decreased with the increasing application of N fertilizer. However, AOA community composition remained unchanged according to the denaturing gradient gel electrophoresis analyses.

Accumulation of methylmercury in rice and flooded soil in experiments with an enriched isotopic Hg(II) tracer

NASA Astrophysics Data System (ADS)

Strickman, R. J.; Mitchell, C. P. J.

2015-12-01

Methylmercury (MeHg) is a neurotoxin produced in anoxic aquatic sediments. Numerous factors, including the presence of aquatic plants, alter the biogeochemistry of sediments, affecting the rate at which microorganisms transform bioavailable inorganic Hg (IHg) to MeHg. Methylmercury produced in flooded paddy soils and its transfer into rice has become an important dietary consideration. An improved understanding of how MeHg reaches the grain and the extent to which rice alters MeHg production in rhizosphere sediments could help to inform rice cultivation practices. We conducted a controlled greenhouse experiment with thirty rice plants grown in individual, flooded pots amended with enriched 200Hg. Unvegetated controls were maintained under identical conditions. At three plant growth stages (vegetative growth, flowering, and grain maturity), ten plants were sacrificed and samples collected from soil, roots, straw, panicle, and grain of vegetated and unvegetated pots, and assessed for MeHg and THg concentrations. We observed consistent ratios between ambient and tracer MeHg between soils (0.36 ±0.04 — 0.44 ± 0.09) and plant compartments (0.23 ± 0.07 -0.34 ± 0.05) indicating that plant MeHg contamination originates in the soil rather than in planta methylation. The majority of this MeHg was absorbed between the tillering (4.48 ± 2.38 ng/plant) and flowering (8.43 ± 5.12 ng/pl) phases, with a subsequent decline at maturity (2.87 ± 1.23 ng/pl) only partly explained by translocation to the developing grain, indicating that MeHg was demethylated in planta. In contrast, IHg was absorbed from both soil and air, as evidenced by the higher ambient IHg concentrations compared to tracer (3.76 ± 1.19 vs. 0.27 ± 0.40 ng/g). Surprisingly, MeHg accumulation was significantly (p= 0.042-- 0.003) lower in vegetated vs. unvegetated sediments at flowering (1.41 ± 0.26 vs. 1.57 ± 0.23) and maturity (1.27 ± 0.22 vs. 1.71 ± 0.25), suggesting that plant exudates bound Hg(II) and reduced its bioavailability to mercury methylators. Our findings confirm, for the first time, the soil origin of MeHg to rice and suggest research towards enhancing in planta demethylation or reducing uptake during vegetative growth as mitigation measures for this serious public health concern.

Red River of the North, Reconnaissance Report: Wild Rice River.

DTIC Science & Technology

1980-12-01

2 lists the waste treatment facilities and needs of fifteen coumnities within the subbasin. Hydropower There are three dams located on the Wild Rice...potential hydroelectric sites. The dams were built primarily for flood control purposes and are classified as small-scale facilities. The main obstacles...drain a combined total area of 2,233 square miles. Several small low-water dams and a few larger impoundments have been constructed on the river and its

The emission of nitrous oxide upon wetting a rice soil following a dry season fallow

NASA Astrophysics Data System (ADS)

Byrnes, B. H.; Holt, L. S.; Austin, E. R.

1993-12-01

A greenhouse experiment was conducted to measure nitrous oxide (N2O) emissions from a soil, which had been planted to flooded transplanted rice, as it was rewetted to simulate the end of a dry season fallow period. The pots of soil had been cropped to transplanted rice with two commonly used nitrogen (N) fertilizer treatments and a control, and the soil had been puddled before transplanting. Large amounts of nitrate N accumulated in the soils during the dry season fallow, and the N fertilizers applied to the previous crop had little effect on nitrate accumulation. There was little N2O emission during the nitrification period. With water additions meant to simulate rainfall events at the beginning of a wet season, the soil redox dropped slightly, and large amounts of N2O began to be emitted. Large emissions began 5 days after each of the two simulated rainy season watering events and stopped abruptly at soil saturation, even though considerable amounts of nitrate still remained in the soil after saturation. Total measured emissions amounted to 6 to 7 kg N2O-N ha-1 for the period. Although these measurements were made in a system which may have favored nitrate accumulation, they are the first known measurements of N2O made from a rice soil as it is wetted. Nitrous oxide emitted from the flooding of rice soils that have accumulated nitrate during a dry season fallow may be a major source of N2O additions to the atmosphere.

Improved yield and Zn accumulation for rice grain by Zn fertilization and optimized water management.

PubMed

Wang, Yu-yan; Wei, Yan-yan; Dong, Lan-xue; Lu, Ling-li; Feng, Ying; Zhang, Jie; Pan, Feng-shan; Yang, Xiao-e

2014-04-01

Zinc (Zn) deficiency and water scarcity are major challenges in rice (Oryza sativa L.) under an intensive rice production system. This study aims to investigate the impact of water-saving management and different Zn fertilization source (ZnSO4 and Zn-EDTA) regimes on grain yield and Zn accumulation in rice grain. Different water managements, continuous flooding (CF), and alternate wetting and drying (AWD) were applied during the rice growing season. Compared with CF, the AWD regime significantly increased grain yield and Zn concentrations in both brown rice and polished rice. Grain yield of genotypes (Nipponbare and Jiaxing27), on the average, was increased by 11.4%, and grain Zn concentration by 3.9% when compared with those under a CF regime. Zn fertilization significantly increased Zn density in polished rice, with a more pronounced effect of ZnSO4 being observed as compared with Zn-EDTA, especially under an AWD regime. Decreased phytic acid content and molar ratio of phytic acid to Zn were also noted in rice grains with Zn fertilization. The above results demonstrated that water management of AWD combined with ZnSO4 fertilization was an effective agricultural practice to elevate grain yield and increase Zn accumulation and bioavailability in rice grains.

Climate Change Impact Assessment for Wheat and Rice Productivity, Haryana, India

NASA Astrophysics Data System (ADS)

Rana, M.; Singh, K. K.; Kumari, N.

2017-12-01

Agriculture presents a core of the India Economy and provides food and livelihood activities to much of the Indian population. However, the changing climate is putting challenges to agriculture. The mean temperature in India is increased by 0.1-0.3 degC in Kharif and 0.3-0.7 degC during rabi by 2010, and projected to further increase by 0.4-0.2 degC during Kharif and to 1.1-4.5degC in rabi by 2070. Similarly mean rainfall is projected to increase up to 10% during kharif and rabi by 2070.At same time, there is an increased possibility of climate extremes, such as the timing of onset of monsoon, intensities and frequency of floods and droughts (S.A. Khan et al.,2009).In addition, the rapid population growth at a rate of 1.2% per annum, expected to reach 1.53 billion by the end of 2030; is also a critical issue of this century. Keeping in mind the above facts, this study is carried out in one of major agriculture state in India. The related field data collected from the ongoing experiments in agriculture universities/institutes in the respective state and observed weather data from India Meteorological Dept.(IMD), New Delhi and future climate scenarios data from India Institute of Tropical Meteorology(IITM). Validated CERES Wheat and Rice model embedded in DSSATv4.6 used for simulating the climate change impacts. The yield simulations of crop models were obtained separately for baseline and future data The simulation result indicates significant impact of climate change on both wheat and rice yield. The reason for same attributed to increase in temperature that majorly impact rabi wheat and extreme weather events for Kharif rice. Keywords: Climate Change, CERES Rice-Wheat, Yield, Validation

Spatio-temporal dynamics in global rice gene expression (Oryza sativa L.) in response to high ammonium stress.

PubMed

Sun, Li; Di, Dongwei; Li, Guangjie; Kronzucker, Herbert J; Shi, Weiming

2017-05-01

Ammonium (NH 4 + ) is the predominant nitrogen (N) source in many natural and agricultural ecosystems, including flooded rice fields. While rice is known as an NH 4 + -tolerant species, it nevertheless suffers NH 4 + toxicity at elevated soil concentrations. NH 4 + excess rapidly leads to the disturbance of various physiological processes that ultimately inhibit shoot and root growth. However, the global transcriptomic response to NH 4 + stress in rice has not been examined. In this study, we mapped the spatio-temporal specificity of gene expression profiles in rice under excess NH 4 + and the changes in gene expression in root and shoot at various time points by RNA-Seq (Quantification) using Illumina HiSeqTM 2000. By comparative analysis, 307 and 675 genes were found to be up-regulated after 4h and 12h of NH 4 + exposure in the root, respectively. In the shoot, 167 genes were up-regulated at 4h, compared with 320 at 12h. According to KEGG analysis, up-regulated DEGs mainly participate in phenylpropanoid (such as flavonoid) and amino acid (such as proline, cysteine, and methionine) metabolism, which is believed to improve NH 4 + stress tolerance through adjustment of energy metabolism in the shoot, while defense and signaling pathways, guiding whole-plant acclimation, play the leading role in the root. We furthermore critically assessed the roles of key phytohormones, and found abscisic acid (ABA) and ethylene (ET) to be the major regulatory molecules responding to excess NH 4 + and activating the MAPK (mitogen-activated protein kinase) signal-transduction pathway. Moreover, we found up-regulated hormone-associated genes are involved in regulating flavonoid biosynthesis and are regulated by tissue flavonoid accumulation. Copyright © 2017 Elsevier GmbH. All rights reserved.

Research in rice fields

USGS Publications Warehouse

,

2000-01-01

Between 1987 and 1999, 2.4-3 million acres of rice were planted annually nationwide. Rice fields are a major component of the contemporary landscapes in the Gulf Coastal Plain, the Mississippi Alluvial Valley, and Central Valley of California. In 1998, approximately 600,000 acres of rice were planted in Louisiana. In the Louisiana plant commodities report for 1998, total value for rice was over $350 million; sugarcane was the only plant commodity that exceeded this value. Louisiana has over 2,000 rice farmers supporting over 12,000 jobs in the state. Rice fields in the United States receive high use by wildlife, especially shorebirds, wading birds, and waterfowl. Waterbirds use rice fields for food, shelter, and breeding habitat.

78 FR 28881 - Changes in Flood Hazard Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-16

... Council, 1005 Ridge Road, Munster, IN 46321. Iowa: Black Hawk (FEMA Docket No.: B- City of Cedar Falls The... of Rochester, Rochester, MN 55904. 201 4th Street Southeast, Room 281, Rochester, MN 55904. Rice...

78 FR 8162 - Changes in Flood Hazard Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2013-02-05

... 60446. Iowa: Black Hawk (FEMA Docket City of Cedar Falls The Honorable Jon Crews, 220 Clay Street, June..., Heights, Minnesota, 8150 Barbara Avenue, 55077. Inver Grove Heights, MN 55077. Rice (FEMA Docket No.: B...

Sulfate-reducing bacteria in rice field soil and on rice roots.

PubMed

Wind, T; Stubner, S; Conrad, R

1999-05-01

Rice plants that were grown in flooded rice soil microcosms were examined for their ability to exhibit sulfate reducing activity. Washed excised rice roots showed sulfate reduction potential when incubated in anaerobic medium indicating the presence of sulfate-reducing bacteria. Rice plants, that were incubated in a double-chamber (phylloshpere and rhizosphere separated), showed potential sulfate reduction rates in the anoxic rhizosphere compartment. These rates decreased when oxygen was allowed to penetrate through the aerenchyma system of the plants into the anoxic root compartment, indicating that sulfate reducers on the roots were partially inhibited by oxygen or that sulfate was regenerated by oxidation of reduced S-compounds. The potential activity of sulfate reducers on rice roots was consistent with MPN enumerations showing that H2-utilizing sulfate-reducing bacteria were present in high numbers on the rhizoplane (4.1 x 10(7) g-1 root fresh weight) and in the adjacent rhizosperic soil (2.5 x 10(7) g-1 soil dry weight). Acetate-oxidizing sulfate reducers, on the other hand, showed highest numbers in the unplanted bulk soil (1.9 x 10(6) g-1 soil dry weight). Two sulfate reducing bacteria were isolated from the highest dilutions of the MPN series and were characterized physiologically and phylogenetically. Strain F1-7b which was isolated from the rhizoplane with H2 as electron donor was related to subgroup II of the family Desulfovibrionaceae. Strain EZ-2C2, isolated from the rhizoplane on acetate, grouped together with Desulforhabdus sp. and Syntrophobacter wolinii. Other strains of sulfate-reducing bacteria originated from bulk soil of rice soil microcosms and were isolated using different electron donors. From these isolates, strains R-AcA1, R-IbutA1, R-PimA1 and R-AcetonA170 were Gram-positive bacteria which were affiliated with the genus Desulfotomaculum. The other isolates were members of subgroup II of the Desulfovibrionaceae (R-SucA1 and R-LacA1), were related to Desulforhabdus sp. (strain BKA11), Desulfobulbus (R-PropA1), or culstered between Desulfobotulus sapovorans and Desulfosarcina variabilis (R-ButA1 and R-CaprA1).

Investigation of biogeochemical controls on the formation, uptake and accumulation of methylmercury in rice paddies in the vicinity of a coal-fired power plant and a municipal solid waste incinerator in Taiwan.

PubMed

Su, Yen-Bin; Chang, Wei-Chun; Hsi, Hsing-Cheng; Lin, Chu-Ching

2016-07-01

Recent studies have shown that rice consumption is another critical route of human exposure to methylmercury (MeHg), the most toxic and accumulative form of mercury (Hg) in the food web. Yet, the mechanisms that underlie the production and accumulation of MeHg in the paddy ecosystem are still poorly understood. In 2013 and 2014, we conducted field campaigns and laboratory experiments over a rice growing season to examine Hg and MeHg cycling, as well as associated biogeochemistry in a suite of paddies close to a municipal solid waste incinerator and a coal-fired power plant station in Taiwan. Concentrations of total Hg and MeHg in paddy soil and rice grain at both sites were low and found not to exceed the control standards for farmland soil and edible rice in Taiwan. However, seasonal variations of MeHg concentrations observed in pore water samples indicate that the in situ bioavailability of inorganic Hg and activity of Hg-methylating microbes in the rhizosphere increased from the early-season and peaked at the mid-season, presumably due to the anoxia created under flooded conditions and root exudation of organic compounds. The presence of Hg-methylators was also confirmed by the hgcA gene detected in all root soil samples. Subsequent methylation tests performed by incubating the root soil with inorganic Hg and an inhibitor or stimulant specific for certain microbes further revealed that sulfate-reducers might have been the principal Hg-methylting guild at the study sites. Interestingly, results of hydroponic experiments conducted by cultivating rice in a defined nutrient solution amended with fixed MeHg and varying levels of MeHg-binding ligands suggested that chemical speciation in soil pore water may play a key role in controlling MeHg accumulation in rice, and both passive and active transport pathways seem to take place in the uptake of MeHg in rice roots. Copyright © 2016 Elsevier Ltd. All rights reserved.

Adaptation of ammonia-oxidizing microorganisms to environment shift of paddy field soil.

PubMed

Ke, Xiubin; Lu, Yahai

2012-04-01

Adaptation of microorganisms to the environment is a central theme in microbial ecology. The objective of this study was to investigate the response of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) to a soil medium shift. We employed two rice field soils collected from Beijing and Hangzhou, China. These soils contained distinct AOB communities dominated by Nitrosomonas in Beijing rice soil and Nitrosospira in Hangzhou rice soil. Three mixtures were generated by mixing equal quantities of Beijing soil and Hangzhou soil (BH), Beijing soil with sterilized Hangzhou soil (BSH), and Hangzhou soil with sterilized Beijing soil (HSB). Pure and mixed soils were permanently flooded, and the surface-layer soil where ammonia oxidation occurred was collected to determine the response of AOB and AOA to the soil medium shift. AOB populations increased during the incubation, and the rates were initially faster in Beijing soil than in Hangzhou soil. Nitrosospira (cluster 3a) and Nitrosomonas (communis cluster) increased with time in correspondence with ammonia oxidation in the Hangzhou and Beijing soils, respectively. The 'BH' mixture exhibited a shift from Nitrosomonas at day 0 to Nitrosospira at days 21 and 60 when ammonia oxidation became most active. In 'HSB' and 'BSH' mixtures, Nitrosospira showed greater stimulation than Nitrosomonas, both with and without N amendment. These results suggest that Nitrosospira spp. were better adapted to soil environment shifts than Nitrosomonas. Analysis of the AOA community revealed that the composition of AOA community was not responsive to the soil environment shifts or to nitrogen amendment. © 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

CH4 and N2O Emissions from Rice Paddy Soils in Vietnam - Identifying Regional Hotspots and Quantifying the Total Emission Strength using a Biogeochemical Model

NASA Astrophysics Data System (ADS)

Werner, C.; Kraus, D.; Mai, T. V.; Butterbach-Bahl, K.

2016-12-01

Agriculture is the economic backbone for over two thirds of Vietnam's population, providing food security, employment and income. However, agriculture in Vietnam is challenged by climate change and climate extremes and at the same time, agriculture remains a key source of greenhouse gas (GHG) emissions. The first bi-annual update report (BUR1), published in 2014 indicated that while the proportion of GHG emissions from agriculture had fallen from 43.1% to 33.2% from 2000 to 2010, the emission total increased from 65.1 mio to 88.4 mio t CO2e. Reducing GHG emissions from agriculture has thus become a key issue within the national strategy of GHG emission management. Here we present first data using IPCC Tier 3 modeling for quantifying the source strength of rice based crop systems for CH4 and N2O. We used LandscapeDNDC and linked it to a newly developed spatial landuse and land management database (climate, soil properties, and detailed field management data). Site application showed good agreement of simulated biomass, yield and GHG emissions with field observations, providing confidence for model use at national scale. Our results also show good agreement with national yield data and total annual emissions of the simulated period (2006-2015) ranged from 1060 - 1502 kt CH4 and 6.2 - 7.7 kt N2O, respectively. The dominating emission hotspot for CH4 is the Mekong Delta region with its double and triple rice cropping systems (819 kt CH4/yr, Fig. 1). With regard to N2O, emission hotspots have been identified to be closely related to regions with high fertilizer use and single to double rice cropping systems (Fig. 1). Though, our emission estimates are likely representing the best of current knowledge on national GHG emissions from rice based systems in Vietnam, the uncertainty is significant as information on rice system management remains vague. Sensitivity studies show that changes in field management affecting the soil organic carbon dynamics (duration of flooding, stubble amounts and fraction tilled or manure application) can lead to substantial differences in emission rates. In a next step we plan to explore mitigation options such as Alternative Wetting and Drying for reducing national GHG emissions from the agricultural sector and to identify regions which are most suitable and most promising in terms of GHG reduction.

Rice growth monitoring using simulated compact polarimetric C band SAR

NASA Astrophysics Data System (ADS)

Yang, Zhi; Li, Kun; Liu, Long; Shao, Yun; Brisco, Brian; Li, Weiguo

2014-12-01

In this study, a set of nine compact polarimetric (CP) images were simulated from polarimetric RADARSAT-2 data acquired over a test site containing two types of rice field in Jiangsu province, China. The types of rice field in the test site were (1) transplanted hybrid rice fields, and (2) direct-sown japonica rice fields. Both types have different yields and phenological stages. As a first step, the two types of rice field were distinguished with 94% and 86% accuracy respectively through analyzing CP synthetic aperture radar (SAR) observations and their behavior in terms of scattering mechanisms during the rice growth season. The focus was then on phenology retrieval for each type of rice field. A decision tree (DT) algorithm was built to fulfill the precise retrieval of rice phenological stages, in which seven phenological stages were discriminated. The key criterion for each phenological stage was composed of 1-4 CP parameters, some of which were first used for rice phenology retrieval and found to be very sensitive to rice phenological changes. The retrieval results were verified at parcel level for a set of 12 stands of rice and up to nine observation dates per stand. This gave an accuracy of 88-95%. Throughout the phenology retrieval process, only simulated CP data were used, without any auxiliary data. These results demonstrate the potential of CP SAR for rice growth monitoring applications.

Dry/Wet Cycles Change the Activity and Population Dynamics of Methanotrophs in Rice Field Soil

PubMed Central

Ma, Ke; Conrad, Ralf

2013-01-01

The methanotrophs in rice field soil are crucial in regulating the emission of methane. Drainage substantially reduces methane emission from rice fields. However, it is poorly understood how drainage affects microbial methane oxidation. Therefore, we analyzed the dynamics of methane oxidation rates, composition (using terminal restriction fragment length polymorphism [T-RFLP]), and abundance (using quantitative PCR [qPCR]) of methanotroph pmoA genes (encoding a subunit of particulate methane monooxygenase) and their transcripts over the season and in response to alternate dry/wet cycles in planted paddy field microcosms. In situ methane oxidation accounted for less than 15% of total methane production but was enhanced by intermittent drainage. The dry/wet alternations resulted in distinct effects on the methanotrophic communities in different soil compartments (bulk soil, rhizosphere soil, surface soil). The methanotrophic communities of the different soil compartments also showed distinct seasonal dynamics. In bulk soil, potential methanotrophic activity and transcription of pmoA were relatively low but were significantly stimulated by drainage. In contrast, however, in the rhizosphere and surface soils, potential methanotrophic activity and pmoA transcription were relatively high but decreased after drainage events and resumed after reflooding. While type II methanotrophs dominated the communities in the bulk soil and rhizosphere soil compartments (and to a lesser extent also in the surface soil), it was the pmoA of type I methanotrophs that was mainly transcribed under flooded conditions. Drainage affected the composition of the methanotrophic community only minimally but strongly affected metabolically active methanotrophs. Our study revealed dramatic dynamics in the abundance, composition, and activity of the various type I and type II methanotrophs on both a seasonal and a spatial scale and showed strong effects of dry/wet alternation cycles, which enhanced the attenuation of methane flux into the atmosphere. PMID:23770899

Using artificial neural network and satellite data to predict rice yield in Bangladesh

NASA Astrophysics Data System (ADS)

Akhand, Kawsar; Nizamuddin, Mohammad; Roytman, Leonid; Kogan, Felix; Goldberg, Mitch

2015-09-01

Rice production in Bangladesh is a crucial part of the national economy and providing about 70 percent of an average citizen's total calorie intake. The demand for rice is constantly rising as the new populations are added in every year in Bangladesh. Due to the increase in population, the cultivation land decreases. In addition, Bangladesh is faced with production constraints such as drought, flooding, salinity, lack of irrigation facilities and lack of modern technology. To maintain self sufficiency in rice, Bangladesh will have to continue to expand rice production by increasing yield at a rate that is at least equal to the population growth until the demand of rice has stabilized. Accurate rice yield prediction is one of the most important challenges in managing supply and demand of rice as well as decision making processes. Artificial Neural Network (ANN) is used to construct a model to predict Aus rice yield in Bangladesh. Advanced Very High Resolution Radiometer (AVHRR)-based remote sensing satellite data vegetation health (VH) indices (Vegetation Condition Index (VCI) and Temperature Condition Index (TCI) are used as input variables and official statistics of Aus rice yield is used as target variable for ANN prediction model. The result obtained with ANN method is encouraging and the error of prediction is less than 10%. Therefore, prediction can play an important role in planning and storing of sufficient rice to face in any future uncertainty.

The mobility of thiobencarb and fipronil in two flooded rice-growing soils.

PubMed

Doran, Gregory; Eberbach, Philip; Helliwell, Stuart

2008-08-01

The mobility of the rice pesticides thiobencarb (S-[(4-chlorophenyl) methyl] diethylcarbamothioate) and fipronil ([5-amino-3-cyano-1-[2,6-dichloro-4-(trifluoromethyl)phenyl]-4-[(trifluoromethyl)sulfinyl]pyrazole) were investigated in the glasshouse under flooded conditions using two Australian rice-growing soils. When using leakage rates of 10 mm day(-1), less than 20% of applied thiobencarb and fipronil remained in the water column after 10 days due to rapid transfer to the soil phase. Up to 70% and 65% of the applied thiobencarb and fipronil, respectively, were recovered from the 0-1 cm layer of soils. Only 5-7% of each pesticide was recovered from the 1-2 cm layer, and less than 2% was recovered from each 1 cm layer in the 2-10 cm region of the soils. Analysis of the water leaking from the base of the soil cores showed between 5-10% of the applied thiobencarb and between 10-20% of the applied fipronil leaching from the soil cores. The high levels of pesticide in the effluent was attributed to preferential flow of pesticide-laden water via soil macropores resulting from the wetting and drying process, worm holes and root channels.

Effect of Land Cover Type and Structure on Water Cycling Dynamics for Agricultural and Wetland Sites in the Sacramento/San Joaquin River Delta

NASA Astrophysics Data System (ADS)

Eichelmann, E.; Hemes, K. S.; Baldocchi, D. D.

2016-12-01

The Sacramento/San Joaquin river delta is an important source of fresh water for California. To reverse soil subsidence, which is linked to draining the natural wetlands for agriculture, parts of the Sacramento/San Joaquin river delta have been restored to managed wetlands. While these restored wetlands provide greenhouse gas benefits compared to agricultural use of the land, implications for the water balance of these ecosystems, specifically evapotranspiration, are not well known. Based on multiple years of eddy covariance measurements of water, CO2, and sensible energy fluxes we explored the water cycling dynamics for several sites under different land use covers in the Sacramento/San Joaquin river delta. We investigated four sites under agricultural use (rice, corn, and alfalfa crops and cow pasture) and three restored wetland sites of varying ages and structures to examine the influence of land cover type and structure on evapotranspiration, sensible energy flux, and water use efficiency. While the wetland and the rice sites are usually flooded for the majority of the year, the alfalfa, corn, and pasture sites have a water table that is maintained to be below ground level throughout the year. The three wetland sites also have different fractions of open water to vegetation, covering a gradient from very dense vegetation with no open water to a fairly open structure with large pools of open water. These differences in land cover (dry vs flooded and fraction of open water to vegetation) have an effect on the patterns of evapotranspiration on diurnal to annual timescales. Although the flooded sites (wetland sites and rice) tend to have larger annual evapotranspiration than the drained sites (cow pasture, alfalfa, and corn), the fraction of open water to vegetation affects the extend to which the flooded sites' evapotranspiration exceeds that of drained sites. On diurnal timescales, we found that flooded sites with a larger fraction of open water to vegetation have larger night time latent energy fluxes, especially during the first half of the night. In contrast, flooded sites with a lower open water fraction have lower night time latent energy fluxes which are comparable in magnitude to night time fluxes at drained sites.

Proteomic Techniques and Management of Flooding Tolerance in Soybean.

PubMed

Komatsu, Setsuko; Tougou, Makoto; Nanjo, Yohei

2015-09-04

Climate change is considered a major threat to world agriculture and food security. To improve the agricultural productivity and sustainability, the development of high-yielding stress-tolerant, and climate-resilient crops is essential. Of the abiotic stresses, flooding stress is a very serious hazard because it markedly reduces plant growth and grain yield. Proteomic analyses indicate that the effects of flooding stress are not limited to oxygen deprivation but include many other factors. Although many flooding response mechanisms have been reported, flooding tolerance mechanisms have not been fully clarified for soybean. There were limitations in soybean materials, such as mutants and varieties, while they were abundant in rice and Arabidopsis. In this review, plant proteomic technologies are introduced and flooding tolerance mechanisms of soybeans are summarized to assist in the improvement of flooding tolerance in soybeans. This work will expedite transgenic or marker-assisted genetic enhancement studies in crops for developing high-yielding stress-tolerant lines or varieties under abiotic stress.

Use of banker plant system for sustainable management of the most important insect pest in rice fields in China

PubMed Central

Zheng, Xusong; Lu, Yanhui; Zhu, Pingyang; Zhang, Facheng; Tian, Junce; Xu, Hongxing; Chen, Guihua; Nansen, Christian; Lu, Zhongxian

2017-01-01

To meet the World’s food demand, there is a growing need for sustainable pest management practices. This study describes the results from complementary laboratory and field studies of a “banker plant system” for sustainable management of the rice brown planthopper (BPH) (Nilaparvata lugens Stål) – the economically most important rice pest in Asian rice growing areas. The banker plant system consisted of planting a grass species, Leersia sayanuka, adjacent to rice fields. L. sayanuka is the host plant of a planthopper, Nilaparvata muiri. An egg parasitoid, Anagrus nilaparvatae, parasitizes eggs of both BPH and N. muiri, and its establishment and persistence are improved through plantings of L. sayanuka and thereby attraction of N. muiri. Laboratory results showed that BPH was unable to complete its life cycle on L. sayanuka, and N. muiri could not complete its life cycle on rice. Thus, planting L. sayanuka did not increase the risk of planthopper damage to rice fields. Field studies showed that BPH densities were significantly lower in rice fields with banker plant system compared to control rice fields without banker plant system. PMID:28367978

Use of banker plant system for sustainable management of the most important insect pest in rice fields in China.

PubMed

Zheng, Xusong; Lu, Yanhui; Zhu, Pingyang; Zhang, Facheng; Tian, Junce; Xu, Hongxing; Chen, Guihua; Nansen, Christian; Lu, Zhongxian

2017-04-03

To meet the World's food demand, there is a growing need for sustainable pest management practices. This study describes the results from complementary laboratory and field studies of a "banker plant system" for sustainable management of the rice brown planthopper (BPH) (Nilaparvata lugens Stål) - the economically most important rice pest in Asian rice growing areas. The banker plant system consisted of planting a grass species, Leersia sayanuka, adjacent to rice fields. L. sayanuka is the host plant of a planthopper, Nilaparvata muiri. An egg parasitoid, Anagrus nilaparvatae, parasitizes eggs of both BPH and N. muiri, and its establishment and persistence are improved through plantings of L. sayanuka and thereby attraction of N. muiri. Laboratory results showed that BPH was unable to complete its life cycle on L. sayanuka, and N. muiri could not complete its life cycle on rice. Thus, planting L. sayanuka did not increase the risk of planthopper damage to rice fields. Field studies showed that BPH densities were significantly lower in rice fields with banker plant system compared to control rice fields without banker plant system.

Rice Field Geochemistry and Hydrology: An Explanation for Why Groundwater Irrigated Fields in Bangladesh are Net Sinks of Arsenic from Groundwater

PubMed Central

Neumann, Rebecca B.; St. Vincent, Allison P.; Roberts, Linda C.; Badruzzaman, A. Borhan M.; Ali, M. Ashraf; Harvey, Charles F.

2011-01-01

Irrigation of rice fields in Bangladesh with arsenic-contaminated groundwater transfers tens of cubic kilometers of water and thousands of tons of arsenic from aquifers to rice fields each year. Here we combine observations of infiltration patterns with measurements of porewater chemical composition from our field site in Munshiganj Bangladesh to characterize the mobility of arsenic in soils beneath rice fields. We find that very little arsenic delivered by irrigation returns to the aquifer, and that recharging water mobilizes little, if any, arsenic from rice field subsoils. Arsenic from irrigation water is deposited on surface soils and sequestered along flow paths that pass through bunds, the raised soil boundaries around fields. Additionally, timing of flow into bunds limits the transport of biologically available organic carbon from rice fields into the subsurface where it could stimulate reduction processes that mobilize arsenic from soils and sediments. Together, these results explain why groundwater irrigated rice fields act as net sinks of arsenic from groundwater. PMID:21332196

Identification of transplanting stage of rice using Sentinel-1 data

NASA Astrophysics Data System (ADS)

Hongo, C.; Tosa, T.; Tamura, E.; Sigit, G.; Barus, B.

2017-12-01

As the adaptation of climate change, the Government of Indonesia has launched agricultural insurance program for damage of rice by drought, flood and pest and disease. For assessment of the damage ratio and calculation of indemnity, extraction of paddy field and identification of transplanting stage are key issues. In this research, we conducted identification of rice transplanting stage in dry season of 2015, using data from Sentinel-1, for paddy in Cianjur, West Java, Indonesia. As the first step, time series order of backscattering coefficient was analyzed about paddy, forest, villages and fish farming ponds with use of Sentinel-1 data acquired on April 1, April 13, April 25, May 7, May 19, June 24, July 18 and August 11. The result shows that the backscattering coefficient of paddy substantially decreased from data on May 7 and reached minimum value and then after increased toward June. A paddy area showing this change was almost the same area where rice was at harvesting stage and we did field investigation work from August 11 to 13. Considering a growth period of rice in our research site was about 110 days, so the result supported the fact that transplantation of rice was done around May 7. On the other hand, backscattering coefficient of forest, villages and fish farming ponds was constant and showed clear difference from the coefficient of paddy. As the next step, minimum and maximum value of backscattering coefficient were extracted from the data of May 7, May 19 and June 24, respectively. Then increase amount was calculated by deducting the minimum value from the maximum. Finally, using the minimum value of backscattering coefficient and the increased amount, a classification of image was made to identify transplanting stage through maximum likelihood method, decision tree method and threshold setting method (regression analysis by 3σ-rule). As the result, the maximum likelihood method made the most accurate distinguishment about transplanting stage while the decision tree method showed tendency to underestimate a paddy area already planted. As to the threshold setting method (regression analysis by 3σ-rule), its distinguishment accuracy was better than those of other methods about a paddy area adjacent to forest and villages of which backscattering coefficient was influenced by other sources' coefficients.

Unravelling trophic subsidies of agroecosystems for biodiversity conservation: food consumption and nutrient recycling by waterbirds in Mediterranean rice fields.

