Systematic mapping of bedrock and habitats along the Florida reef tract: central Key Largo to Halfmoon Shoal (Gulf of Mexico)

USGS Publications Warehouse

Lidz, Barbara H.; Reich, Christopher D.; Shinn, Eugene A.

2007-01-01

The fragile coral reefs of the Florida Keys form the largest living coral reef ecosystem in the continental United States. Lining the shallow outer shelf approximately 5 to 7 km seaward of the keys, the reefs have national aesthetic and resource value. As recently as the 1970s, the coral reefs were the heart of a vibrant ecosystem. Since then, the health of all ecosystem components has declined markedly due to a variety of environmental stressors . Corals are succumbing to bleaching and diseases. Species that are the building blocks of solid reef framework are increasingly being replaced by species that do not construct reef framework. Algal proliferation is increasing competition for space and hard surfaces needed by coral larvae for settlement. Decline of the coral reef ecosystem has significant negative implications for economic vitality of the region, ranging from viability of the tourism industry attracted by the aesthetics to commercial fisheries drawn by the resources. At risk of loss are biologic habitats and reef resources, including interconnected habitats for endangered species in shoreline mangroves, productive nearshore marine and wetland nurseries, and economic offshore fisheries. In 1997, the U.S. Geological Survey's Coastal and Marine Geology Program undertook a comprehensive 7-year-long mission to consolidate, synthesize, and map new (1997) and existing geologic and biologic information into a digitized regional database and one-volume reference source on the geologic history of the Florida Keys reef tract (this report). The project was conducted in cooperation with the National Oceanic and Atmospheric Administration's National Marine Sanctuary Program. The purpose was to examine the natural evolution and demise of several coral reef ecosystems over the past 325,000 years, with an eye toward gaining a better understanding of the cause of the reef decline observed today. Scientific data and datasets presented in this report are intended for use by others in ongoing efforts to delineate which components of reef decline in the Florida Keys may be natural and which may be a result of human activities. Beyond scientific baseline datasets, this report also incorporates environmental, social, and historical aspects of the Florida Keys, including the impact of exploratory oil wells on benthic habitats off Florida.

Expanded Florida reef development during the mid-Pliocene warm period

NASA Astrophysics Data System (ADS)

Klaus, James S.; Meeder, John F.; McNeill, Donald F.; Woodhead, Jon F.; Swart, Peter K.

2017-05-01

The coral fauna of the Tamiami Formation documents a northern expansion of reef development along the Florida Peninsula during the mid-Pliocene warm period (MPWP). Radiometric dating (U-Pb) of Solenastrea bournoni produced an age of 2.99 ± 0.11 Ma, constraining reef development to the MPWP and the peak of Plio-Pleistocene faunal turnover; subsequent to the final closure of the Central American Seaway (CAS) but prior to major Northern Hemisphere Glaciation (NHG). Coral faunal analyses are based on a total of 1614 coral specimens collected along a 165 km stretch of the west Florida coast, and included rarefaction and detrended correspondence analysis (DCA). A total of 60 coral species occur within the Tamiami Formation, with faunal assemblages ranging from 42 to 87% extinct taxa. The Tamiami collections can be split into a southern "reef" assemblage with high diversity of stenotopic taxa and a northern "non-reef" assemblage with lower diversity eurytopic taxa. The southern reef assemblage contains framework buildups of the dominant tropical taxa Stylophora affinis, Orbicella annularis, and Acropora cervicornis. We interpret enhanced west Florida reef development during the middle Pliocene to be a product of more equitable sea surface temperatures, and reduced salinity fluctuations associated with higher sea levels. While mean sea surface temperature estimates based on oxygen isotopic analysis of the coral Solenastrea bournoni (25.3 °C) are similar to present day values (26 °C), a completely flooded southern Florida Platform in the Pliocene would be less prone to salinity fluctuations associated with coastal runoff and extreme cold-water events during winter storms. While higher latitude range shifts of tropical reef corals associated with current global climate change have been documented elsewhere in the world, we do not foresee the West Florida Shelf being conducive to significant range shifts in tropical coral taxa or reef development within the coming century.

First hundred years of research on western Atlantic coral reefs 1850-1950

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ginsburg, R.N.

1985-01-01

The history of research on coral reefs of the Western Atlantic is the history of geology for the same period write small. The inter-related, pioneer researchers were led by the Agassizs, Louis and his son Alexander, who explored and described reefs in Florida and the Bahamas. Among their followers were Alfred G. Mayor the founder-director and premier researcher of the Carnegie Laboratory in the Dry Tortugas; C.F. Hartt who first described southernmost reefs off Brazil; Louis Pourtales whose dredging off the Florida coast stimulated interest in organic limestones; and T. Wayland Vaughan whose research ranged from coral biology to themore » regional geology and history of reefs. The initial 19th century research was sparked by a combination of practical and scientific questions and the what and where of exploration. To build lighthouses on the wreck-strewn Florida reefs one needs to know their foundations. Is the present-day Florida platform a result of reef growth during subsidence a la Darwin or are the reefs merely icing on a limestone cake. In the second phase of research extending from the early 1900's to 1940's, the singular aspects are two dynamic researchers, Alfred Mayor and T. Wayland Vaughan and the Carnegie Institution's Marine Biology Laboratory in the Dry Tortugas. Mayor through his own biological research and his stimulations of other scientists made the Carnegie Laboratory the world center for reef research. Vaughan pioneered connections between reef-building corals, reef deposits and their logical record.« less

Multibeam mapping of the West Florida Shelf, Gulf of Mexico

USGS Publications Warehouse

Gardner, James V.; Dartnell, Peter; Sulak, Kenneth J.

2002-01-01

A zone of deep-water reefs is thought to extend from the mid and outer shelf south of Mississippi and Alabama to at least the northwestern Florida shelf off Panama City, Florida (Figure 1). The reefs off Mississippi and Alabama are found in water depths of 60 to 120 m (Ludwick and Walton, 1957; Gardner et al., 2001, in press) and were the focus of a multibeam echosounder (MBES) mapping survey by the U.S. Geological Survey (USGS) in 2000 (Gardner et al., 2000, Gardner et al., 2001, in press). If this deep-water-reef trend does exist along the northwestern Florida shelf, then it is critical to determine the accurate geomorphology and reef type that occur because of their importance as benthic habitats for fisheries. Georeferenced high-resolution mapping of bathymetry is a fundamental first step in the study of areas suspected to be critical habitats. Morphology is thought to be critical to defining the distribution of dominant demersal plankton/planktivores communities. Fish faunas of shallow hermatypic reefs have been well studied, but those of deep ahermatypic reefs have been relatively ignored. The ecology of deep-water ahermatypic reefs is fundamentally different from hermatypic reefs because autochthonous intracellular symbiotic zooxanthellae (the carbon source for hermatypic corals) do not form the base of the trophic web in ahermatypic reefs. Instead, exogenous plankton, transported to the reef by currents, serves as the primary carbon source. Thus, one of the principle uses of the morphology data will be to identify whether any reefs found are hermatypic or ahermatypic in origin.

Hurricanes and anchors: preliminary results from the National Park Service regional reef assessment program

USGS Publications Warehouse

Rogers, Caroline S.

1994-01-01

The U .S . National Park Service NPS began a Regional Assessment Program for coral reefs in the U.S. Virgin Islands and Florida in 1988. Scientists from NPS and six other institutions have now established longterm monitoring sites at Virgin Islands National Park St. John, USVI, Buck Island Reef National Monument St. Croix, USVI, Biscayne National Park Florida and Fort Jefferson National Monument Florida. Hurricane Hugo passed through the USVI in 1989, causing severe destruction in some reef areas while leaving others untouched. Patchy damage to reefs in Florida was also noted after Hurricane Andrew; damage from this August 1992 storm is still being assessed. Fort Jefferson National Monument escaped the onslaught of Andrew. No significant recovery in live coral cover has been evident at the Buck Island or Virgin Islands National Park VINP study sites 3.5 years after Hurricane Hugo. Similarly, no recovery was evident at another site in St. John which was destroyed by a large anchor 4.5 years ago.

Evaluating Coral Health in La Parguera, Puerto Rico, and Southeastern Florida: Comparison of Satellite-Based Sea Surface Temperature to In Situ Observations

NASA Astrophysics Data System (ADS)

Gomez, A. M.; McDonald, K. C.; Shein, K. A.; Devries, S. L.; Armstrong, R.; Carlo, M.

2017-12-01

The third global coral bleaching event, which began in mid-2014, is a major environmental stressor that has been causing significant documented damage to coral reefs in all tropical ocean basins. This worldwide phenomenon is the longest and largest coral bleaching event on record and now finally appears to be ending. During this event, some coral colonies proved to be more resilient to increased ocean temperatures while others bleached severely. This research investigates the spatial and temporal variability of bleaching stress on coral reefs in La Parguera, Puerto Rico, and Southeastern Florida to help further understand the role of temperature and light in coral bleaching. We examine the microclimate within two coral reef systems, using in situ collections of temperature and light data from data loggers deployed throughout Cayo Enrique and Cayo Mario in La Parguera, and Lauderdale-By-The-Sea in FLorida. The in situ measurements are compared to NOAA Coral Reef Watch's 5-km sea surface temperature data as well as to the associated Light Stress Damage Product. Research outcomes include statistical analyses of in situ measurements with satellite datasets supporting enhanced interpretation of satellite-based SST and light products, and ecological niche modeling to assess where corals could potentially survive under future climate conditions. Additional understanding of the microclimate encompassing coral reefs and improved satellite SST and light data will ultimately help coral reef ecosystem managers and policy makers in prioritizing resources toward the monitoring and protection of coral reef ecosystems.

Contrasts within an outlier-reef system: Evidence for differential quaternary evolution, south Florida windward margin, U.S.A.

USGS Publications Warehouse

Lidz, B.H.; Shinn, E.A.; Hine, A.C.; Locker, S.D.

1997-01-01

Closely spaced, high-resolution, seismic-reflection profiles acquired off the upper Florida Keys (i.e., north) reveal a platform-margin reef-and-trough system grossly similar to, yet quite different from, that previously described off the lower Keys (i.e., south). Profiles and maps generated for both areas show that development was controlled by antecedent Pleistocene topography (presence or absence of an upper-slope bedrock terrace), sediment availability, fluctuating sea level, and coral growth rate and distribution. The north terrace is sediment-covered and exhibits linear, buried, low-relief, seismic features of unknown character and origin. The south terrace is essentially sediment-free and supports multiple, massive, high-relief outlier reefs. Uranium disequilibrium series dates on outlier-reef corals indicate a Pleistocene age (~83-84 ka). A massive Pleistocene reef with both aggradational (north) and progradational (south) aspects forms the modern margin escarpment landward of the terrace. Depending upon interpretation (the north margin-escarpment reef may or may not be an outlier reef), the north margin is either more advanced or less advanced than the south margin. During Holocene sea-level rise, Pleistocene bedrock was inundated earlier and faster first to the north (deeper offbank terrace), then to the south (deeper platform surface). Holocene overgrowth is thick (8 m) on the north outer-bank reefs but thin (0.3 m) on the south outlier reefs. Differential evolution resulted from interplay between fluctuating sea level and energy regime established by prevailing east-southeasterly winds and waves along an arcuate (ENE-WSW) platform margin.

Analyzing the Effects of Climate Change on Sea Surface Temperature in Monitoring Coral Reef Health in the Florida Keys Using Sea Surface Temperature Data

NASA Technical Reports Server (NTRS)

Jones, Jason; Burbank, Renane; Billiot, Amanda; Schultz, Logan

2011-01-01

This presentation discusses use of 4 kilometer satellite-based sea surface temperature (SST) data to monitor and assess coral reef areas of the Florida Keys. There are growing concerns about the impacts of climate change on coral reef systems throughout the world. Satellite remote sensing technology is being used for monitoring coral reef areas with the goal of understanding the climatic and oceanic changes that can lead to coral bleaching events. Elevated SST is a well-documented cause of coral bleaching events. Some coral monitoring studies have used 50 km data from the Advanced Very High Resolution Radiometer (AVHRR) to study the relationships of sea surface temperature anomalies to bleaching events. In partnership with NOAA's Office of National Marine Sanctuaries and the University of South Florida's Institute for Marine Remote Sensing, this project utilized higher resolution SST data from the Terra's Moderate Resolution Imaging Spectroradiometer (MODIS) and AVHRR. SST data for 2000-2010 was employed to compute sea surface temperature anomalies within the study area. The 4 km SST anomaly products enabled visualization of SST levels for known coral bleaching events from 2000-2010.

THE ROLE OF REEF FISH IN THE TRANSMISSION DYNAMICS OF BLACK-BAND DISEASE IN THE FLORIDA KEYS

EPA Science Inventory

Aeby, Greta S. and Deborah L. Santavy. In press. Role of Reef Fish in the Transmission Dynamics of Black-Band Disease in the Florida Keys (Abstract). To be presented at the 10th International Coral Reef Symposium, 28 June-2 July 2004, Okinawa, Japan. 1 p. (ERL,GB R998).

T...

Is proximity to land-based sources of coral stressors an appropriate measure of risk to coral reefs? An example from the Florida Reef Tract.

PubMed

Lirman, Diego; Fong, Peggy

2007-06-01

Localized declines in coral condition are commonly linked to land-based sources of stressors that influence gradients of water quality, and the distance to sources of stressors is commonly used as a proxy for predicting the vulnerability and future status of reef resources. In this study, we evaluated explicitly whether proximity to shore and connections to coastal bays, two measures of potential land-based sources of disturbance, influence coral community and population structure, and the abundance, distribution, and condition of corals within patch reefs of the Florida Reef Tract. In the Florida Keys, long-term monitoring has documented significant differences in water quality along a cross-shelf gradient. Inshore habitats exhibit higher levels of nutrients (DIN and TP), TOC, turbidity, and light attenuation, and these levels decrease with increasing distance from shore and connections to tidal bays. In clear contrast to these patterns of water quality, corals on inshore patch reefs exhibited significantly higher coral cover, higher growth rates, and lower partial mortality rates than those documented in similar offshore habitats. Coral recruitment rates did not differ between inshore and offshore habitats. Corals on patch reefs closest to shore had well-spread population structures numerically dominated by intermediate to large colonies, while offshore populations showed narrower size-distributions that become increasingly positively skewed. Differences in size-structure of coral populations were attributed to faster growth and lower rates of partial mortality at inshore habitats. While the underlying causes for the favorable condition of inshore coral communities are not yet known, we hypothesize that the ability of corals to shift their trophic mode under adverse environmental conditions may be partly responsible for the observed patterns, as shown in other reef systems. This study, based on data collected from a uniform reef habitat type and coral species with diverse life-history and stress-response patterns from a heavily exploited reef system, showed that proximity to potential sources of stressors may not always prove an adequate proxy for assigning potential risks to reef health, and that hypothesized patterns of coral cover, population size-structure, growth, and mortality are not always directly related to water quality gradients.

Sewage in ground water in the Florida Keys

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shinn, E.A.

1995-12-31

More than 24,000 septic tanks, 5,000 cesspools, and greater than 600 shallow disposal wells introduce sewage effluents into porous and permeable limestone underlying the Florida Keys. To porous and permeable limestone underlying the Florida Keys. To assess the fate of sewage nutrients, 21 2- to 20-m-deep wells were core drilled and completed as water-monitoring wells. The wells were sampled quarterly and analyzed for 17 parameters. including nutrients and bacteria. Nutrients (mainly NH4, - which is 30 to 40 times higher than in surface sea water) were detected in ground water beneath the Keys and offshore coral reefs. Highest levels weremore » beneath reefs 5 to 8 km offshore. Ground waters were generally hypersaline and fecal bacteria (fecal coliform and streptococci) were detected in ground water beneath living coral reefs. Higher sea level on the Florida Bay side of the Keys is proposed as the mechanism for forcing ground water toward offshore coral reefs. Tidal pumping, which is more pronounced near the Keys, causes leakage of ground water where the sediment is thin. Areas lacking sediment cover consist of bare limestone bedrock or permeable coral reefs. These are the areas where coral diseases and algal growth have increased in recent years. Pollutants entering the ground water beneath the Florida Keys are likely to be transported seaward beneath impermeable Holocene sediments and may be upwelling through coral reefs and other hardbottom communities.« less

An Integrated Study of the Degadation of a Reefscape in the Florida Keys

NASA Astrophysics Data System (ADS)

Zawada, D. G.; Yates, K. K.

2016-02-01

Worldwide, many coral reefs are contending with a number of stressors driven by local-, regional-, and global-scale processes. Examples include bleaching, disease, overfishing, acidification, ocean warming, and sea level rise. Understanding the impact of these stressors requires a better understanding of the interplay between various reef processes over a range of spatial scales and from the perspective of different scientific disciplines. For an 18-month period, we applied a multidisciplinary, reefscape-characterization strategy to study a portion of the Florida Reef Tract. Our approach coupled biogeochemical, sedimentological, and geophysical observations over a continuum of spatial scales (from mm to km) through co-located, autonomous instrumentation and synchronized in situ sampling. Specifically, we measured carbonate system parameters; acquired current profiles at 4 reef locations; and characterized reef morphology, benthic cover, and sediment production. The synthesis of these data is enabling us to explore and explain linkages between geochemical and physical processes related to issues of reef accretion/erosion, habitat distributions, and environmental conditions. This presentation focuses on the impact of these processes on carbonate accretion and erosion at our study site and the associated coastal vulnerability due to the degradation of these natural, protective barriers.

CDOM PRODUCTION BY MANGROVE LEAF LITTER AND SARGASSUM COLONIES IN FLORIDA KEYS COASTAL WATERS

EPA Science Inventory

We have investigated the importance of leaf litter from red mangroves (Rhizophora mangle) and living Sargassum plants as sources of chromophoric dissolved organic matter (CDOM) to the coastal ocean waters and coral reef system of the Florida Keys. The magnitude of UVB exposure t...

Project O.R.B (Operation Reef Ball): Creating Artificial Reefs, Educating the Community

NASA Astrophysics Data System (ADS)

Phipps, A.

2012-04-01

The Project O.R.B. (Operation Reef Ball) team at South Plantation High School's Everglades Restoration & Environmental Science Magnet Program is trying to help our ailing south Florida coral reefs by constructing, deploying, and monitoring designed artificial reefs. Students partnered with the Reef Ball Foundation, local concrete companies, state parks, Girl Scouts, Sea Scouts, local universities and environmental agencies to construct concrete reef balls, each weighing approximately 500 lbs (227 kg). Students then deployed two artificial reefs consisting of over 30 concrete reef balls in two sites previously permitted for artificial reef deployment. One artificial reef was placed approximately 1.5 miles (2.4 km) offshore of Golden Beach in Miami-Dade County with the assistance of Florida Atlantic University and their research vessel. A twin reef was deployed at the mouth of the river in Oleta River State Park in Miami. Monitoring and maintenance of the sites is ongoing with semi-annual reports due to the Reef Ball Foundation and DERM (Department of Environmental Resource Management) of Miami-Dade County. A second goal of Project O.R.B. is aligned with the Florida Local Action Strategy, the Southeast Florida Coral Reef Initiative, and the U.S. Coral Reef Task Force, all of which point out the importance of awareness and education as key components to the health of our coral reefs. Project O.R.B. team members developed and published an activity book targeting elementary school students. Outreach events incorporate cascade learning where high school students teach elementary and middle school students about various aspects of coral reefs through interactive "edu-tainment" modules. Attendees learn about water sampling, salinity, beach erosion, surface runoff, water cycle, ocean zones, anatomy of coral, human impact on corals, and characteristics of a well-designed artificial reef. Middle school students snorkel on the artificial reef to witness first-hand the success of this artificial reef. Over 3,000 students have been reached through the educational outreach endeavors of Project O.R.B. This successful STEM project models the benefits of partnerships with universities, local K-12 public schools and community conservation organizations and provides students with authentic learning experiences. Students are able to have a positive impact on their local coral reef environment, their peers and their community through this comprehensive service-learning project.

Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys

USGS Publications Warehouse

Turk, Daniela; Yates, Kimberly K.; Vega-Rodriguez, Maria; Toro-Farmer, Gerardo; L'Esperance, Chris; Melo, Nelson; Ramsewak, Deanesch; Estrada, S. Cerdeira; Muller-Karger, Frank E.; Herwitz, Stan R.; McGillis, Wade

2016-01-01

Diurnal variation of net community production (NEP) and net community calcification (NEC) were measured in coral reef and seagrass biomes during October 2012 in the lower Florida Keys using a mesocosm enclosure and the oxygen gradient flux technique. Seagrass and coral reef sites showed diurnal variations of NEP and NEC, with positive values at near-seafloor light levels >100–300 µEinstein m-2 s-1. During daylight hours, we detected an average NEP of 12.3 and 8.6 mmol O2 m-2 h-1 at the seagrass and coral reef site, respectively. At night, NEP at the seagrass site was relatively constant, while on the coral reef, net respiration was highest immediately after dusk and decreased during the rest of the night. At the seagrass site, NEC values ranged from 0.20 g CaCO3 m-2 h-1 during daylight to -0.15 g CaCO3 m-2 h-1 at night, and from 0.17 to -0.10 g CaCO3 m-2 h-1 at the coral reef site. There were no significant differences in pH and aragonite saturation states (Ωar) between the seagrass and coral reef sites. Decrease in light levels during thunderstorms significantly decreased NEP, transforming the system from net autotrophic to net heterotrophic.

Density of Diadema antillarum (Echinodermata: Echinoidea) on live coral patch reefs and dead Acropora cervicornis rubble patches near Loggerhead Key, Dry Tortugas National Park, Florida, USA

EPA Science Inventory

Density of adult Diadema antillarum was assessed on live coral patch reefs and dead Acropora cervicornis rubble patches next to Loggerhead Key, Dry Tortugas National Park, Florida, USA in June 2009. Mean density on live coral patch reefs (0.49 individuals m-2) was not statistical...

Temporal dynamics of black band disease affecting pillar coral ( Dendrogyra cylindrus) following two consecutive hyperthermal events on the Florida Reef Tract

NASA Astrophysics Data System (ADS)

Lewis, Cynthia L.; Neely, Karen L.; Richardson, Laurie L.; Rodriguez-Lanetty, Mauricio

2017-06-01

Black band disease (BBD) affects many coral species worldwide and is considered a major contributor to the decline of reef-building coral. On the Florida Reef Tract BBD is most prevalent during summer and early fall when water temperatures exceed 29 °C. BBD is rarely reported in pillar coral ( Dendrogyra cylindrus) throughout the Caribbean, and here we document for the first time the appearance of the disease in this species on Florida reefs. The highest monthly BBD prevalence in the D. cylindrus population were 4.7% in 2014 and 6.8% in 2015. In each year, BBD appeared immediately following a hyperthermal bleaching event, which raises concern as hyperthermal seawater anomalies become more frequent.

Assessing the Diversity of Halimeda spp. on Pulley Ridge Mesophotic Reefs

NASA Astrophysics Data System (ADS)

Luzader, R. K.; Baco-Taylor, A.

2016-02-01

The Florida reef system contains an array of organisms that contribute to the development of the reef structure. These include calcifying green macroalgae of the genus Halimeda, which provides important ecosystem services by stabilizing the reefs through calcification. Halimeda is one of several groups of shallow water reef taxa with a depth range that extends into the mesophotic zone. It has been hypothesized the mesophotic reefs may serve as refugia for shallow water taxa impacted by climate change and other anthropogenic stressors. To test this hypothesis, in 2012-2015, the mesophotic reefs of Pulley Ridge and Dry Tortugas were sampled to assess genetic connectivity to the shallow water reefs of the Florida Keys. A diverse array of Halimeda species were represented on Pulley Ridge. Halimeda species are known to be difficult to identify and delineate morphologically and the taxonomy of Halimeda species has been revised several times based on molecular data. Thus, before connectivity of mesophotic Halimeda to shallow populations can be assessed, our first goal is to determine whether there is overlap of any of the Halimeda species between the mesophotic and shallow reefs, and then to determine if any of the species are present in sufficient abundance for population genetics. We sequenced portions of two chloroplast genes commonly used for algal phylogenetics and barcoding, tufA and rbcL, for at least 5 individuals of each morphotype collected on Dry Tortugas and the Pulley Ridge mesophotic reefs. Preliminary results suggest that Halimeda tuna, the species previously reported as the dominant Halimeda species on Pulley Ridge, was relatively uncommon. Morphological results and comparison of initial genetic results to sequences in GenBank suggest that H. goreaui is abundant at the Dry Tortugas site and H. fragilis, H. copiosa and H. discoidea are common on Pulley Ridge, indicating greater Halimeda diversity in the mesophotic reef system than previously documented.

Fine-scale environmental specialization of reef-building corals might be limiting reef recovery in the Florida Keys.

PubMed

Kenkel, Carly D; Almanza, Albert T; Matz, Mikhail V

2015-12-01

Despite decades of monitoring global reef decline, we are still largely unable to explain patterns of reef deterioration at local scales, which precludes the development of effective management strategies. Offshore reefs of the Florida Keys, USA, experience milder temperatures and lower nutrient loads in comparison to inshore reefs yet remain considerably more degraded than nearshore patch reefs. A year-long reciprocal transplant experiment of the mustard hill coral (Porites astreoides) involving four source and eight transplant locations reveals that corals adapt and/or acclimatize to their local habitat on a < 10-km scale. Surprisingly, transplantation to putatively similar environmental types (e.g., offshore corals moved to a novel offshore site, or along-shore transplantation) resulted in greater reductions in fitness proxies, such as coral growth, than cross-channel transplantation between inshore and offshore reefs. The only abiotic factor showing significantly greater differences between along-shore sites was daily temperature range extremes (rather than the absolute high or low temperatures reached), providing a possible explanation for this pattern. Offshore-origin corals exhibited significant growth reductions at sites with greater daily temperature ranges, which explained up to 39% of the variation in their mass gain. In contrast, daily temperature range explained at most 9% of growth variation in inshore-origin corals, suggesting that inshore corals are more tolerant of high-frequency temperature fluctuations. Finally, corals incur trade-offs when specializing to their native reef. Across reef locations the coefficient of selection against coral transplants was 0.07 ± 0.02 (mean ± SE). This selection against immigrants could hinder the ability of corals to recolonize devastated reefs, whether through assisted migration efforts or natural recruitment events, providing a unifying explanation for observed patterns of coral decline in this reef system.

Pleistocene corals of the Florida keys: Architects of imposing reefs - Why?

USGS Publications Warehouse

Lidz, B.H.

2006-01-01

Five asymmetrical, discontinuous, stratigraphically successive Pleistocene reef tracts rim the windward platform margin off the Florida Keys. Built of large head corals, the reefs are imposing in relief (???30 m high by 1 km wide), as measured from seismic profiles. Well dated to marine oxygen isotope substages 5c, 5b, and 5a, corals at depth are inferred to date to the Stage 6/5 transition. The size of these reefs attests to late Pleistocene conditions that repeatedly induced vigorous and sustained coral growth. In contrast, the setting today, linked to Florida Bay and the Gulf of Mexico, is generally deemed marginal for reef accretion. Incursion onto the reef tract of waters that contain seasonally inconsistent temperature, salinity, turbidity, and nutrient content impedes coral growth. Fluctuating sea level and consequent settings controlled deposition. The primary dynamic was position of eustatic zeniths relative to regional topographic elevations. Sea level during the past 150 ka reached a maximum of ???10.6 m higher than at present ???125 ka, which gave rise to an inland coral reef (Key Largo Limestone) and ooid complex (Miami Limestone) during isotope substage 5e. These formations now form the Florida Keys and a bedrock ridge beneath The Quicksands (Gulf of Mexico). High-precision radiometric ages and depths of dated corals indicate subsequent apices remained ???15 to 9 m, respectively, below present sea level. Those peaks provided accommodation space sufficient for vertical reef growth yet exposed a broad landmass landward of the reefs for >100 ka. With time, space, lack of bay waters, and protection from the Gulf of Mexico, corals thrived in clear oceanic waters of the Gulf Stream, the only waters to reach them.

Bioassessment Tools for Stony Corals: Statistical Evaluation of Candidate Metrics in the Florida Keys

EPA Science Inventory

Measurements of coral reef condition were collected from stations in the Florida Keys National Marine Sanctuary and Dry Tortugas National Park during 2003-04. Four assessment endpoints of reef condition were derived from transect censuses and measurements of stony corals: total s...

THE IMPACT OF CDOM PHOTOBLEACHING ON UV ATTENUATION NEAR CORAL REEFS IN THE FLORIDA KEYS

EPA Science Inventory

We have investigated how the loss of chromophoric dissolved organic matter (CDOM) in the water column due to photobleaching allows for increased penetration of UV radiation near coral reefs in the Florida Keys. Extended exposure to UV may contribute to coral bleaching episodes. C...

Development of Ocean Acidification Flow-Thru Experimental Raceway Units (OAFTERU): Simulating the Future Reefs in the Keys Today

NASA Astrophysics Data System (ADS)

Hall, E. R.; Vaughan, D.; Crosby, M. P.

2011-12-01

Ocean acidification, a consequence of anthropogenic CO2 production due to fossil fuel combustion, deforestation, and cement production, has been referred to as "the other CO2 problem" and is receiving much attention in marine science and public policy communities. Critical needs that have been identified by top climate change and marine scientists include using projected pCO2 (partial pressure of CO2 in seawater) levels in manipulative experiments to determine physiological indices of ecologically important species, such as corals. Coral reefs were one of the first ecosystems to be documented as susceptible to ocean acidification. The Florida Keys reef system has already experienced a long-term deterioration, resulting in increased calls for large scale coral reef ecosystem restoration of these critical resources. It has also been speculated that this decline in reef ecosystem health may be exacerbated by increasing atmospheric CO2 levels with resulting ocean acidification. Therefore, reef resilience to ocean acidification and the potential for successful restoration of these systems under forecasted long-term modified pH conditions in the Florida Keys is of great concern. Many studies for testing effects of ocean acidification on corals have already been established and tested. However, many employ pH modification experimental designs that include addition of acid to seawater which may not mimic conditions of climate change induced ocean acidification. It would be beneficial to develop and maintain an ocean acidification testing system more representative of climate change induced changes, and specific to organisms and ecosystems indigenous to the Florida Keys reef tract. The Mote Marine Laboratory research facility in Summerland Key, FL has an established deep well from which its supply of seawater is obtained. This unique source of seawater is 80 feet deep, "fossil" marine water. It is pumped from the on-site aquifer aerated to reduce H2S and ammonia, and passed through filters for biofiltration, and clarification. The resulting water has a pH that is relatively acidic (pH around 7.6, pCO2 ranging from 200 to 2000 μatm). However, further aeration will adjust the pH of the water, by driving off more CO2, yielding pH levels at varying levels between 7.6 and present day values (>8.0-8.4). We are currently testing methods for utilizing this unique seawater system as the foundation for manipulative ocean acidification studies with Florida Keys corals and other reef ecosystem species in both flow-through and large mesocosm-based designs. Advance knowledge of potential climate-driven trends in coral growth and health will permit improved modeling for prediction and more effectively guide policy decisions for how financial resources should be directed to protection and restoration of coral reef ecosystems. Developing such longterm research infrastructure at the existing Mote Marine Laboratory Summerland Key facility will provide an optimum global research center for examining and modeling effects of ocean acidification on corals as well as other important estuarine and marine species.

Environmental quality and preservation; reefs, corals, and carbonate sands; guides to reef-ecosystem health and environment

USGS Publications Warehouse

Lidz, Barbara H.

2001-01-01

Introduction In recent years, the health of the entire coral reef ecosystem that lines the outer shelf off the Florida Keys has declined markedly. In particular, loss of those coral species that are the building blocks of solid reef framework has significant negative implications for economic vitality of the region. What are the reasons for this decline? Is it due to natural change, or are human activities (recreational diving, ship groundings, farmland runoff, nutrient influx, air-borne contaminants, groundwater pollutants) a contributing factor and if so, to what extent? At risk of loss are biologic resources of the reefs, including habitats for endangered species in shoreline mangroves, productive marine and wetland nurseries, and economic fisheries. A healthy reef ecosystem builds a protective offshore barrier to catastrophic wave action and storm surges generated by tropical storms and hurricanes. In turn, a healthy reef protects the homes, marinas, and infrastructure on the Florida Keys that have been designed to capture a lucrative tourism industry. A healthy reef ecosystem also protects inland agricultural and livestock areas of South Florida whose produce and meat feed much of the United States and other parts of the world. In cooperation with the National Oceanic and Atmospheric Administration's (NOAA) National Marine Sanctuary Program, the U.S. Geological Survey (USGS) continues longterm investigations of factors that may affect Florida's reefs. One of the first steps in distinguishing between natural change and the effects of human activities, however, is to determine how coral reefs have responded to past environmental change, before the advent of man. By so doing, accurate scientific information becomes available for Marine Sanctuary management to understand natural change and thus to assess and regulate potential human impact better. The USGS studies described here evaluate the distribution (location) and historic vitality (thickness) of Holocene reefs in South Florida, relative to type of underlying bedrock morphology, and their varied natural response to rising sea level. These studies also assess movement and accumulation of sands, relative to direction of prevailing energy, and origin of the component sand grains. Geophysical data collected with highresolution sound-wave instruments that provide pictures of the sediment and bedrock are used to interpret sediment thickness. Reef thickness is determined by collecting limestone rock cores by drilling. Drill cores through reefs are used to identify the coral species that built them and to determine how reefs reacted to rising sea level. These data are supplemented by using isotope-dating techniques to derive the carbon-14 (C14) age of the corals and mangrove peat in the cores. Mangrove peat forms in very shallow water and at the shoreline but is found today buried beneath offshore reefs.

Determining the Extent and Characterizing Coral Reef Habitats of the Northern Latitudes of the Florida Reef Tract (Martin County)

PubMed Central

Walker, Brian K.; Gilliam, David S.

2013-01-01

Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25–27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km2 seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and range expansion investigations. PMID:24282542

Determining the extent and characterizing coral reef habitats of the northern latitudes of the Florida Reef Tract (Martin County).

PubMed

Walker, Brian K; Gilliam, David S

2013-01-01

Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25-27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km(2) seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and range expansion investigations.

Possible return of Acropora cervicornis at Pulaski Shoal, Dry Tortugas National Park, Florida

USGS Publications Warehouse

Lidz, Barbara H.; Zawada, David G.

2013-01-01

Seabed classification is essential to assessing environmental associations and physical status in coral reef ecosystems. At Pulaski Shoal in Dry Tortugas National Park, Florida, nearly continuous underwater-image coverage was acquired in 15.5 hours in 2009 along 70.2 km of transect lines spanning ~0.2 km2. The Along-Track Reef-Imaging System (ATRIS), a boat-based, high-speed, digital imaging system, was used. ATRIS-derived benthic classes were merged with a QuickBird satellite image to create a habitat map that defines areas of senile coral reef, carbonate sand, seagrasses, and coral rubble. This atypical approach of starting with extensive, high-resolution in situ imagery and extrapolating between transect lines using satellite imagery leverages the strengths of each remote-sensing modality. The ATRIS images also captured the spatial distribution of two species once common on now-degraded Florida-Caribbean coral reefs: the stony staghorn coral Acropora cervicornis, a designated threatened species, and the long-spined urchin Diadema antillarum. This article documents the utility of ATRIS imagery for quantifying number and estimating age of A. cervicornis colonies (n = 400, age range, 5–11 y) since the severe hypothermic die-off in the Dry Tortugas in 1976–77. This study is also the first to document the largest number of new colonies of A. cervicornis tabulated in an area of the park where coral-monitoring stations maintained by the Fish and Wildlife Research Institute have not been established. The elevated numbers provide an updated baseline for tracking revival of this species at Pulaski Shoal.

Proceedings of the SERDP Coral Reef Monitoring and Assessment Workshop

DTIC Science & Technology

2009-12-01

the U.S. that have coral reefs within their jurisdictions. Biscayne National Park, the Dry Tortugas , and U.S. Virgin Island parks at St. John and...Signs Monitoring Networks Dry Tortugas NP Buck Island Reef NM Virgin Islands National Park Biscayne NP South Florida/Caribbean Network Florida/Caribbean...Buck Island, Dry Tortugas and Biscayne • Extensive sites – 4 10m permanent transects per site – 18 sites in DRTO Virgin Islands NP % l i v e c o r

TEMPORAL TRENDS IN THE HEALTH OF SOUTH FLORIDA CORAL REEFS

EPA Science Inventory

Barron, M.G., D.L. Santavy, L. MacLaughlin, E. Mueller, E. Peters, B. Quarles and J. Campbell. In press. Temporal Trends in the Health of South Florida Coral Reefs (Abstract). To be presented at the SETAC Fourth World Congress, 14-18 November 2004, Portland, OR. 1 p. (ERL,GB R100...

UTILIZING SHELLFISH RESPONSES TO SET TARGET WATER QUALITY CONDITIONS FOR THE RESTORATION OF OYSTER REEFS IN THE CALOOSAHATCHEE ESTUARY, FLORIDA.

EPA Science Inventory

Volety, Aswani K., S.G. Tolley and James T. Winstead. 2002. Utilizing Shellfish Responses to Set Target Water Quality Conditions for the Restoration of Oyster Reefs in the Caloosahatchee Estuary, Florida. Presented at the International Workshop on Restoration of Benthic Invertebr...

INFLUENCE OF SALINITY ON HABITAT UTILIZATION OF OYSTER REEFS BY RESIDENT FISHES AND DECAPOD CRUSTACEANS IN THE CALOOSAHATCHEE ESTUARY, FLORIDA.

EPA Science Inventory

A spatiotemporal comparison of habitat suitability of oyster reefs for fishes and decapod crustaceans was conducted for the lower Caloosahatchee Estuary, Florida. Lift nets (1-m2) containing 5 liters (volume displacement) of oyster clusters were deployed monthly at three sites al...

Rapid Recent Warming of Coral Reefs in the Florida Keys.

PubMed

Manzello, Derek P

2015-11-16

Coral reef decline in the Florida Keys has been well-publicized, controversial, and polarizing owing to debate over the causative agent being climate change versus overfishing. The recurrence of mass bleaching in 2014, the sixth event since 1987, prompted a reanalysis of temperature data. The summer and winter of 2014 were the warmest on record. The oldest known in-situ temperature record of any coral reef is from Hens and Chickens Reef (H&C) in the Florida Keys, which showed significant warming from 1975-2014. The average number of days ≥31.5 and 32(o)C per year increased 2670% and 2560%, respectively, from the mid-1990 s to present relative to the previous 20 years. In every year after 1992 and 1994, maximum daily average temperatures exceeded 30.5 and 31°C, respectively. From 1975-1994, temperatures were <31 °C in 61% of years, and in 44% of the years prior to 1992 temperatures were <30.5 °C. The measured rate of warming predicts the start of annual bleaching between 2020 and 2034, sooner than expected from climate models and satellite-based sea temperatures. These data show that thermal stress is increasing and occurring on a near-annual basis on Florida Keys reefs due to ocean warming from climate change.

Geology and hydrogeology of the Florida Keys

USGS Publications Warehouse

Halley, Robert B.; Vacher, H. L.; Shinn,

1997-01-01

This chapter discusses the geology and hydrogeology of the Florida Keys, and focuses on the islands formed of Pleistocene limestone. These islands, which are crossed when driving from Miami to Key West, are typically regarded as "the Florida Keys." The outstanding and fragile character of ecosystems on and around the Florida Keys has prompted State and Federal efforts to protect and preserve the remaining public portions of the region. The Florida Keys were largely ignored during the sixteenth, seventeenth, and eighteenth centuries, although the waters just offshore provided a major shipping thoroughfare to and from the New World. The Florida Keys are now recognized as one of the great recreational and environmental resources of the United States. The islands are outposts of a laid-back, tropical resort culture that has as its foundation warmth and clear water. A significant part of the attraction is fishing, diving, and boating around the area's coral reefs, which the islands protect. But the reefs were not always so highly valued. The Florida Keys that have protected the reefs for millennia, may now be the source of the agents that may accomplish what Agassiz thought was beyond man's power a century ago.

Habitat, Fauna, and Conservation of Florida's Deep-Water Coral Reefs

NASA Astrophysics Data System (ADS)

Reed, J. K.; Pomponi, S. A.; Messing, C. G.; Brooke, S.

2008-05-01

Various types of deep-water coral habitats are common off the southeastern United States from the Blake Plateau through the Straits of Florida to the eastern Gulf of Mexico. Expeditions in the past decade with the Johnson-Sea- Link manned submersibles, ROVs, and AUVs have discovered, mapped and compiled data on the status, distribution, habitat, and biodiversity for many of these relatively unknown deep-sea coral ecosystems. We have discovered over three hundred, high relief (15-152-m tall) coral mounds (depth 700-800 m) along the length of eastern Florida (700 km). The north Florida sites are rocky lithoherms, whereas the southern sites are primarily classic coral bioherms, capped with dense 1-2 m tall thickets of Lophelia pertusa and Enallopsammia profunda. Off southeastern Florida, the Miami Terrace escarpment (depth 300-600 m) extends nearly 150 km as a steep, rocky slope of Miocene-age phosphoritic limestone, which provides habitat for a rich biodiversity of fish and benthic invertebrates. Off the Florida Keys, the Pourtalès Terrace (depth 200- 460 m) has extensive high-relief bioherms and numerous deep-water sinkholes to depths of 250-610 m and diameters up to 800 m. The dominant, deep-water, colonial scleractinian corals in this region include Oculina varicosa, L. pertusa, E. profunda, Madrepora oculata, and Solenosmilia variabilis. Other coral species include hydrozoans (Stylasteridae), bamboo octocorals (Isididae), numerous other gorgonians, and black corals (Antipatharia). These structure-forming taxa provide habitat and living space for a relatively unknown but biologically rich and diverse community of crustaceans, mollusks, echinoderms, polychaete and sipunculan worms, and associated fishes. We have identified 142 taxa of benthic macro-invertebrates, including 66 Porifera and 57 Cnidaria. Nearly 100 species of fish have been identified to date in association with these deep-water coral habitats. Paull et al. (2000) estimated that over 40,000 individual deep-water lithoherms may occur on the Blake Plateau and Straits of Florida, perhaps exceeding the areal extent of all the shallow-water reefs of the southeastern U.S. Our research program has provided data on the status of knowledge concerning these deep-reef habitats to the South Atlantic Fishery Management Council (SAFMC). Currently pending is a proposal by the SAFMC for a deep- water coral Habitat Area of Particular Concern (HAPC) that would extend from North Carolina to south Florida (78,888 km2) to protect these diverse and irreplaceable resources from destructive fishing activities such as bottom trawling. Deep-water reefs worldwide have been severely impacted by bottom trawling, including the deep-water Oculina coral reefs off central eastern Florida, which are structurally similar to the Lophelia reefs. Over a 30-year period, up to 99% of unprotected portions of the Oculina reefs were destroyed by rock shrimp trawling, whereas reefs designated as the Oculina HAPC in 1984 were protected from trawling and long-lines and are still relatively healthy. Numerous fisheries may target the deep-water Lophelia reef habitat including royal red shrimp, golden crab, and various fin fish.

Coral reef complexes at an atypical windward platform margin: Late Quaternary, southeast Florida

USGS Publications Warehouse

Lidz, B.H.

2004-01-01

Major coral reef complexes rim many modern and ancient carbonate platforms. Their role in margin evolution is not fully understood, particularly when they border a margin atypical of the classic model. Classic windward margins are steeply inclined. The windward margin of southeast Florida is distinct with a very low-gradient slope and a shelf edge ringed with 30-m-high Quaternary outlier reefs on a shallow upper-slope terrace. A newly developed synthesis of temporally well-constrained geologic events is used with surface and subsurface seismic-reflection contours to construct morphogenetic models of four discontinuous reef-complex sequences. The models show uneven subsurface topography, upward and landward buildups, and a previously unreported, rapid, Holocene progradation. The terms backstepped reef-complex margin, backfilled prograded margin, and coalesced reef-complex margin are proposed for sections exhibiting suitable signatures in the stratigraphic record. The models have significant implications for interpretation of ancient analogues. The Florida record chronicles four kinds of geologic events. (1) Thirteen transgressions high enough for marine deposition occurred between ca. 325 ka and the present. Six gave rise to stratigraphically successive coral reef complexes between ca. 185 and ca. 77.8 ka. The seventh reef ecosystem is Holocene. (2) Two primary coral reef architectures built the outer shelf and margin, producing respective ridge-and-swale and reef-and-trough geometries of very different scales. (3) Massive outlier reefs developed on an upper-slope terrace between ca. 106.5 and ca. 80 ka and are inferred to contain corals that would date to highstands at ca. 140 and 125 ka. (4) Sea level remained below elevation of the shelf between ca. 77.8 and ca. 9.6 ka. ?? 2004 Geological Society of America.

New maps, new information: Coral reefs of the Florida keys

USGS Publications Warehouse

Lidz, B.H.; Reich, C.D.; Peterson, R.L.; Shinn, E.A.

2006-01-01

A highly detailed digitized map depicts 22 benthic habitats in 3140.5 km2 of the Florida Keys National Marine Sanctuary. Dominant are a seagrass/lime-mud zone (map area 27.5%) throughout Hawk Channel and seagrass/carbonate-sand (18.7%) and bare carbonate-sand (17.3%) zones on the outer shelf and in The Quicksands. A lime-mud/seagrass-covered muddy carbonate-sand zone (9.6%) abuts the keys. Hardbottom communities (13.2%) consist of bare Pleistocene coralline and oolitic limestone, coral rubble, and senile coral reefs. Smaller terrestrial (4.0%) and marine habitats, including those of live coral (patch reefs, 0.7%), account for the rest (13.7%) of the area. Derived from aerial photomosaics, the seabed dataset fits precisely when transposed onto a newly developed National Geophysical Data Center hydrographic-bathymetry map. Combined, the maps point to new information on unstudied seabed morphologies, among them an erosional nearshore rock ledge bordering the seaward side of the Florida Keys and thousands of patch-reef clusters aligned in mid-Hawk Channel. Preliminary indications are that the ledge may represent the seaward extent of the 125-ka Key Largo and Miami Limestone that form the keys, and the patch reefs colonized landward edges of two noncoralline, non-dune-ridge topographic troughs. The troughs, their substrate, and inner-shelf location along the seaward side of the Hawk Channel bedrock depression are the first of that type of nuclei to be recognized in the Florida reef record. Together, the map datasets establish the efficacy and accuracy of using aerial photographs to define in extraordinary detail the seabed features and habitats in a shallow-reef setting.

