Phytophthora stricta isolated from Rhododendron maximum in Pennsylvania

USDA-ARS?s Scientific Manuscript database

During a survey in October 2013, in the Michaux State Forest in Pennsylvania , necrotic Rhododendron maximum leaves were noticed on mature plants alongside a stream. Symptoms were nondescript necrotic lesions at the tips of mature leaves. Colonies resembling a Phytophthora sp. were observed from c...

New species of Mycosphaerella from Myrtaceae in plantations and native forests in eastern Australia.

PubMed

Carnegie, Angus J; Burgess, Treena I; Beilharz, Vyrna; Wingfield, Michael J

2007-01-01

The majority of Mycosphaerella species from eucalypts (Eucalyptus, Corymbia and Angophora) in Australia have been recorded only from trees growing in plantations. This illustrates a bias in research in the past two decades toward commercial enterprise, and it emphasises a lack of understanding of the occurrence of these important fungi under natural conditions. Surveys of foliar fungi in native forests in eastern Australia, as well as adjacent plantations, thus have been initiated in recent years. In this study we describe four new species of Mycosphaerella from Eucalyptus spp. as well as other Myrtaceae. Mycosphaerella tumulosa sp. nov. (anamorph: Pseudocercospora sp.) was found on more than seven species of Eucalyptus and Corymbia in native forests and plantations in northeastern New South Wales and southeastern Queensland and appears to be relatively common, although not damaging to these trees. Mycosphaerella multiseptata sp. nov. was recorded from several locations on species of Angophora in native forests and amenity plantings. Mycosphaerella pseudovespa sp. nov. was found in one location in native forest on E. biturbinata. The first species of Mycosphaerella to be described from Syncarpia, M. syncarpiae sp. nov., was found in native forests in numerous locations from Sydney through to northeastern New South Wales and appears to be relatively common.

Bifiguratus adelaidae, gen. et sp. nov., a new member of Mucoromycotina in endophytic and soil-dwelling habitats

USDA-ARS?s Scientific Manuscript database

Illumina amplicon sequencing of soil in a temperate pine forest in the southeastern United States detected an abundant, N-responsive fungal genotype of unknown phylogenetic affiliation. Two isolates with ribosomal sequences consistent with that genotype were subsequently obtained in culture. Examina...

Nesting habits of Centris (Hemisiella) dichrootricha (Hymenoptera: Apidae) in the Northern Cerrado of Brazil.

PubMed

Carvalho, Gracy C A; Carreira, Léa M M; Rêgo, Márcia M C; Albuquerque, Patricia M C

2016-09-01

The Neotropical bee Centris (Hemisiella) dichrootricha is a solitary bee that nests in pre-existing cavities that occur in the rain forest. This study describes the nesting biology of C. dichrootricha and its preference for nesting in Cerrado and gallery forest habitats. The study was conducted from January 2012 and December 2013, in Mirador State Park in the municipality of Formosa da Serra Negra, Maranhão State, Brazil. For this, wooden trap-nests of 6, 8, 10, 12, 14 and 16 mm in diameter were used; a total of 300 trap-nests were placed in the gallery forest and Cerrado areas, respectively. Traps were monitored monthly and all completed nests were collected and replaced with empty ones. The nests were then taken to the laboratory to analyze bee development and emergence, nests characteristics and parasites presence. The species used 29 of the trap-nests, which had diameters of 8, 10, 12 and 14 mm. A total of 87 C. dichrootricha specimens emerged. The nests were parasitized by two bee species, Mesocheira bicolor (Apinae) and Coelioxys sp. (Megachilinae), and one fly species, Antrax sp. (Diptera). The highest nesting incidence of 72.4 % was observed in the gallery forest, whereas only 27.6 % in the Cerrado; this difference in habitat use was significant (χ² = 5.56; p < 0.05; DF = 1). For the nests that were built in the gallery forest, 80.9% of the soil originated from the Cerrado. The females were significantly larger than the males (F1, 76 = 595.19; p < 0.001). There were 11 pollen types that belonged to six families. Pollen of the family Malpighiaceae was most frequently used, with four species represented (Byrsonima crassifolia, B. rotunda, B. spicata and Heteropterys sp.). C. dichrootricha showed a preference for nesting in cavities of various diameters in gallery forest sites. The present study provides a novel description of the nesting habits and biology of C. dichrootricha in habitats of Central/Southern Maranhão. C. dichrootricha primarily used resources from the Cerrado, including soil to build their nests, pollen and floral oils; we concluded that gallery forest and Cerrado areas are intrinsically related to the maintenance of local populations of this species.

Description of four new genera and five new species of cicadas from New Caledonia (Insecta: Hemiptera, Cicadoidea, Cicadidae).

PubMed

Delorme, Quentin

2017-03-13

The four endemic new genera Paulaudalna gen. nov., Bispinalta gen. nov., Melanesiana gen. nov. and Strepuntalna gen. nov. are described from New Caledonia. The genus Paulaudalna includes two new species: Paulaudalna marginata sp. nov., as type species, and Paulaudalna amieuensis sp. nov. The genus Bispinalta is described from the new species Bispinalta caledonica sp. nov., and comes from bushy forest at summit of pic Ouitchambo at Boulouparis. The genus Melanesiana is described from the new species Melanesiana kataouii sp. nov., that is found in bushy forest at massif du Kepeto (Pouembout). The genus Strepuntalna is represented by the new species Strepuntalna. renaudetii sp. nov., and is encountered in bushy forest of south and central chain. Except Paulaudalna amieuensis, male calling songs of the new species are described from field recordings.

Explorative study of tropical pitcher plants (Nepenthes sp.) types and insects that trapped inside in Sebangau National Park Palangka Raya Central Kalimantan

NASA Astrophysics Data System (ADS)

Lestariningsih, Nanik; Setyaningsih, Denik

2017-01-01

Pitcher plants (Nepenthes sp.) is a plant with unique shape either of shades of colors, pouch shape and its capability in catching insects. Pitcher plant (Nepenthes sp.) is one of the plants that protected under Law Number. 5 of 1990 about Conservation of Biological Resources and Ecosystem and Government Regulation Number 7/1999 about Preservation of Plants and Animals. Sebangau National Park is one of representative of peat swamp ecosystem and one of some types of pitcher plants (Nepenthes sp.) habitat. This study aimed to determine the types and diversity levels of pitcher plants (Nepenthes sp.) and the trapped insects inside in Sebangau National and to determine the differences of diversity levels of pitcher plants (Nepenthes sp.) and the trapped insects inside in the opened and closed forest in Sebangau National Park. The research type was conducted descriptive qualitative research. The method used survey method with purpossive sampling technique.The result of the study the number of pitcher plants (Nepenthes sp.) obtained in opened forest were three types consist of Nepenthes mirabilis, Nepenthes rafflesiana and Nepenthes gracilis with two types insects trapped inside those were Diptera ordo and Hymenoptera ordo. While the number of pitcher plants (Nepenthes sp.) obtained in closed forest as many as two types consist of Nepenthes ampullaria and Nepenthes rafflesiana with two type insects trapped inside those were Diptera ordo and Hymenoptera ordo. The results of the analysis calculation pitcher plants (Nepenthes sp.) species diversity index in opened and closed forest showed lower category. The diversity in row were 1 and 0,45 with H’ criteria ≤ 1 low diversity. The results of the study of insects trapped inside of pitcher plants (Nepenthes sp.) obtained in opened and closed forest showed low category. The diversity in a row were 0,63 and 0,52 with the criteria of H’ ≤ 1 low diversity.

Trypanosoma sp. diversity in Amazonian bats (Chiroptera; Mammalia) from Acre State, Brazil.

PubMed

Dos Santos, Francisco C B; Lisboa, Cristiane V; Xavier, Samanta C C; Dario, Maria A; Verde, Rair de S; Calouro, Armando M; Roque, André Luiz R; Jansen, Ana M

2017-11-16

Bats are ancient hosts of Trypanosoma species and their flying ability, longevity and adaptability to distinct environments indicate that they are efficient dispersers of parasites. Bats from Acre state (Amazon Biome) were collected in four expeditions conducted in an urban forest (Parque Zoobotânico) and one relatively more preserved area (Seringal Cahoeira) in Rio Branco and Xapuri municipalities. Trypanosoma sp. infection was detected by hemoculture and fresh blood examination. Isolated parasite species were identified by the similarity of the obtained DNA sequence from 18S rDNA polymerase chain reaction and reference strains. Overall, 367 bats from 23 genera and 32 species were examined. Chiropterofauna composition was specific to each municipality, although Artibeus sp. and Carollia sp. prevailed throughout. Trypanosoma sp. infection was detected in 85 bats (23·2%). The most widely distributed and prevalent genotypes were (in order) Trypanosoma cruzi TcI, T. cruzi marinkellei, Trypanosoma dionisii, T. cruzi TcIV and Trypanosoma rangeli. At least one still-undescribed Trypanosoma species was also detected in this study. The detection of T. cruzi TcI and TcIV (the ones associated with Chagas disease in Amazon biome) demonstrates the putative importance of these mammal hosts in the epidemiology of the disease in the Acre State.