PubMed

Navedo, Juan G; Hahn, Steffen; Parejo, Manuel; Abad-Gómez, José M; Gutiérrez, Jorge S; Villegas, Auxiliadora; Sánchez-Guzmán, Juan M; Masero, José A

2015-04-01

Waterbirds can reallocate a considerable amount of nutrients within agricultural fields and between agriculture sites and wetlands. However their effects on biogeochemical cycles have rarely been quantified. We estimated bird numbers, diet (from stable isotope analysis), food supply, and the food consumption on rice fields by overwintering waterbirds in one of the most important areas for rice production in southwestern Europe and a key area for various migrating and resident waterbird species. Herein, we modelled the nutrient (N and P) recycling in rice fields, and their transport to reservoirs. The energy consumption by waterbirds (96,605±18,311 individuals) on rice fields during winter averaged at 89.9±39.0 kJ·m(-2), with its majority (89.9%) belonging to foraging on rice seeds. Thus, the birds removed about 26% of rice seeds leftover after harvest (estimated in 932.5±504.7 seeds·m(-2) in early winter) wherein common cranes and dabbling ducks (four species) were the most important consumers. Waterbirds foraging and roosting in the rice fields recycled more than 24.1 (1.0 kg·ha(-1)) of N and an additional 5.0 tons (0.2 kg·ha(-1)) of P in the Extremadura's rice fields during winter. Additionally, we estimated that 2.3 tons of N and 550 kg of P were removed from rice fields and transported to reservoirs. The seasonal foraging of wildlife should result in a direct benefit for rice farmers by improving nutrient recycling through defecation by waterbirds with respect to artificial fertilisation. Additionally, rice fields located in the cranes' core wintering areas can provide sufficient food supply to induce habitat shift from their traditional wintering habitat in 'dehesas' to rice fields, which causes indirect socioeconomic benefit through reduced acorn consumption by cranes. Our modelling approach may thus be especially helpful for management decisions regarding rice agroecosystems in areas which are also important for the conservation of migratory waterbirds. Copyright © 2014 Elsevier B.V. All rights reserved.

Impact of volunteer rice infestation on yield and grain quality of rice.

PubMed

Singh, Vijay; Burgos, Nilda R; Singh, Shilpa; Gealy, David R; Gbur, Edward E; Caicedo, Ana L

2017-03-01

Volunteer rice (Oryza sativa L.) grains may differ in physicochemical traits from cultivated rice, which may reduce the quality of harvested rice grain. To evaluate the effect of volunteer rice on cultivated rice, fields were surveyed in Arkansas in 2012. Cropping history that included hybrid cultivars in the previous two years (2010 and 2011) had higher volunteer rice infestation (20%) compared with fields planted previously with inbred rice (5.5%). The total grain yield of rice was reduced by 0.4% for every 1% increase in volunteer rice density. The grain quality did not change in fields planted with the same cultivar for three years. Volunteer rice density of at least 7.6% negatively impacted the head rice and when infestation reached 17.7%, it also reduced the rice grain yield. The protein and amylose contents of rice were not affected until volunteer rice infestation exceeded 30%. Crop rotation systems that include hybrid rice are expected to have higher volunteer rice infestation than systems without hybrid rice. It is predicted that, at 8% infestation, volunteer rice will start to impact head rice yield and will reduce total yield at 18% infestation. It could alter the chemical quality of rice grain at >30% infestation. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

Paddy-field contamination with 134Cs and 137Cs due to Fukushima Dai-ichi Nuclear Power Plant accident and soil-to-rice transfer coefficients.

PubMed

Endo, Satoru; Kajimoto, Tsuyoshi; Shizuma, Kiyoshi

2013-02-01

The transfer coefficient (TF) from soil to rice plants of (134)Cs and (137)Cs in the form of radioactive deposition from the Fukushima Dai-ichi Nuclear Power Plant (FDNPP) accident in March 2011 was investigated in three rice paddy fields in Minami-Soma City. Rice crops were planted in the following May and harvested at the end of September. Soil cores of 30-cm depth were sampled from rice-planted paddy fields to measure (134)Cs and (137)Cs radioactivity at 5-cm intervals. (134)Cs and (137)Cs radioactivity was also measured in rice ears (rice with chaff), straws and roots. The rice ears were subdivided into chaff, brown rice, polished rice and rice bran, and the (134)Cs and (137)Cs radioactivity concentration of each plant part was measured to calculate the respective TF from the soil. The TF of roots was highest at 0.48 ± 0.10 in the field where the (40)K concentration in the soil core was relatively low, in comparison with TF values of 0.31 and 0.38 in other fields. Similar trends could be found for the TF of whole rice plants, excluding roots. The TF of rice ears was relatively low at 0.019-0.026. The TF of chaff, rice bran, brown rice and polished rice was estimated to be 0.049, 0.10-0.16, 0.013-0.017 and 0.005-0.013, respectively. Copyright © 2012 Elsevier Ltd. All rights reserved.

Has dyke development in the Vietnamese Mekong Delta shifted flood hazard downstream?

NASA Astrophysics Data System (ADS)

Van Khanh Triet, Nguyen; Viet Dung, Nguyen; Fujii, Hideto; Kummu, Matti; Merz, Bruno; Apel, Heiko

2017-08-01

In the Vietnamese part of the Mekong Delta (VMD) the areas with three rice crops per year have been expanded rapidly during the last 15 years. Paddy-rice cultivation during the flood season has been made possible by implementing high-dyke flood defenses and flood control structures. However, there are widespread claims that the high-dyke system has increased water levels in downstream areas. Our study aims at resolving this issue by attributing observed changes in flood characteristics to high-dyke construction and other possible causes. Maximum water levels and duration above the flood alarm level are analysed for gradual trends and step changes at different discharge gauges. Strong and robust increasing trends of peak water levels and duration downstream of the high-dyke areas are found with a step change in 2000/2001, i.e. immediately after the disastrous flood which initiated the high-dyke development. These changes are in contrast to the negative trends detected at stations upstream of the high-dyke areas. This spatially different behaviour of changes in flood characteristics seems to support the public claims. To separate the impact of the high-dyke development from the impact of the other drivers - i.e. changes in the flood hydrograph entering the Mekong Delta, and changes in the tidal dynamics - hydraulic model simulations of the two recent large flood events in 2000 and 2011 are performed. The hydraulic model is run for a set of scenarios whereas the different drivers are interchanged. The simulations reveal that for the central VMD an increase of 9-13 cm in flood peak and 15 days in duration can be attributed to high-dyke development. However, for this area the tidal dynamics have an even larger effect in the range of 19-32 cm. However, the relative contributions of the three drivers of change vary in space across the delta. In summary, our study confirms the claims that the high-dyke development has raised the flood hazard downstream. However, it is not the only and not the most important driver of the observed changes. It has to be noted that changes in tidal levels caused by sea level rise in combination with the widely observed land subsidence and the temporal coincidence of high water levels and spring tides have even larger impacts. It is recommended to develop flood risk management strategies using the high-dyke areas as retention zones to mitigate the flood hazard downstream.

Waterbird nest density and nest survival in rice fields of southwestern Louisiana

USGS Publications Warehouse

Pierluissi, S.; King, Sammy L.; Kaller, Michael D.

2010-01-01

Rice fields in southwestern Louisiana provide breeding habitat for several waterbird species; however, little is known about nest density, nest survival and the importance of landscape context of rice fields in determining breeding activity. In 2004, 42 rice fields were searched for nests, and 40 were searched in 2005. Land uses surrounding rice fields, including irrigation canals, trees, crawfish ponds, rice, fallow and soybean fields, were examined to determine influence on nest density and survival. Nest densities were 13.5-16.0 nests/km2 for Purple Gallinules (Porphyrio martinica), 3.0-13.7 nests/km2 for Fulvous Whistling Ducks (Dendrocygna bicolor), 2.6-2.8 nests/km2 for Common Moorhens (Gallinula chloropus), 0.3-0.92 nests/km2 for Least Bitterns (Ixobrychus exilisi) and 0-0.6 nests/km2 for Mottled Ducks (Anas fulvigula). Nest survival was 52-79% for Purple Gallinules and 39-43% for Fulvous Whistling Ducks. Apparent nest success of Common Moorhens was 73-75%, 83% for Least Bitterns and 33% for Mottled Ducks. Purple Gallinule and Common Moorhen nest densities were highest in fields with a larger proportion of irrigation canals surrounding rice fields. Purple Gallinule nest densities were greater in fields devoid of trees and landscapes dominated by rice fields and pasture, rather than landscapes containing soybean fields and residential areas. Fulvous Whistling Duck nest densities were higher in agriculturally-dominated landscapes with few trees.

Arsenic accumulation in rice: Consequences of rice genotypes and management practices to reduce human health risk.

PubMed

Islam, Shofiqul; Rahman, Mohammad Mahmudur; Islam, M R; Naidu, Ravi

2016-11-01

Rice is an essential staple food and feeds over half of the world's population. Consumption of rice has increased from limited intake in Western countries some 50years ago to major dietary intake now. Rice consumption represents a major route for inorganic arsenic (As) exposure in many countries, especially for people with a large proportion of rice in their daily diet as much as 60%. Rice plants are more efficient in assimilating As into its grains than other cereal crops and the accumulation may also adversely affect the quality of rice and their nutrition. Rice is generally grown as a lowland crop in flooded soils under reducing conditions. Under these conditions the bioavailability of As is greatly enhanced leading to excessive As bioaccumulation compared to that under oxidizing upland conditions. Inorganic As species are carcinogenic to humans and even at low levels in the diet pose a considerable risk to humans. There is a substantial genetic variation among the rice genotypes in grain-As accumulation as well as speciation. Identifying the extent of genetic variation in grain-As concentration and speciation of As compounds are crucial to determining the rice varieties which accumulate low inorganic As. Varietal selection, irrigation water management, use of fertilizer and soil amendments, cooking practices etc. play a vital role in reducing As exposure from rice grains. In the meantime assessing the bioavailability of As from rice is crucial to understanding human health exposure and reducing the risk. Copyright © 2016 Elsevier Ltd. All rights reserved.

Waste rice seed in conventional and stripper-head harvested fields in California: Implications for wintering waterfowl

USGS Publications Warehouse

Fleskes, Joseph P.; Halstead, Brian J.; Casazza, Michael L.; Coates, Peter S.; Kohl, Jeffrey D.; Skalos, Daniel A.

2012-01-01

Waste rice seed is an important food for wintering waterfowl and current estimates of its availability are needed to determine the carrying capacity of rice fields and guide habitat conservation. We used a line-intercept method to estimate mass-density of rice seed remaining after harvest during 2010 in the Sacramento Valley (SACV) of California and compared results with estimates from previous studies in the SACV and Mississippi Alluvial Valley (MAV). Posterior mean (95% credible interval) estimates of total waste rice seed mass-density for the SACV in 2010 were 388 (336–449) kg/ha in conventionally harvested fields and 245 (198–307) kg/ha in stripper-head harvested fields; the 2010 mass-density is nearly identical to the mid-1980s estimate for conventionally harvested fields but 36% lower than the mid-1990s estimate for stripped fields. About 18% of SACV fields were stripper-head harvested in 2010 vs. 9–15% in the mid-1990s and 0% in the mid-1980s; but due to a 50% increase in planted rice area, total mass of waste rice seed in SACV remaining after harvest in 2010 was 43% greater than in the mid-1980s. However, total mass of seed-eating waterfowl also increased 82%, and the ratio of waste rice seed to seed-eating waterfowl mass was 21% smaller in 2010 than in the mid-1980s. Mass-densities of waste rice remaining after harvest in SACV fields are within the range reported for MAV fields. However, because there is a lag between harvest and waterfowl use in the MAV but not in the SACV, seed loss is greater in the MAV and estimated waste seed mass-density available to wintering waterfowl in SACV fields is about 5–30 times recent MAV estimates. Waste rice seed remains an abundant food source for waterfowl wintering in the SACV, but increased use of stripper-head harvesters would reduce this food. To provide accurate data on carrying capacities of rice fields necessary for conservation planning, trends in planted rice area, harvest method, and postharvest field treatment should be tracked and impacts of postharvest field treatment and other farming practices on waste rice seed availability should be investigated.

Comparative study of irrigation water use and groundwater recharge under various irrigation schemes in an agricultural region, central Taiwan

NASA Astrophysics Data System (ADS)

Chen, Shih-Kai; Jang, Cheng-Shin; Tsai, Cheng-Bin

2016-04-01

The risk of rice production has increased notably due to climate change in Taiwan. To respond to growing agricultural water shortage without affecting normal food production in the future, the application of water-saving irrigation will be a substantial resolution. However, the adoption of water-saving irrigation may result in the reducing of groundwater recharge because continuous flooding in the paddy fields could be regarded as an important source for groundwater recharge. The aim of this study was to evaluate the irrigation water-saving benefit and groundwater recharge deficit when adopting the System of Rice Intensification, known as SRI methodology, in the Choushui River alluvial fan (the largest groundwater pumping and the most important rice-cropping region in central Taiwan). The three-dimensional finite element groundwater model, FEMWATER, was applied to simulate the infiltration process and groundwater recharge under SRI methodology and traditional irrigation schemes including continuous irrigation, and rotational irrigation in two rice-crop periods with hydro-climatic data of 2013. The irrigation water use was then calculated by water balance. The results showed that groundwater recharge amount of SRI methodology was slightly lower than those of traditional irrigation schemes, reduced 3.6% and 1.6% in the first crop period, and reduced 3.2% and 1.6% in the second crop period, compared with continuous irrigation and rotational irrigation, respectively. However, the SRI methodology achieved notably water-saving benefit compared to the disadvantage of reducing the groundwater recharge amount. The field irrigation requirement amount of SRI methodology was significantly lower than those of traditional irrigation schemes, saving 37% and 20% of irrigation water in the first crop period, and saving 53% and 35% in the second crop period, compared with continuous irrigation and rotational irrigation, respectively. Therefore, the amount of groundwater pumping for irrigation water use can be reduced when adopting the SRI methodology in the future. The reducing of groundwater recharge could be supplemented by using 1,500 hectares of fallow paddy fields, located at proximal-fan region, as recharge pools in the wet season. The adoption of water-saving irrigation would be helpful for the relevant government agency to formulate the integral water resource management strategies in this region. Keywords:Groundwater recharge, SRI, FEMWATER, Field irrigation requirement

Transpiration Driven Hydrologic Transport in vegetated shallow water environments: Implications on Diel and Seasonal Soil Biogeochemical Processes and System Management

NASA Astrophysics Data System (ADS)

Bachand, P.; Bachand, S. M.; Fleck, J.; Anderson, F.

2011-12-01

Hydrology arguably plays the most important role in biogeochemical cycling of mercury in wetlands and other shallow aquatic systems. CFSTR, PFR and non-ideal reactor models are oftentimes currently used to hydrologically assess these systems and to account for the fate, transport and cycling of constituents of concern (COC) with systems assumed to be non-leaky and with diffusion dominating soil transport. Yet a number of results in the literature imply transpiration drives soil transport: transpiration into the root zone is in the range of 50 - 75% of ET seasonally; gaseous emissions from aquatic systems show a diel pattern that tracks diel ET patterns; in long detention time aquatic systems ET is the largest sink for applied surface waters; and non-reactive tracers when applied to surface waters can find themselves in the root zone and within plants. All these findings strongly suggest transpiration driven infiltration into the root zone, is a significant hydrologic pathway for constituents and is an important transport mechanism. This paper examines the annual water budget for four shallow aquatic land uses in the Yolo Bypass, California: rice, wild rice, fallowed fields and wetlands. Results indicate that differences in hydrology between the fields, particularly the temporal nature of transpiration, play a significant role in mercury transformations and transport. During the irrigation period, fallowed fields discharged 6 cm of surface water (15% applied water), rice fields 31 - 43 cm (27 - 31% applied water), and wild rice fields 16 - 39 cm (15 - 31% applied water). Evapotranspiration rates were in the range of 120 - 130 cm/y for all land uses (i.e. rice, wild rice, fallowed fields and seasonal wetlands) except for the permanent wetland which was about 1/3 higher at about 170 cm/y. During the summer, approximately 50% of the applied surface water was drawn into the root zone to meet transpiration demands. Based upon results from our water budget and utilizing modified Peclet No. calculations, we quantified the relative importance of upward diffusion from the sediments and downward advection from transpiration as hydrologic transport mechanisms in the root zone. Transpiration driven infiltration moves water past the diffusive zone within 1 - 2 days in this system during the summer months. With the waning seasons, evapotranspiration diminishes until by winter diffusion dominates throughout the entire root zone. This model has great implications on the analyses of soil biogeochemical process in the root zone of shallow aquatic systems. Downward advection is a major transport mechanism into the root zone of shallow flooded aquatic systems and provides an important physical mechanism that drives variability in the seasonal and diel storage; release and cycling of COCs; and the creation of both a physical and chemical barrierd to upward diffusion of soil-borne COCs into the water column. Models that do not account for root zone interactions may not be able to capture diel and seasonal differences. Moreover, these interactions may lead to unanticipated environmental consequences as a result of cultural practices.

Potential effects of drought on carrying capacity for wintering waterfowl in the Central Valley of California

USGS Publications Warehouse

Petrie, Mark J.; Fleskes, Joseph P.; Wolder, Mike A.; Isola, Craig R.; Yarris, Gregory S.; Skalos, Daniel A.

2016-01-01

We used the bioenergetics model TRUEMET to evaluate potential effects of California's recent drought on food supplies for waterfowl wintering in the Central Valley under a range of habitat and waterfowl population scenarios. In nondrought years in the current Central Valley landscape, food supplies are projected to be adequate for waterfowl from fall through early spring (except late March) even if waterfowl populations reach North American Waterfowl Management Plan goals. However, in all drought scenarios that we evaluated, food supplies were projected to be exhausted for ducks by mid- to late winter and by late winter or early spring for geese. For ducks, these results were strongly related to projected declines in winter-flooded rice fields that provide 45% of all the food energy available to ducks in the Central Valley in nondrought water years. Delayed flooding of some managed wetlands may help alleviate food shortages by providing wetland food resources better timed with waterfowl migration and abundance patterns in the Central Valley, as well as reducing the amount of water needed to manage these habitats. However, future research is needed to evaluate the impacts of delayed flooding on waterfowl hunting, and whether California's existing water delivery system would make delayed flooding feasible. Securing adequate water supplies for waterfowl and other wetland-dependent birds is among the greatest challenges facing resource managers in coming years, especially in the increasingly arid western United States.

Polychlorinated dibenzo-p-dioxins, dibenzofurans, and dioxin-like polychlorinated biphenyls in rice straw smoke and their origins in Japan.

PubMed

Minomo, Kotaro; Ohtsuka, Nobutoshi; Nojiri, Kiyoshi; Hosono, Shigeo; Kawamura, Kiyoshi

2011-08-01

Polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs), and dioxin-like polychlorinated biphenyls (DL-PCBs) contained in the smoke generated from rice straw burning in post-harvest paddy fields in Japan were analyzed to determine their congener profiles. Both the apportionment of toxic equivalent (TEQ) by using indicative congeners and the comparison of the homolog profiles showed that the PCDDs/PCDFs/DL-PCBs present in the rice-straw smoke were greatly influenced by those present as impurities in pentachlorophenol (PCP) and chlornitrofen (CNP, 4-nitrophenyl-2,4,6-trichlorophenyl ether) formulations that had been widely used as herbicides in paddy fields in Japan. Further, in order to investigate the effects of paddy-field soil on the PCDDs/PCDFs/DL-PCBs present in rice-straw smoke, PCDD/PCDF/DL-PCB homolog profiles of rice straw, rice-straw smoke and paddy-field soil were compared. Rice-straw smoke was generated by burning rice straw on a stainless-steel tray in a laboratory. The results suggested that the herbicides-originated PCDDs/PCDFs/DL-PCBs and the atmospheric PCDDs/PCDFs/DL-PCBs contributed predominantly to the presence of PCDDs/PCDFs/DL-PCBs in the rice-straw smoke while the contribution of PCDDs/PCDFs/DL-PCBs formed during rice straw burning was relatively minimal. The major sources of the PCDDs/PCDFs/DL-PCBs found in the rice-straw smoke were attributed primarily to the paddy-field soil adhered to the rice straw surface and secondarily to the air taken by the rice straw. The principal component analysis supported these conclusions. It is concluded that rice straw burning at paddy fields acts as a driving force in the transfer of PCDDs/PCDFs/DL-PCBs from paddy-field soil to the atmosphere. Copyright © 2011 Elsevier Ltd. All rights reserved.

Dissolved carbon and nitrogen dynamics in paddy fields under different water management practices and implications on green-house gas emissions

NASA Astrophysics Data System (ADS)

Miniotti, Eleonora; Said-Pullicino, Daniel; Bertora, Chiara; Pelissetti, Simone; Sacco, Dario; Grignani, Carlo; Lerda, Cristina; Romani, Marco; Celi, Luisella

2013-04-01

The alternation of oxidizing and reducing conditions in paddy soils results in considerable complexity in the biogeochemical cycling of elements and their interactions, influencing important soil processes. Water management practices may play an important role in controlling the loss of nutrients from rice paddies to surface and subsurface waters, as well as soil organic matter (SOM) stabilization and the emission of green-house gases (GHG) such as methane and nitrous oxide. The aim of this study was therefore to evaluate the interaction between changes in soil redox conditions and element cycling in temperate paddy soils as a function of different water management practices. The research was carried out within an experimental platform (1.2 ha) located at the Rice Research Center of Ente Nazionale Risi (Castello d'Agogna, PV, NW Italy) where three water management practices are being compared with two plots for each treatment. These included (i) rice cultivation under traditional submerged conditions (FLD); (ii) seeding under dry soil conditions and flooding delayed by about 40 days (DRY); (iii) seeding under dry soil conditions and rotational irrigation (IRR). Surface and subsurface (25, 50 and 75 cm) water samples were collected at regular intervals over the cropping season from V-notch weirs and porous ceramic suction cups installed in each plot, and subsequently analyzed for DOC, SUVA, Fe(II), ammonium and nitrate-N. Moreover, methane and nitrous oxide fluxes were measured in situ by the closed-chamber technique. DOC concentrations in soil solutions were generally higher in FLD and DRY treatments with respect to IRR throughout the cropping season. Higher DOC contents after field flooding in FLD and DRY treatments also corresponded with greater concentrations of reduced Fe, higher SUVA values, lower Eh values and higher pH values, suggesting that desorption of more aromatic, mineral-associated SOM could be responsible for the observed increase in DOC. These trends were not observed in the IRR treatment. The differences in DOC contents and in Eh trend between treatments could possibly explain the increasing trend in cumulative methane emissions in the order IRR<

Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice.

PubMed

Ayano, Madoka; Kani, Takahiro; Kojima, Mikiko; Sakakibara, Hitoshi; Kitaoka, Takuya; Kuroha, Takeshi; Angeles-Shim, Rosalyn B; Kitano, Hidemi; Nagai, Keisuke; Ashikari, Motoyuki

2014-10-01

Under flooded conditions, the leaves and internodes of deepwater rice can elongate above the water surface to capture oxygen and prevent drowning. Our previous studies showed that three major quantitative trait loci (QTL) regulate deepwater-dependent internode elongation in deepwater rice. In this study, we investigated the age-dependent internode elongation in deepwater rice. We also investigated the relationship between deepwater-dependent internode elongation and the phytohormone gibberellin (GA) by physiological and genetic approach using a QTL pyramiding line (NIL-1 + 3 + 12). Deepwater rice did not show internode elongation before the sixth leaf stage under deepwater condition. Additionally, deepwater-dependent internode elongation occurred on the sixth and seventh internodes during the sixth leaf stage. These results indicate that deepwater rice could not start internode elongation until the sixth leaf stage. Ultra-performance liquid chromatography tandem mass-spectrometry (UPLC-MS/MS) method for the phytohormone contents showed a deepwater-dependent GA1 and GA4 accumulation in deepwater rice. Additionally, a GA inhibitor abolished deepwater-dependent internode elongation in deepwater rice. On the contrary, GA feeding mimicked internode elongation under ordinary growth conditions. However, mutations in GA biosynthesis and signal transduction genes blocked deepwater-dependent internode elongation. These data suggested that GA biosynthesis and signal transduction are essential for deepwater-dependent internode elongation in deepwater rice. © 2014 The Authors. Plant, Cell & Environment published by John Wiley & Sons Ltd.

Transfer function control strategy of Subak rice field land and agricultural development in Denpasar city

NASA Astrophysics Data System (ADS)

Lanya, Indayati; Netera Subadiyasa, N.; Sardiana, Ketut; Putu Ratna Adi, Gst.

2017-01-01

The success of tourism development in Bali gave a negative impact on Subak rice fields, especially on land convertion over 2579 ha year-1 (2002-2013) to the area awakened. Denpasar city has lost rice fields 185 ha year-1 and six Subak, as well as potentially losing 10 Subak, as a result of the allocation of space in the region in the Spatial Planing. UNESCO, in 2012 the establishment of Subak as a cultural heritage. Most Subak rice fields designated as an Urban Green Open Space ( UGOS). Satellite image Iconos 2002, World 2015 View Coverage of Denpasar, and ArcGIS 10.3 software used for mapping the balance of rice field and violation of land use in the area of UGOS. The control strategy over the convertion of spatial land-based environment is done through zoning map. Land conversion of rice fields for 13 years (2002-2015) in Denpasar (572.76 ha), comes standard acreage of rice fields in 2015. Denpasar city has experienced of food deficits, even in the UGOS has awakened 96.04 ha (24.04 ha year-1). A period of 50 years into the future, rice fields which needs to be protected 872.83 ha, buffer area 984.77 ha, and can be converted 499.81 ha.

Saugus River and Tributaries, Lynn Malden, Revere and Saugus, Massachusetts. Flood Damage Reduction. Volume 6. Appendix I. Planning Correspondence: Lynn, Malden, Revere, Saugus, Interest Groups, and News Articles

DTIC Science & Technology

1989-06-01

Development Representative Alfred 9. Saggesse Mabel Voodcock Robert Fox Fred Milton G73 PINES RIVERSIDE ASSOCIATION REVERE, MASSACHUSETTS 02151 April...28 Rice Ave. Revere, Massachusetts 02151 Dear Mr. Piccinni: I appreciate your willingness to sit on the Citizens’ Steering Comittee for the Saugus...Pint t/ nej sack 6 I 9nc. 2S RICE AVENUE, REVERE, MASS. 02151 Telephone 284-9717 Mr. Joseph L. Ignazio March 30, 1987 Chief, Planning Division New

Mercury Cycling in Agricultural and Non-agricultural Wetlands in the Yolo Bypass Wildlife Area, California: Water Column Processes

NASA Astrophysics Data System (ADS)

Fleck, J. A.; Alpers, C. N.; Downing, B. D.; Saraceno, J.; Stephenson, M.; Aiken, G. R.; Bergamaschi, B. A.; Stricker, C.

2007-12-01

Organic matter (OM) plays a significant role in mercury (Hg) cycling. For instance, aromatic dissolved OM can enhance Hg solubility leading to greater cycling in the water column whereas bioavailable forms of OM may enhance Hg methylation by increasing the microbial activity of Hg-methylating bacteria. Differences in wetland management (e.g. fertilization, plant residue, water depth and movement) can influence the character of OM within the wetland, thus affecting Hg cycling as well. This study is investigating the role of OM in Hg cycling over a wide range of time scales and wetland management practices within the Yolo Bypass Wildlife Area, near Sacramento, California. We are comparing Hg and methylmercury (MeHg) concentrations in the water columns of three agricultural field types (wild rice, white rice, and shallow-flooded fallow) with those in two non-agricultural field types (seasonal and permanent wetlands). The time scales over which variations in Hg and MeHg concentrations are being investigated range from diurnal variations caused by fluctuations in photolytic reactions and microbial activity to seasonal variations caused by plant growth, land management, climate, and fertilization. We relate those concentration fluctuations to the dominant processes affecting OM cycling in the fields. We further evaluate the possible influence of S-bearing fertilizers, such as ammonium sulfate and zinc sulfate, on Hg methylation because of the role that sulfur plays in Hg cycling and Hg-OM interactions. Preliminary results indicate that dissolved OM (DOM) concentrations (operationally defined using a filter with 0.45 ìm pore diameter) increased from 9 milligrams of carbon per liter (mg-C/L) at inflow stations to as high as 30 mg-C/L within the water column of the wetlands. Based on measured optical properties, OM in these wetlands appears to be derived from a mixture of algal activity, plant exudates, and diffusion from the flooded soils, with the proportion of each source dependent on land use. Concurrent rise in both the Hg concentration (from 14 ng/L to 50 ng/L) and the fraction of Hg in the dissolved fraction (from 15 to 50 percent, based on filtration with 0.45 ìm pore diameter filters) mirrors the increase in DOM concentration, suggesting the importance of Hg-DOM complexation. Measurements of optical properties and field parameters taken at 15-minute intervals over a diurnal cycle indicate that conditions in the rice fields fluctuate greatly through the day, with dissolved oxygen dropping from 14 mg/L in the afternoon to 2 mg/L at dawn. Extreme and systematic fluctuations also were observed for other water properties, including spectrometric indicators of OM character. Further analysis of water quality constituents and their relation to Hg and MeHg cycling in these wetlands will be presented.

Methane Dynamics in Flooded Lands

EPA Science Inventory

Methane (CH4) is the second most important anthropogenic greenhouse gas with a heat trapping capacity 34 times greater than that of carbon dioxide on a100 year time scale. Known anthropogenic CH4 sources include livestock production, rice agriculture, landfills, and natural gas m...

[Ecological characteristics of phytoplankton in waters of biological-controlling and ordinary rice fields].

PubMed

Liu, W; Wang, Y; Xu, R

2001-02-01

Through investigations from March to June 1998 on the phytoplankton in waters of biological-controlled and ordinary rice fields, 112 species of phytoplankton were found, of which, Bacillariophyta, Euglenophyta and Chlorophyta were dominant. The comparison of the species in two rice fields showed that in biological-controlled rice field, there were more species of Euglenophyta, with 5 most dominant species, i.e., 2 of Euglenophyta, 2 of Bacillariophyta and 1 of Chlorophyta. In ordinary rice field, there were more Bacillariophyta species, in which, 5 most dominant species belonged to Bacillariophyta, except Scenedesmus bijuga to Chlorophyta. The biodiversities of phytoplankton and their evennesses were also analyzed with the period from the seedlings being planted to the rice fields being dried, showing that a little increase in their biodiversity mainly caused by the increase of species number and an evident decrease in their evennesses.

Estimating shorebird populations during spring stopover in rice fields of the Louisiana and Texas Gulf Coastal Plain

USGS Publications Warehouse

Norling, Wayne; Jeske, Clinton W.; Thigpen, Tyler F.; Chadwick, Paul C.

2012-01-01

Migrating shorebird populations using approximately 2% of Louisiana and Texas Gulf Coastal rice fields were surveyed during spring migration (March–May of 1997 and 1998) using biweekly stratified random surveys conducted at 50 roadside survey points and approximately 30,000 shorebirds were observed. Shorebird counts were extrapolated and almost 1.4 million birds in 1997 and over 1.6 million birds of 31 species in 1998 were estimated to use rice field habitat for stopover sites in Louisiana and Texas. Greater than 50% of the estimated North American populations were estimated to use rice field habitats for five species, including a species of concern, Buff-breasted Sandpiper (Tryngites subruficollis) at 187%. Because of predictability of suitable rice field habitat acreage, timing of field preparation and water availability, coastal rice prairies are identified as critical spring migration stopover sites.

Rice Production Vulnerability to Climate Change in Indonesia: An Overview on Community-based Adaptation

NASA Astrophysics Data System (ADS)

Komaladara, A. A. S. P.; Budiasa, I. W.; Ambarawati, I. G. A. A.

2015-12-01

Rice remains to be a major crop and staple food in Indonesia. The task to ensure that rice production meets the demand of a growing population continues to engage the attention of national planners and policy makers. However, the adverse effects of climate change on agriculture production have presented Indonesia with yet another significant challenge. The exposure of rice crops to climate-related hazards such as temperature stress, floods, and drought, may lead to lower yield and self-sufficiency rate. This study explores the vulnerability of rice production to the effects of climate change in Indonesia. Considering the vast geographical span of the country and varying exposure, sensitivity, and adaptive capacity to climate change at regional level, this study emphasize the importance of community-based adaptation. Results from a simulation based on production and climate data from 1984 to 2014 indicates that rice production is sensitive to variation in growing season temperature and precipitation. A projection of these climate factors in 2050 has a significant impact on the major rice crop. To manage the impact of climate change, this study turns to the potential roles of farmer organizations, such as Subak, in adaptation strategies. The Subak in Bali is recognized for its cultural and organizational framework that highlights the sharing of knowledge and local wisdom in rice production. This is demonstrated by its efficient community-based irrigation management system, leading to sustainable rice production. Keywords: rice production, climate change, community-based adaptation, Indonesia

Lead in rice: analysis of baseline lead levels in market and field collected rice grains.

PubMed

Norton, Gareth J; Williams, Paul N; Adomako, Eureka E; Price, Adam H; Zhu, Yongguan; Zhao, Fang-Jie; McGrath, Steve; Deacon, Claire M; Villada, Antia; Sommella, Alessia; Lu, Ying; Ming, Lei; De Silva, P Mangala C S; Brammer, Hugh; Dasgupta, Tapash; Islam, M Rafiqul; Meharg, Andrew A

2014-07-01

In a large scale survey of rice grains from markets (13 countries) and fields (6 countries), a total of 1578 rice grain samples were analysed for lead. From the market collected samples, only 0.6% of the samples exceeded the Chinese and EU limit of 0.2 μg g(-1) lead in rice (when excluding samples collected from known contaminated/mine impacted regions). When evaluating the rice grain samples against the Food and Drug Administration's (FDA) provisional total tolerable intake (PTTI) values for children and pregnant women, it was found that only people consuming large quantities of rice were at risk of exceeding the PTTI from rice alone. Furthermore, 6 field experiments were conducted to evaluate the proportion of the variation in lead concentration in rice grains due to genetics. A total of 4 of the 6 field experiments had significant differences between genotypes, but when the genotypes common across all six field sites were assessed, only 4% of the variation was explained by genotype, with 9.5% and 11% of the variation explained by the environment and genotype by environment interaction respectively. Further work is needed to identify the sources of lead contamination in rice, with detailed information obtained on the locations and environments where the rice is sampled, so that specific risk assessments can be performed. Copyright © 2014 Elsevier B.V. All rights reserved.