Protection of fish spawning habitat for the conservation of warm temperate reef fish fisheries of shelf-edge reefs of Florida

USGS Publications Warehouse

Koenig, Christopher C.; Coleman, Felicia C.; Grimes, Churchill B.; Fitzhugh, Gary R.; Scanlon, Kathryn M.; Gledhill, Christopher T.; Grace, Mark

2000-01-01

We mapped and briefly describe the surficial geology of selected examples of shelfedge reefs (50–120 m deep) of the southeastern United States, which are apparently derived from ancient Pleistocene shorelines and are intermittently distributed throughout the region. These reefs are ecologically significant because they support a diverse array of fish and invertebrate species, and they are the only aggregation spawning sites of gag (Mycteroperca microlepis), scamp (M. phenax), and other economically important reef fish. Our studies on the east Florida shelf in the Experimental Oculina Research Reserve show that extensive damage to the habitat-structuring coral Oculina varicosa has occurred in the past, apparently from trawling and dredging activities of the 1970s and later. On damaged or destroyed Oculina habitat, reef-fish abundance and diversity are low, whereas on intact habitat, reef-fish diversity is relatively high compared to historical diversity on the same site. The abundance and biomass of the economically important reef fish was much higher in the past than it is now, and spawning aggregations of gag and scamp have been lost or greatly reduced in size. On the west Florida shelf, fishers have concentrated on shelf-edge habitats for over 100 yrs, but fishing intensity increased dramatically in the 1980s. Those reefs are characterized by low abundance of economically important species. The degree and extent of habitat damage there is unknown. We recommend marine fishery reserves to protect habitat and for use in experimentally examining the potential production of unfished communities.

Protection of fish spawning habitat for the conservation of warm-temperature reef-fish fisheries of shelf-edge reefs of Florida

USGS Publications Warehouse

Koenig, Christopher C.; Coleman, Felicia C.; Grimes, Churchill B.; Fitzhugh, Gary R.; Scanlon, Kathryn M.; Gledhill, Christopher T.; Grace, Mark

2000-01-01

We mapped and briefly describe the surficial geology of selected examples of shelf-edge reefs (50–120 m deep) of the southeastern United States, which are apparently derived from ancient Pleistocene shorelines and are intermittently distributed throughout the region. These reefs are ecologically significant because they support a diverse array of fish and invertebrate species, and they are the only aggregation spawning sites of gag (Mycteroperca microlepis), scamp (M. phenax), and other economically important reef fish. Our studies on the east Florida shelf in the Experimental Oculina Research Reserve show that extensive damage to the habitat-structuring coral Oculina varicosa has occurred in the past, apparently from trawling and dredging activities of the 1970s and later. On damaged or destroyed Oculina habitat, reef-fish abundance and diversity are low, whereas on intact habitat, reef-fish diversity is relatively high compared to historical diversity on the same site. The abundance and biomass of the economically important reef fish was much higher in the past than it is now, and spawning aggregations of gag and scamp have been lost or greatly reduced in size. On the west Florida shelf, fishers have concentrated on shelf-edge habitats for over 100 yrs, but fishing intensity increased dramatically in the 1980s. Those reefs are characterized by low abundance of economically important species. The degree and extent of habitat damage there is unknown. We recommend marine fishery reserves to protect habitat and for use in experimentally examining the potential production of unfished communities.

Strange bedfellows - A deep-water hermatypic coral reef superimposed on a drowned barrier island; Southern Pulley Ridge, SW Florida platform margin

USGS Publications Warehouse

Jarrett, B.D.; Hine, A.C.; Halley, R.B.; Naar, D.F.; Locker, S.D.; Neumann, A.C.; Twichell, D.; Hu, C.; Donahue, B.T.; Jaap, W.C.; Palandro, D.; Ciembronowicz, K.

2005-01-01

The southeastern component of a subtle ridge feature extending over 200 km along the western ramped margin of the south Florida platform, known as Pulley Ridge, is composed largely of a non-reefal, coastal marine deposit. Modern biostromal reef growth caps southern Pulley Ridge (SPR), making it the deepest hermatypic reef known in American waters. Subsurface ridge strata are layered, lithified, and display a barrier island geomorphology. The deep-water reef community is dominated by platy scleractinian corals, leafy green algae, and coralline algae. Up to 60% live coral cover is observed in 60-75 m of water, although only 1-2% of surface light is available to the reef community. Vertical reef accumulation is thin and did not accompany initial ridge submergence during the most recent sea-level rise. The delayed onset of reef growth likely resulted from several factors influencing Gulf waters during early stages of the last deglaciation (???14 kyr B.P.) including; cold, low-salinity waters derived from discrete meltwater pulses, high-frequency sea-level fluctuations, and the absence of modern oceanic circulation patterns. Currently, reef growth is supported by the Loop Current, the prevailing western boundary current that impinges upon the southwest Florida platform, providing warm, clear, low-nutrient waters to SPR. The rare discovery of a preserved non-reefal lowstand shoreline capped by rich hermatypic deep-reef growth on a tectonically stable continental shelf is significant for both accurate identification of late Quaternary sea-level position and in better constraining controls on the depth limits of hermatypic reefs and their capacity for adaptation to extremely low light levels. ?? 2004 Elsevier B.V. All rights reserved.

78 FR 16296 - Record of Decision for the Coral Reef Restoration Plan, Biscayne National Park, FL

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-14

...] Record of Decision for the Coral Reef Restoration Plan, Biscayne National Park, FL AGENCY: National Park... Record of Decision (ROD) for the Coral Reef Restoration Plan (Plan) for Biscayne National Park, Florida... Biscayne National Park, causing injuries to submerged resources. The goal of coral reef restoration actions...

Fragment generation, survival, and attachment of Dictyota spp. at Conch Reef in the Florida Keys, USA

NASA Astrophysics Data System (ADS)

Herren, L. W.; Walters, L. J.; Beach, K. S.

2006-05-01

During the past decade, the relative abundance of the brown macroalgae Dictyota spp. has been high in the Florida Keys. Recent studies have shown that members of this genus successfully reproduce via vegetative fragmentation. To investigate the importance of fragmentation on the reef community, this study examined: (1) the degree of epiphytism on benthic organisms, (2) the rate of fragment production through fish foraging activities, (3) the likelihood of fragment entanglement, and (4) the fragment attachment and success rate. It was found that reef fish contributed substantially to the fragment pool; furthermore, most fish-produced fragments produced rhizoids and attached to sand grains within 24 h in the field. Fragments of Dictyota spp. most commonly became entangled around and then attached themselves to the green alga Halimeda tuna, and other Dictyota spp. These results suggest that vegetative fragmentation of Dictyota spp. plays an important role in the changing community structure on the Florida Keys reef tract.

Environmental Variability in the Florida Keys: Impacts on Coral Reef Resilience and Health

NASA Astrophysics Data System (ADS)

Soto, I. M.; Muller-Karger, F. E.

2005-12-01

Environmental variability contributes to both mass mortality and resilience in tropical coral reef communities. We assess variations in sea surface temperature (SST) and ocean color in the Florida Keys using satellite imagery, and provide insight into how this variability is associated with locations of resilient coral communities (those unaffected by or able to recover from major events). The project tests the hypothesis that areas with historically low environmental variability promote lower levels of coral reef resilience. Time series of SST from the Advanced Very High Resolution Radiometer (AVHRR) sensors and ocean color derived quantities (e.g., turbidity and chlorophyll) from the Sea-viewing Wide Field of View Sensor (SeaWiFS) are being constructed over the entire Florida Keys region for a period of twelve and nine years, respectively. These data will be compared with historical coral cover data derived from Landsat imagery (1984-2002). Improved understanding of the causes of coral reef decline or resilience will help protect and manage these natural treasures.

Species-specific responses to climate change and community composition determine future calcification rates of Florida Keys reefs.

PubMed

Okazaki, Remy R; Towle, Erica K; van Hooidonk, Ruben; Mor, Carolina; Winter, Rivah N; Piggot, Alan M; Cunning, Ross; Baker, Andrew C; Klaus, James S; Swart, Peter K; Langdon, Chris

2017-03-01

Anthropogenic climate change compromises reef growth as a result of increasing temperatures and ocean acidification. Scleractinian corals vary in their sensitivity to these variables, suggesting species composition will influence how reef communities respond to future climate change. Because data are lacking for many species, most studies that model future reef growth rely on uniform scleractinian calcification sensitivities to temperature and ocean acidification. To address this knowledge gap, calcification of twelve common and understudied Caribbean coral species was measured for two months under crossed temperatures (27, 30.3 °C) and CO 2 partial pressures (pCO 2 ) (400, 900, 1300 μatm). Mixed-effects models of calcification for each species were then used to project community-level scleractinian calcification using Florida Keys reef composition data and IPCC AR5 ensemble climate model data. Three of the four most abundant species, Orbicella faveolata, Montastraea cavernosa, and Porites astreoides, had negative calcification responses to both elevated temperature and pCO 2 . In the business-as-usual CO 2 emissions scenario, reefs with high abundances of these species had projected end-of-century declines in scleractinian calcification of >50% relative to present-day rates. Siderastrea siderea, the other most common species, was insensitive to both temperature and pCO 2 within the levels tested here. Reefs dominated by this species had the most stable end-of-century growth. Under more optimistic scenarios of reduced CO 2 emissions, calcification rates throughout the Florida Keys declined <20% by 2100. Under the most extreme emissions scenario, projected declines were highly variable among reefs, ranging 10-100%. Without considering bleaching, reef growth will likely decline on most reefs, especially where resistant species like S. siderea are not already dominant. This study demonstrates how species composition influences reef community responses to climate change and how reduced CO 2 emissions can limit future declines in reef calcification. © 2016 John Wiley & Sons Ltd.

Ocean Acidification Refugia of the Florida Reef Tract

NASA Astrophysics Data System (ADS)

Manzello, D.; Enochs, I.; Melo, N.; Gledhill, D. K.; Johns, E. M.

2012-12-01

Ocean acidification (OA) is expected to reduce the calcification rates of marine organisms, yet we have little understanding of how OA will manifest within dynamic, real-world systems. Natural CO2, alkalinity, and salinity gradients can significantly alter local carbonate chemistry, and thereby create a range of susceptibility for different ecosystems to OA. As such, there is a need to characterize this natural variability of seawater carbonate chemistry, especially within coastal ecosystems. Since 2009, carbonate chemistry data have been collected on the Florida Reef Tract (FRT). During periods of heightened productivity, there is a net uptake of total CO2 (TCO2) which increases aragonite saturation state (Ωarag) values on inshore patch reefs of the upper FRT. These waters can exhibit greater Ωarag than what has been modeled for the tropical surface ocean during preindustrial times, with mean (± std. error) Ωarag-values in spring = 4.69 (± 0.101). Conversely, Ωarag-values on offshore reefs generally represent oceanic carbonate chemistries consistent with present day tropical surface ocean conditions. This gradient is opposite from what has been reported for other reef environments. We hypothesize this pattern is caused by the photosynthetic uptake of TCO2 mainly by seagrasses and, to a lesser extent, macroalgae in the inshore waters of the FRT. These inshore reef habitats are therefore potential acidification refugia that are defined not only in a spatial sense, but also in time; coinciding with seasonal productivity dynamics. Coral reefs located within or immediately downstream of seagrass beds may find refuge from OA.

Ocean Acidification Refugia of the Florida Reef Tract

PubMed Central

Manzello, Derek P.; Enochs, Ian C.; Melo, Nelson; Gledhill, Dwight K.; Johns, Elizabeth M.

2012-01-01

Ocean acidification (OA) is expected to reduce the calcification rates of marine organisms, yet we have little understanding of how OA will manifest within dynamic, real-world systems. Natural CO2, alkalinity, and salinity gradients can significantly alter local carbonate chemistry, and thereby create a range of susceptibility for different ecosystems to OA. As such, there is a need to characterize this natural variability of seawater carbonate chemistry, especially within coastal ecosystems. Since 2009, carbonate chemistry data have been collected on the Florida Reef Tract (FRT). During periods of heightened productivity, there is a net uptake of total CO2 (TCO2) which increases aragonite saturation state (Ωarag) values on inshore patch reefs of the upper FRT. These waters can exhibit greater Ωarag than what has been modeled for the tropical surface ocean during preindustrial times, with mean (± std. error) Ωarag-values in spring = 4.69 (±0.101). Conversely, Ωarag-values on offshore reefs generally represent oceanic carbonate chemistries consistent with present day tropical surface ocean conditions. This gradient is opposite from what has been reported for other reef environments. We hypothesize this pattern is caused by the photosynthetic uptake of TCO2 mainly by seagrasses and, to a lesser extent, macroalgae in the inshore waters of the FRT. These inshore reef habitats are therefore potential acidification refugia that are defined not only in a spatial sense, but also in time; coinciding with seasonal productivity dynamics. Coral reefs located within or immediately downstream of seagrass beds may find refuge from OA. PMID:22848575

Ocean acidification refugia of the Florida Reef Tract.

PubMed

Manzello, Derek P; Enochs, Ian C; Melo, Nelson; Gledhill, Dwight K; Johns, Elizabeth M

2012-01-01

Ocean acidification (OA) is expected to reduce the calcification rates of marine organisms, yet we have little understanding of how OA will manifest within dynamic, real-world systems. Natural CO(2), alkalinity, and salinity gradients can significantly alter local carbonate chemistry, and thereby create a range of susceptibility for different ecosystems to OA. As such, there is a need to characterize this natural variability of seawater carbonate chemistry, especially within coastal ecosystems. Since 2009, carbonate chemistry data have been collected on the Florida Reef Tract (FRT). During periods of heightened productivity, there is a net uptake of total CO(2) (TCO(2)) which increases aragonite saturation state (Ω(arag)) values on inshore patch reefs of the upper FRT. These waters can exhibit greater Ω(arag) than what has been modeled for the tropical surface ocean during preindustrial times, with mean (± std. error) Ω(arag)-values in spring = 4.69 (±0.101). Conversely, Ω(arag)-values on offshore reefs generally represent oceanic carbonate chemistries consistent with present day tropical surface ocean conditions. This gradient is opposite from what has been reported for other reef environments. We hypothesize this pattern is caused by the photosynthetic uptake of TCO(2) mainly by seagrasses and, to a lesser extent, macroalgae in the inshore waters of the FRT. These inshore reef habitats are therefore potential acidification refugia that are defined not only in a spatial sense, but also in time; coinciding with seasonal productivity dynamics. Coral reefs located within or immediately downstream of seagrass beds may find refuge from OA.

Chitons (Mollusca, Polyplacophora) from Alacranes Reef, Yucatan, Mexico

PubMed Central

Reyes-Gómez, Adriana; Ortigosa, Deneb; Simões, Nuno

2017-01-01

Abstract This study represents the first comprehensive chiton study from Alacranes Reef, the largest reef system in the Gulf of Mexico. Nine chiton species were found in seven localities within the area, in the intertidal and subtidal to 12 m depth. SEM examination of C. janeirensis, A. hemphilli, T. schrammi and C. floridanus, showed variations in the sculpture and radular teeth morphology when compared to specimens of the same species from Florida Keys, Bahamas and Puerto Rico. The distribution ranges of T. schrammi, L. liozonis and S. floridana are extended into the south-western area of the Gulf of Mexico. Altogether, combining previous literature and the present survey, reports eleven chiton species which have now been recorded within the Alacranes reef area. PMID:28769624

Coral reef recovery in Florida and the Persian Gulf

USGS Publications Warehouse

Shinn, Eugene A.

1976-01-01

Long-term observations and study of coral reef destruction by hurricanes in the Florida Keys show, surprisingly, that although corals are devastated on a grand scale during storms, recovery is rapid. Recovery occurs because of the widespread scattering of live fragments, many of which become growth sites of new colonies. Reef recovery from death by chilling in the Persian Gulf was well under way when last observed, but it is not yet known if the recovery rate was as rapid as recovery from the storm destruction in Florida. Recovery from death by chilling requires settlement of transported coral larvae and a substrate suitable for larval attachment. Such resettlement is subject to the effects of currents, predators, pollution, and competition for substrate. A growth rate of 10 cm per year combined with geometrical progression of branch formation accounts for rapid recovery. Although calculated coral proliferation seems unusually high, it has been confirmed by serial underwater photographs spanning ten years. More precise measurements of growth and branching are needed, along with growth data for other common reef-building corals. Such data would be useful for predicting standing crop of a restocked or transplanted reef.

Geospatial characteristics of Florida's coastal and offshore environments: Coastal habitats, artificial reefs, wrecks, dumping grounds, harbor obstructions and offshore sand resources

USGS Publications Warehouse

Demopoulos, Amanda W.J.; Foster, Ann M.; Jones, Michal L.; Gualtieri, Daniel J.

2011-01-01

The Geospatial Characteristics GeoPDF of Florida's Coastal and Offshore Environments is a comprehensive collection of geospatial data describing the political boundaries and natural resources of Florida. This interactive map provides spatial information on bathymetry, sand resources, coastal habitats, artificial reefs, shipwrecks, dumping grounds, and harbor obstructions. The map should be useful to coastal resource managers and others interested in marine habitats and submerged obstructions of Florida's coastal region. In particular, as oil and gas explorations continue to expand, the map may be used to explore information regarding sensitive areas and resources in the State of Florida. Users of this geospatial database will have access to synthesized information in a variety of scientific disciplines concerning Florida's coastal zone. This powerful tool provides a one-stop assembly of data that can be tailored to fit the needs of many natural resource managers. The map was originally developed to assist the Bureau of Ocean Energy Management, Regulation, and Enforcement (BOEMRE) and coastal resources managers with planning beach restoration projects. The BOEMRE uses a systematic approach in planning the development of submerged lands of the Continental Shelf seaward of Florida's territorial waters. Such development could affect the environment. BOEMRE is required to ascertain the existing physical, biological, and socioeconomic conditions of the submerged lands and estimate the impact of developing these lands. Data sources included the National Oceanic and Atmospheric Administration, BOEMRE, Florida Department of Environmental Protection, Florida Geographic Data Library, Florida Fish and Wildlife Conservation Commission, Florida Natural Areas Inventory, and the State of Florida, Bureau of Archeological Research. Federal Geographic Data Committee (FGDC) compliant metadata are provided as attached xml files for all geographic information system (GIS) layers.

Phage therapy for Florida corals?

USGS Publications Warehouse

Kellogg, Christina A.

2007-01-01

Coral disease is a major cause of reef decline in the Florida Keys. Bacterium has been defined as the most common pathogen (disease-causing organism). Although much is being done to catalog coral diseases, map their locations, determine the causes of disease, or measure the rates of coral demise, very little research has been directed toward actually preventing or eliminating the diseases affecting coral and coral reef decline.

Theater Missile Defense Extended Test Range Supplemental Environmental Impact Statement - Eglin Gulf Test Range. Volume 2

DTIC Science & Technology

1998-07-01

potential sites including those in the Florida Keys. P-E-0006.02 Biology-Keys 3.3.3.4 The coral reef is not within the region of influence of the...Region 4 P-W-0065 Musselman, David P-W-0021 Orlandi, Robin; Board of Directors of Reef Relief P-W-0014 Percy, George W.; Division of Historical...answer above. P-W-0007.03 Florida Keys- reef 3.3.3.3 Comment noted. P-W-0007.04 Launch emissions 3.1.14.4 3.3.14.4 The balance of the hydrogen

76 FR 52318 - U.S. Coral Reef Task Force Public Meeting and Public Comment

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-22

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration U.S. Coral Reef Task Force... of the U.S. Coral Reef Task Force. The meeting will be held in Ft. Lauderdale, Florida. This meeting, the 26th bi-annual meeting of the U.S. Coral Reef Task Force, provides a forum for coordinated...

A new record of the late Pleistocene coral Pocillopora palmata from the Dry Tortugas, Florida reef tract, USA

USGS Publications Warehouse

Toth, Lauren T.; Kuffner, Ilsa B.; Cheng, Hai; Edwards, R. Lawrence

2015-01-01

Pocilloporid corals dominated shallow-water environments in the Caribbean during much of the Cenozoic; however, the regional diversity of this family declined over the last 15 My, culminating with the extinction of its final member, Pocillopora palmata, during the latest Pleistocene. Here we present a new record of P. palmata from Dry Tortugas National Park in the Florida Keys and infer its likely age. Although most existing records of P. palmata are from the sub-aerial reef deposits of MIS5e (∼ 125 ka), the presently submerged reef in the Dry Tortugas was too deep (> 18 m) during this period to support significant reef growth. In contrast, the maximum water depth during MIS5a (∼ 82 ka) was only ∼ 5.6 m, which would have been ideal for P. palmata. Diagenetic alteration prevented direct dating of the samples; however, the similarity between the depths of the Pleistocene bedrock in the Dry Tortugas and other reefs in the Florida Keys, which have been previously dated to MIS5a, support the conclusion that P. palmata likely grew in the Dry Tortugas during this period. Our study provides important new information on the history of P. palmata, but it also highlights the vital need for more comprehensive studies of the Quaternary history of Caribbean reef development. With modern reef degradation already driving yet another restructuring of Caribbean coral assemblages, insights from past extinctions may prove critical in determining the prognosis of Caribbean reefs in the future.

Cruise Report; RV Moana Wave cruise M1-01-GM; the bathymetry and acoustic backscatter of the mid shelf to upper slope off Panama City, Florida, northeastern Gulf of Mexico; September 3, through October 12, 2001, Panama City, FL to Panama City, FL

USGS Publications Warehouse

Gardner, James V.; Mayer, Larry A.; Hughes-Clarke, John E.; Dartnell, Peter; Sulak, Kenneth J.

2001-01-01

A zone of deep-water reefs is thought to extend from the mid and outer shelf south of Mississippi and Alabama to at least the northwestern Florida shelf off Panama City, Florida (Figure 1, 67kb). The reefs off Mississippi and Alabama are found in water depths of 60 to 120 m (Ludwick and Walton, 1957; Gardner et al., in press) and were the focus of a multibeam echosounder (MBES) mapping survey by the U.S. Geological Survey (USGS) in 2000 (Gardner et al., 2000; in press). If this deep-water-reef trend does exist along the northwestern Florida shelf, then it is critical to determine the accurate geomorphology and type of the reefs that occur because of their importance as benthic habitats for fisheries. Precisely georeferenced high-resolution mapping of bathymetry is a fundamental first step in the study of areas suspected to be critical habitats. Morphology is thought to be critical to defining the distribution of dominant demersal plankton/planktivores communities. Fish faunas of shallow hermatypic reefs have been well studied, but those of deep ahermatypic reefs have been relatively ignored. The ecology of deep-water ahermatypic reefs is fundamentally different from hermatypic reefs because autochthonous intracellular symbiotic zooxanthellae (the carbon source for hermatypic corals) do not form the base of the trophic web in ahermatypic reefs. Instead, exogenous plankton, transported to the reef by currents, serves as the primary carbon source. Thus, one of the principle uses of the morphology data will be to identify whether any reefs found are hermatypic or ahermatypic in origin. Community structure and trophodynamics of demersal fishes of the outer continental of the northeastern Gulf of Mexico presently are the focus of a major USGS reseach project. A goal of the project is to answer questions concerning the relative roles played by morphology and surficial geology in controling biological differentiation. Deep-water reefs are important because they are fish havens, key spawning sites, and are critical early larval and juvenile habitats for economically important sport/food fishes. It is known that deep-water reefs function as a key source for re-population (via seasonal and ontogenetic migration) of heavily impacted inshore reefs. The deep-water reefs south of Mississippi and Alabama support a lush fauna of ahermatypic hard corals, soft corals, black corals, sessile crinoids and sponges, that together form a living habitat for a well-developed fish fauna. The fish fauna comprises typical Caribbean reef fishes and Carolinian shelf fishes, plus epipelagic fishes, and a few deep-sea fishes. The base of the megafaunal invertebrate food web is plankton, borne by essentially continuous semi-laminar currents generated by eddies, spawned off the Loop Current, that periodically travel across the shelf edge. A few, sidescan-sonar surveys have been made of areas locally identified as Destin Pinnacles, Steamboat Lumps Marine Reserve (Koenig et al., 2000; Scanlon, et al., 2000; 2001), Twin Ridges (Briere, et al., 2000; Scanlon, et al., 2000), and Madison-Swanson Marine Reserve (Koenig et al., 2000; Scanlon, et al., 2000; 2001). However, no quantitative and little qualitative information about the geomorphology and surficial geology can be gained from these data. Existing bathymetry along the northwestern Florida shelf suggests the existence of areas of possible isolated deep-water reefs. NOAA bathymetric maps NOS NH16-9 and NG16-12 show geomorphic expressions that hint of the presence of reefs in isolated areas rather than in a continuous zone. There has been no systematic, high-resolution bathymetry collected in this area, prior to this cruise. After the successful mapping of the deep-water reefs on the Mississippi and Alabama shelf (Gardner et al., 2000; in press), a partnership composed of the USGS, Minerals Management Service, and NOAA was formed to continue the deep-reef mapping to the northwest Florida mid shelf and upper slope. This cruise is the first fruit of that partnership.

Severe 2010 Cold-Water Event Caused Unprecedented Mortality to Corals of the Florida Reef Tract and Reversed Previous Survivorship Patterns

PubMed Central

Lirman, Diego; Schopmeyer, Stephanie; Manzello, Derek; Gramer, Lewis J.; Precht, William F.; Muller-Karger, Frank; Banks, Kenneth; Barnes, Brian; Bartels, Erich; Bourque, Amanda; Byrne, James; Donahue, Scott; Duquesnel, Janice; Fisher, Louis; Gilliam, David; Hendee, James; Johnson, Meaghan; Maxwell, Kerry; McDevitt, Erin; Monty, Jamie; Rueda, Digna; Ruzicka, Rob; Thanner, Sara

2011-01-01

Background Coral reefs are facing increasing pressure from natural and anthropogenic stressors that have already caused significant worldwide declines. In January 2010, coral reefs of Florida, United States, were impacted by an extreme cold-water anomaly that exposed corals to temperatures well below their reported thresholds (16°C), causing rapid coral mortality unprecedented in spatial extent and severity. Methodology/Principal Findings Reef surveys were conducted from Martin County to the Lower Florida Keys within weeks of the anomaly. The impacts recorded were catastrophic and exceeded those of any previous disturbances in the region. Coral mortality patterns were directly correlated to in-situ and satellite-derived cold-temperature metrics. These impacts rival, in spatial extent and intensity, the impacts of the well-publicized warm-water bleaching events around the globe. The mean percent coral mortality recorded for all species and subregions was 11.5% in the 2010 winter, compared to 0.5% recorded in the previous five summers, including years like 2005 where warm-water bleaching was prevalent. Highest mean mortality (15%–39%) was documented for inshore habitats where temperatures were <11°C for prolonged periods. Increases in mortality from previous years were significant for 21 of 25 coral species, and were 1–2 orders of magnitude higher for most species. Conclusions/Significance The cold-water anomaly of January 2010 caused the worst coral mortality on record for the Florida Reef Tract, highlighting the potential catastrophic impacts that unusual but extreme climatic events can have on the persistence of coral reefs. Moreover, habitats and species most severely affected were those found in high-coral cover, inshore, shallow reef habitats previously considered the “oases” of the region, having escaped declining patterns observed for more offshore habitats. Thus, the 2010 cold-water anomaly not only caused widespread coral mortality but also reversed prior resistance and resilience patterns that will take decades to recover. PMID:21853066

Development of small carbonate banks on the south Florida platform margin: Response to sea level and climate change

USGS Publications Warehouse

Mallinson, David J.; Hine, Albert C.; Hallock, Pamela; Locker, Stanley D.; Shinn, Eugene; Naar, David; Donahue, Brian; Weaver, Douglas C.

2003-01-01

Geophysical and coring data from the Dry Tortugas, Tortugas Bank, and Riley’s Hump on the southwest Florida margin reveal the stratigraphic framework and growth history of these carbonate banks. The Holocene reefs of the Dry Tortugas and Tortugas Bank are approximately 14 and 10 m thick, respectively, and are situated upon Pleistocene reefal edifices. Tortugas Bank consists of the oldest Holocene corals in the Florida Keys with earliest coral recruitment occurring at ∼9.6 cal ka. Growth curves for the Tortugas Bank reveal slow growth (<1 mm/yr) until 6.2 cal ka, then a rapid increase to 3.4 mm/yr, until shallow reef demise at ∼4.2 cal ka. Coral reef development at the Dry Tortugas began at ∼6.4 cal ka. Aggradation at the Dry Tortugas was linear, and rapid (∼3.7 mm/yr) and kept pace with sea-level change. The increase in aggradation rate of Tortugas Bank at 6.2 cal ka is attributed to the growth of the Dry Tortugas reefs, which formed a barrier to inimical shelf water. Termination of shallow (<15 m below sea level) reef growth at Tortugas Bank at ∼4.2 cal ka is attributed to paleoclimate change in the North American interior that increased precipitation and fluvial discharge. Reef growth rates and characteristics are related to the rate of sea-level rise relative to the position of the reef on the shelf margin, and are additionally modified by hydrographic conditions related to climate change.

Simulating coastal to offshore interactions around the South Florida coastal seas and implications on management issues

NASA Astrophysics Data System (ADS)

Kang, H.; Kourafalou, V. H.; Hogan, P. J.; Smedstad, O.

2008-12-01

The South Florida coastal seas include shelf areas and shallow water bodies around ecologically fragile environments and Marine Protected Areas, such as Florida Bay, the Florida Keys National Marine Sanctuary (around the largest coral reef system of the continental U.S.) and the Dry Tortugas Ecological Reserve. Man- made changes in the hydrology of the Everglades have caused dramatic degradation of the coastal ecosystem through discharge in Florida Bay. New management scenarios are under way to restore historical flows. The environmental impacts of the management propositions are examined with an inter-disciplinary, multi-nested modeling system. The HYbrid Coordinate Ocean Model (HYCOM) has been employed for the Regional Model for South Florida Coastal Seas (SoFLA-HYCOM, 1/25 degree resolution) and for the embedded, high resolution coastal Florida Keys model (FKEYS- HYCOM, 1/100 degree). Boundary conditions are extracted from GODAE products: the large scale North Atlantic model (ATL-HYCOM, 1/12 degree) and the intermediate scale Gulf of Mexico model (GOM-HYCOM, 1/25 degree). The study targets the impacts of large scale oceanic features on the coastal dynamics. Eddies that travel along the Loop Current/Florida Current front are known to be an important mechanism for the interaction of nearshore and offshore flows. The high resolution FKEYS simulations reveal both mescoscale and sub- mesoscale eddy passages during a targeted 2-year simulation period (2004-2005), forced with high resolution/high frequency atmospheric forcing. Eddies influence sea level changes in the vicinity of Florida Bay with possible implications on current and future flushing patterns. They also enable upwelling of cooler, nutrient-rich waters in the vicinity of the Reef Tract and they influence transport and recruitment pathways for coral fish larvae, as they carry waters of different properties (such as river-borne low-salinity/nutrient-rich waters from as far as the Mississippi River) and waters containing larvae from upstream sources (such as from the Dry Tortugas spawning grounds).

EAARL Submarine Topography - Northern Florida Keys Reef Tract

USGS Publications Warehouse

Brock, John C.; Wright, C. Wayne; Nayegandhi, Amar; Patterson, Matt; Travers, Laurinda J.; Wilson, Iris

2007-01-01

This Web site contains 32 Lidar-derived bare earth topography maps and GIS files for the Northern Florida Keys Reef Tract. These lidar-derived submarine topographic maps were produced as a collaborative effort between the U.S. Geological Survey (USGS) Coastal and Marine Geology Program, FISC St. Petersburg, Florida, the National Park Service (NPS) South Florida/Caribbean Network Inventory and Monitoring Program, and the National Aeronautics and Space Administration (NASA) Wallops Flight Facility. One objective of this research is to create techniques to survey coral reefs and barrier islands for the purposes of geomorphic change studies, habitat mapping, ecological monitoring, change detection, and event assessment. As part of this project, data from an innovative instrument under development at the NASA Wallops Flight Facility, the NASA Experimental Airborne Advanced Research Lidar (EAARL) are being used. This sensor has the potential to make significant contributions in this realm for measuring subaerial and submarine topography wthin cross-environment surveys. High spectral resolution, water-column correction, and low costs were found to be key factors in providing accurate and affordable imagery to costal resource managers.

Population distribution, host-switching, and chemical sensing in the symbiotic shrimp Lysmata pederseni: implications for its mating system in a changing reef seascape

NASA Astrophysics Data System (ADS)

Baeza, J. Antonio; Guéron, Rodrigo; Simpson, Lunden; Ambrosio, Louis J.

2016-12-01

Lysmata pederseni, a protandric simultaneously hermaphroditic shrimp that inhabits the tube sponge Callyspongia vaginalis, is monogamous in the central and southeastern Caribbean Sea. We tested the null hypothesis of monogamy in a northern Caribbean population. In the Florida Keys, shrimps did not inhabit host individuals in pairs with a frequency greater than expected by chance alone. Hermaphrodites inhabited sponges solitarily and often brooded embryos. Hermaphrodites do not store sperm and need to be inseminated shortly after molting to fertilize a new batch of eggs. Thus, males and/or other hermaphrodites are likely switching among host individuals in search of sexual partners. Field experiments demonstrated low shrimp host fidelity. Host residence time was 2 times shorter for males than for hermaphrodites. We inferred a polygynandrous mating system in L. pederseni from the Florida Keys, with male-role and young hermaphrodites often moving among sponges in search of older, more sedentary, female-role hermaphrodites. We expected shrimps to use water-borne chemical cues originating from conspecifics or sponges to locate sexual partners. Experiments demonstrated that shrimps were attracted to water-borne cues originating from sponges but not conspecifics. We have described the mating system of a reef-associated shrimp in a fast-pace shifting seascape increasingly dominated by sponges and vanishing stony corals. In the central and southeastern Caribbean Sea, with greater coral cover and lower sponge abundance than in the Florida Keys, the same species is monogamous. Whether or not similar shifts in the social organization of other coral reef-dwelling marine organisms are occurring due to contemporary changes in seascapes is a relevant topic that deserves further attention.

43 CFR 15.1 - Scope.

Code of Federal Regulations, 2013 CFR

2013-10-01

...: Interior Office of the Secretary of the Interior KEY LARGO CORAL REEF PRESERVE § 15.1 Scope. The State of Florida has established a similar coral reef preserve on an area situated shoreward of a line three geographic miles from Key Largo and contiguous to the Key Largo Coral Reef Preserve. It is the policy of the...

43 CFR 15.1 - Scope.

Code of Federal Regulations, 2014 CFR

2014-10-01

...: Interior Office of the Secretary of the Interior KEY LARGO CORAL REEF PRESERVE § 15.1 Scope. The State of Florida has established a similar coral reef preserve on an area situated shoreward of a line three geographic miles from Key Largo and contiguous to the Key Largo Coral Reef Preserve. It is the policy of the...

43 CFR 15.1 - Scope.

Code of Federal Regulations, 2012 CFR

2012-10-01

...: Interior Office of the Secretary of the Interior KEY LARGO CORAL REEF PRESERVE § 15.1 Scope. The State of Florida has established a similar coral reef preserve on an area situated shoreward of a line three geographic miles from Key Largo and contiguous to the Key Largo Coral Reef Preserve. It is the policy of the...

43 CFR 15.1 - Scope.

Code of Federal Regulations, 2010 CFR

2010-10-01

...: Interior Office of the Secretary of the Interior KEY LARGO CORAL REEF PRESERVE § 15.1 Scope. The State of Florida has established a similar coral reef preserve on an area situated shoreward of a line three geographic miles from Key Largo and contiguous to the Key Largo Coral Reef Preserve. It is the policy of the...

75 FR 72655 - Marine Sanitation Device Discharge Regulations for the Florida Keys National Marine Sanctuary

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-26

... primary objective of the NMSA is to protect marine resources, such as coral reefs, sunken historical... of coral reef resources was initiated in 1996 because of the observed but poorly quantified loss of... proximity to coral reef or seagrass habitats (see environmental assessment for citations). Recent data show...

43 CFR 15.1 - Scope.

Code of Federal Regulations, 2011 CFR

2011-10-01

...: Interior Office of the Secretary of the Interior KEY LARGO CORAL REEF PRESERVE § 15.1 Scope. The State of Florida has established a similar coral reef preserve on an area situated shoreward of a line three geographic miles from Key Largo and contiguous to the Key Largo Coral Reef Preserve. It is the policy of the...

Diver perceptions of Florida Keys Reef conditions by specialization level

Treesearch

Sarah Young; David Loomis

2010-01-01

Understanding different user-group values, preferences, and perceptions can lead to more efficient and effective management decisions, reducing conflict and helping to balance eco-societal goals. User perceptions of reef condition, ecological health, and impacts to reefs can provide valuable information to managers on motivations, values, willingness to comply with...

Marine sponges (Porifera: Demospongiae) from the Gulf of México, new records and redescription of Erylus trisphaerus (de Laubenfels, 1953).

PubMed

Ugalde, Diana; Gómez, Patricia; Simões, Nuno

2015-01-19

Marine sponges usually constitute the most diverse group of the benthic community in coral reefs. Although they are reasonably well studied at the northern Gulf of Mexico (GMx), the southern GMx is poorly known and lacks records from many major reef systems that lie off the Mexican coast. The present taxonomic study is the first sponge account from Alacranes reef, the largest coral reef system in the GMx, and from the shallow reef banks of Sisal, both in the northwest Yucatan Peninsula. The 19 species herein described represent the first sponge fauna records from these reefs. Among these, seven species represent new record for GMx: Erylus formosus, Cliona flavifodina, Spirastrella aff. mollis, Strongylacidon bermuda, Topsentia bahamensis, Agelas tubulata and Chelonaplysilla aff. erecta. Twelve species are new records for the Southern GMx: Erylus trisphaerus, Cliona amplicavata, Chondrilla caribensis, Halichondria lutea, Hymeniacidon caerulea, Axinella corrugata, Dragmacidon reticulatum, Chalinula molitba, Amphimedon caribica, A. complanata, Hyatella cavernosa and Dysidea variabilis. Additionally, a redescription of Erylus trisphaerus is presented which had not been reviewed since its original description in 1953 off Western Florida, except that it was listed for north La Habana, Cuba. 

Measuring coral reef community metabolism using new benthic chamber technology

USGS Publications Warehouse

Yates, K.K.; Halley, R.B.

2003-01-01

Accurate measurement of coral reef community metabolism is a necessity for process monitoring and in situ experimentation on coral reef health. Traditional methodologies used for these measurements are effective but limited by location and scale constraints. We present field trial results for a new benthic chamber system called the Submersible Habitat for Analyzing Reef Quality (SHARQ). This large, portable incubation system enables in situ measurement and experimentation on community- scale metabolism. Rates of photosynthesis, respiration, and calcification were measured using the SHARQ for a variety of coral reef substrate types on the reef flat of South Molokai, Hawaii, and in Biscayne National Park, Florida. Values for daily gross production, 24-h respiration, and net calcification ranged from 0.26 to 6.45 g O2 m-2 day-1, 1.96 to 8.10 g O2 m-2 24 h-1, and 0.02 to 2.0 g CaCO3 m -2 day-1, respectively, for all substrate types. Field trials indicate that the SHARQ incubation chamber is an effective tool for in situ isolation of a water mass over a variety of benthic substrate types for process monitoring, experimentation, and other applications.

Host population genetic structure and zooxanthellae diversity of two reef-building coral species along the Florida Reef Tract and wider Caribbean

NASA Astrophysics Data System (ADS)

Baums, I. B.; Johnson, M. E.; Devlin-Durante, M. K.; Miller, M. W.

2010-12-01

In preparation for a large-scale coral restoration project, we surveyed host population genetic structure and symbiont diversity of two reef-building corals in four reef zones along the Florida reef tract (FRT). There was no evidence for coral population subdivision along the FRT in Acropora cervicornis or Montastraea faveolata based on microsatellite markers. However, in A. cervicornis, significant genetic differentiation was apparent when extending the analysis to broader scales (Caribbean). Clade diversity of the zooxanthellae differed along the FRT. A. cervicornis harbored mostly clade A with clade D zooxanthellae being prominent in colonies growing inshore and in the mid-channel zones that experience greater temperature fluctuations and receive significant nutrient and sediment input. M. faveolata harbored a more diverse array of symbionts, and variation in symbiont diversity among four habitat zones was more subtle but still significant. Implications of these results are discussed for ongoing restoration and conservation work.

Differential Impacts of Land-Based Sources of Pollution on the Microbiota of Southeast Florida Coral Reefs

PubMed Central

Staley, Christopher; Kaiser, Thomas; Gidley, Maribeth L.; Enochs, Ian C.; Jones, Paul R.; Goodwin, Kelly D.; Sinigalliano, Christopher D.

2017-01-01

ABSTRACT Coral reefs are dynamic ecosystems known for decades to be endangered due, in large part, to anthropogenic impacts from land-based sources of pollution (LBSP). In this study, we utilized an Illumina-based next-generation sequencing approach to characterize prokaryotic and fungal communities from samples collected off the southeast coast of Florida. Water samples from coastal inlet discharges, oceanic outfalls of municipal wastewater treatment plants, treated wastewater effluent before discharge, open ocean samples, and coral tissue samples (mucus and polyps) were characterized to determine the relationships between microbial communities in these matrices and those in reef water and coral tissues. Significant differences in microbial communities were noted among all sample types but varied between sampling areas. Contamination from outfalls was found to be the greatest potential source of LBSP influencing native microbial community structure among all reef samples, although pollution from inlets was also noted. Notably, reef water and coral tissue communities were found to be more greatly impacted by LBSP at southern reefs, which also experienced the most degradation during the course of the study. The results of this study provide new insights into how microbial communities from LBSP can impact coral reefs in southeast Florida and suggest that wastewater outfalls may have a greater influence on the microbial diversity and structure of these reef communities than do contaminants carried in runoff, although the influences of runoff and coastal inlet discharge on coral reefs are still substantial. IMPORTANCE Coral reefs are known to be endangered due to sewage discharge and to runoff of nutrients, pesticides, and other substances associated with anthropogenic activity. Here, we used next-generation sequencing to characterize the microbial communities of potential contaminant sources in order to determine how environmental discharges of microbiota and their genetic material may influence the microbiomes of coral reef communities and coastal receiving waters. Runoff delivered through inlet discharges impacted coral microbial communities, but impacts from oceanic outfalls carrying treated wastewater were greater. Geographic differences in the degree of impact suggest that coral microbiomes may be influenced by the microbiological quality of treated wastewater. PMID:28341673

Differential Impacts of Land-Based Sources of Pollution on the Microbiota of Southeast Florida Coral Reefs.

PubMed

Staley, Christopher; Kaiser, Thomas; Gidley, Maribeth L; Enochs, Ian C; Jones, Paul R; Goodwin, Kelly D; Sinigalliano, Christopher D; Sadowsky, Michael J; Chun, Chan Lan

2017-05-15

Coral reefs are dynamic ecosystems known for decades to be endangered due, in large part, to anthropogenic impacts from land-based sources of pollution (LBSP). In this study, we utilized an Illumina-based next-generation sequencing approach to characterize prokaryotic and fungal communities from samples collected off the southeast coast of Florida. Water samples from coastal inlet discharges, oceanic outfalls of municipal wastewater treatment plants, treated wastewater effluent before discharge, open ocean samples, and coral tissue samples (mucus and polyps) were characterized to determine the relationships between microbial communities in these matrices and those in reef water and coral tissues. Significant differences in microbial communities were noted among all sample types but varied between sampling areas. Contamination from outfalls was found to be the greatest potential source of LBSP influencing native microbial community structure among all reef samples, although pollution from inlets was also noted. Notably, reef water and coral tissue communities were found to be more greatly impacted by LBSP at southern reefs, which also experienced the most degradation during the course of the study. The results of this study provide new insights into how microbial communities from LBSP can impact coral reefs in southeast Florida and suggest that wastewater outfalls may have a greater influence on the microbial diversity and structure of these reef communities than do contaminants carried in runoff, although the influences of runoff and coastal inlet discharge on coral reefs are still substantial. IMPORTANCE Coral reefs are known to be endangered due to sewage discharge and to runoff of nutrients, pesticides, and other substances associated with anthropogenic activity. Here, we used next-generation sequencing to characterize the microbial communities of potential contaminant sources in order to determine how environmental discharges of microbiota and their genetic material may influence the microbiomes of coral reef communities and coastal receiving waters. Runoff delivered through inlet discharges impacted coral microbial communities, but impacts from oceanic outfalls carrying treated wastewater were greater. Geographic differences in the degree of impact suggest that coral microbiomes may be influenced by the microbiological quality of treated wastewater. Copyright © 2017 Staley et al.

THE EPIZOOTIOLOGY OF CORAL DISEASES IN SOUTH FLORIDA

EPA Science Inventory

The condition of South Florida reefs was assessed to determine the prevalence of coral diseases. Ten surveys were conducted from 1997 until 2004 in the Florida Keys National Marine Sanctuary, Biscayne National Park, New Grounds, Dry Tortugas National Park, and Tortugas Ecologica...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Steinen, R.; Tennet, P.