Forest Health in the Southeastern United States: Assessment of the State of the Science

DTIC Science & Technology

2008-06-01

pathogens, including imbalances in populations of in- sect pests and root-infesting fungi (e.g., Leptographium species), that may degrade tree physiological...reintroduction exacerbates stress levels and contributes to further root colonization by fungi such as Leptographium sp. Root disease caused by the...Coleoptera: Scolytidae), are likely vectors for the Leptographium/Ophiostomatoid fungi (Eckhardt et al. 2004). Spores of these fungi are not suited to

Canker Stain Affects Delaware Sycamores Pest Alert

Treesearch

Alan Iskra; Gary Schwetz; Michael Valenti

2001-01-01

An often fatal disease of American sycamore (Platanus occidentalis), known as canker stain, is caused by the fungus, Ceratocystis fimbriata f.sp. platani. This fungus, indigenous to the United States, occurs in urban and forested areas from New Jersey to Georgia and west to Missouri and Louisiana. Other trees affected are the Oriental plane (Platanus orientalis) and...

The circadian rhythm of locomotory activity in a Neotropical forest scorpion, Opisthacanthus sp. (Scorpionidae)

NASA Astrophysics Data System (ADS)

Cloudsley-Thompson, J. L.; Constantinou, C.

1985-03-01

Opisthacanthus sp. from Panama resembles tropical forest scorpions from other zoogeographical regions in being comparatively inactive and showing some movement in light. Its circadian rhythm is not clear cut. It has a dirty appearance and a repugnatorial odour, a phenomenon not previously recorded in scorpions.

New species of Metachela Coquillett (Diptera, Empididae) from the Atlantic Forest, Brazil and a key to the Neotropical species.

PubMed

Câmara, Josenir Teixeira; Rafael, Jose Albertino

2017-01-01

Two new species of Metachela Coquillett from the Brazilian Atlantic Forest, M. danitakiyae sp. n. from Rio de Janeiro and Minas Gerais and M. spinulosa sp. n. from Minas Gerais, are described and illustrated. A key to the Neotropical species is provided.

High-Quality Draft Genome Sequences of Four Lignocellulose-Degrading Bacteria Isolated from Puerto Rican Forest Soil: Gordonia sp., Paenibacillus sp., Variovorax sp., and Vogesella sp.

DOE PAGES

Woo, Hannah L.; DeAngelis, Kristen M.; Teshima, Hazuki; ...

2017-05-04

In this paper, we report the high-quality draft genome sequences of four phylogenetically diverse lignocellulose-degrading bacteria isolated from tropical soil ( Gordonia sp., Paenibacillus sp., Variovorax sp., and Vogesella sp.) to elucidate the genetic basis of their ability to degrade lignocellulose. These isolates may provide novel enzymes for biofuel production.

High-Quality Draft Genome Sequences of Four Lignocellulose-Degrading Bacteria Isolated from Puerto Rican Forest Soil: Gordonia sp., Paenibacillus sp., Variovorax sp., and Vogesella sp.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Woo, Hannah L.; DeAngelis, Kristen M.; Teshima, Hazuki

In this paper, we report the high-quality draft genome sequences of four phylogenetically diverse lignocellulose-degrading bacteria isolated from tropical soil ( Gordonia sp., Paenibacillus sp., Variovorax sp., and Vogesella sp.) to elucidate the genetic basis of their ability to degrade lignocellulose. These isolates may provide novel enzymes for biofuel production.

Helminth communities of two populations of Myotis chiloensis (Chiroptera: Vespertilionidae) from Argentinean Patagonia.

PubMed

Falconaro, Antonella C; Vega, Rocío M; Viozzi, Gustavo P

2018-04-01

Most of the studies on chiropteran endoparasites in Argentina come from the Central and Northeast regions of the country, and there is only one parasitological study of bats from the Argentinean Patagonia. The aim of this study is to describe the helminth fauna of 42 Myotis chiloensis, comparing the composition and the structure of the endoparasite communities between two populations, inhabiting different environments in Andean humid forest and the ecotone between forest and Patagonian steppe. A total of 697 helminths were recovered from 33 bats: five species of trematodes, Ochoterenatrema sp., Paralecithodendrium sp., Parabascus limatulus , Parabascus sp., and Postorchigenes cf. joannae , two species of cestodes, Vampirolepis sp. 1 and Vampirolepis sp. 2, and three species of nematodes, Allintoshius baudi , Physaloptera sp., and Physocephalus sp. All the helminths, but Physocephalus sp., were recovered from the small and large intestine. This is the first survey of M. chiloensis ' helminth fauna. All the species, but A. baudi , represent new records of helminths in Patagonian bats. There were differences of parasite species richness between localities and both bat populations share almost half of the endoparasite species. Different preferences for intestinal regions were found for three species of trematodes in the bats from the site in the humid forest. Myotis chiloensis serves as both a definitive and intermediate host for endoparasites in the Patagonian ecosystem.

Annotated list of Tettigoniidae (Orthoptera) from the East Usambara Mountains, Tanzania and new Tettigoniidae species from East Africa.

PubMed

Hemp, Claudia

2013-12-21

A list of the Tettigoniidae (Orthoptera) of the East Usambara Mountains is presented and 16 new species are described from East Africa. A total number of 29 Tettigoniidae species is recorded for the East Usambara Mountains. New species are described from the Shimba Hills in Kenya, coastal Tanzania from the Kazimzumbwi forest reserve, Mt Kilimanjaro, the East and West Usambara and Uluguru Mountains in Tanzania, namely in Conocephalinae Afroagraecia pwania n. sp., Afroagraecia shimbaensis n. sp., Afroanthracites discolor n. sp., Afroanthracites jagoi n. sp. and Afroanthracites viridis n. sp., in Meconematinae Afrophisis flagellata n. sp., Afrophisis kisarawe n. sp., Afrophisis mazumbaiensis n. sp. and Afrophisis pseudoflagellata n. sp., in Hexacentrinae Aerotegmina megaloptera n. sp., in Mecopodinae Apteroscirtus cristatus n. sp., and A. planidorsatus n. sp., in Phaneropterinae Gelotopoia amabilis n. sp., and in Pseudophyllinae Cymatomerella pardopunctata n. sp. and Cymatomera viridimaculata n. sp. Seven species are endemic to the East Usambara Mountains which are 25% of the recorded forest-bound bush crickets. The Tettigoniidae fauna is compared between the East Usambara Mountains and Mt Kilimanjaro and mechanisms of speciation discussed in Orthoptera for the area. New Tettigoniidae records are given for Mt Kilimanjaro (Oxyecous apertus Ragge, Tropidonotacris grandis Ragge and Eurycorypha conclusa Hemp).

Succession change of microorganisms on plant waste decomposition in simulation modelling field experiment

NASA Astrophysics Data System (ADS)

Vinogradova, Julia; Perminova, Evgenia; Khabibullina, Fluza; Kovaleva, Vera; Lapteva, Elena

2016-04-01

Plant waste decomposition processes are closely associated with living activity of soil microbiota in aboveground ecosystems. Functional activity of microorganisms and soil invertebrates determines plant material transformation rate whereby changes in plant material chemical composition during destruction - succession change of soil biota. The purpose of the work was revealing the mechanism of microorganisms succession change during plant waste decomposition in middle-taiga green-moss spruce forests and coniferous-deciduous secondary stands formed after earlier cut bilberry spruce forests. The study materials were undisturbed bilberry spruce forest (Sample Plot 1 - SP1) and coniferous-deciduous secondary stands which were formed after tree cutting activities of 2001-2002 (SP2) and 1969 and 1970 (SP3). Plant material decomposition intensity was determined in microcosms isolated into kapron bags with cell size of 1 mm. At SP1 and SP2, test material was living mosses and at SP3 - fallen birch and aspen leaves. Every test material was exposed for 2 years. Destruction rate was calculated as a weight loss for a particular time period. Composition of micromycetes which participated in plant material decomposition was assessed by the method of inoculation of soil extract to Getchinson's medium and acidified Czapek's medium (pH=4.5). Microbe number and biomass was analyzed by the method of luminescent microscopy. Chemical analysis of plant material was done in the certified Ecoanalytical Laboratory of the Institute of Biology Komi SC UrD RAS. Finally, plant material destruction intensity was similar for study plots and comprised 40-44 % weight loss for 2 years. The strongest differences in plant material decomposition rate between undisturbed spruce forests and secondary after-cut stands were observed at first stages of destruction process. In the first exposition year, mineralizing processes were most active in undisturbed spruce forest. Decomposition rate in cuts at that period was less by a factor of 1.7-2.3. The highest diversity of moss-decomposing micromycetes (30 species of microscopic fungi of 13 genera) was found for undisturbed spruce forest (SP1). At cuts, the figures were 17 and 23 species of micromycetes, correspondingly. Succession change in composition of micromycetes was best pronounced in undisturbed spruce forest. At cuts, there was no clear mechanism of micromycetes species diversity change during plant waste decomposition. This could serve an anthropogenic disturbance marker of taiga ecosystems. Generally, microscopic moss- and leaf-decomposing fungi at all plots were very species specific. Total biomass of microorganisms in microcosms at cuts was less than that at undisturbed spruce forest by 1.4-1.6 time. Its structure was dominated by mycelium and fungal spores (98-99 % total biomass). On leaf waste decomposition (SP3), microbe biomass got more bacteria. By the obtained data, undisturbed middle-taiga spruce forests have better conditions for living activity of plant waste-decomposing microscopic fungi. This is evidenced by less species diversity of microscopic fungi, shorter length and less biomass of mycelium at cuts as compared with undisturbed spruce forests.