Estimating high mosquito-producing rice fields using spectral and spatial data

NASA Technical Reports Server (NTRS)

Wood, B. L.; Beck, L. R.; Washino, R. K.; Hibbard, K. A.; Salute, J. S.

1992-01-01

The cultivation of irrigated rice provides ideal larval habitat for a number of anopheline vectors of malaria throughout the world. Anopheles freeborni, a potential vector of human malaria, is associated with the nearly 240,000 hectares of irrigated rice grown annually in Northern and Central California; therefore, this species can serve as a model for the study of rice field anopheline population dynamics. Analysis of field data revealed that rice fields with early season canopy development, that are located near bloodmeal sources (i.e., pastures with livestock) were more likely to produce anopheline larvae than fields with less developed canopies located further from pastures. Remote sensing reflectance measurements of early-season canopy development and geographic information system (GIS) measurements of distanes between rice fields and pastures with livestock were combined to distinguish between high and low mosquito-producing rice fields. Using spectral and distance measures in either a discriminant or Bayesian analysis, the identification of high mosquito-producing fields was made with 85 percent accuracy nearly two months before anopheline larval populations peaked. Since omission errors were also minimized by these approaches, they could provide a new basis for directing abatement techniques for the control of malaria vectors.

Impact of spatial plan on the conversion of Subak rice fields and food security, in Badung and Gianyar Regencies, Bali Province

NASA Astrophysics Data System (ADS)

Lanya, Indayati; Netera Subadiyasa, N.; Ratna Adi, Gst. P.

2018-05-01

Regional Spatial Plan of Bali Province 2009-2029, allocating rice fields can be converted 10% (± 10.800 ha). Over the next 20 years, the conversion of rice field is permitted 540 ha year-1, the real condition in Bali is 800 ha year-1.Research location in Badung and Gianyar Regencies. Visual satellite image interpretation methods, digitization of on-screen, delineation of subak rice field, field survey, superimpose analysis of Spatial Plan (SP) map with rice field map, trough toolbox-analysis tools–overlay-intersect using QGIS, Harvest Index (HI) of cropping pattern in one year. SP has a negative impact on agricultural land resources and food security. Local Regulation (SP), subak rice fields outside the agricultural area licensed to be converted, and food deficits. Regency of Badung, potential land conversion of 3,324.97 ha (34.44%) from 119 subak with paddy field area of 24,184.85 ha. There are 10 subak 100% and 8 subak > 95% can be converted; projected food deficit -115.343 tons of rice by 2020 for HI 2. In Gianyar Regency, potential land conversion 13,021.41 ha (53.51%) of 66 subak with an area of 24184.85 ha; 8 subak 100% and 8 subak with area < 5 ha can be converted; projected food deficit is about -194438 tons of rice in 2040 for HI 2.

Release of dissolved cadmium and sulfur nanoparticles from oxidizing sulfide minerals

EPA Science Inventory

Cadmium enrichment (relative to Fe and Zn) in paddy rice grain occurs during the pre-harvest drainage of flooded soil, which causes oxidative dissolution of sulfide minerals present in reduced soil. We investigated this process over a range of environmentally realistic Cdcontain...

Effects of Bt-transgenic rice cultivation on planktonic communities in paddy fields and adjacent ditches.

PubMed

Liu, Yongbo; Liu, Fang; Wang, Chao; Quan, Zhanjun; Li, Junsheng

2016-09-15

The non-target effects of transgenic plants are issues of concern; however, their impacts in cultivated agricultural fields and adjacent natural aquatic ecosystems are poorly understood. We conducted field experiments during two growing seasons to determine the effects of cultivating Bacillus thuringiensis (Bt)-transgenic rice on the phytoplankton and zooplankton communities in a paddy field and an adjacent ditch. Bt toxin was detected in soil but not in water. Water quality was not significantly different between non-Bt and Bt rice fields, but varied among up-, mid- and downstream locations in the ditch. Cultivation of Bt-transgenic rice had no effects on zooplankton communities. Phytoplankton abundance and biodiversity were not significantly different between transgenic and non-transgenic rice fields in 2013; however, phytoplankton were more abundant in the transgenic rice field than in the non-transgenic rice field in 2014. Water quality and rice type explained 65.9% and 12.8% of this difference in 2014, respectively. Phytoplankton and zooplankton were more abundant in mid- and downstream, than upstream, locations in the ditch, an effect that we attribute to water quality differences. Thus, the release of Bt toxins into field water during the cultivation of transgenic crops had no direct negative effects on plankton community composition, but indirect effects that alter environmental conditions should be taken into account during the processes of management planning and policymaking. Copyright © 2016 Elsevier B.V. All rights reserved.

Development of temporary subtropical wetlands induces higher gas production

PubMed Central

Canterle, Eliete B.; da Motta Marques, David; Rodrigues, Lúcia R.

2013-01-01

Temporary wetlands are short-term alternative ecosystems formed by flooding for irrigation of areas used for rice farming. The goal of this study is to describe the development cycle of rice fields as temporary wetlands in southern Brazil, evaluating how this process affect the gas production (CH4 and CO2) in soil with difference % carbon and organic matter content. Two areas adjacent to Lake Mangueira in southern Brazil were used during a rice-farming cycle. One area had soil containing 1.1% carbon and 2.4% organic matter, and the second area had soil with 2.4% carbon and 4.4% organic matter. The mean rates of gas production were 0.04 ± 0.02 mg CH4 m−2 d−1 and 1.18 ± 0.30 mg CO2 m−2 d−1 in the soil area with the lower carbon content, and 0.02 ± 0.03 mg CH4 m−2 d−1 and 1.38 ± 0.41 mg CO2 m−2 d−1 in the soil area with higher carbon content. Our results showed that mean rates of CO2 production were higher than those of CH4 in both areas. No statistically significant difference was observed for production of CH4 considering different periods and sites. For carbon dioxide (CO2), however, a Two-Way ANOVA showed statistically significant difference (p = 0.05) considering sampling time, but no difference between areas. The results obtained suggest that the carbon and organic matter contents in the soil of irrigated rice cultivation areas may have been used in different ways by soil microorganisms, leading to variations in CH4 and CO2 production. PMID:23508352

Intensive rice agriculture deteriorates the quality of shallow groundwater in a typical agricultural catchment in subtropical central China.

PubMed

Wang, Yi; Li, Yuyuan; Li, Yong; Liu, Feng; Liu, Xinliang; Gong, Dianlin; Ma, Qiumei; Li, Wei; Wu, Jinshui

2015-09-01

High nitrogen (N) concentrations in rural domestic water supplies have been attributed to excessive agricultural N leaching into shallow groundwater systems; therefore, it is important to determine the impact of agriculture (e.g., rice production) on groundwater quality. To understand the impact of agricultural land use on the N concentrations in the shallow groundwater in subtropical central China, a large observation program was established to observe ammonium-N (NH4-N), nitrate-N (NO3-N), and total N (TN) concentrations in 161 groundwater observation wells from April 2010 to November 2012. The results indicated that the median values of NH4-N, NO3-N, and TN concentrations in the groundwater were 0.15, 0.39, and 1.38 mg N L(-1), respectively. A total of 36.3 % of the water samples were categorized as NH4-N pollution, and only a small portion of the samples were categorized as NO3-N pollution, based on the Chinese Environmental Quality Standards for Groundwater of GB/T 14848-93 (General Administration of Quality Supervision of China, 1993). These results indicated of moderate groundwater NH4-N pollution, which was mainly attributed to intensive rice agriculture with great N fertilizer application rates in the catchment. In addition, tea and vegetable fields showed higher groundwater NO3-N and TN concentrations than other agricultural land use types. The factorial correspondence analysis (FCA) suggested that the flooded agricultural land use types (e.g., single-rice and double-rice) had potential to impose NH4-N pollution, particularly in the soil exhausting season during from July to October. And, the great N fertilizer application rates could lead to a worse NO3-N and TN pollution in shallow groundwater. Hence, to protect groundwater quality and minimize NH4-N pollution, managing optimal fertilizer application and applying appropriate agricultural land use types should be implemented in the region.

Root microbiota shift in rice correlates with resident time in the field and developmental stage.

PubMed

Zhang, Jingying; Zhang, Na; Liu, Yong-Xin; Zhang, Xiaoning; Hu, Bin; Qin, Yuan; Xu, Haoran; Wang, Hui; Guo, Xiaoxuan; Qian, Jingmei; Wang, Wei; Zhang, Pengfan; Jin, Tao; Chu, Chengcai; Bai, Yang

2018-06-01

Land plants in natural soil form intimate relationships with the diverse root bacterial microbiota. A growing body of evidence shows that these microbes are important for plant growth and health. Root microbiota composition has been widely studied in several model plants and crops; however, little is known about how root microbiota vary throughout the plant's life cycle under field conditions. We performed longitudinal dense sampling in field trials to track the time-series shift of the root microbiota from two representative rice cultivars in two separate locations in China. We found that the rice root microbiota varied dramatically during the vegetative stages and stabilized from the beginning of the reproductive stage, after which the root microbiota underwent relatively minor changes until rice ripening. Notably, both rice genotype and geographical location influenced the patterns of root microbiota shift that occurred during plant growth. The relative abundance of Deltaproteobacteria in roots significantly increased overtime throughout the entire life cycle of rice, while that of Betaproteobacteria, Firmicutes, and Gammaproteobacteria decreased. By a machine learning approach, we identified biomarker taxa and established a model to correlate root microbiota with rice resident time in the field (e.g., Nitrospira accumulated from 5 weeks/tillering in field-grown rice). Our work provides insights into the process of rice root microbiota establishment.

Observations on the fulvous tree duck in Louisiana

USGS Publications Warehouse

Meanley, B.; Meanley, A.G.

1959-01-01

The Fulvous Tree Duck is a locally common breeding bird of the rice fields of southwestern Louisiana. Observations made in 1955, 1956 and 1957, showed that this species was probably most abundant in the vicinity of Mamou, Evangeline Parish, and Roanoke, Jefferson Davis Parish. Tree ducks arrive in the rice country as the rice is planted in the spring and usually depart following fall harvest. A few winter in the coastal marshes. The nesting period extends from late May well into August. Thirteen and 20 pairs were found nesting in two separate five-square-mile areas. All nests observed were in rice fields. Clutch size in several nests found by John J. Lynch averaged about 13 eggs. A clutch of 23 eggs was probably a dump nest. Several investigators have reported incubation periods varying from 24 to 26 days. Nests were constructed of rice or other plants that occurred in the rice fields; they usually had a canopy and ramp; none was lined with down. Renesting compensated for some first attempt losses. Depredations on rice plantings sometimes occurred in spring in water-planted rice fields. Favorite foods were seeds of grasses and sedges found in rice fields. Flocks totalling 3000 were occasionally seen in the fall on the Lacassine Wildlife Refuge.

Mosquitoes and other aquatic insects in fallow field biotopes and rice paddy fields.

PubMed

Ohba, S Y; Matsuo, T; Takagi, M

2013-03-01

Fallow field biotopes that develop from abandoned rice fields are man-made wetlands that provide new habitats for various aquatic animals. Although consideration of such biotopes generally focuses on their positive aspects, this study evaluated the negative aspects of establishing fallow field biotopes with regard to mosquito breeding sites. To determine whether fallow field biotopes become breeding habitats for vector mosquitoes, we evaluated mosquito fauna in fallow field biotopes and adjacent rice fields. We found larvae of Anopheles lesteri, Anopheles sinensis and Culex tritaeniorhynchus (all: Diptera: Culicidae) in the biotopes. Although abundances of mosquito larvae in the biotopes and rice fields were statistically similar, mosquito abundances in rice fields increased dramatically in August when the water level reduced after the rainy season. The abundance and variety of the mosquitoes' natural predators were greater in biotopes than in rice fields because the former are a permanent and stable aquatic environment. A generalized linear mixed model showed a negative effect of predator diversity on mosquito larvae abundance in both habitats. Although fallow field biotopes become breeding habitats for vector mosquitoes, establishing biotopes from fallow fields in order to protect various aquatic animals, including mosquito insect predators, may help to control mosquito breeding. © 2012 The Royal Entomological Society.

Carbon and water cycling in flooded and rainfed rice (Oryza Sativa) ecosystem: Disentangling agronomical and ecological aspects of water use efficiency

NASA Astrophysics Data System (ADS)

Nay-Htoon, Bhone; Xue, Wei; Dubbert, Maren; Lindner, Steve; Cuntz, Matthias; Ko, Jonghan; Tenhunen, John; Werner, Christiane

2015-04-01

Agricultural crops play an important role in the global carbon and water cycling process and there is intense research to understand and predict carbon and water fluxes, productivity and water use of cultivated crops under climate change. Mechanistic understanding of the trade of between ecosystem water use efficiency and agronomic water use efficiency to maintain higher crop yield and productive water loss is necessary for the ecosystem sustainability. . We compared water and carbon fluxes of paddy and rainfed rice by canopy scale gas exchange measurements, crop growth, and daily evapotranspiration, transpiration and carbon flux modeling. According to our findings, evaporation contributed strongly (maximum 100% to minimum 45%) to paddy rice evapotranspiration while transpiration of rainfed is almost 50 % of daily evapotranspiration. Water use efficiency (WUE) was higher in rainfed rice both from an agronomic (WUEagro, i.e. grain yield per evapotranspiration) and ecosystem (WUEeco, i.e. gross primary production per evapotranspiration) perspective. However, rainfed rice showed also high ecosystem respiration losses and a slightly lower crop yield, demonstrating that higher WUE in rainfed rice comes at the expense of higher respiration losses of assimilated carbon and lower plant production, compared to paddy rice. Our results highlighted the need to partition water and carbon fluxes to improve our mechanistic understanding of water use efficiency and environmental impact of different agricultural practices. Keywords: Rainfed rice, Paddy rice, water use efficiency, Transpiration/Evapotranspiration, ecosystem WUE, agronomic WUE, Evapotranspiration

A comparison of weed communities of coastal rice fields in Peninsular Malaysia.

PubMed

Hakim, M A; Juraimi, Abdul Shukor; Hanafi, M M; Selamat, A

2013-09-01

A survey was conducted at 100 different rice fields in coastal areas of West Malaysia to identify most common and prevalent weeds associated with rice. Fields surveyed were done according to the quantitative survey method by using 0.5m x 0.5m size quadrate with 20 samples from each field. A total of 53 different weed species belong to 18 families were identified of which 32 annual and 21 perennial; 12 grassy, 13 sedges and 28 broadleaved weeds. Based on relative abundance the most prevalent and abundant weed species were selected in the coastal rice field. Among the 10 most abundant weed species, there were four grasses viz. Echinochloa crusgalli, Leptochloo chinensis, Echinochloo colona, Oryza sotivo L. (weedy rice).; four sedges viz. Fimbristylis miliacea, Cyperus iria, Cyperus difformis, Scirpus grossus and two broadleaved weeds viz. Sphenocleo zeylonica, Jussiaea linifolio. Leptochloa chinensis, E. crusgalli, F. miliocea, E. colona were more prevalent and abundant species out of the 10 most dominant weed species in the coastal rice field of Peninsular Malaysia.

Characterization of field isolates of Magnaporthe oryzae with mating type, DNA fingerprinting, and pathogenicity assays

USDA-ARS?s Scientific Manuscript database

Due to the harmful nature of the rice blast fungus, Magnaporthe oryzae, it is beneficial to characterize field isolates to help aid in the deployment of resistance (R) genes in rice. In the present study, 190 field isolates of M. oryzae, collected from rice fields of Yunnan province in China, were a...

Changing cultural landscape in post-productivism of rice field in Nyuh Kuning Village Bali

NASA Astrophysics Data System (ADS)

Maulidi, C.; Wulandari, L. D.

2017-06-01

Natural landscape in developing countries is facing a challenge due to economic growth, a cultural shift, and population dynamics. Farm land where is close to urban areas tending to be converted into more economically valuable spaces. Watershed Pakerisan listed as World Heritage of UNESCO, rich of cultural value on its landscape, especially the Subak, a traditional irrigation system, has a close relationship to the philosophy of Hindu-Bali culture. Nyuh Kuning, a village (local terms is Banjar) located adjacent to the Pakerisan Watershed, and has a spatial pattern in synergic ally connected with tradition, culture, and their religion. Rice field not only for economical but also its place to worship the Goddess (Dewi Sri). Rice Field in Nyuh Kuning declined significantly along past 10 years. The changing landscape of Nyuh Kuning traced through serial of aerial photographs from 2005 until 2015. Along with the broad decline of rice field, villager’s attachment on their cultural space is also changing. An economic motive pronounces a winner in the bargaining between the motives of economic value and cultural value in the Nyuh Kuning. Villagers revealed arguments that necessities nowadays prosecute high consumption, both for household and for education. Therefore conversion of rice fields to become more economical is understandable among communities. Villagers rent the rice fields to foreigners (migrants), and then foreigners take rice-fields as personal assets, not for the villagers (ritual activities and the cultural traditions) any longer. In theoritical term, villager’s emotional bond to the cultural landscape in post—productivism of rice field, is weakened. Wawedangan Desa and its complex cultural values are not part of their identity anymore. However, place dependence become the reason why the shifting place attachment is happening. Functional economic bond is mentioned as place dependence dominats in villager’s attachment. Certainly it’s not a sustainable way in conserving cultural landscape. Learning from Nyuh Kuning case, new ideas need to conserve cultural landscape and at the same time increased the economic villagers. Through considering rice fields renters preferences and attachment land in Nyuh Kuning, rice field is an important element for their preferences to stay at Nyuh Kuning. Villas in Nyuh Kuning retaining rice field map as part of the villa’s character. Here we can see rice field not only culturally valuable but also as a tourist attraction, which can be sustained if the communities themselves manage it.

Acetylcholinesterase inhibition and gill lesions in Rasbora caverii, an indigenous fish inhabiting rice field associated waterbodies in Sri Lanka.

PubMed

Wijeyaratne, W M D N; Pathiratne, Asoka

2006-10-01

The present study was aimed at applying condition factor (CF), brain acetylcholinesterase (AChE) and gill histology as biomarkers for detecting possible exposure/effect induced by pesticides in fish residing rice field associated waterbodies in Sri Lanka. Biomarkers of an indigenous fish, Rasbora caverii collected from five sampling sites including canals near rice fields, a river and a reservoir (the reference site) were evaluated at four sampling stages covering pesticide application periods during rice cultivation season in 2004. Results indicated that CF of the fish did not show significant alterations regardless of the sampling sites or sampling stages. Site specific differences in AChE activities of the fish were not evident either prior to application of pesticides or at 7 days after Paraquat application to the rice fields. Two days after the application of a mixture of Fenthion and Phenthoate to the rice fields, AChE activity of the fish collected from canals near rice fields was significantly depressed (65-75%) compared to the fish in the reference site. The activities remain depressed to 50-56% even at 65 days after the insecticides application. Laboratory studies showed that prior exposure of R. caverii to Paraquat (2 microg l(-1), 7 days) enhanced the extent of inhibition of brain AChE activity induced by Fenthion (3 microg l(-1)) or a mixture of Fenthion (3 microg l(-1)) and Phenthoate (5 microg l(-1)). Gills of fish collected from canals near rice fields exhibited abnormal multiple divisions at the tips of some secondary lamellae in addition to hyperplasia, hypertrophy and club shaped deformities. Results indicate that application of pesticides in rice culture could manifest a threat to native fish populations residing rice field associated waterbodies. The response of brain AChE and histological changes in the gills of R. caverii allowed differentiating sampling sites after insecticide applications to the rice fields. Hence, R. caverii may be considered as a surrogate species in ecotoxicological risk evaluation of agrochemicals in the region.

Automatic rice crop height measurement using a field server and digital image processing.

PubMed

Sritarapipat, Tanakorn; Rakwatin, Preesan; Kasetkasem, Teerasit

2014-01-07

Rice crop height is an important agronomic trait linked to plant type and yield potential. This research developed an automatic image processing technique to detect rice crop height based on images taken by a digital camera attached to a field server. The camera acquires rice paddy images daily at a consistent time of day. The images include the rice plants and a marker bar used to provide a height reference. The rice crop height can be indirectly measured from the images by measuring the height of the marker bar compared to the height of the initial marker bar. Four digital image processing steps are employed to automatically measure the rice crop height: band selection, filtering, thresholding, and height measurement. Band selection is used to remove redundant features. Filtering extracts significant features of the marker bar. The thresholding method is applied to separate objects and boundaries of the marker bar versus other areas. The marker bar is detected and compared with the initial marker bar to measure the rice crop height. Our experiment used a field server with a digital camera to continuously monitor a rice field located in Suphanburi Province, Thailand. The experimental results show that the proposed method measures rice crop height effectively, with no human intervention required.

Air pollutant emissions from rice straw open field burning in India, Thailand and the Philippines.

PubMed

Gadde, Butchaiah; Bonnet, Sébastien; Menke, Christoph; Garivait, Savitri

2009-05-01

Rice is a widely grown crop in Asia. China (30%) and India (21%) contribute to about half of the world's total rice production. In this study, three major rice-producing countries in Asia are considered, India, Thailand and the Philippines (the later two contributing 4% and 2% of the world's rice production). Rice straw is one of the main field based residues produced along with this commodity and its applications vary widely in the region. Although rice production practises vary from one country to another, open burning of straw is a common practice in these countries. In this study, an approach was followed aiming at (a) determining the quantity of rice straw being subject to open field burning in those countries, (b) congregating pollutant specific emissions factors for rice straw burning, and (c) quantifying the resulting air pollutant emissions. Uncertainties in the results obtained as compared to a global approach are also discussed.

Role of Remote Sensing and Geographyc Information System Mapping for Protected Areas Land Rice Field Subak, Buffer Zones, and Area Conversion (Case Studies In Gianyar Regency, Bali Province)

NASA Astrophysics Data System (ADS)

Lanya, Indayati; Netera Subadiyasa, N.

2016-11-01

Conversion of rice fields in Bali 2579 ha/year, Law Number 41 of 2009 [1] and five of Government Regulation (GR), mandates the Local Government (LG) has a Regional Regulation (RR) or Rule Regent/Mayor, on the protection of agricultural land sustainable food (PALSF). Yet none provincial government of Bali has PALSF; although Subak as world cultural heritage. Similarly, Gianyar regency development strategy directed to integrate agriculture with tourism. Landsat 8 images, Word View Coverage 2015 Gianyar district and ArcGIS 10.3 software used for of rice field mapping and zoning of land protection Subak. Ten thematic maps (watersheds, land use, irrigation, relief/slope, rainfall, spatial planning, land suitability, productivity, the distance from downtown) as a variable parameter, weighted and balanced numerically. Numerical classification agricultura land using for the overlay menu and reselek. The total value of >125 as rice need to be protected, 100-125 value for buffer zone, and the value of <100 rice fields can be converted to 40 next year. For the 20 next year, the total value of> 100, 50-100 and <50 respectively to rice fields that need to be protected, wetland buffer, and rice fields can be converted. Region Subak sustainable of rice field protection, buffer and can be converted in a row for the next 20 years is 10973 ha, 3855 ha and 311 ha. For the next 40 years Subak conserved of rice field (8019 ha), buffer (5855 ha), and can be converted (3124 ha). Subak land pattern of spread can be converted to an supply of land for non-agricultural development of the region downstream to the access road Ida Bagus Matera (Jln. Province / national) in the coastal areas of Gianyar.

Spectral and spatial characterization of rice field mosquito habitat

NASA Technical Reports Server (NTRS)

Wood, Byron L.; Beck, Louisa R.; Washino, Robert K.; Palchick, Susan M.; Sebesta, Paul D.

1991-01-01

Irrigated rice provides an ideal breeding habitat for Anopheles free-borni, the western malaria mosquito, throughout California. In a 1985 study, it was determined that early-season rice canopy development, as monitored using remotely sensed data, could be used to distinguish between high and low mosquito producing rice fields. This distinction could be made over two months prior to peak mosquito production. It was found that high-producing fields were located in an area characterized by a diversity of land use, including livestock pastures, whereas the low-producing fields were in an area devoted almost exclusively to the cultivation of rice. The ability to distinguish between high and low mosquito producing fields prior to peak mosquito production is important in terms of mosquito habitat surveillance and control.

Rapid assessment of rice seed availability for wildlife in harvested fields

USGS Publications Warehouse

Halstead, B.J.; Miller, M.R.; Casazza, Michael L.; Coates, P.S.; Farinha, M.A.; Benjamin, Gustafson K.; Yee, J.L.; Fleskes, J.P.

2011-01-01

Rice seed remaining in commercial fields after harvest (waste rice) is a critical food resource for wintering waterfowl in rice-growing regions of North America. Accurate and precise estimates of the seed mass density of waste rice are essential for planning waterfowl wintering habitat extents and management. In the Sacramento Valley of California, USA, the existing method for obtaining estimates of availability of waste rice in harvested fields produces relatively precise estimates, but the labor-, time-, and machineryintensive process is not practical for routine assessments needed to examine long-term trends in waste rice availability. We tested several experimental methods designed to rapidly derive estimates that would not be burdened with disadvantages of the existing method. We first conducted a simulation study of the efficiency of each method and then conducted field tests. For each approach, methods did not vary in root mean squared error, although some methods did exhibit bias for both simulations and field tests. Methods also varied substantially in the time to conduct each sample and in the number of samples required to detect a standard trend. Overall, modified line-intercept methods performed well for estimating the density of rice seeds. Waste rice in the straw, although not measured directly, can be accounted for by a positive relationship with density of rice on the ground. Rapid assessment of food availability is a useful tool to help waterfowl managers establish and implement wetland restoration and agricultural habitat-enhancement goals for wintering waterfowl. ?? 2011 The Wildlife Society.

Evaluating sustainable adaptation strategies for vulnerable mega-deltas using system dynamics modelling: Rice agriculture in the Mekong Delta's An Giang Province, Vietnam.

PubMed

Chapman, Alexander; Darby, Stephen

2016-07-15

Challenging dynamics are unfolding in social-ecological systems around the globe as society attempts to mitigate and adapt to climate change while sustaining rapid local development. The IPCC's 5th assessment suggests these changing systems are susceptible to unforeseen and dangerous 'emergent risks'. An archetypal example is the Vietnamese Mekong Delta (VMD) where the river dyke network has been heightened and extended over the last decade with the dual objectives of (1) adapting the delta's 18 million inhabitants and their livelihoods to increasingly intense river-flooding, and (2) developing rice production through a shift from double to triple-cropping. Negative impacts have been associated with this shift, particularly in relation to its exclusion of fluvial sediment deposition from the floodplain. A deficit in our understanding of the dynamics of the rice-sediment system, which involve unintuitive delays, feedbacks, and tipping points, is addressed here, using a system dynamics (SD) approach to inform sustainable adaptation strategies. Specifically, we develop and test a new SD model which simulates the dynamics between the farmers' economic system and their rice agriculture operations, and uniquely, integrates the role of fluvial sediment deposition within their dyke compartment. We use the model to explore a range of alternative rice cultivation strategies. Our results suggest that the current dominant strategy (triple-cropping) is only optimal for wealthier groups within society and over the short-term (ca. 10years post-implementation). The model suggests that the policy of opening sluice gates and leaving paddies fallow during high-flood years, in order to encourage natural sediment deposition and the nutrient replenishment it supplies, is both a more equitable and a more sustainable policy. But, even with this approach, diminished supplies of sediment-bound nutrients and the consequent need to compensate with artificial fertilisers will mean that smaller-scale farmers in the VMD are more vulnerable to accruing debt. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

Effect of organic matter amendment, arsenic amendment and water management regime on rice grain arsenic species.

PubMed

Norton, Gareth J; Adomako, Eureka E; Deacon, Claire M; Carey, Anne-Marie; Price, Adam H; Meharg, Andrew A

2013-06-01

Arsenic accumulation in rice grain has been identified as a major problem in some regions of Asia. A study was conducted to investigate the effect of increased organic matter in the soil on the release of arsenic into soil pore water and accumulation of arsenic species within rice grain. It was observed that high concentrations of soil arsenic and organic matter caused a reduction in plant growth and delayed flowering time. Total grain arsenic accumulation was higher in the plants grown in high soil arsenic in combination with high organic matter, with an increase in the percentage of organic arsenic species observed. The results indicate that the application of organic matter should be done with caution in paddy soils which have high soil arsenic, as this may lead to an increase in accumulation of arsenic within rice grains. Results also confirm that flooding conditions substantially increase grain arsenic. Copyright © 2013 Elsevier Ltd. All rights reserved.

Gene flow from transgenic rice to red rice (Oryza sativa L.) in the field.

PubMed

Busconi, M; Baldi, G; Lorenzoni, C; Fogher, C

2014-01-01

In this study, we simulate a transgenic rice crop highly infested with red rice to examine transgene transfer from a transgenic line (A2504) resistant to glufosinate ammonium to cohabitant red rice. The red rice was sown along with the transgenic line at the highest density found in naturally infested crops in the region. Agricultural practices similar to those used to control red rice infestation in northern Italy rice fields were used to reproduce the local rice production system. During the first 2 years, the field was treated with herbicide at the appropriate time; in the first year the dosage of herbicide was three times the recommended amount. In this first year, detectable red rice plants that escaped herbicide treatment were manually removed. Nevertheless, two herbicide-resistant hybrid plants (named 101 and 104) were identified in the experimental field during the second year of cultivation. Phenotypic and molecular characterisation suggests the hybrid nature of these two plants, deriving from crossing events involving A2504, respectively, with red rice (plant 101) and the buffer cultivar Gladio (plant 104). The progeny of two subsequent generations of the two plants were examined and the presence of the transgene detected, indicating stable transfer of the transgene across generations. In conclusion, despite control methods, red rice progeny tolerant to the herbicide can be expected following use of transgenic rice and, consequently, difficulties in controlling this weed with chemicals will emerge in a relatively short time. © 2013 German Botanical Society and The Royal Botanical Society of the Netherlands.

Agricultural use of wetlands: opportunities and limitations

PubMed Central

Verhoeven, Jos T. A.; Setter, Tim L.

2010-01-01

Background Wetlands are species-rich habitats performing valuable ecosystem services such as flood protection, water quality enhancement, food chain support and carbon sequestration. Worldwide, wetlands have been drained to convert them into agricultural land or industrial and urban areas. A realistic estimate is that 50 % of the world's wetlands have been lost. Scope This paper reviews the relationship between wetlands and agriculture with the aim to identify the successes and failures of agricultural use in different types of wetlands, with reference to short-term and long-term benefits and issues of sustainability. It also addresses a number of recent developments which will lead to pressure to reclaim and destroy natural wetlands, i.e. the continuous need for higher production to feed an increasing world population and the increasing cultivation of energy crops. Finally, attention is paid to the development of more flood-tolerant crop cultivars. Conclusions Agriculture has been carried out in several types of (former) wetlands for millennia, with crop fields on river floodplain soils and rice fields as major examples. However, intensive agricultural use of drained/reclaimed peatlands has been shown to lead to major problems because of the oxidation and subsidence of the peat soil. This does not only lead to severe carbon dioxide emissions, but also results in low-lying land which needs to be protected against flooding. Developments in South-East Asia, where vast areas of tropical peatlands are being converted into oil palm plantations, are of great concern in this respect. Although more flood-tolerant cultivars of commercial crop species are being developed, these are certainly not suitable for cultivation in wetlands with prolonged flooding periods, but rather will survive relatively short periods of waterlogging in normally improved agricultural soils. From a sustainability perspective, reclamation of peatlands for agriculture should be strongly discouraged. The opportunities for agriculture in naturally functioning floodplains should be further investigated. The development and use of crop cultivars with an even stronger flood tolerance could form part of the sustainable use of such floodplain systems. Extensive use of wetlands without drastic reclamation measures and without fertilizer and pesticides might result in combinations of food production with other wetland services, with biodiversity remaining more or less intact. There is a need for research by agronomists and environmental scientists to optimize such solutions. PMID:19700447

75 FR 62061 - Proposed Flood Elevation Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2010-10-07

... railroad bridge. Mahanoy Creek Approximately 0.71 mile None +781 Township of Butler. upstream of Rice Road... Unincorporated Areas of Black Creek. Darlington County. Approximately 0.7 mile None +189 upstream of Bobo Newsom Highway. Black Creek (DS) Approximately 0.5 mile None +77 City of Darlington, downstream of Muses...

Leaf gas films contribute to rice (Oryza sativa) submergence tolerance during saline floods.

PubMed

Herzog, Max; Konnerup, Dennis; Pedersen, Ole; Winkel, Anders; Colmer, Timothy David

2018-05-01

Floods and salinization of agricultural land adversely impact global rice production. We investigated whether gas films on leaves of submerged rice delay salt entry during saline submergence. Two-week-old plants with leaf gas films (+GF) or with gas films experimentally removed (-GF) were submerged in artificial floodwater with 0 or 50 mm NaCl for up to 16 d. Gas films were present >9 d on GF plants after which gas films were diminished. Tissue ion analysis (Na + , Cl - and K + ) showed that gas films caused some delay of Na + entry, as leaf Na + concentration was 36-42% higher in -GF leaves than +GF leaves on days 1-5. However, significant net uptakes of Na + and Cl - , and K + net loss, occurred despite the presence of gas films, indicating the likely presence of some leaf-to-floodwater contact, so that the gas layer must not have completely separated the leaf surfaces from the water. Natural loss and removal of gas films resulted in severe declines in growth, underwater photosynthesis, chlorophyll a and tissue porosity. Submergence was more detrimental to leaf P N and growth than the additional effect of 50 mm NaCl, as salt did not significantly affect underwater P N at 200 μm CO 2 nor growth. © 2016 John Wiley & Sons Ltd.

Riceland mosquito management practices for Anopheles quadrimaculatus larvae.