Fine-grained sediments present in Florida Bay, the inner reef tract of Florida, and the Great Bahama Bank are formed by three processes. The sediments differ primarily in the amount of 4-{mu}m-long aragonite needles that comprise the sediment, but also in the amount of aragonite. Florida Bay muds are composed primarily of equant 1 {mu}m grains; less than 20% are needles. The fine-grained fraction from the inner reef tract of Florida contains more aragonite needles than Florida Bay muds. Some samples contain nearly 90% needles, whereas samples, from adjacent localities contain only 50%. Sediment from both areas is deposited and mixedmore » by bioturbation on the deltas at tidal passes through the Florida Keys. The amount of needle sediment diminishes rapidly away from the tidal passes in Florida Bay. The fine-grained fraction on the Great Bahama Bank is dominated by 4-{mu}m-long needles of aragonite but may contain fragments and whole tests of foraminifers. In general, the more abundant the aragonite-needle content is in any of the sediment, the greater the aragonite content of that sediment. The three main processes responsible for mud production on the Florida-Bahama Platform are (1) disintegration of skeletal encrustations, mainly red algae and spirobid worm tubules, on Thalassia grass blades; (2) postmortem disaggregation of aragonite needles from green algae; and (3) direct precipitation of aragonite and Mg-calcite from supersaturated marine waters. Where sufficient nutrients exist in the water column, such as in Florida Bay, mud production is dominated by the epibionts on the Thalassia grass community. Less nutrients in the water column of the inner reef tract results in fewer encrustations.« less

Oysters and Oyster Reef Communities in Florida.

ERIC Educational Resources Information Center

Knight, Jean; Bly, Joe

1989-01-01

The habitat, life history, feeding, classification, anatomy and pearl production of the American oyster (Crassostrea virginica) are presented. A list of other oyster reef inhabitants and predators is provided. Harvest and habitat loss are discussed. (CW)

NOAA Photo Library - The Coral Kingdom

Science.gov Websites

that corals evolved into modern reef-building organisms within the past 25 million years. Over those navigation of the Florida Straits. Today, coral reefs, both modern and fossil, are studied as indicators of

Investigations into the \\delta 15N and \\delta 13C of POM, Primary Producers, and Filter Feeders in the Florida Keys Coral Reef Tract

NASA Astrophysics Data System (ADS)

Lamb, K. A.; Swart, P. K.

2004-12-01

In order to examine the possible influences of anthropogenic wastes on the Florida Keys coral reef tract, water column particulate organic matter \\(POM\\), primary producers, and filter feeders were sampled from within the coastal waters of the reef tract, and analyzed for \\delta 15N and \\delta 13C isotopic composition. The POM was found to have a mean \\delta 15N value of +4.13\\permil (\\pm 1.03\\permil\\) and a mean \\delta 13C value of -19.93\\permil (\\pm 0.58\\permil). The \\delta 13C values for POM across the entire reef tract were heavier inshore \\(avg \\delta 13C = -18.29\\permil \\(\\pm 1.04\\permil\\)\\) and became lighter offshore \\(avg \\delta 13C = -21.41\\permil \\(\\pm 0.89\\permil\\)\\), which is consistent with influences from benthic algae/seagrass closer to shore in contrast to open-marine influences offshore. The \\delta 15N values for POM were neither temporally nor spatially interrelated, as the data showed no clear trend moving in either the inshore or offshore direction. Instead, our \\delta 15N values for POM reflect a combined influence from nitrogen fixation \\(\\approx0\\permil\\), zooplankton and other suspended particles, and not anthropogenic wastes \\(>+10\\permil\\), as other authors claim. The mean isotopic composition of various primary producers suggests a nitrogen fixation source of nutrients to the reef system (Halimeda sp. (\\delta 15N = 2.43\\permil; \\delta 13C = -18.04\\permill), Dictyota sp. (\\delta 15N = +2.86\\permil; \\delta 13C = -16.30\\permil), Thalassia sp. (\\delta 15N = 2.39\\permil; \\delta 13C = -10.32\\permil)), while filter feeders were found to have a mean isotopic composition more similar to POM values (sponge \\delta 15N = 4.95\\permil; \\delta 13C = -18.02\\permil). Our data simply do not appear to show evidence of anthropogenic influence on the Florida Keys reef tract. Further more, we suggest that \\delta 15N values of +4\\permil, which have recently been suggested to indicate anthropogenic influences are not, in fact, indicative of sewage.

Characterization of available light for seagrass and patch reef productivity in Sugarloaf Key, Lower Florida Keys

USGS Publications Warehouse

Toro-Farmer, Gerardo; Muller-Karger, Frank E.; Vega-Rodriguez, Maria; Melo, Nelson; Yates, Kimberly K.; Johns, Elizabeth; Cerdeira-Estrada, Sergio; Herwitz, Stan R.

2016-01-01

Light availability is an important factor driving primary productivity in benthic ecosystems, but in situ and remote sensing measurements of light quality are limited for coral reefs and seagrass beds. We evaluated the productivity responses of a patch reef and a seagrass site in the Lower Florida Keys to ambient light availability and spectral quality. In situ optical properties were characterized utilizing moored and water column bio-optical and hydrographic measurements. Net ecosystem productivity (NEP) was also estimated for these study sites using benthic productivity chambers. Our results show higher spectral light attenuation and absorption, and lower irradiance during low tide in the patch reef, tracking the influx of materials from shallower coastal areas. In contrast, the intrusion of clearer surface Atlantic Ocean water caused lower values of spectral attenuation and absorption, and higher irradiance in the patch reef during high tide. Storms during the studied period, with winds >10 m·s−1, caused higher spectral attenuation values. A spatial gradient of NEP was observed, from high productivity in the shallow seagrass area, to lower productivity in deeper patch reefs. The highest daytime NEP was observed in the seagrass, with values of almost 0.4 g·O2·m−2·h−1. Productivity at the patch reef area was lower in May than during October 2012 (mean = 0.137 and 0.177 g·O2·m−2·h−1, respectively). Higher photosynthetic active radiation (PAR) levels measured above water and lower light attenuation in the red region of the visible spectrum (~666 to ~699 nm) had a positive correlation with NEP. Our results indicate that changes in light availability and quality by suspended or resuspended particles limit benthic productivity in the Florida Keys.

33 CFR 100.701 - Special Local Regulations; Marine Events in the Seventh Coast Guard District

Code of Federal Regulations, 2010 CFR

2010-07-01

... Midwinter's Coral Reef Yacht Club Biscayne Bay, 2.3 nautical miles offshore from the Coral Bay, Florida; All..., FL. Coral Reef Yacht Club Fourth of July Firepower Displays 700 ft offshore from Vizcaya in Biscayne.... December—4th weekend Orange Bowl Youth Sailing Regatta Coral Reef Yacht Club Southern Biscayne Bay inside...

33 CFR 100.701 - Special Local Regulations; Marine Events in the Seventh Coast Guard District

Code of Federal Regulations, 2011 CFR

2011-07-01

... Midwinter's Coral Reef Yacht Club Biscayne Bay, 2.3 nautical miles offshore from the Coral Bay, Florida; All..., FL. Coral Reef Yacht Club Fourth of July Firepower Displays 700 ft offshore from Vizcaya in Biscayne.... December—4th weekend Orange Bowl Youth Sailing Regatta Coral Reef Yacht Club Southern Biscayne Bay inside...

Dynamics of internal waves on the Southeast Florida shelf: Implications for cross-shelf exchange and turbulent mixing on a barrier reef system

NASA Astrophysics Data System (ADS)

Davis, Kristen Alexis

The dynamics of internal waves shoaling on the Southeast Florida shelf and the resulting stratified turbulence in the shelf bottom boundary layer are investigated using observational studies completed during the summers of 2003-2005. This work is driven by a desire to understand the effects of internal wave-driven flow and the shoreward transport of cool, nutrient-rich water masses on cross-shelf exchange, vertical mixing, and mass transfer to benthic reef organisms. Shelf sea internal wave fields are typically highly variable and dominated by wind and tidal forces. However, this is not necessarily true for outer shelf regions or very narrow shelves where remote physical processes originating over the slope or deep ocean may exert a strong influence on the internal wave climate. During the summers of 2003 and 2004 observational studies were conducted to examine the effects of a western boundary current (the Florida Current), tides, and wind on the mean currents and internal wave field on the outer Southeast Florida shelf. We present evidence that suggests that the Florida Current plays as large a role in the determination of the high frequency internal wave field as tidal forces. These observations and analyses show that it is necessary to include the forcing from the Florida Current meanders and instabilities in order to predict accurately the episodic nature of the internal wave field on the Southeast Florida shelf. Deep ocean and continental shelf processes intersect at the shelf edge and influence the exchange of water masses and their associated characteristics including heat, nutrients, sediment, and larvae across the shelf. Thus, the dynamics of cross-shelf circulation have important consequences for organisms living on the shelf. In the second phase of this work, we investigate physical mechanisms controlling the exchange of water masses during the summer season across the Southeast Florida shelf. A time series of cross-shelf transport from May to August 2003 suggests that, during the summer months, instabilities in the Florida Current and nonlinear internal waves are the primary mechanisms driving cross-shelf transport on the outer shelf Surface tide, wind, and wave-driven transport were found to be small in comparison. Additionally, this data set highlights the importance of baroclinic processes to cross-shelf transport in this region. In the last phase of my research, I sought to investigate how boundary layer dynamics over a rough coral bed were modified by shoaling internal waves and to understand the implications for mixing and mass transfer to the bed. Results are presented from an observational study of the turbulent bottom boundary layer on the outer Southeast Florida shelf in July and August 2005. Turbulence in the reef bottom boundary layer is highly variable in time and is modified by near bed flow, shear, and stratification driven by shoaling internal waves. We examined turbulence in the bottom boundary layer during a typical internal wave event and found that in addition to the episodic onshore transport of cool, subthermocline water masses, with elevated nutrient concentrations, bottom-intensified currents from shoaling internal waves can increase turbulent dissipation and mixing in the reef bottom boundary layer. Additionally, we show that estimates of flux Richardson number, calculated directly from measurements of dissipation and buoyancy flux, support the dependence of R f on turbulent intensity, epsilon/nuN 2, a relationship that has only been previously shown in laboratory and numerical work. While the importance of surface gravity waves in generating turbulent mixing and controlling mass transfer on coral reefs has been well documented in the literature, this work represents the first time the appropriate field data have been collected for a detailed dynamic analysis of the physical effects and biological implications of internal waves on reef ecosystems. Results from these studies suggest that for reef communities exposed to continental shelf and slope processes, internal waves may play an important role in cross-shelf transport and mass transfer to benthic organisms and may be essential to modeling key biological processes, the connectivity of coral populations, or designing and managing marine reserves and fisheries.

Predator-prey interactions between the corallivorous snail Coralliophila abbreviata and the carnivorous deltoid rock snail Thais deltoidea.

PubMed

Sharp, William C; Delgado, Gabriel A

2015-10-01

Coral reefs in the Florida Keys have become highly degraded in recent decades, prompting efforts to reestablish populations of vital reef-accreting corals to restore reef structure and ecological function. However, predation on these corals by the corallivorous gastropod Coralliophila abbreviata has been a substantial and chronic impediment to these restoration efforts. We conducted laboratory experiments to determine whether Thais deltoidea, a carnivorous gastropod that commonly occurs with C. abbreviata, is a predator of C. abbreviata. We demonstrated that T. deltoidea readily preys upon C. abbreviata and preferentially targets smaller individuals, a foraging behavior that may optimize the energy gained due to reduced handling and consumption times. If this trophic relationship proves ecologically relevant, understanding the predator-prey dynamics between these species could ultimately aid in the development of a comprehensive coral reef restoration strategy for Florida.

A multiscale analysis of coral reef topographic complexity using lidar-derived bathymetry

USGS Publications Warehouse

Zawada, D.G.; Brock, J.C.

2009-01-01

Coral reefs represent one of the most irregular substrates in the marine environment. This roughness or topographic complexity is an important structural characteristic of reef habitats that affects a number of ecological and environmental attributes, including species diversity and water circulation. Little is known about the range of topographic complexity exhibited within a reef or between different reef systems. The objective of this study was to quantify topographic complexity for a 5-km x 5-km reefscape along the northern Florida Keys reef tract, over spatial scales ranging from meters to hundreds of meters. The underlying dataset was a 1-m spatial resolution, digital elevation model constructed from lidar measurements. Topographic complexity was quantified using a fractal algorithm, which provided a multi-scale characterization of reef roughness. The computed fractal dimensions (D) are a measure of substrate irregularity and are bounded between values of 2 and 3. Spatial patterns in D were positively correlated with known reef zonation in the area. Landward regions of the study site contain relatively smooth (D ??? 2.35) flat-topped patch reefs, which give way to rougher (D ??? 2.5), deep, knoll-shaped patch reefs. The seaward boundary contains a mixture of substrate features, including discontinuous shelf-edge reefs, and exhibits a corresponding range of roughness values (2.28 ??? D ??? 2.61). ?? 2009 Coastal Education and Research Foundation.

Resilience in carbonate production despite three coral bleaching events in 5 years on an inshore patch reef in the Florida Keys.

PubMed

Manzello, Derek P; Enochs, Ian C; Kolodziej, Graham; Carlton, Renée; Valentino, Lauren

2018-01-01

The persistence of coral reef frameworks requires that calcium carbonate (CaCO 3 ) production by corals and other calcifiers outpaces CaCO 3 loss via physical, chemical, and biological erosion. Coral bleaching causes declines in CaCO 3 production, but this varies with bleaching severity and the species impacted. We conducted census-based CaCO 3 budget surveys using the established ReefBudget approach at Cheeca Rocks, an inshore patch reef in the Florida Keys, annually from 2012 to 2016. This site experienced warm-water bleaching in 2011, 2014, and 2015. In 2017, we obtained cores of the dominant calcifying coral at this site, Orbicella faveolata , to understand how calcification rates were impacted by bleaching and how they affected the reef-wide CaCO 3 budget. Bleaching depressed O. faveolata growth and the decline of this one species led to an overestimation of mean (± std. error) reef-wide CaCO 3 production by + 0.68 (± 0.167) to + 1.11 (± 0.236) kg m -2  year -1 when using the static ReefBudget coral growth inputs. During non-bleaching years, the ReefBudget inputs slightly underestimated gross production by - 0.10 (± 0.022) to - 0.43 (± 0.100) kg m -2  year -1 . Carbonate production declined after the first year of back-to-back bleaching in 2014, but then increased after 2015 to values greater than the initial surveys in 2012. Cheeca Rocks is an outlier in the Caribbean and Florida Keys in terms of coral cover, carbonate production, and abundance of O. faveolata , which is threatened under the Endangered Species Act. Given the resilience of this site to repeated bleaching events, it may deserve special management attention.

Quantifying and Valuing Potential Climate Change Impacts on Coral Reefs in the United States

NASA Astrophysics Data System (ADS)

Wobus, C. W.; Lane, D.; Buddemeier, R. W.; Ready, R. C.; Shouse, K. C.; Martinich, J.

2012-12-01

Global climate change presents a two-pronged threat to coral reef ecosystems: increasing sea surface temperatures will increase the likelihood of episodic bleaching events, while increasing ocean carbon dioxide concentrations will change the carbonate chemistry that drives coral growth. Because coral reefs have important societal as well as ecological benefits, climate change mitigation policies that ameliorate these impacts may create substantial economic value. We present a model that evaluates both the ecological and the economic impacts of climate change on coral reefs in the United States. We use a coral reef mortality and bleaching model to project future coral reef declines under a range of climate change policy scenarios for south Florida, Puerto Rico and Hawaii. Using a benefits transfer approach, the outputs from the physical model are then used to quantify the economic impacts of these coral reef declines for each of these regions. We find that differing climate change trajectories create substantial changes in projected coral cover and value for Hawaii, but that the ecological and economic benefits of more stringent emissions scenarios are less clear for Florida and Puerto Rico. Overall, our results indicate that the effectiveness of climate change mitigation policies may be region-specific, but that these policies could result in a net increase of nearly $10 billion in economic value from coral reef-related recreational activities alone, over the 21st century.

Facies dimensions within carbonate reservoirs - guidelines from satellite images of modern analogs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harris, P.M.; Kowalik, W.S.

1995-08-01

Modern analogs illustrate the distribution of carbonate facies within an overall depositional setting and can be an integral part of a subsurface geologic model in indicating the dimensions, trend, and interrelationships of facies that might be related to reservoir and non-reservoir distribution. Satellite images from several modern carbonate areas depict the geologic characteristics that can be expected in ancient shallow-water settings. Isolated carbonate platforms- the Bahamas, Caicos Platform in the British West Indies, Chinchorro Bank offshore of Yucatan, and portions of the Belize area; Ramp-style shelf-to-basin transitions - Abu Dhabi and northern Yucatan; Rimmed shelf margins - South Florida, portionsmore » of Belize, and the Great Barrier Reef of Australia; Broad, deep shelf lagoons - the Great Barrier Reef and Belize; Reef variability - South Florida, the Bahamas, Caicos, Northern Yucatan, and Abu Dhabi; Shallow lagoon/tidal flat settings - South Florida, the Bahamas, Caicos, Northern Yucatan, Shark Bay in Western Australia, Abu Dhabi; Mixed carbonate and siliciclastic depostion - South Florida, Belize, the Great Barrier Reef, Shark Bay and Abu Dhabi. The geologic framework as illustrated by these areas is important at the development scale where lateral variation of porosity and permeability, i.e. reservoir quality, is commonly tied to facies changes and facies dimensions are required as input to reservoir models. The geologic framework is essential at the exploration scale for reservoir facies prediction and stratigraphic play concepts which are related directly to depositional facies patterns.« less

Geologic controls on the recent evolution of oyster reefs in Apalachicola Bay and St. George Sound, Florida

USGS Publications Warehouse

Twichell, D.; Edmiston, L.; Andrews, Brian; Stevenson, W.; Donoghue, J.; Poore, Richard; Osterman, Lisa E.

2010-01-01

Apalachicola Bay and St. George Sound contain the largest oyster fishery in Florida, and the growth and distribution of the numerous oyster reefs here are the combined product of modern estuarine conditions in the bay and its late Holocene evolution. Sidescan-sonar imagery, bathymetry, high-resolution seismic profiles, and sediment cores show that oyster beds occupy the crests of a series of shoals that range from 1 to 7 km in length, trend roughly north-south perpendicular to the long axes of the bay and sound, and are asymmetrical with steeper sides facing to the west. Surface sediment samples show that the oyster beds consist of shelly sand, while much of the remainder of the bay floor is covered by mud delivered by the Apalachicola River. The present oyster reefs rest on sandy delta systems that advanced southward across the region between 6400 and 4400 yr BP when sea level was 4–6 m lower than present. Oysters started to colonize the region around 5100 yr BP and became extensive by 1200 and 2400 yr BP. Since 1200 yr BP, their aerial extent has decreased due to burial of the edges of the reefs by the prodelta mud that continues to be supplied by the Apalachicola River. Oyster reefs that are still active are narrower than the original beds, have grown vertically, and become asymmetrical in cross-section. Their internal bedding indicates they have migrated westward, suggesting a net westerly transport of sediment in the bay.

Mysterious Black Water off Florida's Gulf Coast

NASA Technical Reports Server (NTRS)

2002-01-01

In mid-December last year, a mysterious black water overtook the normally bluish green waters of Florida Bay. Over the course of the winter, the extent of the water grew to encompass an area as big as Lake Okeechobee, Florida, before subsiding over the last few weeks. These images taken by the Sea-viewing Wide Field-of-View Sensor (SeaWiFS), flying aboard the Orbview-2 satellite, show the progression of the black water over the last three months. The affected water sits along the southeastern coast of Florida about fifty miles north of the Florida Keys. As of now, scientists do not know why the water appears black in satellite and aerial images or whether the water is harming the wildlife. They speculate that it could be due to an exotic algae bloom, an underwater fountain pushing up sediments from the ocean floor, or possibly chemical and sediment run-off from the nearby Shark River. Researchers at the Florida Marine Research Institute in St. Petersburg and the Mote Marine Research Institute in Sarasota are running tests to determine the chemical make-up of the water. No big fish kills have been reported in the area. But fishermen say the catch has been low this winter. In addition, the black water sits just north of the Florida Keys National Marine Sanctuary, which is home to one of the largest coral reef habitats in the United States. Toxic run-off from the Florida coastline and motor boats in the area have already destroyed many of Florida's reefs. Scientists are concerned that if the extent of the black water grows again, it could endanger these reefs. Information provided by the Naples Daily News. For up-to-date images of the area, view these SeaWiFS Images of Florida Bay. Image courtesy the SeaWiFS Project, NASA/Goddard Space Flight Center, and ORBIMAGE

Millennial-scale variability in the local radiocarbon reservoir age of the Florida Keys reef tract during the Holocene

NASA Astrophysics Data System (ADS)

Ashe, E.; Toth, L. T.; Cheng, H.; Edwards, R. L.; Richey, J. N.

2016-12-01

The oceanic passage between the Florida Keys and Cuba, known as the Straits of Florida, provides a critical connection between the tropics and northern Atlantic. Changes in the character of water masses transported through this region may ultimately have important impacts on high-latitude climate variability. Although recent studies have documented significant changes in the density of regional surface waters over millennial timescales, little is known about the contribution of local- to regional-scale changes in circulation to surface-water variability. Local variability in the radiocarbon age, ΔR, of surface waters can be used to trace changes in local water-column mixing and/or changes in regional source water over a variety of spatial and temporal scales. We reconstructed "snapshots" of ΔR variability across the Florida Keys reef tract during the last 10,000 years by dating 68 unaltered corals collected from Holocene reef cores with both U-series and radiocarbon techniques. We combined the snapshots of ΔR into a semi-empirical model to develop a robust statistical reconstruction of millennial-scale variability in ΔR on the Florida Keys reef tract. Our model demonstrates that ΔR varied significantly during the Holocene, with relatively high values during the early Holocene and around 3000 years BP and relatively low values around 7000 years BP and at present. We compare the trends in ΔR to existing paleoceanographic reconstructions to evaluate the relative contribution of local upwelling versus changes in source water to the region as a whole in driving local radiocarbon variability, and discuss the importance of these results to our understanding of regional-scale oceanographic and climatic variability during the Holocene. We also discuss the implications of our results for radiocarbon dating of marine samples from south Florida and present a model of ΔR versus 14C age that can be used to improve the accuracy of radiocarbon calibrations from this region.

Florida Integrated Science Center (FISC) Coral Reef Research

USGS Publications Warehouse

Poore, D.Z.

2008-01-01

Coral reefs provide important ecosystem services such as shoreline protection and the support of lucrative industries including fisheries and tourism. Such ecosystem services are being compromised as reefs decline due to coral disease, climate change, overfishing, and pollution. There is a need for focused, integrated science to understand the complex ecological interactions and effects of these many stressors and to provide information that will effectively guide policies and best management practices to preserve and restore these important resources. The U.S. Geological Survey Florida Integrated Science Center (USGS-FISC) is conducting a coordinated Coral Reef Research Project beginning in 2009. Specific research topics are aimed at addressing priorities identified in the 'Strategic Science for Coral Ecosystems 2007-2011' document (U.S. Geological Survey, 2007). Planned research will include a blend of historical, monitoring, and process studies aimed at improving our understanding of the development, current status and function, and likely future changes in coral ecosystems. Topics such as habitat characterization and distribution, coral disease, and trends in biogenic calcification are major themes of understanding reef structure, ecological integrity, and responses to global change.

Non-native molluscan colonizers on deliberately placed shipwrecks in the Florida Keys, with description of a new species of potentially invasive worm-snail (Gastropoda: Vermetidae).

PubMed

Bieler, Rüdiger; Granados-Cifuentes, Camila; Rawlings, Timothy A; Sierwald, Petra; Collins, Timothy M

2017-01-01

Artificial reefs created by deliberately sinking ships off the coast of the Florida Keys island chain are providing new habitat for marine invertebrates. This newly developing fouling community includes the previously reported invasive orange tube coral Tubastraea coccinea and the non-native giant foam oyster Hyotissa hyotis . New SCUBA-based surveys involving five shipwrecks spanning the upper, middle, and lower Florida Keys, show T. coccinea now also established in the lower Keys and H. hyotis likewise extending to new sites. Two additional mollusks found on the artificial reefs, the amathinid gastropod Cyclothyca pacei and gryphaeid oyster Hyotissa mcgintyi , the latter also common in the natural reef areas, are discussed as potentially non-native. A new species of sessile, suspension-feeding, worm-snail, Thylacodes vandyensi s Bieler, Rawlings & Collins n. sp. (Vermetidae), is described from the wreck of the USNS Vandenberg off Key West and discussed as potentially invasive. This new species is compared morphologically and by DNA barcode markers to other known members of the genus, and may be a recent arrival from the Pacific Ocean. Thylacodes vandyensis is polychromatic, with individuals varying in both overall head-foot coloration and mantle margin color pattern. Females brood stalked egg capsules attached to their shell within the confines of their mantle cavity, and give rise to crawl-away juveniles. Such direct-developing species have the demonstrated capacity for colonizing habitats isolated far from their native ranges and establishing rapidly growing founder populations. Vermetid gastropods are common components of the marine fouling community in warm temperate and tropical waters and, as such, have been tagged as potentially invasive or with a high potential to be invasive in the Pacific Ocean. As vermetids can influence coral growth/composition in the Pacific and have been reported serving as intermediate hosts for blood flukes of loggerhead turtles, such new arrivals in the Florida Keys National Marine Sanctuary are of concern. Growing evidence indicates that artificial reefs can act as permanent way-stations for arriving non-natives, providing nurseries within which populations may grow in an environment with reduced competition compared to native habitats. Consequently, artificial reefs can act as sentinels for the appearance of new species. Ongoing monitoring of the developing molluscan fauna on the artificial reefs of the Florida Keys is necessary to recognize new invasions and identify potential eradication targets, thereby assuring the health of the nearby natural barrier reef.

Non-native molluscan colonizers on deliberately placed shipwrecks in the Florida Keys, with description of a new species of potentially invasive worm-snail (Gastropoda: Vermetidae)

PubMed Central

Granados-Cifuentes, Camila; Rawlings, Timothy A.; Sierwald, Petra; Collins, Timothy M.

2017-01-01

Artificial reefs created by deliberately sinking ships off the coast of the Florida Keys island chain are providing new habitat for marine invertebrates. This newly developing fouling community includes the previously reported invasive orange tube coral Tubastraea coccinea and the non-native giant foam oyster Hyotissa hyotis. New SCUBA-based surveys involving five shipwrecks spanning the upper, middle, and lower Florida Keys, show T. coccinea now also established in the lower Keys and H. hyotis likewise extending to new sites. Two additional mollusks found on the artificial reefs, the amathinid gastropod Cyclothyca pacei and gryphaeid oyster Hyotissa mcgintyi, the latter also common in the natural reef areas, are discussed as potentially non-native. A new species of sessile, suspension-feeding, worm-snail, Thylacodes vandyensis Bieler, Rawlings & Collins n. sp. (Vermetidae), is described from the wreck of the USNS Vandenberg off Key West and discussed as potentially invasive. This new species is compared morphologically and by DNA barcode markers to other known members of the genus, and may be a recent arrival from the Pacific Ocean. Thylacodes vandyensis is polychromatic, with individuals varying in both overall head-foot coloration and mantle margin color pattern. Females brood stalked egg capsules attached to their shell within the confines of their mantle cavity, and give rise to crawl-away juveniles. Such direct-developing species have the demonstrated capacity for colonizing habitats isolated far from their native ranges and establishing rapidly growing founder populations. Vermetid gastropods are common components of the marine fouling community in warm temperate and tropical waters and, as such, have been tagged as potentially invasive or with a high potential to be invasive in the Pacific Ocean. As vermetids can influence coral growth/composition in the Pacific and have been reported serving as intermediate hosts for blood flukes of loggerhead turtles, such new arrivals in the Florida Keys National Marine Sanctuary are of concern. Growing evidence indicates that artificial reefs can act as permanent way-stations for arriving non-natives, providing nurseries within which populations may grow in an environment with reduced competition compared to native habitats. Consequently, artificial reefs can act as sentinels for the appearance of new species. Ongoing monitoring of the developing molluscan fauna on the artificial reefs of the Florida Keys is necessary to recognize new invasions and identify potential eradication targets, thereby assuring the health of the nearby natural barrier reef. PMID:28392984

The effect of species and colony size on the bleaching response of reef-building corals in the Florida Keys during the 2005 mass bleaching event

NASA Astrophysics Data System (ADS)

Brandt, M. E.

2009-12-01

Understanding the variation in coral bleaching response is necessary for making accurate predictions of population changes and the future state of reefs in a climate of increasing thermal stress events. Individual coral colonies, belonging to inshore patch reef communities of the Florida Keys, were followed through the 2005 mass bleaching event. Overall, coral bleaching patterns followed an index of accumulated thermal stress more closely than in situ temperature measurements. Eight coral species ( Colpophyllia natans, Diploria strigosa, Montastraea cavernosa, M. faveolata, Porites astreoides, P. porites, Siderastrea siderea, and Stephanocoenia intersepta), representing >90% of the coral colonies studied, experienced intense levels of bleaching, but responses varied. Bleaching differed significantly among species: Colpophyllia natans and Diploria strigosa were most susceptible to thermal stress, while Stephanocoenia intersepta was the most tolerant. For colonies of C. natans, M. faveolata, and S. siderea, larger colonies experienced more extensive bleaching than smaller colonies. The inshore patch reef communities of the Florida Keys have historically been dominated by large colonies of Montastraea sp. and Colpophyllia natans. These results provide evidence that colony-level differences can affect bleaching susceptibility in this habitat and suggest that the impact of future thermal stress events may be biased toward larger colonies of dominant reef-building species. Predicted increases in the frequency of mass bleaching and subsequent mortality may therefore result in significant structural shifts of these ecologically important communities.

A century of ocean warming on Florida Keys coral reefs: historic in situ observations

USGS Publications Warehouse

Kuffner, Ilsa B.; Lidz, Barbara H.; Hudson, J. Harold; Anderson, Jeffery S.

2015-01-01

There is strong evidence that global climate change over the last several decades has caused shifts in species distributions, species extinctions, and alterations in the functioning of ecosystems. However, because of high variability on short (i.e., diurnal, seasonal, and annual) timescales as well as the recency of a comprehensive instrumental record, it is difficult to detect or provide evidence for long-term, site-specific trends in ocean temperature. Here we analyze five in situ datasets from Florida Keys coral reef habitats, including historic measurements taken by lighthouse keepers, to provide three independent lines of evidence supporting approximately 0.8 °C of warming in sea surface temperature (SST) over the last century. Results indicate that the warming observed in the records between 1878 and 2012 can be fully accounted for by the warming observed in recent decades (from 1975 to 2007), documented using in situ thermographs on a mid-shore patch reef. The magnitude of warming revealed here is similar to that found in other SST datasets from the region and to that observed in global mean surface temperature. The geologic context and significance of recent ocean warming to coral growth and population dynamics are discussed, as is the future prognosis for the Florida reef tract.

KSC-03pd1387

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - A team aboard the Liberty Star secures lines to underwater research equipment being used on an expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. The equipment includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

SEDIMENTARY PETROLOGY OF A DECLINING REEF ECOSYSTEM, FLORIDA REEF TRACT (USA). (R825869)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

Holocene coastal development on the Florida peninsula

USGS Publications Warehouse

Davis, Richard; Hine, Albert C.; Shinn, Eugene A.

1992-01-01

The Florida peninsula contains five distinct coastal sections, each resulting from its own spectrum of coastal processes and sediment availability during a slowly rising, late Holocene sea level. The east coast barrier system is wave-dominated and has a large cuspate foreland (Cape Canaveral) near its middle. The Florida Keys and reef tract represent the only coastal carbonate system in the continental United States. An open-marine mangrove coast characterizes the low-energy, tide-dominated southwest part of the State. The central Gulf barrier system displays a mixed-energy morphology in a microtidal, low-energy setting. The open-coast marsh system of the Big Bend area that is north of the barrier system is also tide dominated, and is developed on a sediment-starved carbonate platform.The oldest preserved coastal Holocene section is the Florida Keys area where, at about 6 to 8 ka, sequences accumulated during the Holocene. Most of the remainder of the peninsular coast is characterized by terrigenous sequences less than 3 ka. The younger sequences accumulated almost exclusively from reworking of older strata without benefit of additional sediment supply from land.

Bathymetry and acoustic backscatter of the mid and outer continental shelf, head of De Soto Canyon, northeastern Gulf of Mexico: data, images, and GIS

USGS Publications Warehouse

Gardner, James V.; Hughes-Clarke, John E.; Mayer, Larry A.; Dartnell, Peter

2003-01-01

The mid to outer continental shelf off Mississippi-Alabama and off northwest Florida were the focus of U.S. Geological Survey (USGS) multibeam echosounder (MBES) mapping cruises in 2000 and 2001, respectively. These areas were mapped to investigate the extent of "deep-water reefs" first suggested by Ludwig and Walton (1957). The reefs off Mississippi and Alabama were initially described in water depths of 60 to 120 m (Ludwig and Walton, 1957) but the 2000 mapping found reef and hardgrounds to be much more extensive than previously thought (Gardner et al., 2001). The persistent trend of reef-like features along the outer shelf of Mississippi-Alabama suggested the trend might continue along the northwest Florida mid and outer shelf so a MBES-mapping effort was mounted in 2001 to test this suggestion. It is critical to determine the accurate location, geomorphology, and types of the ridges and reefs that occur in this region to understand the Quaternary history of the area and to assess their importance as benthic habitats for fisheries. The area known as the "Head of De Soto Canyon" is the large unmapped region between the 2000 and 2001 mapped areas. It was unknown whether the reefs of the Mississippi-Alabama shelf continue eastward into the head of De Soto Canyon and connect with the ridges and reefs mapped on the northwest Florida outer shelf. The existence of carbonate-cemented Quaternary to Holocene sandstones along the western wall of the head of De Soto Canyon (Shipp and Hopkins, 1978; Benson et al., 1997; W.W. Schroeder, personal commun., 2002) is of interest because of the potential benthic habitats they may represent. In the summer of 2002, the USGS, in cooperation with Minerals Management Service (MMS), the University of New Hampshire, and the University of New Brunswick, conducted a MBES survey of the Head of De Soto Canyon Region connecting the 2000 and 2001 mapped regions.

The Camera-Based Assessment Survey System (C-BASS): A towed camera platform for reef fish abundance surveys and benthic habitat characterization in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Lembke, Chad; Grasty, Sarah; Silverman, Alex; Broadbent, Heather; Butcher, Steven; Murawski, Steven

2017-12-01

An ongoing challenge for fisheries management is to provide cost-effective and timely estimates of habitat stratified fish densities. Traditional approaches use modified commercial fishing gear (such as trawls and baited hooks) that have biases in species selectivity and may also be inappropriate for deployment in some habitat types. Underwater visual and optical approaches offer the promise of more precise and less biased assessments of relative fish abundance, as well as direct estimates of absolute fish abundance. A number of video-based approaches have been developed and the technology for data acquisition, calibration, and synthesis has been developing rapidly. Beginning in 2012, our group of engineers and researchers at the University of South Florida has been working towards the goal of completing large scale, video-based surveys in the eastern Gulf of Mexico. This paper discusses design considerations and development of a towed camera system for collection of video-based data on commercially and recreationally important reef fishes and benthic habitat on the West Florida Shelf. Factors considered during development included potential habitat types to be assessed, sea-floor bathymetry, vessel support requirements, personnel requirements, and cost-effectiveness of system components. This regional-specific effort has resulted in a towed platform called the Camera-Based Assessment Survey System, or C-BASS, which has proven capable of surveying tens of kilometers of video transects per day and has the ability to cost-effective population estimates of reef fishes and coincident benthic habitat classification.

Utility of shallow-water ATRIS images in defining biogeologic processes and self-similarity in skeletal scleractinia, Florida reefs

USGS Publications Warehouse

Lidz, B.H.; Brock, J.C.; Nagle, D.B.

2008-01-01

A recently developed remote-sensing instrument acquires high-quality digital photographs in shallow-marine settings within water depths of 15 m. The technology, known as the Along-Track Reef-Imaging System, provides remarkably clear, georeferenced imagery that allows visual interpretation of benthic class (substrates, organisms) for mapping coral reef habitats, as intended. Unforeseen, however, are functions new to the initial technologic purpose: interpr??table evidence for real-time biogeologic processes and for perception of scaled-up skeletal self-similarity of scleractinian microstructure. Florida reef sea trials lacked the grid structure required to map contiguous habitat and submarine topography. Thus, only general observations could be made relative to times and sites of imagery. Degradation of corals was nearly universal; absence of reef fish was profound. However, ???1% of more than 23,600 sea-trial images examined provided visual evidence for local environs and processes. Clarity in many images was so exceptional that small tracks left by organisms traversing fine-grained carbonate sand were visible. Other images revealed a compelling sense, not yet fully understood, of the microscopic wall structure characteristic of scleractinian corals. Conclusions drawn from classifiable images are that demersal marine animals, where imaged, are oblivious to the equipment and that the technology has strong capabilities beyond mapping habitat. Imagery acquired along predetermined transects that cross a variety of geomorphic features within depth limits will ( 1) facilitate construction of accurate contour maps of habitat and bathymetry without need for ground-truthing, (2) contain a strong geologic component of interpreted real-time processes as they relate to imaged topography and regional geomorphology, and (3) allow cost-effective monitoring of regional- and local-scale changes in an ecosystem by use of existing-image global-positioning system coordinates to re-image areas. Details revealed in the modern setting have taphonomic implications for what is often found in the geologic record.

Human enteric viruses in groundwater indicate offshore transport of human sewage to coral reefs of the Upper Florida Keys.

PubMed

Futch, J Carrie; Griffin, Dale W; Lipp, Erin K

2010-04-01

To address the issue of human sewage reaching corals along the main reef of the Florida Keys, samples were collected from surface water, groundwater and coral [surface mucopolysaccharide layers (SML)] along a 10 km transect near Key Largo, FL. Samples were collected semi-annually between July 2003 and September 2005 and processed for faecal indicator bacteria (faecal coliform bacteria, enterococci and Clostridium perfringens) and human-specific enteric viruses (enterovirus RNA and adenovirus DNA) by (RT)-nested polymerase chain reaction. Faecal indicator bacteria concentrations were generally higher nearshore and in the coral SML. Enteric viruses were evenly distributed across the transect stations. Adenoviruses were detected in 37 of 75 samples collected (49.3%) whereas enteroviruses were only found in 8 of 75 samples (10.7%). Both viruses were detected twice as frequently in coral compared with surface water or groundwater. Offshore, viruses were most likely to be found in groundwater, especially during the wet summer season. These data suggest that polluted groundwater may be moving to the outer reef environment in the Florida Keys.

Human enteric viruses in groundwater indicate offshore transport of human sewage to coral reefs of the Upper Florida Keys

USGS Publications Warehouse

Futch, J. Carrie; Griffin, Dale W.; Lipp, Erin K.

2010-01-01

To address the issue of human sewage reaching corals along the main reef of the Florida Keys, samples were collected from surface water, groundwater and coral [surface mucopolysaccharide layers (SML)] along a 10 km transect near Key Largo, FL. Samples were collected semi-annually between July 2003 and September 2005 and processed for faecal indicator bacteria (faecal coliform bacteria, enterococci and Clostridium perfringens) and human-specific enteric viruses (enterovirus RNA and adenovirus DNA) by (RT)-nested polymerase chain reaction. Faecal indicator bacteria concentrations were generally higher nearshore and in the coral SML. Enteric viruses were evenly distributed across the transect stations. Adenoviruses were detected in 37 of 75 samples collected (49.3%) whereas enteroviruses were only found in 8 of 75 samples (10.7%). Both viruses were detected twice as frequently in coral compared with surface water or groundwater. Offshore, viruses were most likely to be found in groundwater, especially during the wet summer season. These data suggest that polluted groundwater may be moving to the outer reef environment in the Florida Keys.

Coral Reef Biological Criteria: Using Clean Water Act to Protect a National Treasure

EPA Science Inventory

A collaborative Environmental Protection Agency effort is underway to elucidate the technical aspects of coral reef biocriteria implementation. A stony coral rapid bioassessment protocol has been introduced and applied in the Florida Keys and U.S. Virgin Islands, where several in...

Connectivity of the South Florida Coral Reef Ecosystem to Upstream Waters of the Western Caribbean and Gulf of Mexico

NASA Astrophysics Data System (ADS)

Johns, E. M.; Smith, R. H.; Lamkin, J. T.; Birbriezca, L. C.; Vasquez-Yeomans, L.; Cordero, E. S.

2008-05-01

The coastal waters of south Florida, including the coral reefs of NOAA's Florida Keys National Marine Sanctuary (FKNMS), are directly connected by means of strong ocean currents with upstream waters of the western Caribbean Sea and the Gulf of Mexico. The Caribbean Current and the Loop Current provide a rapid conduit for transport from Mexican and Belizean coral reefs, located off the eastern shore of the Yucatan Peninsula, to nearshore regions of northern Cuba, Florida, and the Bahamas. Interdisciplinary cruise data collected in August 2002, March 2006 and January 2007 aboard the NOAA Ship Gordon Gunter, in combination with satellite-tracked surface drifter trajectories and remote sensing imagery, clearly show the highly variable and dynamic nature of the regional current regimes and provide a means of quantifying the potential pathways and transport rates of the coastal waters and their biological and chemical constituents from one region to another. Results from these cruises and ancillary data show that the study areas are connected with rapid transport time scales, and that frontal eddies and gyres play an important role in establishing the time and length scales of this connectivity. Such direct physical connectivity between the coral reef biota of these geographically separated spawning grounds via ocean currents may have an important influence on the degree of biological connectivity between regional larval populations. Initial analyses of ichthyoplankton surveys and inshore collections along the Yucatan mesoamerican reef suggest large scale variability in both local recruitment and large scale spatial distribution. Despite strong northward flowing currents, inshore collections indicate that local recruitment in some areas is strongly influenced by small scale circulation patterns. However, the distribution of spawning aggregations along the Yucatan coast suggests a larger role for the Caribbean Current. Determining the interactions between the larger scale circulation patterns and the smaller scale biological processes is a key research objective for understanding the observed regional population connections.

THE CONDITION OF CORAL REEFS IN SOUTH FLORIDA (2000) USING CORAL DISEASE AND BLEACHING AS INDICATORS

EPA Science Inventory

The destruction for coral reef habitats is occurring at unprecedented levels. Coral disease epizootics in the Southwestern Atlantic have lead to coral replacement by turf algae, prompting a call to classify some coral species as endangered. In addition, a massive bleaching event ...

INCIDENCE OF CORAL DISEASE IN THE FLORIDA KEYS AND DRY TORTUGAS (ABSTRACT)

EPA Science Inventory

Disease in corals is one factor that has been implicated in serious declines in the ecological condition of coral reefs. In particular, coral reefs in the Western Atlantic Province have undergone large-scale and consistent ecological changes during the last two decades. Few studi...

INFLUENCE OF LIGHT ON BACTERIOPLANKTON PRODUCTION AND RESPIRATION IN A SUBTROPICAL CORAL REEF

EPA Science Inventory

The influence of sunlight on bacterioplankton production (14C-leucine (Leu) and 3H-thymidine (TdR) incorporation; changes in cell abundances) and O2 consumption was investigated in a shallow subtropical coral reef located near Key Largo, Florida. Quartz (light) and opaque (dark) ...

KSC-02pd1535

NASA Image and Video Library

2002-10-15

KENNEDY SPACE CENTER, FLA. -- Sonar mapping equipment lies on the deck of the Liberty Star, one of NASA's solid rocket booster retrieval ships. The equipment will be attached to the ship's hull for an eight-day expedition surveying deep-water coral reefs on the Oculina Banks off eastern Florida. NASA joins the National Oceanic and Atmospheric Administration (NOAA) and other ocean scientists for the sophisticated mapping system that will provide the first high-resolution, three-dimensional map of the Oculina Banks. The survey results are expected to guide another expedition in Spring 2003, using NASA's ship, when the reef fish spawn. Also used will be NASA's underwater robot and an acoustic hydrophone system for listening to fish and vessel noise. Dive sites will be chosen based on the new charts.

The Geology of the Florida Keys.

ERIC Educational Resources Information Center

Shinn, Eugene A.

1988-01-01

Describes some of the ancient geologic history of the Florida Keys from Key Largo to Key West including the effects of glaciers, sea level rise, reef distribution, spurs and grooves, backstepping and ecological zonation, growth rates and erosion. Predicts future changes in this area. (CW)

Are the Keys loved to death? A study of diver specialization levels and preferences in the Florida Keys

Treesearch

Shona Paterson; David K. Loomis

2010-01-01

This paper presents research conducted for the Florida Reef Resilience Program on nonresident recreational SCUBA divers in three zones of the Florida Keys. When divers were segmented into specialization subgroups for analysis, divers in different subgroups tended to use different geographic locations. These results suggest differences in user preferences; yet when...

KSC-03pd1389

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - A view inside the pilot house of the Liberty Star. The ship is taking part in an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks. The banks are a marine protected area, 20 miles offshore of the east coast of Florida. The equipment includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1381

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - Underwater equipment sits on the deck of the Liberty Star, which will be the site of an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. A team of scientists will deploy an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1390

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - The Liberty Star makes its way along the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. The ship is taking part in an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks. Equipment being used for the research includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1382

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - Underwater equipment is checked on the deck of the Liberty Star, which will be the site of an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. A team of scientists will deploy an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1386

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - Underwater research equipment slowly sinks into the water. An undersea expedition is underway to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. The equipment includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries and will take place onboard the Liberty Star. The ship departed from Port Canaveral April 29 and will return May 9.

REGIONAL MONITORING OF CORAL CONDITION IN THE FLORIDA KEYS

EPA Science Inventory

Fisher, William S. and Deborah L. Santavy. 2004. Regional Monitoring of Coral Condition in Florida Keys (Abstract). Presented at the Monitoring Science and Technology Symposium, 20-24 September 2004, Denver, CO. 1 p. (ERL,GB R1020).