Titanogryllus n. gen., the largest Gryllinae cricket from the Neotropical Region with three new species from the Brazilian Atlantic Forest (Orthoptera, Grylloidea, Gryllidae).

PubMed

Jaiswara, Ranjana; Souza-Dias, Pedro G B; De Campos, Lucas Denadai; RedÜ, Darlan R; De Mello, Francisco de A G; Desutter-Grandcolas, Laure

2018-03-29

Titanogryllus, a new genus and three new species T. salgado n. gen. n. sp., T. oxossi n. gen. n. sp., and T. oxente n. gen. n. sp. from subfamily Gryllinae (Grylloidea, Gryllidae) are described from the Brazilian Atlantic Forest. This genus is characterized by its very large size, and establishes a new record for the largest known cricket from Neotropical Region. The new taxa are characterized by their external morphology and male and female genitalia.

Uredo maua, sp. nov., and Uromyces tairae: Additions to the rust flora of Hawai’i

USGS Publications Warehouse

Gardner, Donald E.; Flynn, Timothy W.

1998-01-01

Uredo maua, on Xylosma hawaiiense (Flacourtiaceae), an endemic tree of Hawaiian forests, is newly described as an addition to Hawai’i's native rust flora. Uredo wakensis, originally described from Wake Island and reported from other Pacific islands on Tournefortia argentea (Boraginaceae), represents the uredinial state of Uromyces tairae, described from Okinawa. This rust is newly reported from Hawai’i.

Comparative morphometric and chemical analyses of phenotypes of two invasive ambrosia beetles (Euwallacea spp.) in the United States

Treesearch

Yigen Chen; Paul L. Dallara; Lori J. Nelson; Tom W. Coleman; Stacy M. Hishinuma; Daniel Carrillo; Steven J. Seybold

2016-01-01

The polyphagous shot hole borer (PSHB), Euwallacea sp., was first detected in 2003 in Los Angeles County, California, USA. Recently, this invasive species has become a major pest of many hardwood trees in urban and wildland forests throughout southern California. PSHB is nearly identical in morphology and life history to the tea shot hole borer (...

Estimating site index from tree species composition in mixed stands of upland eastern hardwoods: Should shrubs be included?

Treesearch

W. Henry McNab

2010-01-01

Site index is the most widely used method for site quality assessment in hardwood forests of the eastern United States. Its application in most oak (Quercus sp. L.) dominated stands is often problematic, however, because available sample trees usually do not meet important underlying assumptions of the method. A prototype method for predicting site index from tree...

[Diversity of ectomycorrhizal fungi associated with Picea asperata in Xin Jiashan Forest of Qinling Mountains].

PubMed

Geng, Rong; Geng, Zengchao; Huang, Jian; He, Wenxiang; Hou, Lin; She, Diao; Zhao, Jun; Shang, Jie

2015-07-04

To study the diversity of ectomycorrhizal fungi associated with Picea asperata in Xin Jiashan Forest of Qinling Mountains. This method combined the field investigation, morphological and molecular biology to identify ectomycorrhizal fungi. There were 37 different ectomycorrhizal fungi under 14 genera of 10 families on spruce in Xin Jiashan Forest of Qinling Mountains, 34 types belonged to Basidiomycetes, 1 to Ascomycete and 2 to unknown species. Among these identified ectomycorrhizal fungi types, Inocybe sp. was the dominant group; Russula nauseosa was the most dominant species; Hygrophorus sp., Tomentella coerulea, Inocybe sp. 1, Helotiaceae sp. and Lactarius deterrimus were common species; and the rest species were rare species. The large number but relatively rare species of dominant family and the small number but relatively more species of rare family survived in ectomycorrhizal fungal communities of Picea asperata. For the extreme degradation in arid area of western ecological system, identifing some rare family for further development and utilization had very important practical significance.

Draft Genome Sequence of Cellulolytic and Xylanolytic Paenibacillus sp. A59, Isolated from Decaying Forest Soil from Patagonia, Argentina

PubMed Central

Ghio, Silvina; Martinez Cáceres, Alfredo I.; Talia, Paola; Grasso, Daniel H.

2015-01-01

Paenibacillus sp. A59 was isolated from decaying forest soil in Argentina and characterized as a xylanolytic strain. We report the draft genome sequence of this isolate, with an estimated genome size of 7 Mb which harbor 6,424 coding sequences. Genes coding for hydrolytic enzymes involved in lignocellulose deconstruction were predicted. PMID:26494679

Forest health status in Russia

Treesearch

Vladislav A. Alexeyev

1998-01-01

About 886.5 Mha in Russia is occupied by forests, including 763.5 Mha of tree stands and 123 Mha of nonstocked lands. The Russian forests comprise about 22 percent of the earth's forest area or 43 percent of the earth's temperate and boreal forests. Main forest-forming species are Larix sp. (32 percent of the growing stock), Pinus...

A new species of Hemerobiella Kimmins (Neuroptera, Hemerobiidae) from Venezuela with notes on the genus.

PubMed

Sosa, Francisco; Lara, Rogéria I R; Martins, Caleb C

2015-10-09

Hemerobiella periotoi Sosa & Lara sp. nov. is described from Venezuela. The new species was collected at the edges of a mature cloud forest in Lara state. This is the third species known in Hemerobiella Kimmins, and the second recorded from Venezuela. Additionally, new Venezuelan records and illustrations of H. oswaldi Monserrat, as well as, a key to Hemerobiella species are provided.

[Soil propagule bank of ectomycorrhizal fungi in natural forest of Pinus bungeana].

PubMed

Zhao, Nan Xing; Han, Qi Sheng; Huang, Jian

2017-12-01

To conserve and restore the forest of Pinu bungeana, we investigated the soil propagule bank of ectomycorrhizal (ECM) fungi in a severely disturbed natural forest of P. bungeana in Shaanxi Province, China. We used a seedling-bioassay method to bait the ECM fungal propagules in the soils collected from the forest site. ECM was identified by combining morph typing with ITS-PCR-sequencing. We obtained 73 unique sequences from the ECM associated with P. bungeana seedlings, and assigned them into 12 ECM fungal OTUs at the threshold of 97% based on the sequence similarity. Rarefaction curve displayed almost all ECM fungi in the propagule bank were detected. The most frequent OTU (80%) showed poor similarity (75%) with existing sequences in the online database, which suggested it might be a new species. Cenococcum geophilum, Tomentella sp., Tuber sp. were common species in the propagule bank. Although C. geophilum and Tomentella sp. were frequently detected in other soil propagule banks of pine forest, the most frequent OTU was not assigned to known genus or family, which indicated the host-specif of ECM propagule banks associa-ted with P. bungeana. This result confirmed the importance of the special ECM propagule banks associated with P. bungeana for natural forest restoration.

Hygroscopic growth of size-resolved, emission-source classified, aerosol particles sampled across the United States

NASA Astrophysics Data System (ADS)

Shingler, T.; Crosbie, E. C.; Ziemba, L. D.; Anderson, B. E.; Campuzano Jost, P.; Jimenez, J. L.; Mikoviny, T.; Wisthaler, A.; Sorooshian, A.