PubMed

Allen, R A; Wilkes, W W; Lewis, C N; Meisch, M V

2008-12-01

Two separate but related studies were conducted regarding management of Anopheles quadrimaculatus larval populations in commercial rice fields near Cleveland, MS, in 2004. Study 1 was to evaluate the effectiveness of 2 treatments of aerially applied ultra-low volume applications of Bacillus thuringiensis var. israelensis (Bti) against An. quadrimaculatus larvae in dense, high-canopy mid- to late-season rice crop. Study 2 was to investigate the effect of preflood treatments of lambda-cyhalothrin (Karate), which is commonly used against rice water weevil (Lissorhoptrus oryzophilus), on An. quadrimaculatus larvae. Excellent initial, but short residual control (>99% control 1 day after treatment) was observed in the Bti-treated fields in both mid- and late-season rice. Little or no effect on mosquito larvae was observed in the lambda-cyhalothrin-treated fields. Results indicate that Bti can be effectively used by mosquito management personnel to control larval populations of An. quadrimaculatus in late-season rice fields; however, lambda-cyhalothrin did not effectively control larval An. quadrimaculatus when applied preflood to rice fields.

A digital photography and analysis system for estimation of root and shoot development in rice weed suppression studies in the field

USDA-ARS?s Scientific Manuscript database

Rice germplasm with an inherent ability to suppress weeds can potentially improve the economics and sustainability of weed control in rice. We devised a simple, rapid, and inexpensive digital imaging system to quantify several shoot and root growth characteristics in field-grown rice plants that ha...

An automatic approach for rice mapping in temperate region using time series of MODIS imagery: first results for Mediterranean environment

NASA Astrophysics Data System (ADS)

Boschetti, M.; Nelson, A.; Manfrom, G.; Brivio, P. A.

2012-04-01

Timely and accurate information on crop typology and status are required to support suitable action to better manage agriculture production and reduce food insecurity. More specifically, regional crop masking and phenological information are important inputs for spatialized crop growth models for yield forecasting systems. Digital cartographic data available at global/regional scale, such as GLC2000, GLOBCOVER or MODIS land cover products (MOD12), are often not adequate for this crop modeling application. For this reason, there is a need to develop and test methods that can provide such information for specific cropsusing automated classification techniques.. In this framework we focused our analysis on the rice cultivation area detection due to the importance of this crop. Rice is a staple food for half of the world's population (FAO 2004). Over 90% of the world's rice is produced and consumed in Asia and the region is home to 70% of the world's poor, most of whom depend on rice for their livelihoods andor food security. Several initiatives are being promoted at the international level to provide maps of rice cultivated areas in South and South East Asia using different approaches available in literature for rice mapping in tropical regions. We contribute to these efforts by proposing an automatic method to detect rice cultivated areas in temperate regions exploiting MODIS 8-Day composite of Surface Reflectance at 500m spatial resolution (MOD09A1product). Temperate rice is cultivated worldwide in more than 20 countries covering around 16M ha for a total production of about 65M tons of paddy per year. The proposed method is based on a common approach available in literature that first identifies flood condition that can be related to rice agronomic practice and then checks for vegetation growth. The method presents innovative aspects related both to the flood detection, exploiting Short Wave Infrared spectral information, and to the crop grow monitoring analyzing vegetation index seasonal trend. Tests conducted in European Mediterranean environment demonstrated that our approach is able to provide accurate rice map (User Accuracy > 80%) when compared to available Corine Land Cover land use map (1:100.000 scale, MMU 25 ha). Map accuracy in term of omission and commission error has been analyzed in north of Italy where about 60 % of total European riceis produced. For this study area thematic cartography at 1:10.000scale allowed to analyze the type of commission errors and evaluate the entity of omission errors in relation to low resolution bias and/or algorithm performance. Pareto boundary method has been used to assess the level of accuracy of the method respect a maximum achievable accuracy with medium resolution MODIS data. Results demonstrate that the proposed approach outperform the method developed for tropical and sub-tropical environment.

Direct and reverse pollen-mediated gene flow between GM rice and red rice weed

PubMed Central

Serrat, X.; Esteban, R.; Peñas, G.; Català, M. M.; Melé, E.; Messeguer, J.

2013-01-01

Potential risks of genetically modified (GM) crops must be identified before their commercialization, as happens with all new technologies. One of the major concerns is the proper risk assessment of adventitious presence of transgenic material in rice fields due to cross-pollination. Several studies have been conducted in order to quantify pollen-mediated gene flow from transgenic rice (Oryza sativa) to both conventional rice and red rice weed (O. sativa f. spontanea) under field conditions. Some of these studies reported GM pollen-donor rice transferring GM traits to red rice. However, gene flow also occurs in the opposite direction, in a phenomenon that we have called reverse gene flow, resulting in transgenic seeds that have incorporated the traits of wild red rice. We quantified reverse gene flow using material from two field trials. A molecular analysis based on amplified fragment length polymorphisms was carried out, being complemented with a phenotypic identification of red rice traits. In both field trials, the reverse gene flow detected was greater than the direct gene flow. The rate of direct gene flow varied according to the relative proportions of the donor (GM rice) and receptor (red rice) plants and was influenced by wind direction. The ecological impact of reverse gene flow is limited in comparison with that of direct gene flow because non-shattered and non-dormant seeds would be obtained in the first generation. Hybrid seed would remain in the spike and therefore most of it would be removed during harvesting. Nevertheless, this phenomenon must be considered in fields used for elite seed production and in developing countries where farmers often keep some seed for planting the following year. In these cases, there is a higher risk of GM red rice weed infestation increasing from year to year and therefore a proper monitoring plan needs to be established.

The relationship between mosquito abundance and rice field density in the Republic of Korea

PubMed Central

2010-01-01

Background Japanese encephalitis virus (JEV), the causative agent of Japanese encephalitis (JE), is endemic to the Republic of Korea (ROK) where unvaccinated United States (U.S.) military Service members, civilians and family members are stationed. The primary vector of the JEV in the ROK is Culex tritaeniorhynchus. The ecological relationship between Culex spp. and rice fields has been studied extensively; rice fields have been shown to increase the prevalence of Cx. tritaeniorhynchus. This research was conducted to determine if the quantification of rice field land cover surrounding U.S. military installations in the ROK should be used as a parameter in a larger risk model that predicts the abundance of Cx. tritaeniorhynchus populations. Mosquito data from the U.S. Forces Korea (USFK) mosquito surveillance program were used in this project. The average number of female Cx. tritaeniorhynchus collected per trap night for the months of August and September, 2002-2008, was calculated. Rice fields were manually digitized inside 1.5 km buffer zones surrounding U.S. military installations on high-resolution satellite images, and the proportion of rice fields was calculated for each buffer zone. Results Mosquito data collected from seventeen sample sites were analyzed for an association with the proportion of rice field land cover. Results demonstrated that the linear relationship between the proportion of rice fields and mosquito abundance was statistically significant (R2 = 0.62, r = .79, F = 22.72, p < 0.001). Conclusions The analysis presented shows a statistically significant linear relationship between the two parameters, proportion of rice field land cover and log10 of the average number of Cx. tritaeniorhynchus collected per trap night. The findings confirm that agricultural land cover should be included in future studies to develop JE risk prediction models for non-indigenous personnel living at military installations in the ROK. PMID:20573242

Coupling AVHRR imagery with biogeochemical models of methane emission from rice crops

NASA Astrophysics Data System (ADS)

Paliouras, Eleni Joyce

2000-10-01

Rice is a staple food source for much of the world and most of it is grown in paddies which remain flooded for a large part of the growing season. This anaerobic environment is ideal for the activities of methanogenic bacteria, that are responsible for the production of methane gas, some of which is released into the atmosphere. In order to better understand the role that rice cropping plays in the levels of atmospheric methane, several models have been developed to predict the methane flux from the paddies. These models generally utilize some type of nominal plant growth curve based on one or two pieces of ground truth data. Ideally, satellite data could be used instead to provide these models with an estimate of biomass change over the growing season, eliminating the need for related ground truth. A technique proposed to accomplish this is presented here, and results that demonstrate its success when applied to rice cropping areas of Texas are discussed. Also presented is a method for utilizing satellite data to map rice cropping areas that could eventually aid in a scheme for populating a GIS-type database with information on exact rice cropping areas. Such a database could then be directly tied to the methane emission models to obtain flux estimates for extensive regional areas.

Soil water availability and capacity of nitrogen accumulation influence variations of intrinsic water use efficiency in rice.

PubMed

Xue, Wei; Nay-Htoon, Bhone; Lindner, Steve; Dubbert, Maren; Otieno, Dennis; Ko, Jonghan; Werner, Christiane; Tenhunen, John

2016-04-01

Leaf intrinsic water use efficiency (WUEi) coupling maximum assimilation rate (Amax) and transpirable water lost via stomatal conductance (gsc) has been gaining increasing concern in sustainable crop production. Factors that influence leaf Amax and WUEi in rice (Oryza sativa L. cv Unkang) at flooding and rainfed conditions were evaluated. Positive correlations for leaf nitrogen content (Nm) and maximum carboxylation rate (Vcmax), for nitrogen allocation in Rubisco enzymes and mesophyll conductance (gm) were evident independent of cropping cultures. Rainfed rice exhibited enriched canopy leaf average Nm resulting in higher Amax, partially supporting improved leaf WUEi. Maximum WUEi (up to 0.14 μmol mmol(-1)) recorded in rainfed rice under drought conditions resulted from increasing gm/gsc ratio while at cost of significant decline in Amax due to hydraulically constrained gsc. Amax sensitivity related to gsc which was regulated by plant hydraulic conductance. WUEi was tightly correlated to Vcmax/gsc and gm/gsc ratios across the paddy and rainfed not to light environment, morphological and physiological traits, highlighting enhance capacity of Nm accumulation in rainfed rice with gsc at moderately high level similar to paddy rice facilitate optimization in Amax and WUEi while, is challenged by drought-vulnerable plant hydraulic conductance. Copyright © 2016 Elsevier GmbH. All rights reserved.

Enriching rice with Zn and Fe while minimizing Cd risk

PubMed Central

Slamet-Loedin, Inez H.; Johnson-Beebout, Sarah E.; Impa, Somayanda; Tsakirpaloglou, Nikolaos

2015-01-01

Enriching iron (Fe) and zinc (Zn) content in rice grains, while minimizing cadmium (Cd) levels, is important for human health and nutrition. Natural genetic variation in rice grain Zn enables Zn-biofortification through conventional breeding, but limited natural Fe variation has led to a need for genetic modification approaches, including over-expressing genes responsible for Fe storage, chelators, and transporters. Generally, Cd uptake and allocation is associated with divalent metal cations (including Fe and Zn) transporters, but the details of this process are still unknown in rice. In addition to genetic variation, metal uptake is sometimes limited by its bioavailability in the soil. The availability of Fe, Zn, and Cd for plant uptake varies widely depending on soil redox potential. The typical practice of flooding rice increases Fe while decreasing Zn and Cd availability. On the other hand, moderate soil drying improves Zn uptake but also increases Cd and decreases Fe uptake. Use of Zn- or Fe-containing fertilizers complements breeding efforts by providing sufficient metals for plant uptake. In addition, the timing of nitrogen fertilization has also been shown to affect metal accumulation in grains. The purpose of this mini-review is to identify knowledge gaps and prioritize strategies for improving the nutritional value and safety of rice. PMID:25814994

Multi-year monitoring of paddy rice planting area in Northeast China using MODIS time series data.

PubMed

Shi, Jing-jing; Huang, Jing-feng; Zhang, Feng

2013-10-01

The objective of this study was to investigate the tempo-spatial distribution of paddy rice in Northeast China using moderate resolution imaging spectroradiometer (MODIS) data. We developed an algorithm for detection and estimation of the transplanting and flooding periods of paddy rice with a combination of enhanced vegetation index (EVI) and land surface water index with a central wavelength at 2130 nm (LSWI2130). In two intensive sites in Northeast China, fine resolution satellite imagery was used to validate the performance of the algorithm at pixel and 3×3 pixel window levels, respectively. The commission and omission errors in both of the intensive sites were approximately less than 20%. Based on the algorithm, annual distribution of paddy rice in Northeast China from 2001 to 2009 was mapped and analyzed. The results demonstrated that the MODIS-derived area was highly correlated with published agricultural statistical data with a coefficient of determination (R(2)) value of 0.847. It also revealed a sharp decline in 2003, especially in the Sanjiang Plain located in the northeast of Heilongjiang Province, due to the oversupply and price decline of rice in 2002. These results suggest that the approaches are available for accurate and reliable monitoring of rice cultivated areas and variation on a large scale.

Multi-year monitoring of paddy rice planting area in Northeast China using MODIS time series data*

PubMed Central

Shi, Jing-jing; Huang, Jing-feng; Zhang, Feng

2013-01-01

The objective of this study was to investigate the tempo-spatial distribution of paddy rice in Northeast China using moderate resolution imaging spectroradiometer (MODIS) data. We developed an algorithm for detection and estimation of the transplanting and flooding periods of paddy rice with a combination of enhanced vegetation index (EVI) and land surface water index with a central wavelength at 2 130 nm (LSWI2130). In two intensive sites in Northeast China, fine resolution satellite imagery was used to validate the performance of the algorithm at pixel and 3×3 pixel window levels, respectively. The commission and omission errors in both of the intensive sites were approximately less than 20%. Based on the algorithm, annual distribution of paddy rice in Northeast China from 2001 to 2009 was mapped and analyzed. The results demonstrated that the MODIS-derived area was highly correlated with published agricultural statistical data with a coefficient of determination (R 2) value of 0.847. It also revealed a sharp decline in 2003, especially in the Sanjiang Plain located in the northeast of Heilongjiang Province, due to the oversupply and price decline of rice in 2002. These results suggest that the approaches are available for accurate and reliable monitoring of rice cultivated areas and variation on a large scale. PMID:24101210

Conditions Leading to High CO2 (>5 kPa) in Waterlogged–Flooded Soils and Possible Effects on Root Growth and Metabolism

PubMed Central

GREENWAY, HANK; ARMSTRONG, WILLIAM; COLMER, TIMOTHY D.

2006-01-01

• Aims Soil waterlogging impedes gas exchange with the atmosphere, resulting in low PO2 and often high PCO2. Conditions conducive to development of high PCO2 (5–70 kPa) during soil waterlogging and flooding are discussed. The scant information on responses of roots to high PCO2 in terms of growth and metabolism is reviewed. • Scope PCO2 at 15–70 kPa has been reported for flooded paddy-field soils; however, even 15 kPa PCO2 may not always be reached, e.g. when soil pH is above 7. Increases of PCO2 in soils following waterlogging will develop much more slowly than decreases in PO2; in soil from rice paddies in pots without plants, maxima in PCO2 were reached after 2–3 weeks. There are no reliable data on PCO2 in roots when in waterlogged or flooded soils. In rhizomes and internodes, PCO2 sometimes reached 10 kPa, inferring even higher partial pressures in the roots, as a CO2 diffusion gradient will exist from the roots to the rhizomes and shoots. Preliminary modelling predicts that when PCO2 is higher in a soil than in roots, PCO2 in the roots would remain well below the PCO2 in the soil, particularly when there is ventilation via a well-developed gas-space continuum from the roots to the atmosphere. The few available results on the effects of PCO2 at > 5 kPa on growth have nearly all involved sudden increases to 10–100 kPa PCO2; consequently, the results cannot be extrapolated with certainty to the much more gradual increases of PCO2 in waterlogged soils. Nevertheless, rice in an anaerobic nutrient solution was tolerant to 50 kPa CO2 being suddenly imposed. By contrast, PCO2 at 25 kPa retarded germination of some maize genotypes by 50 %. With regard to metabolism, assuming that the usual pH of the cytoplasm of 7·5 was maintained, every increase of 10 kPa CO2 would result in an increase of 75–90 mm HCO3− in the cytoplasm. pH maintenance would depend on the biochemical and biophysical pH stats (i.e. regulatory systems). Furthermore, there are indications that metabolism is adversely affected when HCO3− in the cytoplasm rises above 50 mm, or even lower; succinic dehydrogenase and cytochrome oxidase are inhibited by HCO3− as low as 10 mm. Such effects could be mitigated by a decrease in the set point for the pH of the cytoplasm, thus lowering levels of HCO3− at the prevailing PCO2 in the roots. • Conclusions Measurements are needed on PCO2 in a range of soil types and in roots of diverse species, during waterlogging and flooding. Species well adapted to high PCO2 in the root zone, such as rice and other wetland plants, thrive even when PCO2 is well over 10 kPa; mechanisms of adaptation, or acclimatization, by these species need exploration. PMID:16644893

Rice crop growth monitoring using ENVISAT-1/ASAR AP mode

NASA Astrophysics Data System (ADS)

Konishi, Tomohisa; Suga, Yuzo; Omatu, Shigeru; Takeuchi, Shoji; Asonuma, Kazuyoshi

2007-10-01

Hiroshima Institute of Technology (HIT) is operating the direct down-links of microwave and optical earth observation satellite data in Japan. This study focuses on the validation for rice crop monitoring using microwave remotely sensed image data acquired by ENIVISAT-1 referring to ground truth data such as height of rice crop, vegetation cover rate and leaf area index in the test sites of Hiroshima district, the western part of Japan. ENVISAT-1/ASAR data has the capabilities for the monitoring of the rice crop growing cycle by using alternating cross polarization mode images. However, ASAR data is influenced by several parameters such as land cover structure, direction and alignment of rice crop fields in the test sites. In this study, the validation was carried out to be combined with microwave image data and ground truth data regarding rice crop fields to investigate the above parameters. Multi-temporal, multi-direction (descending and ascending) and multi-angle ASAR alternating cross polarization mode images were used to investigate during the rice crop growing cycle. On the other hand, LANDSAT-7/ETM+ data were used to detect land cover structure, direction and alignment of rice crop fields corresponding to the backscatter of ASAR. Finally, the extraction of rice planted area was attempted by using multi-temporal ASAR AP mode data such as VV/VH and HH/HV. As the result of this study, it is clear that the estimated rice planted area coincides with the existing statistical data for area of the rice crop field. In addition, HH/HV is more effective than VV/VH in the rice planted area extraction.

Monoclonal antibody-based serological assays and immunocapture-RT-PCR for detecting Rice dwarf virus in field rice plants and leafhopper vectors.

PubMed

Wu, Jianxiang; Ni, Yuequn; Liu, Huan; Ding, Ming; Zhou, Xueping

2014-01-01

Rice dwarf virus (RDV) causes Rice dwarf disease, which leads to considerable losses in rice production in Asia. Purified RDV virions were used as the immunogen to prepare monoclonal antibodies (mAbs). Three murine mAbs against RDV were prepared. Plate-trapped antigen enzyme-linked immunosorbent assay (PTA-ELISA), dot enzyme-linked immunosorbent assay (dot-ELISA) and immunocapture-RT-PCR (IC-RT-PCR) were then developed for sensitive, specific, and rapid detection of RDV in rice and leafhopper samples obtained in the field using the mAbs. The PTA-ELISA, dot-ELISA and IC-RT-PCR detected the virus in infected tissue crude extracts diluted at 1:81,920, 1:10,240 and 1:655,360 (w/v, g mL(-1)), in individual viruliferous rice green leafhopper crude extracts diluted at 1:25,600, 1:6400 and 1:3,276,800 (individual leafhopper/μL), respectively. 878 rice field samples and 531 leafhopper field samples from ten provinces of China were screened for the presence of RDV using the two serological assays and the IC-RT-PCR and the results indicated that 37 of the 878 rice samples and 22 of the 531 leafhopper samples were infected by RDV. All positive samples were from Yunnan Province, indicating that RDV is prevalent in this province, but not in the other nine provinces. The dot-ELISA is suitable for routine detection of large-scale rice and leafhopper samples in field surveys. Copyright © 2013 Elsevier B.V. All rights reserved.

Assessing farmers' community readiness towards the enhancement of natural enemy population in rice fields in Malacca

NASA Astrophysics Data System (ADS)

Fairuz, K.; Idris, A. G.; Syahrizan, S.; Hatijah, K.

2018-04-01

Malacca has committed to be a green technology state by the year 2020. Agriculture is one of the main industries that have been highlighted to achieve this goal especially rice farming activities. Some limitations for this issue have restricted the accomplishment of the plan including pesticide usage among rice farmers. The use of chemicals in rice field need to be reduced significantly in order to support the goal. One of the indicators to the successfulness of pesticide reduction is the increasing numbers of natural enemies' species abundance and population in the rice field. Natural enemies were important to regulate pest populations in rice field naturally. Farmers' readiness to participate in this issue is very important to ensure the successfulness. The level of readiness of farmers' community will determine whether they are ready or not to execute the plan. Unfortunately, such information in rice farmers' community was not properly measured. Thus this study was aimed to assess the readiness level of rice farmers' community to change in order to enhance natural enemies in their rice field. This study was adapting the CR model as its theoretical framework. Three rice farming area in Malacca were involved in this study namely, Jasin, Melaka Tengah and Alor Gajah. Questionnaires were used as major instrument and were randomly distributed to 224 farmers. Data collected were tested for their reliability, significance and level of readiness. Knowledge of issue, knowledge of effort and resources dimensions were found influencing the readiness dimension significantly, whilst the attitude and leadership dimensions were not. Generally, the level of readiness for farmers' community in Malacca was found in the sixth or initial stage, where some of them initially have started to practice a few related activities to enhance the natural enemies' population in their rice field. Continuous support and assistant from the leaders and local authorities are crucially needed in order to sustain and improve the farmers' community level of readiness.

Reconciling the conservation of the purple swamphen (Porphyrio porphyrio) and its damage in Mediterranean rice fields through sustainable non-lethal techniques

PubMed Central

Piqué, Josep

2018-01-01

Resolving human–wildlife conflicts requires the assessment and implementation of appropriate technical measures that minimize negative impacts on socio-economic uses, including agriculture, and ensure the adequate protection of biological diversity. Rice paddies are widely distributed in the western Mediterranean region. Because of their high productivity, they can be a good habitat for waterbirds, including the purple swamphen Porphyrio porphyrio, particularly in areas where natural wetlands have been removed or reduced. As a result of its population growth, there have been increasing levels of damage caused by this species in rice fields due to stem-cutting and opening of bald patches in rice fields. With the aim of reducing damage, we evaluated the effectiveness of passive and active measures that would limit access to rice fields and deter/scare away purple swamphens in affected areas of the Ebro Delta (NE Spain). We selected the techniques according to the growth phase of rice and the activity of birds in the rice fields (perimeter fences and clearing vegetation around the rice plots during sprouting and growing phases, and falconry at maturation). There were positive results during the sprouting and growing phases thanks to fences and clearing vegetation, reducing the affected area by 37.8% between treatment and control plots. This would mean an economic savings of 18,550 €/year in compensation payments by regional administrations including the investment in implementing and maintaining passive protection measures. Active deterrence through falconry did not reduce the level of damage. The analysis of purple swamphen home range, activity centers (centroids), and the proportion of locations in and outside of rice fields showed no differences before and after dissuasive practices. These results were influenced by multiple concurrent factors including weather, the structural configuration of the rice plots and their location. In summary, we recommend the establishment of protection measures (perimeter fences + clearing vegetation around the rice plots) to reduce the level of damage. PMID:29707429

Preliminary results on yield and CO2 fluxes when using alternate wetting and drying on different varieties of European rice

NASA Astrophysics Data System (ADS)

Oliver, Viktoria; Monaco, Stefano; Volante, Andrea; Cochrane, Nicole; Gennaro, Massimo; Orasen, Gabriele; Valè, Giampiero; Price, Adam; Arn Teh, Yit

2016-04-01

In Europe, rice is grown (467 000 ha) under permanently flooded conditions (PF) using irrigation waters of major rivers. Climate change, which has led to a greater fluctuation in river flows, is a major challenge to rice production systems, which depend on large and consistent water supplies. This challenge will become more acute in the future, with more frequent extreme weather (e.g. drought) predicted under climate change and increased demands for rice. Alternate wetting and drying (AWD) is a system in where irrigation is applied to obtain 2-5 cm of field water depth, after which the soil is allowed to drain naturally to typically 15 cm below the surface before re-wetting once more. Preliminary studies suggest that AWD can reduce water use by up 30 %, with no net loss in yield but significantly reducing CH4 emissions. However, uncertainties still remain as to the impacts of AWD on CO2 exchange, N2O fluxes, and plant acclimation responses to a fluctuating water regime. For example, CO2 emissions could potentially increase in AWD due to higher rates of soil organic matter decomposition when the fields are drained. The work presented here evaluated the impacts of AWD on the productivity and yield of twelve varieties of European rice, whilst simultaneously measuring CO2 exchange, N2O fluxes, and plant biomass allocation patterns under different treatment regimes. Field experiments were conducted in the Piedmont region (northern Italy Po river plain) in a loamy soil during the growing season of 2015 in a 2-factor paired plot design, with water treatment (AWD, PF) and variety (12 European varieties) as factors (n=4 per variety per treatment). The varieties chosen were commercially important cultivars from across the rice growing regions of Europe (6 Italian, 3 French, 3 Spanish). Light and dark CO2 fluxes were measured six times over the growing season, using an infra-red gas analyzer. Environmental variables (soil moisture, temperature, water table depth, water potential, PAR) were collected concomitantly. Above and belowground biomass were determined by destructively harvesting at the end of the growing season. Belowground biomass was estimated by manually extracting roots from 30 cm deep soil cores and aboveground biomass estimated by collecting and weighing the rachis, grain and straw on a 1 metre linear section from every variety of rice. Overall, there was no significant effect between AWD and PF systems on rough grain production (863 and 822 g DM m-2) or straw yield (776 and 813 g DM m-2) for PF and AWD, respectively. There was also no significant difference for net ecosystem exchange (NEE) (-10.83 ± 1.10 and -9.71 ± 1.17 mg C m-2 s-1) or ecosystem respiration (Re) (6.86 ± 0.63 and 6.26 ± 0.61 mg C m-2 s-1), with the exception of one French variety (Gageron). This cultivar showed a significant increase in NEE under AWD (PF = -13.61 ± 2.89 and AWD = -17.63 ± 5.33 mg C m-2 s-1). The results from this study highlight that this novel water management strategy for European rice can have multiple environmental benefits without sacrificing yield.

Genetic diversity of weedy red rice (Oryza sativa) in Arkansas, USA

USDA-ARS?s Scientific Manuscript database

Weedy red rice (Oryza sativa L.) is a problematic weed in rice. About 50% of US rice is produced in Arkansas and 60% of these fields have some red rice infestation. Red rice populations are morphologically and phenologically diverse. We hypothesize that red rice in Arkansas has high genetic diversit...

Seasonal assessment of greenhouse gas emission from irrigated lowland rice field under infrared warming

USDA-ARS?s Scientific Manuscript database

Rice fields are considered as one of the major sources of methane (CH4), and they also emit nitrous oxide (N2O). A field experiment was conducted at the International Rice Research Institute, Philippines, in 2010 – 2011 using a temperature free-air controlled enhancement (T-FACE) system. Our object...

Performance of hybrids between weedy rice and insect-resistant transgenic rice under field experiments: implication for environmental biosafety assessment.

PubMed

Cao, Qian-Jin; Xia, Hui; Yang, Xiao; Lu, Bao-Rong

2009-12-01

Transgene escape from genetically modified (GM) rice into weedy rice via gene flow may cause undesired environmental consequences. Estimating the field performance of crop-weed hybrids will facilitate our understanding of potential introgression of crop genes (including transgenes) into weedy rice populations, allowing for effective biosafety assessment. Comparative studies of three weedy rice strains and their hybrids with two GM rice lines containing different insect-resistance transgenes (CpTI or Bt/CpTI) indicated an enhanced relative performance of the crop-weed hybrids, with taller plants, more tillers, panicles, and spikelets per plant, as well as higher 1 000-seed weight, compared with the weedy rice parents, although the hybrids produced less filled seeds per plant than their weedy parents. Seeds from the F(1) hybrids had higher germination rates and produced more seedlings than the weedy parents, which correlated positively with 1 000-seed weight. The crop-weed hybrids demonstrated a generally enhanced relative performance than their weedy rice parents in our field experiments. These findings indicate that transgenes from GM rice can persist to and introgress into weedy rice populations through recurrent crop-to-weed gene flow with the aid of slightly increased relative fitness in F(1) hybrids.

Arsenic speciation dynamics in paddy rice soil-water environment: sources, physico-chemical, and biological factors - A review.

PubMed

Kumarathilaka, Prasanna; Seneweera, Saman; Meharg, Andrew; Bundschuh, Jochen

2018-04-21

Rice is the main staple carbohydrate source for billions of people worldwide. Natural geogenic and anthropogenic sources has led to high arsenic (As) concentrations in rice grains. This is because As is highly bioavailable to rice roots under conditions in which rice is cultivated. A multifaceted and interdisciplinary understanding, both of short-term and long-term effects, are required to identify spatial and temporal changes in As contamination levels in paddy soil-water systems. During flooding, soil pore waters are elevated in inorganic As compared to dryland cultivation systems, as anaerobism results in poorly mobile As(V), being reduced to highly mobile As(III). The formation of iron (Fe) plaque on roots, availability of metal (hydro)oxides (Fe and Mn), organic matter, clay mineralogy and competing ions and compounds (PO 4 3- and Si(OH) 4 ) are all known to influence As(V) and As(III) mobility in paddy soil-water environments. Microorganisms play a key role in As transformation through oxidation/reduction, and methylation/volatilization reactions, but transformation kinetics are poorly understood. Scientific-based optimization of all biogeochemical parameters may help to significantly reduce the bioavailability of inorganic As. Copyright © 2018 Elsevier Ltd. All rights reserved.

Using alternate wetting & drying (AWD) rice flooding management

USDA-ARS?s Scientific Manuscript database

Research has shown that Mid-South producers can properly adapt and manage AWD, so as to reduce irrigation use while having no negative impact on grain yield. In addition to helping to reduce demand for groundwater, up to one gallon of diesel fuel may be saved for every acre-inch of groundwater that ...

Hydrology and Species-Specific Effects of Bacopa monnieri and Leersia oryzoides on Soil and Water Chemistry

USDA-ARS?s Scientific Manuscript database

In an eight week greenhouse experiment, Bacopa monnieri (Water Hyssop) and Leersia oryzoides (Rice Cutgrass) were compared for nutrient assimilation as well as soil and water chemistry under variable flooding regimes using a nutrient solution rich in nitrogen (N) and phosphorus (P). Soil redox poten...

Cadmium contamination of agricultural soils and crops resulting from sphalerite weathering.

PubMed

Robson, T C; Braungardt, C B; Rieuwerts, J; Worsfold, P

2014-01-01

The biogeochemistry and bioavailability of cadmium, released during sphalerite weathering in soils, were investigated under contrasting agricultural scenarios to assess health risks associated with sphalerite dust transport to productive soils from mining. Laboratory experiments (365 d) on temperate and sub-tropical soils amended with sphalerite (<63 μm, 0.92 wt.% Cd) showed continuous, slow dissolution (0.6-1.2% y(-1)). Wheat grown in spiked temperate soil accumulated ≈38% (29 μmol kg(-1)) of the liberated Cd, exceeding food safety limits. In contrast, rice grown in flooded sub-tropical soil accumulated far less Cd (0.60 μmol kg(-1)) due to neutral soil pH and Cd bioavailability was possibly also controlled by secondary sulfide formation. The results demonstrate long-term release of Cd to soil porewaters during sphalerite weathering. Under oxic conditions, Cd may be sufficiently bioavailable to contaminate crops destined for human consumption; however flooded rice production limits the impact of sphalerite contamination. Copyright © 2013 Elsevier Ltd. All rights reserved.

Confirming and identifying new loci for rice blast disease resistance using magnaporthe oryzae field isolates in the US

USDA-ARS?s Scientific Manuscript database

Quantitative trait loci (QTL) in rice play important roles in controlling rice blast disease. In the present study, 10 field isolates of the races IA1, IB1, IB17, and IC1 of U.S. rice blast fungus Magnaporthe oryzae collected in 1996 and 2009 were used to identify blast resistance QTL with a recombi...

Effect of Crop Rotation on Meloidogyne spp. and Pratylenchus spp. Populations in Strawberry Fields in Taiwan

PubMed Central

Chen, P.; Tsay, T.T.

2006-01-01

Changes in population levels of Meloidogyne hapla, M. incognita, Pratylenchus coffeae, and P. penetrans were studied in 12 strawberry fields in the Dahu region of Taiwan. Ten potential rotation crops and two cultural practices were evaluated for their effect on nematode populations and influence on strawberry yield. Rotation with rice or taro and the cultural practice of flooding and bare fallowing for four months were found to reduce nematode soil populations to two or fewer nematodes per 100 ml soil. Average strawberry yields increased between 2.4% to 6.3% following taro compared to the bare fallow treatment. Corn suppressed M. incognita and M. hapla populations and resulted in an increased in strawberry yield compared to bare fallow. Other phytopathogens also present in these fields limited taro as the rotation choice for nematode management. Results of this research and economic analysis of the input requirements for various rotation crops, corn and bare fallow were recommended as the most appropriate rotation strategies for nematode management in strawberry in this region. PMID:19259538

Seasonal variation of methane flux from coastal saline rice field with the application of different organic manures

NASA Astrophysics Data System (ADS)

Datta, A.; Yeluripati, Jagadeesh B.; Nayak, D. R.; Mahata, K. R.; Santra, S. C.; Adhya, T. K.