Coral reefs have experienced unpreceden...

Benthic habitat classification in Lignumvitae Key Basin, Florida Bay, using the U.S. Geological Survey Along-Track Reef Imaging System (ATRIS)

USGS Publications Warehouse

Reich, C.D.; Zawada, D.G.; Thompson, P.R.; Reynolds, C.E.; Spear, A.H.; Umberger, D.K.; Poore, R.Z.

2011-01-01

The Comprehensive Everglades Restoration Plan (CERP) funded in partnership between the U.S. Army Corps of Engineers, South Florida Water Management District, and other Federal, local and Tribal members has in its mandate a guideline to protect and restore freshwater flows to coastal environments to pre-1940s conditions (CERP, 1999). Historic salinity data are sparse for Florida Bay, so it is difficult for water managers to decide what the correct quantity, quality, timing, and distribution of freshwater are to maintain a healthy and productive estuarine ecosystem. Proxy records of seasurface temperature (SST) and salinity have proven useful in south Florida. Trace-element chemistry on foraminifera and molluscan shells preserved in shallow-water sediments has provided some information on historical salinity and temperature variability in coastal settings, but little information is available for areas within the main part of Florida Bay (Brewster-Wingard and others, 1996). Geochemistry of coral skeletons can be used to develop subannually resolved proxy records for SST and salinity. Previous studies suggest corals, specifically Solenastrea bournoni, present in the lower section of Florida Bay near Lignumvitae Key, may be suitable for developing records of SST and salinity for the past century, but the distribution and species composition of the bay coral community have not been well documented (Hudson and others, 1989; Swart and others, 1999). Oddly, S. bournoni thrives in the study area because it can grow on a sandy substratum and can tolerate highly turbid water. Solenastrea bournoni coral heads in this area should be ideally located to provide a record (~100-150 years) of past temperature and salinity variations in Florida Bay. The goal of this study was to utilize the U.S. Geological Survey's (USGS) Along-Track Reef Imaging System (ATRIS) capability to further our understanding of the abundance, distribution, and size of corals in the Lignumvitae Key Basin. The study area was subdivided into four areas whereby corals and other benthic habitats were classified based on ATRIS imagery.

50 CFR 223.208 - Corals.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Sanctuaries Act 16 U.S.C. 1431 et seq. NOAA, NOS Coral Reef Conservation Act 16 U.S.C. 6406 Commandant, U.S... Management; Coral Reef RestorationFL Statute § 390.0558 Florida Fish and Wildlife Conservation Commission... 50 Wildlife and Fisheries 10 2012-10-01 2012-10-01 false Corals. 223.208 Section 223.208 Wildlife...

50 CFR 223.208 - Corals.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Sanctuaries Act 16 U.S.C. 1431 et seq. NOAA, NOS Coral Reef Conservation Act 16 U.S.C. 6406 Commandant, U.S... Management; Coral Reef RestorationFL Statute § 390.0558 Florida Fish and Wildlife Conservation Commission... 50 Wildlife and Fisheries 10 2014-10-01 2014-10-01 false Corals. 223.208 Section 223.208 Wildlife...

50 CFR 223.208 - Corals.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Sanctuaries Act 16 U.S.C. 1431 et seq. NOAA, NOS Coral Reef Conservation Act 16 U.S.C. 6406 Commandant, U.S... Management; Coral Reef RestorationFL Statute § 390.0558 Florida Fish and Wildlife Conservation Commission... 50 Wildlife and Fisheries 10 2013-10-01 2013-10-01 false Corals. 223.208 Section 223.208 Wildlife...

50 CFR 223.208 - Corals.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Act 16 U.S.C. 1431 et seq. NOAA, NOS Coral Reef Conservation Act 16 U.S.C. 6406 Commandant, U.S. Coast...; Coral Reef RestorationFL Statute § 390.0558 Florida Fish and Wildlife Conservation Commission Fish and... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Corals. 223.208 Section 223.208 Wildlife...

50 CFR 223.208 - Corals.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Sanctuaries Act 16 U.S.C. 1431 et seq. NOAA, NOS Coral Reef Conservation Act 16 U.S.C. 6406 Commandant, U.S... Management; Coral Reef RestorationFL Statute § 390.0558 Florida Fish and Wildlife Conservation Commission... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Corals. 223.208 Section 223.208 Wildlife...

USE OF OYSTER HABITAT BY REEF-RESIDENT FISHES AND DECAPOD CRUSTACEANS IN THE CALOOSAHATCHEE ESTUARY, FLORIDA

EPA Science Inventory

Habitat suitability of oyster reefs for fishes and decapod crustaceans was examined monthly at three sites in the lower Caloosahatchee Estuary. At each site, 1-m2 lift nets containing approximately 5 liters (volume displacement) of oyster clumps were deployed for a period of two ...

Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida

PubMed Central

Campbell, Alexandra M; Fleisher, Jay; Sinigalliano, Christopher; White, James R; Lopez, Jose V

2015-01-01

Coastal waters adjacent to populated southeast Florida possess different habitats (reefs, oceanic inlets, sewage outfalls) that may affect the composition of their inherent microbiomes. To determine variation according to site, season, and depth, over the course of 1 year, we characterized the bacterioplankton communities within 38 nearshore seawater samples derived from the Florida Area Coastal Environment (FACE) water quality survey. Six distinct coastal locales were profiled – the Port Everglades and Hillsboro Inlets, Hollywood and Broward wastewater outfalls, and associated reef sites using culture-independent, high-throughput pyrosequencing of the 16S rRNA V4 region. More than 227,000 sequences helped describe longitudinal taxonomic profiles of marine bacteria and archaea. There were 4447 unique operational taxonomic units (OTUs) identified with a mean OTU count of 5986 OTUs across all sites. Bacterial taxa varied significantly by season and by site using weighted and unweighted Unifrac, but depth was only supported by weighted Unifrac, suggesting a change due to presence/absence of certain OTUs. Abundant microbial taxa across all samples included Synechococcus, Pelagibacteraceae, Bacteroidetes, and various Proteobacteria. Unifrac analysis confirmed significant differences at inlet sites relative to reef and outfalls. Inlet-based bacterioplankton significantly differed in greater abundances of Rhodobacteraceae and Cryomorphaceae, and depletion of SAR406 sequences. This study also found higher counts of Firmicutes, Chloroflexi, and wastewater associated SBR1093 bacteria at the outfall and reef sites compared to inlet sites. This study profiles local bacterioplankton populations in a much broader context, beyond culturing and quantitative PCR, and expands upon the work completed by the National Oceanic and Atmospheric Administration FACE program. PMID:25740409

ACHP | News

Science.gov Websites

reefs in North America, supporting complex ecosystems of marine life that have thrived generation after Key West at the Dr. Nancy Foster Environmental Complex in Key West. Credit: Craig Wanous, Florida Keys Environmental Complex in Key West. Credit: Craig Wanous, Florida Keys National Marine Sanctuary. The National

Holocene core logs and site methods for modern reef and head-coral cores - Dry Tortugas National Park, Florida

USGS Publications Warehouse

Hickey, Todd D.; Reich, Christopher D.; DeLong, Kristine L.; Poore, Richard Z.; Brock, John C.

2013-01-01

The Dry Tortugas are a series of islands, banks, and channels on a carbonate platform off the west end of the Florida Keys. Antecedent topography of the Dry Tortugas reflects carbonate accumulations of the last interglacial (marine isotope substage 5e, ~ 125,000 years ago, ka) when sea level was ~ 6 to 7 meters (m) higher than present (Schrag and others, 2002). The substage 5e surface was subsequently lithified and modified during subaerial exposure associated with lower sea level from ~ 120 ka to 8 ka. The lithified late Pleistocene carbonates are known as the Key Largo Limestone, a coral reef (Hoffmeister and Multer, 1964; Multer and others, 2002), and the Miami Limestone, a tidal-bar oolite (Sanford, 1909; Hoffmeister, 1974). The Holocene and modern sediments and reefs of the Dry Tortugas then accreted during the rise of sea level associated with the end of the last glacial and the start of the current interglacial (marine isotope Stage 1). With the exception of a half dozen or so islands, the Dry Tortugas region has been submerged for approximately 8,000 years, allowing conditions suitable for coral reef formation once again. The Holocene reef accumulation varies in thickness due to the antecedent topography. The reefs are composed of massive head corals such as species of Montastraea, Siderastrea, and Diploria (Swart and others, 1996; Cohen and McConnaughey, 2003) and rest atop the Pleistocene Key Largo Limestone high (Shinn and others, 1977). The coral reefs within the Dry Tortugas represent a windward reef margin relative to dominant wind and wave energies (Hine and Mullins, 1983; Mallinson and others, 1997; Mallinson and others, 2003).

Analysis of coral mucus as an improved medium for detection of enteric microbes and for determining patterns of sewage contamination in reef environments

USGS Publications Warehouse

Lipp, Erin K.; Griffin, Dale W.

2004-01-01

Traditional fecal indicator bacteria are often subject to a high degree of die-off and dilution in tropical marine waters, particularly in offshore areas such as coral reefs. Furthermore, these microbes are often not associated with human waste, and their presence may not be indicative of health risk. To address the offshore extent of wastewater contamination in the Florida Keys reef tract, we assayed coral surfaces for the presence of human-specific enteric viruses. The overlying water column and surface mucopolysaccharide (mucus) layers from scleractinian corals were sampled from three stations along a nearshore-to-offshore transect beginning at Long Key in the middle Florida Keys, USA. Samples were assayed for standard bacterial water quality indicators (fecal coliform bacteria and enterococci) and for human enteroviruses by direct reverse transcriptase-polymerase chain reaction (RT-PCR). The concentration of the bacterial indicators was greatest at the nearshore station in both the water column and corals, and decreased with distance from shore; no indicator bacteria were detected at the offshore station. Whereas human enteroviruses were not detected in any of the water column samples, they were detected in 50–80% of coral mucus samples at each station. These data provide evidence that human sewage is impacting the reef tract up to ~6.5 km from shore in the middle Florida Keys and that coral mucus is an efficient trap for viral markers associated with anthropogenic pollution.

Late Holocene Coral Growth Records from the Southeast Florida Continental Reef Tract, USA

NASA Astrophysics Data System (ADS)

Modys, A.; Oleinik, A. E.; Manzello, D.; Enochs, I.; Kolodziej, G.; Carroll, R. J.

2017-12-01

The southeast Florida continental reef tract provides a unique opportunity to examine the past and present response of marginal coral reefs to environmental and climatic change. Here we compare growth records of radiometrically dated late Holocene (3.1 to 1.9 ka) and modern corals using cores extracted from the common reef-building coral species Pseudodiploria strigosa. In 2015 and 2016, a total of 4 modern and 5 subfossil cores were collected from two shallow-water sites (3.0 and 4.5 m depths) on the nearshore ridge complex (NRC) offshore northern Broward County, Florida. Using 3-D computerized tomography, skeletal extension rates were estimated from the thickness of high- and low-density growth bands and combined with density measurements to yield calcification rates. Our results indicate that mean linear extension, density, and calcification were significantly lower in the late Holocene corals (0.52±0.01 cm yr-1; 1.05±0.02 g cm-3; 0.55±0.01 g cm-2 yr-1) compared to today (0.64±0.02 cm yr-1; 1.20±0.02 g cm-3; 0.78±0.04 g cm-2 yr-1), despite shallower local water depths in the late Holocene. Based on the radiometric ages and presence of distinct burial notches on the subfossil corals, we suggest that late Holocene P. strigosa growth at this site was potentially suppressed by reduced sea surface temperatures (SSTs) and/or increased burial compared to present conditions.

Changes in Reef Fish Abundances Associated with the Introduction of Indo-Pacific Lionfish to the Florida Keys National Marine Sanctuary: a Twenty Year Time Series.

NASA Astrophysics Data System (ADS)

Hepner, M.; Muller-Karger, F. E.; Gittings, S.; Stallings, C.

2016-02-01

The Marine Biodiversity Observation Network (MBON) is a partnership between academic, private, and government researchers seeking to understand how marine biodiversity changes over long periods of time. In this context, a study of the multi-agency Reef Visual Census (RVC) data, collected over twenty years in the Florida Keys National Marine Sanctuary (FKNMS), was analyzed to measure possible changes in reef fish abundances as a result of possible predation by lionfish predation or due to related trophic cascading. Lionfish were first sighted in the FKNMS in January 2009, with abundances and frequency of occurrence increasing three to six fold throughout the sanctuary by 2011. Their high consumption rates of smaller fish, coupled with their rapidly increasing densities may be having a significant effect on coral reef fish communities. The study compares the natural variability in reef fish abundances from 1994-2009 in the FKNMS, 15 years prior to the first lionfish detected in the sanctuary, to changes in reef fish abundances 5 years after the invasion. The MBON project also aims to develop environmental DNA (eDNA) technology for conducting biodiversity assessments. eDNA is an emerging technique that seeks to quantify biodiversity in an area by obtaining genetic material directly from environmental samples (soil, sediment, water, etc.) without any obvious signs of biological source material. All marine organisms shed DNA into their surrounding habitat, leaving a "fingerprint." Similar to forensic science, the DNA can be collected from seawater and analyzed to determine what species were recently present. The MBON team is evaluating whether eDNA can be used to adequately monitor reef fish biodiversity in coral reef ecosystems. We will compare species detected in our samples to the taxonomic composition of reef fish communities at the sample site as recorded over the past twenty years in the Reef Visual Census data.

Biological Communities and Geomorphology of Patch Reefs in Biscayne National Park, Florida, U.S.A.

USGS Publications Warehouse

Kuffner, Ilsa B.; Brock, John C.; Grober-Dunsmore, Rikki; Hickey, T. Don; Bonito, Victor; Bracone, Jeremy E.; Wright, C. Wayne

2008-01-01

Coral reef ecosystem management benefits from continual, quantitative assessment of the resources being managed, plus assessment of factors that affect distribution patterns of organisms in the ecosystem. In this study, we investigated the relationships among physical, benthic, and fish variables in effort to help explain the distribution patterns of ecologically and economically important species on twelve patch reefs within Biscayne National Park (BNP), Florida, U.S.A. We visited 196 randomly-located sampling stations across twelve shallow (< 10m) patch reefs, using SCUBA to conduct our surveys. We measured physical variables (e.g., substratum type), estimated the percent cover of benthic community members (e.g., coral, algae), and counted and estimated mean size for each fish species observed. We also used high-density bathymetric data collected remotely via airborne laser surveying (Experimental Advanced Airborne Research Lidar (EAARL)) to calculate rugosity (bumpiness) of the reef habitat. Here we present our findings visually by graphing our quantitative community and physical structure data simultaneously in a GIS map format. You will see that biological organisms arrange themselves on each patch reef in a non-random manner. For example, many species of fish prefer to locate themselves in areas of the reef where the rugosity index is high. Rugose parts of the reef provide them with good hiding places from predators. These maps (and the data used to create them) are permanent records of the status of reef resources found on these twelve patch reefs in BNP as of September, 2003. The survey data found in the shapefile located on this CD product includes benthic percent cover data for algae, coral, encrusting invertebrates, and substratum type, in addition to gorgonian abundance and volume, total fish abundance and species richness, and specific counts for Acanthurids (surgeonfish), Scarids (parrotfish), Lutjanids (snappers), Haemulids (grunts), Serranids (groupers), and Pomacentrids (damselfish).

UV ATTENUATION NEAR CORAL REEFS IN THE FLORIDA KEYS: LIGHT ABSORPTION BY CDOM AND PARTICLES

EPA Science Inventory

We have investigated the roles of chromophoric dissolved organic matter (CDOM) and suspended particles in the attenuation of UV radiation in the middle and lower regions of the Florida Keys. Extended exposure to UV radiation, along with elevated sea surface temperatures, impairs...

ROLE OF DOM PHOTOREACTIONS IN CONTROLLING UV EXPOSURE OF CORAL ASSEMBLAGES IN THE FLORIDA KEYS

EPA Science Inventory

Recent studies have indicated that solar LTV radiation is a significant stressor of coral assemblages in tropical and subtropical marine environments. Here evidence is presented that UV exposure of coral reefs in the Florida Keys near Key West is controlled by the colored compone...

KSC-02pd1539

NASA Image and Video Library

2002-10-15

KENNEDY SPACE CENTER, FLA. -- A diver helps lower sonar mapping equipment into the water alongside the Liberty Star, one of NASA's solid rocket booster retrieval ships. The equipment will be attached to the ship's hull for an eight-day expedition surveying deep-water coral reefs on the Oculina Banks off eastern Florida. NASA joins the National Oceanic and Atmospheric Administration (NOAA) and other ocean scientists for the sophisticated mapping system that will provide the first high-resolution, three-dimensional map of the Oculina Banks. The survey results are expected to guide another expedition in Spring 2003, using NASA's ship, when the reef fish spawn. Also used will be NASA's underwater robot and an acoustic hydrophone system for listening to fish and vessel noise. Dive sites will be chosen based on the new charts.

KSC-02pd1540

NASA Image and Video Library

2002-10-15

KENNEDY SPACE CENTER, FLA. -- A diver helps lower sonar mapping equipment into the water alongside the Liberty Star, one of NASA's solid rocket booster retrieval ships. The equipment will be attached to the ship's hull for an eight-day expedition surveying deep-water coral reefs on the Oculina Banks off eastern Florida. NASA joins the National Oceanic and Atmospheric Administration (NOAA) and other ocean scientists for the sophisticated mapping system that will provide the first high-resolution, three-dimensional map of the Oculina Banks. The survey results are expected to guide another expedition in Spring 2003, using NASA's ship, when the reef fish spawn. Also used will be NASA's underwater robot and an acoustic hydrophone system for listening to fish and vessel noise. Dive sites will be chosen based on the new charts.

KSC-02pd1537

NASA Image and Video Library

2002-10-15

KENNEDY SPACE CENTER, FLA. -- Workers on the deck of the Liberty Star, one of NASA's solid rocket booster retrieval ships, help guide sonar mapping equipment toward the side of the ship. The equipment will be attached to the ship's hull for an eight-day expedition surveying deep-water coral reefs on the Oculina Banks off eastern Florida. NASA joins the National Oceanic and Atmospheric Administration (NOAA) and other ocean scientists for the sophisticated mapping system that will provide the first high-resolution, three-dimensional map of the Oculina Banks. The survey results are expected to guide another expedition in Spring 2003, using NASA's ship, when the reef fish spawn. Also used will be NASA's underwater robot and an acoustic hydrophone system for listening to fish and vessel noise. Dive sites will be chosen based on the new charts.

Timing and locations of reef fish spawning off the southeastern United States

PubMed Central

Heyman, William D.; Karnauskas, Mandy; Kobara, Shinichi; Smart, Tracey I.; Ballenger, Joseph C.; Reichert, Marcel J. M.; Wyanski, David M.; Tishler, Michelle S.; Lindeman, Kenyon C.; Lowerre-Barbieri, Susan K.; Switzer, Theodore S.; Solomon, Justin J.; McCain, Kyle; Marhefka, Mark; Sedberry, George R.

2017-01-01

Managed reef fish in the Atlantic Ocean of the southeastern United States (SEUS) support a multi-billion dollar industry. There is a broad interest in locating and protecting spawning fish from harvest, to enhance productivity and reduce the potential for overfishing. We assessed spatiotemporal cues for spawning for six species from four reef fish families, using data on individual spawning condition collected by over three decades of regional fishery-independent reef fish surveys, combined with a series of predictors derived from bathymetric features. We quantified the size of spawning areas used by reef fish across many years and identified several multispecies spawning locations. We quantitatively identified cues for peak spawning and generated predictive maps for Gray Triggerfish (Balistes capriscus), White Grunt (Haemulon plumierii), Red Snapper (Lutjanus campechanus), Vermilion Snapper (Rhomboplites aurorubens), Black Sea Bass (Centropristis striata), and Scamp (Mycteroperca phenax). For example, Red Snapper peak spawning was predicted in 24.7–29.0°C water prior to the new moon at locations with high curvature in the 24–30 m depth range off northeast Florida during June and July. External validation using scientific and fishery-dependent data collections strongly supported the predictive utility of our models. We identified locations where reconfiguration or expansion of existing marine protected areas would protect spawning reef fish. We recommend increased sampling off southern Florida (south of 27° N), during winter months, and in high-relief, high current habitats to improve our understanding of timing and location of reef fish spawning off the southeastern United States. PMID:28264006

KSC-03pd1385

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - A team onboard the Liberty Star, the NASA Space Shuttle support ship operated by United Space Alliance, get ready to lower underwater research equipment into the water. An undersea expedition is underway to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. The equipment includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1384

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - Underwater research equipment is prepared for immersion from the Liberty Star, the NASA Space Shuttle support ship operated by United Space Alliance. It is being used on an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. The equipment includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1377

NASA Image and Video Library

2003-04-29

KENNEDY SPACE CENTER, FLA. - Pictured is equipment that will be used on an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. Scientists on the team will be deploying an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS). Dr. Grant Gilmore was co-principle investigator of the PAMS, originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries and will take place onboard the Liberty Star. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1383

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - John Reed, co-principal investigator, Harbor Branch Oceanographic Institution, points to the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. A team of scientists will deploy an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), on an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks. The PAMS was originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries and will take place onboard the Liberty Star. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1388

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - A view from inside the pilot house of the Liberty Star overlooks the stern where a team secures lines to underwater research equipment being used on an expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks. The banks are a marine protected area, 20 miles offshore of the east coast of Florida. The equipment includes an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS), originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

Soundscapes from a Tropical Eastern Pacific reef and a Caribbean Sea reef

NASA Astrophysics Data System (ADS)

Staaterman, E.; Rice, A. N.; Mann, D. A.; Paris, C. B.

2013-06-01

Underwater soundscapes vary due to the abiotic and biological components of the habitat. We quantitatively characterized the acoustic environments of two coral reef habitats, one in the Tropical Eastern Pacific (Panama) and one in the Caribbean (Florida Keys), over 2-day recording durations in July 2011. We examined the frequency distribution, temporal variability, and biological patterns of sound production and found clear differences. The Pacific reef exhibited clear biological patterns and high temporal variability, such as the onset of snapping shrimp noise at night, as well as a 400-Hz daytime band likely produced by damselfish. In contrast, the Caribbean reef had high sound levels in the lowest frequencies, but lacked clear temporal patterns. We suggest that acoustic measures are an important element to include in reef monitoring programs, as the acoustic environment plays an important role in the ecology of reef organisms at multiple life-history stages.

Quantifying and valuing potential climate change impacts on coral reefs in the United States: comparison of two scenarios.

PubMed

Lane, Diana R; Ready, Richard C; Buddemeier, Robert W; Martinich, Jeremy A; Shouse, Kate Cardamone; Wobus, Cameron W

2013-01-01

The biological and economic values of coral reefs are highly vulnerable to increasing atmospheric and ocean carbon dioxide concentrations. We applied the COMBO simulation model (COral Mortality and Bleaching Output) to three major U.S. locations for shallow water reefs: South Florida, Puerto Rico, and Hawaii. We compared estimates of future coral cover from 2000 to 2100 for a "business as usual" (BAU) greenhouse gas (GHG) emissions scenario with a GHG mitigation policy scenario involving full international participation in reducing GHG emissions. We also calculated the economic value of changes in coral cover using a benefit transfer approach based on published studies of consumers' recreational values for snorkeling and diving on coral reefs as well as existence values for coral reefs. Our results suggest that a reduced emissions scenario would provide a large benefit to shallow water reefs in Hawaii by delaying or avoiding potential future bleaching events. For Hawaii, reducing emissions is projected to result in an estimated "avoided loss" from 2000 to 2100 of approximately $10.6 billion in recreational use values compared to a BAU scenario. However, reducing emissions is projected to provide only a minor economic benefit in Puerto Rico and South Florida, where sea-surface temperatures are already close to bleaching thresholds and coral cover is projected to drop well below 5% cover under both scenarios by 2050, and below 1% cover under both scenarios by 2100.

Quantifying and Valuing Potential Climate Change Impacts on Coral Reefs in the United States: Comparison of Two Scenarios

PubMed Central

Lane, Diana R.; Ready, Richard C.; Buddemeier, Robert W.; Martinich, Jeremy A.; Shouse, Kate Cardamone; Wobus, Cameron W.

2013-01-01

The biological and economic values of coral reefs are highly vulnerable to increasing atmospheric and ocean carbon dioxide concentrations. We applied the COMBO simulation model (COral Mortality and Bleaching Output) to three major U.S. locations for shallow water reefs: South Florida, Puerto Rico, and Hawaii. We compared estimates of future coral cover from 2000 to 2100 for a “business as usual” (BAU) greenhouse gas (GHG) emissions scenario with a GHG mitigation policy scenario involving full international participation in reducing GHG emissions. We also calculated the economic value of changes in coral cover using a benefit transfer approach based on published studies of consumers' recreational values for snorkeling and diving on coral reefs as well as existence values for coral reefs. Our results suggest that a reduced emissions scenario would provide a large benefit to shallow water reefs in Hawaii by delaying or avoiding potential future bleaching events. For Hawaii, reducing emissions is projected to result in an estimated “avoided loss” from 2000 to 2100 of approximately $10.6 billion in recreational use values compared to a BAU scenario. However, reducing emissions is projected to provide only a minor economic benefit in Puerto Rico and South Florida, where sea-surface temperatures are already close to bleaching thresholds and coral cover is projected to drop well below 5% cover under both scenarios by 2050, and below 1% cover under both scenarios by 2100. PMID:24391717

FIELD OBSERVATIONS OF THE ECOLOGY AND HABITS OF MANGROVE RIVULUS (RIVULUS MARMORATUS) IN BELIZE AND FLORIDA

EPA Science Inventory

This report provides a synopsis of field studies of Rivulus marmaratus from two population surveys of mangrove islands adjacent to the Belize barrier reef and observations made over fifteen years at several sites in south Florida. his small, cryptically colored killifish is the o...

Spatial and Temporal Variability of Solar Ultraviolet Exposure of Coral Assemblages in the Florida Keys: Importance of Colored Dissolved Organic Matter

EPA Science Inventory

Solar UV radiation can have deleterious effects on coral assemblages in tropical and subtropical marine environments. We present evidence that UV exposure of coral reefs in the Florida Keys is controlled primarily by chromophoric dissolved organic matter (CDOM) in waters overlyin...

Fitness consequences of habitat variability, trophic position, and energy allocation across the depth distribution of a coral-reef fish

NASA Astrophysics Data System (ADS)

Goldstein, E. D.; D'Alessandro, E. K.; Sponaugle, S.

2017-09-01

Environmental clines such as latitude and depth that limit species' distributions may be associated with gradients in habitat suitability that can affect the fitness of an organism. With the global loss of shallow-water photosynthetic coral reefs, mesophotic coral ecosystems ( 30-150 m) may be buffered from some environmental stressors, thereby serving as refuges for a range of organisms including mobile obligate reef dwellers. Yet habitat suitability may be diminished at the depth boundary of photosynthetic coral reefs. We assessed the suitability of coral-reef habitats across the majority of the depth distribution of a common demersal reef fish ( Stegastes partitus) ranging from shallow shelf (SS, <10 m) and deep shelf (DS, 20-30 m) habitats in the Florida Keys to mesophotic depths (MP, 60-70 m) at Pulley Ridge on the west Florida Shelf. Diet, behavior, and potential energetic trade-offs differed across study sites, but did not always have a monotonic relationship with depth, suggesting that some drivers of habitat suitability are decoupled from depth and may be linked with geographic location or the local environment. Feeding and diet composition differed among depths with the highest consumption of annelids, lowest ingestion of appendicularians, and the lowest gut fullness in DS habitats where predator densities were highest and fish exhibited risk-averse behavior that may restrict foraging. Fish in MP environments had a broader diet niche, higher trophic position, and higher muscle C:N ratios compared to shallower environments. High C:N ratios suggest increased tissue lipid content in fish in MP habitats that coincided with higher investment in reproduction based on gonado-somatic index. These results suggest that peripheral MP reefs are suitable habitats for demersal reef fish and may be important refuges for organisms common on declining shallow coral reefs.

Environmental Assessment for Airfield Safety and Drainage Improvements at Patrick Air Force Base, Florida

DTIC Science & Technology

2011-12-22

dunes , barrier islands, and coral reefs, as well as the fish and wildlife using those habitats. The Secretary of Commerce delegated the...and dunes Florida Department of Environmental Protection (FDEP), Air Force Florida Statutes, Section 373.428 Federal Consistency When an...marshes, and coastal dunes , etc. 3.1.3.2 Migratory Birds PAFB is located along one of the major migratory flyways for neo-tropical migrants that

Dispersal capacity and genetic relatedness in Acropora cervicornis on the Florida Reef Tract

NASA Astrophysics Data System (ADS)

Drury, Crawford; Paris, Claire B.; Kourafalou, Vassiliki H.; Lirman, Diego

2018-06-01

Sexual reproduction in scleractinian corals is a critical component of species recovery, fostering population connectivity and enhancing genetic diveristy. The relative contribution of sexual reproduction to both connectivity and diversity in Acropora cervicornis may be variable due to this species' capacity to reproduce effectively by fragmentation. Using a biophysical model and genomic data in this threatened species, we construct potential connectivity pathways on the Florida Reef Tract (FRT) and compare them to inferred migration rates derived from next-generation sequencing, using a link and node-based approach. Larval connectivity on the FRT can be divided into two zones: the northern region, where most transport is unidirectional to the north with the Florida Current, and the southern region that is more dynamic and exhibits complex spatial patterns. These biophysical linkages are poorly correlated with genetic connectivity patterns, which resolve many reciprocal connections and suggest a less sparse network. These results are difficult to reconcile with genetic data which indicate that individual reefs are diverse, suggesting important contributions of sexual reproduction and recruitment. Larval connectivity models highlight potential resources for recovery, such as areas with high larval export like the Lower Keys, or areas that are well connected to most other regions on the FRT, such as the Dry Tortugas.

Effects of EMF emissions from undersea electric cables on coral reef fish.

PubMed

Kilfoyle, Audie K; Jermain, Robert F; Dhanak, Manhar R; Huston, Joseph P; Spieler, Richard E

2018-01-01

The objective of this study was to determine if electromagnetic field (EMF) emissions from undersea power cables impacted local marine life, with an emphasis on coral reef fish. The work was done at the South Florida Ocean Measurement Facility of Naval Surface Warfare Center in Broward County, Florida, which has a range of active undersea detection and data transmission cables. EMF emissions from a selected cable were created during non-destructive visual fish surveys on SCUBA. During surveys, the transmission of either alternating current (AC), direct current (DC), or none (OFF) was randomly initiated by the facility at a specified time. Visual surveys were conducted using standardized transect and point-count methods to acquire reef fish abundances and species richness prior to and immediately after a change in transmission frequency. The divers were also tasked to note the reaction of the reef fish to the immediate change in EMF during a power transition. In general, analysis of the data did not find statistical differences among power states and any variables. However, this may be a Type II error as there are strong indications of a potential difference of a higher abundance of reef fish at the sites when the power was off, and further study is warranted. Bioelectromagnetics. 39:35-52, 2018. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Connectivity of microbial populations in coral reef environments: microbiomes of sediment, fish and water

NASA Astrophysics Data System (ADS)

Biddle, J.; Leon, Z. R.; McCargar, M.; Drew, J.

2016-12-01

The benthic environments of coral reefs are heavily shaped by physiochemical factors, but also the ecological interactions of the animals and plants in the reef ecosystem. Microbial populations may be shared between the ecosystem of sediments, seagrasses and reef fish, however it is unknown to what degree. We investigated the potential connections between the microbiomes of sediments, seagrass blades and roots (Syringodium isoetifolium), Surgeonfish (A. nigricauda, Acanthurinae sp. unknown, C. striatus) and Parrotfish (C. spinidens) guts in reef areas of Fiji. We contrasted these with sediment samples from the Florida Keys and ocean water microbiomes from the Atlantic, Pacific and Indian Oceans. In general, we see a higher diversity of sediment microbial communities in Fiji compared to the Florida Keys. However, many of the same taxa are shared in these chemically similar environments, whereas the ocean water environments are completely distinct with few overlapping groups. We were able to show connectivity of a core microbiome between seagrass, fish and sediments in Fiji, including identifying a potential environmental reservoir of a surgeonfish symbiont, Epulopiscum. Finally, we show that fish guts have different microbial populations from crop to hindgut, and that microbial populations differ based on food source. The connection of these ecosystems suggest that the total microbiome of these environments may vary as their animal inhabitants shift in a changing ocean.

Encounter with mesoscale eddies enhances survival to settlement in larval coral reef fishes

PubMed Central

Shulzitski, Kathryn; Sponaugle, Su; Hauff, Martha; Walter, Kristen D.; Cowen, Robert K.

2016-01-01

Oceanographic features, such as eddies and fronts, enhance and concentrate productivity, generating high-quality patches that dispersive marine larvae may encounter in the plankton. Although broad-scale movement of larvae associated with these features can be captured in biophysical models, direct evidence of processes influencing survival within them, and subsequent effects on population replenishment, are unknown. We sequentially sampled cohorts of coral reef fishes in the plankton and nearshore juvenile habitats in the Straits of Florida and used otolith microstructure analysis to compare growth and size-at-age of larvae collected inside and outside of mesoscale eddies to those that survived to settlement. Larval habitat altered patterns of growth and selective mortality: Thalassoma bifasciatum and Cryptotomus roseus that encountered eddies in the plankton grew faster than larvae outside of eddies and likely experienced higher survival to settlement. During warm periods, T. bifasciatum residing outside of eddies in the oligotrophic Florida Current experienced high mortality and only the slowest growers survived early larval life. Such slow growth is advantageous in nutrient poor habitats when warm temperatures increase metabolic demands but is insufficient for survival beyond the larval stage because only fast-growing larvae successfully settled to reefs. Because larvae arriving to the Straits of Florida from distant sources must spend long periods of time outside of eddies, our results indicate that they have a survival disadvantage. High productivity features such as eddies not only enhance the survival of pelagic larvae, but also potentially increase the contribution of locally spawned larvae to reef populations. PMID:27274058

A Decision Support Framework for Science-Based, Multi-Stakeholder Deliberation: A Coral Reef Example

NASA Astrophysics Data System (ADS)

Rehr, Amanda P.; Small, Mitchell J.; Bradley, Patricia; Fisher, William S.; Vega, Ann; Black, Kelly; Stockton, Tom

2012-12-01

We present a decision support framework for science-based assessment and multi-stakeholder deliberation. The framework consists of two parts: a DPSIR (Drivers-Pressures-States-Impacts-Responses) analysis to identify the important causal relationships among anthropogenic environmental stressors, processes, and outcomes; and a Decision Landscape analysis to depict the legal, social, and institutional dimensions of environmental decisions. The Decision Landscape incorporates interactions among government agencies, regulated businesses, non-government organizations, and other stakeholders. It also identifies where scientific information regarding environmental processes is collected and transmitted to improve knowledge about elements of the DPSIR and to improve the scientific basis for decisions. Our application of the decision support framework to coral reef protection and restoration in the Florida Keys focusing on anthropogenic stressors, such as wastewater, proved to be successful and offered several insights. Using information from a management plan, it was possible to capture the current state of the science with a DPSIR analysis as well as important decision options, decision makers and applicable laws with a the Decision Landscape analysis. A structured elicitation of values and beliefs conducted at a coral reef management workshop held in Key West, Florida provided a diversity of opinion and also indicated a prioritization of several environmental stressors affecting coral reef health. The integrated DPSIR/Decision landscape framework for the Florida Keys developed based on the elicited opinion and the DPSIR analysis can be used to inform management decisions, to reveal the role that further scientific information and research might play to populate the framework, and to facilitate better-informed agreement among participants.

KSC-02pd1538

NASA Image and Video Library

2002-10-15

KENNEDY SPACE CENTER, FLA. -- Workers on the deck of the Liberty Star, one of NASA's solid rocket booster retrieval ships, as well as divers in the water, help lower sonar mapping equipment alongside the ship. The equipment will be attached to the ship's hull for an eight-day expedition surveying deep-water coral reefs on the Oculina Banks off eastern Florida. NASA joins the National Oceanic and Atmospheric Administration (NOAA) and other ocean scientists for the sophisticated mapping system that will provide the first high-resolution, three-dimensional map of the Oculina Banks. The survey results are expected to guide another expedition in Spring 2003, using NASA's ship, when the reef fish spawn. Also used will be NASA's underwater robot and an acoustic hydrophone system for listening to fish and vessel noise. Dive sites will be chosen based on the new charts.

KSC-02pd1536

NASA Image and Video Library

2002-10-15

KENNEDY SPACE CENTER, FLA. -- Workers on the deck of the Liberty Star, one of NASA's solid rocket booster retrieval ships, oversee the lifting of sonar mapping equipment from the deck toward the side of the ship. The equipment will be attached to the ship's hull for an eight-day expedition surveying deep-water coral reefs on the Oculina Banks off eastern Florida. NASA joins the National Oceanic and Atmospheric Administration (NOAA) and other ocean scientists for the sophisticated mapping system that will provide the first high-resolution, three-dimensional map of the Oculina Banks. The survey results are expected to guide another expedition in Spring 2003, using NASA's ship, when the reef fish spawn. Also used will be NASA's underwater robot and an acoustic hydrophone system for listening to fish and vessel noise. Dive sites will be chosen based on the new charts.

Airborne Hyperspectral Imaging of Seagrass and Coral Reef

NASA Astrophysics Data System (ADS)

Merrill, J.; Pan, Z.; Mewes, T.; Herwitz, S.

2013-12-01

This talk presents the process of project preparation, airborne data collection, data pre-processing and comparative analysis of a series of airborne hyperspectral projects focused on the mapping of seagrass and coral reef communities in the Florida Keys. As part of a series of large collaborative projects funded by the NASA ROSES program and the Florida Fish and Wildlife Conservation Commission and administered by the NASA UAV Collaborative, a series of airborne hyperspectral datasets were collected over six sites in the Florida Keys in May 2012, October 2012 and May 2013 by Galileo Group, Inc. using a manned Cessna 172 and NASA's SIERRA Unmanned Aerial Vehicle. Precise solar and tidal data were used to calculate airborne collection parameters and develop flight plans designed to optimize data quality. Two independent Visible and Near-Infrared (VNIR) hyperspectral imaging systems covering 400-100nm were used to collect imagery over six Areas of Interest (AOIs). Multiple collections were performed over all sites across strict solar windows in the mornings and afternoons. Independently developed pre-processing algorithms were employed to radiometrically correct, synchronize and georectify individual flight lines which were then combined into color balanced mosaics for each Area of Interest. The use of two different hyperspectral sensor as well as environmental variations between each collection allow for the comparative analysis of data quality as well as the iterative refinement of flight planning and collection parameters.

Hurricanes benefit bleached corals

PubMed Central

Manzello, Derek P.; Brandt, Marilyn; Smith, Tyler B.; Lirman, Diego; Hendee, James C.; Nemeth, Richard S.

2007-01-01

Recent, global mass-mortalities of reef corals due to record warm sea temperatures have led researchers to consider global warming as one of the most significant threats to the persistence of coral reef ecosystems. The passage of a hurricane can alleviate thermal stress on coral reefs, highlighting the potential for hurricane-associated cooling to mitigate climate change impacts. We provide evidence that hurricane-induced cooling was responsible for the documented differences in the extent and recovery time of coral bleaching between the Florida Reef Tract and the U.S. Virgin Islands during the Caribbean-wide 2005 bleaching event. These results are the only known scenario where the effects of a hurricane can benefit a stressed marine community. PMID:17606914

Hurricanes benefit bleached corals.

PubMed

Manzello, Derek P; Brandt, Marilyn; Smith, Tyler B; Lirman, Diego; Hendee, James C; Nemeth, Richard S

2007-07-17

Recent, global mass-mortalities of reef corals due to record warm sea temperatures have led researchers to consider global warming as one of the most significant threats to the persistence of coral reef ecosystems. The passage of a hurricane can alleviate thermal stress on coral reefs, highlighting the potential for hurricane-associated cooling to mitigate climate change impacts. We provide evidence that hurricane-induced cooling was responsible for the documented differences in the extent and recovery time of coral bleaching between the Florida Reef Tract and the U.S. Virgin Islands during the Caribbean-wide 2005 bleaching event. These results are the only known scenario where the effects of a hurricane can benefit a stressed marine community.

Pulley reef: a deep photosynthetic coral reef on the West Florida Shelf, USA

USGS Publications Warehouse

Culter, J.K.; Ritchie, K.B.; Earle, S.A.; Guggenheim, D.E.; Halley, R.B.; Ciembronowicz, K.T.; Hine, A.C.; Jarrett, B.D.; Locker, S.D.; Jaap, W.C.

2006-01-01

Pulley Reef (24°50′N, 83°40′W) lies on a submerged late Pleistocene shoreline feature that formed during a sea-level stillstand from 13.8 to 14.5 ka (Jarrett et al. 2005). The reef is currently 60–75 m deep, exhibits 10–60% coral cover, and extends over approximately 160 km2 of the sea floor. Zooxanthellate corals are primarily Agaricia lamarcki, A. fragilis, Leptoseris cucullata, and less common Madracis formosa, M. pharensis, M. decactis, Montastraea cavernosa, Porites divaricata, Scolymia cubensis and Oculina tenella. Coralline algae are comparable in abundance to stony corals. Other macroalgae include Halimeda tuna, Dictyota divaricata, Lobophora variegata, Ventricatri ventricosa, Verdigelas pelas, and Kallymenia sp. Anadyomene menziesii is abundant. The reef provides a habitat for organisms typically observed at much shallower depths, and is the deepest known photosynthetic coral reef on the North America continental shelf (Fig. 1).

KSC-03pd1380

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - John Reed, co-principal investigator, Harbor Branch Oceanographic Institution, checks out equipment on the Liberty Star, which will be the site of an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. He and other scientists will be deploying an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS). Dr. Grant Gilmore was co-principle investigator of the PAMS, originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1376

NASA Image and Video Library

2003-04-29

KENNEDY SPACE CENTER, FLA. - Dr. Grant Gilmore sits alongside some of the equipment that will be used on an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. Scientists on the team will be deploying an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS). Gilmore is co-principle investigator of the PAMS, originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries and will take place onboard the Liberty Star. The ship departed from Port Canaveral April 29 and will return May 9.

KSC-03pd1378

NASA Image and Video Library

2003-04-29

KENNEDY SPACE CENTER, FLA. - Pictured is a piece of equipment that will be used on an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. Scientists on the team will be deploying an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS). Dr. Grant Gilmore was co-principle investigator of the PAMS, originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries and will take place onboard the Liberty Star. The ship departed from Port Canaveral April 29 and will return May 9.

Coral reefs: threats and conservation in an era of global change.

PubMed

Riegl, Bernhard; Bruckner, Andy; Coles, Steve L; Renaud, Philip; Dodge, Richard E

2009-04-01

Coral reefs are iconic, threatened ecosystems that have been in existence for approximately 500 million years, yet their continued ecological persistence seems doubtful at present. Anthropogenic modification of chemical and physical atmospheric dynamics that cause coral death by bleaching and newly emergent diseases due to increased heat and irradiation, as well as decline in calcification caused by ocean acidification due to increased CO(2), are the most important large-scale threats. On more local scales, overfishing and destructive fisheries, coastal construction, nutrient enrichment, increased runoff and sedimentation, and the introduction of nonindigenous invasive species have caused phase shifts away from corals. Already approximately 20% of the world's reefs are lost and approximately 26% are under imminent threat. Conservation science of coral reefs is well advanced, but its practical application has often been lagging. Societal priorites, economic pressures, and legal/administrative systems of many countries are more prone to destroy rather than conserve coral-reef ecosystems. Nevertheless, many examples of successful conservation exist from the national level to community-enforced local action. When effectively managed, protected areas have contributed to regeneration of coral reefs and stocks of associated marine resources. Local communities often support coral-reef conservation in order to raise income potential associated with tourism and/or improved resource levels. Coral reefs create an annual income in S-Florida alone of over $4 billion. Thus, no conflict between development, societal welfare, and coral-reef conservation needs to exist. Despite growing threats, it is not too late for decisive action to protect and save these economically and ecologically high-value ecosystems. Conservation science plays a critical role in designing effective strategies.

Allowing macroalgae growth forms to emerge: Use of an agent-based model to understand the growth and spread of macroalgae in Florida coral reefs, with emphasis on Halimeda tuna

USGS Publications Warehouse

Yniguez, A.T.; McManus, J.W.; DeAngelis, D.L.

2008-01-01

The growth patterns of macroalgae in three-dimensional space can provide important information regarding the environments in which they live, and insights into changes that may occur when those environments change due to anthropogenic and/or natural causes. To decipher these patterns and their attendant mechanisms and influencing factors, a spatially explicit model has been developed. The model SPREAD (SPatially-explicit Reef Algae Dynamics), which incorporates the key morphogenetic characteristics of clonality and morphological plasticity, is used to investigate the influences of light, temperature, nutrients and disturbance on the growth and spatial occupancy of dominant macroalgae in the Florida Reef Tract. The model species, Halimeda and Dictyota spp., are modular organisms, with an 'individual' being made up of repeating structures. These species can also propagate asexually through clonal fragmentation. These traits lead to potentially indefinite growth and plastic morphology that can respond to environmental conditions in various ways. The growth of an individual is modeled as the iteration of discrete macroalgal modules whose dynamics are affected by the light, temperature, and nutrient regimes. Fragmentation is included as a source of asexual reproduction and/or mortality. Model outputs are the same metrics that are obtained in the field, thus allowing for easy comparison. The performance of SPREAD was tested through sensitivity analysis and comparison with independent field data from four study sites in the Florida Reef Tract. Halimeda tuna was selected for initial model comparisons because the relatively untangled growth form permits detailed characterization in the field. Differences in the growth patterns of H. tuna were observed among these reefs. SPREAD was able to closely reproduce these variations, and indicate the potential importance of light and nutrient variations in producing these patterns. ?? 2008 Elsevier B.V.