2014-12-01

The hygroscopic growth of atmospheric aerosol particles is a key air quality parameter, impacting the radiation budget, visibility, and cloud formation. During the DC3 and SEAC4RS field campaigns (>300 total flight hours), measurements were made over 32 US states, Canada, the Pacific Ocean, and the Gulf of Mexico, between the surface and 41,000 feet ASL. The aircraft research payloads included a suite of in-situ aerosol and gas phase instruments. The Differential Aerosol Sizing and Hygroscopicity Spectrometer Probe (DASH-SP) and the Langley Aerosol Research Group Experiment (LARGE) humidified nephelometer instrument applied different techniques to measure water uptake by aerosol particles at prescribed relative humidity values. Size-resolved growth factor (GF ≡ Dp,wet/Dp,dry) measurements by the DASH-SP are compared to bulk scattering measurements (f(RH) ≡ σscat,wet/σscat,dry) by the LARGE instrument. Spatial location and volatile organic compound tracers such as isoprene and acetonitrile are used to classify the origin of distinct air masses, including: forest fires, biogenic-emitting forests, agricultural use lands, marine boundary layer, urban, and rural background. Analyses of GF results by air mass origin are reported and results are compared with f(RH) measurements. A parameterization between the f(RH) and GF measurements and its potential uses are discussed.

Draft Genome Sequence of Cellulolytic and Xylanolytic Cellulomonas sp. Strain B6 Isolated from Subtropical Forest Soil

PubMed Central

Piccinni, Florencia; Murua, Yanina; Ghio, Silvina; Talia, Paola; Rivarola, Máximo

2016-01-01

Cellulomonas sp. strain B6 was isolated from a subtropical forest soil sample and presented (hemi)cellulose-degrading activity. We report here its draft genome sequence, with an estimated genome size of 4 Mb, a G+C content of 75.1%, and 3,443 predicted protein-coding sequences, 92 of which are glycosyl hydrolases involved in polysaccharide degradation. PMID:27563050

Draft Genome Sequence of Cellulolytic and Xylanolytic Paenibacillus sp. A59, Isolated from Decaying Forest Soil from Patagonia, Argentina.

PubMed

Ghio, Silvina; Martinez Cáceres, Alfredo I; Talia, Paola; Grasso, Daniel H; Campos, Eleonora

2015-10-22

Paenibacillus sp. A59 was isolated from decaying forest soil in Argentina and characterized as a xylanolytic strain. We report the draft genome sequence of this isolate, with an estimated genome size of 7 Mb which harbor 6,424 coding sequences. Genes coding for hydrolytic enzymes involved in lignocellulose deconstruction were predicted. Copyright © 2015 Ghio et al.

A Potentially Endangered New Species of Euptychia Hübner, 1818 (Lepidoptera: Nymphalidae: Satyrinae) from the Atlantic Coastal Forest of Brazil.

PubMed

Nakahara, S; Barbosa, E P; Freitas, A V L

2017-06-01

A new satyrine species in the subtribe Euptychiina, Euptychia atlantica Nakahara & Freitas sp. nov., is described from the Atlantic coastal forest of Brazil. Based on the existing museum specimens, E. atlantica sp. nov. is known from the coastal montane forests of Rio de Janeiro to south Bahia, a unique biogeographical region which is undergoing rapid degradation. Illustrations of adults and their genitalia, as well as a distribution map, are provided herein, in addition to a discussion of the relationships and conservation status of the new species.

Algological and Mycological Characterization of Soils under Pine and Birch Forests in the Pasvik Reserve

NASA Astrophysics Data System (ADS)

Korneikova, M. V.; Redkina, V. V.; Shalygina, R. R.

2018-02-01

The structure of algological and mycological complexes in Al-Fe-humus podzols (Albic Podzols) under pine and birch forests of the Pasvik Reserve is characterized. The number of micromycetes is higher in more acid soils of the pine forest, while the species diversity is greater under the birch forest. The genus Penicillium includes the largest number of species. The greatest abundance and occurrence frequency are typical for Penicillium spinulosum, P. glabrum, and Trichoderma viride in pine forest and for Umbelopsis isabellina, Mucor sp., Mortierella alpina, P. glabrum, Aspergillus ustus, Trichoderma viride, and T. koningii in birch forest. Cyanobacteria-algal cenoses of the investigated soils are predominated by green algae. Soils under birch forest are distinguished by a greater diversity of algal groups due to the presence of diatoms and xanthophytes. Species of frequent occurrence are represented by Pseudococcomyxa simplex and Parietochloris alveolaris in soils of the pine forest and by Tetracystis cf. aplanospora, Halochlorella rubescens, Pseudococcomyxa simplex, Fottea stichococcoides, Klebsormidium flaccidum, Hantzschia amphioxys, Microcoleus vaginatus, and Aphanocapsa sp. in soils under birch forest

Dispatch from the field: ecology of ground-web-building spiders with description of a new species (Araneae, Symphytognathidae)

PubMed Central

2014-01-01

Abstract Crassignatha danaugirangensis sp. n. (Araneae: Symphytognathidae) was discovered during a tropical ecology field course held at the Danau Girang Field Centre in Sabah, Malaysia. A taxonomic description and accompanying ecological study were completed as course activities. To assess the ecology of this species, which belongs to the ground-web-building spider community, three habitat types were surveyed: riparian forest, recently inundated riverine forest, and oil palm plantation. Crassignatha danaugirangensis sp. n. is the most abundant ground-web-building spider species in riparian forest; it is rare or absent from the recently inundated forest and was not found in a nearby oil palm plantation. The availability of this taxonomic description may help facilitate the accumulation of data about this species and the role of inundated riverine forest in shaping invertebrate communities. PMID:24891829

Draft Genome Sequence of Cellulolytic and Xylanolytic Cellulomonas sp. Strain B6 Isolated from Subtropical Forest Soil.

PubMed

Piccinni, Florencia; Murua, Yanina; Ghio, Silvina; Talia, Paola; Rivarola, Máximo; Campos, Eleonora

2016-08-25

Cellulomonas sp. strain B6 was isolated from a subtropical forest soil sample and presented (hemi)cellulose-degrading activity. We report here its draft genome sequence, with an estimated genome size of 4 Mb, a G+C content of 75.1%, and 3,443 predicted protein-coding sequences, 92 of which are glycosyl hydrolases involved in polysaccharide degradation. Copyright © 2016 Piccinni et al.

Australian Assassins, Part I: A review of the Assassin Spiders (Araneae, Archaeidae) of mid-eastern Australia

PubMed Central

Rix, Michael G.; Harvey, Mark S.

2011-01-01

Abstract The Assassin Spiders of the family Archaeidae are an ancient and iconic lineage of basal araneomorph spiders, characterised by a specialised araneophagic ecology and unique, ‘pelican-like’ cephalic morphology. Found throughout the rainforests, wet sclerophyll forests and mesic heathlands of south-western, south-eastern and north-eastern Australia, the genus Austrarchaea Forster & Platnick, 1984 includes a diverse assemblage of relictual, largely short-range endemic species. With recent dedicated field surveys and significant advances in our understanding of archaeid biology and ecology, numerous new species of assassin spiders have been discovered in the montane sub-tropical and warm-temperate closed forests of mid-eastern Australia, including several rare or enigmatic taxa and species of conservation concern. This fauna is revised and 17 new species are described from south-eastern Queensland and eastern New South Wales: Austrarchaea alani sp. n., Austrarchaea aleenae sp. n., Austrarchaea binfordae sp. n., Austrarchaea christopheri sp. n., Austrarchaea clyneae sp. n., Austrarchaea cunninghami sp. n., Austrarchaea dianneae sp. n., Austrarchaea harmsi sp. n., Austrarchaea helenae sp. n., Austrarchaea judyae sp. n., Austrarchaea mascordi sp. n., Austrarchaea mcguiganae sp. n., Austrarchaea milledgei sp. n., Austrarchaea monteithi sp. n., Austrarchaea platnickorum sp. n., Austrarchaea raveni sp. n. and Austrarchaea smithae sp. n. Adult specimens of the type species, Austrarchaea nodosa (Forster, 1956) are redescribed from the Lamington Plateau, south-eastern Queensland, and distinguished from the sympatric species Austrarchaea dianneae sp. n. A key to species and a molecular phylogenetic analysis of COI and COII mtDNA sequences complement the species-level taxonomy, with maps, habitat photos, natural history information and conservation assessments provided for all species. PMID:21998529

Another new species of Phyllodytes (Anura: Hylidae) from the Atlantic Forest of northeastern Brazil.

PubMed

Orrico, Victor G D; Dias, Iuri R; Marciano, Euvaldo

2018-04-09

A new species of the genus Phyllodytes is described from the State of Bahia, in the Atlantic Rain Forest of Northeastern Brazil. Phyllodytes praeceptor sp. nov. can be differentiated from other species of Phyllodytes by its medium size (SVL 20.7-25.8 mm in males); odontoids moderately developed; vocal sac externally visible; eyes large and prominent; dorsum homogenously cream, except for a few scattered spots and blotches; venter areolate with two parallel, paramedial lines of larger tubercles; few tubercles in the ventral surface of thighs, the largest being the medial one; a large tubercle on the skin around the tibio-tarsal articulation; nuptial pad rounded and moderately expanded.