2013-02-01

A field experiment was conducted in an irrigated saline rice field of Gadakujang (a fishing hamlet of coastal Odisha, India, ravaged by the super cyclone of 1999 and cyclone BOB02 of 2006), to study the effects of locally available organic and fresh green manure amendment to the saline soil on methane (CH4) emission during wet and dry seasons using the conventional closed chamber flux measurement method. In a first report of this kind, CH4 emission vis-à-vis yield improvement of rice with different locally available organic manure application from coastal saline rice field soil of Odisha, is reported. The study confirms that CH4 flux from the saline soil planted to rice is significantly lower than that of irrigated inland non-saline rice field during both wet and dry seasons. Cumulative seasonal CH4 flux from different treatments of the coastal saline rice field ranged between 119.51 and 263.60 kg ha-1 during the wet season and 15.35-100.88 kg ha-1 during the dry season. Lower CH4 emission during the dry season may be attributed to the increased soil salinity (EC1:2) that went up from 0.76 dS m-1 during the wet season to 3.96 dS m-1 during the dry season. Annual CH4 emission per Mg grain yield was significantly low from plots treated with locally available green manure Morning glory (Ipomoea lacunosa) (17.27) with significantly high rice grain yield. Study indicates that Morning glory may be used as a potential green manure to increase grain yield and reduced CH4 emission from the coastal saline rice ecosystems of the tropics.

A comparison of spider communities in Bt and non-Bt rice fields.

PubMed

Lee, Sue Yeon; Kim, Seung Tae; Jung, Jong Kook; Lee, Joon-Ho

2014-06-01

To assess the potential adverse effects of a Bt rice line (Japonica rice cultivar, Nakdong) expressing a synthetic cry1Ac1 gene, C7-1-9-1-B, which was highly active against all larval stages of Cnaphalocrocis medinalis (Guenée) (Lepidoptera: Crambidae), we investigated the community structure of spiders in Bt and non-Bt rice fields during the rice-growing season in 2007 and 2008 in Chungcheongnam-do, Korea. Spiders were surveyed with a sweep net and suction device. Suction sampling captured more spiders, measured in terms of species level and abundance, than sweeping. Araneidae and Thomisidae were captured more by sweeping, and certain species were captured only by sweeping. These findings show that both suction and sweep sampling methods should be used because these methods are most likely complementary. In total, 29 species in 23 genera and nine families were identified from the 4,937 spiders collected, and both Bt and non-Bt rice fields showed a typical Korean spider assemblage. The temporal patterns of spider species richness and spider abundance were very similar between Bt and non-Bt rice, although significant differences in species richness were observed on a few occasions. Overall, spider community structure, including diversity, the dominant species, and abundance did not differ between Bt and non-Bt rice. The results of the study indicated that the transgenic Cry1Ac rice lines tested in this study had no adverse effects on the spider community structure of the rice fields.

Hydrology of a groundwater-irrigated rice field in Bangladesh: Seasonal and daily mechanisms of infiltration

NASA Astrophysics Data System (ADS)

Neumann, Rebecca B.; Polizzotto, Matthew L.; Badruzzaman, A. Borhan M.; Ali, M. Ashraf; Zhang, Zhongyuan; Harvey, Charles F.

2009-09-01

Flow through a groundwater-irrigated rice field in Bangladesh was characterized with data collected from a transect of tensiometers and time domain reflectometry sensors, novel tracer tests, infiltration tests, soil core analyses, and calculated water budgets. The combined data captured the dynamic hydrologic behavior of the rice field over an entire growing season, which included many irrigation events. Recharge to the aquifer flowed from the surface of the rice field through preferential flow paths located in the subsoil beneath the plowed surface of the field and in the bunds, the raised boundaries around the perimeter of the field. Water that remained within the soil matrix did not recharge the aquifer. Bund flow was the dominant loss for the field because the bulk hydraulic conductivity of the soil beneath the bunds was greater than that in the plowed and planted region of the rice field. Each year, farmers plow the rice fields, destroying cracks and decreasing the conductivity of the shallow soil, but leave the bunds unplowed because they follow property boundaries. We determined bund flow with a daily water balance and confirmed its importance by comparing irrigation losses among fields of different sizes and geometries and hence different ratios of perimeter to area. The perimeter-to-area ratio predicted the fraction of water lost down the bunds for these and other fields located throughout Southeast Asia. Finally, we determined the economic and environmental benefits of reducing bund flow.

[Ammonia volatilization loss of nitrogen fertilizer from rice field and wet deposition of atmospheric nitrogen in rice growing season].

PubMed

Su, Chengguo; Yin, Bin; Zhu, Zhaoliang; Shen, Qirong

2003-11-01

Plot and field experiments showed that the NH3 volatilization loss from rice field reached its maximum in 1-3 days after N-fertilization, which was affected by the local climate conditions (e.g., sun illumination, temperature, humidity, wind speed, and rainfall), fertilization time, and ammonium concentration in surface water of the rice field. The wet deposition of atmospheric nitrogen was correlated with the application rate of N fertilizer and the rainfall. The amount of nitrogen brought into soil or surface water by the wet deposition in rice growing season reached 7.5 kg.hm-2. The percent of NH4(+)-N in the wet deposition was about 39.8%-73.2%, with an average of 55.5%. There was a significant correlation of total ammonia volatilization loss with the average concentration of NH4(+)-N in wet deposition and total amount of wet deposition in rice growing season.

Methane Emissions from Bangladesh: Bridging the Gap Between Ground-based and Space-borne Estimates

NASA Astrophysics Data System (ADS)

Peters, C.; Bennartz, R.; Hornberger, G. M.

2015-12-01

Gaining an understanding of methane (CH4) emission sources and atmospheric dispersion is an essential part of climate change research. Large-scale and global studies often rely on satellite observations of column CH4 mixing ratio whereas high-spatial resolution estimates rely on ground-based measurements. Extrapolation of ground-based measurements on, for example, rice paddies to broad region scales is highly uncertain because of spatio-temporal variability. We explore the use of ground-based river stage measurements and independent satellite observations of flooded area along with satellite measurements of CH4 mixing ratio to estimate the extent of methane emissions. Bangladesh, which comprises most of the Ganges Brahmaputra Meghna (GBM) delta, is a region of particular interest for studying spatio-temporal variation of methane emissions due to (1) broadscale rice cultivation and (2) seasonal flooding and atmospheric convection during the monsoon. Bangladesh and its deltaic landscape exhibit a broad range of environmental, economic, and social circumstances that are relevant to many nations in South and Southeast Asia. We explore the seasonal enhancement of CH4 in Bangladesh using passive remote sensing spectrometer CH4 products from the SCanning Imaging Absorption SpectroMeter for Atmospheric CHartographY (SCIAMACHY) and the Atmospheric Infrared Sounder (AIRS). The seasonal variation of CH4 is compared to independent estimates of seasonal flooding from water gauge stations and space-based passive microwave water-to-land fractions from the Tropical Rainfall Measuring Mission Microwave Imager (TRMM-TMI). Annual cycles in inundation (natural and anthropogenic) and atmospheric CH4 concentrations show highly correlated seasonal signals. NOAA's HYSPLIT model is used to determine atmospheric residence time of ground CH4 fluxes. Using the satellite observations, we can narrow the large uncertainty in extrapolation of ground-based CH4 emission estimates from rice paddies, allowing for country-wide upscaling of high spatial resolution data. This approach allows for better informed carbon cycling modeling for the GBM delta and is applicable to other regions.

Effects of raising frogs and putting pest-killing lamps in paddy fields on the prevention of rice pests and diseases

NASA Astrophysics Data System (ADS)

Teng, Qing; Hu, Xue-Feng; Luo, Fan; Cao, Ming-Yang

2014-05-01

Frogs in paddy fields become less and less due to applying large amounts of pesticides and human hunting for a long time, which causes the aggravation of rice pests and diseases. A field experiment was carried out in the suburb of Shanghai to study the effects of artificially raising frogs and putting frequency oscillation pest-killing lamps in paddy fields on the prevention of rice pests and diseases. The field experiment includes three treatments. Treatment I: 150 frogs, each 20 g in weight, per 100 m2 were put in the fields; Treatment II: a frequency oscillation pest-killing lamp was put in the fields; Treatment III: no frogs and pest-killing lamps were put in the fields. All the experimental fields were operated based on the organic faming system. The amount of organic manure, 7500 kg/hm2, was applied to the fields as base fertilizer before sowing in early June, 2013. No any chemical fertilizers and pesticides were used during the entire period of rice growth. Each treatment is in triplicate and each plot is 67 m2 in area. The results are as follows: (1) During the entire growth period, the incidences of rice pests and diseases with Treatment I and II are significantly lower than those with CK (Treatment III). The incidence of chilo suppressalis with Treatment I, II and III is 0, 0.46% and 1.69%, respectively; that of cnaphalocrocis medinalis is 7.67%, 6.62% and 10.10%, respectively; that of rice sheath blight is 0, 11.11% and 5.43%, respectively; that of rice planthopper is 4.25 per hill, 5.75 per hill and 11 per hill, respectively. (2) The grain yield of the three treatments is significantly different. That of Treatment I, II and III is 5157.73 kg/hm2, 4761.60 kg/hm2 and 3645.14kg/hm2 on average, respectively. (3) Affected by frog activities, the contents of NH4-N, available P and available K in the soil with Treatment I are significantly raised. All the above suggest that artificially raising frogs in paddy fields could effectively prevent rice pests and diseases, especially reduce the incidences of rice sheath blight and chilo suppressalis, and setting pest-killing lamps could also effectively control rice pests, but not rice sheath blight, which contribute to the increase of grain yield largely. Moreover, the activity of frogs in paddy fields could improve soil fertility and increase bio-diversity. Acknowledgements: This work was supported by the National Natural Science Foundation of China (No. 41130526).

Large Scale Meteorological Pattern of Extreme Rainfall in Indonesia

NASA Astrophysics Data System (ADS)

Kuswanto, Heri; Grotjahn, Richard; Rachmi, Arinda; Suhermi, Novri; Oktania, Erma; Wijaya, Yosep

2014-05-01

Extreme Weather Events (EWEs) cause negative impacts socially, economically, and environmentally. Considering these facts, forecasting EWEs is crucial work. Indonesia has been identified as being among the countries most vulnerable to the risk of natural disasters, such as floods, heat waves, and droughts. Current forecasting of extreme events in Indonesia is carried out by interpreting synoptic maps for several fields without taking into account the link between the observed events in the 'target' area with remote conditions. This situation may cause misidentification of the event leading to an inaccurate prediction. Grotjahn and Faure (2008) compute composite maps from extreme events (including heat waves and intense rainfall) to help forecasters identify such events in model output. The composite maps show large scale meteorological patterns (LSMP) that occurred during historical EWEs. Some vital information about the EWEs can be acquired from studying such maps, in addition to providing forecaster guidance. Such maps have robust mid-latitude meteorological patterns (for Sacramento and California Central Valley, USA EWEs). We study the performance of the composite approach for tropical weather condition such as Indonesia. Initially, the composite maps are developed to identify and forecast the extreme weather events in Indramayu district- West Java, the main producer of rice in Indonesia and contributes to about 60% of the national total rice production. Studying extreme weather events happening in Indramayu is important since EWEs there affect national agricultural and fisheries activities. During a recent EWE more than a thousand houses in Indramayu suffered from serious flooding with each home more than one meter underwater. The flood also destroyed a thousand hectares of rice plantings in 5 regencies. Identifying the dates of extreme events is one of the most important steps and has to be carried out carefully. An approach has been applied to identify the dates involving observations from multiple sites (rain gauges). The approach combines the POT (Peaks Over Threshold) with 'declustering' of the data to approximate independence based on the autocorrelation structure of each rainfall series. The cross correlation among sites is considered also to develop the event's criteria yielding a rational choice of the extreme dates given the 'spotty' nature of the intense convection. Based on the identified dates, we are developing a supporting tool for forecasting extreme rainfall based on the corresponding large-scale meteorological patterns (LSMPs). The LSMPs methodology focuses on the larger-scale patterns that the model are better able to forecast, as those larger-scale patterns create the conditions fostering the local EWE. Bootstrap resampling method is applied to highlight the key features that statistically significant with the extreme events. Grotjahn, R., and G. Faure. 2008: Composite Predictor Maps of Extraordinary Weather Events in the Sacramento California Region. Weather and Forecasting. 23: 313-335.

Rivers and flooded areas identified by medium-resolution remote sensing improve risk prediction of the highly pathogenic avian influenza H5N1 in Thailand

PubMed Central

Thanapongtharm, Weerapong; Van Boeckel, Thomas P.; Biradar, Chandrashekhar; Xiao, Xiangming; Gilbert, Marius

2016-01-01

Thailand experienced several epidemic waves of the highly pathogenic avian influenza (HPAI) H5N1 between 2004 and 2005. This study investigated the role of water in the landscape, which has not been previously assessed because of a lack of high-resolution information on the distribution of flooded land at the time of the epidemic. Nine Landsat 7-Enhanced Thematic Mapper Plus scenes covering 174,610 km2 were processed using k-means unsupervised classification to map the distribution of flooded areas as well as permanent lakes and reservoirs at the time of the main epidemic HPAI H5N1 wave of October 2004. These variables, together with other factors previously identified as significantly associated with risk, were entered into an autologistic regression model in order to quantify the gain in risk explanation over previously published models. We found that, in addition to other factors previously identified as associated with risk, the proportion of land covered by flooding along with expansion of rivers and streams, derived from an existing, sub-district level (administrative level no. 3) geographical information system database, was a highly significant risk factor in this 2004 HPAI epidemic. These results suggest that water-borne transmission could have partly contributed to the spread of HPAI H5N1 during the epidemic. Future work stemming from these results should involve studies where the actual distribution of small canals, rivers, ponds, rice paddy fields and farms are mapped and tested against farm-level data with respect to HPAI H5N1. PMID:24258895

Rivers and flooded areas identified by medium-resolution remote sensing improve risk prediction of the highly pathogenic avian influenza H5N1 in Thailand.

PubMed

Thanapongtharm, Weerapong; Van Boeckel, Thomas P; Biradar, Chandrashekhar; Xiao, Xiang-Ming; Gilbert, Marius

2013-11-01

Thailand experienced several epidemic waves of the highly pathogenic avian influenza (HPAI) H5N1 between 2004 and 2005. This study investigated the role of water in the landscape, which has not been previously assessed because of a lack of high-resolution information on the distribution of flooded land at the time of the epidemic. Nine Landsat 7 - Enhanced Thematic Mapper Plus scenes covering 174,610 km(2) were processed using k-means unsupervised classification to map the distribution of flooded areas as well as permanent lakes and reservoirs at the time of the main epidemic HPAI H5N1 wave of October 2004. These variables, together with other factors previously identified as significantly associated with risk, were entered into an autologistic regression model in order to quantify the gain in risk explanation over previously published models. We found that, in addition to other factors previously identified as associated with risk, the proportion of land covered by flooding along with expansion of rivers and streams, derived from an existing, sub-district level (administrative level no. 3) geographical information system database, was a highly significant risk factor in this 2004 HPAI epidemic. These results suggest that water-borne transmission could have partly contributed to the spread of HPAI H5N1 during the epidemic. Future work stemming from these results should involve studies where the actual distribution of small canals, rivers, ponds, rice paddy fields and farms are mapped and tested against farm-level data with respect to HPAI H5N1.

Diazinon reduction and partitioning between water, sediment and vegetation in stormwater runoff mitigation through rice fields.

PubMed

Moore, Matthew T; Kröger, Robert; Cooper, Charles M; Cullum, Robert F; Smith, Sammie; Locke, Martin A

2009-11-01

Contamination of surface waters by pesticides is a concern in the United States and around the world. Innovative mitigation strategies are needed to remediate this potential environmental contaminant. One potential solution is to divert pesticide-laden drainage or surface water through agricultural rice fields. With a hydroperiod, hydrosoil and hydrophyte (rice), these systems serve essentially as a type of constructed wetland. In both summer and fall experiments, diazinon-amended water was diverted through two rice ponds at the University of Mississippi Field Station. Likewise, a non-vegetated control pond was amended with diazinon-laden water. Water, sediment and plant samples were taken spatially and temporally to determine the distribution of diazinon within systems. Outflow diazinon concentrations decreased significantly (P < 0.05) from inflow in both vegetated ponds for both preharvest and post-harvest experiments. Although sorption to rice plants was minimal in the overall mass distribution of diazinon (1-3%), temporal data indicated that diazinon concentrations reached the outflow sediment of the non-vegetated control twice as fast as in either vegetated (rice) system. In both vegetated systems, sediment diazinon concentrations decreased (77 and 100%) from inflow to outflow, while a decrease of <2% was noted in the non-vegetated control. Diversion of pesticide-contaminated water through rice fields demonstrated potential as a low-cost, environmentally efficient mitigation practice. Studies on these systems are continuing to evaluate the optimal chemical retention time for rice field mitigation, as well as diazinon transfer to rice grain seeds that may be used as a food source.

Effect of rice-cooking water to the daily arsenic intake in Bangladesh: results of field surveys and rice-cooking experiments.

PubMed

Ohno, K; Matsuo, Y; Kimura, T; Yanase, T; Rahman, M H; Magara, Y; Matsushita, T; Matsui, Y

2009-01-01

The effect of rice-cooking water to the daily arsenic intake of Bangladeshi people was investigated. At the first field survey, uncooked rice and cooked rice of 29 families were collected. Their arsenic concentrations were 0.22+/-0.11 and 0.26+/-0.15 mg/kg dry wt, respectively. In 15 families, arsenic concentration in rice increased after cooking. Good correlation (R(2)=0.89) was observed between arsenic in rice-cooking water and the difference of arsenic concentration in rice by cooking. In the second survey, we collected one-day duplicated food of 18 families. As a result, we estimated that six of 18 families likely used the arsenic contaminated water for cooking rice even they drank less arsenic-contaminated water for drinking purpose. We also conducted rice-cooking experiments in the laboratory, changing arsenic concentration in rice-cooking water. Clear linear relationships were obtained between the arsenic in rice-cooking water and the difference of arsenic concentration in rice by cooking. Factors that affect arsenic concentration in cooked rice are suggested as follows: (1) arsenic concentration in uncooked rice, (2) that in rice-cooking water, (3) difference in water content of rice before and after cooking, and (4) types of rice, especially, the difference between parboiled and non-parboiled rice.

Single-wavelength based rice leaf color analyzer for nitrogen status estimation

NASA Astrophysics Data System (ADS)

Sumriddetchkajorn, Sarun; Intaravanne, Yuttana

2014-02-01

With the need of a tool for efficient nitrogen (N) fertilizer management in the rice field, this paper proposes a low-cost compact single-wavelength based colorimeter that can be used to indicate the specified six color levels of a rice leaf associated with the desired amount of N fertilizer for the rice field. Our key design is in a reflective optical architecture that allows us to investigate the amount of light scattered from only one side of the rice leaf. We also show how we implement this needed rice leaf color analyzer by integrating an off-the-shelf 562-nm wavelength light emitting diode (LED), a silicon photodiode, an 8-bit microcontroller, and a 6×1 LED panel in a compact plastic package. Field test results in rice fields confirm that leaf color levels of 1, 2, 3, 5, and 6 are effectively identified and their corresponding amount of N fertilizer can be determined. For the leaf color level of 4, our single-wavelength based rice leaf color analyzer sometimes indicates a higher color level of 5 whose suggested amount of N fertilizer is equal to that for the leaf color level of 4. Other key features include ease of use and upgradability for different color levels.

First records of a field experiment on fertilizer effects on methane emission from rice fields in Hunan-Province (PR China)

NASA Astrophysics Data System (ADS)

Wassmann, R.; Wang, M. X.; Shangguan, X. J.; Xie, X. L.; Shen, R. X.; Wang, Y. S.; Papen, H.; Rennenberg, H.; Seiler, W.

Fertilizer effects on methane emission from Chinese rice fields were investigated by a praxis-oriented approach applying balanced amendments of N, P and K. The data set obtained covered the emission rates of app. one month in early rice and one month in late rice 1991. An intercomparison between the 4 treatments showed pronounced differences in the magnitudes of methane emission rates. The combined organic/mineral fertilizer application, commonly used as local farming practice, resulted in relatively high seasonal averages of methane emission rates (26.5 mg CH4 m-2 h-1 in early rice and 50.1 mg CH4 m-2 h-1 in late rice). The lowest emission rates were observed in the plot with pure mineral fertilization (6.5 mg CH4 m-2 h-1 in early rice and 14.3 mg CH4 m-2 h-1 in late rice). Pure organic fertilizers by unfermented substances yielded the highest methane emission rates of all field trials (38.6 mg CH4 m-2 h-1 in early rice and 56.2 CH4 m-2 h-1 in late rice). The fertilization with fermented material derived from biogas generators resulted in substantially lower emission rates than the other trials with organic amendments, the seasonal averages corresponded to 15.9 mg CH4 m-2 h-1 (early rice) and 22.5 mg CH4 m-2 h-1 (late rice). Interpretation of the results can be obtained from the different potentials of these fertilizers for methane production. Based on this concept the different methane emission rates observed with organic/mineral, pure mineral and pure unfermented-organic fertilizers could directly be attributed to the different quantities of organic matter incorporated into the soil. The low methane emission from the plot treated with fermented material could be explained by a depletion of potential methane precursors resulting from the preceding fermentation. The results of this investigation provide evidence that the extensive use of specific chemical fertilizers and the application of sludge from the operation of biogas generators could lead to a net reduction of the methane emission from rice fields.

Diversity of Cultivable Methane-Oxidizing Bacteria in Microsites of a Rice Paddy Field: Investigation by Cultivation Method and Fluorescence in situ Hybridization (FISH)

PubMed Central

Dianou, Dayéri; Ueno, Chihoko; Ogiso, Takuya; Kimura, Makoto; Asakawa, Susumu

2012-01-01

The diversity of cultivable methane-oxidizing bacteria (MOB) in the rice paddy field ecosystem was investigated by combined culture-dependent and fluorescence in situ hybridization (FISH) techniques. Seven microsites of a Japanese rice paddy field were the focus of the study: floodwater, surface soil, bulk soil, rhizosphere soil, root, basal stem of rice plant, and rice stumps of previous harvest. Based on pmoA gene analysis and transmission electron microscopy (TEM), four type I, and nine type II MOB isolates were obtained from the highest dilution series of enrichment cultures. The type I MOB isolates included a novel species in the genus Methylomonas from floodwater and this is the first type I MOB strain isolated from floodwater of a rice paddy field. In the type I MOB, two isolates from stumps were closely related to Methylomonas spp.; one isolate obtained from rhizosphere soil was most related to Methyloccocus-Methylocaldum-Methylogaea clade. Almost all the type II MOB isolates were related to Methylocystis methanotrophs. FISH confirmed the presence of both types I and II MOB in all the microsites and in the related enrichment cultures. The study reported, for the first time, the diversity of cultivable methanotrophs including a novel species of type I MOB in rice paddy field compartments. Refining growth media and culture conditions, in combination with molecular approaches, will allow us to broaden our knowledge on the MOB community in the rice paddy field ecosystem and consequently to implement strategies for mitigating CH4 emission from this ecosystem. PMID:22446309

Insights into molecular mechanism of blast resistance in weedy rice

USDA-ARS?s Scientific Manuscript database

Weedy rice is a serious pest in direct-seeded rice fields in the U.S. and worldwide. Under suitable conditions, weedy rice can reduce crop yields up to 70%. However, weedy rice may carry novel disease resistance genes. Rice blast disease caused by the fungus Magnaporthe oryzae is a major disease wo...

Molecular evolution of the sh4 shattering locus in U.S. weedy rice

USDA-ARS?s Scientific Manuscript database

Cultivated rice fields worldwide are plagued with weedy rice, a congeneric weed of cultivated rice (Oryza sativa L.). The persistence of weedy rice has been attributed, in part, to its ability to shatter (disperse) seed prior to crop harvesting. In the United States, separately evolved weedy rice g...

Impact of Rice Paddy Areas Decrease on Local Climate over Taiwan

NASA Astrophysics Data System (ADS)

Lo, M. H.; Wen, W. H.; Chen, C. C.

2014-12-01

Agricultural irrigation practice is one of the important anthropogenic processes in the land surface modeling. Irrigation can decrease local surface temperature with alternating surface energy partitioning. Rice paddy is the major food crop in Asian monsoon region and rice is grown under flooded conditions during the growing season; hence, the rice paddy can be considered as an open water body, which has more impacts on the surface energy budget than other cropland does. In this study, we explore how the rice paddy area changes affect Taiwan's regional climate from both observational data and numerical modeling exercise. The Weather Research and Forecasting (WRF) model is utilized to explore impacts of rice paddy area changes on the regional climate, and energy and water budget changes. In addition, temperature datasets from six automatic weather stations in the northern Taiwan and two stations in the southern Taiwan are analyzed in this study to explore how the Daily Temperature Range (DTR) changes with the decreased rice paddy areas. Previous studies show that due to the urban heat island effect, aerosol direct and indirect effects, and global warming, the DTR has decreased in the past 4 decades observed from most of the weather stations around Taiwan. However, the declined rice paddy area may increase the DTR with higher Bowen ratio during the daytime. Preliminary results show that DTR is decreased in weather stations near the urban area, but increased in weather stations near fallow areas in the past 20 years. It shows that different land use changes may have opposite impacts on local and regional climate.

Alternate wetting and drying practice for reducing greenhouse gas emissions in flooded rice agroecosystems

NASA Astrophysics Data System (ADS)

Adviento-Borbe, A.; Anders, M. M.; Runkle, B.; Reba, M. L.; Suvocarev, K.; Massey, J. H.; Linquist, B.

2017-12-01

Alternate wetting and drying management (AWD) practices which minimize flooding times have been shown to reduce both CH4 emissions and water use but effects on N2O emissions and grain yields are variable. Grain yield and seasonal CH4 and N2O emissions were measured from AWD treatments with various soil water thresholds and conventionally flooded water treatment in two commercial farms in Arkansas and in an experimental field in Biggs, CA during 2015 and 2016 crop seasons. Methane and N2O emissions were measured using vented flux chamber and gas chromatography methods. Grain yields ( 10 Mg ha-1) were similar in AWD and conventional water treatments. Total CH4 emissions ranged from 21 to 338 kg CH4-C ha-1 season-1. The AWD practice reduced growing season CH4 emissions by 44-73% while N2O emissions remained low and represented only <2% of the total seasonal global warming potential in all treatments. The long aerobic periods and proper implementation of AWD drain events showed greatest CH4 reduction. However, N2O emissions can increase if soil inorganic N levels are potentially high prior to initiating the dry cycle. Our results showed that AWD can reduce CH4 and N2O emissions while maintaining optimal grain yields. However, adoption of AWD to mitigate greenhouse gas emissions (GHG) in commercial farms requires proper implementation of AWD to avoid risk of yield loss and high GHG emissions.

Interaction between sulfur and lead in toxicity, iron plaque formation and lead accumulation in rice plant.

PubMed

Yang, Junxing; Liu, Zhiyan; Wan, Xiaoming; Zheng, Guodi; Yang, Jun; Zhang, Hanzhi; Guo, Lin; Wang, Xuedong; Zhou, Xiaoyong; Guo, Qingjun; Xu, Ruixiang; Zhou, Guangdong; Peters, Marc; Zhu, Guangxu; Wei, Rongfei; Tian, Liyan; Han, Xiaokun

2016-06-01

Human activities have resulted in lead and sulfur accumulation in paddy soils in parts of southern China. A combined soil-sand pot experiment was conducted to investigate the influence of S supply on iron plaque formation and Pb accumulation in rice (Oryza sativa L.) under two Pb levels (0 and 600 mg kg(-1)), combined with four S concentrations (0, 30, 60, and 120 mg kg(-1)). Results showed that S supply significantly decreased Pb accumulation in straw and grains of rice. This result may be attributed to the enhancement of Fe plaque formation, decrease of Pb availability in soil, and increase of reduced glutathione (GSH) in rice leaves. Moderate S supply (30 mg kg(-1)) significantly increased Fe plaque formation on the root surface and in the rhizosphere, whereas excessive S supply (60 and 120 mg kg(-1)) significantly decreased the amounts of iron plaque on the root surface. Sulfur supply significantly enhanced the GSH contents in leaves of rice plants under Pb treatment. With excessive S application, the rice root acted as a more effective barrier to Pb accumulation compared with iron plaque. Excessive S supply may result in a higher monosulfide toxicity and decreased iron plaque formation on the root surface during flooded conditions. However, excessive S supply could effectively decrease Pb availability in soils and reduce Pb accumulation in rice plants. Copyright © 2016 Elsevier Inc. All rights reserved.

In-Situ Quantification of Microbial Processes Controlling Methane Emissions From Rice Plants

NASA Astrophysics Data System (ADS)

Schroth, M. H.; Cho, R.; Zeyer, J. A.

2011-12-01

Methane is an important greenhouse gas contributing to global warming. Among other sources, rice (paddy) soils represent a major nonpoint source of biogenic methane. In flooded paddy soils methane is produced under anaerobic conditions. Conversely, methanotrophic microorganisms oxidize methane to carbon dioxide in the root zone of rice plants, thus reducing overall methane emissions to the atmosphere. We present a novel combination of methods to quantify methanogenesis and methane oxidation in paddy soils and to link methane turnover to net emissions of rice plants. To quantify methane turnover in the presence of high methane background concentrations, small-scale push-pull tests (PPTs) were conducted in paddy soils using stable isotope-labeled substrates. Deuterated acetate and 13-C bicarbonate were employed to discern and quantify acetoclastic and hydrogenotrophic methanogenesis, while 13-C methane was employed to quantify methane oxidation. During 2.5 hr-long PPTs, 140 mL of a test solution containing labeled substrates and nonreactive tracers (Ar, Br-) was injected into paddy soils of potted rice plants. After a short rest period, 480 mL of test solution/pore water mixture was extracted from the same location. Methane turnover was then computed from extraction-phase breakthrough curves of substrates and/or products, and nonreactive tracers. To link methane turnover to net emissions, methane emissions from paddy soils and rice plants were individually determined immediately preceding PPTs using static flux chambers. We will present results of a series of experiments conducted in four different potted rice plants. Preliminary results indicate substantial variability in methane turnover and net emission between different rice plants. The employed combination of methods appears to provide a robust means to quantitatively link methane turnover in paddy soils to net emissions from rice plants.

Spatial Field Variability Mapping of Rice Crop using Clustering Technique from Space Borne Hyperspectral Data

NASA Astrophysics Data System (ADS)

Moharana, S.; Dutta, S.

2015-12-01

Precision farming refers to field-specific management of an agricultural crop at a spatial scale with an aim to get the highest achievable yield and to achieve this spatial information on field variability is essential. The difficulty in mapping of spatial variability occurring within an agriculture field can be revealed by employing spectral techniques in hyperspectral imagery rather than multispectral imagery. However an advanced algorithm needs to be developed to fully make use of the rich information content in hyperspectral data. In the present study, potential of hyperspectral data acquired from space platform was examined to map the field variation of paddy crop and its species discrimination. This high dimensional data comprising 242 spectral narrow bands with 30m ground resolution Hyperion L1R product acquired for Assam, India (30th Sept and 3rd Oct, 2014) were allowed for necessary pre-processing steps followed by geometric correction using Hyperion L1GST product. Finally an atmospherically corrected and spatially deduced image consisting of 112 band was obtained. By employing an advanced clustering algorithm, 12 different clusters of spectral waveforms of the crop were generated from six paddy fields for each images. The findings showed that, some clusters were well discriminated representing specific rice genotypes and some clusters were mixed treating as a single rice genotype. As vegetation index (VI) is the best indicator of vegetation mapping, three ratio based VI maps were also generated and unsupervised classification was performed for it. The so obtained 12 clusters of paddy crop were mapped spatially to the derived VI maps. From these findings, the existence of heterogeneity was clearly captured in one of the 6 rice plots (rice plot no. 1) while heterogeneity was observed in rest of the 5 rice plots. The degree of heterogeneous was found more in rice plot no.6 as compared to other plots. Subsequently, spatial variability of paddy field was observed in different plot levels in the paddy fields from the two images. However, no such significant variation in rice genotypes at growth level was observed. Hence, the spectral information acquired from space platform can be linearly scaled to map the variation in field levels of rice crop which will be act as an informative system for rice agriculture practice.

Feral rice from introgression of weedy rice genes into transgenic herbicide-resistant hybrid-rice progeny.

PubMed

Zhang, Jingxu; Kang, Ye; Valverde, Bernal E; Dai, Weimin; Song, Xiaoling; Qiang, Sheng

2018-06-05

Pollen-mediated herbicide-resistance transgene flow occurs bidirectionally between transgenic cultivated rice and weedy rice. The potential risk of weedy traits introgressing into hybrid rice is underestimated and poorly understood. Two of each glufosinate-resistant transgenic rice varieties and hybrid rice (F1) and their succeeding generations (F2-F4) were planted for three years in weedy-rice-free field plots adjacent to experimental weedy-rice fields. Weedy-rice-like (feral) plants, both glufosinate-resistant and with red-pericarp seed, were initially found only among the F3 generations of the two glufosinate-resistant transgenic hybrid rice. The composite fitness (an index based on eight productivity and weediness traits) of the feral progeny was significantly higher than that of glufosinate-resistant transgenic hybrid rice (the original female parent of feral progeny) under common monoculture garden conditions. Hybrid rice progeny segregated into individuals of variable height and extended flowering. Hybrid rice F2 generations had higher outcrossing rates by pollen reception (0.96%-1.65%) than their progenitors (0.07%-0.98%). Herbicide-resistant weedy rice can rapidly arise by pollen-mediated gene flow from weedy to transgenic hybrid rice. Their segregating pollen-receptive progeny pose greater agro-ecological risk than transgenic varieties. The safety assessment and management regulations for transgenic hybrid rice should take into account the risk of bidirectional gene flow.

Utilizing NASA Earth Observations to Enhance Flood Impact Products and Mitigation in the Lower Mekong Water Basin

NASA Astrophysics Data System (ADS)

Doyle, C.; Gao, M.; Spruce, J.; Bolten, J. D.; Weber, S.