Dynamics of carbonate chemistry, production, and calcification of the Florida Reef Tract (2009-2010): Evidence for seasonal dissolution

NASA Astrophysics Data System (ADS)

Muehllehner, Nancy; Langdon, Chris; Venti, Alyson; Kadko, David

2016-05-01

Ocean acidification is projected to lower the Ωar of reefal waters by 0.3-0.4 units by the end of century, making it more difficult for calcifying organisms to secrete calcium carbonate while at the same time making the environment more favorable for abiotic and biotic dissolution of the reefal framework. There is great interest in being able to project the point in time when coral reefs will cross the tipping point between being net depositional to net erosional in terms of their carbonate budgets. Periodic in situ assessments of the balance between carbonate production and dissolution that spans seasonal time scales may prove useful in monitoring and formulating projections of the impact of ocean acidification on reefal carbonate production. This study represents the first broad-scale geochemical survey of the rates of net community production (NCP) and net community calcification (NCC) across the Florida Reef Tract (FRT). Surveys were performed at approximately quarterly intervals in 2009-2010 across seven onshore-offshore transects spanning the upper, middle, and lower Florida Keys. Averaged across the FRT, the rates of NCP and NCC were positive during the spring/summer at 62 ± 7 and 17 ± 2 mmol m-2 d-1, respectively, and negative during the fall/winter at -33 ± 6 and -7 ± 2 mmol m-2 d-1. The most significant finding of the study was that the northernmost reef is already net erosional (-1.1 ± 0.4 kg CaCO3 m-2 yr-1) and midreefs to the south were net depositional on an annual basis (0.4 ± 0.1 kg CaCO3 m-2 yr-1) but erosional during the fall and winter. Only the two southernmost reefs were net depositional year-round. These results indicate that parts of the FRT have already crossed the tipping point for carbonate production and other parts are getting close.

Use of Surveillance Systems in Detection of a Ciguatera Fish Poisoning Outbreak - Orange County, Florida, 2014.

PubMed

Klekamp, Benjamin G; Bodager, Dean; Matthews, Sarah D

2015-10-16

What is already known on this topic? Ciguatera fish poisoning (CFP), caused by the ingestion of predatory reef-dwelling fish harboring ciguatoxins is one of the most commonly reported fish-associated marine intoxications. Ciguatoxin retains toxicity regardless of freezing or cooking. Prompt treatment can reduce debilitating neurologic symptoms that are associated with CFP.What is added by this report? Syndromic surveillance systems in Florida identified six adults with CFP following consumption of black grouper. Five patients sought medical attention; health care providers did not make a diagnosis of CFP or report the cases to public health authorities, and none of the patients received treatment. Close collaboration among several investigating agencies allowed traceback efforts to link black grouper consumed by all patients to a common international distributor.What are the implications for public health practice? Syndromic surveillance systems capable of detecting CFP are essential public health tools to identify outbreaks and enhance investigations. Medical and public health practitioners should be educated to inquire about recent fish consumption when evaluating patients with clinically compatible signs and symptoms to allow for prompt treatment, and report suspected CFP cases to public health authorities to facilitate source-food traceback efforts. Public education on avoidance of consumption of relatively large predatory reef fish species known to be from ciguatoxic-endemic areas might reduce the risk for CFP.

Key Largo Limestone revisited: Pleistocene shelf-edge facies, Florida Keys, USA

USGS Publications Warehouse

Gray, Multer H.; Gischler, E.; Lundberg, J.; Simmons, K.R.; Shinn, E.A.

2002-01-01

New dates and analysis of 12 deep and 57 shallow cores allow a more detailed interpretation of the Pleistocene shelf edge of the Florida Platform as found in various facies of the Key Largo Limestone beneath the Florida Keys. In this study a three-phase evolution of the Quaternary units (Q1-Q5) of the Key Largo is presented with new subdivision of the Q5. (1) In the first phase, the Q1 and Q2 (perhaps deposited during oxygen-isotope stage 11) deep-water quartz-rich environment evolved into a shallow carbonate phase. (2) Subsequently, a Q3 (presumably corresponding to oxygen-isotope stage 9) flourishing reef and productive high-platform sediment phase developed. (3) Finally, a Q4 and Q5 (corresponding to oxygen-isotope stages 7 and 5) stabilization phase occured with reefs and leeward productive lagoons, followed by lower sea levels presenting a sequence of younger (isotope substages 5c, 5a) shelf-margin wedges, sediment veneers and outlier reefs. The Key Largo Limestone provides an accessible model of a carbonate shelf edge with fluctuating water depth, bordering a deep seaward basin for a period of at least 300 ka. During this time, at least four onlaps/offlaps, often separated by periods of karst development with associated diagenetic alterations, took place. The story presented by this limestone not only allows a better understanding of the history of south Florida but also aids in the interpretation of similar persistent shelf-edge sites bordering deep basins in other areas.

Calcification rates of the massive coral Siderastrea siderea and crustose coralline algae along the Florida Keys (USA) outer-reef tract

USGS Publications Warehouse

Kuffner, I.B.; Hickey, T.D.; Morrison, J.M.

2013-01-01

Coral reefs are degrading on a global scale, and rates of reef-organism calcification are predicted to decline due to ocean warming and acidification. Systematic measurements of calcification over space and time are necessary to detect change resulting from environmental stressors. We established a network of calcification monitoring stations at four managed reefs along the outer Florida Keys Reef Tract (FKRT) from Miami to the Dry Tortugas. Eighty colonies (in two sequential sets of 40) of the reef-building coral, Siderastrea siderea, were transplanted to fixed apparatus that allowed repetitive detachment for buoyant weighing every 6 months. Algal-recruitment tiles were also deployed during each weighing interval to measure net calcification of the crustose coralline algal (CCA) community. Coral-calcification rates were an order of magnitude greater than those of CCA. Rates of coral calcification were seasonal (summer calcification was 53% greater than winter), and corals in the Dry Tortugas calcified 48% faster than those at the other three sites. Linear extension rates were also highest in the Dry Tortugas, whereas percent area of the coral skeletons excavated by bioeroding fauna was lowest. The spatial patterns in net coral calcification revealed here correlate well with Holocene reef thickness along the FKRT and, in part, support the “inimical waters hypothesis” proposed by Ginsburg, Hudson, and Shinn almost 50 yrs ago to explain reef development in this region. Due to the homogeneity in coral-calcification rates among the three main Keys sites, we recommend refinement of this hypothesis and suggest that water-quality variables (e.g., carbonate mineral saturation state, dissolved and particulate organic matter, light attenuation) be monitored alongside calcification in future studies. Our results demonstrate that our calcification monitoring network presents a feasible and worthwhile approach to quantifying potential impacts of ocean acidification, warming, and/or deteriorating water quality on the process of calcification.

Calcification rates of the massive coral Siderastrea siderea and crustose coralline algae along the Florida Keys (USA) outer-reef tract

NASA Astrophysics Data System (ADS)

Kuffner, I. B.; Hickey, T. D.; Morrison, J. M.

2013-12-01

Coral reefs are degrading on a global scale, and rates of reef-organism calcification are predicted to decline due to ocean warming and acidification. Systematic measurements of calcification over space and time are necessary to detect change resulting from environmental stressors. We established a network of calcification monitoring stations at four managed reefs along the outer Florida Keys Reef Tract (FKRT) from Miami to the Dry Tortugas. Eighty colonies (in two sequential sets of 40) of the reef-building coral, Siderastrea siderea, were transplanted to fixed apparatus that allowed repetitive detachment for buoyant weighing every 6 months. Algal-recruitment tiles were also deployed during each weighing interval to measure net calcification of the crustose coralline algal (CCA) community. Coral-calcification rates were an order of magnitude greater than those of CCA. Rates of coral calcification were seasonal (summer calcification was 53 % greater than winter), and corals in the Dry Tortugas calcified 48 % faster than those at the other three sites. Linear extension rates were also highest in the Dry Tortugas, whereas percent area of the coral skeletons excavated by bioeroding fauna was lowest. The spatial patterns in net coral calcification revealed here correlate well with Holocene reef thickness along the FKRT and, in part, support the "inimical waters hypothesis" proposed by Ginsburg, Hudson, and Shinn almost 50 yrs ago to explain reef development in this region. Due to the homogeneity in coral-calcification rates among the three main Keys sites, we recommend refinement of this hypothesis and suggest that water-quality variables (e.g., carbonate mineral saturation state, dissolved and particulate organic matter, light attenuation) be monitored alongside calcification in future studies. Our results demonstrate that our calcification monitoring network presents a feasible and worthwhile approach to quantifying potential impacts of ocean acidification, warming, and/or deteriorating water quality on the process of calcification.

Bathymetry and acoustic backscatter of the mid and outer continental shelf, head of De Soto Canyon, northeastern Gulf of Mexico

USGS Publications Warehouse

Gardner, James V.; Hughes-Clarke, John E.; Meyer, Larry A.

2002-01-01

The mid to outer continental shelf off Mississippi-Alabama and off northwest Florida were the focus of US Geological Survey (USGS) multibeam echosounder (MBES) mapping cruises in 2000 and 2001, respectively. These areas were mapped to investigate the extent of "deep-water reefs" first suggested by Ludwick and Walton (1957). The reefs off Mississippi and Alabama were initially described in water depths of 60 to 120 m (Ludwick and Walton, 1957) but the 2000 mapping found reef and hardgrounds to be much more extensive than previously thought (Gardner et al., 2001). The persistent trend of reef-like features along the outer shelf of Mississippi-Alabama suggested the trend might continue along the northwest Florida mid and outer shelf so a MBES-mapping effort was mounted in 2001 to test this suggestion. It is critical to determine the accurate location, geomorphology, and types of the ridges and reefs that occur in this region to understand the Quaternary history of the area and to assess their importance as benthic habitats for fisheries. The 2001 survey found a series of shelf-depth platforms with ridges (possibly reefs) constructed on their surfaces (Gardner et al., 2002). The area known as the "head of De Soto Canyon" is the large unmapped region between the 2000 and 2001 mapped areas. The head of De Soto Canyon is an outer shelf zone with a relatively steep western wall and a much gentler eastern wall. It was unknown prior to this cruise whether the reefs of the Mississippi-Alabama shelf continue eastward into the head of De Soto Canyon and connect with the ridges and reefs mapped on the northwest Florida outer shelf. The existence of carbonate-cemented latest Quaternary to Holocene sandstones along the western wall of the head of De Soto Canyon (Shipp and Hopkins, 1978; Benson et al., 1997; W.W. Schroeder, personnel comm., 2002) is of interest because of the potential benthic habitats they may represent. Precisely georeferenced high-resolution mapping of bathymetry is a fundamental first step in the study of an area suspected to be critical benthic habitats. Morphology is thought to be critical to define the distribution of dominant demersal plankton/planktivores communities. Community structure and trophodynamics of demersal fishes of the outer continental shelf of the northeastern Gulf of Mexico presently are focuses of a major USGS research project. A goal of the project is to answer questions concerning the relative roles played by morphology and surficial geology in controlling biological differentiation. Deep-water ridges, reefs, and outcrops are important because they are fish havens and key spawning sites, and are critical habitats for larval, juvenile, and economically important sport/food fishes.

Geographic differences in vertical connectivity in the Caribbean coral Montastraea cavernosa despite high levels of horizontal connectivity at shallow depths.

PubMed

Serrano, X; Baums, I B; O'Reilly, K; Smith, T B; Jones, R J; Shearer, T L; Nunes, F L D; Baker, A C

2014-09-01

The deep reef refugia hypothesis proposes that deep reefs can act as local recruitment sources for shallow reefs following disturbance. To test this hypothesis, nine polymorphic DNA microsatellite loci were developed and used to assess vertical connectivity in 583 coral colonies of the Caribbean depth-generalist coral Montastraea cavernosa. Samples were collected from three depth zones (≤10, 15-20 and ≥25 m) at sites in Florida (within the Upper Keys, Lower Keys and Dry Tortugas), Bermuda, and the U.S. Virgin Islands. Migration rates were estimated to determine the probability of coral larval migration from shallow to deep and from deep to shallow. Finally, algal symbiont (Symbiodinium spp.) diversity and distribution were assessed in a subset of corals to test whether symbiont depth zonation might indicate limited vertical connectivity. Overall, analyses revealed significant genetic differentiation by depth in Florida, but not in Bermuda or the U.S. Virgin Islands, despite high levels of horizontal connectivity between these geographic locations at shallow depths. Within Florida, greater vertical connectivity was observed in the Dry Tortugas compared to the Lower or Upper Keys. However, at all sites, and regardless of the extent of vertical connectivity, migration occurred asymmetrically, with greater likelihood of migration from shallow to intermediate/deep habitats. Finally, most colonies hosted a single Symbiodinium type (C3), ruling out symbiont depth zonation of the dominant symbiont type as a structuring factor. Together, these findings suggest that the potential for shallow reefs to recover from deep-water refugia in M. cavernosa is location-specific, varying among and within geographic locations likely as a consequence of local hydrology. © 2014 John Wiley & Sons Ltd.

Outbreak bias in illness reporting and case confirmation in ciguatera fish poisoning surveillance in south Florida.

PubMed

Begier, Elizabeth M; Backer, Lorraine C; Weisman, Richard S; Hammond, Roberta M; Fleming, Lora E; Blythe, Donna

2006-01-01

Ciguatera fish poisoning is a potentially life-threatening disease caused by eating coral reef fish contaminated with ciguatoxins and is the most common marine poisoning. However, existing surveillance systems capture few cases. To improve regional ciguatera surveillance in South Florida, this study compared ciguatera illnesses in the Florida Poison Information Center-Miami (FPICM) call database to ciguatera cases in the Florida Department of Health (FDOH) disease surveillance systems. Univariate and multivariate logistic regression were used to identify predictors of when FPICM reported ciguatera illnesses to FDOH and whether FDOH confirmed reported ciguatera cases. FPICM staff preferentially reported ciguatera illnesses that were of shorter duration (adjusted odds ratio [AOR] = 0.84 per additional illness day; 95% confidence interval [CI] 0.74, 0.97); outbreak-associated (AOR = 7.0; 95% CI 2.5, 19.5); and clinically more severe (AOR = 21.6; 95% CI 2.3, 198.5). Among ciguatera illnesses reported to FDOH, outbreak-associated illnesses were more likely than single, sporadic illnesses to become confirmed surveillance cases (crude OR = 11.1; 95% CI 2.0, 62.5). The over-representation of outbreak-associated ciguatera cases underestimates the true contribution of sporadic illnesses to ciguatera disease burden. This bias should be considered when evaluating surveillance systems that include both outbreak-associated and sporadic illness reports.

Geology and biology of the "Sticky Grounds", shelf-margin carbonate mounds, and mesophotic ecosystem in the eastern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Locker, Stanley D.; Reed, John K.; Farrington, Stephanie; Harter, Stacey; Hine, Albert C.; Dunn, Shane

2016-08-01

Shelf-margin carbonate mounds in water depths of 116-135 m in the eastern Gulf of Mexico along the central west Florida shelf were investigated using swath bathymetry, side-scan sonar, sub-bottom imaging, rock dredging, and submersible dives. These enigmatic structures, known to fisherman as the "Sticky Grounds", trend along slope, are 5-15 m in relief with base diameters of 5-30 m, and suggest widespread potential for mesophotic reef habitat along the west Florida outer continental shelf. Possible origins are sea-level lowstand coral patch reefs, oyster reefs, or perhaps more recent post-lowstand biohermal development. Rock dredging recovered bioeroded carbonate-rock facies comprised of bored and cemented bioclastics. Rock sample components included calcified worm tubes, pelagic sediment, and oysters normally restricted to brackish nearshore areas. Several reef sites were surveyed at the Sticky Grounds during a cruise in August 2010 with the R/V Seward Johnson using the Johnson-Sea-Link II submersible to ground truth the swath-sonar maps and to quantify and characterize the benthic habitats, benthic macrofauna, fish populations, and coral/sponge cover. This study characterizes for the first time this mesophotic reef ecosystem and associated fish populations, and analyzes the interrelationships of the fish assemblages, benthic habitats and invertebrate biota. These highly eroded rock mounds provide extensive hard-bottom habitat for reef invertebrate species as well as essential fish habitat for reef fish and commercially/recreationally important fish species. The extent and significance of associated living resources with these bottom types is particularly important in light of the 2010 Deepwater Horizon oil spill in the northeastern Gulf and the proximity of the Loop Current. Mapping the distribution of these mesophotic-depth ecosystems is important for quantifying essential fish habitat and describing benthic resources. These activities can improve ecosystem management and planning of future oil and gas activities in this outer continental shelf region.

Geology and biology of the "Sticky Grounds," shelf-margin carbonate mounds, and mesophotic ecosystem in the eastern Gulf of Mexico

USGS Publications Warehouse

Locker, Stanley D.; Reed, John K.; Farrington, Stephanie; Harter, Stacey; Hine, Albert C.; Dunn, Shane

2016-01-01

Shelf-margin carbonate mounds in water depths of 116–135 m in the eastern Gulf of Mexico along the central west Florida shelf were investigated using swath bathymetry, side-scan sonar, sub-bottom imaging, rock dredging, and submersible dives. These enigmatic structures, known to fisherman as the “Sticky Grounds”, trend along slope, are 5–15 m in relief with base diameters of 5–30 m, and suggest widespread potential for mesophotic reef habitat along the west Florida outer continental shelf. Possible origins are sea-level lowstand coral patch reefs, oyster reefs, or perhaps more recent post-lowstand biohermal development. Rock dredging recovered bioeroded carbonate-rock facies comprised of bored and cemented bioclastics. Rock sample components included calcified worm tubes, pelagic sediment, and oysters normally restricted to brackish nearshore areas. Several reef sites were surveyed at the Sticky Grounds during a cruise in August 2010 with the R/V Seward Johnson using the Johnson-Sea-Link II submersible to ground truth the swath-sonar maps and to quantify and characterize the benthic habitats, benthic macrofauna, fish populations, and coral/sponge cover. This study characterizes for the first time this mesophotic reef ecosystem and associated fish populations, and analyzes the interrelationships of the fish assemblages, benthic habitats and invertebrate biota. These highly eroded rock mounds provide extensive hard-bottom habitat for reef invertebrate species as well as essential fish habitat for reef fish and commercially/recreationally important fish species. The extent and significance of associated living resources with these bottom types is particularly important in light of the 2010 Deepwater Horizon oil spill in the northeastern Gulf and the proximity of the Loop Current. Mapping the distribution of these mesophotic-depth ecosystems is important for quantifying essential fish habitat and describing benthic resources. These activities can improve ecosystem management and planning of future oil and gas activities in this outer continental shelf region.

Morpho-structural and ecological features of a shallow vermetid bioconstruction in the Tyrrhenian Sea (Mediterranean Sea, Italy)

NASA Astrophysics Data System (ADS)

Donnarumma, Luigia; Sandulli, Roberto; Appolloni, Luca; Di Stefano, Floriana; Russo, Giovanni Fulvio

2018-01-01

Biogenic formations, built up by the sessile and gregarious vermetid gastropod Dendropoma cristatum, were studied from June to October 2014 along the rocky shores of Licosa islet (Gulf of Salerno, Tyrrhenian Sea), where they build up the northernmost reefs in the Mediterranean Sea in order to shed light on possible latitudinal changes. The islet has two differently exposed sides, with three types of vermetid formations: the first consists in a thin layer composed by vermetid gastropods and the coralline alga N. brassica-florida, widespread only in the sheltered side of the islet; the second is represented by small isolated pillows (13.9 ± 5.64 cm), all around the islet at depth of more than fifteen centimetres; the third is a well-structured reef, characterized by a dense layer of mollusc shells that overgrow each other, only found in the exposed side of the islet. The vermetid reef was monitored in two sites with different substrates: ancient walls, made of calcareous lateritious material, and the flysch rocks, composed by siliceous turbiditic deposits. While no differences arise in gastropod density related to rock type (calcareous lateritious material versus siliceous turbiditic deposits), significant differences have been found along a vertical gradient, seeing density increases from the upper intertidal to the upper subtidal level. The associated algal cover seems to be inversely related to the vermetid density. In the upper intertidal, D. cristatum was almost completely covered (about 83%) by a thick layer of encrusting alga N. brassica-florida. In the lower intertidal the encrusting alga disappear but the shells of vermetid gastropods were remarkably colonized by the erected red algae of the "Laurencia complex" (70%) while in the upper subtidal, the vermetid shells were scarcely covered, mainly by other algal species (13%). By comparing present data with those of Sicilian reefs no evidences arise due to the different latitude. Innovative approaches (Remotely Piloted Aircraft Systems technology and fractal geometry) applied to these marine bioconstructions, resulted very effective in mapping and structuring the complexity of the reefs.

Spatial and temporal dynamics of commercial reef-fish fisheries on the West Florida Shelf: Understanding drivers of fleet behavior and the implications for future management

NASA Astrophysics Data System (ADS)

Cockrell, M.; Murawski, S. A.; Sanchirico, J. N.; O'Farrell, S.; Strelcheck, A.

2016-02-01

Spatial and temporal patterns of fishing activity have historically been described over relatively coarse scales or with limited datasets. However, new and innovative approaches for fisheries management will require an understanding of both species population dynamics and fleet behavior at finer spatial and temporal resolution. In this study we describe the spatial and temporal patterns of commercial reef-fish fisheries on the West Florida Shelf (WFS) from 2006-14, using a combination of on-board observer, catch logbook, and vessel satellite tracking data. The satellite tracking data is both high resolution (ie, records from each vessel at least once every hour for the duration of a trip), and required of all federally-permitted reef fish vessels in the Gulf of Mexico, making this a uniquely rich and powerful dataset. Along with spatial and temporal fishery dynamics, we quantified concomitant patterns in fishery economics and catch metrics, such as total landings and catch composition. Fishery patterns were correlated to a number of variables across the vessel, trip, and whole fleet scales, including vessel size, distance from home port, number of days at sea, and days available to fish. Notably, changes in management structure during the years examined (eg, establishment of a seasonal closed area in 2009 and implementation of an individual fishing quota system for Grouper-Tilefish in 2010), as well as emergency spatial closures during the Deepwater Horizon oil spill in 2010, enabled us to examine the impacts of specific management frameworks on the WFS reef-fish fishery. This research highlights the need to better understand the biological, economic, and social impacts within fisheries when managing for conservation and fisheries sustainability. We discuss our results in the context of a changing policy and management landscape for marine and coastal resources in the Gulf of Mexico.

Ecological characterization of the lower Everglades, Florida Bay, and the Florida Keys

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schomer, N.S.; Drew, R.D.

A conceptual model of the study area identifies four major ecological zones: (1) terrestrial and freshwater wetlands, (2) estuarine and saltwater wetlands, (3) Florida Bay and mangrove islands, and (4) the Florida Keys. These zones are delineated by differences in basic physical-chemical background factors which in turn promote characteristic ecological communities. The terrestrial and freshwater wetlands support pinelands, sawgrass marshes, wet prairies, sloughs and occasional tree islands. The estuarine and saltwater wetlands support mangrove forests, salt marshes and oscillating salinity systems. Florida Bay exhibits oscillating meso- to hypersaline waters over grassbeds on marine lime mud sediments surrounding deeper lake areas.more » The exposed tips of the mud banks frequently support mangrove or salt prairie vegetation. The Florida Keys support almost all of the above communities to some small degree but are characterized by extensive offshore coral reefs. The productivity of these communities with regard to fish and wildlife reflects (1) the diversity and type of habitats available to species that are potentially capable of exploiting them, (2) the degree of alteration of these habitats by man and natural forces, and (3) historical, biogeographic and random factors that restrict organisms to specific environments or prohibit them from exploiting a potential habitat.« less

Tropical cyclones cause CaCO3 undersaturation of coral reef seawater in a high-CO2 world

NASA Astrophysics Data System (ADS)

Manzello, Derek; Enochs, Ian; Musielewicz, Sylvia; Carlton, Renée.; Gledhill, Dwight

2013-10-01

Ocean acidification is the global decline in seawater pH and calcium carbonate (CaCO3) saturation state (Ω) due to the uptake of anthropogenic CO2 by the world's oceans. Acidification impairs CaCO3 shell and skeleton construction by marine organisms. Coral reefs are particularly vulnerable, as they are constructed by the CaCO3 skeletons of corals and other calcifiers. We understand relatively little about how coral reefs will respond to ocean acidification in combination with other disturbances, such as tropical cyclones. Seawater carbonate chemistry data collected from two reefs in the Florida Keys before, during, and after Tropical Storm Isaac provide the most thorough data to-date on how tropical cyclones affect the seawater CO2 system of coral reefs. Tropical Storm Isaac caused both an immediate and prolonged decline in seawater pH. Aragonite saturation state was depressed by 1.0 for a full week after the storm impact. Based on current "business-as-usual" CO2 emissions scenarios, we show that tropical cyclones with high rainfall and runoff can cause periods of undersaturation (Ω < 1.0) for high-Mg calcite and aragonite mineral phases at acidification levels before the end of this century. Week-long periods of undersaturation occur for 18 mol % high-Mg calcite after storms by the end of the century. In a high-CO2 world, CaCO3 undersaturation of coral reef seawater will occur as a result of even modest tropical cyclones. The expected increase in the strength, frequency, and rainfall of the most severe tropical cyclones with climate change in combination with ocean acidification will negatively impact the structural persistence of coral reefs.

Tropical Cyclones Cause CaCO3 Undersaturation of Coral Reef Seawater in a High-CO2 World

NASA Astrophysics Data System (ADS)

Manzello, D.; Enochs, I.; Carlton, R.; Musielewicz, S.; Gledhill, D. K.

2013-12-01

Ocean acidification is the global decline in seawater pH and calcium carbonate (CaCO3) saturation state (Ω) due to the uptake of anthropogenic CO2 by the world's oceans. Acidification impairs CaCO3 shell and skeleton construction by marine organisms. Coral reefs are particularly vulnerable, as they are constructed by the CaCO3 skeletons of corals and other calcifiers. We understand relatively little about how coral reefs will respond to ocean acidification in combination with other disturbances, such as tropical cyclones. Seawater carbonate chemistry data collected from two reefs in the Florida Keys before, during, and after Tropical Storm Isaac provide the most thorough data to-date on how tropical cyclones affect the seawater CO2-system of coral reefs. Tropical Storm Isaac caused both an immediate and prolonged decline in seawater pH. Aragonite saturation state was depressed by 1.0 for a full week after the storm impact. Based on current 'business-as-usual' CO2 emissions scenarios, we show that tropical cyclones with high rainfall and runoff can cause periods of undersaturation (Ω < 1.0) for high-Mg calcite and aragonite mineral phases at acidification levels before the end of this century. Week-long periods of undersaturation occur for 18 mol% high-Mg calcite after storms by the end of the century. In a high-CO2 world, CaCO3 undersaturation of coral reef seawater can occur as a result of even modest tropical cyclones. The expected increase in the strength, frequency, and rainfall of the most severe tropical cyclones with climate change in combination with ocean acidification will negatively impact the structural persistence of coral reefs over this century.

Gauging state-level and user group views of oyster reef restoration activities in the northern Gulf of Mexico

USGS Publications Warehouse

LaPeyre, Megan K.; Nix, Ashby; Laborde, Luke; Piazza, Bryan P.

2012-01-01

Successful oyster reef restoration, like many conservation challenges, requires not only biological understanding of the resource, but also stakeholder cooperation and political support. To measure perceptions of oyster reef restoration activities and priorities for future restoration along the northern Gulf of Mexico coast, a survey of 1500 individuals representing 4 user groups (oyster harvesters, shrimpers, environmental organization members, professionals), across 5 states (Texas, Louisiana, Mississippi, Alabama, Florida) was conducted in 2011. All respondents highly supported reef restoration efforts, but there was a dichotomy in preferred restoration goals with commercial fishermen more likely to support oyster reef restoration for stock enhancement, while professionals and environmental organization members were more likely to support oyster reef restoration to enhance ecosystem services. All user groups identified enforcement, funding, and appropriate site selection as basic requirements for successful reef restoration. For management of restored oyster reefs, oyster harvesters and shrimpers were less likely to support options that restricted the use of reefs, including gear restrictions and permanent closures, but did support rotating annual reef closures, while other stakeholders were willing to consider all options, including annual reef closures and sanctuary reefs. Overall, there were clear differences in management and communication preferences across user groups, but few differences across states. Understanding these key differences in stakeholder support for, and willingness to accept specific management actions is critical in moving management and restoration forward while minimizing conflict.

KSC-03pd1375

NASA Image and Video Library

2003-04-29

KENNEDY SPACE CENTER, FLA. - Onboard the Liberty Star, the NASA Space Shuttle support ship operated by United Space Alliance, .Dr. Grant Gilmore holds some of the equipment to be used on an undersea expedition. Gilmore is co-principle investigator of the Passive Acoustic Monitoring System (PAMS), part of the equipment. NASA/KSC is participating in the expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. Scientists on the team will be deploying an underwater robot, a seafloor sampler, and the PAMS, originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

Regional estimates of reef carbonate dynamics and productivity Using Landsat 7 ETM+, and potential impacts from ocean acidification

USGS Publications Warehouse

Moses, C.S.; Andrefouet, S.; Kranenburg, C.; Muller-Karger, F. E.

2009-01-01

Using imagery at 30 m spatial resolution from the most recent Landsat satellite, the Landsat 7 Enhanced Thematic Mapper Plus (ETM+), we scale up reef metabolic productivity and calcification from local habitat-scale (10 -1 to 100 km2) measurements to regional scales (103 to 104 km2). Distribution and spatial extent of the North Florida Reef Tract (NFRT) habitats come from supervised classification of the Landsat imagery within independent Landsat-derived Millennium Coral Reef Map geomorphologic classes. This system minimizes the depth range and variability of benthic habitat characteristics found in the area of supervised classification and limits misclassification. Classification of Landsat imagery into 5 biotopes (sand, dense live cover, sparse live cover, seagrass, and sparse seagrass) by geomorphologic class is >73% accurate at regional scales. Based on recently published habitat-scale in situ metabolic measurements, gross production (P = 3.01 ?? 109 kg C yr -1), excess production (E = -5.70 ?? 108 kg C yr -1), and calcification (G = -1.68 ?? 106 kg CaCO 3 yr-1) are estimated over 2711 km2 of the NFRT. Simple models suggest sensitivity of these values to ocean acidification, which will increase local dissolution of carbonate sediments. Similar approaches could be applied over large areas with poorly constrained bathymetry or water column properties and minimal metabolic sampling. This tool has potential applications for modeling and monitoring large-scale environmental impacts on reef productivity, such as the influence of ocean acidification on coral reef environments. ?? Inter-Research 2009.

Rapid invasion of the Indo-Pacific lionfishes (Pterois volitans and Pterois miles) in the Florida Keys, USA: evidence from multiple pre-and post-invasion data sets

USGS Publications Warehouse

Ruttenberg, Benjamin I.; Schofield, Pamela J.; Akins, J. Lad; Acosta, Alejandro; Feeley, Michael W.; Blondeau, Jeremiah; Smith, Steven G.; Ault, Jerald S.

2012-01-01

Over the past decade, Indo-Pacific lionfishes, Pterois volitans (Linnaeus, 1758) and Pterois miles (Bennett, 1828), venomous members of the scorpionfish family (Scorpaenidae), have invaded and spread throughout much of the tropical and subtropical northwestern Atlantic Ocean and Caribbean Sea. These species are generalist predators of fishes and invertebrates with the potential to disrupt the ecology of the invaded range. Lionfishes have been present in low numbers along the east coast of Florida since the 1980s, but were not reported in the Florida Keys until 2009. We document the appearance and rapid spread of lionfishes in the Florida Keys using multiple long-term data sets that include both pre- and post-invasion sampling. Our results are the first to quantify the invasion of lionfishes in a new area using multiple independent, ongoing monitoring data sets, two of which have explicit estimates of sampling effort. Between 2009 and 2011, lionfish frequency of occurrence, abundance, and biomass increased rapidly, increasing three- to six-fold between 2010 and 2011 alone. In addition, individuals were detected on a variety of reef and non-reef habitats throughout the Florida Keys. Because lionfish occurrence, abundance, and impacts are expected to continue to increase throughout the region, monitoring programs like those used in this study will be essential to document ecosystem changes that may result from this invasion.

Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (south Florida): Long-spined Black Sea urchin. [Diadema antillarum

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ogden, J.C.; Carpenter, R.C.

1987-08-01

The long-spined black sea urchin, Diadema antillarum, is one of the most common marine invertebrates in the South Florida and Caribbean regions. Diadema is gregarious and is found in large groups on hard bottom in shallow waters. Spawning is year-round, concentrated in late winter to early summer, and the larvae spend an unknown period in the plankton. Following settlement, growth is rapid, to a maximum size of about 10 cm in 3 to 4 years. Diadema is a grazer, feeding on small algal filaments and on seagrass, and tends to be active at night. Grazing activities can produce grazed halosmore » around patch reefs in the vicinity of seagrass beds. Many experiments have indicated the importance of this grazing in the coexistence of species on the reef and in maintaining high biological productivity. In 1983-84, Diadema suffered an unprecedented mass mortality and its populations were reduced by up to 98% throughout its range. The elimination of Diadema has affected algal biomass, reef productivity, and fish populations. Diadema populations are slowly beginning to increase, but complete recovery may take years.« less

Water Quality Standards for Coral Reef Protection | Science ...

EPA Pesticide Factsheets

The U.S. Clean Water Act provides a legal framework to protect coastal biological resources such as coral reefs, mangrove forests, and seagrass meadows from the damaging effects of human activities. Even though many resources are protected under this authority, water quality standards have not been effectively applied to coral reefs. The Environmental Protection Agency is promoting biocriteria and other water quality standards through collaborative development of bioassessment procedures, indicators and monitoring strategies. To support regulatory action, bioassessment indicators must be biologically meaningful, relevant to management, responsive to human disturbance, and relatively immune to natural variability. A rapid bioassessment protocol for reef-building stony corals was developed and tested for regulatory applicability. Preliminary testing in the Florida Keys found indicators had sufficient precision and provided information relevant to coral reef management. Sensitivity to human disturbance was demonstrated in the U.S. Virgin Islands for five of eight indicators tested. Once established, monitoring programs using these indicators can provide valuable, long-term records of coral condition and regulatory compliance. Development of a rapid bioassement protocol for reef-building stony corals was tested for regulatory applicability.

Quantification of Boat Visitation Rates at Artificial and Natural Reefs in the Eastern Gulf of Mexico Using Acoustic Recorders

PubMed Central

Simard, Peter; Wall, Kara R.; Mann, David A.; Wall, Carrie C.; Stallings, Christopher D.

2016-01-01

Artificial reefs are commonly used as a management tool, in part to provide ecosystem services, including opportunities for recreational fishing and diving. Quantifying the use of artificial reefs by recreational boaters is essential for determining their value as ecosystem services. In this study, four artificial–natural reef pairs in the eastern Gulf of Mexico (off western Florida) were investigated for boat visitation rates using autonomous acoustic recorders. Digital SpectroGram (DSG) recorders were used to collect sound files from April 2013 to March 2015. An automatic detection algorithm was used to identify boat noise in individual files using the harmonic peaks generated by boat engines, and by comparing the sound amplitude of each file with surrounding files. In all four pairs, visitation rates were significantly higher at the artificial reef than the natural reef. This increase in boat visitation was likely due to actual or perceived increased quality of fishing and diving at the artificial reefs, or to lack of knowledge of the presence or locations of the natural reefs. Inshore reefs (<15 m depth) had high variability in monthly visitation rates, which were generally highest in warmer months. However the seasonal signal was dampened on offshore reefs (>25 m depth). This study appears to be the first to use acoustic data to measure participant use of boating destinations, and highlights the utility of acoustic monitoring for the valuation of this important ecosystem service provided by artificial reefs. PMID:27500533

LIDAR optical rugosity of coral reefs in Biscayne National Park, Florida

USGS Publications Warehouse

Brock, J.C.; Wright, C.W.; Clayton, T.D.; Nayegandhi, A.

2004-01-01

The NASA Experimental Advanced Airborne Research Lidar (EAARL), a temporal waveform-resolving, airborne, green wavelength LIDAR (light detection and ranging), is designed to measure the submeter-scale topography of shallow reef substrates. Topographic variability is a prime component of habitat complexity, an ecological factor that both expresses and controls the abundance and distribution of many reef organisms. Following the acquisition of EAARL coverage over both mid-platform patch reefs and shelf-margin bank reefs within Biscayne National Park in August 2002, EAARL-based optical indices of topographic variability were evaluated at 15 patch reef and bank reef sites. Several sites were selected to match reefs previously evaluated in situ along underwater video and belt transects. The analysis used large populations of submarine topographic transects derived from the examination of closely spaced laser spot reflections along LIDAR raster scans. At all 15 sites, each LIDAR transect was evaluated separately to determine optical rugosity (Rotran), and the average elevation difference between adjacent points (Av(??E ap)). Further, the whole-site mean and maximum values of Ro tran and Av(??Eap) for the entire population of transects at each analysis site, along with their standard deviations, were calculated. This study revealed that the greater habitat complexity of inshore patch reefs versus outer bank reefs results in relative differences in topographic complexity that can be discerned in the laser returns. Accordingly, LIDAR sensing of optical rugosity is proposed as a complementary new technique for the rapid assessment of shallow coral reefs. ?? Springer-Verlag 2004.

Quantification of Boat Visitation Rates at Artificial and Natural Reefs in the Eastern Gulf of Mexico Using Acoustic Recorders.

PubMed

Simard, Peter; Wall, Kara R; Mann, David A; Wall, Carrie C; Stallings, Christopher D

2016-01-01

Artificial reefs are commonly used as a management tool, in part to provide ecosystem services, including opportunities for recreational fishing and diving. Quantifying the use of artificial reefs by recreational boaters is essential for determining their value as ecosystem services. In this study, four artificial-natural reef pairs in the eastern Gulf of Mexico (off western Florida) were investigated for boat visitation rates using autonomous acoustic recorders. Digital SpectroGram (DSG) recorders were used to collect sound files from April 2013 to March 2015. An automatic detection algorithm was used to identify boat noise in individual files using the harmonic peaks generated by boat engines, and by comparing the sound amplitude of each file with surrounding files. In all four pairs, visitation rates were significantly higher at the artificial reef than the natural reef. This increase in boat visitation was likely due to actual or perceived increased quality of fishing and diving at the artificial reefs, or to lack of knowledge of the presence or locations of the natural reefs. Inshore reefs (<15 m depth) had high variability in monthly visitation rates, which were generally highest in warmer months. However the seasonal signal was dampened on offshore reefs (>25 m depth). This study appears to be the first to use acoustic data to measure participant use of boating destinations, and highlights the utility of acoustic monitoring for the valuation of this important ecosystem service provided by artificial reefs.

Drought Increases Consumer Pressure on Oyster Reefs in Florida, USA

PubMed Central

Garland, Hanna G.; Kimbro, David L.

2015-01-01

Coastal economies and ecosystems have historically depended on oyster reefs, but this habitat has declined globally by 85% because of anthropogenic activities. In a Florida estuary, we investigated the cause of newly reported losses of oysters. We found that the oyster reefs have deteriorated from north to south and that this deterioration was positively correlated with the abundance of carnivorous conchs and water salinity. In experiments across these gradients, oysters survived regardless of salinity if conchs were excluded. After determining that conchs were the proximal cause of oyster loss, we tested whether elevated water salinity was linked to conch abundance either by increasing conch growth and survivorship or by decreasing the abundance of a predator of conchs. In field experiments across a salinity gradient, we failed to detect spatial variation in predation on conchs or in conch growth and survivorship. A laboratory experiment, however, demonstrated the role of salinity by showing that conch larvae failed to survive at low salinities. Because this estuary’s salinity increased in 2006 in response to reduced inputs of freshwater, we concluded that the ultimate cause of oyster decline was an increase in salinity. According to records from 2002 to 2012, oyster harvests have remained steady in the northernmost estuaries of this ecoregion (characterized by high reef biomass, low salinity, and low conch abundance) but have declined in the southernmost estuaries (characterized by lower reef biomass, increases in salinity, and increases in conch abundance). Oyster conservation in this ecoregion, which is probably one of the few that still support viable oyster populations, may be undermined by drought-induced increases in salinity causing an increased abundance of carnivorous conchs. PMID:26275296

The stable oxygen and carbon isotopic record from a coral growing in Florida Bay: a 160 year record of climatic and anthropogenic influence

USGS Publications Warehouse

Swart, Peter K.; Healy, Genevieve F.; Dodge, Richard E.; Kramer, Philip; Hudson, J. Harold; Halley, Robert B.; Robblee, Michael B.

1996-01-01

A 160 year record of skeletal δ13C and δ18O was examined in a specimen of the coral Solenastrea bournonigrowing in Florida Bay. Variations in the δ18O of the skeleton can be correlated to changes in salinity while changes in the δ13C reflect cycling of organic material within the Bay. Based on the correlation between salinity and skeletal δ18O, we have concluded that there has been no long term increase in salinity in this area of Florida Bay over the past 160 years. Using salinity correlations between the various basins obtained from instrumental data, we have been able to extend our interpretations to other parts of Florida Bay reaching similar conclusions. In contrast to current ideas which have focused on changes in Florida Bay water quality over the past 20-yr history of the Bay as causative in its decline, we have determined that changes in water quality in this basin were already set in motion between 1905 and 1912 by the construction of the Florida East Coast Railway from Miami to Key West. The construction of the railway resulted in the restriction of the exchange of water between the Florida reef tract and the Gulf of Mexico causing Florida Bay to become more eutrophic. Evidence of this process is observed in the sudden shift to relatively lower δ13C values coincident with railway construction. Natural events also appear to have influenced the water in the Bay. Between 1912 and 1948 frequent hurricanes had the effect of increasing exchange of water between the Bay and reef tract and removing large quantities of organic rich sediments. However, since 1948 the number of hurricanes affecting the area has decreased and the products of the oxidation of organic material have been increasingly retained within the basin promoting the initiation of eutrophic conditions.

Relationships between reef fish communities and remotely sensed rugosity measurements in Biscayne National Park, Florida, USA

USGS Publications Warehouse

Kuffner, Ilsa B.; Brock, John C.; Grober-Dunsmore, Rikki; Bonito, Victor E.; Hickey, T. Donald; Wright, C. Wayne

2007-01-01

The realization that coral reef ecosystem management must occur across multiple spatial scales and habitat types has led scientists and resource managers to seek variables that are easily measured over large areas and correlate well with reef resources. Here we investigate the utility of new technology in airborne laser surveying (NASA Experimental Advanced Airborne Research Lidar (EAARL)) in assessing topographical complexity (rugosity) to predict reef fish community structure on shallow (n = 10–13 per reef). Rugosity at each station was assessed in situ by divers using the traditional chain-transect method (10-m scale), and remotely using the EAARL submarine topography data at multiple spatial scales (2, 5, and 10 m). The rugosity and biological datasets were analyzed together to elucidate the predictive power of EAARL rugosity in describing the variance in reef fish community variables and to assess the correlation between chain-transect and EAARL rugosity. EAARL rugosity was not well correlated with chain-transect rugosity, or with species richness of fishes (although statistically significant, the amount of variance explained by the model was very low). Variance in reef fish community attributes was better explained in reef-by-reef variability than by physical variables. However, once the reef-by-reef variability was taken into account in a two-way analysis of variance, the importance of rugosity could be seen on individual reefs. Fish species richness and abundance were statistically higher at high rugosity stations compared to medium and low rugosity stations, as predicted by prior ecological research. The EAARL shows promise as an important mapping tool for reef resource managers as they strive to inventory and protect coral reef resources.

Specialist and generalist symbionts show counterintuitive levels of genetic diversity and discordant demographic histories along the Florida Reef Tract

NASA Astrophysics Data System (ADS)

Titus, Benjamin M.; Daly, Marymegan

2017-03-01

Specialist and generalist life histories are expected to result in contrasting levels of genetic diversity at the population level, and symbioses are expected to lead to patterns that reflect a shared biogeographic history and co-diversification. We test these assumptions using mtDNA sequencing and a comparative phylogeographic approach for six co-occurring crustacean species that are symbiotic with sea anemones on western Atlantic coral reefs, yet vary in their host specificities: four are host specialists and two are host generalists. We first conducted species discovery analyses to delimit cryptic lineages, followed by classic population genetic diversity analyses for each delimited taxon, and then reconstructed the demographic history for each taxon using traditional summary statistics, Bayesian skyline plots, and approximate Bayesian computation to test for signatures of recent and concerted population expansion. The genetic diversity values recovered here contravene the expectations of the specialist-generalist variation hypothesis and classic population genetics theory; all specialist lineages had greater genetic diversity than generalists. Demography suggests recent population expansions in all taxa, although Bayesian skyline plots and approximate Bayesian computation suggest the timing and magnitude of these events were idiosyncratic. These results do not meet the a priori expectation of concordance among symbiotic taxa and suggest that intrinsic aspects of species biology may contribute more to phylogeographic history than extrinsic forces that shape whole communities. The recovery of two cryptic specialist lineages adds an additional layer of biodiversity to this symbiosis and contributes to an emerging pattern of cryptic speciation in the specialist taxa. Our results underscore the differences in the evolutionary processes acting on marine systems from the terrestrial processes that often drive theory. Finally, we continue to highlight the Florida Reef Tract as an important biodiversity hotspot.

Detecting sedimentation impacts to coral reefs resulting from dredging the Port of Miami, Florida USA.