Molpa: A newly recorded genus (Orthoptera: Tettigoniidae: Phaneropterinae) from China.

PubMed

Wu, Chao; Yang, Zhen; Liu, Chun-Xiang; Zong, Cheng

2017-12-20

The genus Molpa Walker was previously considered to be disjunctly distributed in broad-leaf rain forests in India and Malaysia. Here we report one new species Molpa dulongensis sp. nov. from subtropic broad-leaf rain forests in southwestern Yunnan Province in China. This is a part of the Indo-Burma biodiversity hotspot area. So we can infer that Molpa is continuously distributed in broad-leaf rain forests found in Oriental Region. Redescription of the genus Molpa and description of the new species Molpa dulongensis sp. nov. are provided. The types are deposited in Insect Collection of Institute of Zoology, Chinese Academy of Sciences, Beijing, China (IZCAS).

Lignin characteristics in soil profiles of different plant communities in a subtropical mixed forest in Central China

NASA Astrophysics Data System (ADS)

Liu, F.; Wang, X.

2016-12-01

Lignin is widely considered as a major source of stable soil carbon, its content and degradation states are important indicators of soil carbon quality and stability. Few studies have explored the effects of plant communities on lignin characteristics in soils, and studies on lignin characteristics across soil depths resulted in contradictory findings. In this study, we investigated the lignin contents, their degradation states in the soil aggregates across three soil depths for four major plant communities in a subtropical mixed forest in central China. We found that lignin content in the litter of two deciduous species (Carpinus fargesii CF and Fagus Lucida FL) are higher than that in the two evergreen species ( Cyclobalanopsis multinervis CM and Schima parviflora SP). These differences maintained in the soil with a diminished scale. Lignin content showed a decreased trend in soil profiles of all plant communities, but no significant differences of degradation states were observed. The distribution of aggregation fractions was significantly different among plant communities, the SP community have higher percent of >2000 μm fraction (50.46%) and lower percent of <0.25 μm fraction (12.87%) than the CF community (40.05%, 21.90% respectively). The lignin content increased with decreasing aggregations size, however, no significant differences of lignin degradation states was observed among the four size aggregations. These results collectively reveal the influence of plant communities on lignin characteristics in soil, probably through litter input. Similar degradation states of lignin across soil profile and different size aggregates emphasized the importance of lignin movements association with soil water. This knowledge of lignin characteristics across soil profile can improve our understanding of soil carbon stability at different depths and how it may respond to changes in soil conditions.

Candida chanthaburiensis sp. nov., Candida kungkrabaensis sp. nov. and Candida suratensis sp. nov., three novel yeast species from decaying plant materials submerged in water of mangrove forests.

PubMed

Limtong, Savitree; Yongmanitchai, Wichien

2010-10-01

In a taxonomic study of yeasts isolated from decaying plant materials submerged in water of mangrove forests in Thailand, three strains isolated from tree bark (EM33(T)), a fallen leaf (EM40(T)) and a detached branch (SM56(T)) were found to represent three novel yeast species. On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, the sequence analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene, and the phylogenetic analysis, the three strains were assigned as three novel Candida species. They were named as Candida chanthaburiensis sp. nov. (type strain EM33(T) = BCC 23057(T) = NBRC 102176(T) = CBS 10926(T)), Candida kungkrabaensis sp. nov. (type strain EM40(T) = BCC 23060(T) = NBRC 102179(T) = CBS 10927(T)), and Candida suratensis sp. nov. (type strain SM56(T) = BCC 25961(T) = NBRC 103858(T) = CBS 10928(T)).

Anticyphon gen. nov., a new genus of Scirtidae (Coleoptera: Scirtoidea) inhabiting high altitude Andean cloud forests and páramo formation.

PubMed

Ruta, Rafał

2016-10-17

A new genus of Scirtidae is described to accommodate six newly described species distributed in the northern part of the Andes. Three species are described from Ecuador (Anticyphon davidsoni sp. nov., A. ecuadorensis sp. nov., A. paramoensis sp. nov.), two from Peru (A. oyonensis sp. nov., A. peruvianus sp. nov.), and a single one from Colombia (A. santanderensis sp. nov.). Morphological characters are illustrated with focus on hind wings, mouthparts and male genitalia. An identification key to species is provided.

Patterns of prey selection of Trypoxylon (Trypargilum) lactitarse Saussure (Hymenoptera: Crabronidae) in southern Brazil.

PubMed

Buschini, M L T; Borba, N A; Brescovit, A D

2008-08-01

This study was carried out in the Parque Municipal das Araucárias, in the municipality of Guarapuava, southern Brazil. A total of 449 T. lactitarse nests were collected using trap-nests of different diameters. Fifty three species of spiders belonging to 7 families were captured by T. lactitarse. Araneidae was the most captured family and has been strongly represented by the genus Eustala. Through Bray-Curtis's coefficient and the unweighted pair group method average (UPGMA), the spiders species can be divided into 3 groups: the smaller group includes the most abundant species (Eustala sp1, Eustala sp2, Acacesia villalobosi, Alpaida sp1 and Araneus corporosus), the second group includes species with intermediate abundance (Wagneriana iguape, Araneus omnicolor, Eustala sp4, Alpaida grayi, Eustala sp3, Larinia t-notata, Mangora sp1 and Wagneriana iguape), and the third and largest group includes the least abundant species (Aysha gr. brevimana 1, Eustala sp5, Wagneriana eupalaestra, Alpaida scriba, Alpaida veniliae, Araneus aff. omnicolor, Araneus sicki, Eustala sp8, Mangora sp2, Mangora sp3, Wagneriana juquia, Alpaida sp2, Araneus blumenau, Eustala sp6, Eustala sp7 and Ocrepeira galianoae). Of 2,029 identified spiders, 1,171 were captured in the Araucaria forest, 612 in grassland areas and 246 in the swamp. Grassland and swamp areas evidenced greater similarity between them than to the Araucaria Forest, regarding presence-absence of spider species in T. lactitarse's diet, as well as regarding species abundance in these habitats. The juvenile number (56%) was significantly higher than the female (38%) and male (6%) percentages.

Sergey gen. n., a new doryctine genus from temperate forests of Mexico and Cuba (Hymenoptera, Braconidae).

PubMed

Martínez, Juan José; Lázaro, Rubi Nelsi Meza; Pedraza-Lara, Carlos; Zaldívar-Riverón, Alejandro

2016-01-01

The new doryctine genus Sergey gen. n. is described with four new species (Sergey cubaensis Zaldívar-Riverón & Martínez, sp. n., Sergey coahuilensis Zaldívar-Riverón & Martínez, sp. n., Sergey tzeltal Martínez & Zalídivar-Riverón, sp. n., Sergey tzotzil Martínez & Zalídivar-Riverón, sp. n.) from temperate forests of Mexico and Cuba. Similar to many other doryctine taxa, the new genus has a considerably elongated, petiolate basal sternal plate of the first metasomal tergite, although it can be distinguished from these by having the mesoscutum sharply declivous anteriorly with sharp anterolateral edges. The described species have been characterised molecularly based on two mitochondrial (COI, cyt b) and one nuclear (28S) gene markers. Based on the mitochondrial gene genealogies reconstructed, the evidence suggests the existence of incomplete lineage sorting or hybridization in the populations from Chiapas and Oaxaca assigned to Sergey tzeltal sp. n.

Sergey gen. n., a new doryctine genus from temperate forests of Mexico and Cuba (Hymenoptera, Braconidae)

PubMed Central

Martínez, Juan José; Lázaro, Rubi Nelsi Meza; Pedraza-Lara, Carlos; Zaldívar-Riverón, Alejandro

2016-01-01

Abstract The new doryctine genus Sergey gen. n. is described with four new species (Sergey cubaensis Zaldívar-Riverón & Martínez, sp. n., Sergey coahuilensis Zaldívar-Riverón & Martínez, sp. n., Sergey tzeltal Martínez & Zalídivar-Riverón, sp. n., Sergey tzotzil Martínez & Zalídivar-Riverón, sp. n.) from temperate forests of Mexico and Cuba. Similar to many other doryctine taxa, the new genus has a considerably elongated, petiolate basal sternal plate of the first metasomal tergite, although it can be distinguished from these by having the mesoscutum sharply declivous anteriorly with sharp anterolateral edges. The described species have been characterised molecularly based on two mitochondrial (COI, cyt b) and one nuclear (28S) gene markers. Based on the mitochondrial gene genealogies reconstructed, the evidence suggests the existence of incomplete lineage sorting or hybridization in the populations from Chiapas and Oaxaca assigned to Sergey tzeltal sp. n. PMID:27408539

Basic ecology of the Oaxacan Spiny-tailed Iguana Ctenosaura oaxacana (Squamata: Iguanidae), in Oaxaca, Mexico.