2014-12-01

This presentation discusses results of a project to develop a near real time flood monitoring capability for the Lower Mekong Water Basin (LMB), the largest river basin in Southeast Asia and home to more than sixty million people. The region has seen rapid population growth and socio-economic development, fueling unsustainable deforestation, agricultural expansion, and stream-flow regulation. The basin supports substantial rice farming and other agrarian activities, which heavily depend upon seasonal flooding. But, floods due to typhoons and other severe weather events can result in disasters that cost millions of dollars and cause hardships to millions of people. This study uses near real time and historical Aqua and Terra MODIS 250-m resolution Normalized Difference Vegetation Index (NDVI) products to map flood and drought impact within the LMB. In doing so, NDVI change products are derived by comparing from NDVI during the wet season to a baseline NDVI from the dry season. The method records flood events, which cause drastic decreases in NDVI compared to non-flooded conditions. NDVI change product computation was automated for updating a near real-time system, as part of the Committee on Earth Observing Satellites Disaster Risk Management Observation Strategy. The system is a web-based 'Flood Dashboard that will showcase MODIS flood monitoring products, along with other flood mapping and weather data products. This flood dashboard enables end-users to view and assess a variety of geospatial data to monitor floods and flood impacts in near real-time, as well provides a platform for further data aggregation for flood prediction modeling and post-event assessment.

A possible alternative method for collecting mosquito larvae in rice fields

PubMed Central

Robert, Vincent; Goff, Gilbert Le; Ariey, Frédéric; Duchemin, Jean-Bernard

2002-01-01

Background Rice fields are efficient breeding places for malaria vectors in Madagascar. In order to establish as easily as possible if a rice field is an effective larval site for anophelines, we compared classical dipping versus a net as methods of collecting larvae. Results Using similar collecting procedures, we found that the total number of anopheline larvae collected with the net was exactly double (174/87) that collected by dipping. The number of anopheline species collected was also greater with a net. Conclusions The net is an effective means of collecting anopheline larvae and can be used for qualitative ecological studies and to rapidly determine which rice fields are containing malaria vectors. PMID:12057018

The surface renewal method for better spatial resolution of evapotranspiration measurements

NASA Astrophysics Data System (ADS)

Suvocarev, K.; Fischer, M.; Massey, J. H.; Reba, M. L.; Runkle, B.

2017-12-01

Evaluating feasible irrigation strategies when water is scarce requires measurements or estimations of evapotranspiration (ET). Direct observations of ET from agricultural fields are preferred, and micrometeorological methods such as eddy covariance (EC) provide a high quality, continuous time series of ET. However, when replicates of the measurements are needed to compare irrigation strategies, the cost of such experiments is often prohibitive and limits experimental scope. An alternative micrometeorological approach to ET, the surface renewal (SR) method, may be reduced to a thermocouple and a propeller anemometer (Castellvi and Snyder, 2009). In this case, net radiation, soil and sensible heat flux (H) are measured and latent heat flux (an energy equivalent for ET) is estimated as the residual of the surface energy-balance equation. In our experiment, thermocouples (Type E Fine-Wire Thermocouple, FW3) were deployed next to the EC system and combined with mean horizontal wind speed measurements to obtain H using SR method for three weeks. After compensating the temperature signal for non-ideal frequency response in the wavelet half-plane and correcting the sonic anemometer for the flow distortion (Horst et al., 2015), the SR H fluxes compared well to those measured by EC (r2 = 0.9, slope = 0.92). This result encouraged us to install thermocouples over 16 rice fields under different irrigation treatments (continuous cascade flood, continuous multiple inlet rice irrigation, alternate wetting and drying, and furrow irrigation). The EC measurements with net radiometer and soil heat flux plates are deployed at three of these fields to provide a direct comparison. The measurement campaign will finish soon and the data will be processed to evaluate the SR approach for ET estimation. The results will be used to show better spatial resolution of ET measurements to support irrigation decisions in agricultural crops.

Hydraulic and hydrogeochemical characteristics of a riverbank filtration site in rural India.

PubMed

Boving, T B; Choudri, B S; Cady, P; Cording, A; Patil, K; Reddy, Veerabaswant

2014-07-01

A riverbank filtration (RBF) system was tested along the Kali River in rural part of the state of Karnataka in India. The polluted river and water from open wells served the local population as their principal irrigation water resource and some used it for drinking. Four RBF wells (up to 25 m deep) were installed. The mean hydraulic conductivity of the well field is 6.3 x 10(-3) cm/s and, based on Darcy's law, the water travel time from the river to the principal RBF well (MW3) is 45.2 days. A mixing model based on dissolved silica concentrations indicated that, depending on the distance from the river and closeness to irrigated rice fields, approximately 27 to 73% of the well water originated from groundwater. Stable isotopic data indicates that a fraction of the water was drawn in from the nearby rice fields that were irrigated with river water. Relative to preexisting drinking water sources (Kali River and an open well), RBF well water showed lower concentration of dissolved metals (60.1% zinc, 27.8% cadmium, 83.9% lead, 75.5% copper, 100% chromium). This study demonstrates that RBF technology can produce high-quality water from low-quality surface water sources in a rural, tropical setting typical for many emerging economies. Further, in parts of the world where flood irrigation is common, RBF well water may draw in infiltrated irrigation water, which possibly alters its geochemical composition. A combination of more than one mixing model, silica together with stable isotopes, was shown to be useful explaining the origin of the RBF water at this study site.

[Characteristics of nitrogen and phosphorus runoff losses from croplands with different planting patterns in a riverine plain area of Zhejiang Province, East China].

PubMed

Zhang, Ming-Kui; Wang, Yang; Huang, Chao

2011-12-01

By the method of site-specific observation, and selecting 27 field plots with 7 planting patterns in Shaoxing county of Zhejiang Province as test objects, this paper studied the characteristics of nitrogen (N) and phosphorous (P) runoff losses, loads, and their affecting factors in the croplands with different planting patterns in riverine plain area of the Province under natural rainfall. The mean annual runoff loads of total P, dissolved P, and particulate P from the field plots were 4.75, 0.74 and 4.01 kg x hm(-2), respectively, and the load of particulate P was much higher than that of dissolved P. The mean annual runoff loads of total N, dissolved total N, dissolved organic N, NH4(+)-N, and NO3(-)-N were 21.87, 17.19, 0.61, 3.63 and 12.95 kg x hm(-2), respectively, and the load of different fractions of dissolved total N was in the sequence of NO3(-)-N > NH4(+)-N > dissolved organic N. As for the field plots with different planting patterns, the runoff loads of total N, dissolved total N, dissolved organic N, and NO3(-)-N were in the sequence of fallow land < nursery land < single late rice field < double rice field < rape (or wheat)-single late rice field < wheat-early rice-late rice field < vegetable field, while those of total P and particulate P were in the sequence of fallow land < nursery land < single late rice field and double rice field < wheat-early rice-late rice field < rape (wheat)-single late rice field < vegetable field. No significant difference was observed in the load of water-dissolved P among the test plots with different planting patterns. The runoff losses of N and P mainly occurred in crop growth period, and the proportions of N and P losses in the growth period increased with increasing multiple crop index. The runoff losses of total N, dissolved N, and NO3(-)-N were mainly related to the application rate of N fertilizer, and soil NO3(-)-N content also had obvious effects on the runoff losses of total N and dissolved N. The runoff loss of dissolved organic N was related not only to N application rate, but also to soil total N and organic carbon. The runoff loss of NH4(+)-N was mainly related to soil available NH4(+)-N, but not related to N application rate. The runoff losses of total P and particulate P were related to both P application rate and soil available P, while the runoff loss of water dissolved P was less related to P application rate but had relations to soil total P and available P.

Evolution and mechanisms of plant tolerance to flooding stress

PubMed Central

Jackson, Michael B.; Ishizawa, Kimiharu; Ito, Osamu

2009-01-01

Background In recognition of the 200th anniversary of Charles Darwin's birth, this short article on flooding stress acknowledges not only Darwin's great contribution to the concept of evolution but also to the study of plant physiology. In modern biology, Darwin-inspired reductionist physiology continues to shed light on mechanisms that confer competitive advantage in many varied and challenging environments, including those where flooding is prevalent. Scope Mild flooding is experienced by most land plants but as its severity increases, fewer species are able to grow and survive. At the extreme, a highly exclusive aquatic lifestyle appears to have evolved numerous times over the past 120 million years. Although only 1–2% of angiosperms are aquatics, some of their adaptive characteristics are also seen in those adopting an amphibious lifestyle where flooding is less frequent. Lowland rice, the staple cereal for much of tropical Asia falls into this category. But, even amongst dry-land dwellers, or certain of their sub-populations, modest tolerance to occasional flooding is to be found, for example in wheat. The collection of papers summarized in this article describes advances to the understanding of mechanisms that explain flooding tolerance in aquatic, amphibious and dry-land plants. Work to develop more tolerant crops or manage flood-prone environments more effectively is also included. The experimental approaches range from molecular analyses, through biochemistry and metabolomics to whole-plant physiology, plant breeding and ecology. PMID:19145714

Pesticides and pesticide degradation products in stormwater runoff: Sacramento River Basin, California

USGS Publications Warehouse

Domagalski, Joseph L.

1996-01-01

Pesticides in stormwater runoff, within the Sacramento River Basin, California, were assessed during a storm that occurred in January 1994. Two organophosphate insecticides (diazinon and methidathion), two carbamate pesticides (molinate and carbofuran), and one triazine herbicide (simazine) were detected. Organophosphate pesticide concentrations increased with the rising stage of the hydrographs; peak concentrations were measured near peak discharge. Diazinon oxon, a toxic degradation product of diazinon, made up approximately 1 to 3 percent of the diazinon load. The Feather River was the principal source of organophosphate pesticides to the Sacramento River during this storm. The concentrations of molinate and carbofuran, pesticides applied to rice fields during May and June, were relatively constant during and after the storm. Their presence in surface water was attributed to the flooding and subsequent drainage, as a management practice to degrade rice stubble prior to the next planting. A photodegradation product of molinate, 4-keto molinate, was in all samples where molinate was detected and made up approximately 50 percent of the total molinate load. Simazine, a herbicide used in orchards and to control weeds along the roadways, was detected in the storm runoff, but it was not possible to differentiate the two sources of that pesticide to the Sacramento River.

Influence of elevated carbon dioxide and temperature on belowground carbon allocation and enzyme activities in tropical flooded soil planted with rice.

PubMed

Bhattacharyya, P; Roy, K S; Neogi, S; Manna, M C; Adhya, T K; Rao, K S; Nayak, A K

2013-10-01

Changes in the soil labile carbon fractions and soil biochemical properties to elevated carbon dioxide (CO2) and temperature reflect the changes in the functional capacity of soil ecosystems. The belowground root system and root-derived carbon products are the key factors for the rhizospheric carbon dynamics under elevated CO2 condition. However, the relationship between interactive effects of elevated CO2 and temperature on belowground soil carbon accrual is not very clear. To address this issue, a field experiment was laid out to study the changes of carbon allocation in tropical rice soil (Aeric Endoaquept) under elevated CO2 and elevated CO2 + elevated temperature conditions in open top chambers (OTCs). There were significant increase of root biomass by 39 and 44 % under elevated CO2 and elevated CO2 + temperature compared to ambient condition, respectively. A significant increase (55 %) of total organic carbon in the root exudates under elevated CO2 + temperature was noticed. Carbon dioxide enrichment associated with elevated temperature significantly increased soil labile carbon, microbial biomass carbon, and activities of carbon-transforming enzyme like β-glucosidase. Highly significant correlations were noticed among the different soil enzymes and soil labile carbon fractions.

Rice Cluster I, an Important Group of Archaea Producing Methane in Rice Fields

NASA Astrophysics Data System (ADS)

Conrad, R.

2006-12-01

Rice fields are an important source for the greenhouse gas methane. Methane is a major degradation product of organic matter in the anoxic soil, is partially oxidized in the rhizosphere and is emitted into the atmosphere through the aerenchyma system of the plants. Anaerobic degradation of organic matter by fermenting bacteria eventually results in the production of acetate and hydrogen, the two major substrates for microbial methanogenesis. The community of methanogenic archaea consists of several major orders or families including hydrogen-utilizing Rice Cluster-I (RC-I). Environmental conditions affect the methanogenic degradation process and the community structure of the methanogenic archaea in soil and rhizosphere. For example, populations of acetoclastic Methanosaetaceae and Methanosarcinaceae are enhanced by low and high acetate concentrations, respectively. Stable isotope probing of 16S rRNA showed that RC-I methanogens are mainly active on rice roots and at low H2 concentrations. Growth and population size is largely consistent with energetic conditions. RC-I methanogens on roots seem to be responsible for methane production from plant photosynthates that account for a major part of the emitted methane. Populations of RC-I methanogens in rice field soil are also enhanced at elevated temperatures (40-50°C). Moderately thermophilic members of RC-I methanogens or other methanogenic families were found to be ubiquitously present in soils from rice fields and river marshes. The genome of a RC-I methanogen was completely sequenced out of an enrichment culture using a metagenome approach. Genes found are consistent with life in the rhizosphere and in temporarily drained, oxic soil. We found that the methanogenic community structure on the rice roots is mainly determined by the respective community structure of the soil, but is in addition affected by the rice cultivar. Rice microcosms in which soil and rice roots are mainly colonized by RC-I methanogens produce and emit more methane than when inhabited by Methanomicrobiales, indicating that the methanogenic archaeal community is an important factor for methane emission from rice fields.

Inorganic Nitrogen Leaching from Organic and Conventional Rice Production on a Newly Claimed Calciustoll in Central Asia

PubMed Central

Meng, Fanqiao; Olesen, Jørgen E.; Sun, Xiangping; Wu, Wenliang

2014-01-01

Characterizing the dynamics of nitrogen (N) leaching from organic and conventional paddy fields is necessary to optimize fertilization and to evaluate the impact of these contrasting farming systems on water bodies. We assessed N leaching in organic versus conventional rice production systems of the Ili River Valley, a representative aquatic ecosystem of Central Asia. The N leaching and overall performance of these systems were measured during 2009, using a randomized block experiment with five treatments. PVC pipes were installed at soil depths of 50 and 180 cm to collect percolation water from flooded organic and conventional paddies, and inorganic N (NH4-N+NO3-N) was analyzed. Two high-concentration peaks of NH4-N were observed in all treatments: one during early tillering and a second during flowering. A third peak at the mid-tillering stage was observed only under conventional fertilization. NO3-N concentrations were highest at transplant and then declined until harvest. At the 50 cm soil depth, NO3-N concentration was 21–42% higher than NH4-N in percolation water from organic paddies, while NH4-N and NO3-N concentrations were similar for the conventional and control treatments. At the depth of 180 cm, NH4-N and NO3-N were the predominant inorganic N for organic and conventional paddies, respectively. Inorganic N concentrations decreased with soil depth, but this attenuation was more marked in organic than in conventional paddies. Conventional paddies leached a higher percentage of applied N (0.78%) than did organic treatments (0.32–0.60%), but the two farming systems leached a similar amount of inorganic N per unit yield (0.21–0.34 kg N Mg−1 rice grains). Conventional production showed higher N utilization efficiency compared to fertilized organic treatments. These results suggest that organic rice production in the Ili River Valley is unlikely to reduce inorganic N leaching, if high crop yields similar to conventional rice production are to be maintained. PMID:24858826

Combined role of heat and water stresses on wheat, maize and rice inter-annual variability and trend from 1980 to 2010.

NASA Astrophysics Data System (ADS)

Zampieri, M.; Ceglar, A., , Dr; Dentener, F., , Dr; van den Berg, M., , Dr; Toreti, A., , Dr

2017-12-01

Heat waves and drought are often considered the most damaging climatic stressors for wheat and maize. In this study, based on data derived from observations, we characterize and attribute the effects of these climate extremes on wheat and maize yield anomalies (at global and national scales) with respect to the mean trend from 1980 to 2010. Using a combination of up-to-date heat wave and drought indexes (i.e. the Heat Magnitude Day, HMD, and the Standardized Precipitation Evapotranspiration Index, SPEI), we have developed a composite indicator (i.e. the Combined Stress Index, CSI) that is able to capture the spatio-temporal characteristics of the underlying physical processes in the different agro-climatic regions of the world. At the global level, our diagnostic explains the 42% and the 50% of the inter-annual wheat and maize production variabilities, respectively. The relative importance of heat stress and drought in determining the yield anomalies depends on the region. Compared to maize, and in contrast to common perception, water excess affects wheat production more than drought in several countries. The index definition can be modified in order to quantify the role of combined heat and water stress events occurrence in determining the recorded yield trends as well. Climate change is increasingly limiting maize yields in several countries, especially in Europe and China. A comparable opposite signal, albeit less statistically significant, is found for the USA, which is the main world producer. As for rice, we provide a statistical evidence pointing out to the importance of considering the interactions with the horizontal surface waters fluxes carried out by the rivers. In fact, compared to wheat and maize, the CSI statistical skills in explaining rice production variability are quite reduced. This issue is particularly relevant in paddy fields and flooded lowlands where rice is mainly grown. Therefore, we have modified the procedure including a proxy for the surface freshwater availability i.e. the Standardized River Discharge Index (SRDI), defined in this study. The modified CSI explains the 35% of the global rice production inter-annual anomalies.

Elucidation of molecular dynamics of invasive species of rice

USDA-ARS?s Scientific Manuscript database

Cultivated rice fields are aggressively invaded by weedy rice in the U.S. and worldwide. Weedy rice results in loss of yield and seed contamination. The molecular dynamics of the evolutionary adaptive traits of weedy rice are not fully understood. To understand the molecular basis and identify the i...

Molecular evolution of flowering time loci in U.S. weedy rice

USDA-ARS?s Scientific Manuscript database

Weedy rice is a persistent weed of cultivated rice (Oryza sativa) fields worldwide, which competes with the crop and drastically reduces rice yields. Within the US, two main populations of genetically differentiated weedy rice exist, the straw-hulled (SH) group and the black-hulled awned (BHA) grou...

Model development for nutrient loading estimates from paddy rice fields in Korea.

PubMed

Jeon, Ji-Hong; Yoon, Chun G; Ham, Jong-Hwa; Jung, Kwang-Wook

2004-01-01

A field experiment was performed to evaluate water and nutrient balances in paddy rice culture operations during 2001-2002. The water balance analysis indicated that about half (50-60%) of the total outflow was lost by surface drainage, with the remainder occurring by evapotranspiration (490-530 mm). The surface drainage from paddy fields was mainly caused by rainfall and forced-drainage, and in particular, the runoff during early rice culture periods depends more on the forced-drainage due to fertilization practices. Most of the total phosphorus (T-P) inflow was supplied by fertilization at transplanting, while the total nitrogen (T-N) inflow was supplied by the three fertilizations, precipitation. and from the upper paddy field, which comprised 13-33% of the total inflow. Although most of the nutrient outflow was attributed to plant uptake. nutrient loss by surface drainage was substantial, comprising 20% for T-N and 10% for T-P. Water and nutrient balances indicate that reduction of surface drainage from paddy rice fields is imperative for nonpoint source pollution control. The simplified computer model, PADDIMOD, was developed to simulate water and nutrient (T-N and T-P) behavior in the paddy rice field. The model predicts daily ponded water depth, surface drainage, and nutrient concentrations. It was formulated with a few equations and simplified assumptions, but its application and a model fitness test indicated that the simulation results reasonably matched the observed data. It is a simple and convenient planning model that could be used to evaluate BMPs of paddy rice fields alone or in combination with other complex watershed models. Application of the PADDIMOD to other paddy rice fields with different agricultural environments might require further calibration and validation.

Dynamical roguing model for controlling the spread of tungro virus via Nephotettix Virescens in a rice field

NASA Astrophysics Data System (ADS)

Blas, Nikki; David, Guido

2017-10-01

Rice tungro disease is described as a cancer due to its major impact on the livelihood of farmers and the difficulty of controlling it. Tungro is a semi-persistent virus transmitted by green leafhoppers called Nephotettix Virescens. In this paper, we presented a compartmental plant-vector model of the Nephotettix Virescens - rice plant interaction based on a system of ordinary differential equations to simulate the effects of roguing in controlling the spread of Tungro virus in a model rice field of susceptible rice variety (Taichung Native 1).

Field-based rice classification in Wuhua county through integration of multi-temporal Sentinel-1A and Landsat-8 OLI data

NASA Astrophysics Data System (ADS)

Yang, Huijin; Pan, Bin; Wu, Wenfu; Tai, Jianhao

2018-07-01

Rice is one of the most important cereals in the world. With the change of agricultural land, it is urgently necessary to update information about rice planting areas. This study aims to map rice planting areas with a field-based approach through the integration of multi-temporal Sentinel-1A and Landsat-8 OLI data in Wuhua County of South China where has many basins and mountains. This paper, using multi-temporal SAR and optical images, proposes a methodology for the identification of rice-planting areas. This methodology mainly consists of SSM applied to time series SAR images for the calculation of a similarity measure, image segmentation process applied to the pan-sharpened optical image for the searching of homogenous objects, and the integration of SAR and optical data for the elimination of some speckles. The study compares the per-pixel approach with the per-field approach and the results show that the highest accuracy (91.38%) based on the field-based approach is 1.18% slightly higher than that based on the pixel-based approach for VH polarization, which is brought by eliminating speckle noise through comparing the rice maps of these two approaches. Therefore, the integration of Sentinel-1A and Landsat-8 OLI images with a field-based approach has great potential for mapping rice or other crops' areas.

Dynamic changes in the rice blast population in the USA over six decades

USDA-ARS?s Scientific Manuscript database

Rice blast disease caused by Magnaporthe oryzae is one of the most destructive diseases of rice. Field isolates of M. oryzae rapidly adapt to the hosts and climate. Tracking the genetic and pathogenic variability of the field isolates is essential to understand how M. oryzae interacts with hosts an...

Long-term cultivation of Bt rice expressing the Cry1Ab/1Ac gene reduced phytoparasitic nematode abundance but did not affect other nematode parameters in paddy fields.

PubMed

Chen, Qunying; Yang, Bing; Liu, Xianghui; Chen, Fajun; Ge, Feng

2017-12-31

The uncertainty of ecological risks and the effects of growing transgenic Bt rice on the environment hamper its commercial production. Here, soil nematode communities were used as an indicator of soil health and soil food web structure to evaluate the potential effects of growing Bt rice without chemical insecticides for 3years in the paddy field. The nematodes and soil physicochemical properties of Bt rice fields were compared to the near-isogenic control, non-Bt rice fields. A total of 108,363 specimens belonging to 28 different genera were enumerated. The Hirschmanniella, Tobrilus, Dorylaimus and Filenchus were dominant genera. A three-year paddy rice cultivation of Bt rice (Huahui 1) negatively affected the abundance of phytoparasitic nematodes but did not affect the total number of nematodes, the abundance and relative abundance of free-living nematodes, genera richness, diversity indices, soil food web conditions, or community compositions. However, apparent seasonal and inter-annual changes in these variables were observed, indicating that the impact of environmental factors was more stronger than that of the Bt toxin. In conclusion, the potential ecological risks of Bt rice on soil health and sustainability warrant further research to disentangle the impacts from various confounding environmental factors. Copyright © 2017 Elsevier B.V. All rights reserved.

No effect of Bt-transgenic rice litter on the meiobenthos community in field ditches.

PubMed

Liu, Yongbo; Jiang, Wanxiang; Liang, Yuyong; Zhao, Caiyun; Li, Junsheng

2017-06-01

The non-target effect of Bacillus thuringiensis (Bt) toxins in aquatic ecosystems is crucial to improve the present assessment of Bt-transgenic plants, particularly where crops are cultivated near aquatic ecosystems. We conducted decomposition experiments during two growing seasons to determine the effects of Bt-transgenic rice litter with and without insecticide application on the meiobenthos communities in a field ditch. The community composition of meiobenthos colonised on leaf litter was not significantly different between Bt and non-Bt rice. The abundance of meiobenthos colonising leaves differed between insecticide application and control, and this insecticide effect interacted with rice type. No Bt toxin was detected in field ditch water. Leaf decomposition and nutrient content were comparable for both Bt and non-Bt rice with or without insecticide application. Bt-transgenic rice litter had no effect on the meiobenthos community composition in field ditches, but the chronic persistence of transgenic litter in nature needs to be taken into account at large scales in aquatic ecosystems. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

Cadmium accumulation in and tolerance of rice (Oryza sativa L.) varieties with different rates of radial oxygen loss.

PubMed

Wang, M Y; Chen, A K; Wong, M H; Qiu, R L; Cheng, H; Ye, Z H

2011-06-01

Cadmium (Cd) uptake and tolerance were investigated among 20 rice cultivars based on a field experiment (1.2 mg Cd kg⁻¹ in soil) and a soil pot trial (control, 100 mg Cd kg⁻¹), and rates of radial oxygen loss (ROL) were measured under a deoxygenated solution. Significant differences were found among the cultivars in: (1) brown rice Cd concentrations (0.11-0.29 mg kg⁻¹) in a field soil, (2) grain Cd tolerance (34-113%) and concentrations (2.1-6.5 mg kg⁻¹) in a pot trial, and (3) rates of ROL (15-31 mmol O₂ kg⁻¹ root d.w. h⁻¹). Target hazard quotients were calculated for the field experiment to assess potential Cd risk. Significant negative relationships were found between rates of ROL and concentrations of Cd in brown rice or straw under field and greenhouse conditions, indicating that rice cultivars with higher rates of ROL had higher capacities for limiting the transfer of Cd to rice and straw. Copyright © 2011 Elsevier Ltd. All rights reserved.

Field trial of GABA-fortified rice plants and oral administration of milled rice in spontaneously hypertensive rats.

PubMed

Kowaka, Emi; Shimajiri, Yasuka; Kawakami, Kouhei; Tongu, Miki; Akama, Kazuhito

2015-06-01

Hypertension is one of the most critical risk factors accompanying cardiovascular diseases. γ-Aminobutyric acid (GABA) is a non-protein amino acid that functions as a major neurotransmitter in mammals and also as a blood-pressure lowering agent. We previously produced GABA-fortified rice lines of a popular Japonica rice cultivar 'Koshihikari' by genetic manipulation of GABA shunt-related genes. In the study reported here, we grew these same novel rice lines in a field trial and administered the milled rice orally to rats. The yield parameters of the transgenic rice plants were almost unchanged compared to those of untransformed cv. 'Koshihikari' plants, while the rice grains of the transgenic plants contained a high GABA content (3.5 g GABA/kg brown rice; 0.75-0.85 GABA g/kg milled rice) in a greenhouse trial. Oral administration of a diet containing 2.5% GABA-fortified rice, with a daily intake for 8 weeks, had an approximately 20 mmHg anti-hypertensive effect in spontaneous hypertensive rats but not in normotensive Wistar-Kyoto rats. These results suggest that GABA-fortified rice may be applicable as a staple food to control or prevent hypertension.

Effect of transgenic Bacillus thuringiensis rice lines on mortality and feeding behavior of rice stem borers (Lepidoptera: Crambidae).

PubMed

Chen, Hao; Zhang, Guoan; Zhang, Qifa; Lin, Yongjun

2008-02-01

Ten transgenic Bacillus thuringiensis Bt rice, Oryza sativa L., lines with different Bt genes (two Cry1Ac lines, three Cry2A lines, and five Cry9C lines) derived from the same variety Minghui 63 were evaluated in both the laboratory and the field. Bioassays were conducted by using the first instars of two main rice lepidopteran insect species: yellow stem borer, Scirpophaga incertulas (Walker) and Asiatic rice borer, Chilo suppressalis (Walker). All transgenic lines exhibited high toxicity to these two rice borers. Field evaluation results also showed that all transgenic lines were highly insect resistant with both natural infestation and manual infestation of the neonate larvae of S. incertulas compared with the nontransformed Minghui63. Bt protein concentrations in leaves of 10 transgenic rice lines were estimated by the sandwich enzyme-linked immunosorbent assay. The cry9C gene had the highest expression level, next was cry2A gene, and the cry1Ac gene expressed at the lowest level. The feeding behavior of 7-d-old Asiatic rice borer to three classes of Bt transgenic rice lines also was detected by using rice culm cuttings. The results showed that 7-d-old larvae of Asiatic rice borer have the capacity to distinguish Bt and non-Bt culm cuttings and preferentially fed on non-Bt cuttings. When only Bt culm cuttings with three classes of different Bt proteins (CrylAc, Cry2A, and Cry9C) were fed, significant distribution difference of 7-d-old Asiatic rice borer in culm cuttings of different Bt proteins also was found. In the current study, we evaluate different Bt genes in the same rice variety in both the laboratory and the field, and also tested feeding behavior of rice insect to these Bt rice. These data are valuable for the further development of two-toxin Bt rice and establishment of appropriate insect resistance management in the future.

Response of Methanogenic Microbial Communities to Desiccation Stress in Flooded and Rain-Fed Paddy Soil from Thailand

PubMed Central

Reim, Andreas; Hernández, Marcela; Klose, Melanie; Chidthaisong, Amnat; Yuttitham, Monthira; Conrad, Ralf

2017-01-01

Rice paddies in central Thailand are flooded either by irrigation (irrigated rice) or by rain (rain-fed rice). The paddy soils and their microbial communities thus experience permanent or arbitrary submergence, respectively. Since methane production depends on anaerobic conditions, we hypothesized that structure and function of the methanogenic microbial communities are different in irrigated and rain-fed paddies and react differently upon desiccation stress. We determined rates and relative proportions of hydrogenotrophic and aceticlastic methanogenesis before and after short-term drying of soil samples from replicate fields. The methanogenic pathway was determined by analyzing concentrations and δ13C of organic carbon and of CH4 and CO2 produced in the presence and absence of methyl fluoride, an inhibitor of aceticlastic methanogenesis. We also determined the abundance (qPCR) of genes and transcripts of bacterial 16S rRNA, archaeal 16S rRNA and methanogenic mcrA (coding for a subunit of the methyl coenzyme M reductase) and the composition of these microbial communities by T-RFLP fingerprinting and/or Illumina deep sequencing. The abundances of genes and transcripts were similar in irrigated and rain-fed paddy soil. They also did not change much upon desiccation and rewetting, except the transcripts of mcrA, which increased by more than two orders of magnitude. In parallel, rates of CH4 production also increased, in rain-fed soil more than in irrigated soil. The contribution of hydrogenotrophic methanogenesis increased in rain-fed soil and became similar to that in irrigated soil. However, the relative microbial community composition on higher taxonomic levels was similar between irrigated and rain-fed soil. On the other hand, desiccation and subsequent anaerobic reincubation resulted in systematic changes in the composition of microbial communities for both Archaea and Bacteria. It is noteworthy that differences in the community composition were mostly detected on the level of operational taxonomic units (OTUs; 97% sequence similarity). The treatments resulted in change of the relative abundance of several archaeal OTUs. Some OTUs of Methanobacterium, Methanosaeta, Methanosarcina, Methanocella and Methanomassiliicoccus increased, while some of Methanolinea and Methanosaeta decreased. Bacterial OTUs within Firmicutes, Cyanobacteria, Planctomycetes and Deltaproteobacteria increased, while OTUs within other proteobacterial classes decreased. PMID:28529503

Arsenic in soil and irrigation water affects arsenic uptake by rice: complementary insights from field and pot studies.

PubMed

Dittmar, Jessica; Voegelin, Andreas; Maurer, Felix; Roberts, Linda C; Hug, Stephan J; Saha, Ganesh C; Ali, M Ashraf; Badruzzaman, A Borhan M; Kretzschmar, Ruben

2010-12-01

Groundwater rich in arsenic (As) is extensively used for dry season boro rice cultivation in Bangladesh, leading to long-term As accumulation in soils. This may result in increasing levels of As in rice straw and grain, and eventually, in decreasing rice yields due to As phytotoxicity. In this study, we investigated the As contents of rice straw and grain over three consecutive harvest seasons (2005-2007) in a paddy field in Munshiganj, Bangladesh, which exhibits a documented gradient in soil As caused by annual irrigation with As-rich groundwater since the early 1990s. The field data revealed that straw and grain As concentrations were elevated in the field and highest near the irrigation water inlet, where As concentrations in both soil and irrigation water were highest. Additionally, a pot experiment with soils and rice seeds from the field site was carried out in which soil and irrigation water As were varied in a full factorial design. The results suggested that both soil As accumulated in previous years and As freshly introduced with irrigation water influence As uptake during rice growth. At similar soil As contents, plants grown in pots exhibited similar grain and straw As contents as plants grown in the field. This suggested that the results from pot experiments performed at higher soil As levels can be used to assess the effect of continuing soil As accumulation on As content and yield of rice. On the basis of a recently published scenario of long-term As accumulation at the study site, we estimate that, under unchanged irrigation practice, average grain As concentrations will increase from currently ∼0.15 mg As kg(-1) to 0.25-0.58 mg As kg(-1) by the year 2050. This translates to a 1.5-3.8 times higher As intake by the local population via rice, possibly exceeding the provisional tolerable As intake value defined by FAO/WHO.

Metaproteomic identification of diazotrophic methanotrophs and their localization in root tissues of field-grown rice plants.

PubMed

Bao, Zhihua; Okubo, Takashi; Kubota, Kengo; Kasahara, Yasuhiro; Tsurumaru, Hirohito; Anda, Mizue; Ikeda, Seishi; Minamisawa, Kiwamu

2014-08-01

In a previous study by our group, CH4 oxidation and N2 fixation were simultaneously activated in the roots of wild-type rice plants in a paddy field with no N input; both processes are likely controlled by a rice gene for microbial symbiosis. The present study examined which microorganisms in rice roots were responsible for CH4 oxidation and N2 fixation under the field conditions. Metaproteomic analysis of root-associated bacteria from field-grown rice (Oryza sativa Nipponbare) revealed that nitrogenase complex-containing nitrogenase reductase (NifH) and the alpha subunit (NifD) and beta subunit (NifK) of dinitrogenase were mainly derived from type II methanotrophic bacteria of the family Methylocystaceae, including Methylosinus spp. Minor nitrogenase proteins such as Methylocella, Bradyrhizobium, Rhodopseudomonas, and Anaeromyxobacter were also detected. Methane monooxygenase proteins (PmoCBA and MmoXYZCBG) were detected in the same bacterial group of the Methylocystaceae. Because these results indicated that Methylocystaceae members mediate both CH4 oxidation and N2 fixation, we examined their localization in rice tissues by using catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH). The methanotrophs were localized around the epidermal cells and vascular cylinder in the root tissues of the field-grown rice plants. Our metaproteomics and CARD-FISH results suggest that CH4 oxidation and N2 fixation are performed mainly by type II methanotrophs of the Methylocystaceae, including Methylosinus spp., inhabiting the vascular bundles and epidermal cells of rice roots. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

Spatial Analysis of Rice Blast in China at Three Different Scales.