PubMed

Miller, Margaret W; Karazsia, Jocelyn; Groves, Carolyn E; Griffin, Sean; Moore, Tom; Wilber, Pace; Gregg, Kurtis

2016-01-01

The federal channel at Port of Miami, Florida, USA, was dredged between late 2013 and early 2015 to widen and deepen the channel. Due to the limited spatial extent of impact-assessment monitoring associated with the project, the extent of the dredging impacts on surrounding coral reefs has not been well quantified. Previously published remote sensing analyses, as well as agency and anecdotal reports suggest the most severe and largest area of sedimentation occurred on a coral reef feature referred to as the Inner Reef, particularly in the sector north of the channel. A confounding regional warm-water mass bleaching event followed by a coral disease outbreak during this same time frame made the assessment of dredging-related impacts to coral reefs adjacent to the federal channel difficult but still feasible. The current study sought to better understand the sedimentation impacts that occurred in the coral reef environment surrounding Port of Miami, to distinguish those impacts from other regional events or disturbances, and provide supplemental information on impact assessment that will inform discussions on compensatory mitigation requirements. To this end, in-water field assessments conducted after the completion of dredging and a time series analysis of tagged corals photographed pre-, during, and post-dredging, are used to discern dredging-related sedimentation impacts for the Inner Reef north. Results indicate increased sediment accumulation, severe in certain times and places, and an associated biological response (e.g., higher prevalence of partial mortality of corals) extended up to 700 m from the channel, whereas project-associated monitoring was limited to 50 m from the channel. These results can contribute to more realistic prediction of areas of indirect effect from dredging projects needed to accurately evaluate proposed projects and design appropriate compliance monitoring. Dredging projects near valuable and sensitive habitats subject to local and global stressors require monitoring methods capable of discerning non-dredging related impacts and adaptive management to ensure predicted and unpredicted project-related impacts are quantified. Anticipated increasing frequency and intensity of seasonal warming stress also suggests that manageable- but- unavoidable local stressors such as dredging should be partitioned from such seasonal thermal stress events.

Detecting sedimentation impacts to coral reefs resulting from dredging the Port of Miami, Florida USA

PubMed Central

Groves, Carolyn E.; Griffin, Sean; Moore, Tom; Wilber, Pace; Gregg, Kurtis

2016-01-01

The federal channel at Port of Miami, Florida, USA, was dredged between late 2013 and early 2015 to widen and deepen the channel. Due to the limited spatial extent of impact-assessment monitoring associated with the project, the extent of the dredging impacts on surrounding coral reefs has not been well quantified. Previously published remote sensing analyses, as well as agency and anecdotal reports suggest the most severe and largest area of sedimentation occurred on a coral reef feature referred to as the Inner Reef, particularly in the sector north of the channel. A confounding regional warm-water mass bleaching event followed by a coral disease outbreak during this same time frame made the assessment of dredging-related impacts to coral reefs adjacent to the federal channel difficult but still feasible. The current study sought to better understand the sedimentation impacts that occurred in the coral reef environment surrounding Port of Miami, to distinguish those impacts from other regional events or disturbances, and provide supplemental information on impact assessment that will inform discussions on compensatory mitigation requirements. To this end, in-water field assessments conducted after the completion of dredging and a time series analysis of tagged corals photographed pre-, during, and post-dredging, are used to discern dredging-related sedimentation impacts for the Inner Reef north. Results indicate increased sediment accumulation, severe in certain times and places, and an associated biological response (e.g., higher prevalence of partial mortality of corals) extended up to 700 m from the channel, whereas project-associated monitoring was limited to 50 m from the channel. These results can contribute to more realistic prediction of areas of indirect effect from dredging projects needed to accurately evaluate proposed projects and design appropriate compliance monitoring. Dredging projects near valuable and sensitive habitats subject to local and global stressors require monitoring methods capable of discerning non-dredging related impacts and adaptive management to ensure predicted and unpredicted project-related impacts are quantified. Anticipated increasing frequency and intensity of seasonal warming stress also suggests that manageable- but- unavoidable local stressors such as dredging should be partitioned from such seasonal thermal stress events. PMID:27896036

REGIONAL MONITORING OF CORAL CONDITION IN THE FLORIDA KEYS

EPA Science Inventory

Tropical reef corals have experienced unprecedented levels of bleaching and disease during the last three decades. Declining health has been attributed to several stressors, including exposures to elevated water temperature, increased solar radiation, and degraded water quality. ...

Guidelines for Setting Up an Extended Field Trip to Florida and the Florida Keys: An Interactive Experiential Training Field Biology Program Consisting of Pretrip Instruction, Search Image Training, Field Exercises, and Observations of Tropical Habitats and Coral Reefs.

ERIC Educational Resources Information Center

Baker, Claude D.; And Others

The importance of experiential aspects of biological study is addressed using multi-dimensional classroom and field classroom approaches to student learning. This document includes a guide to setting up this style of field experience. Several teaching innovations are employed to introduce undergraduate students to the literature, techniques, and…

KSC-03pd1379

NASA Image and Video Library

2003-05-02

KENNEDY SPACE CENTER, FLA. - Andrew Shepard, expedition leader, National Undersea Research Center, University of North Carolina at Wilmington, N. Car., poses on deck of the Liberty Star with some of the equipment to be used in the Oculina Banks project. The ship will be the site of an undersea expedition to characterize the condition of the deep-sea coral reefs and reef fish populations in the Oculina Banks, a marine protected area, 20 miles offshore of the east coast of Florida. He and other scientists will be deploying an underwater robot, a seafloor sampler, and the Passive Acoustic Monitoring System (PAMS). Dr. Grant Gilmore was co-principle investigator of the PAMS, originally developed by NASA to monitor the impact of rocket launches on wildlife refuge lagoons at KSC. The research is sponsored by NOAA Fisheries. The ship departed from Port Canaveral April 29 and will return May 9.

Geologic assessment of undiscovered oil and gas resources—Lower Cretaceous Albian to Upper Cretaceous Cenomanian carbonate rocks of the Fredericksburg and Washita Groups, United States Gulf of Mexico Coastal Plain and State Waters

USGS Publications Warehouse

Swanson, Sharon M.; Enomoto, Catherine B.; Dennen, Kristin O.; Valentine, Brett J.; Cahan, Steven M.

2017-02-10

In 2010, the U.S. Geological Survey (USGS) assessed Lower Cretaceous Albian to Upper Cretaceous Cenomanian carbonate rocks of the Fredericksburg and Washita Groups and their equivalent units for technically recoverable, undiscovered hydrocarbon resources underlying onshore lands and State Waters of the Gulf Coast region of the United States. This assessment was based on a geologic model that incorporates the Upper Jurassic-Cretaceous-Tertiary Composite Total Petroleum System (TPS) of the Gulf of Mexico basin; the TPS was defined previously by the USGS assessment team in the assessment of undiscovered hydrocarbon resources in Tertiary strata of the Gulf Coast region in 2007. One conventional assessment unit (AU), which extends from south Texas to the Florida panhandle, was defined: the Fredericksburg-Buda Carbonate Platform-Reef Gas and Oil AU. The assessed stratigraphic interval includes the Edwards Limestone of the Fredericksburg Group and the Georgetown and Buda Limestones of the Washita Group. The following factors were evaluated to define the AU and estimate oil and gas resources: potential source rocks, hydrocarbon migration, reservoir porosity and permeability, traps and seals, structural features, paleoenvironments (back-reef lagoon, reef, and fore-reef environments), and the potential for water washing of hydrocarbons near outcrop areas.In Texas and Louisiana, the downdip boundary of the AU was defined as a line that extends 10 miles downdip of the Lower Cretaceous shelf margin to include potential reef-talus hydrocarbon reservoirs. In Mississippi, Alabama, and the panhandle area of Florida, where the Lower Cretaceous shelf margin extends offshore, the downdip boundary was defined by the offshore boundary of State Waters. Updip boundaries of the AU were drawn based on the updip extent of carbonate rocks within the assessed interval, the presence of basin-margin fault zones, and the presence of producing wells. Other factors evaluated were the middle Cenomanian sea-level fall and erosion that removed large portions of platform and platform-margin carbonate sediments in the Washita Group of central Louisiana. The production history of discovered reservoirs and well data within the AU were examined to estimate the number and size of undiscovered oil and gas reservoirs within the AU. Using the USGS National Oil and Gas Assessment resource assessment methodology, mean volumes of 40 million barrels of oil, 622 billion cubic feet of gas, and 14 million barrels of natural gas liquids are the estimated technically recoverable undiscovered resources for the Fredericksburg-Buda Carbonate Platform-Reef Gas and Oil AU.

75 FR 952 - Draft Marine Sanitation Device Discharge Regulations for the Florida Keys National Marine...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-07

... supports over 6,000 species of plants, fishes, and invertebrates, including the Nation's only living coral reef that lies adjacent to the continent. The area includes one of the largest seagrass communities in...

QUALITY ASSURANCE MEASURES ASSOCIATED WITH CORAL REEF MONITORING

EPA Science Inventory

Systematic efforts began in 1997 to assess the incidence of coral diseases in the Florida Keys. Protocols were developed for the selection of permanent stations and for data collection methodology. Permanent stations and for data collection methodology. Permanent stations were es...

Patch reef modeling: a comparison of Devonian and recent examples

DOE Office of Scientific and Technical Information (OSTI.GOV)

Precht, W.F.

In reef research, models have been developed to define variations in the lithic and biotic development of facies. Walker and Alberstadt, and Hoffman and Narkiewicz developed models for growth of ancient reef communities. Although these models form a solid foundation by which patch reefs can be classed and zoned, they are neither complete nor accurate for all reef types. A comparison was made of Lower Devonian patch reefs from the Appalachian basin of New York, New Jersey, and Pennsylvania, and Holocene examples from the Bahamas and Florida Keys to identify the structure, orientation, community variability, and succession of the reefmore » biofacies. The complexion and genesis of the carbonate lithofacies were also studied. Results show similarities; these include the size, areal distribution, 3-D geometry, wave-resistance potential, lateral sequences of facies, sedimentary textures and structures, vertical zonation explained by growth from low-energy to high-energy regimes, biotic diversity, growth habit and form, and postmortem alteration. Thus, when used in conjunction with the traditional models, the recent can serve as the basis for a general model which include most patch reef types. However, these models should not be used as explicit analogs for all Phanerozoic reefs. Knowing and understanding the limitations of these comparative studies are essential to a fuller comprehension of the potential for variations which exist within and between the traditional models.« less

Oyster Reefs Support Coastal Resilience by Altering Nearshore Salinity: An Observational and Modeling Study to Quantify a "Keystone" Ecosystem Service

NASA Astrophysics Data System (ADS)

Kaplan, D. A.; Olabarrieta, M.; Frederick, P.; Valle-Levinson, A.

2016-12-01

Oyster reefs provide myriad ecosystem services, including water quality improvement, fisheries and other faunal support, shoreline protection from erosion and storm surge, and economic productivity. However, their role in directing flow during non-storm conditions has been largely neglected. In regions where oyster reefs form near the mouth of estuarine rivers, they likely alter ocean-estuary exchange by acting as fresh water "dams". We hypothesize that these reefs have the potential to detain fresh water and influence salinity over extensive areas, thus providing a "keystone" ecosystem service by supporting estuarine functions that rely on the maintenance of estuarine (i.e., brackish) conditions in the near-shore environment. In this work, we investigated the effects of shore-parallel reefs on near-shore salinity using field data and hydrodynamic modeling in a degraded reef complex in Suwannee Sound (Florida, USA). Results suggested that freshwater detention by long linear chains of oyster reefs plays an important role in modulating salinities, not only in the oysters' local environment, but over extensive estuarine areas (tens of square kilometers). Field data confirmed the presence of salinity differences between landward and seaward sides of the reef, with long-term mean salinity differences of >30% between sides. Modeled results expanded experimental findings by illustrating how oyster reefs affect the lateral and offshore extent of freshwater influence. In general, the effects of simulated reefs were most pronounced when they were highest in elevation, without gaps, and when riverine discharge was low. Taken together, these results describe a poorly documented ecosystem service provided by oyster reefs; provide an estimate of the magnitude and spatial extent of this service; and offer quantitative information to help guide future oyster reef restoration.

UV EXPOSURE OF CORAL ASSEMBLAGES IN THE FLORIDA KEYS

EPA Science Inventory

Recent studies have indicated that solar radiation can be a significant stressor of coral assemblages in tropical and subtropical marine environments. Here we review the scientific literature related to the interactions of solar radiation with coral reefs, with emphasis on harm...

Demonstration of ROV Based Underwater Electromagnetic Array Technology

DTIC Science & Technology

2016-03-01

levels. In addition, South Florida experiences more hurricanes and tropical depressions than any other area in the United States. Storms are most...organisms and processes building reefs and islands of the Dry Tortugas: The Carnegie Dry Tortugas laboratory centennial celebrations (1905-2005

Demonstration of ROV-Based Underwater Electromagnetic Array Technology

DTIC Science & Technology

2016-03-01

levels. In addition, South Florida experiences more hurricanes and tropical depressions than any other area in the United States. Storms are most...organisms and processes building reefs and islands of the Dry Tortugas: The Carnegie Dry Tortugas laboratory centennial celebrations (1905-2005

Systematic Analysis of White Pox Disease in Acropora palmata of the Florida Keys and Role of Serratia marcescens

PubMed Central

Joyner, Jessica L.; Sutherland, Kathryn P.; Kemp, Dustin W.; Berry, Brett; Griffin, Ashton; Porter, James W.; Amador, Molly H. B.; Noren, Hunter K. G.

2015-01-01

White pox disease (WPD) affects the threatened elkhorn coral, Acropora palmata. Owing in part to the lack of a rapid and simple diagnostic test, there have been few systematic assessments of the prevalence of acroporid serratiosis (caused specifically by Serratia marcescens) versus general WPD signs. Six reefs in the Florida Keys were surveyed between 2011 and 2013 to determine the disease status of A. palmata and the prevalence of S. marcescens. WPD was noted at four of the six reefs, with WPD lesions found on 8 to 40% of the colonies surveyed. S. marcescens was detected in 26.9% (7/26) of the WPD lesions and in mucus from apparently healthy colonies both during and outside of disease events (9%; 18/201). S. marcescens was detected with greater frequency in A. palmata than in the overlying water column, regardless of disease status (P = 0.0177). S. marcescens could not be cultured from A. palmata but was isolated from healthy colonies of other coral species and was identified as pathogenic pulsed-field gel electrophoresis type PDR60. WPD lesions were frequently observed on the reef, but unlike in prior outbreaks, no whole-colony death was observed. Pathogenic S. marcescens was circulating on the reef but did not appear to be the primary pathogen in these recent WPD episodes, suggesting that other pathogens or stressors may contribute to signs of WPD. Results highlight the critical importance of diagnostics in coral disease investigations, especially given that field manifestation of disease may be similar, regardless of the etiological agent. PMID:25911491

Impact of exploratory wells, offshore Florida: A biological assessment

USGS Publications Warehouse

Dustan, Phillip A.; Lidz, Barbara H.; Shinn, Eugene A.

1991-01-01

Seven offshore exploratory oil well sites were examined in an effort to determine the ecological impact of exploratory drilling on the subtropical marine ecosystems of southern Florida, including seagrass beds and coral reefs. The time since drilling ranged from 2 to 29 years; water depths varied between 5 and 70 m. The major long-term ecological impact observed at these sites ranged from the creation of "artificial-reef" conditions to the physical destruction of hardbottom habitat that had not recovered in 29 years. Long-term ecological perturbation appeared to be limited to physical destruction and the deposition of drilling debris, which provided substratum for settling organisms. Significant deposits of drill muds or cuttings were not encountered at any of the sites, and there was no evidence of ecological damage from cuttings or drill muds. The results of this study pertain only to exploratory drilling that, unlike production wells that remain in place for tens of years, is a one-time perturbation to the habitat.

Oxygen and carbon isotopic growth record in a reef coral from the florida keys and a deep-sea coral from blake plateau

USGS Publications Warehouse

Emiliani, C.; Harold, Hudson J.; Shinn, E.A.; George, R.Y.

1978-01-01

Carbon and oxygen isotope analysis through a 30-year (1944 to 1974) growth of Montastrea annularis from Hen and Chickens Reef (Florida Keys) shows a strong yearly variation in the abundances of both carbon-13 and oxygen-18 and a broad inverse relationship between the two isotopes. Normal annual dense bands are formed during the summer and are characterized by heavy carbon and light oxygen. "Stress bands" are formed during particularly severe winters and are characterized by heavy carbon and heavy oxygen. The isotopic effect of Zooxanthellae metabolism dominates the temperature effect on the oxygen-18/oxygen-16 ratio. The isotopic results on the deep-sea solitary coral Bathypsammia tintinnabulum, where Zooxanthellae are nonexistent, indicates that the abundance of the heavy isotopes carbon-13 and oxygen-18 is inversely related to the growth rate, with both carbon and oxygen approaching equilibrium values with increasing skeletal age.

Rapid movement of wastewater from on-site disposal systems into surface waters in the lower Florida Keys

USGS Publications Warehouse

Paul, John H.; McLaughlin, Molly R.; Griffin, Dale W.; Lipp, Erin K.; Stokes, Rodger; Rose, Joan B.

2000-01-01

Viral tracer studies have been used previously to study the potential for wastewater contamination of surface marine waters in the Upper and Middle Florida Keys. Two bacteriophages, the marine bacteriophage φHSIC and the Salmonella phage PRD1, were used as tracers in injection well and septic tank studies in Saddlebunch Keys of the Lower Florida Keys and in septic tank studies in Boot Key Harbor, Marathon, of the Middle Keys. In Boot Key Harbor, both phages were detected in a canal adjacent to the seeded septic tank within 3 h 15 min of the end of the seed period. The tracer was then detected at all sampling sites in Boot Key Harbor, including one on the opposite side of U. S. Highway 1 in Florida Bay, and at an Atlantic Ocean beach outside Boot Key Harbor. Rates of migration based on first appearance of the phage ranged from 1.7 to 57.5 m h-1. In Saddlebunch Keys, φHSIC and PRD1 were used to seed a residential septic tank and a commercial injection well. The septic tank tracer was not found in any surface water samples. The injection well tracer was first detected at a site most distant from the seed site, a channel that connected Sugarloaf Sound with the Atlantic Ocean. The rate of tracer migration from the injection well to this channel ranged from 66.8 to 141 m h-1. Both tracer studies showed a rapid movement of wastewater from on-site sewage treatment and disposal systems in a southeasterly direction toward the reef tract and Atlantic Ocean, with preferential movement through tidal channels. These studies indicate that wastewater disposal systems currently in widespread use in the Florida Keys can rapidly contaminate the marine environment.

Climate change projected effects on coastal foundation communities of the Greater Everglades using a 2060 scenario: need for a new management paradigm.

PubMed

Koch, M S; Coronado, C; Miller, M W; Rudnick, D T; Stabenau, E; Halley, R B; Sklar, F H

2015-04-01

Rising sea levels and temperature will be dominant drivers of coastal Everglades' foundation communities (i.e., mangrove forests, seagrass/macroalgae, and coral reefs) by 2060 based on a climate change scenario of +1.5 °C temperature, +1.5 foot (46 cm) in sea level, ±10 % in precipitation and 490 ppm CO2. Current mangrove forest soil elevation change in South Florida ranges from 0.9 to 2.5 mm year(-1) and would have to increase twofold to fourfold in order to accommodate a 2060 sea level rise rate. No evidence is available to indicate that coastal mangroves from South Florida and the wider Caribbean can keep pace with a rapid rate of sea level rise. Thus, particles and nutrients from destabilized coastlines could be mobilized and impact benthic habitats of southern Florida. Uncertainties in regional geomorphology and coastal current changes under higher sea levels make this prediction tentative without further research. The 2060 higher temperature scenario would compromise Florida's coral reefs that are already degraded. We suggest that a new paradigm is needed for resource management under climate change that manages coastlines for resilience to marine transgression and promotes active ecosystem management. In the case of the Everglades, greater freshwater flows could maximize mangrove peat accumulation, stabilize coastlines, and limit saltwater intrusion, while specific coral species may require propagation. Further, we suggest that regional climate drivers and oceanographic processes be incorporated into Everglades and South Florida management plans, as they are likely to impact coastal ecosystems, interior freshwater wetlands and urban coastlines over the next few decades.

Evaluating the distribution of terrestrial dissolved organic matter in a complex coastal ecosystem using fluorescence spectroscopy

NASA Astrophysics Data System (ADS)

Yamashita, Youhei; Boyer, Joseph N.; Jaffé, Rudolf

2013-09-01

The coastal zone of the Florida Keys features the only living coral reef in the continental United States and as such represents a unique regional environmental resource. Anthropogenic pressures combined with climate disturbances such as hurricanes can affect the biogeochemistry of the region and threaten the health of this unique ecosystem. As such, water quality monitoring has historically been implemented in the Florida Keys, and six spatially distinct zones have been identified. In these studies however, dissolved organic matter (DOM) has only been studied as a quantitative parameter, and DOM composition can be a valuable biogeochemical parameter in assessing environmental change in coastal regions. Here we report the first data of its kind on the application of optical properties of DOM, in particular excitation emission matrix fluorescence with parallel factor analysis (EEM-PARAFAC), throughout these six Florida Keys regions in an attempt to assess spatial differences in DOM sources. Our data suggests that while DOM in the Florida Keys can be influenced by distant terrestrial environments such as the Everglades, spatial differences in DOM distribution were also controlled in part by local surface runoff/fringe mangroves, contributions from seasgrass communities, as well as the reefs and waters from the Florida Current. Application of principal component analysis (PCA) of the relative abundance of EEM-PARAFAC components allowed for a clear distinction between the sources of DOM (allochthonous vs. autochthonous), between different autochthonous sources and/or the diagenetic status of DOM, and further clarified contribution of terrestrial DOM in zones where levels of DOM were low in abundance. The combination between EEM-PARAFAC and PCA proved to be ideally suited to discern DOM composition and source differences in coastal zones with complex hydrology and multiple DOM sources.

Sponge communities on Caribbean coral reefs are structured by factors that are top-down, not bottom-up.

PubMed

Pawlik, Joseph R; Loh, Tse-Lynn; McMurray, Steven E; Finelli, Christopher M

2013-01-01

Caribbean coral reefs have been transformed in the past few decades with the demise of reef-building corals, and sponges are now the dominant habitat-forming organisms on most reefs. Competing hypotheses propose that sponge communities are controlled primarily by predatory fishes (top-down) or by the availability of picoplankton to suspension-feeding sponges (bottom-up). We tested these hypotheses on Conch Reef, off Key Largo, Florida, by placing sponges inside and outside predator-excluding cages at sites with less and more planktonic food availability (15 m vs. 30 m depth). There was no evidence of a bottom-up effect on the growth of any of 5 sponge species, and 2 of 5 species grew more when caged at the shallow site with lower food abundance. There was, however, a strong effect of predation by fishes on sponge species that lacked chemical defenses. Sponges with chemical defenses grew slower than undefended species, demonstrating a resource trade-off between growth and the production of secondary metabolites. Surveys of the benthic community on Conch Reef similarly did not support a bottom-up effect, with higher sponge cover at the shallower depth. We conclude that the structure of sponge communities on Caribbean coral reefs is primarily top-down, and predict that removal of sponge predators by overfishing will shift communities toward faster-growing, undefended species that better compete for space with threatened reef-building corals.

Sponge Communities on Caribbean Coral Reefs Are Structured by Factors That Are Top-Down, Not Bottom-Up

PubMed Central

Pawlik, Joseph R.; Loh, Tse-Lynn; McMurray, Steven E.; Finelli, Christopher M.

2013-01-01

Caribbean coral reefs have been transformed in the past few decades with the demise of reef-building corals, and sponges are now the dominant habitat-forming organisms on most reefs. Competing hypotheses propose that sponge communities are controlled primarily by predatory fishes (top-down) or by the availability of picoplankton to suspension-feeding sponges (bottom-up). We tested these hypotheses on Conch Reef, off Key Largo, Florida, by placing sponges inside and outside predator-excluding cages at sites with less and more planktonic food availability (15 m vs. 30 m depth). There was no evidence of a bottom-up effect on the growth of any of 5 sponge species, and 2 of 5 species grew more when caged at the shallow site with lower food abundance. There was, however, a strong effect of predation by fishes on sponge species that lacked chemical defenses. Sponges with chemical defenses grew slower than undefended species, demonstrating a resource trade-off between growth and the production of secondary metabolites. Surveys of the benthic community on Conch Reef similarly did not support a bottom-up effect, with higher sponge cover at the shallower depth. We conclude that the structure of sponge communities on Caribbean coral reefs is primarily top-down, and predict that removal of sponge predators by overfishing will shift communities toward faster-growing, undefended species that better compete for space with threatened reef-building corals. PMID:23667492

MEETING AT PORTLAND, OR: CORAL RESPONSES TO CLIMATE AND LAND USE CHANGES

EPA Science Inventory

Coral reefs in the Florida Keys have been surveyed for occurrence of bleaching and disease, and additional indicators are being applied across the Keys to characterize the status of coral condition. Studies on cultured symbiotic algae have demonstrated combined effects of tempera...

INFLUENCE OF FRESHWATER INFLOW AND WATER MANAGEMENT ON OYSTER-REEF RESIDENT ORGANISMS: IMPLICATIONS FOR ECOSYSTEM RESTORATION.

EPA Science Inventory

Two sources of seasonal programming are at work in southwest Florida estuaries: variation in temperature and variation in rainfall and water release resulting in downstream variations in salinity. Since more significant correlations were detected between salinity and metrics than...

A giant sediment trap in the Florida keys

USGS Publications Warehouse

Shinn, E.A.; Reich, C.D.; Locker, S.D.; Hine, A.C.

1996-01-01

Aerial photography, high-resolution seismic profiling, coring and jet probing have revealed a large sediment-filled sinkhole in the Key Largo National Marine Sanctuary off Key Largo, Florida. The 600-m-diameter feature straddles coral reef and carbonate-sand facies and contains >55 m of marine lime sand and aragonite mud. Bulk 14C age determinations of mud from a 30- m sediment core indicate infilling rates exceeding 20 m/ka between 3 and 5.6 ka. The total thickness and nature of the sediment near the base of the sinkhole are not known.

Flow-sediment-oyster interaction around degraded, restored, and reference oyster reefs in Florida's Indian River Lagoon

NASA Astrophysics Data System (ADS)

Kitsikoudis, V.; Kibler, K. M.; Spiering, D. W.

2017-12-01

This study analyzes flow patterns and sediment distributions around three oyster reefs in a bar-built estuarine lagoon. We studied a degraded reef, a recently restored reef, and a reference condition reef with a healthy live oyster community. The restored reef had been regraded and restored with oyster shell mats to aid in recruitment of oyster spat, with the goal of reestablishing a healthy oyster community. Despite the fact that flow-biota-sediment interaction constitutes a blossoming research field, actual field data are sparse and current knowledge emanates from flume studies and numerical modeling. Moreover, the hydraulic effect of restored oyster reefs has not been thoroughly investigated and it is not clear if the flow field and sediment erosion/deposition are similar or diverge from natural reefs. Instantaneous three-dimensional flow velocities were collected on reefs using a Nortek Vectrino Profiler and an acoustic Doppler current profiler (Nortek Aquadopp). The former measured a 2 - 3 cm velocity profile above the oyster bed, while the latter quantified incoming velocities across the flow profile approximately 10 m from the edge of the reef. Flow measurements were conducted during rising tides and are coupled with simultaneous wind speed and direction data. In addition, 20 cm deep sediment cores were retrieved on and off the investigated reefs. Sediment grain size distributions were determined after individual cores were processed for loss on ignition. Incoming flow velocities were as high as 10 cm/s, relatively higher than those recorded close to reefs. Mean and turbulent flow velocities close to the reefs, varied among the investigated sites, despite the similar wind flow conditions offshore. For instance, the measurements at the degraded reef showed decreased wave attenuation and augmented flow velocities compared to the other sites. Boat wakes exhibited a very distinct signal in the flow velocity time-series and significantly increased the approaching flow velocity at the reefs. The oyster roughness height at the restored reef (68 mm) was higher than the roughness at the reference reef (45 mm); however, the variance was higher at the latter. Sediments from degraded reef and the recently restored reef were coarser and contained less organic matter compared to the reference condition reef.

50 CFR 622.3 - Relation to other laws and regulations.

Code of Federal Regulations, 2014 CFR

2014-10-01

... section. (b) Except for regulations on allowable octocoral, Gulf and South Atlantic prohibited coral, and... application. Regulations on allowable octocoral, Gulf and South Atlantic prohibited coral, and live rock do...) Florida Keys National Marine Sanctuary (15 CFR part 922, subpart P). (2) Gray's Reef National Marine...

50 CFR 622.3 - Relation to other laws and regulations.

Code of Federal Regulations, 2013 CFR

2013-10-01

... section. (b) Except for regulations on allowable octocoral, Gulf and South Atlantic prohibited coral, and... application. Regulations on allowable octocoral, Gulf and South Atlantic prohibited coral, and live rock do...) Florida Keys National Marine Sanctuary (15 CFR part 922, subpart P). (2) Gray's Reef National Marine...

Regional Monitoring of Coral Condition in the Florida Keys

Treesearch

William S. Fisher; Deborah L. Santavy; William P. Davis; Lee A. Courtney

2006-01-01

Tropical reef corals have experienced unprecedented levels of bleaching and disease during the last three decades. Declining health has been attributed to several stressors, including exposures to elevated water temperature, increased solar radiation, and degraded water quality. Consequences of coral bleaching and disease vary; some recover, while others lose tissue,...

TECHNIQUES FOR DETERMINING UV EXPOSURE IN COASTAL WATERS: CASE STUDY IN SOUTH FLORIDA

EPA Science Inventory

The photosynthesis of coral reefs is inhibited by solar ultraviolet (UV) radiation and UV in combination with unusually high sea surface temperatures is believed to play an important role in coral bleaching. In this presentation we use a new technique based on remotely sensed oce...

DISTRIBUTION AND FREQUENCY OF CORAL DISEASES IN THE FLORIDA KEYS AND THE DRY TORTUGAS

EPA Science Inventory

Reports of coral diseases affecting reefs in the Western Atlantic have been increasing. Few studies have attempted to document the incidences of different coral diseases in a single geographic area. Most studies have focused on a single disease within a small geographic area. Thi...

Seasonal regulation of herbivory and nutrient effects on macroalgal recruitment and succession in a Florida coral reef

PubMed Central

Collado-Vides, Ligia; Burkepile, Deron E.

2016-01-01

Herbivory and nutrient enrichment are drivers of benthic dynamics of coral reef macroalgae; however, their impact may vary seasonally. In this study we evaluated the effects of herbivore pressure, nutrient availability and potential propagule supply on seasonal recruitment and succession of macroalgal communities on a Florida coral reef. Recruitment tiles, replaced every three months, and succession tiles, kept in the field for nine months, were established in an ongoing factorial nutrient enrichment-herbivore exclusion experiment. The ongoing experiment had already created very different algal communities across the different herbivory and nutrient treatments. We tracked algal recruitment, species richness, and species abundance through time. Our results show seasonal variation in the effect of herbivory and nutrient availability on recruitment of coral reef macroalgae. In the spring, when there was higher macroalgal species richness and abundance of recruits, herbivory appeared to have more control on macroalgal community structure than did nutrients. In contrast, there was no effect of either herbivory or nutrient enrichment on macroalgal communities on recruitment tiles in cooler seasons. The abundance of recruits on tiles was positively correlated with the abundance of algal in the ongoing, established experiment, suggesting that propagule abundance is likely a strong influence on algal recruitment and early succession. Results of the present study suggest that abundant herbivorous fishes control recruitment and succession of macroalgae, particularly in the warm season when macroalgal growth is higher. However, herbivory appears less impactful on algal recruitment and community dynamics in cooler seasons. Ultimately, our data suggest that the timing of coral mortality (e.g., summer vs. winter mortality) and freeing of benthic space may strongly influence the dynamics of algae that colonize open space. PMID:27833810

The last interglacial period at Guantanamo Bay, Cuba and an estimate of late Quaternary tectonic uplift rate in a strike-slip regime

NASA Astrophysics Data System (ADS)

Schweig, E. S.; Muhs, D. R.; Simmons, K. R.; Halley, R. B.

2015-12-01

Guantanamo Bay, Cuba is an area dominated by a strike-slip tectonic regime and is therefore expected to have very low Quaternary uplift rates. We tested this hypothesis by study of an unusually well preserved emergent reef terrace around the bay. Up to 12 m of unaltered, growth-position reef corals are exposed at about 40 sections examined around ˜40 km of coastline. Maximum reef elevations in the protected, inner part of the bay are ˜11-12 m, whereas outer-coast shoreline angles of wave-cut benches are as high as ˜14 m. Fifty uranium-series analyses of unrecrystallized corals from six localities yield ages ranging from ˜134 ka to ˜115 ka, when adjusted for small biases due to slightly elevated initial 234U/238U values. Thus, ages of corals correlate this reef to the peak of the last interglacial period, marine isotope stage (MIS) 5.5. Previously, we dated the Key Largo Limestone to the same high-sea stand in the tectonically stable Florida Keys. Estimates of paleo-sea level during MIS 5.5 in the Florida Keys are ~6.6 to 8.3 m above present. Assuming a similar paleo-sea level in Cuba, this yields a long-term tectonic uplift rate of 0.04-0.06 m/ka over the past ~120 ka. This estimate supports the hypothesis that the tectonic uplift rate should be low in this strike-slip regime. Nevertheless, on the southeast coast of Cuba, east of our study area, we have observed flights of multiple marine terraces, suggesting either (1) a higher uplift rate or (2) an unusually well-preserved record of pre-MIS 5.5 terraces not observed at Guantanamo Bay.

Systematic Analysis of White Pox Disease in Acropora palmata of the Florida Keys and Role of Serratia marcescens.

PubMed

Joyner, Jessica L; Sutherland, Kathryn P; Kemp, Dustin W; Berry, Brett; Griffin, Ashton; Porter, James W; Amador, Molly H B; Noren, Hunter K G; Lipp, Erin K

2015-07-01

White pox disease (WPD) affects the threatened elkhorn coral, Acropora palmata. Owing in part to the lack of a rapid and simple diagnostic test, there have been few systematic assessments of the prevalence of acroporid serratiosis (caused specifically by Serratia marcescens) versus general WPD signs. Six reefs in the Florida Keys were surveyed between 2011 and 2013 to determine the disease status of A. palmata and the prevalence of S. marcescens. WPD was noted at four of the six reefs, with WPD lesions found on 8 to 40% of the colonies surveyed. S. marcescens was detected in 26.9% (7/26) of the WPD lesions and in mucus from apparently healthy colonies both during and outside of disease events (9%; 18/201). S. marcescens was detected with greater frequency in A. palmata than in the overlying water column, regardless of disease status (P = 0.0177). S. marcescens could not be cultured from A. palmata but was isolated from healthy colonies of other coral species and was identified as pathogenic pulsed-field gel electrophoresis type PDR60. WPD lesions were frequently observed on the reef, but unlike in prior outbreaks, no whole-colony death was observed. Pathogenic S. marcescens was circulating on the reef but did not appear to be the primary pathogen in these recent WPD episodes, suggesting that other pathogens or stressors may contribute to signs of WPD. Results highlight the critical importance of diagnostics in coral disease investigations, especially given that field manifestation of disease may be similar, regardless of the etiological agent. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Seasonal regulation of herbivory and nutrient effects on macroalgal recruitment and succession in a Florida coral reef.

PubMed

Duran, Alain; Collado-Vides, Ligia; Burkepile, Deron E

2016-01-01

Herbivory and nutrient enrichment are drivers of benthic dynamics of coral reef macroalgae; however, their impact may vary seasonally. In this study we evaluated the effects of herbivore pressure, nutrient availability and potential propagule supply on seasonal recruitment and succession of macroalgal communities on a Florida coral reef. Recruitment tiles, replaced every three months, and succession tiles, kept in the field for nine months, were established in an ongoing factorial nutrient enrichment-herbivore exclusion experiment. The ongoing experiment had already created very different algal communities across the different herbivory and nutrient treatments. We tracked algal recruitment, species richness, and species abundance through time. Our results show seasonal variation in the effect of herbivory and nutrient availability on recruitment of coral reef macroalgae. In the spring, when there was higher macroalgal species richness and abundance of recruits, herbivory appeared to have more control on macroalgal community structure than did nutrients. In contrast, there was no effect of either herbivory or nutrient enrichment on macroalgal communities on recruitment tiles in cooler seasons. The abundance of recruits on tiles was positively correlated with the abundance of algal in the ongoing, established experiment, suggesting that propagule abundance is likely a strong influence on algal recruitment and early succession. Results of the present study suggest that abundant herbivorous fishes control recruitment and succession of macroalgae, particularly in the warm season when macroalgal growth is higher. However, herbivory appears less impactful on algal recruitment and community dynamics in cooler seasons. Ultimately, our data suggest that the timing of coral mortality (e.g., summer vs. winter mortality) and freeing of benthic space may strongly influence the dynamics of algae that colonize open space.

Sensitivity of bacterioplankton nitrogen metabolism to eutrophication in sub-tropical coastal waters of Key West, Florida.

PubMed

Hoch, Matthew P; Dillon, Kevin S; Coffin, Richard B; Cifuentes, Luis A

2008-05-01

Expression of intracellular ammonium assimilation enzymes were used to assess the response of nitrogen (N) metabolism in bacterioplankton to N-loading of sub-tropical coastal waters of Key West, Florida. Specific activities of glutamine synthetase (GS) and total glutamate dehydrogenase (GDHT) were measured on the bacterial size fraction (<0.8 microm) to assess N-deplete versus N-replete metabolic states, respectively. Enzyme results were compared to concentrations of dissolved organic matter and nutrients and to the biomass and production of phytoplankton and bacteria. Concentrations of dissolved inorganic N (DIN), dissolved organic N (DON), and dissolved organic carbon (DOC) positively correlated with specific activities of GDHT and negatively correlated with that of GS. Total dissolved N (TDN) concentration explained 81% of variance in bacterioplankton GDHT:GS activity ratio. The GDHT:GS ratio, TDN, DOC, and bacterial parameters decreased in magnitude along a tidally dynamic trophic gradient from north of Key West to south at the reef tract, which is consistent with the combined effects of localized coastal eutrophication and tidal exchange of seawater from the Southwest Florida Shelf and Florida Strait. The N-replete bacterioplankton north of Key West can regenerate ammonium which sustains primary production transported south to the reef. The range in GDHT:GS ratios was 5-30 times greater than that for commonly used indicators of planktonic eutrophication, which emphasizes the sensitivity of bacterioplankton N-metabolism to changes in N-bioavailability caused by nutrient pollution in sub-tropical coastal waters and utility of GDHT:GS ratio as an bioindicator of N-replete conditions.

Invasive Lionfish (Pterosis volitans) Pose Public Health Threats.

PubMed

Diaz, James H

2015-01-01

The lionfish, Pterosis volitans, a native of Indo-Pacific oceans, is a popular saltwater aquarium fish despite venomous spines on its fins. Lionfish were inadvertently introduced into the western Atlantic from Florida in the early 1990s and have overpopulated and dispersed widely into the Caribbean Sea and Gulf of Mexico. Initiatives to control lionfish populations were launched, including the National Oceanographic and Atmospheric Administration (NOAA)-sponsored "Lionfish as Food Campaign".2 Recently, scientists from the Food and Drug Administration (FDA) reported that lionfish caught off the US Virgin Islands contained ciguatoxins and could cause ciguatera fish poisoning (CFP); a seafood-borne poisoning without an antidote or any specific treatment, and a potential for prolonged neurotoxicity. Lionfish pose several public health threats. New strategies to control the lionfish population explosion in coastal waters and offshore fisheries are needed now to ensure seafood safety and public health. The lionfish, Pterosis volitans, is native to the reefs of the western Indian and Pacific Oceans (Figure 1). Brightly colored with red, white, and black stripes and adorned with feathery fins, the lionfish is a popular saltwater aquarium fish despite venomous spines on its fins (Figure 2). Lionfish were introduced into the western North Atlantic from Florida in the early 1990s after some specimens were discarded by dissatisfied amateur aquarists and others escaped from hurricane-flooded public aquariums.1 Since lionfish are voracious carnivores, have few natural predators, and reproduce prolifically, they have overpopulated and dispersed widely from Cape Hatteras to Florida, throughout the Caribbean Sea, and into the Gulf of Mexico.1 The population density of lionfish in its new, invaded territory now exceeds that of its native habitat.1 As a result, campaigns to control lionfish populations were launched in Florida and the Caribbean. Lionfish now pose several public health threats that include (1) serving as the second most common cause of venomous fish puncture injuries next to stingrays; (2) interrupting the marine seafood chain on reef systems that support commercial fisheries; and (3) bioconcentrating heat-stable algal toxins capable of causing CFP.

Impacts of Artificial Reefs on Surrounding Ecosystems

NASA Astrophysics Data System (ADS)

Manoukian, Sarine

Artificial reefs are becoming a popular biological and management component in shallow water environments characterized by soft seabed, representing both important marine habitats and tools to manage coastal fisheries and resources. An artificial reef in the marine environment acts as an open system with exchange of material and energy, altering the physical and biological characteristics of the surrounding area. Reef stability will depend on the balance of scour, settlement, and burial resulting from ocean conditions over time. Because of the unstable nature of sediments, they require a detailed and systematic investigation. Acoustic systems like high-frequency multibeam sonar are efficient tools in monitoring the environmental evolution around artificial reefs, whereas water turbidity can limit visual dive and ROV inspections. A high-frequency multibeam echo sounder offers the potential of detecting fine-scale distribution of reef units, providing an unprecedented level of resolution, coverage, and spatial definition. How do artificial reefs change over time in relation to the coastal processes? How accurately does multibeam technology map different typologies of artificial modules of known size and shape? How do artificial reefs affect fish school behavior? What are the limitations of multibeam technology for investigating fish school distribution as well as spatial and temporal changes? This study addresses the above questions and presents results of a new approach for artificial reef seafloor mapping over time, based upon an integrated analysis of multibeam swath bathymetry data and geoscientific information (backscatter data analysis, SCUBA observations, physical oceanographic data, and previous findings on the geology and sedimentation processes, integrated with unpublished data) from Senigallia artificial reef, northwestern Adriatic Sea (Italy) and St. Petersburg Beach Reef, west-central Florida continental shelf. A new approach for observation of fish aggregations associated with Senigallia reef based on the analysis of multibeam backscatter data in the water column is also explored. The settlement of the reefs and any terrain change are investigated over time providing a useful description of the local hydrodynamics and geological processes. All the artificial structures (made up by water-based concrete for Senigallia reef and mainly steel for St. Petersburg Beach reef) are identified and those showing substantial horizontal and/or vertical movements are analyzed in detail. Most artificial modules of Senigallia reef are not intact and scour signatures are well depicted around them, indicating reversals of the local current. This is due to both the wind pattern and to the quite close arrangement of the reef units that tend to deflect the bottom flow. As regards to the St. Petersburg Beach reef, all the man-made steel units are still in their upright position. Only a large barge shows a gradual collapse of its south side, and presents well-developed scouring at its east-northeast side, indicating dominant bottom flow from west-southwest to east-northeast. While an overall seafloor depth shallowing of about 0.30 m from down-current deposits was observed for Senigallia reef, an overall deepening of about 0.08 m due to scour was observed at the St. Petersburg Beach reef. Based on the backscatter data interpretation, surficial sediments are coarser in the vicinities of both artificial reefs than corresponding surrounding sediments. Scouring reveals this coarser layer underneath the prevalent mud sediment at Senigallia reef, and the predominant silt sediment at St. Petersburg Beach reef. In the ten years of Senigalia reef study, large-scale variations between clay and silt appear to be directly linked to large flood events that have occurred just prior to the change. As regards the water column investigation, acoustic backscatter from fish aggregations gives detailed information on their morphology and spatial distribution. In addition, relative fish biomass estimates can be extrapolated. Results suggest that most of the fish aggregations are generally associated with the artificial modules showing a tendency for mid- and bottom-water depth distribution than for the surface waters. This study contributes to understanding the changes in artificial reefs over time in relation to coastal processes. Moreover, the preliminary results concerning the water column backscatter data represents progress in fisheries acoustics research as a result of three-dimensional acoustics. They demonstrate the benefits of multibeam sonar as a tool to investigate and quantify size distribution and geometry of fish aggregations associated with shallow marine habitats.

Connectivity of tropical marine ecosystems--An overview of interdisciplinary research to understand biodiversity and trophic relationships in the Virgin Islands and Puerto Rico

USGS Publications Warehouse

McClain-Counts, Jennifer P.; Demopoulos, Amanda W.J.

2012-01-01

The Virgin Islands and Puerto Rico contain marine reserves and protected areas that encompass a variety of tropical ecosystems, including coral reefs, mangroves, and seagrass beds. Reserves and protected areas are established for a variety of reasons, such as preserving nursery habitats and biodiversity, or reducing anthropogenic effects associated with pollution and land use. Questions remain regarding the effectiveness of these designated areas in preserving and protecting spatially connected habitats and associated fishes and invertebrates. Scientists from the U.S. Geological Survey (USGS), University of Florida, and Arkansas State University are collaborating on interdisciplinary research in the Virgin Islands and Puerto Rico to examine the biodiversity and trophic dynamics of fishes and invertebrates residing in connected mangroves, seagrasses, and coral reefs to discern the effectiveness of current marine reserves and protected areas for conserving reef resources.

Influence of salinity on prevalence of the parasite Loxothylacus panopaei in the xanthid Panopeus obesus in SW Florida.