PubMed

Rioja, Tamara; Carrillo-Reyes, Arturo; Espinoza-Medinilla, Eduardo; López-Mendoza, Sergio

2012-12-01

The Oaxacan Spiny-tailed Iguana Ctenosaura oaxacana is a restricted species to the Isthmus of Tehuantepec in Southern Oaxaca, Mexico. This reptile is one of the less known iguanid species. We census-tracked a population in the South ofNiltepec, Oaxaca, Mexico from May 2010 to April 2011. Throughout one year, a total of 10 line transects were situated and recorded in the study area to determine relative abundance and density, and habitat type use (dry forest, Nanchal, grassland, riparian vegetation, and mangrove) by the species. This study reports a new C. oaxacana population on the Southeastern limit of species range. Although this species has a very restricted distribution and is in danger of extinction, C. oaxacana has a high population density when compared to other Ctenosaura species. A total of 108 individuals were recorded throughout the study. Dry forest (33.75ind/ha) and Nanchal (18.75ind/ha) were the habitats with higher densities. Comparisons between habitat types showed no significant differences between dry forest and Nanchal (W=15, p=0.0808). Results between seasons were similar. The Oaxacan Spiny tailed Iguana preferred first the dry forest, and then Nanchal, while avoided grassland, riparian vegetation, and mangroves. There was no difference in habitat use between males and females. Mean perch heights were 1.23 +/- 0.32 (n=30) in Nanchal, 2.11 +/- 0.30 (n=9) in grassland, 1.90 +/- 0.56 (n=54) in dry forest, 1.91 +/- 0.28 (n=9) in mangrove and 2.30 +/- 0.37 (n=6) in riparian vegetation. Species observed as refuge and perch were B. crassifolia (Nanchal); C. alata (grassland); Tabebuia sp., Genipa americana, G. sepium, Acacia sp., Ficus sp. and Haematoxylon sp. (dry forest); G. sepium, Acacia sp. and Guazuma ulmifolia (riparian vegetation); and C. erecta (mangrove). Live trees hollows and branches were used by species. Main threats to the species are excessive hunting and habitat loss. Furthermore, grassland fires are still common in the study area during the dry season, which can result in habitat loss and territorial displacement of individuals.

New species of Lentulidae and Tettigoniidae (Orthoptera) from the Udzungwa Mountains, Tanzania.

PubMed

Hemp, Claudia

2017-02-02

A list of the Caelifera and Ensifera (Orthoptera) of lowland wet forest of the Udzungwa Mountains is presented. Five new species are described. These are the Agraeciini Afroagraecia mangula n. sp. (Conocephalinae), the Meconematinae Afrophisis undosa n. sp. and Phlugidia ampendiculata n. sp., the Phaneropterinae Eurycorypha pianofortis n. sp., and the lentulid Usambilla castigata n. sp. A total number of 19 Caelifera and 26 Tettigoniidea species are recorded. About one third of the species are endemic to the Udzungwa Mountains.

Impact of tree cutting on water-soluble organic compounds in podzolic soils of the European North-East

NASA Astrophysics Data System (ADS)

Lapteva, Elena; Bondarenko, Natalia; Shamrikova, Elena; Kubik, Olesya; Punegov, Vasili

2016-04-01

Water-soluble organic compounds (WOCs) and their single components, i.e. low-molecular organic acids, alcohols, and carbohydrates, attain a great deal of attention among soil scientists. WOCs are an important component of soil organic matter (SOM) and form as a results of different biological and chemical processes in soils. These processes are mainly responsible for formation and development of soils in aboveground ecosystems. The purpose of the work was identifying qualitative and quantitative composition of low-molecular organic substances which form in podzolic loamy soils against natural reforestation after spruce forest cutting. The studies were conducted on the territory of the European North-East of Russia, in the middle taiga subzone (Komi Republic, Ust-Kulom region). The study materials were soil of undisturbed bilberry spruce forest (Sample Plot 1 (SP1)) and soils of different-aged tree stands where cutting activities took place in winter 2001/2002 (SP2) and 1969/1970 (SP3). Description of soils and vegetation cover on the plots is given in [1]. Low-molecular organic compounds in soil water extracts were identified by the method of gas chromatography mass-spectrometry [2, 3]. Finally, reforestationafterspruceforestcutting was found to be accompanied by different changes in soil chemical composition. In contrast with soils under undisturbed spruce forest, organic soil horizons under different-aged cuts decreased in organic carbon reserves and production of low-molecular organic compounds, changed in soil acidity. Within the soil series of SP1→SP2→SP3, the highest content of WOCs was identified for undisturbed spruce forest (738 mg kg-1 soil). In soils of coniferous-deciduous forests on SP1 and SP3, WOC content was 294 and 441 mg kg-1 soil, correspondingly. Soils at cuts decreased in concentration of any water-soluble low-molecular SOM components as low-molecular acids, alcohols, and carbohydrates. Structure of low-molecular WOCs in the study podzolic soils was dominated by carbohydrates with ratio from 49% (SP1) to 63-66% (SP2, SP3) of total content of all identified compounds. The increase in relative content in carbohydrates observed for soils under cuts was possibly affected by vegetation cover change after clear-cutting and presence of birch and aspen leaves in plant waste composition (due to tree species change). At SP2 and SP3 cuts, content of alcohols and low-molecular carboxylic acids fell by almost twice as compared with SP1. Tree cuts changed not only in total content of water-soluble compounds but also in ratio of individual low-molecular compounds in water extracts composition. Totally, we identified 26 various compounds, including 12 low-molecular organic (carboxylic) acids, 10 carbohydrates, and 4 alcohols. Composition of carboxylic acids was dominated by aliphatic substituted acids (mainly 2-oxyacetic acid, 2-oxypropane, and 2,3-dioxypropane acids). Total number of aliphatic substituted acids, as well as aliphatic non-substituted and aromatic carboxylic acids, decreased in soils under cuts at initial reforestation stages (SP2). Content of all mentioned acids gradually rose with time (SP3). Soils under cut forests were observed for a decrease of erythrite ratio in composition of water-soluble alcohols (from 52 to 40% of total alcohols) and an increase of glycerin ratio (from 46 to 72%). 10 of identified mono- and disaccharides were dominated by mannose, galactopyranose, and D-ribose. Disturbed soils were identified for increased ratio of galactopyranose and D-ribose and for by almost twice as decreased ratio of mannose. References 1. Dymov, A. A. Changes in the organic matter of taiga soils during the natural reaforestation after cutting in the middle taigaof the Komi Republic / A. A. Dymov, E. Yu. Milanovskii // Eurasian Soil Science, 2013. Vol. 46. № 12. P. 1164-1171. 2. Shamrikova E.V., Punegov V.V., Gruzdev I.V., Vanchikova E.V., Vetoshkina A.A. Individual organic compounds in water extracts from podzolic soils of the Komi Republic // Eurasian Soil Science, 2012. T. 45. № 10. C. 939-946. 3. Shamrikova E.V., Gruzdev I.V., Punegov V.V., Khabibullina F.M., Kubik O.S. Water-soluble low-molecular-weight organic acids in automorphic loamy soils of the tundra and taiga zones // Eurasian Soil Science, 2013. T. 46.№ 6. C. 654-659.

Diversity and physiological characterization of D-xylose-fermenting yeasts isolated from the Brazilian Amazonian Forest.