PubMed

Guo, Fangfang; Chen, Xinglong; Lu, Minghong; Yang, Li; Wang, Shi Wei; Wu, Bo Ming

2018-05-22

In this study, spatial analyses were conducted at three different scales to better understand the epidemiology of rice blast, a major rice disease caused by Magnaporthe oryzae. At regional scale, across the major rice production regions in China, rice blast incidence was monitored on 101 dates at 193 stations from June 10 th to Sep. 10 th during 2009-2014, and surveyed in 143 fields in September, 2016; at county scale, 3 surveys were done covering 1-5 counties in 2015-2016; and at field scale, blast was evaluated in 6 fields in 2015-2016. Spatial cluster and hot spot analyses were conducted in GIS on the geographical pattern of the disease at regional scale, and geostatistical analysis performed at all the three scales. Cluster and hot spot analyses revealed that high-disease areas were clustered in mountainous areas in China. Geostatistical analyses detected spatial dependence of blast incidence with influence ranges of 399 to 1080 km at regional scale, and 5 to 10 m at field scale, but not at county scale. The spatial patterns at different scales might be determined by inherent properties of rice blast and environmental driving forces, and findings from this study provide helpful information to sampling and management of rice blast.

Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice

USDA-ARS?s Scientific Manuscript database

Weedy rice is a significant problem in cultivated rice fields throughout the world, and is an emerging threat in regions where it was previously absent. Prior research has classified weedy rice as the same species as Asian cultivated rice (Oryza sativa L.). This close genetic relationship makes cont...

Understanding of evolutionary genomics of invasive species of rice

USDA-ARS?s Scientific Manuscript database

Red rice is an aggressive, weedy form of cultivated rice (Oryza sativa) that infests crop fields and is a primary factor limiting rice productivity in the U.S. and worldwide. As the weedy relative of a genomic model species, red rice is a model for understanding the genetic and evolutionary mechani...

Bioavailability to grains of rice of aged and fresh DDD and DDE in soils.

PubMed

Yao, Fenxia; Yu, Guifen; Bian, Yongrong; Yang, Xinglun; Wang, Fang; Jiang, Xin

2007-05-01

DDT had been widely used around the world before 1980s and is still under production and use for non-agricultural purposes in China. Because of their special physicochemical properties, p,p'-DDT and its main metabolites, p,p'-DDD and p,p'-DDE, accumulated and persisted in the environment, presenting potential menace on biota. A green-house study was conducted to determine the bioavailability of p,p'-DDD and p,p'-DDE to grains of rice and the influences of traditional Chinese farming practices on their bioaccumulation. Paddy rice and dry rice were grown in submerged paddy soils and non-submerged upland soils, respectively. Two types of soil, Hydragric Anthrosols (An) and Hydragric Acrisols (Ac), were employed. Bioaccumulation factors (BAFs) of DDE ranged from 0.67 for rice grown in non-submerged An to 0.84 in submerged An in the control group, whilst BAFs were all below 0.04 in experimental groups. BAFs of DDD varied from 1.39 for submerged An to 2.26 for submerged Ac in original soils. In contrast, BAFs were between 0.05 for non-submerged Ac and 0.08 for submerged An in DDD-contaminated soils. Flooding seemed to have two contradictory effects on the DDE/DDD accumulation by rice: on one hand, it made the pollutants more mobile and bioavailable; while on the other hand, it enhanced the degradation and binding of POPs. Adding rice straw to the soils protected DDE from being taken up yet promoted DDD accumulation by rice. Furthermore, the distinct inorganic component of the soils might also play an important role in the environmental activities of POPs.

Organ-specific analysis of the anaerobic primary metabolism in rice and wheat seedlings. I: Dark ethanol production is dominated by the shoots.

PubMed

Mustroph, Angelika; Boamfa, Elena I; Laarhoven, Lucas J J; Harren, Frans J M; Albrecht, Gerd; Grimm, Bernhard

2006-12-01

During anaerobiosis in darkness the main route for ATP production in plants is through glycolysis in combination with fermentation. We compared the organ-specific anaerobic fermentation of flooding-tolerant rice (Oryza sativa) and sensitive wheat (Triticum aestivum) seedlings. A sensitive laser-based photoacoustic trace gas detection system was used to monitor emission of ethanol and acetaldehyde by roots and shoots of intact seedlings. Dark-incubated rice seedlings released 3 times more acetaldehyde and 14 times more ethanol than wheat seedlings during anaerobiosis. Ninety percent of acetaldehyde originated from shoots of both species. In comparison to wheat shoots, the high ethanol production of rice shoots correlated with larger amounts of soluble carbohydrates, and higher activities of fermentative enzymes. After 24 h of anaerobiosis in darkness rice shoots still contained 30% of aerated ATP level, which enabled seedlings to survive this period. In contrast, ATP content declined almost to zero in wheat shoots and roots, which were irreversibly damaged after a 24-h anaerobic period. When plants were anaerobically and dark incubated for 4 h and subsequently transferred back to aeration, shoots showed a transient peak of acetaldehyde release indicating prompt re-oxidation of ethanol. Post-anoxic acetaldehyde production was lower in rice seedlings than in wheat. This observation accounts for a more effective acetaldehyde detoxification system in rice. Compared to wheat the greater tolerance of rice seedlings to transient anaerobic periods is explained by a faster fermentation rate of their shoots allowing a sufficient ATP production and an efficient suppression of toxic acetaldehyde formation in the early re-aeration period.

The Infectious and Noninfectious Dermatological Consequences of Flooding: A Field Manual for the Responding Provider.

PubMed

Bandino, Justin P; Hang, Anna; Norton, Scott A

2015-10-01

Meteorological data show that disastrous floods are increasingly frequent and more severe in recent years, perhaps due to climatic changes such as global warming. During and after a flood disaster, traumatic injuries, communicable diseases, chemical exposures, malnutrition, decreased access to care, and even mental health disorders dramatically increase, and many of these have dermatological manifestations. Numerous case reports document typical and atypical cutaneous infections, percutaneous trauma, immersion injuries, noninfectious contact exposures, exposure to wildlife, and exacerbation of underlying skin diseases after such disasters as the 2004 Asian tsunami, Hurricane Katrina in 2005, and the 2010 Pakistan floods. This review attempts to provide a basic field manual of sorts to providers who are engaged in care after a flooding event, with particular focus on the infectious consequences. Bacterial pathogens such as Staphylococcus and Streptococcus are still common causes of skin infections after floods, with atypical bacteria also greatly increased. Vibrio vulnificus is classically associated with exposure to saltwater or brackish water. It may present as necrotizing fasciitis with hemorrhagic bullae, and treatment consists of doxycycline or a quinolone, plus a third-generation cephalosporin and surgical debridement. Atypical mycobacterial infections typically produce indolent cutaneous infections, possibly showing sporotrichoid spread. A unique nontuberculous infection called spam has recently been identified in Satowan Pacific Islanders; combination antibiotic therapy is recommended. Aeromonas infection is typically associated with freshwater exposure and, like Vibrio infections, immunocompromised or cirrhotic patients are at highest risk for severe disease, such as necrotizing fasciitis and sepsis. Various antibiotics can be used to treat Aeromonas infections. Melioidosis is seen mainly in Southeast Asia and Australia, particularly in rice farmers, and can remain latent for many years before presenting as the host's immunocompetence wanes. It can present with a variety of skin findings or as a nonspecific febrile illness, and preferred treatment consists of ceftazidime or a carbapenem with trimethoprim/sulfamethoxazole (TMP/SMX) for 2 weeks, then continuing TMP/SMX for at least 3 months. Leptospirosis is a waterborne zoonosis that is often prevalent after heavy rains or flooding. Different forms exist, including Fort Bragg fever, which produces a distinctive erythematous papular rash on the shins. Doxycycline is often sufficient; however, volume and potassium repletion may be necessary if renal involvement exists. Chromobacterium violaceum infection may occur after open skin is exposed to stagnant or muddy water. Cultured colonies produce a unique violacein pigment, and treatment typically consists of a carbapenem. Both typical and atypical fungal infections are increased in the flooding disaster scenario, such as dermatophytosis, chromoblastomycosis, blastomycosis, and mucormycosis. Appropriate antifungals should be used. In addition, land inundated with water expands the habitat for parasites and/or vectors, thus increased vigilance for regional parasitic infections is necessary after a flood. Lastly, noninfectious consequences of a flooding disaster are also common and include miliaria, immersion foot syndromes, irritant and allergic contact dermatitis, traumatic wounds and animal bites, and arthropod assault, as well as exacerbation of existing skin conditions such as atopic dermatitis, psoriasis, and alopecia areata due to increased stress or nonavailability of daily medications.

Species diversity of ostracods (Crustacea: Ostracoda) from rice fields in Northeast Thailand, with the description of a new Tanycypris species.

PubMed

Savatenalinton, Sukonthip

2017-12-07

The species diversity of ostracods in rice fields from Northeast Thailand was studied. Fifty-two samples were collected from 43 rice fields during 2010-2016. This investigation revealed 23 genera and 52 species, including one new to science (Tanycypris eugenkempfi n. sp.) and 21 endemic species: endemic to the Oriental region (14 species), Southeast Asia (two species) and Thailand (five species). In addition, two species that were restricted to rice fields in this study were recognized: Bradleytriebella tuberculata (Hartmann, 1964) and Notodromas sinensis Neale & Zhao, 1991. The most diverse genus was Pseudostrandesia, followed by Strandesia with eight and five species, respectively. The most widely distributed species were Pseudocypretta maculata Klie, 1932 and Strandesia kraepelini (G.W. Müller, 1906) occurring in 48.8 % of the total of surveyed rice fields. The number of species in individual rice fields ranged from none to 18. Most of the samples contained three species, but one rice field showed very high species richness (18 species). Most of the species recorded in this study were also found in several types of water bodies and reported from several zoogeographical regions. The main distinguishing characters between Tanycypris eugenkempfi n. sp. and other Tanycypris species are the more tumid carapace in dorsal view, the distinctly arched dorsal margin of the carapace in lateral view, the presence of a subapical dorsal seta on the first segment of the first antenna, the smooth large bristles on the third endite of the maxillula, the absence of c-seta on the first thoracopod, and the long proximal claw (Gp) of the caudal ramus.

Methylmercury dynamics in Upper Sacramento Valley rice fields with low background soil mercury levels

USGS Publications Warehouse

Tanner, K. Christy; Windham-Myers, Lisamarie; Marvin-DiPasquale, Mark C.; Fleck, Jacob; Tate, Kenneth W.; Linquist, Bruce A.

2018-01-01

Few studies have considered how methylmercury (MeHg, a toxic form of Hg produced in anaerobic soils) production in rice (Oryza sativa L.) fields can affect water quality, and little is known about MeHg dynamics in rice fields. Surface water MeHg and total Hg (THg) imports, exports, and storage were studied in two commercial rice fields in the Sacramento Valley, California, where soil THg was low (25 and 57 ng g−1). The median concentration of MeHg in drainage water exiting the fields was 0.17 ng g−1 (range: <0.007–2.1 ng g−1). Compared with irrigation water, drainage water had similar MeHg concentrations, and lower THg concentrations during the growing season. Significantly elevated drainage water MeHg and THg concentrations were observed in the fallow season compared with the growing season. An analysis of surface water loads indicates that fields were net importers of both MeHg (76–110 ng m−2) and THg (1947–7224 ng m−2) during the growing season, and net exporters of MeHg (35–200 ng m−2) and THg (248–6496 ng m−2) during the fallow season. At harvest, 190 to 700 ng MeHg m−2 and 1400 to 1700 ng THg m−2 were removed from fields in rice grain. Rice straw, which contained 120 to 180 ng MeHg m−2 and 7000–10,500 ng m−2 THg was incorporated into the soil. These results indicate that efforts to reduce MeHg and THg exports in rice drainage water should focus on the fallow season. Substantial amounts of MeHg and THg were stored in plants, and these pools should be considered in future studies.

Toxicity evaluation of natural samples from the vicinity of rice fields using two trophic levels.

PubMed

Marques, Catarina R; Pereira, Ruth; Gonçalves, Fernando

2011-09-01

An ecotoxicological screening of environmental samples collected in the vicinity of rice fields followed a combination of physical and chemical measurements and chronic bioassays with two freshwater trophic levels (microalgae: Pseudokirchneriella subcapitata and Chlorella vulgaris; daphnids: Daphnia longispina and Daphnia magna). As so, water and sediment/soil elutriate samples were obtained from three sites: (1) in a canal reach crossing a protected wetland upstream, (2) in a canal reach surrounded by rice fields and (3) in a rice paddy. The sampling was performed before and during the rice culture. During the rice cropping, the whole system quality decreased comparatively to the situation before that period (e.g. nutrient overload, the presence of pesticides in elutriates from sites L2 and L3). This was reinforced by a significant inhibition of both microalgae growth, especially under elutriates. Contrary, the life-history traits of daphnids were significantly stimulated with increasing concentrations of water and elutriates, for both sampling periods.

[Effects of land-use conversion from double rice cropping to vegetables on CO2 and CH4 fluxes in southern China].

PubMed

Yuan, Ye; Liu, Chang-hong; Dai, Xiao-qin; Wang, Hui-min

2015-01-01

In this study, the CO2 and CH4 fluxes in the first year after land use conversion from paddy rice to vegetables were measured by static opaque chamber and gas-chromatograph (GC) method to investigate the land conversion effects on soil CO2 and CH4 emissions. Our results showed that the differences in CO2 fluxes depended on the vegetable types, growing status and seasons. The CO2 flux from the vegetable field was greater than that from the paddy rice field when cowpea was planted, but was lower when pepper was planted. The CH4 flux significantly decreased from 6.96 mg C . m-2 . h-1 to -0.004 mg C . m-2 . h-1 with the land use conversion from rice to vegetables.The net carbon absorption ( CO2 + CH4) of the vegetable fields was 543 kg C . hm-2, significantly lower than that (3641 kg C . hm-2) of the rice paddies. However, no significant difference was found in their global warming impact. In addition, soil carbon content increased in vegetable fields compared to the paddy rice fields after a year of conversion, especially in the 10-20 cm soil layer.

An Inclusive Investigation on Conceivable Performance of Rice Straw Incinerated Electricity Generation

NASA Astrophysics Data System (ADS)

Bhattacharjee, Subhadeep; Mohanta, Subhajit

2018-06-01

Biomass energy is one of the potential renewable energy sources which occupy 77% of the available natural resources of the world. In India, agro residues constitute a major part of the total annual production of the biomass resource. Rice is the major crop in India that leaves substantial quantity of straw in the field. 34% of rice straw residue produced in the country is surplus and is either left in the field as uncollected or to a large extent open-field burnt. Thus, the unutilized rice straw is found promising for heat and power generation either through incineration (direct combustion) or thermo chemical conversion. This present work envisages the comprehensive performative evaluation of a rice straw supported biomass incineration power plant mainly through plant performance characterization, plant economics, and co-firing issues with emission analysis.

An Inclusive Investigation on Conceivable Performance of Rice Straw Incinerated Electricity Generation

NASA Astrophysics Data System (ADS)

Bhattacharjee, Subhadeep; Mohanta, Subhajit

2018-03-01

Biomass energy is one of the potential renewable energy sources which occupy 77% of the available natural resources of the world. In India, agro residues constitute a major part of the total annual production of the biomass resource. Rice is the major crop in India that leaves substantial quantity of straw in the field. 34% of rice straw residue produced in the country is surplus and is either left in the field as uncollected or to a large extent open-field burnt. Thus, the unutilized rice straw is found promising for heat and power generation either through incineration (direct combustion) or thermo chemical conversion. This present work envisages the comprehensive performative evaluation of a rice straw supported biomass incineration power plant mainly through plant performance characterization, plant economics, and co-firing issues with emission analysis.

Establishment of a rice-duck integrated farming system and its effects on soil fertility and rice disease control

NASA Astrophysics Data System (ADS)

Teng, Qing; Hu, Xue-Feng; Cheng, Chang; Luo, Zhi-Qing; Luo, Fan

2015-04-01

Rice-duck integrated farming is an ecological farming system newly established in some areas of southern China . It was reported that the ducks walking around the paddy fields is beneficial to control weed hazards and reduce rice pests and diseases. To study and evaluate the effects of the rice-duck integrated farming on soil fertility and rice disease control, a field experiment of rice cultivation was carried out in the suburb of Shanghai in 2014. It includes a treatment of raising ducks in the fields and a control without ducks. The treatment was implemented by building a duck coop nearby the experimental fields and driving 15 ducks into a plot at daytime since the early stage of rice growth. Each plot is 667 m2 in area. The treatment and control were replicated for three times. No any herbicides, pesticides, fungicides and chemical fertilizers were applied during the experiment to prevent any disturbance to duck growing and rice weed hazards and disease incidences from agrochemicals. The results are as follows: (1) The incidences of rice leaf rollers (Cnaphalocrocis medinalis) and stem borers treated with ducks, 0.45%and 1.18% on average, respectively, are lower than those of the control, 0.74% and 1.44% on average, respectively. At the late stage of rice growth, the incidence of rice sheath blight treated with ducks, 13.15% on average, is significantly lower than that of the control, 16.9% on average; and the incidence of rice planthoppers treated with ducks, 11.3 per hill on average, is also significantly lower than that of the control, 47.4 per hill on average. (2) The number of weeds in the plots treated with ducks, 8.3 per m2 on average, is significantly lower than that of the control, 87.5 m2 on average. (3) Raising ducks in the fields could also enhance soil enzyme activity and nutrient status. At the late stage of rice growth, the activities of urease, phosphatase, sucrase and catalase in the soils treated with ducks are 1.39 times, 1.40 times, 1.29 times and 1.13 times those of the control, respectively; and the content of available P and alkali-hydrolyzable N in the soils treated with ducks, 23.35 mg kg-1 and 107.33 mg kg-1, on average, respectively, are significantly higher than those of the control, 15.70 mg kg-1 and 84.00 mg kg-1 on average, respectively. (4) The grain yield of the plots treated with ducks, 6456.25 kg hm-2 on average, is significantly higher than that of the control, 3403.81 kg hm-2. In short, raising ducks in the paddy fields not only shows a potential of controlling weed hazards and reducing rice pests and diseases, but also effectively improves soil fertility and rice grain yield. Such rice-duck integrated farming will highly contribute to establishing an organic or low-input farming system in southern China in the future.

No-tillage effects on grain yield, N use efficiency, and nutrient runoff losses in paddy fields.

PubMed

Liang, Xinqiang; Zhang, Huifang; He, Miaomiao; Yuan, Junli; Xu, Lixian; Tian, Guangming

2016-11-01

The effect of no-tillage (NT) on rice yield and nitrogen (N) behavior often varies considerably from individual studies. A meta-analysis was performed to assess quantitatively the effect of NT on rice yield and N uptake by rice, N use efficiency (NUE, i.e., fertilizer N recovery efficiency), and nutrient runoff losses. We obtained data from 74 rice-field experiments reported during the last three decades (1983-2013). Results showed the NT system brought a reduction of 3.8 % in the rice yield compared with conventional tillage (CT). Soil pH of 6.5-7.5 was favorable for the improvement of rice yield with the NT system, while a significant negative NT effect on rice yield was observed in sandy soils (p < 0.05). N rate, ranging from 120 to 180 kg N ha -1 , for at least 3 years was necessary for NT to enable rice yield comparable with that of CT. Furthermore, the observations indicated NT reduced N uptake and NUE of the rice by 5.4 and 16.9 %, while increased the N and P exports via runoff by 15.4 and 40.1 % compared with CT, respectively. Seedling cast transplantation, N rate within the range 120-180 kg N ha -1 , and employing NT for longer than 3 years should be encouraged to compromise between productivity and environmental effects of NT implementation in rice fields.

Impact of land reclamation and agricultural water regime on the distribution and conservation status of the endangered Dryophytes suweonensis

PubMed Central

Kim, Kyungmin; Heo, Kyongman

2017-01-01

Knowledge about the distribution and habitat preferences of a species is critical for its conservation. The Suweon Treefrog (Dryophytes suweonensis) is an endangered species endemic to the Republic of Korea. We conducted surveys from 2014 to 2016 at 890 potentially suitable sites across the entire range of the species in South Korea. We then assessed whether D. suweonensis was found in the current and ancestral predicted ranges, reclaimed and protected areas, and how the presence of agricultural floodwater affected its occurrence. Our results describe a 120 km increase in the southernmost known distribution of the species, and the absence of the species at lower latitudes. We then demonstrate a putative constriction on the species ancestral range due to urban encroachment, and provide evidence for a significant increase in its coastal range due to the colonisation of reclaimed land by the species. In addition, we demonstrate that D. suweonensis is present in rice fields that are flooded with water originating from rivers as opposed to being present in rice fields that are irrigated from underground water. Finally, the non-overlap of protected areas and the occurrence of the species shows that only the edge of a single site where D. suweonensis occurs is legally protected. Based on our results and the literature, we suggest the design of a site fitting all the ecological requirements of the species, and suggest the use of such sites to prevent further erosion in the range of D. suweonensis. PMID:29018610

The influence of continuous rice cultivation and different waterlogging periods on morphology, clay mineralogy, Eh, pH and K in paddy soils.

PubMed

Bahmanyar, M A

2007-09-01

The effect of different rice cultivation periods on the properties of selected soils in alluvial plain were studied in Mazandaran province (north of Iran) in 2004. Soils were sampled form 0, 6, 16, 26 and over 40 years rice cultivation fields. In each treatment three soil profiles and six nearby auger holes were studied. The present study results indicated that continuous rice cultivation have changed soil moisture regime from xeric to aquic, soil color from brown to grayish, surface horizons from mollic to ochric epipedon and soil structure changed from granular or blocky to massive. Therefore, the soil order has changed from Mollisols to Inceptisols. No illuviation and eluviation of clay minerals occurred as a consequence of rice cultivation. X-ray diffraction analysis showed that clay minerals in non-rice cultivated field were illite, vermiculite, montmorillonite, kaolinite and chlorite, but in rice field were illite, montmorillonite, kaolinite and chlorite, respectively. In contrast of montmorillonite, the amount of illite and vermiculite have been decreased by increasing periods of rice cultivation. The pH values of the saturated soil surface in six weeks past plantation have shifted toward neutrality. While Eh value of non-paddy soils were about +90 mv, surface horizons of paddy soils at field conditions had Eh value about +40, -12, -84, -122 mv, respectively. The amounts of organic matter and available Fe, Mn, Zn and Cu were increased whereas available K was decreased in paddy soils.

All roads lead to weediness: patterns of genomic divergence reveal extensive recurrent weedy rice origins from South Asian Oryza

USDA-ARS?s Scientific Manuscript database

Weedy rice (Oryza spp.), a weedy relative of cultivated rice (O. sativa), invades and persists in cultivated rice fields worldwide. Many weedy rice populations have evolved similar adaptive traits, considered part of the “agricultural weed syndrome,” making this an ideal model to study the genetic b...

Little white lies: pericarp color provides insights into the origins and evolution of Southeast Asian weedy rice

USDA-ARS?s Scientific Manuscript database

Weedy rice is a conspecific form of cultivated rice (Oryza sativa L.) that infests rice fields and results in severe crop losses. Weed strains in different world regions appear to have originated multiple times from different domesticated and/or wild rice progenitors. In the case of Malaysian weedy ...

Variation in tolerance of rice to long-term stagnant flooding that submerges most of the shoot will aid in breeding tolerant cultivars

PubMed Central

Vergara, Georgina V.; Nugraha, Yudhistira; Esguerra, Manuel Q.; Mackill, David J.; Ismail, Abdelbagi M.

2014-01-01

Stagnant flooding (SF) is a major problem in rainfed lowlands where floodwater of 25–50 cm stagnates in the field for most of the season. We aimed to establish a system for phenotyping SF tolerance and identifying tolerant germplasm through screening of landraces. A total of 626 rice accessions were evaluated over 3 years under control conditions and two levels of SF. Floodwater was raised to 20 cm at 25 or 30 days after transplanting (DAT). In one trial, the depth was increased subsequently by 5 cm a week and in another (severe stress), it was increased to 40 cm at 37 DAT and to 50 cm at 42 DAT. In both trials, water depth was maintained at 50–60 cm until maturity. In all cases, no plant was completely submerged. Plant height, elongation rate and yield were measured at maturity. Genotypes best suited to SF showed moderate elongation of 1.3–2.3 cm day−1 under SF. In contrast, semi-dwarf and fast-elongating types performed poorly. Subsequent trials using 18 genotypes, including six pairs of near isogenic lines (NILs) with or without SUB1 showed that all SUB1 NILs were sensitive to SF. Five of the other six genotypes contained SUB1 and were SF tolerant, suggesting the possibility of combining tolerances to complete submergence (SUB1) and SF. Stem starch and soluble sugar concentrations were similar under control conditions among the 18 genotypes, but starch was depleted by 37 % under SF, with less depletion in tolerant genotypes. SUB1 NILs contained similar concentrations of starch and sugars under SF. We conclude that survival and yield under SF are dependent on moderate elongation, high tillering, lesser carbohydrate depletion and higher fertility. The tolerant genotypes identified here performed strongly in both wet and dry seasons and will be used to identify tolerance mechanisms and alleles for use in marker-assisted breeding. PMID:25202124

Belowground Inoculation With Arbuscular Mycorrhizal Fungi Increases Local and Systemic Susceptibility of Rice Plants to Different Pest Organisms

PubMed Central

Bernaola, Lina; Cosme, Marco; Schneider, Raymond W.; Stout, Michael

2018-01-01

Plants face numerous challenges from both aboveground and belowground stressors, and defend themselves against harmful insects and microorganisms in many ways. Because plant responses to biotic stresses are not only local but also systemic, belowground interactions can influence aboveground interactions in both natural and agricultural ecosystems. Arbuscular mycorrhizal fungi (AMF) are soilborne organisms that form symbiotic associations with many plant roots and are thought to play a central role in plant nutrition, growth, and fitness. In the present study, we focused on the influence of AMF on rice defense against pests. We inoculated rice plants with AMF in several field and greenhouse experiments to test whether the interaction of AMF with rice roots changes the resistance of rice against two chewing insects, the rice water weevil (Lissorhoptrus oryzophilus Kuschel, RWW) and the fall armyworm (Spodoptera frugiperda, FAW), and against infection by sheath blight (Rhizoctonia solani, ShB). Both in field and greenhouse experiments, the performance of insects and the pathogen on rice was enhanced when plants were inoculated with AMF. In the field, inoculating rice plants with AMF resulted in higher numbers of RWW larvae on rice roots. In the greenhouse, more RWW first instars emerged from AMF-colonized rice plants than from non-colonized control plants. Weight gains of FAW larvae were higher on rice plants treated with AMF inoculum. Lesion lengths and susceptibility to ShB infection were higher in rice plants colonized by AMF. Although AMF inoculation enhanced the growth of rice plants, the nutritional analyses of root and shoot tissues indicated no major increases in the concentrations of nutrients in rice plants colonized by AMF. The large effects on rice susceptibility to pests in the absence of large effects on plant nutrition suggest that AMF colonization influences other mechanisms of susceptibility (e.g., defense signaling processes). This study represents the first study conducted in the U.S. in rice showing AMF-induced plant susceptibility to several antagonists that specialize on different plant tissues. Given the widespread occurrence of AMF, our findings will help to provide a different perspective into the causal basis of rice systemic resistance/susceptibility to insects and pathogens. PMID:29922319

Belowground Inoculation With Arbuscular Mycorrhizal Fungi Increases Local and Systemic Susceptibility of Rice Plants to Different Pest Organisms.

PubMed

Bernaola, Lina; Cosme, Marco; Schneider, Raymond W; Stout, Michael

2018-01-01

Plants face numerous challenges from both aboveground and belowground stressors, and defend themselves against harmful insects and microorganisms in many ways. Because plant responses to biotic stresses are not only local but also systemic, belowground interactions can influence aboveground interactions in both natural and agricultural ecosystems. Arbuscular mycorrhizal fungi (AMF) are soilborne organisms that form symbiotic associations with many plant roots and are thought to play a central role in plant nutrition, growth, and fitness. In the present study, we focused on the influence of AMF on rice defense against pests. We inoculated rice plants with AMF in several field and greenhouse experiments to test whether the interaction of AMF with rice roots changes the resistance of rice against two chewing insects, the rice water weevil ( Lissorhoptrus oryzophilus Kuschel, RWW) and the fall armyworm ( Spodoptera frugiperda , FAW), and against infection by sheath blight ( Rhizoctonia solani , ShB). Both in field and greenhouse experiments, the performance of insects and the pathogen on rice was enhanced when plants were inoculated with AMF. In the field, inoculating rice plants with AMF resulted in higher numbers of RWW larvae on rice roots. In the greenhouse, more RWW first instars emerged from AMF-colonized rice plants than from non-colonized control plants. Weight gains of FAW larvae were higher on rice plants treated with AMF inoculum. Lesion lengths and susceptibility to ShB infection were higher in rice plants colonized by AMF. Although AMF inoculation enhanced the growth of rice plants, the nutritional analyses of root and shoot tissues indicated no major increases in the concentrations of nutrients in rice plants colonized by AMF. The large effects on rice susceptibility to pests in the absence of large effects on plant nutrition suggest that AMF colonization influences other mechanisms of susceptibility (e.g., defense signaling processes). This study represents the first study conducted in the U.S. in rice showing AMF-induced plant susceptibility to several antagonists that specialize on different plant tissues. Given the widespread occurrence of AMF, our findings will help to provide a different perspective into the causal basis of rice systemic resistance/susceptibility to insects and pathogens.

Simulating water and nitrogen loss from an irrigated paddy field under continuously flooded condition with Hydrus-1D model.

PubMed

Yang, Rui; Tong, Juxiu; Hu, Bill X; Li, Jiayun; Wei, Wenshuo

2017-06-01

Agricultural non-point source pollution is a major factor in surface water and groundwater pollution, especially for nitrogen (N) pollution. In this paper, an experiment was conducted in a direct-seeded paddy field under traditional continuously flooded irrigation (CFI). The water movement and N transport and transformation were simulated via the Hydrus-1D model, and the model was calibrated using field measurements. The model had a total water balance error of 0.236 cm and a relative error (error/input total water) of 0.23%. For the solute transport model, the N balance error and relative error (error/input total N) were 0.36 kg ha -1 and 0.40%, respectively. The study results indicate that the plow pan plays a crucial role in vertical water movement in paddy fields. Water flow was mainly lost through surface runoff and underground drainage, with proportions to total input water of 32.33 and 42.58%, respectively. The water productivity in the study was 0.36 kg m -3 . The simulated N concentration results revealed that ammonia was the main form in rice uptake (95% of total N uptake), and its concentration was much larger than for nitrate under CFI. Denitrification and volatilization were the main losses, with proportions to total consumption of 23.18 and 14.49%, respectively. Leaching (10.28%) and surface runoff loss (2.05%) were the main losses of N pushed out of the system by water. Hydrus-1D simulation was an effective method to predict water flow and N concentrations in the three different forms. The study provides results that could be used to guide water and fertilization management and field results for numerical studies of water flow and N transport and transformation in the future.

Growth and Survival of Baldcypress Planted in an Old Rice Field of Coastal South Carolina

Treesearch

William H. Conner; L. Wayne Inabinette; Mehmet Ozalp

2004-01-01

Vast acreages of baldcypress [Taxodium distichum (L.) Rich.] swampland in coastal South Carolina were cleared for rice production starting in the late 1600s. When rice cultivation ended in the late 1800s, many cultivated areas became marshlands. Other fields failed to return to forest unless they were planted. In one such area, nine acres were...

Seasonal variation in measured H2O and CO2 flux of irrigated rice in the Mid-South

USDA-ARS?s Scientific Manuscript database

Rice production in the Lower Mississippi River Basin constitutes over half of US rice production, but little research has been done on water and carbon flux in this region at the field scale. Eddy covariance measurements of water and CO2 flux allow for an integrated field measurement of the interac...

Marker traits association of agronomical traits correlated with stagnant flooding tolerance in rice

NASA Astrophysics Data System (ADS)

Sitaresmi, T.; Utami, D. W.; Suwarno, W. B.; Ardie, S. W.; Susanto, U.; Aswidinnoor, H.

2017-05-01

In deep-water areas, the water depth increases gradually throughout the year and maintains up to more than 50 cm of deep of water for long period. In these situations, elongation ability is necessary to allow the plants to keep up with rising floodwater. The elongation of internode during submergence is regulated by environmental and hormonal factors. The objective of this study was aimed to identify the SNP markers on 384 SNPs linked with agronomical and morphological traits related to stagnant flooding tolerance. The research were conducted at Indonesian Center for Rice Research and Indonesian Centre for Agricultural Biotechnology and Genetic Resources Research and Development. The phenotypical data was collected from F2 from bi-parental crossing of IR 42 and IRRI 119. IR 42 was sensitive parent, and IRRI 119 was tolerant. DNA extraction for rice was using a modified version of Murray and Thompson method using cetyl tri-methyl-ammonium bromide (CTAB). The genotyping was carried out using 384 SNPs Golden Gate Illumina assay. Association analysis between SNP markers and phenotypical data was performed using General Linear Model in Tassel versus 5.0 software program. Based on GLM analysis, the significant marker for plant height with P value < 0.05 are TBGI275345, TBGI275367, and TBGI424383. The significant marker for number of tiller are TBGI000722, TBGI258600, TBGI270843, TBGI271066, TBGI271076, TBGI272122, TBGI272241, and TBGI327790. Two of them, TBGI424383 and TBGI271066 were expected associated with family of protein kinase which play role in plant stress signalling.