PubMed

Tolley, S Gregory; Winstead, James T; Haynes, Lesli; Volety, Aswani K

2006-06-23

This study was conducted to examine the potential influence of salinity, a proxy for freshwater inflow, on the prevalence of the castrator parasite Loxothylacus panopaei on saltmarsh mud crabs Panopeus obesus on SW Florida oyster reefs. Spatial and seasonal patterns of the presence of potential host crabs and the prevalence of the parasite were assessed in the Caloosahatchee, Estero, and Faka Union estuaries. Lift nets (1 m2) containing 5 1 of oyster clusters were deployed on intertidal reefs at 3 sites along the salinity gradient of each estuary. Nets were deployed during 3 seasonally dry and 3 seasonally wet months for a period of 30 d. P. obesus densities tended to increase downstream in higher salinity waters, with crabs being absent from the upper station in the Caloosahatchee during both seasons and absent from the upper station of the Faka Union during wet months. Parasite prevalence was reduced upstream in each estuary during wet months compared to dry months, and for those estuaries that experienced higher relative levels of freshwater inflow. Furthermore, parasite prevalence was positively correlated with the mean salinity of capture of host crabs. Based on the distribution of P. obesus and the above patterns related to salinity, it appears that freshwater inflow and seasonal rains might regulate the prevalence of this parasite in SW Florida by creating spatiotemporal, low salinity refuges for its host.

Assessing the Effects of Disease and Bleaching on Florida Keys Corals by Fitting Population Models to Data

EPA Science Inventory

Coral diseases have increased in frequency over the past few decades and have important influences on the structure and composition of coral reef communities. However, there is limited information on the etiologies of many coral diseases, and pathways via which coral diseases ar...

ANTHROPOGENIC NUTRIENT ENRICHMENT OF SEAGRASS AND CORAL REEF COMMUNITIES IN THE LOWER FLORIDA KEYS, USA: DISCRIMINATION OF LOCAL VERSUS REGIONAL NITROGEN SOURCES. (R830414)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

Applying data fusion techniques for benthic habitat mapping and monitoring in a coral reef ecosystem

NASA Astrophysics Data System (ADS)

Zhang, Caiyun

2015-06-01

Accurate mapping and effective monitoring of benthic habitat in the Florida Keys are critical in developing management strategies for this valuable coral reef ecosystem. For this study, a framework was designed for automated benthic habitat mapping by combining multiple data sources (hyperspectral, aerial photography, and bathymetry data) and four contemporary imagery processing techniques (data fusion, Object-based Image Analysis (OBIA), machine learning, and ensemble analysis). In the framework, 1-m digital aerial photograph was first merged with 17-m hyperspectral imagery and 10-m bathymetry data using a pixel/feature-level fusion strategy. The fused dataset was then preclassified by three machine learning algorithms (Random Forest, Support Vector Machines, and k-Nearest Neighbor). Final object-based habitat maps were produced through ensemble analysis of outcomes from three classifiers. The framework was tested for classifying a group-level (3-class) and code-level (9-class) habitats in a portion of the Florida Keys. Informative and accurate habitat maps were achieved with an overall accuracy of 88.5% and 83.5% for the group-level and code-level classifications, respectively.

δ44/40Ca variability in shallow water carbonates and the impact of submarine groundwater discharge on Ca-cycling in marine environments

NASA Astrophysics Data System (ADS)

Holmden, C.; Papanastassiou, D. A.; Blanchon, P.; Evans, S.

2012-04-01

Shallow water carbonates from Florida Bay, the Florida Reef Tract, and a Mexican Caribbean fringing reef at Punta Maroma were studied to determine the range of Ca-isotope variation among a cohort of modern carbonate producers and to look for local-scale Ca-cycling effects. The total range of Ca-isotope fractionation is 0.4‰ at Punta Maroma, yielding an allochem-weighted average δ44/40Ca value of -1.12‰ consistent with bulk sediment from the lagoon with a value of -1.09‰. These values are virtually identical to bulk carbonate sediments from the Florida Reef Tract (-1.11‰) and from one location in Florida Bay (-1.09‰) near a tidal inlet in the Florida Keys. No evidence was found for the ∼0.6‰ fractionation between calcite and aragonite which has been observed in laboratory precipitation experiments. Combining these results with carbonate production modes and δ44/40Ca values for pelagic carbonates taken from the literature, we calculate a weighted average value of -1.12 ± 0.11‰ (2σ) for the global-scale Ca-output flux into carbonate sediments. The δ44/40Ca value of the input Ca-flux from rivers and hydrothermal fluids is -1.01 ± 0.04‰ (2σmean), calculated from literature data that have been corrected for inter-laboratory bias. Assuming that the ocean Ca cycle is in steady state, we calculate a δ44/40Ca value of -1.23 ± 0.23‰ (2σ) for submarine groundwater discharge (SGD) on a global scale. The SGD Ca-flux rivals river flows and mid-ocean ridge hydrothermal vent inputs as a source of Ca to the oceans. It has the potential to differ significantly in its isotopic value from these traditional Ca-inputs in the geological past, and to cause small changes in the δ44/40Ca value of oceans through time. In the innermost water circulation restricted region of northeastern Florida Bay, sediments and waters exhibit a 0.7‰ gradient in δ44/40Ca values decreasing towards the Florida Everglades. This lowering of δ44/40Ca is predominantly caused by local-scale Ca-inputs from SGD, which has a high Ca concentration (450 mg/L) and low δ44/40Ca value (-0.96‰). Mixing calculations show that Ca inputs from SGD and surface water runoff from the Florida Everglades contribute between 8% and 60% of the dissolved Ca to the studied waters with salinities between 30 and 14, respectively. Similar degrees of circulation restriction between epeiric seas and oceans in the geological past may have also led to overprinting of sedimentary carbonate δ44/40Ca values in nearshore regions of epeiric seas due to local-scale cycling of seawater through coastal carbonate aquifers. Local Ca-cycling effects may explain some of the scatter in δ44/40Ca values present in the Ca-isotope evolution curve of Phanerozoic oceans.

High Precision Seawater Sr/Ca Measurements in the Florida Keys by Inductively Coupled Plasma Atomic Emission Spectrometry: Analytical Method and Implications for Coral Paleothermometry

NASA Astrophysics Data System (ADS)

Khare, A.; Kilbourne, K. H.; Schijf, J.

2017-12-01

Standard methods of reconstructing past sea surface temperatures (SSTs) with coral skeletal Sr/Ca ratios assume the seawater Sr/Ca ratio is constant. However, there is little data to support this assumption, in part because analytical techniques capable of determining seawater Sr/Ca with sufficient accuracy and precision are expensive and time consuming. We demonstrate a method to measure seawater Sr/Ca using inductively coupled plasma atomic emission spectrometry where we employ an intensity ratio calibration routine that reduces the self- matrix effects of calcium and cancels out the matrix effects that are common to both calcium and strontium. A seawater standard solution cross-calibrated with multiple instruments is used to correct for long-term instrument drift and any remnant matrix effects. The resulting method produces accurate seawater Sr/Ca determinations rapidly, inexpensively, and with a precision better than 0.2%. This method will make it easier for coral paleoclimatologists to quantify potentially problematic fluctuations in seawater Sr/Ca at their study locations. We apply our method to test for variability in surface seawater Sr/Ca along the Florida Keys Reef Tract. We are collecting winter and summer samples for two years in a grid with eleven nearshore to offshore transects across the reef, as well as continuous samples collected by osmotic pumps at four locations adjacent to our grid. Our initial analysis of the grid samples indicates a trend of decreasing Sr/Ca values offshore potentially due to a decreasing groundwater influence. The values differ by as much as 0.05 mmol/mol which could lead to an error of 1°C in mean SST reconstructions. Future work involves continued sampling in the Florida Keys to test for seasonal and interannual variability in seawater Sr/Ca, as well as collecting data from small reefs in the Virgin Islands to test the stability of seawater Sr/Ca under different geologic, hydrologic and hydrographic environments.

Oculina Bank: Sidescan sonar and sediment data from a deep-water coral reef habitat off east-central Florida

USGS Publications Warehouse

Scanlon, Kathryn M.; Briere, Peter R.; Koenig, Christopher C.

1999-01-01

The Experimental Oculina Research Reserve (EORR) is located along the shelf edge off east-central Florida in water depths of about 60 to 100 meters. It is about 7.5 km wide and 43 km long and encompasses numerous high-relief rocky pinnacles where Oculina varicosa, a fragile deep-water coral, grows. These coral reefs have historically been the sites of prolific grouper spawning aggregations and have supported a large variety of other reef fish (Gilmore and Jones, 1992). Serious decline of the fishery in the area prompted the establishment of the EORR.The data presented in this open-file report were collected as part of a cooperative project between the U.S. Geological Survey (USGS) Coastal and Marine Geology Program and the National Marine Fisheries Service (NMFS) of the National Oceanographic and Atmospheric Administration (NOAA). The project’s goal was to provide reconnaissance geologic maps of the Experimental Oculina Research Reserve and an unprotected control area north of the reserve to support the NMFS studies of grouper spawning aggregations. To accomplish this, we collected sidescan sonar data and sediment samples throughout both study areas and used video and observations from a manned submersible at selected sites. This report includes digital mosaics of the sidescan sonar data, tabulated sediment data, and interpretative maps of the seafloor geology. The video and submersible observations are not included in this report, but were used in the interpretation of the sidescan data.

Recovery of the coral Montastrea annularis in the Florida Keys after the 1987 Caribbean ``bleaching event''

NASA Astrophysics Data System (ADS)

Fitt, William K.; Spero, Howard J.; Halas, John; White, Michael W.; Porter, James W.

1993-07-01

Many reef-building corals and other cnidarians lost photosynthetic pigments and symbiotic algae (zooxanthellae) during the coral bleaching event in the Caribbean in 1987. The Florida Reef Tract included some of the first documented cases, with widespread bleaching of the massive coral Montastrea annularis beginning in late August. Phototransects at Carysfort Reef showed discoloration of >90% of colonies of this species in March 1988 compared to 0% in July 1986; however no mortality was observed between 1986 and 1988. Samples of corals collected in February and June 1988 had zooxanthellae densities ranging from 0.1 in the most lightly colored corals, to 1.6x106 cells/cm2 in the darker corals. Minimum densities increased to 0.5x106 cells/cm2 by August 1989. Chlorophyll- a content of zooxanthellae and zooxanthellar mitotic indices were significantly higher in corals with lower densities of zooxanthellae, suggesting that zooxanthellar at low densities may be more nutrientsufficient than those in unbleached corals. Ash-free dry weight of coral tissue was positively correlated with zooxanthellae density at all sample times and was significantly lower in June 1988 compared to August 1989. Proteins and lipids per cm2 were significantly higher in August 1989 than in February or June, 1988. Although recovery of zooxanthellae density and coral pigmentation to normal levels may occur in less than one year, regrowth of tissue biomass and energy stores lost during the period of low symbiont densities may take significantly longer.

Book review of Littler DM. Littler MM (2000) Caribbean Reef Plants An Identification Guide to the Reef Plants of the Caribbean, Bahamas, Florida and Gulf of Mexico

NASA Astrophysics Data System (ADS)

Zuschin, M.; Hohenegger, J.; Steininger, F.

2001-09-01

Information on spatial variability and distribution patterns of organisms in coral reef environments is necessary to evaluate the increasing anthropogenic disturbance of marine environments (Richmond 1993; Wilkinson 1993; Dayton 1994). Therefore different types of subtidal, reef-associated hard substrata (reef flats, reef slopes, coral carpets, coral patches, rock grounds), each with different coral associations, were investigated to determine the distribution pattern of molluscs and their life habits (feeding strategies and substrate relations). The molluscs were strongly dominated by taxa with distinct relations to corals, and five assemblages were differentiated. The Dendropoma maxima assemblage on reef flats is a discrete entity, strongly dominated by this encrusting and suspension-feeding gastropod. All other assemblages are arranged along a substrate gradient of changing coral associations and potential molluscan habitats. The Coralliophila neritoidea- Barbatia foliata assemblage depends on the presence of Porites and shows a dominance of gastropods feeding on corals and of bivalves associated with living corals. The Chamoidea- Cerithium spp. assemblage on rock grounds is strongly dominated by encrusting bivalves. The Drupella cornus-Pteriidae assemblage occurs on Millepora- Acropora reef slopes and is strongly dominated by bivalves associated with living corals. The Barbatia setigera- Ctenoides annulata assemblage includes a broad variety of taxa, molluscan life habits and bottom types, but occurs mainly on faviid carpets and is transitional among the other three assemblages. A predicted degradation of coral coverage to rock bottoms due to increasing eutrophication and physical damage in the study area (Riegl and Piller 2000) will result in a loss of coral-associated molluscs in favor of bivalve crevice dwellers in dead coral heads and of encrusters on dead hard substrata.

Briefing to University of Porto on NASA Airborne Science Program and Ames UAVs

NASA Technical Reports Server (NTRS)

Fladeland, Matthew

2015-01-01

NASA Ames is exploring a partnership with the University of Portugal to jointly develop and test new autonomous vehicle technologies. As part of the discussions I will be briefing the University of Portugal faculty on the NASA Airborne Science Program (ASP) and associated activities at NASA Ames Research Center. The presentation will communicate the requirements that drive the program, the assets available to NASA researchers, and discuss research projects that have used unmanned aircraft systems including MIZOPEX, Surprise Valley, and Florida Keys Coral Reef assessment. Other topics will include the SIERRA and Dragon Eye UAV projects operated at Ames.

Upwellings mitigated Plio-Pleistocene heat stress for reef corals on the Florida platform (USA)

NASA Astrophysics Data System (ADS)

Brachert, T. C.; Reuter, M.; Krüger, S.; Kirkerowicz, J.; Klaus, J. S.

2015-10-01

The fast growing calcareous skeletons of zooxanthellate reef corals (z-corals) represent unique environmental proxy archives through their oxygen and carbon stable isotope composition (δ18O, δ13C). In addition, the accretion of the skeleton itself is ultimately linked to the environment and responds with variable growth rates (extension rate) and density to environmental changes. Here we present classical proxy data (δ18O, δ13C) in combination with calcification records from 15 massive z-corals. The z-corals were sampled from four interglacial units of the Florida carbonate platform (USA) dated approximately 3.2, 2.9, 1.8 and 1.2 Ma (middle Pliocene to early Pleistocene). The z-corals (Solenastrea, Orbicella, Porites) derive from unlithified shallow marine carbonates and were carefully screened for primary preservation suited for proxy analysis. We show that skeletal accretion was non-linear and responded with decreasing overall calcification rates (decreasing extension rate but increasing density) to warmer water temperatures. Under high annual water temperatures, inferred from subannually resolved δ18O data, skeletal bulk density was high, but extension rates and overall calcification rates were at a minimum (endmember scenario 1). Maximum skeletal density was reached during the summer season giving rise to a growth band of high density within the annually banded skeletons ("high density band", HDB). With low mean annual water temperatures (endmember scenario 2), bulk skeletal density was low but extension rates and calcification rates reached a maximum, and under these conditions the HDB formed during winter. Although surface water temperatures in the Western Atlantic warm pool during the interglacials of the late Neogene where ∼ 2 °C higher than they are in the present-day, intermittent upwelling of cool, nutrient rich water mitigated water temperatures off southwestern Florida in the middle of the Atlantic warm pool and created temporary refuges for z-coral growth. Based on the subannually resolved δ18O and δ13C records, the duration of the upwelling episodes causing the endmember 2 conditions was variable and lasted from a few years to a number of decades. The episodes of upwelling were interrupted by phases without upwelling (endmember 1) which lasted for at least a few years and led to high surface water temperatures. This variable environment is likely one of the reasons why the coral fauna is dominated by the eurytopic genus Solenastrea, also a species resistant to high turbidity. Over a period of ∼ 50 years, the oldest subannually resolved proxy record available (3.2 Ma) documents a persistent occurrence of the HDB during winter. In contrast, the HDB forms in summer in modern z-corals from the Florida reef tract. We suggest this difference to be the expression of a tendency towards decreasing upwelling since the middle Pliocene. The number of z-coral sclerochronological records for this time period is still, however, rather low and requires an improved resolution through data from additional time-slices. These data can contribute to predicting the effects of future ocean warming on z-coral health along the Florida reef tract.

A comparison between boat-based and diver-based methods for quantifying coral bleaching

USGS Publications Warehouse

Zawada, David G.; Ruzicka, Rob; Colella, Michael A.

2015-01-01

Recent increases in both the frequency and severity of coral bleaching events have spurred numerous surveys to quantify the immediate impacts and monitor the subsequent community response. Most of these efforts utilize conventional diver-based methods, which are inherently time-consuming, expensive, and limited in spatial scope unless they deploy large teams of scientifically-trained divers. In this study, we evaluated the effectiveness of the Along-Track Reef Imaging System (ATRIS), an automated image-acquisition technology, for assessing a moderate bleaching event that occurred in the summer of 2011 in the Florida Keys. More than 100,000 images were collected over 2.7 km of transects spanning four patch reefs in a 3-h period. In contrast, divers completed 18, 10-m long transects at nine patch reefs over a 5-day period. Corals were assigned to one of four categories: not bleached, pale, partially bleached, and bleached. The prevalence of bleaching estimated by ATRIS was comparable to the results obtained by divers, but only for corals > 41 cm in size. The coral size-threshold computed for ATRIS in this study was constrained by prevailing environmental conditions (turbidity and sea state) and, consequently, needs to be determined on a study-by-study basis. Both ATRIS and diver-based methods have innate strengths and weaknesses that must be weighed with respect to project goals.

3 CFR 8392 - Proclamation 8392 of June 12, 2009. National Oceans Month, 2009

Code of Federal Regulations, 2010 CFR

2010-01-01

... and affect our lives in a variety of ways. This month we celebrate the wonder of the oceans, and we... supporting life. From the abyssal plains of the Pacific to the shallow coral reefs and seagrass beds of the Florida Keys, oceans support an incredible diversity of marine life and ecosystems. The base of the...

Reef communities in the Dry Tortugas (Florida, USA): Baseline surveys for the new no-take area

USGS Publications Warehouse

2008-01-01

To understand the current community structure on reefs in the Dry Tortugas, we conducted specieslevel surveys of macroalgae, coral diversity, herbivorous and game fishes, urchins, and substratum composition (e.g., rugosity) in shallow (3- to 5-m depth) low-relief reef and hardbottom habitats in October 2007. We had particular interest in the ecological process of herbivory inside and outside of the “no-take” Research Natural Area (RNA) designated by the U.S. National Park Service in 2007, and establishing a baseline to assess future changes to trophic functioning. Diadema antillarum and herbivorous fish abundance, percent cover of macroalgae, and species richness of corals and gorgonians at the 18 randomly selected survey sites were not significantly different inside vs. outside of the RNA. Mean densities of D. antillarum ranged from 0.01 to 0.54 individuals m-2, with 11 of the 18 sites having densities above 0.10 individuals m-2. Both D. antillarum density and coral species richness were positively correlated to rugosity of the substratum. Diadema antillarum density was also positively related to percentage of the substratum composed of Acropora cervicornis rubble. Improved trophic functioning and increases in D. antillarum can improve reef condition in the Dry Tortugas, and the RNA is an important management tool to achieve increases in reef resilience to global-scale stressors.

Upwellings mitigated Plio-Pleistocene heat stress for reef corals on the Florida platform (USA)

NASA Astrophysics Data System (ADS)

Brachert, Thomas C.; Reuter, Markus; Krüger, Stefan; Kirkerowicz, Julia; Klaus, James S.

2016-03-01

The fast growing calcareous skeletons of zooxanthellate reef corals (z corals) represent unique environmental proxy archives through their oxygen and carbon stable isotope composition (δ18O, δ13C). In addition, the accretion of the skeleton itself is ultimately linked to the environment and responds with variable growth rates (extension rate) and density to environmental changes. Here we present classical proxy data (δ18O, δ13C) in combination with calcification records from 15 massive z corals. The z corals were sampled from four interglacial units of the Florida carbonate platform (USA) dated approximately 3.2, 2.9, 1.8 and 1.2 Ma (middle Pliocene to early Pleistocene). The z corals (Solenastrea, Orbicella, Porites) derive from unlithified shallow marine carbonates and were carefully screened for primary preservation suited for proxy analysis. We show that skeletal accretion responded with decreasing overall calcification rates (decreasing extension rate but increasing density) to warmer water temperatures. Under high annual water temperatures, inferred from sub-annually resolved δ18O data, skeletal bulk density was high, but extension rates and overall calcification rates were at a minimum (endmember scenario 1). Maximum skeletal density was reached during the summer season giving rise to a growth band of high density within the annually banded skeletons ("high density band", HDB). With low mean annual water temperatures (endmember scenario 2), bulk skeletal density was low but extension rates and calcification rates reached a maximum, and under these conditions the HDB formed during winter. Although surface water temperatures in the Western Atlantic warm pool during the interglacials of the late Neogene were ˜ 2 °C higher than they are in the present day, intermittent upwelling of cool, nutrient-rich water mitigated water temperatures off south-western Florida and created temporary refuges for z coral growth. Based on the sub-annually resolved δ18O and δ13C records, the duration of the upwelling episodes causing the endmember 2 conditions was variable and lasted from a few years to a number of decades. The episodes of upwelling were interrupted by phases without upwelling (endmember 1) which lasted for at least a few years and led to high surface water temperatures. This variable environment is likely one of the reasons why the coral fauna is dominated by the eurytopic genus Solenastrea, also a genus resistant to high turbidity. Over a period of ˜ 50 years, the oldest sub annually resolved proxy record available (3.2 Ma) documents a persistent occurrence of the HDB during winter. In contrast, the HDB forms in summer in modern z corals from the Florida reef tract. We suggest this difference should be tested as being the expression of a tendency towards decreasing interglacial upwelling since the middle Pliocene. The number of z coral sclerochronological records for the Plio-Pleistocene is still rather low, however, and requires more data and an improved resolution, through records from additional time slices. Nonetheless, our calcification data from the warm periods of past interglacials may contribute to predicting the effects of future ocean warming on z coral health along the Florida reef tract. The inconsistent timing of the HDB within single coral records or among specimens and time slices is unexpected and contrasts the common practice of establishing chronologies on the basis of the density banding.

Benthic Foraminifera as ecological indicators for water quality on the Great Barrier Reef

NASA Astrophysics Data System (ADS)

Uthicke, Sven; Nobes, Kristie

2008-07-01

Benthic foraminifera are established indicators for Water Quality (WQ) in Florida and the Caribbean. However, nearshore coral reefs of the Great Barrier Reef (GBR) and other Pacific regions are also subjected to increased nutrient and sediment loads. Here, we investigate the use of benthic foraminifera as indicators to assess status and trends of WQ on GBR reefs. We quantified several sediment parameters and the foraminiferan assemblage composition on 20 reefs in four geographic regions of the GBR, and along a water column nutrient and turbidity gradient. Twenty-seven easily recognisable benthic foraminiferan taxa (>63 μm) were distinguished. All four geographic regions differed significantly ( p < 0.05, ANOSIM) in their assemblage composition, and a redundancy analysis (RDA) showed that sediment parameters only explained a small proportion of the variance in the assemblage composition. On nine reefs along a previously studied water quality gradient, foraminifera showed a distinct shift in assemblage composition towards larger symbiont-bearing taxa from turbid inner shelf towards clearer outer shelf reefs. A RDA separated symbiotic and aposymbiotic (heterotrophic) taxa. In addition, total suspended solid and water column chlorophyll a concentrations were negatively correlated, and optical depth and distance to the mainland were positively correlated, with the abundance of symbiont-bearing taxa. Several large foraminifera were identified as indicators for offshore, clear water conditions. In contrast, heterotrophic rotaliids and a species retaining plastids ( Elphidium sp.) where highly characteristic for low light, higher nutrient conditions. Application of the FORAM index to GBR assemblage composition showed a significant increase in the value of this index with increased distance from the mainland in the Whitsunday region ( r2 = 0.75, p < 0.001), and therefore with increasing light and decreased nutrient availability. We conclude that it will be possible to apply this index to GBR and possibly other Pacific reefs after some adaptations and additional experimental work on species-specific limiting factors.

West Florida Shelf Response to Hurricane Irma

NASA Astrophysics Data System (ADS)

Liu, Y.; Weisberg, R. H.; Chen, J.; Merz, C. R.; Law, J.; Zheng, L.

2017-12-01

Hurricane Irma impacted the west Florida continental shelf (WFS) as it transited the state of Florida during September 10-12, 2017, making landfall first at Cudjoe Key and then again at Naples, as a Category 2 hurricane. The WFS response to Hurricane Irma is analyzed using a combination of in situ observations and numerical model simulations. The observations include water column velocity (by Acoustic Doppler Current Profilers), sea surface temperature and meteorological records from three moorings on the shelf, surface currents by high-frequency radars, and coastal tide gauge records. The West Florida Coastal Ocean Model (WFCOM) employed downscales from the deep Gulf of Mexico, across the shelf and into the estuaries by nesting the unstructured grid FVCOM in the Gulf of Mexico HYCOM. Both the observations and the model simulations revealed strong upwelling and vertical mixing followed by downwelling as the storm passed by. This was accompanied by a rapid drop in sea surface temperature of approximately 4ºC and large decreases in sea level with associated negative surges, causing drying in the Florida Bay, Charlotte Harbor, Tampa Bay estuaries and the Big Bend region. The transport and exchange of water between the shelf and the estuaries and between the shelf and the Florida Keys reef track during the hurricane may have important implications for ecosystem studies within the region.

Earth Observations taken by the Expedition 17 Crew

NASA Image and Video Library

2008-05-29

ISS017-E-008188 (29 May 2008) --- Dry Tortugas islands near Florida are featured in this image photographed by an Expedition 17 crewmember on the International Space Station. The Dry Tortugas are a group of islands located approximately 75 miles west of Key West, Florida; they form the western end of the Florida Keys in the Gulf of Mexico. Like the Keys, the Dry Tortugas are formed primarily of coral reefs over older limestone formations. The islands were named "Dry Tortugas" upon discovery by Ponce de Leon in 1513 -- "tortugas" means turtles in Spanish, and the islands are "dry" as no fresh water is found on them. From the air, the islands present an atoll-like arrangement, however no central volcanic structure is present. The islands are only accessible by boat or seaplane; nevertheless they have been designated the Dry Tortugas National Park, and are visited by hundreds every year. This view highlights three islands in the group; Bush Key, Hospital Key, and Garden Key -- the site of Fort Jefferson. Fort Jefferson is a Civil War era fort, perhaps most notable for being the prison of Dr. Samuel Mudd, who set the broken leg of John Wilkes Booth following Booth's assassination of President Lincoln. The fort itself is currently undergoing extensive restoration to prevent collapse of the hexagonal outer walls (center). The islands stand out due to brown and light tan carbonate sands visible above the Gulf of Mexico water surface. Light blue-green irregular masses in the image surrounding the islands are coral reef tops visible below the water surface.

Changing Salinity Patterns in Biscayne Bay, Florida

USGS Publications Warehouse

,

2004-01-01

Biscayne Bay, Fla., is a 428-square-mile (1,109-square-kilometer) subtropical estuarine ecosystem that includes Biscayne National Park, the largest marine park in the U.S. national park system (fig. 1). The bay began forming between 5,000 and 3,000 years ago as sea level rose and southern Florida was flooded. Throughout most of its history, the pristine waters of the bay supported abundant and diverse fauna and flora, and the bay was a nursery for the adjacent coral-reef and marine ecosystems. In the 20th century, urbanization of the Miami-Dade County area profoundly affected the environment of the bay. Construction of powerplants, water-treatment plants, and solid-waste sites and large-scale development along the shoreline stressed the ecosystem. Biscayne National Monument was established in 1968 to ?preserve and protect for the education, inspiration, recreation and enjoyment of present and future generations a rare combination of terrestrial, marine, and amphibious life in a tropical setting of great natural beauty? (Public Law 90?606). The monument was enlarged in 1980 and designated a national park.

Macroalgal Extracts Induce Bacterial Assemblage Shifts and Sublethal Tissue Stress in Caribbean Corals

PubMed Central

Morrow, Kathleen M.; Ritson-Williams, Raphael; Ross, Cliff; Liles, Mark R.; Paul, Valerie J.

2012-01-01

Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene amplicons was used to examine changes in the surface mucus layer (SML) bacteria in both coral species. Some of the extracts and live algae induced detectable shifts in coral-associated bacterial assemblages. However, one aqueous extract caused the bacterial assemblages to shift to an entirely new state (Lobophora variegata), whereas other organic extracts had little to no impact (e.g. Dictyota sp.). Macroalgal extracts more frequently induced sublethal stress responses in M. faveolata than in P. astreoides corals, suggesting that cellular integrity can be negatively impacted in selected corals when comparing co-occurring species. As modern reefs experience phase-shifts to a higher abundance of macroalgae with potent chemical defenses, these macroalgae are likely impacting the composition of microbial assemblages associated with corals and affecting overall reef health in unpredicted and unprecedented ways. PMID:23028648

Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals.

PubMed

Morrow, Kathleen M; Ritson-Williams, Raphael; Ross, Cliff; Liles, Mark R; Paul, Valerie J

2012-01-01

Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene amplicons was used to examine changes in the surface mucus layer (SML) bacteria in both coral species. Some of the extracts and live algae induced detectable shifts in coral-associated bacterial assemblages. However, one aqueous extract caused the bacterial assemblages to shift to an entirely new state (Lobophora variegata), whereas other organic extracts had little to no impact (e.g. Dictyota sp.). Macroalgal extracts more frequently induced sublethal stress responses in M. faveolata than in P. astreoides corals, suggesting that cellular integrity can be negatively impacted in selected corals when comparing co-occurring species. As modern reefs experience phase-shifts to a higher abundance of macroalgae with potent chemical defenses, these macroalgae are likely impacting the composition of microbial assemblages associated with corals and affecting overall reef health in unpredicted and unprecedented ways.

Phylogenetic and Chemical Diversity of Three Chemotypes of Bloom-Forming Lyngbya Species (Cyanobacteria: Oscillatoriales) from Reefs of Southeastern Florida▿

PubMed Central

Sharp, Koty; Arthur, Karen E.; Gu, Liangcai; Ross, Cliff; Harrison, Genelle; Gunasekera, Sarath P.; Meickle, Theresa; Matthew, Susan; Luesch, Hendrik; Thacker, Robert W.; Sherman, David H.; Paul, Valerie J.

2009-01-01

The cyanobacterial genus Lyngbya includes free-living, benthic, filamentous cyanobacteria that form periodic nuisance blooms in lagoons, reefs, and estuaries. Lyngbya spp. are prolific producers of biologically active compounds that deter grazers and help blooms persist in the marine environment. Here, our investigations reveal the presence of three distinct Lyngbya species on nearshore reefs in Broward County, FL, sampled in 2006 and 2007. With a combination of morphological measurements, molecular biology techniques, and natural products chemistry, we associated these three Lyngbya species with three distinct Lyngbya chemotypes. One species, identified as Lyngbya cf. confervoides via morphological measurements and 16S rRNA gene sequencing, produces a diverse array of bioactive peptides and depsipeptides. Our results indicate that the other two Lyngbya species produce either microcolins A and B or curacin D and dragonamides C and D. Results from screening for the biosynthetic capacity for curacin production among the three Lyngbya chemotypes in this study correlated that capacity with the presence of curacin D. Our work on these bloom-forming Lyngbya species emphasizes the significant phylogenetic and chemical diversity of the marine cyanobacteria on southern Florida reefs and identifies some of the genetic components of those differences. PMID:19270119

Fidelity of the Sr/Ca proxy in recording ocean temperature in the western Atlantic coral Siderastrea siderea

USGS Publications Warehouse

Kuffner, Ilsa B.; Roberts, Kelsey E.; Flannery, Jennifer A.; Morrison, Jennifer M.; Richey, Julie

2017-01-01

Massive corals provide a useful archive of environmental variability, but careful testing of geochemical proxies in corals is necessary to validate the relationship between each proxy and environmental parameter throughout the full range of conditions experienced by the recording organisms. Here we use samples from a coral-growth study to test the hypothesis that Sr/Ca in the coral Siderastrea siderea accurately records sea-surface temperature (SST) in the subtropics (Florida, USA) along 350 km of reef tract. We test calcification rate, measured via buoyant weight, and linear extension (LE) rate, estimated with Alizarin Red-S staining, as predictors of variance in the Sr/Ca records of 39 individual S. siderea corals grown at four outer-reef locations next to in-situ temperature loggers during two, year-long periods. We found that corals with calcification rates < 1.7 mg cm−2 d−1 or < 1.7 mm yr−1 LE returned spuriously high Sr/Ca values, leading to a cold-bias in Sr/Ca-based SST estimates. The threshold-type response curves suggest that extension rate can be used as a quality-control indicator during sample and drill-path selection when using long cores for SST paleoreconstruction. For our corals that passed this quality control step, the Sr/Ca-SST proxy performed well in estimating mean annual temperature across three sites spanning 350 km of the Florida reef tract. However, there was some evidence that extreme temperature stress in 2010 (cold snap) and 2011 (SST above coral-bleaching threshold) may have caused the corals not to record the temperature extremes. Known stress events could be avoided during modern calibrations of paleoproxies.

A Connection between Colony Biomass and Death in Caribbean Reef-Building Corals

PubMed Central

Thornhill, Daniel J.; Rotjan, Randi D.; Todd, Brian D.; Chilcoat, Geoff C.; Iglesias-Prieto, Roberto; Kemp, Dustin W.; LaJeunesse, Todd C.; Reynolds, Jennifer McCabe; Schmidt, Gregory W.; Shannon, Thomas; Warner, Mark E.; Fitt, William K.

2011-01-01

Increased sea-surface temperatures linked to warming climate threaten coral reef ecosystems globally. To better understand how corals and their endosymbiotic dinoflagellates (Symbiodinium spp.) respond to environmental change, tissue biomass and Symbiodinium density of seven coral species were measured on various reefs approximately every four months for up to thirteen years in the Upper Florida Keys, United States (1994–2007), eleven years in the Exuma Cays, Bahamas (1995–2006), and four years in Puerto Morelos, Mexico (2003–2007). For six out of seven coral species, tissue biomass correlated with Symbiodinium density. Within a particular coral species, tissue biomasses and Symbiodinium densities varied regionally according to the following trends: Mexico≥Florida Keys≥Bahamas. Average tissue biomasses and symbiont cell densities were generally higher in shallow habitats (1–4 m) compared to deeper-dwelling conspecifics (12–15 m). Most colonies that were sampled displayed seasonal fluctuations in biomass and endosymbiont density related to annual temperature variations. During the bleaching episodes of 1998 and 2005, five out of seven species that were exposed to unusually high temperatures exhibited significant decreases in symbiotic algae that, in certain cases, preceded further decreases in tissue biomass. Following bleaching, Montastraea spp. colonies with low relative biomass levels died, whereas colonies with higher biomass levels survived. Bleaching- or disease-associated mortality was also observed in Acropora cervicornis colonies; compared to A. palmata, all A. cervicornis colonies experienced low biomass values. Such patterns suggest that Montastraea spp. and possibly other coral species with relatively low biomass experience increased susceptibility to death following bleaching or other stressors than do conspecifics with higher tissue biomass levels. PMID:22216307

Testing the fidelity of the Sr/Ca proxy in recording ocean temperature in a western Atlantic coral

NASA Astrophysics Data System (ADS)

Kuffner, I. B.; Roberts, K.; Flannery, J. A.; Richey, J. N.; Morrison, J. M.

2017-12-01

Massive corals provide a useful archive of environmental variability, but careful testing of geochemical proxies in corals is necessary to validate the relationship between each proxy and environmental parameter throughout the full range of conditions experienced by the recording organisms. Here we use samples from a field-based coral-growth study to test the hypothesis that Sr/Ca in the coral Siderastrea siderea accurately records sea-surface temperature (SST) in the subtropics (Florida, USA) along 350 km of reef tract. We test calcification rate, measured via buoyant weight, and linear extension (LE) rate, estimated with Alizarin Red-S staining, as predictors of variance in the Sr/Ca records of 39 individual S. siderea corals grown at four outer-reef locations next to in-situ temperature loggers during two, year-long periods. We found that corals with calcification rates less than 1.7 mg cm-2 d-1 or LE rates less than 1.7 mm yr-1 returned spuriously high Sr/Ca values, leading to a cold bias in Sr/Ca-based SST estimates. The threshold-type response curves suggest that LE rate can be used as a quality-control indicator during sample and microdrill-path selection when using long cores for SST paleoreconstruction. For our corals that passed this quality control step, the Sr/Ca-SST proxy performed well in estimating mean annual SST across three sites spanning 350 km of the Florida reef tract. However, there was some evidence that extreme temperature stress in 2010 (cold snap) and 2011 (SST above coral-bleaching threshold) may have caused the corals not to record the temperature extremes. Known stress events could be avoided during modern calibrations of paleoproxies.

Aragonite saturation states and nutrient fluxes in coral reef sediments in Biscayne National Park, FL, USA

USGS Publications Warehouse

Lisle, John T.; Reich, Christopher D.; Halley, Robert B.

2014-01-01

Some coral reefs, such as patch reefs along the Florida Keys reef tract, are not showing significant reductions in calcification rates in response to ocean acidification. It has been hypothesized that this recalcitrance is due to local buffering effects from biogeochemical processes driven by seagrasses. We investigated the influence that pore water nutrients, dissolved inorganic carbon (DIC) and total alkalinity (TA) have on aragonite saturation states (Ωaragonite) in the sediments and waters overlying the sediment surfaces of sand halos and seagrass beds that encircle Alinas and Anniversary reefs in Biscayne National Park. Throughout the sampling period, sediment pore waters from both bottom types had lower oxidation/reduction potentials (ORP), with lower pH relative to the sediment surface waters. The majority (86.5%) of flux rates (n = 96) for ΣNOx–, PO43–, NH4+, SiO2, DIC and TA were positive, sometimes contributing significant concentrations of the respective constituents to the sediment surface waters. The Ωaragonite values in the pore waters (range: 0.18 to 4.78) were always lower than those in the overlying waters (2.40 to 4.46), and 52% (n = 48) of the values were aragonite in 75% (n = 16) of the samples, but increased it in the remainder. The elevated fluxes of nutrients, DIC and TA into the sediment–water interface layer negatively alters the suitability of this zone for the settlement and development of calcifying larvae, while enhancing the establishment of algal communities.

Development of A 2,000-10,000-Lb Improved Container Delivery System

DTIC Science & Technology

2010-04-01

System. The fourth airdrop system within the program is the Skirt Reefed G-12. The Skirt Reefed G-12 is intended to be a HV airdrop system...UNCLASSIFIED 5 D. Skirt Reefed G-12 System The Skirt Reefed G-12 System utilizes the G-12 parachute packed in accordance with Humanitarian Airdrop...Procedures2 with a slight variation in the reefing line material used. After several tests and many failures, the 9/16- inch tubular nylon and 2 turns of

EAARL submarine topography: Florida Keys National Marine Sanctuary

USGS Publications Warehouse

Brock, John C.; Wright, C. Wayne; Nayegandhi, Amar; Woolard, Jason; Patterson, Matt; Wilson, Iris; Travers, Laurinda J.

2007-01-01

This Web site contains 46 Lidar-derived submarine topography maps and GIS files for the Florida Keys National Marine Sanctuary. These Lidar-derived submarine topographic maps were produced as a collaborative effort between the U.S. Geological Survey (USGS) Coastal and Marine Geology Program, FISC St. Petersburg, Florida, the National Oceanic and Atmospheric Administration (NOAA), Remote Sensing Division, the National Park Service (NPS) South Florida/Caribbean Network Inventory and Monitoring Program, and the National Aeronautics and Space Administration (NASA) Wallops Flight Facility. One objective of this research is to create techniques to survey coral reefs and barrier islands for the purposes of geomorphic change studies, habitat mapping, ecological monitoring, change detection, and event assessment. As part of this project, data from an innovative instrument under development at the NASA Wallops Flight Facility, the NASA Experimental Airborne Advanced Research Lidar (EAARL) are being used. This sensor has the potential to make significant contributions in this realm for measuring subaerial and submarine topography within cross-environment surveys. High spectral resolution, water-column correction, and low costs were found to be key factors in providing accurate and affordable imagery to coastal resource managers.

Do no-take reserves benefit Florida's corals? 14 years of change and stasis in the Florida Keys National Marine Sanctuary

NASA Astrophysics Data System (ADS)

Toth, L. T.; van Woesik, R.; Murdoch, T. J. T.; Smith, S. R.; Ogden, J. C.; Precht, W. F.; Aronson, R. B.

2014-09-01

With coral populations in decline globally, it is critical that we tease apart the relative impacts of ecological and physical perturbations on reef ecosystems to determine the most appropriate management actions. This study compared the trajectories of benthic assemblages from 1998 to 2011 in three no-take reserves and three sites open to fishing, at 7-9 and 15-18 m depth in the Florida Keys. We evaluated temporal changes in the benthic assemblage to infer whether fisheries bans in no-take reserves could have cascading effects on the benthos in this region. Coral cover declined significantly over time at our sites and that trend was driven almost exclusively by decline of the Orbicella (formerly Montastraea) annularis species complex. Other coral taxa showed remarkable stasis and resistance to a variety of environmental perturbations. Protection status did not influence coral or macroalgal cover. The dynamics of corals and macroalgae in the 15 years since the reserves were established in 1997 suggest that although the reserves protected fish, they were of no perceptible benefit to Florida's corals.

Investigation of Coastal Hydrogeology Utilizing Geophysical and Geochemical Tools along the Broward County Coast, Florida

USGS Publications Warehouse

Reich, Christopher D.; Swarzenski, Peter W.; Greenwood, W. Jason; Wiese, Dana S.

2008-01-01

Geophysical (CHIRP, boomer, and continuous direct-current resistivity) and geochemical tracer studies (continuous and time-series 222Radon) were conducted along the Broward County coast from Port Everglades to Hillsboro Inlet, Florida. Simultaneous seismic, direct-current resistivity, and radon surveys in the coastal waters provided information to characterize the geologic framework and identify potential groundwater-discharge sites. Time-series radon at the Nova Southeastern University National Coral Reef Institute (NSU/NCRI) seawall indicated a very strong tidally modulated discharge of ground water with 222Rn activities ranging from 4 to 10 disintegrations per minute per liter depending on tidal stage. CHIRP seismic data provided very detailed bottom profiles (i.e., bathymetry); however, acoustic penetration was poor and resulted in no observed subsurface geologic structure. Boomer data, on the other hand, showed features that are indicative of karst, antecedent topography (buried reefs), and sand-filled troughs. Continuous resistivity profiling (CRP) data showed slight variability in the subsurface along the coast. Subtle changes in subsurface resistivity between nearshore (higher values) and offshore (lower values) profiles may indicate either a freshening of subsurface water nearshore or a change in sediment porosity or lithology. Further lithologic and hydrologic controls from sediment or rock cores or well data are needed to constrain the variability in CRP data.

Response of the Miliolid Archaias angulatus to simulated ocean acidification

USGS Publications Warehouse

Knorr, Paul O.; Robbins, Lisa L.; Harries, Peter J.; Hallock, Pamela; Wynn, Jonathan

2015-01-01

A common, but not universal, effect of ocean acidification on benthic foraminifera is a reduction in the growth rate. The miliolid Archaias angulatus is a high-Mg (>4 mole% MgCO3), symbiont-bearing, soritid benthic foraminifer that contributes to Caribbean reef carbonate sediments. A laboratory culture study assessed the effects of reduced pH on the growth of A. angulatus. We observed a statistically significant 50% reduction in the growth rate (p < 0.01), calculated from changes in maximum diameter, from 160 μm/28 days in the pH 8.0/pCO2air 480 ppm control group to 80 μm/28 days at a treatment level of pH 7.6/pCO2air 1328 ppm. Additionally, pseudopore area, δ18O values, and Mg/Ca ratio all increased, albeit slightly in the latter two variables. The reduction in growth rate indicates that under a high-CO2 setting, future A. angulatus populations will consist of smaller adults. A model using the results of this study estimates that at pH 7.6 A. angulatus carbonate production in the South Florida reef tract and Florida Bay decreases by 85%, from 0.27 Mt/yr to 0.04 Mt/yr, over an area of 9,000 km2.

Collection methods and descriptions of coral cores extracted from massive corals in Dry Tortugas National Park, Florida, U.S.A.

USGS Publications Warehouse

Weinzierl, Michael S.; Reich, Christopher D.; Hickey, T. Donald; Bartlett, Lucy A.; Kuffner, Ilsa B.

2016-11-29

Cores from living coral colonies were collected from Dry Tortugas National Park, Florida, U.S.A., to obtain skeletal records of past coral growth and allow geochemical reconstruction of environmental variables during the corals’ centuries-long lifespans. The samples were collected as part of the U.S. Geological Survey Coral Reef Ecosystems Studies project (http:/coastal.er.usgs.gov/crest) that provides science to assist resource managers tasked with the stewardship of coral reef resources. Three colonies each of the coral species Orbicella faveolata and Siderastrea siderea were collected in May 2012 using the methods described herein and as approved under National Park Service scientific collecting permit number DRTO-2012-SCI-0001 and are cataloged under accession number DRTO-353. These coral samples can be used to retroactively construct environmental parameters, including sea-surface temperature, by measuring the elemental composition of the coral skeleton. The cores described here, and others (see http://olga.er.usgs.gov/coreviewer/), can be requested, on loan, for scientific study. Photographic images for each coral in its ocean environment, the coral cores as curated and slabbed, and the X-rays of the slabs can be found in an associated U.S. Geological Survey Data Release.

Coupling between sulfur recycling and syndepositional carbonate dissolution: evidence from oxygen and sulfur isotope composition of pore water sulfate, South Florida Platform, U.S.A.

NASA Astrophysics Data System (ADS)

Ku, T. C. W.; Walter, L. M.; Coleman, M. L.; Blake, R. E.; Martini, A. M.