PubMed

Cadete, Raquel M; Melo, Monaliza A; Dussán, Kelly J; Rodrigues, Rita C L B; Silva, Silvio S; Zilli, Jerri E; Vital, Marcos J S; Gomes, Fátima C O; Lachance, Marc-André; Rosa, Carlos A

2012-01-01

This study is the first to investigate the Brazilian Amazonian Forest to identify new D-xylose-fermenting yeasts that might potentially be used in the production of ethanol from sugarcane bagasse hemicellulosic hydrolysates. A total of 224 yeast strains were isolated from rotting wood samples collected in two Amazonian forest reserve sites. These samples were cultured in yeast nitrogen base (YNB)-D-xylose or YNB-xylan media. Candida tropicalis, Asterotremella humicola, Candida boidinii and Debaryomyces hansenii were the most frequently isolated yeasts. Among D-xylose-fermenting yeasts, six strains of Spathaspora passalidarum, two of Scheffersomyces stipitis, and representatives of five new species were identified. The new species included Candida amazonensis of the Scheffersomyces clade and Spathaspora sp. 1, Spathaspora sp. 2, Spathaspora sp. 3, and Candida sp. 1 of the Spathaspora clade. In fermentation assays using D-xylose (50 g/L) culture medium, S. passalidarum strains showed the highest ethanol yields (0.31 g/g to 0.37 g/g) and productivities (0.62 g/L · h to 0.75 g/L · h). Candida amazonensis exhibited a virtually complete D-xylose consumption and the highest xylitol yields (0.55 g/g to 0.59 g/g), with concentrations up to 25.2 g/L. The new Spathaspora species produced ethanol and/or xylitol in different concentrations as the main fermentation products. In sugarcane bagasse hemicellulosic fermentation assays, S. stipitis UFMG-XMD-15.2 generated the highest ethanol yield (0.34 g/g) and productivity (0.2 g/L · h), while the new species Spathaspora sp. 1 UFMG-XMD-16.2 and Spathaspora sp. 2 UFMG-XMD-23.2 were very good xylitol producers. This study demonstrates the promise of using new D-xylose-fermenting yeast strains from the Brazilian Amazonian Forest for ethanol or xylitol production from sugarcane bagasse hemicellulosic hydrolysates.

Three new spider species of the genus Pholcus from the Taihang Mountains of China (Araneae, Pholcidae)

PubMed Central

Zhang, Bao-Shi; Zhang, Feng; Liu, Jing-Ze

2016-01-01

Abstract In this study, three new species belonging to the genus Pholcus, collected from a forest of the Taihang Mountains, P. R. China, are described under the names of Pholcus papillatus sp. n. (male, female), Pholcus curvus sp. n. (male, female) and Pholcus auricularis sp. n. (male, female). PMID:27408600

Ectomycorrhizal fungal communities in endangered Pinus amamiana forests

PubMed Central

Kanetani, Seiichi; Nara, Kazuhide

2017-01-01

Interactions between trees and ectomycorrhizal (ECM) fungi are critical for the growth and survival of both partners. However, ECM symbiosis in endangered trees has hardly been explored, complicating conservation efforts. Here, we evaluated resident ECM roots and soil spore banks of ECM fungi from endangered Pinus amamiana forests on Yakushima and Tanegashima Islands, Kagoshima Prefecture, Japan. Soil samples were collected from remaining four forests in the two islands. The resident ECM roots in soil samples were subjected to molecular identification. Soil spore banks of ECM fungi were analyzed via bioassays using a range of host seedlings (P. amamiana, P. parviflora, P. densiflora and Castanopsis sieboldii) for 6–8 months. In all remaining P. amamiana forests, we discovered a new Rhizopogon species (Rhizopogon sp.1), the sequence of which has no match amoung numerous Rhizopogon sequences deposited in the international sequence database. Host identification of the resident ECM roots confirmed that Rhizopogon sp.1 was associated only with P. amamiana. Rhizopogon sp.1 was far more dominant in soil spore banks than in resident ECM roots, and its presence was confirmed in nearly all soil samples examined across the major remaining populations. While Rhizopogon sp.1 did not completely lose compatibility to other pine species, its infection rate in the bioassays was highest in the original host, P. amamiana, the performance of which was improved by the infection. These results indicate that Rhizopogon sp.1 is very likely to have a close ecological relationship with endangered P. amamiana, probably due to a long co-evolutionary period on isolated islands, and to play the key role in seedling establishment after disturbance. We may need to identify and utilize such key ECM fungi to conserve endangered trees practically. PMID:29261780

Three new species of Solanum (Brevantherum Clade) endemic to the Brazilian Atlantic Forest

PubMed Central

Giacomin, Leandro L.; Stehmann, João R.

2014-01-01

Abstract Three new Brazilian species of the Brevantherum clade of Solanum (Solanaceae) are described, all closely related to the poorly known Solanum inornatum Witasek. Solanum bradei Giacomin & Stehmann, sp. nov., and Solanum kriegeri Giacomin & Stehmann, sp. nov., differ from S. inornatum in having very small deltate calyx lobes that are not accrescent in fruit. Solanum bradei is a shrub up to 1.8 m with generally pedunculate inflorescences and tiny translucent fruits, whereas Solanum kriegeri is a dwarf glabrescent plant growing on sandy soils in cloud forests, with larger fruits and sessile to subsessile inflorescence. Solanum friburgense Giacomin & Stehmann, sp. nov., has linear calyx lobes like S. inornatum, and is characterized by its 2-foliate sympodia and leaf pubescence, with trichomes concentrated on leaf veins. The species here described and illustrated are restricted to the mountain ranges of Mantiqueira and Serra do Mar in the Atlantic forests of southeastern Brazil and are all of considerable conservation concern. PMID:25009438

Avian use of forest habitats in the Pembina Hills of northeastern North Dakota

USGS Publications Warehouse

Faanes, Craig A.; Andrew, Jonathan M.

1983-01-01

North Dakota has the least extensive total area of forested habitats of any of the 50 United States. Although occurring in limited area, forest communities add considerably to the total ecological diversity of the State. The forests of the Pembina Hills region in northeastern North Dakota are one of only three areas large enough to be considered of commercial value. During 1981 we studied the avifauna of the upper valley of the Pembina River in the Pembina Hills. Field work extended from 20 April to 23 July; breeding bird censuses were conducted 7 June to 2 July. Of the 120 bird species recorded during the study period, 79 species were recorded during the breeding season. The total breeding population was estimated at nearly 76,000 breeding pairs. The wood warblers (Parulidae) were the most numerous family, accounting for about 28,000 breeding pairs. The yellow warbler (Dendroica petechia) was the most abundant breeding species, making up 19.4% of the population. American redstart (Setophaga ruticilla) was second in abundance, accounting for 10.5% of the breeding population. Largest breeding densities occurred in the willow (Salix sp.) shrub community. Although supporting the lowest mean breeding density, quaking aspen (Populus tremuloides) forests supported the highest species diversity. First State breeding records were recorded for alder flycatcher (Empidonax alnorum) and golden-winged warbler (Vermivora chrysoptera). Records were obtained for 12 species considered rare or unusual in North Dakota during the breeding season. The status of all species known to have occurred in the study area is described in an annotated species list.

[Ecological affinity and current distribution of primates (Cebidae) in Campeche, Mexico].

PubMed

Navarro Fernández, Eloísa; Pozo de la Tijera, Carmen; Escobedo Cabrera, Enrique

2003-06-01

We carried out surveys realized field work from March to September 2000 to get the current distribution of Cebids in the state of Campeche, Mexico. Based on interviews and direct observations. We defined the distribution of Ateles geoffroyi yucatanensis and Alouatta pigra and we documented the first time localities where Allouata palliata is found in the state. We made distributional maps of each species using vegetation overlays from Inventario Nacional Forestal (Inv For) and each point documented during fieldwork. We presented the distribution of species according to confiability of the verified or expected data. Using the attributes table of Inv For, we calculated the areas of distribution which were 22,735 km2 for Alouatta sp. and 18,501 km2 for A. g. yucatanensis. We also presented the area occupied by each species according to vegetation types and the relative proportion of these vegetation types in the state. We confirmed the ability of Alouatta sp. to survive in disturbed environments produced by habitat fragmentation, and the affinity of A. g. yucatanesis to well preserved habitats.

Richness and Abundance of Ichneumonidae in a Fragmented Tropical Rain Forest.

PubMed

Ruiz-Guerra, B; Hanson, P; Guevara, R; Dirzo, R

2013-10-01

Because of the magnitude of land use currently occurring in tropical regions, the local loss of animal species due to habitat fragmentation has been widely studied, particularly in the case of vertebrates. Many invertebrate groups and the ichneumonid wasps in particular, however, have been poorly studied in this context, despite the fact that they are one of the most species-rich groups and play an important role as regulators of other insect populations. Here, we recorded the taxonomic composition of ichneumonid parasitoids and assessed their species richness, abundance, similarity, and dominance in the Los Tuxtlas tropical rain forest, Mexico. We compared two forest types: a continuous forest (640 ha) and a forest fragment (19 ha). We sampled ichneumonids using four malaise traps in both forest types during the dry (September-October) and rainy (March-April) seasons. A total of 104 individuals of Ichneumonidae belonging to 11 subfamilies, 18 genera, and 42 species were collected in the continuous forest and 11 subfamilies, 15 genera, and 24 species were collected in the forest fragment. Species richness, abundance, and diversity of ichneumonids were greater in the continuous forest than in the forest fragment. We did not detect differences between seasons. Species rank/abundance curves showed that the ichneumonid community between the forest types was different. Species similarity between forest types was low. The most dominant species in continuous forest was Neotheronia sp., whereas in the forest fragment, it was Orthocentrus sp. Changes in the ichneumonid wasp community may compromise important tropical ecosystem processes.