Partitioning of arsenic in soil-crop systems irrigated using groundwater: a case study of rice paddy soils in southwestern Taiwan.

PubMed

Hsu, Wen-Ming; Hsi, Hsing-Cheng; Huang, You-Tuan; Liao, Chien-Sen; Hseu, Zeng-Yei

2012-02-01

The accumulation of As in rice due to groundwater irrigation in paddy fields represents a serious health hazard in South and Southeast Asia. In Taiwan, the fate of As in long-term irrigated paddy fields is poorly understood. Groundwater, surface soil, and rice samples were collected from a paddy field that was irrigated with As-containing groundwater in southwestern Taiwan. The purpose of this study is to elucidate the source and sink of As in the paddy field by comparing the As fractions in the soils that were obtained by a sequential extraction procedure (SEP) with the As uptake of rice. The risks associated with eating rice from the field can thus be better understood. The concentration of As in groundwater varied with time throughout the growing seasons of rice, but always exceeded the permitted maximum (10 μg L(-1)) for drinking water by the WHO. The As concentration increased with the concentration of Fe in the groundwater, supporting the claim that a large amount of As was concentrated in the Fe flocs collected from the internal wall of the groundwater pump. The results of the SEP revealed that As bound with amorphous and crystalline hydrous oxides exhibited high availability in the soils. The root of rice accumulated the largest amount of As, followed by the straw, husk, and grain. Although the As concentration in the rice grain was less than 1.0 mg kg(-1), the estimated intake level was close to the maximum tolerable daily intake of As, as specified by the WHO. Copyright © 2011 Elsevier Ltd. All rights reserved.

Improved stress tolerance and productivity in transgenic rice plants constitutively expressing the Oryza sativa glutathione synthetase OsGS under paddy field conditions.

PubMed

Park, Seong-Im; Kim, Young-Saeng; Kim, Jin-Ju; Mok, Ji-Eun; Kim, Yul-Ho; Park, Hyang-Mi; Kim, Il-Sup; Yoon, Ho-Sung

2017-08-01

Reactive oxygen species, which increase under various environmental stresses, have deleterious effects on plants. An important antioxidant, glutathione, is used to detoxify reactive oxygen species in plant cells and is mainly produced by two enzymes: gamma-glutamylcysteine synthetase (γ-ECS) and glutathione synthetase (GS). To evaluate the functional roles of the glutathione synthetase gene (OsGS) in rice, we generated four independent transgenic rice plants (TG1-TG4) that overexpressed OsGS under the control of the constitutively expressed OsCc1 promoter. When grown under natural paddy field conditions, the TG rice plants exhibited greater growth development, higher chlorophyll content, and higher GSH/GSSH ratios than control wild-type (WT) rice plants. Subsequently, the TG rice plants enhanced redox homeostasis by preventing hydroperoxide-mediated membrane damage, which improved their adaptation to environmental stresses. As a result, TG rice plants improved rice grain yield and total biomass following increases in panicle number and number of spikelets per panicle, despite differences in climate during the cultivation periods of 2014 and 2015. Overall, our results indicate that OsGS overexpression improved redox homeostasis by enhancing the glutathione pool, which resulted in greater tolerance to environmental stresses in the paddy fields. Copyright © 2017. Published by Elsevier GmbH.

Rice Crop Monitoring Using Microwave and Optical Remotely Sensed Image Data

NASA Astrophysics Data System (ADS)

Suga, Y.; Konishi, T.; Takeuchi, S.; Kitano, Y.; Ito, S.

Hiroshima Institute of Technology HIT is operating the direct down-links of microwave and optical satellite data in Japan This study focuses on the validation for rice crop monitoring using microwave and optical remotely sensed image data acquired by satellites referring to ground truth data such as height of crop ratio of crop vegetation cover and leaf area index in the test sites of Japan ENVISAT-1 ASAR data has a capability to capture regularly and to monitor during the rice growing cycle by alternating cross polarization mode images However ASAR data is influenced by several parameters such as landcover structure direction and alignment of rice crop fields in the test sites In this study the validation was carried out combined with microwave and optical satellite image data and ground truth data regarding rice crop fields to investigate the above parameters Multi-temporal multi-direction descending and ascending and multi-angle ASAR alternating cross polarization mode images were used to investigate rice crop growing cycle LANDSAT data were used to detect landcover structure direction and alignment of rice crop fields corresponding to the backscatter of ASAR As the result of this study it was indicated that rice crop growth can be precisely monitored using multiple remotely sensed data and ground truth data considering with spatial spectral temporal and radiometric resolutions

Habitat manipulation in lowland rice-coconut cropping systems of the Philippines--an effective rodent pest management strategy?

PubMed

Stuart, Alexander M; Prescott, Colin V; Singleton, Grant R

2014-06-01

Reduction of vegetation height is recommended as a management strategy for controlling rodent pests of rice in South-east Asia, but there are limited field data to assess its effectiveness. The breeding biology of the main pest species of rodent in the Philippines, Rattus tanezumi, suggests that habitat manipulation in irrigated rice-coconut cropping systems may be an effective strategy to limit the quality and availability of their nesting habitat. The authors imposed a replicated manipulation of vegetation cover in adjacent coconut groves during a single rice-cropping season, and added artificial nest sites to facilitate capture and culling of young. Three trapping sessions in four rice fields (two treatments, two controls) adjacent to coconut groves led to the capture of 176 R. tanezumi, 12 Rattus exulans and seven Chrotomys mindorensis individuals. There was no significant difference in overall abundance between crop stages or between treatments, and there was no treatment effect on damage to tillers or rice yield. Only two R. tanezumi were caught at the artificial nest sites. Habitat manipulation to reduce the quality of R. tanezumi nesting habitat adjacent to rice fields is not effective as a lone rodent management tool in rice-coconut cropping systems. © 2013 Society of Chemical Industry.

Bt rice does not disrupt the host-searching behavior of the parasitoid Cotesia chilonis

PubMed Central

Liu, Qingsong; Romeis, Jörg; Yu, Huilin; Zhang, Yongjun; Li, Yunhe; Peng, Yufa

2015-01-01

We determined whether plant volatiles help explain why Cotesia chilonis (a parasitoid of the target pest Chilo suppressalis) is less abundant in Bt than in non-Bt rice fields. Olfactometer studies revealed that C. chilonis females responded similarly to undamaged Bt and non-Bt rice plants. Parasitoids preferred rice plants damaged by 3rd-instar larvae of C. suppressalis, but did not differentiate between caterpillar-infested Bt and non-Bt plants. According to GC-MS analyses of rice plant volatiles, undamaged Bt and non-Bt rice plants emitted the same number of volatile compounds and there were no significant differences in the quantity of each volatile compound between the treatments. When plants were infested with and damaged by C. suppressalis larvae, both Bt and non-Bt rice plants emitted higher numbers and larger amounts of volatile compounds than undamaged plants, but there were no significant differences between Bt and non-Bt plants. These results demonstrate that the volatile-mediated interactions of rice plants with the parasitoid C. chilonis were not disrupted by the genetic engineering of the plants. We infer that parasitoid numbers are lower in Bt than in non-Bt fields because damage and volatile induction by C. suppressalis larvae are greatly reduced in Bt fields. PMID:26470012

Mapping of Rice Varieties and Sowing Date Using X-Band SAR Data

PubMed Central

Le Toan, Thuy; Nguyen, Lam Dao; Pham Duy, Tien

2018-01-01

Rice is a major staple food for nearly half of the world’s population and has a considerable contribution to the global agricultural economy. While spaceborne Synthetic Aperture Radar (SAR) data have proved to have great potential to provide rice cultivation area, few studies have been performed to provide practical information that meets the user requirements. In rice growing regions where the inter-field crop calendar is not uniform such as in the Mekong Delta in Vietnam, knowledge of the start of season on a field basis, along with the planted rice varieties, is very important for correct field management (timing of irrigation, fertilization, chemical treatment, harvest), and for market assessment of the rice production. The objective of this study is to develop methods using SAR data to retrieve in addition to the rice grown area, the sowing date, and the distinction between long and short cycle varieties. This study makes use of X-band SAR data from COSMO-SkyMed acquired from 19 August to 23 November 2013 covering the Chau Thanh and Thoai Son districts in An Giang province, Viet Nam, characterized by a complex cropping pattern. The SAR data have been analyzed as a function of rice parameters, and the temporal and polarization behaviors of the radar backscatter of different rice varieties have been interpreted physically. New backscatter indicators for the detection of rice paddy area, the estimation of the sowing date, and the mapping of the short cycle and long cycle rice varieties have been developed and assessed. Good accuracy has been found with 92% in rice grown area, 96% on rice long or short cycle, and a root mean square error of 4.3 days in sowing date. The results have been discussed regarding the generality of the methods with respect to the rice cultural practices and the SAR data characteristics. PMID:29361776

[Dynamics and combined injuries of main pest species in rice cropping zones of Yunnan, Southwest China].

PubMed

Dong, Kun; Dong, Yan; Wang, Hai-Long; Zhang, Li-Min; Zan, Qing-An; Chen, Bin; Li, Zheng-Yue

2014-01-01

A series of rice pest injuries (due to pathogens, insects, and weeds) were surveyed in 286 farmers' fields for major rice varieties of three rice cropping zones of Yunnan Province, Southwest China. The composition and dynamics of main pest species were analyzed, and the trend of rice pest succession in Yunnan was discussed based upon landmark publications. The results showed that the three rice cropping zones had different pest characteristics as regard to main species, dynamics and combined injuries. Sheath rot, bacterial leaf blight, rice stripe, leaf hoppers, armyworms and stem borers were serious in the japonica rice zone. Sheath blight and rice stripe were serious in the japonica-indica interlacing zone. Leaf blast, sheath blight, leaf folders and weeds above rice crop canopy were serious in the indica rice zone. False smut, plant hoppers and weeds below rice crop canopy were ubiquitous and serious in the three kinds of rice cropping zones. Many kinds of weed infestation emerged in the whole rice cropping seasons. Echinochloa crusgalli, Sagittaria pygmaea, Potamogeton distinctus and Spirodela polyrhiza were the main species of weeds in the rice cropping zones of Yunnan. Overall, levels of combined injuries due to pests in the japonica rice zone and the indica rice zone were higher than that in the japonica-indica interlacing zone. In terms of the trend of rice pest succession in Yunnan, injuries due to false smut, sheath blight and plant hoppers seemed to be in a worse tendency in all rice cropping zones of Yunnan, while dominants species of weeds in the paddy fields are shifting from the annual weeds to the perennial malignant weeds.

[Effect of transgenic insect-resistant rice on biodiversity].

PubMed

Zhang, Lei; Zhu, Zhen

2011-05-01

Rice is the most important food crops in maintaining food security in China. The loss of China's annual rice production caused by pests is over ten million tons. Present studies showed that the transgenic insect-resistant rice can substantially reduce the application amount of chemical pesticides. In the case of no pesticide use, the pest density in transgenic rice field is significantly lower than that in non-transgenic field, and the neutral insects and natural enemies of pests increased significantly, indicating that the ecological environment and biodiversity toward the positive direction. The gene flow frequency from transgenic rice is dramatically reduced with the distance increases, reaching less than 0.01% at the distance of 6.2 m. Application of transgenic insect-resistant rice in China has an important significance for ensuring food security, maintaining sustainable agricultural development, and protecting the ecological environment and biodiversity. This review summarized the research progress in transgenic insect-resistant rice and its effect on biodiversity. The research directions and development trends of crop pest controlling in future are discussed. These help to promote better use of transgenic insect-resistant rice.

A new approach to evaluate regional methane emission from irrigated rice paddies: Combining process study, modeling and remote sensing into GIS

NASA Astrophysics Data System (ADS)

Ding, Aiju

2000-10-01

A large seasonal variation in methane emission from Texas rice fields was observed in most of the growing seasons from 1989 through 1997. In general, the pattern showed small fluxes in the early season of cultivation and reached maximum at post-heading time, then declined and stopped after fields were drained. The amount of methane emission positively relates to the aboveground biomass, the number of effective stems and tillers, and nitrogen addition. The day-to-day pattern of methane emissions was similar among all cultivars. The seasonal total methane emission shows a significant positive correlation with post-heading plant height. The total methane emission from Texas rice fields was estimated as 33.25 × 109 g in 1993, ranging from 25.85 × 109 g/yr to 40.65 × 109 g/yr. A mitigation technique was developed to obtain both high yield and less methane emission from Texas rice fields. A new approach was also developed to evaluate regional to large-scale methane emission from irrigated rice paddies. By combining modeling, ground truth information and remote sensing into a Geographic Information System (GIS)-a computer based system, the seasonal methane emission from a large area can be calculated efficiently and more accurately. The methodology was tested at the Richmond Irrigation District (RID) site in Texas. The average daily methane emission varied from field to field and even within a single field. The calculated seasonal total methane emission from RID rice fields was as low as 3.34 × 108 g CH4 in 1996 and as high as 7.80 × 108 g CH4 in 1998. To support the application of the estimation method in a worldwide study, an algorithm describing the mapping of irrigated rice paddies from Landsat TM data was demonstrated. The accuracy in 1998- supervised classification approached 95% when cloud cover was taken into account. Model uncertainty and data availability are the two major potential problems in worldwide application of the new approach. A potential alternative model is proposed which allows estimation of regional methane emission from rice plant height.

Breeding biology of Mottled Ducks on agricultural lands in southwestern Louisiana

USGS Publications Warehouse

Durham, R.S.; Afton, A.D.

2006-01-01

Breeding biology of Anas fulvigula maculosa (Mottled Ducks) has been described in coastal marsh and associated habitats, but little information is available for agricultural habitats in Louisiana. We located nests to determine nest-initiation dates and clutch sizes during the primary breeding season (February-May) in 1999 (n = 29) and 2000 (n = 37) on agricultural lands in southwestern Louisiana. In 1999, 60% of located nests were initiated between 22 March and 10 April, whereas in 2000, only 22% of nests were initiated during the same time period. Average clutch size was 0.9 eggs smaller in 2000 than in 1999. Annual differences in reproductive parameters corresponded with extremely dry conditions caused by low rainfall before the laying period in 2000. Flooded rice fields appear to be important loafing and feeding habitat of Mottled Ducks nesting in agricultural lands, especially during drought periods when other wetland types are not available or where natural wetlands have been eliminated.

Rice microstructure

USDA-ARS?s Scientific Manuscript database

An understanding of plant structure is desirable to obtain a clear idea of the overall impact of a crop. A mature rice plant consists of leafy components (left in the field post-harvest) and paddy rice (collected). The rice plant is supported by a hollow stem (culm) with leaf sheaths attached to nod...

Studying the Impacts of Environmental Factors and Agricultural Management on Methane Emissions from Rice Paddies Using a Land Surface Model

NASA Astrophysics Data System (ADS)

Lin, T. S.; Gahlot, S.; Shu, S.; Jain, A. K.; Kheshgi, H. S.

2017-12-01

Continued growth in population is projected to drive increased future demand for rice and the methane emissions associated with its production. However, observational studies of methane emissions from rice have reported seemingly conflicting results and do not all support this projection. In this study we couple an ecophysiological process-based rice paddy module and a methane emission module with a land surface model, Integrated Science Assessment Model (ISAM), to study the impacts of various environmental factors and agricultural management practices on rice production and methane emissions from rice fields. This coupled modeling framework accounts for dynamic rice growth processes with adaptation of photosynthesis, rice-specific phenology, biomass accumulation, leaf area development and structures responses to water, temperature, light and nutrient stresses. The coupled model is calibrated and validated with observations from various rice cultivation fields. We find that the differing results of observational studies can be caused by the interactions of environmental factors, including climate, atmospheric CO2 concentration, and N deposition, and agricultural management practices, such as irrigation and N fertilizer applications, with rice production at spatial and temporal scales.

Ecological mechanisms underlying the sustainability of the agricultural heritage rice-fish coculture system.

PubMed

Xie, Jian; Hu, Liangliang; Tang, Jianjun; Wu, Xue; Li, Nana; Yuan, Yongge; Yang, Haishui; Zhang, Jiaen; Luo, Shiming; Chen, Xin

2011-12-13

For centuries, traditional agricultural systems have contributed to food and livelihood security throughout the world. Recognizing the ecological legacy in the traditional agricultural systems may help us develop novel sustainable agriculture. We examine how rice-fish coculture (RF), which has been designated a "globally important agricultural heritage system," has been maintained for over 1,200 y in south China. A field survey demonstrated that although rice yield and rice-yield stability are similar in RF and rice monoculture (RM), RF requires 68% less pesticide and 24% less chemical fertilizer than RM. A field experiment confirmed this result. We documented that a mutually beneficial relationship between rice and fish develops in RF: Fish reduce rice pests and rice favors fish by moderating the water environment. This positive relationship between rice and fish reduces the need for pesticides in RF. Our results also indicate a complementary use of nitrogen (N) between rice and fish in RF, resulting in low N fertilizer application and low N release into the environment. These findings provide unique insights into how positive interactions and complementary use of resource between species generate emergent ecosystem properties and how modern agricultural systems might be improved by exploiting synergies between species.

Waterbirds foods in winter-managed ricefields in Mississippi

USGS Publications Warehouse

Manley, S.W.; Kaminski, R.M.; Reinecke, K.J.; Gerard, P.D.

2004-01-01

Ricefields are important foraging habitats for waterfowl and other waterbirds in primary North American wintering regions. We conducted a large-scale experiment to test effects of post-harvest ricefield treatment, winter water management, and temporal factors on availabilities of rice, moist-soil plant seeds, aquatic invertebrates, and green forage in the Mississippi Alluvial Valley (MAV), Mississippi, USA, fall-winter 1995-1997. Our results revealed that a large decrease in rice grain occurred between harvest and early winter (79-99%), which, if generally true throughout the MAV, would have critical implications on foraging carrying capacity of ricefields for migrating and wintering waterbirds. During the remainder of winter, food resources generally were similar among treatment combinations. An exception was biomass of aquatic invertebrates, which demonstrated potential to increase by late winter in ricefields that remained flooded. We offer revised calculations of foraging carrying capacity for waterfowl in MAV ricefields and recommend continuing research and management designed to increase availability of residual rice and aquatic invertebrates in winter.

NO X fluxes from several typical agricultural fields during summer-autumn in the Yangtze Delta, China

NASA Astrophysics Data System (ADS)

Fang, Shuangxi; Yujing, Mu

NO X fluxes from three kinds of vegetable lands and a rice field were measured during summer-autumn in the Yangtze Delta, China. The average NO fluxes from the rice fields (RF), celery field (CE), maize field (MA) and cowpea field (CP) were 4.1, 30.8, 54 and 32.2 ng N m -2 s -1, respectively; and the average NO 2 fluxes were -2.12, 0.68, 1.33 and 0.5 ng N m -2 s -1, respectively. The liquid N fertilizer (the mixture of swine excrement and urine) which is widely applied to vegetable lands by Chinese farmers was found to quickly stimulate NO emission, and have significant contribution to NO emission from the investigated vegetable lands. Apparent linearity correlations were found between NO 2 fluxes and the ambient concentrations of the rice fields, with a compensation point of about 2.84 μg m -3. Total emissions of NO during summer-autumn time from this area were roughly estimated to be 4.1 and 8.4 Gg N for rice field and vegetable lands, respectively.

PCDD/F EMISSIONS FROM BURNING WHEAT AND RICE FIELD RESIDUE

EPA Science Inventory

The paper presents the first known values for emissions of polychlorinated dibenzodioxins and dibenzofurans (PCDDs/Fs) from combustion of agricultural field biomass. Wheat and rice straw stubble collected from two western U.S. states were tested in a field burn simulation to dete...

A Co-Opted Hormonal Cascade Activates Dormant Adventitious Root Primordia upon Flooding in Solanum dulcamara.

PubMed

Dawood, Thikra; Yang, Xinping; Visser, Eric J W; Te Beek, Tim A H; Kensche, Philip R; Cristescu, Simona M; Lee, Sangseok; Floková, Kristýna; Nguyen, Duy; Mariani, Celestina; Rieu, Ivo

2016-04-01

Soil flooding is a common stress factor affecting plants. To sustain root function in the hypoxic environment, flooding-tolerant plants may form new, aerenchymatous adventitious roots (ARs), originating from preformed, dormant primordia on the stem. We investigated the signaling pathway behind AR primordium reactivation in the dicot species Solanum dulcamara Transcriptome analysis indicated that flooding imposes a state of quiescence on the stem tissue, while increasing cellular activity in the AR primordia. Flooding led to ethylene accumulation in the lower stem region and subsequently to a drop in abscisic acid (ABA) level in both stem and AR primordia tissue. Whereas ABA treatment prevented activation of AR primordia by flooding, inhibition of ABA synthesis was sufficient to activate them in absence of flooding. Together, this reveals that there is a highly tissue-specific response to reduced ABA levels. The central role for ABA in the response differentiates the pathway identified here from the AR emergence pathway known from rice (Oryza sativa). Flooding and ethylene treatment also induced expression of the polar auxin transporter PIN2, and silencing of this gene or chemical inhibition of auxin transport inhibited primordium activation, even though ABA levels were reduced. Auxin treatment, however, was not sufficient for AR emergence, indicating that the auxin pathway acts in parallel with the requirement for ABA reduction. In conclusion, adaptation of S. dulcamara to wet habitats involved co-option of a hormonal signaling cascade well known to regulate shoot growth responses, to direct a root developmental program upon soil flooding. © 2016 American Society of Plant Biologists. All Rights Reserved.

A Co-Opted Hormonal Cascade Activates Dormant Adventitious Root Primordia upon Flooding in Solanum dulcamara1[OPEN

PubMed Central

Dawood, Thikra; Kensche, Philip R.; Cristescu, Simona M.; Mariani, Celestina

2016-01-01

Soil flooding is a common stress factor affecting plants. To sustain root function in the hypoxic environment, flooding-tolerant plants may form new, aerenchymatous adventitious roots (ARs), originating from preformed, dormant primordia on the stem. We investigated the signaling pathway behind AR primordium reactivation in the dicot species Solanum dulcamara. Transcriptome analysis indicated that flooding imposes a state of quiescence on the stem tissue, while increasing cellular activity in the AR primordia. Flooding led to ethylene accumulation in the lower stem region and subsequently to a drop in abscisic acid (ABA) level in both stem and AR primordia tissue. Whereas ABA treatment prevented activation of AR primordia by flooding, inhibition of ABA synthesis was sufficient to activate them in absence of flooding. Together, this reveals that there is a highly tissue-specific response to reduced ABA levels. The central role for ABA in the response differentiates the pathway identified here from the AR emergence pathway known from rice (Oryza sativa). Flooding and ethylene treatment also induced expression of the polar auxin transporter PIN2, and silencing of this gene or chemical inhibition of auxin transport inhibited primordium activation, even though ABA levels were reduced. Auxin treatment, however, was not sufficient for AR emergence, indicating that the auxin pathway acts in parallel with the requirement for ABA reduction. In conclusion, adaptation of S. dulcamara to wet habitats involved co-option of a hormonal signaling cascade well known to regulate shoot growth responses, to direct a root developmental program upon soil flooding. PMID:26850278

Examination of the semi-automatic calculation technique of vegetation cover rate by digital camera images.

NASA Astrophysics Data System (ADS)

Takemine, S.; Rikimaru, A.; Takahashi, K.

The rice is one of the staple foods in the world High quality rice production requires periodically collecting rice growth data to control the growth of rice The height of plant the number of stem the color of leaf is well known parameters to indicate rice growth Rice growth diagnosis method based on these parameters is used operationally in Japan although collecting these parameters by field survey needs a lot of labor and time Recently a laborsaving method for rice growth diagnosis is proposed which is based on vegetation cover rate of rice Vegetation cover rate of rice is calculated based on discriminating rice plant areas in a digital camera image which is photographed in nadir direction Discrimination of rice plant areas in the image was done by the automatic binarization processing However in the case of vegetation cover rate calculation method depending on the automatic binarization process there is a possibility to decrease vegetation cover rate against growth of rice In this paper a calculation method of vegetation cover rate was proposed which based on the automatic binarization process and referred to the growth hysteresis information For several images obtained by field survey during rice growing season vegetation cover rate was calculated by the conventional automatic binarization processing and the proposed method respectively And vegetation cover rate of both methods was compared with reference value obtained by visual interpretation As a result of comparison the accuracy of discriminating rice plant areas was increased by the proposed

Effect of irrigation and silicon fertilizer on total rice grain arsenic content and yield

USDA-ARS?s Scientific Manuscript database

Field tests were conducted for two years with rice grown with different irrigation systems and rates of calcium silicate fertilizer to determine the effects on brown rice arsenic (As) levels and rough rice yields. Irrigation systems were sprinkler irrigation using a center pivot system, intermitten...

Development of Novel Glyphosate-Tolerant Japonica Rice Lines: A Step Toward Commercial Release.

PubMed

Cui, Ying; Huang, Shuqing; Liu, Ziduo; Yi, Shuyuan; Zhou, Fei; Chen, Hao; Lin, Yongjun

2016-01-01

Glyphosate is the most widely used herbicide for its low cost and high efficiency. However, it is rarely applied directly in rice field due to its toxicity to rice. Therefore, glyphosate-tolerant rice can greatly decrease the cost of rice production and provide a more effective weed management strategy. Although, several approaches to develop transgenic rice with glyphosate tolerance have been reported, the agronomic performances of these plants have not been well evaluated, and the feasibility of commercial production has not been confirmed yet. Here, a novel glyphosate-tolerant gene cloned from the bacterium Isoptericola variabilis was identified, codon optimized (designated as I. variabilis-EPSPS (*)), and transferred into Zhonghua11, a widely used japonica rice cultivar. After systematic analysis of the transgene integration via PCR, Southern blot and flanking sequence isolation, three transgenic lines with only one intact I. variabilis-EPSPS (*) expression cassette integrated into intergenic regions were identified. Seed test results showed that the glyphosate tolerance of the transgenic rice was about 240 times that of wild type on plant medium. The glyphosate tolerance of transgenic rice lines was further evaluated based on comprehensive agronomic performances in the field with T3 and T5generations in a 2-year assay, which showed that they were rarely affected by glyphosate even when the dosage was 8400 g ha(-1). To our knowledge, this is the first demonstration of the development of glyphosate-tolerant rice lines based on a comprehensive analysis of agronomic performances in the field. Taken together, the results suggest that the selected glyphosate-tolerant rice lines are highly tolerant to glyphosate and have the possibility of commercial release. I. variabilis-EPSPS (*) also can be a promising candidate gene in other species for developing glyphosate-tolerant crops.

Carbon dioxide emissions and energy balance closure before, during, and after biomass burning in mid-South rice fields

NASA Astrophysics Data System (ADS)

Fong, B.; Adviento-Borbe, A.; Reba, M. L.; Runkle, B.; Suvocarev, K.

2017-12-01

Biomass burning or field burning is a crop management practice that removes rice straw, reduces tillage, controls pests and releases nutrients for the next cropping season. Current field burning emissions are not included in agricultural field annual emissions largely because of the lack of studies, especially on the field scale. Field burning measurements are important for greenhouse gas emission inventories and quantifying the annual carbon footprint of rice. Paired eddy covariance systems were used to measure energy balance, CO2 fluxes, and H2O fluxes in mid-South US rice fields (total area of 25 ha) before, during and after biomass burning for 20 days after harvest. During the biomass burning, air temperatures increased 29°C, while ambient CO2 concentration increased from 402 to 16,567 ppm and H2O concentrations increased from 18.73 to 25.62 ppt. For the burning period, 67-86 kg CO2 ha-1 period-1 was emitted calculated by integrating fluxes over the biomass burning event. However, the estimated emission using aboveground biomass and combustion factors was calculated as 11,733 kg CO2 ha-1 period-1. Part of the difference could be attributed to sensor sensitivity decreasing 80% during burning for two minutes due to smoke. Net ecosystem exchange (NEE) increased by a factor of two, 1.14 before burning to 2.44 μmol m-2 s-1 possibly due to greater reduction of plant material and photosynthesis following burning. This study highlights the contribution of rice straw burning to total CO2 emissions from rice production.

Integrated rice-duck farming decreases global warming potential and increases net ecosystem economic budget in central China.

PubMed

Sheng, Feng; Cao, Cou-Gui; Li, Cheng-Fang

2018-05-31

Over the past decades, many attempts have been made to assess the effects of integrated rice-duck farming on greenhouse gas emissions, use efficient of energy, soil fertility, and economic significance. However, very few studies have been focused on the effects of the farming on net ecosystem economic budget (NEEB). Here, a 2-year field experiment was conducted to comprehensively investigate the effects of ducks raised in paddy fields on CH 4 and N 2 O emissions, global warming potential (GWP), rice grain yield, and NEEB in central China. The experiment included two treatments: integrated rice-duck farming (RD) and conventional rice farming (R). The introduction of ducks into the paddy fields markedly increased the rice grain yield due to enhanced tiller number and root bleeding rate. RD treatment significantly elevated the N 2 O emissions (p < 0.05) but decreased CH 4 emissions (p < 0.05) during rice growing seasons compared with R treatment. Analysis of GWP based on CH 4 and N 2 O emissions showed that compared with R treatment, RD treatment significantly decreased the GWP by 28.1 and 28.0% and reduced the greenhouse gas intensity by 30.6 and 29.8% in 2009 and 2010, respectively. In addition, RD treatment increased NEEB by 40.8 and 39.7% respectively in 2009 and 2010 relative to R treatment. Taken together, our results suggest that the integrated rice-duck farming system is an effective strategy to optimize the economic and environmental benefits of paddy fields in central China.

Can rice field channels contribute to biodiversity conservation in Southern Brazilian wetlands?

PubMed

Maltchik, Leonardo; Rolon, Ana Silvia; Stenert, Cristina; Machado, Iberê Farina; Rocha, Odete

2011-12-01

Conservation of species in agroecosystems has attracted attention. Irrigation channels can improve habitats and offer conditions for freshwater species conservation. Two questions from biodiversity conservation point of view are: 1) Can the irrigated channels maintain a rich diversity of macrophytes, macroinvertebrates and amphibians over the cultivation cycle? 2) Do richness, abundance and composition of aquatic species change over the rice cultivation cycle? For this, a set of four rice field channels was randomly selected in Southern Brazilian wetlands. In each channel, six sample collection events were carried out over the rice cultivation cycle (June 2005 to June 2006). A total of 160 taxa were identified in irrigated channels, including 59 macrophyte species, 91 taxa of macroinvertebrate and 10 amphibian species. The richness and abundance of macrophytes, macroinvertebrates and amphibians did not change significantly over the rice cultivation cycle. However, the species composition of these groups in the irrigation channels varied between uncultivated and cultivated periods. Our results showed that the species diversity found in the irrigation channels, together with the permanence of water enables these man-made aquatic networks to function as important systems that can contribute to the conservation of biodiversity in regions where the wetlands were converted into rice fields. The conservation of the species in agriculture, such as rice field channels, may be an important alternative for biodiversity conservation in Southern Brazil, where more than 90% of wetland systems have already been lost and the remaining ones are still at high risk due to the expansion of rice production.

Study of mosquito fauna in rice ecosystems around Hanoi, northern Vietnam.

PubMed

Ohba, Shin-ya; Van Soai, Nguyen; Van Anh, Dinh Thi; Nguyen, Yen T; Takagi, Masahiro

2015-02-01

Species of the Culex vishnui subgroup, Cx. fuscocephala and Cx. gelidus, which are known Japanese encephalitis (JE) vectors, are distributed in rice agroecosystems in Asian countries. Hence, although ecological studies of rice agroecosystems in northern Vietnam are necessary, very few integrated studies of breeding habitats of mosquitoes, including JE vectors, have been conducted. We carried out a field study and investigated the mosquito fauna in six rice production areas in northern Vietnam during the rainy and dry seasons of 2009. Mosquitoes and potential mosquito predators were collected from aquatic habitats by using larval dippers. We collected 1780 Culex individuals (including 254 Cx. tritaeniorhynchus; 113 Cx. vishnui, 58 Cx. vishnui complex, consisting of Cx. vishnui and Cx. pseudovishnui; 12 Cx. gelidus; 1 Cx. bitaeniorhynchus; and 1 Cx. fuscocephala), 148 Anopheles individuals (including 5 An. vagus), 1 Mansonia annulifera, and 1 Mimomyia chamberlaini during the rainy season. During the dry season, we collected 176 Culex individuals (including 33 Cx. vishnui, 24 Cx. tritaeniorhynchus, 8 Cx. vishnui complex, and 1 Cx. gelidus) and 186 Anopheles individuals (including 9 An. tessellatus, 2 An. kochi, and 2 An. barbumbrosus). We found mosquitoes in all aquatic habitats, namely, rice fields, ditches, ponds, wetlands, irrigation canals, and rice nurseries, and Cx. tritaeniorhynchus and Cx. vishnui complex were found in all the above six areas. Heteroptera such as Micronecta, Veliidae, and Pleidae were abundant and widely distributed in both the seasons. The abundance of mosquito larvae was higher in the rice fields, ditches, and ponds during the rainy season than during the dry season. Cx. tritaeniorhynchus, Cx. vishnui complex, Cx. fuscocephala, and Cx. gelidus were abundant in rice agroecosystems (rice fields, ditches, ponds, and wetlands) in northern Vietnam, and their abundance was high during the rainy season. These findings deepen our understanding of mosquito ecology and strengthen mosquito control strategies to be applied in rice ecosystems Vietnam in the future. Copyright © 2014 Elsevier B.V. All rights reserved.