1999-10-01

Sulfur cycling in Fe-poor, organic-rich shelf carbonates, known to have rapid rates of SO4-2 reduction, remains poorly studied despite the volumetric significance of shelf deposits in modern and ancient carbon budgets. We investigated sulfur cycling in modern carbonates of the Florida Platform from end-member depositional environments (muddy sands from the Atlantic reef tract and finer-grained mudbank and island flank deposits from Florida Bay). Relations between pore water chemistry (SO4-2, ΣCO2, Ca-2/Cl-) and oxygen and sulfur stable isotope compositions of SO4-2 require direct coupling between sulfur redox cycling and syndepositional carbonate dissolution. Oxygen isotope compositions of pore water sulfate were remarkably shifted away from the established value for marine SO4-2 (+9.5‰), despite near normal SO4-2/Cl- ratios. Chemical evolution was least in reef tract pore waters and greatest in Florida Bay. Relative to overlying seawater, mudbank sediments exhibited sulfate depletion, with δ18OSO4 and δ34SSO4 values both increasing by about 7‰. More bioturbated island flank sediments, colonized by Thalassia grass, had a 5‰ increase in δ18OSO4, variable δ34SSO4 values (+17.7 to +23.3‰) and exceptionally high Ca+2/Cl- ratios. The large excess of Ca+2 (up to 1.7 mM) requires a much larger acid source than the amounts derived from utilization of dissolved O2 (∼0.3 mM) and small degrees of net SO4-2 reduction (<0.5 mM reduced). A conceptual model was constructed using chemical and isotopic data on natural pore waters and on sulfate isotope fractionation factors obtained from sediment incubation experiments. The model outputs show that pore water compositions can be explained by a redox cycle where microbial SO4-2 reduction is followed by very efficient H2S oxidation, thus maintaining virtually invariant SO4-2/Cl- ratios. The enhanced O2 transport may be driven by associated marine grass rhizome systems and microbial communities established in bioturbated sediments. The net result of the cycle is that the rate of sulfide oxidation, which is largely balanced by the rate of microbial sulfate reduction, is stoichiometrically related to the rate of carbonate dissolution. This is consistent with previously reported rates of carbonate dissolution (∼400 μmol/cm2-yr) and average rates of sulfate reduction (∼200 μmol/cm2-yr) from the Florida Platform and a 2:1 stoichiometry.

Sediments of the Dry Tortugas, south Florida, USA: Facies distribution on a ramp-like isolated carbonate platform

NASA Astrophysics Data System (ADS)

Gischler, Eberhard; Isaack, Anja; Hudson, J. Harold

2017-04-01

Four sedimentary facies may be delineated based on quantitative analysis of texture and composition of modern surface sediments on the Dry Tortugas carbonate platform. These include (1) mollusk-Halimeda wackestone, (2) mollusk packstone-to-grainstone, (3) coralgal-Halimeda grainstone, and (4) coralgal grainstone. Even though the Tortugas platform is characterized by an open circulation due to deep, broad marginal channels and a lack of a continuous surface-breaking marginal reef, facies are not distributed at random and show bathymetrical zonation. Also, facies appear to cover wide belts rather than forming a mosaic. Mollusk-Halimeda wackestone occurs in protected platform interior areas ca. 10-18 m deep. Mollusk packstone-to-grainstone occurs in more open platform interior settings adjacent to channels and in deeper outer reef areas of 14-25 m water depth. Coralgal-Halimeda grainstone is found on shallow marginal shoals (1-11 m deep), and coralgal grainstone on the somewhat deeper (3-16 m), seaward edges of these shoals. However, there is bathymetrical overlap of facies in intermediate depths of ca. 5-17 m. This limitation has implications for the interpretation of the fossil record, because changes in water depth are commonly thought to be reflected in facies changes, e.g., in sequence stratigraphy. Comparison with previous sediment studies of the 1930s, 1960s, and 1970s in the area exhibit a decrease in coral fragments and increases in coralline algal and mollusk shell fragments. These observations might be a result of environmental changes such as coral decline and die-outs during temperature events, disease, and the increase in macroalgae (due to the ecological extinction of the echinoid Diadema). The results suggest that more long-term studies are needed that further explore the influence of environmental change on reef sediment composition. Dry Tortugas surface sediments consist of lower portions of Halimeda plates and mollusk shell fragments and higher percentages of coralline algal fragments as compared to sediments of the adjacent Florida Reef Tract, possibly as a consequence of differences in platform morphology and exposure to waves and currents.

Untangling Trends and Drivers of Changing River Discharge Along Florida's Gulf Coast

NASA Astrophysics Data System (ADS)

Glodzik, K.; Kaplan, D. A.; Klarenberg, G.

2017-12-01

Along the relatively undeveloped Big Bend coastline of Florida, discharge in many rivers and springs is decreasing. The causes are unclear, though they likely include a combination of groundwater extraction for water supply, climate variability, and altered land use. Saltwater intrusion from altered freshwater influence and sea level rise is causing transformative ecosystem impacts along this flat coastline, including coastal forest die-off and oyster reef collapse. A key uncertainty for understanding river discharge change is predicting discharge from rainfall, since Florida's karstic bedrock stores large amounts of groundwater, which has a long residence time. This study uses Dynamic Factor Analysis (DFA), a multivariate data reduction technique for time series, to find common trends in flow and reveal hydrologic variables affecting flow in eight Big Bend rivers since 1965. The DFA uses annual river flows as response time series, and climate data (annual rainfall and evapotranspiration by watershed) and climatic indices (El Niño Southern Oscillation [ENSO] Index and North Atlantic Oscillation [NAO] Index) as candidate explanatory variables. Significant explanatory variables (one evapotranspiration and three rainfall time series) explained roughly 50% of discharge variation across rivers. Significant trends (representing unexplained variation) were shared among rivers, with geographical grouping of five northern rivers and three southern rivers, along with a strong downward trend affecting six out of eight systems. ENSO and NAO had no significant impact. Advancing knowledge of these dynamics is necessary for forecasting how altered rainfall and temperatures from climate change may impact flows. Improved forecasting is especially important given Florida's reliance on groundwater extraction to support its growing population.

Exploration of the West Florida Shelf Blue Holes Investigation of Physical and Biological Characteristics and Archaeological Implications of Unique Karst Features

NASA Astrophysics Data System (ADS)

Culter, J. K.

2006-12-01

The west Florida continental shelf is nearly as large as peninsular Florida and embraces a vast mosaic of marine habitats. The dominant shelf habitats have been described and studied to some degree. However, the offshore submerged sinkhole and spring features (blue holes) have not been scientifically described or studied, with the exception of one site called the Mudhole, a saltwater spring off Ft. Myers Beach. These features are relatively small habitats by standards of aerial coverage, but are probably more common than previously thought. These habitats are very unique shelf features, a reef in reverse, representing island habitats on the Florida shelf. This study was initiated in summer 2005 to describe the biota associated with the offshore blue hole features of this region and search for new sites. Eleven sites off the west central Florida coast have been verified and data has been collected at eight locations, all greater than 30 miles offshore. Most blue holes exhibit similar structural features, which divide the biota into zones. Pelagic species, such as amberjack, occupy the water column above the holes and reef species populate the rim. All of the sites investigated harbor one or more goliath grouper (Epinephelus itajara) and most of the features have resident nurse sharks (Ginglymostoma cirratum). Pelagic sharks periodically visit the sites and sea turtles are frequently observed at or near the holes. Whale sharks (Rhincodon typus) also seem to have an affinity for these features. The reef fauna that occupy the rim rapidly decline in abundance and diversity deeper into the holes with the deepest fauna being calcareous tube dwelling polychaetes that grow down to the edges of the hydrogen sulfide layer. There is pronounced temperature stratification within all holes. All of the sites investigated to date are relatively deep, by standards of recreational scuba diving, and divers utilized open circuit trimix to conduct the investigations. The key components of the documentation of the features included; vertical video transects, still photography, collections of biota, placement of recording thermographs and conductivity meters, collection of bottom sediment and rocks. During the course of the investigation a previously unknown cave feature over 45 meters in height and 76 meters in bottom diameter was discovered and dubbed Megadome. The cave is connected to the Gulf by a circular shaft approximately 0.75 meters in diameter and 11 meters in length. Instrumentation placed at Megadome revealed lunar tidal period water exchange, possible freshwater outflow and water movement in response to hurricanes. The upper portion of the cave contains a fouling community of sponges worms, tunicates and other organisms. A sink hole off the mouth of Tampa Bay was shown to contain a saltwater spring, venting at 72 m (235 fsw). Research is continuing. This research has been supported by a grant from NOAA, Ocean Exploration Program and Mote Marine Laboratory.

Biomimetric sentinel reef structures for optical sensing and communications

NASA Astrophysics Data System (ADS)

Fries, David; Hutcheson, Tim; Josef, Noam; Millie, David; Tate, Connor

2017-05-01

Traditional artificial reef structures are designed with uniform cellular architectures and topologies and do not mimic natural reef forms. Strings and ropes are a proven, common fisheries and mariculture construction element throughout the world and using them as artificial reef scaffolding can enable a diversity of ocean sensing, communications systems including the goal of sentinel reefs. The architecture and packaging of electronics is key to enabling such structures and systems. The distributed sensor reef concept leads toward a demonstrable science-engineering-informed framework for 3D smart habitat designs critical to stock fish development and coastal monitoring and protection. These `nature-inspired' reef infrastructures, can enable novel instrumented `reef observatories' capable of collecting real-time ecosystem data. Embedding lighting and electronic elements into artificial reef systems are the first systems conceptualized. This approach of bringing spatial light to the underwater world for optical sensing, communication and even a new breed of underwater robotic vehicle is an interdisciplinary research activity which integrates principles of electronic packaging, and ocean technology with art/design.

Coral reef connectivity within the Western Gulf of Mexico

NASA Astrophysics Data System (ADS)

Salas-Monreal, David; Marin-Hernandez, Mark; Salas-Perez, Jose de Jesus; Salas-de-Leon, David Alberto; Monreal-Gomez, Maria Adela; Perez-España, Horacio

2018-03-01

The yearlong monthly mean satellite data of the geostrophic velocities, the sea surface temperature and the chlorophyll-a values were used to elucidate any possible pathway among the different coral reef systems of the Western Gulf of Mexico (WGM). The geostrophic current velocities suggested different pathways connecting the coral reef areas. The typical coastal alongshore pathway constricted to the continental shelf, and two open ocean pathway, the first connecting the Campeche Reef System (CRS) with the Veracruz (VRS) and Tuxpan-Lobos Reef Systems (TLRS), and the second pathway connecting the Tuxpan-Lobos Reef System with the Flower Garden Reef System (FGRS). According to the pathways there should be more larvae transport from the southern Gulf of Mexico reef systems toward the FGRS than the other way. The connection from the southern Gulf of Mexico toward the FGRS took place during January, May, July, August and September (2015), while the connection from the FGRS toward the southern Gulf of Mexico reef system took place during January and February (2015), this was also suggested via model outputs. The density radio (R) was used as a first approximation to elucidate the influence of the freshwater continental discharges within the continental shelf. All coral reef areas were located where the Chlorophyll-a monthly mean values had values bellow 1 mg m- 2 with a density radio between 0 and 1, i.e. under the influence of continental discharges.

Marked annual coral bleaching resilience of an inshore patch reef in the Florida Keys: A nugget of hope, aberrance, or last man standing?

NASA Astrophysics Data System (ADS)

Gintert, Brooke E.; Manzello, Derek P.; Enochs, Ian C.; Kolodziej, Graham; Carlton, Renée; Gleason, Arthur C. R.; Gracias, Nuno

2018-06-01

Annual coral bleaching events, which are predicted to occur as early as the next decade in the Florida Keys, are expected to cause catastrophic coral mortality. Despite this, there is little field data on how Caribbean coral communities respond to annual thermal stress events. At Cheeca Rocks, an inshore patch reef near Islamorada, FL, the condition of 4234 coral colonies was followed over 2 yr of subsequent bleaching in 2014 and 2015, the two hottest summers on record for the Florida Keys. In 2014, this site experienced 7.7 degree heating weeks (DHW) and as a result 38.0% of corals bleached and an additional 36.6% were pale or partially bleached. In situ temperatures in summer of 2015 were even warmer, with the site experiencing 9.5 DHW. Despite the increased thermal stress in 2015, only 12.1% of corals were bleached in 2015, which was 3.1 times less than 2014. Partial mortality dropped from 17.6% of surveyed corals to 4.3% between 2014 and 2015, and total colony mortality declined from 3.4 to 1.9% between years. Total colony mortality was low over both years of coral bleaching with 94.7% of colonies surviving from 2014 to 2016. The reduction in bleaching severity and coral mortality associated with a second stronger thermal anomaly provides evidence that the response of Caribbean coral communities to annual bleaching is not strictly temperature dose dependent and that acclimatization responses may be possible even with short recovery periods. Whether the results from Cheeca Rocks represent an aberration or a true resilience potential is the subject of ongoing research.

Automated benthic counting of living and non-living components in Ngedarrak Reef, Palau via subsurface underwater video.

PubMed

Marcos, Ma Shiela Angeli; David, Laura; Peñaflor, Eileen; Ticzon, Victor; Soriano, Maricor

2008-10-01

We introduce an automated benthic counting system in application for rapid reef assessment that utilizes computer vision on subsurface underwater reef video. Video acquisition was executed by lowering a submersible bullet-type camera from a motor boat while moving across the reef area. A GPS and echo sounder were linked to the video recorder to record bathymetry and location points. Analysis of living and non-living components was implemented through image color and texture feature extraction from the reef video frames and classification via Linear Discriminant Analysis. Compared to common rapid reef assessment protocols, our system can perform fine scale data acquisition and processing in one day. Reef video was acquired in Ngedarrak Reef, Koror, Republic of Palau. Overall success performance ranges from 60% to 77% for depths of 1 to 3 m. The development of an automated rapid reef classification system is most promising for reef studies that need fast and frequent data acquisition of percent cover of living and nonliving components.

Analysis of multiple enteric viral targets as sewage markers in coral reefs

USGS Publications Warehouse

Lipp, Erin K.; Futch, J. Carrie; Griffin, Dale W.

2007-01-01

Water and coral mucus samples were collected from throughout the Florida Keys National Marine Sanctuary and the Dry Tortugas for three years and were analyzed for human enteric viruses (enteroviruses, noroviruses, hepatitis A virus and adenoviruses) as conservative markers of human sewage using molecular methods. Of the 100 coral and water samples collected, 40 contained genetic material from one or more human enteric viruses. DNA-based adenoviruses were detected widely, in 37.8% of samples and at 91% of stations, including ‘pristine’ reefs in the Dry Tortugas; however, the detection rate was ⩽12% for the RNA-based enteroviruses and noroviruses (hepatitis A virus was never detected). The disparity between the prevalence of RNA- and DNA-based viruses suggests the need for additional work to determine the utility of adenovirus as marker of human sewage.

Oyster reef restoration in the northern Gulf of Mexico: extent, methods and outcomes

USGS Publications Warehouse

LaPeyre, Megan K.; Furlong, Jessica N.; Brown, Laura A.; Piazza, Bryan P.; Brown, Ken

2014-01-01

Shellfish reef restoration to support ecological services has become more common in recent decades, driven by increasing awareness of the functional decline of shellfish systems. Maximizing restoration benefits and increasing efficiency of shellfish restoration activities would greatly benefit from understanding and measurement of system responses to management activities. This project (1) compiles a database of northern Gulf of Mexico inshore artificial oyster reefs created for restoration purposes, and (2) quantitatively assesses a subset of reefs to determine project outcomes. We documented 259 artificial inshore reefs created for ecological restoration. Information on reef material, reef design and monitoring was located for 94, 43 and 20% of the reefs identified. To quantify restoration success, we used diver surveys to quantitatively sample oyster density and substrate volume of 11 created reefs across the coast (7 with rock; 4 with shell), paired with 7 historic reefs. Reefs were defined as fully successful if there were live oysters, and partially successful if there was hard substrate. Of these created reefs, 73% were fully successful, while 82% were partially successful. These data highlight that critical information related to reef design, cost, and success remain difficult to find and are generally inaccessible or lost, ultimately hindering efforts to maximize restoration success rates. Maintenance of reef creation information data, development of standard reef performance measures, and inclusion of material and reef design testing within reef creation projects would be highly beneficial in implementing adaptive management. Adaptive management protocols seek specifically to maximize short and long-term restoration success, but are critically dependent on tracking and measuring system responses to management activities.

Great Barrier Reef, Queensland, Australia

NASA Technical Reports Server (NTRS)

1990-01-01

This detailed view of the Great Barrier Reef, Queensland, Australia (19.5S, 149.5E) shows several small patch reefs within the overall reef system. The Great Barrier Reef, largest in the world, comprises thousands of individual reefs of great variety and are closely monitored by marine ecologists. These reefs are about 6000 years old and sit on top of much older reefs. The most rapid coral growth occurs on the landward side of the reefs.

Florida Keys

NASA Image and Video Library

2002-12-13

The Florida Keys are a chain of islands, islets and reefs extending from Virginia Key to the Dry Tortugas for about 309 kilometers (192 miles). The keys are chiefly limestone and coral formations. The larger islands of the group are Key West (with its airport), Key Largo, Sugarloaf Key, and Boca Chica Key. A causeway extends from the mainland to Key West. This image was acquired on October 28, 2001, by the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) on NASA's Terra satellite. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet. http://photojournal.jpl.nasa.gov/catalog/PIA03890

Experimental Bleaching of a Reef-Building Coral Using a Simplified Recirculating Laboratory Exposure System

EPA Science Inventory

Determining stressor-response relationships in reef building corals is a critical need for researchers because of global declines in coral reef ecosystems. A simplified recirculating coral exposure system for laboratory testing of a diversity of species and morphologies of reef b...

Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (South Florida). Reef-Building Corals.

DTIC Science & Technology

1987-08-01

questions regarding this report should be directed to one of the following addresses. Information Transfer Specialist National Coastal Ecosystems Team U.S...to this storm.) At (Anonymous 1982). 30 m there was no damage to A. cervicornis, M. annularis, or M. Poaching is almost impossible to cavernosa...urchins, whose may actually increase poaching on populations were little affected by local coral populations. the storm. Although Ross (1984) proposed a

Ghost reefs: Nautical charts document large spatial scale of coral reef loss over 240 years

PubMed Central

McClenachan, Loren; O’Connor, Grace; Neal, Benjamin P.; Pandolfi, John M.; Jackson, Jeremy B. C.

2017-01-01

Massive declines in population abundances of marine animals have been documented over century-long time scales. However, analogous loss of spatial extent of habitat-forming organisms is less well known because georeferenced data are rare over long time scales, particularly in subtidal, tropical marine regions. We use high-resolution historical nautical charts to quantify changes to benthic structure over 240 years in the Florida Keys, finding an overall loss of 52% (SE, 6.4%) of the area of the seafloor occupied by corals. We find a strong spatial dimension to this decline; the spatial extent of coral in Florida Bay and nearshore declined by 87.5% (SE, 7.2%) and 68.8% (SE, 7.5%), respectively, whereas that of offshore areas of coral remained largely intact. These estimates add to finer-scale loss in live coral cover exceeding 90% in some locations in recent decades. The near-complete elimination of the spatial coverage of nearshore coral represents an underappreciated spatial component of the shifting baseline syndrome, with important lessons for other species and ecosystems. That is, modern surveys are typically designed to assess change only within the species’ known, extant range. For species ranging from corals to sea turtles, this approach may overlook spatial loss over longer time frames, resulting in both overly optimistic views of their current conservation status and underestimates of their restoration potential. PMID:28913420

Genomic patterns in Acropora cervicornis show extensive population structure and variable genetic diversity.

PubMed

Drury, Crawford; Schopmeyer, Stephanie; Goergen, Elizabeth; Bartels, Erich; Nedimyer, Ken; Johnson, Meaghan; Maxwell, Kerry; Galvan, Victor; Manfrino, Carrie; Lirman, Diego

2017-08-01

Threatened Caribbean coral communities can benefit from high-resolution genetic data used to inform management and conservation action. We use Genotyping by Sequencing (GBS) to investigate genetic patterns in the threatened coral, Acropora cervicornis , across the Florida Reef Tract (FRT) and the western Caribbean. Results show extensive population structure at regional scales and resolve previously unknown structure within the FRT. Different regions also exhibit up to threefold differences in genetic diversity (He), suggesting targeted management based on the goals and resources of each population is needed. Patterns of genetic diversity have a strong spatial component, and our results show Broward and the Lower Keys are among the most diverse populations in Florida. The genetic diversity of Caribbean staghorn coral is concentrated within populations and within individual reefs (AMOVA), highlighting the complex mosaic of population structure. This variance structure is similar over regional and local scales, which suggests that in situ nurseries are adequately capturing natural patterns of diversity, representing a resource that can replicate the average diversity of wild assemblages, serving to increase intraspecific diversity and potentially leading to improved biodiversity and ecosystem function. Results presented here can be translated into specific goals for the recovery of A. cervicornis , including active focus on low diversity areas, protection of high diversity and connectivity, and practical thresholds for responsible restoration.

Genetic Diversity and Connectivity in the Threatened Staghorn Coral (Acropora cervicornis) in Florida

PubMed Central

Hemond, Elizabeth M.; Vollmer, Steven V.

2010-01-01

Over the past three decades, populations of the dominant shallow water Caribbean corals, Acropora cervicornis and A. palmata, have been devastated by white-band disease (WBD), resulting in the listing of both species as threatened under the U.S. Endangered Species Act. A key to conserving these threatened corals is understanding how their populations are genetically interconnected throughout the greater Caribbean. Genetic research has demonstrated that gene flow is regionally restricted across the Caribbean in both species. Yet, despite being an important site of coral reef research, little genetic data has been available for the Florida Acropora, especially for the staghorn coral, A. cervicornis. In this study, we present new mitochondrial DNA sequence data from 52 A. cervicornis individuals from 22 sites spread across the upper and lower Florida Keys, which suggest that Florida's A. cervicornis populations are highly genetically interconnected (FST = −0.081). Comparison between Florida and existing mtDNA data from six regional Caribbean populations indicates that Florida possesses high levels of standing genetic diversity (h = 0.824) relative to the rest of the greater Caribbean (h = 0.701±0.043). We find that the contemporary level of gene flow across the greater Caribbean, including Florida, is restricted ( = 0.117), but evidence from shared haplotypes suggests the Western Caribbean has historically been a source of genetic variation for Florida. Despite the current patchiness of A. cervicornis in Florida, the relatively high genetic diversity and connectivity within Florida suggest that this population may have sufficient genetic variation to be viable and resilient to environmental perturbation and disease. Limited genetic exchange across regional populations of the greater Caribbean, including Florida, indicates that conservation efforts for A. cervicornis should focus on maintaining and managing populations locally rather than relying on larval inputs from elsewhere. PMID:20111583

Physical and Biological Controls on the Carbonate Chemistry of Coral Reef Waters: Effects of Metabolism, Wave Forcing, Sea Level, and Geomorphology

PubMed Central

Falter, James L.; Lowe, Ryan J.; Zhang, Zhenlin; McCulloch, Malcolm

2013-01-01

We present a three-dimensional hydrodynamic-biogeochemical model of a wave-driven coral-reef lagoon system using the circulation model ROMS (Regional Ocean Modeling System) coupled with the wave transformation model SWAN (Simulating WAves Nearshore). Simulations were used to explore the sensitivity of water column carbonate chemistry across the reef system to variations in benthic reef metabolism, wave forcing, sea level, and system geomorphology. Our results show that changes in reef-water carbonate chemistry depend primarily on the ratio of benthic metabolism to the square root of the onshore wave energy flux as well as on the length and depth of the reef flat; however, they are only weakly dependent on channel geometry and the total frictional resistance of the reef system. Diurnal variations in pCO2, pH, and aragonite saturation state (Ωar) are primarily dependent on changes in net production and are relatively insensitive to changes in net calcification; however, net changes in pCO2, pH, and Ωar are more strongly influenced by net calcification when averaged over 24 hours. We also demonstrate that a relatively simple one-dimensional analytical model can provide a good description of the functional dependence of reef-water carbonate chemistry on benthic metabolism, wave forcing, sea level, reef flat morphology, and total system frictional resistance. Importantly, our results indicate that any long-term (weeks to months) net offsets in reef-water pCO2 relative to offshore values should be modest for reef systems with narrow and/or deep lagoons. Thus, the long-term evolution of water column pCO2 in many reef environments remains intimately connected to the regional-scale oceanography of offshore waters and hence directly influenced by rapid anthropogenically driven increases in pCO2. PMID:23326411

Physical and biological controls on the carbonate chemistry of coral reef waters: effects of metabolism, wave forcing, sea level, and geomorphology.

PubMed

Falter, James L; Lowe, Ryan J; Zhang, Zhenlin; McCulloch, Malcolm

2013-01-01

We present a three-dimensional hydrodynamic-biogeochemical model of a wave-driven coral-reef lagoon system using the circulation model ROMS (Regional Ocean Modeling System) coupled with the wave transformation model SWAN (Simulating WAves Nearshore). Simulations were used to explore the sensitivity of water column carbonate chemistry across the reef system to variations in benthic reef metabolism, wave forcing, sea level, and system geomorphology. Our results show that changes in reef-water carbonate chemistry depend primarily on the ratio of benthic metabolism to the square root of the onshore wave energy flux as well as on the length and depth of the reef flat; however, they are only weakly dependent on channel geometry and the total frictional resistance of the reef system. Diurnal variations in pCO(2), pH, and aragonite saturation state (Ω(ar)) are primarily dependent on changes in net production and are relatively insensitive to changes in net calcification; however, net changes in pCO(2), pH, and Ω(ar) are more strongly influenced by net calcification when averaged over 24 hours. We also demonstrate that a relatively simple one-dimensional analytical model can provide a good description of the functional dependence of reef-water carbonate chemistry on benthic metabolism, wave forcing, sea level, reef flat morphology, and total system frictional resistance. Importantly, our results indicate that any long-term (weeks to months) net offsets in reef-water pCO(2) relative to offshore values should be modest for reef systems with narrow and/or deep lagoons. Thus, the long-term evolution of water column pCO(2) in many reef environments remains intimately connected to the regional-scale oceanography of offshore waters and hence directly influenced by rapid anthropogenically driven increases in pCO(2).

Connectivity and systemic resilience of the Great Barrier Reef.

PubMed

Hock, Karlo; Wolff, Nicholas H; Ortiz, Juan C; Condie, Scott A; Anthony, Kenneth R N; Blackwell, Paul G; Mumby, Peter J

2017-11-01

Australia's iconic Great Barrier Reef (GBR) continues to suffer from repeated impacts of cyclones, coral bleaching, and outbreaks of the coral-eating crown-of-thorns starfish (COTS), losing much of its coral cover in the process. This raises the question of the ecosystem's systemic resilience and its ability to rebound after large-scale population loss. Here, we reveal that around 100 reefs of the GBR, or around 3%, have the ideal properties to facilitate recovery of disturbed areas, thereby imparting a level of systemic resilience and aiding its continued recovery. These reefs (1) are highly connected by ocean currents to the wider reef network, (2) have a relatively low risk of exposure to disturbances so that they are likely to provide replenishment when other reefs are depleted, and (3) have an ability to promote recovery of desirable species but are unlikely to either experience or spread COTS outbreaks. The great replenishment potential of these 'robust source reefs', which may supply 47% of the ecosystem in a single dispersal event, emerges from the interaction between oceanographic conditions and geographic location, a process that is likely to be repeated in other reef systems. Such natural resilience of reef systems will become increasingly important as the frequency of disturbances accelerates under climate change.

The role of the reef-dune system in coastal protection in Puerto Morelos (Mexico)

NASA Astrophysics Data System (ADS)

Franklin, Gemma L.; Torres-Freyermuth, Alec; Medellin, Gabriela; Allende-Arandia, María Eugenia; Appendini, Christian M.

2018-04-01

Reefs and sand dunes are critical morphological features providing natural coastal protection. Reefs dissipate around 90 % of the incident wave energy through wave breaking, whereas sand dunes provide the final natural barrier against coastal flooding. The storm impact on coastal areas with these features depends on the relative elevation of the extreme water levels with respect to the sand dune morphology. However, despite the importance of barrier reefs and dunes in coastal protection, poor management practices have degraded these ecosystems, increasing their vulnerability to coastal flooding. The present study aims to theoretically investigate the role of the reef-dune system in coastal protection under current climatic conditions at Puerto Morelos, located in the Mexican Caribbean Sea, using a widely validated nonlinear non-hydrostatic numerical model (SWASH). Wave hindcast information, tidal level, and a measured beach profile of the reef-dune system in Puerto Morelos are employed to estimate extreme runup and the storm impact scale for current and theoretical scenarios. The numerical results show the importance of including the storm surge when predicting extreme water levels and also show that ecosystem degradation has important implications for coastal protection against storms with return periods of less than 10 years. The latter highlights the importance of conservation of the system as a mitigation measure to decrease coastal vulnerability and infrastructure losses in coastal areas in the short to medium term. Furthermore, the results are used to evaluate the applicability of runup parameterisations for beaches to reef environments. Numerical analysis of runup dynamics suggests that runup parameterisations for reef environments can be improved by including the fore reef slope. Therefore, future research to develop runup parameterisations incorporating reef geometry features (e.g. reef crest elevation, reef lagoon width, fore reef slope) is warranted.

Simulated NASA Satellite Data Products for the NOAA Integrated Coral Reef Observation Network/Coral Reef Early Warning System

NASA Technical Reports Server (NTRS)

Estep, Leland; Spruce, Joseph P.

2007-01-01

This RPC (Rapid Prototyping Capability) experiment will demonstrate the use of VIIRS (Visible/Infrared Imager/Radiometer Suite) and LDCM (Landsat Data Continuity Mission) sensor data as significant input to the NOAA (National Oceanic and Atmospheric Administration) ICON/ CREWS (Integrated Coral Reef Observation System/Coral Reef Early Warning System). The project affects the Coastal Management Program Element of the Applied Sciences Program.

Characteristics of Settling Coral Reef Fish Are Related to Recruitment Timing and Success

PubMed Central

Rankin, Tauna L.; Sponaugle, Su

2014-01-01

Many marine populations exhibit high variability in the recruitment of young into the population. While environmental cycles and oceanography explain some patterns of replenishment, the role of other growth-related processes in influencing settlement and recruitment is less clear. Examination of a 65-mo. time series of recruitment of a common coral reef fish, Stegastes partitus, to the reefs of the upper Florida Keys revealed that during peak recruitment months, settlement stage larvae arriving during dark lunar phases grew faster as larvae and were larger at settlement compared to those settling during the light lunar phases. However, the strength and direction of early trait-mediated selective mortality also varied by settlement lunar phase such that the early life history traits of 2–4 week old recruit survivors that settled across the lunar cycle converged to more similar values. Similarly, within peak settlement periods, early life history traits of settling larvae and selective mortality of recruits varied by the magnitude of the settlement event: larvae settling in larger events had longer PLDs and consequently were larger at settlement than those settling in smaller pulses. Traits also varied by recruitment habitat: recruits surviving in live coral habitat (vs rubble) or areas with higher densities of adult conspecifics were those that were larger at settlement. Reef habitats, especially those with high densities of territorial conspecifics, are more challenging habitats for young fish to occupy and small settlers (due to lower larval growth and/or shorter PLDs) to these habitats have a lower chance of survival than they do in rubble habitats. Settling reef fish are not all equal and the time and location of settlement influences the likelihood that individuals will survive to contribute to the population. PMID:25250964

Corals from Space

NASA Technical Reports Server (NTRS)

Patzert, William C.

1999-01-01

The goal of this research is to monitor the health and vigor of coral reef ecosystems, and their sensitivity to natural and anthropogenic climate changes. To achieve these lofty goals, this research is investigating the feasibility of using spaceborne high-resolution spectrometers (on the US Landsat, French Systeme Probatoire pour l'Observation de la Terre [SPOT] and/or the Indian Resources Satellite [IRS 1C & 1D] spacecraft) to first map the aerial extent of coral reef systems, and second separate the amount of particular corals. If this is successful, we could potentially provide a quantum leap in our understanding of coral reef systems, as well as provide much needed baseline data to measure future changes in global coral reef ecosystems. In collaboration with Tomas Tomascik, Yann Morel, and other colleagues, a series of experiments were planned to coordinate in situ coral observations, high-resolution spaceborne imagery (from Landsat, SPOT, and, possibly, IRS IC spacecraft), and NASA Space Shuttle photographs and digital images. Our eventual goal is to develop "coral health algorithms" that can be used to assess time series of imagery collected from satellite sensors (Landsat since 1972, SPOT since 1986) in concert with in situ observations. The bad news from last year was that from 1997 to mid- 1998, the extreme cloudiness over southeast Asia due to prolonged smoke from El Nino-related fires and the economic chaos in this region frustrated both our space and reef-based data collection activities. When this volatile situation stabilizes, we will restart these activities. The good news was that in collaboration with Al Strong at the National Oceanic and Atmospheric Administration (NOAA) we had an exciting year operationally using the NOAA's Advanced Very High Resolution Radiometer sensor derived sea surface temperature products to warn of coral "bleaching" at many locations throughout the tropics. Data from NOAA's satellites showed that during the El Nino of 1997 and the first half of 1998, more ocean area in the tropics experienced exceptionally high sea surface temperatures, or "hot spots," than have been observed in any fall year since the El Nino of 1982. From January to July, the coral bleaching events were concentrated in the Southern Hemisphere (during its warm season). Since July 1998, the reports of extensive coral bleaching have again spread into regions of the Northern Hemisphere following abnormally high sea surface temperatures, especially around the Philippines and throughout the Caribbean Basin, Bahamas, Bermuda and Florida Keys. These El Nino induced events clearly demonstrated that corals are the "canaries of the marine ecosystem," highly sensitive to short-term natural climate events (El Nino), and should be monitored as measures of longer-term environmental and climate change. Additional information is contained in the original.

Acropora corals in Florida: status, trends, conservation, and prospects for recovery

USGS Publications Warehouse

Miller, Margaret W.; Jaap, Walt C.; Chiappone, Mark; Vargas-Angel, Bernardo; Keller, Brian; Aronson, Richard B.; Shinn, Eugene A.; Bruckner, Andrew W.

2003-01-01

Despite representing the northern extent of Acropora spp. in the Caribbean, most of the Florida reef line from Palm Beach through the Keys was built by these species. Climatic factors appear to have bee important agents of Acropora loss within historic (century) time frames. In the recent past (1980-present), available quantitative evidence suggests dramatic declines occurred in A. cervicornis first (late 70's to 84) with collapse of A. palmata occuring later (1981-86). However, recent monitoring studies (1996-2001) show continued decline of remnant populations of A. palmata. Current trends in A. cervicornis in the Florida Keys are hard to assess given its exceedingly low abundance, except in Broward County, FL where recently discovered A. cervicornis thickets are thriving. While the State of Florida recognizes A. palmata and A. cervicornis as endangered species (Deyrup and Franz 1994), this designation carries no management implications. The current management plan of the FKNMS provides many strategies for coral conservation, among them minimizing the threat of vessel groundings and anchor damage, and prohibitions on collection, touching, and damage from fishery and recreational users. Although Acropopra spp. are not explicitly given any special consideration, they are implicitly by Santuary management. Restoration approaches undertaken in the Florida Keys include rescue of fragments damaged by groudings and experimental work to culture broadcast-spawned larvae to re-seed natural substrates. Neither of these efforts have yet realized full success.

Along-Track Reef Imaging System (ATRIS)

USGS Publications Warehouse

Brock, John; Zawada, Dave

2006-01-01

"Along-Track Reef Imaging System (ATRIS)" describes the U.S. Geological Survey's Along-Track Reef Imaging System, a boat-based sensor package for rapidly mapping shallow water benthic environments. ATRIS acquires high resolution, color digital images that are accurately geo-located in real-time.

Species Profiles. Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (South Florida). Reef-Building Tube Worm.

DTIC Science & Technology

1989-12-01

horseshoe crabs (Limulus polyphemus), coquina 32 °C over a 2-year period. However, these extremes are rock, sea walls, piers, jetties, peat, and beach...and between the rows of feeding REASON FOR INCLUSION IN SERIES tentacles. The lower lip of the mouth is surrounded by the horseshoe -shaped building...branchiae ( gills ), and range for hundreds of kilometers of coastline (Kirtley a ventral muscular plate. About 32 segments make up and Tanner 1968). The

Apalachicola Bay interpreted seismic horizons and updated IRIS chirp seismic-reflection data

USGS Publications Warehouse

Cross, V.A.; Twichell, D.C.; Foster, D.S.; O'Brien, T.F.

2012-01-01

Apalachicola Bay and St. George Sound contain the largest oyster fishery in Florida, and the growth and distribution of the numerous oyster reefs here are the combined product of modern estuarine conditions and the late Holocene evolution of the bay. A suite of geophysical data and cores were collected during a cooperative study by the U.S. Geological Survey, the National Oceanic and Atmospheric Administration Coastal Services Center, and the Apalachicola National Estuarine Research Reserve to refine the geology of the bay floor as well as the bay's Holocene stratigraphy. Sidescan-sonar imagery, bathymetry, high-resolution seismic profiles, and cores show that oyster reefs occupy the crests of sandy shoals that range from 1 to 7 kilometers in length, while most of the remainder of the bay floor is covered by mud. The sandy shoals are the surficial expression of broader sand deposits associated with deltas that advanced southward into the bay between 6,400 and 4,400 years before present. The seismic and core data indicate that the extent of oyster reefs was greatest between 2,400 and 1,200 years before present and has decreased since then due to the continued input of mud to the bay by the Apalachicola River. The association of oyster reefs with the middle to late Holocene sandy delta deposits indicates that the present distribution of oyster beds is controlled in part by the geologic evolution of the estuary.

Evidence from aerial photography of structural loss of coral reefs at Barbados, West Indies

NASA Astrophysics Data System (ADS)

Lewis, J.

2002-04-01

In response to concerns about widespread degradation of coral reefs at Barbados, West Indies, over the past two decades, maps and planimetric areas of 20 fringing coral reefs were estimated from enlargements of aerial photographs of the island, using geographic information system analysis. There were statistically significant reductions in reef areas over a 40-year period from 1950 to 1991. Areal losses exceeding measurement and boundary interpretation errors of 10% were detected on eight of the 20 reefs. Ground validation carried out by divers on six of the reefs confirmed physical losses of reef structures and accumulation of rubble and sand substrata at sites where substantial planimetric area loss was detected on aerial photographs. Structural losses occurred along the "spur and groove" system of the reef-seaward edge, within deep channels or breaches in the reef front, and along the flanks or ends of reefs. The location and nature of the observed losses suggest that storm damage and seasonal alterations in beach morphology are the two most important factors contributing to geomorphological structural loss of the reefs.

ReefLink Database: A decision support tool for Linking Coral Reefs and Society Through Systems Thinking

EPA Science Inventory

Coral reefs provide the ecological foundation for productive and diverse fish and invertebrate communities that support multibillion dollar reef fishing and tourism industries. Yet reefs are threatened by growing coastal development, climate change, and over-exploitation. A key i...

Virus-host interactions and their roles in coral reef health and disease.

PubMed

Thurber, Rebecca Vega; Payet, Jérôme P; Thurber, Andrew R; Correa, Adrienne M S

2017-04-01

Coral reefs occur in nutrient-poor shallow waters, constitute biodiversity and productivity hotspots, and are threatened by anthropogenic disturbance. This Review provides an introduction to coral reef virology and emphasizes the links between viruses, coral mortality and reef ecosystem decline. We describe the distinctive benthic-associated and water-column- associated viromes that are unique to coral reefs, which have received less attention than viruses in open-ocean systems. We hypothesize that viruses of bacteria and eukaryotes dynamically interact with their hosts in the water column and with scleractinian (stony) corals to influence microbial community dynamics, coral bleaching and disease, and reef biogeochemical cycling. Last, we outline how marine viruses are an integral part of the reef system and suggest that the influence of viruses on reef function is an essential component of these globally important environments.

Connectivity and systemic resilience of the Great Barrier Reef

PubMed Central

Wolff, Nicholas H.; Ortiz, Juan C.; Condie, Scott A.; Anthony, Kenneth R. N.; Blackwell, Paul G.; Mumby, Peter J.

2017-01-01

Australia’s iconic Great Barrier Reef (GBR) continues to suffer from repeated impacts of cyclones, coral bleaching, and outbreaks of the coral-eating crown-of-thorns starfish (COTS), losing much of its coral cover in the process. This raises the question of the ecosystem’s systemic resilience and its ability to rebound after large-scale population loss. Here, we reveal that around 100 reefs of the GBR, or around 3%, have the ideal properties to facilitate recovery of disturbed areas, thereby imparting a level of systemic resilience and aiding its continued recovery. These reefs (1) are highly connected by ocean currents to the wider reef network, (2) have a relatively low risk of exposure to disturbances so that they are likely to provide replenishment when other reefs are depleted, and (3) have an ability to promote recovery of desirable species but are unlikely to either experience or spread COTS outbreaks. The great replenishment potential of these ‘robust source reefs’, which may supply 47% of the ecosystem in a single dispersal event, emerges from the interaction between oceanographic conditions and geographic location, a process that is likely to be repeated in other reef systems. Such natural resilience of reef systems will become increasingly important as the frequency of disturbances accelerates under climate change. PMID:29182630

Cruise report RV Ocean Surveyor Cruise 0-1-00-GM; the bathymetry and acoustic backscatter of the Pinnacles area; northern Gulf of Mexico, May 23, through June 10, 2000; Venice, LA to Venice, LA

USGS Publications Warehouse

Gardner, James V.; Sulak, Kenneth J.; Dartnell, Peter; Hellequin, Laurent; Calder, Brian R.; Mayer, Larry A.

2000-01-01

An extensive deep (~100 m) reef tract occurs on the Mississippi-Alabama outer continental shelf (OCS). The tract, known as "The Pinnacles", is apparently part of a sequence of drowned reef complexes along the "40-fathom" shelf edge of the northern Gulf of Mexico (Ludwick and Walton, 1957). It is critical to determine the accurate geomorphology of deep-reefs because of their importance as benthic habitats for fisheries. The Pinnacles were mapped by Ludwick and Walton (1957) using a single-beam echo sounder but the spatial extent and morphology were interpreted from a series of widely separated, poorly navigated bathymetric profiles. Other recent studies, supported by Minerals Management Service (MMS), used towed sidescan sonars and single-channel seismic-reflection profiling. None of the existing studies provide the quality of geomorphic data necessary for reasonable habitat studies. The fish faunas of shallow hermatypic reefs have been well studied, but those of deep ahermatypic reefs have relatively ignored. The ecology of deep ahermatypic reefs is fundamentally different from hermatipic reefs because autochthonous intracellular symbiotic zooxanthellae (the carbon source for hermatypic corals) do not form the base of the trophic web. Instead, exogenous plankton, transported to the reef by currents, serves as the primary carbon source. Deep OCS reefs also lie below the practical working depths for SCUBA; consequently, remote investigations from a ship or in situ investigations using submersibles or ROVs are required. Community structure and trophodynamics of demersal fishes of the Pinnacles are presently the focus of USGS reseach. A goal of the research is to answer questions concerning the relataive roles played by geomorphology and surficial geology in the interaction with and control of biological differentiation. OCS reefs are important because we now know that such areas are important coral reef fish havens, key spawning 2 sites, and a critical early larval and juvenile habitats for economically important sport/food fishes. Also, deep-reef ecosystems as well as the fish populations they sustain are impacted by intensive oil-field development. It is now known that deep OCS reefs function as a key source of re-population (via seasonal and ontogenetic migration) of already heavily impacted inshore reefs. A reflection of this realization is the recent closure by the Gulf States Fisheries Management Council of a 600 mi 2 area of the Florida Middle Grounds (another unmapped major "40-fathom" OCS reef complex) to commercial fishing to preserve grouper spawning aggregations. It is known that the Pinnacles reefs support a lush fauna of ahermatypic hard corals, soft corals, black corals, sessile crinoids and sponges—together forming a living habitat for a well-developed fish fauna. The fish fauna comprises typical Caribbean reef fishes and Carolinian shelf fishes, plus epipelagic fishes, and a few deep-sea fishes. The base of the megafaunal invertebrate food web is plankton, borne by essentially continuous semi-laminar currents flowing predominantly out of the SW, up, along and across the shelf edge. These currents are intercepted by pinnacles reefs, which lie roughly in two linear tracts, parallel to the coastline (see fig. 1 in report). USGS research initiated in 1997 (Sulak et al., in progress) has demonstrated that the Pinnacles reef fish fauna is dominated by planktivorous fishes. Ongoing food habits, trophic web and stable isotope analyses by the USGS are reinforcing a basic picture of deep OCS reefs as ecosystems based on exogenous current-borne plankton. Long-term current meter deployments have demonstrated that the >3 m,

A Bayesian-Based System to Assess Wave-Driven Flooding Hazards on Coral Reef-Lined Coasts

NASA Astrophysics Data System (ADS)

Pearson, S. G.; Storlazzi, C. D.; van Dongeren, A. R.; Tissier, M. F. S.; Reniers, A. J. H. M.

2017-12-01

Many low-elevation, coral reef-lined, tropical coasts are vulnerable to the effects of climate change, sea level rise, and wave-induced flooding. The considerable morphological diversity of these coasts and the variability of the hydrodynamic forcing that they are exposed to make predicting wave-induced flooding a challenge. A process-based wave-resolving hydrodynamic model (XBeach Non-Hydrostatic, "XBNH") was used to create a large synthetic database for use in a "Bayesian Estimator for Wave Attack in Reef Environments" (BEWARE), relating incident hydrodynamics and coral reef geomorphology to coastal flooding hazards on reef-lined coasts. Building on previous work, BEWARE improves system understanding of reef hydrodynamics by examining the intrinsic reef and extrinsic forcing factors controlling runup and flooding on reef-lined coasts. The Bayesian estimator has high predictive skill for the XBNH model outputs that are flooding indicators, and was validated for a number of available field cases. It was found that, in order to accurately predict flooding hazards, water depth over the reef flat, incident wave conditions, and reef flat width are the most essential factors, whereas other factors such as beach slope and bed friction due to the presence or absence of corals are less important. BEWARE is a potentially powerful tool for use in early warning systems or risk assessment studies, and can be used to make projections about how wave-induced flooding on coral reef-lined coasts may change due to climate change.