Uncovered Diversity of a Predominantly Andean Butterfly Clade in the Brazilian Atlantic Forest: a Revision of the Genus Praepedaliodes Forster (Lepidoptera: Nymphalidae, Satyrinae, Satyrini).

PubMed

Pyrcz, T W; Freitas, A V L; Boyer, P; Dias, F M S; Dolibaina, D R; Barbosa, E P; Magaldi, L M; Mielke, O H H; Casagrande, M M; Lorenc-Brudecka, J

2018-04-01

The genus Praepedaliodes Forster, 1964, the only representative of the mega-diverse mostly Andean Pedaliodes complex lineage in the Brazilian Atlantic Forest, is revised. Prior to this study, four species were known, P. phanias (Hewitson, 1862), P. granulata (Butler, 1868), P. amussis (Thieme, 1905) and P. exul (Thieme, 1905). Here, a further six are described, all from SE Brazil, expanding to 10 the number of species in this genus. Lectotypes are designated for P. phanias, P. granulata and P. amussis. The genus is most diverse in the Serra da Mantiqueira (São Paulo, Rio de Janeiro, Minas Gerais) and in the Serra Geral (Paraná, Santa Catarina) with seven species occurring in both ranges. Praepedaliodes phanias is the most widespread species and the only one found in the western part of the Atlantic Forest; only this species and P. duartei Dias, Dolibaina & Pyrcz n. sp. occurring to near sea level. Other species, P. zaccae Dolibaina, Dias & Pyrcz n. sp., P. francinii Freitas & Pyrcz n. sp., P. sequeirae Pyrcz, Dias & Dolbaina n. sp., P. landryi Pyrcz & Freitas n. sp. and P. pawlaki Pyrcz & Boyer n. sp. are strictly montane and the highest species richness is reached at 1400-1800 m. One species, P. sequeirae n. sp., is a narrow endemic found only at timberline in the Agulhas Negras massif above 2300 m. Immature stages are described for two species, P. phanias and P. landryi n. sp. Molecular data (barcode region of cytochrome oxidase, subunit I) and adult morphology, including male and female genitalia, support the genus as monophyletic, belonging to a predominantly Andean clade of the Pedaliodes Butler, 1867 complex. Morphological evidences, in particular female genitalia comparative analysis, indicate the genera Physcopedaliodes Forster, 1964 and Panyapedaliodes Forster, 1964 as possibly the closest relatives to Praepedaliodes. Molecular data are inconclusive in this respect.

Phlebotomine sandflies (Diptera: Psychodidae) from Lábrea, state of Amazonas, Brazil, with a description of Evandromyia (Aldamyia) apurinan Shimabukuro, Figueira & Silva, sp. nov.

PubMed Central

Figueira, Elder Augusto Guimarães; Silva, Glacicleide; Chagas, Érica Cristina da Silva; Shimabukuro, Paloma Helena Fernandes

2013-01-01

An entomological survey was conducted from July-December 2009 and September-December 2010, as part of the epidemiological monitoring of American cutaneous leishmaniasis (ACL) in the municipality of Lábrea, state of Amazonas (AM), Brazil. Sandflies were collected using CDC light traps installed in intra and peridomiciliary locations, as well as the border of forested areas around houses where autochthonous cases of ACL were recorded. A total of 510 sandflies belonging to 26 species were collected. The most abundant species was Nyssomyia antunesi (44.5%) followed by Evandromyia walkeri (10.6%) and Micropygomyia rorotaensis (9.8%). Here we also describe Evandromyia (Aldamyia) apurinan sp. nov. and report new records for Trichophoromyia flochi and Evandromyia sipani in AM and Brazil, respectively. Our results describe the composition of the sandfly fauna in the south of AM and suggest Ny. antunesi as the putative vector in the transmission of Leishmania in this area of the Amazon Region. PMID:23778658

Phlebotomine sandflies (Diptera: Psychodidae) from Lábrea, state of Amazonas, Brazil, with a description of Evandromyia (Aldamyia) apurinan Shimabukuro, Figueira & Silva, sp. nov.

PubMed

Figueira, Elder Augusto Guimarães; Silva, Glacicleide; Chagas, Erica Cristina da Silva; Shimabukuro, Paloma Helena Fernandes

2013-05-01

An entomological survey was conducted from July-December 2009 and September-December 2010, as part of the epidemiological monitoring of American cutaneous leishmaniasis (ACL) in the municipality of Lábrea, state of Amazonas (AM), Brazil. Sandflies were collected using CDC light traps installed in intra and peridomiciliary locations, as well as the border of forested areas around houses where autochthonous cases of ACL were recorded. A total of 510 sandflies belonging to 26 species were collected. The most abundant species was Nyssomyia antunesi (44.5%) followed by Evandromyia walkeri (10.6%) and Micropygomyia rorotaensis (9.8%). Here we also describe Evandromyia (Aldamyia) apurinan sp. nov. and report new records for Trichophoromyia flochi and Evandromyia sipani in AM and Brazil, respectively. Our results describe the composition of the sandfly fauna in the south of AM and suggest Ny. antunesi as the putative vector in the transmission of Leishmania in this area of the Amazon Region.

Back-trajectories show export of airborne fungal spores (Ganoderma sp.) from forests to agricultural and urban areas in England

NASA Astrophysics Data System (ADS)

Sadyś, M.; Skjøth, C. A.; Kennedy, R.

2014-02-01

We propose here the hypothesis that all of United Kingdom (UK) is likely to be affected by Ganoderma sp. spores, an important plant pathogen. We suggest that the main sources of this pathogen, which acts as a bioaerosol, are the widely scattered woodlands in the country, although remote sources must not be neglected. The hypothesis is based on related studies on bioaerosols and supported by new observations from a non-forest site and model calculations to support our hypothesis.

Rickettsial agents in avian ixodid ticks in northeast Brazil.

PubMed

Lugarini, Camile; Martins, Thiago Fernandes; Ogrzewalska, Maria; de Vasconcelos, Nathália Costa Teixeira; Ellis, Vincenzo A; de Oliveira, Jaqueline Bianque; Pinter, Adriano; Labruna, Marcelo B; Silva, Jean Carlos Ramos

2015-04-01

Birds are important in the maintenance and spread of ticks and tick-borne diseases. In this context we screened birds in the Atlantic forest north of the São Francisco River and Caatinga in northeast Brazil. In the Atlantic forest Amblyomma longirostre, Amblyomma nodosum, Amblyomma varium and Amblyomma auricularium were identified. A. longirostre was infected by "Candidatus Rickettsia amblyommii" and A. nodosum by a Rickettsia parkeri-like agent. In Caatinga, Amblyomma parvum and A. auricularium were identified. A. auricularium was infected by "Ca. R. amblyommii" and Rickettsia bellii. "Canditatus Rickettsia andenae" was also identified in A. parvum collected from birds in Caatinga. In addition, Rickettsia sp. genotype AL was identified in A. varium collected on the clothes of the field team in one area of Atlantic forest. Here we provide a series of new host records for several Neotropical Amblyomma species and document rickettsial infections of "Ca. R. amblyomii" and a R. parkeri-like agent in Paraíba State, and R. bellii and "Ca. R. andenae" in Bahia State. For the first time we provide information regarding the infection of A. varium by "Ca. R. amblyommii". Copyright © 2015 Elsevier GmbH. All rights reserved.

Revision of the Middle American clade of the ant genus Stenamma Westwood (Hymenoptera, Formicidae, Myrmicinae)

PubMed Central

Branstetter, Michael G.

2013-01-01

Abstract Stenamma is a cryptic “leaf-litter” ant genus that occurs in mesic forest habitats throughout the Holarctic region, Central America, and part of northwestern South America (Colombia and Ecuador). The genus was thought to be restricted primarily to the temperate zone, but recent collecting efforts have uncovered a large radiation of Neotropical forms, which rival the Holarctic species in terms of morphological and behavioral diversity. By inferring a broad-scale molecular phylogeny of Stenamma, Branstetter (2012) showed that all Neotropical species belong to a diverse Middle American clade (MAC), and that this clade is sister to an almost completely geographically separated Holarctic clade (HOC). Here, the Middle American clade of Stenamma is revised to recognize 40 species, of which 33 are described as new. Included in the revision are a key to species based on the worker caste, and for each species where possible, descriptions and images of workers and queens, images of males, information on geographic distribution, descriptions of intraspecific variation, and notes on natural history. Several species groups are defined, but the majority of species remain unassigned due to a lack of diagnostic morphological character states for most molecular clades. The following species are redescribed: Stenamma alas Longino, Stenamma diversum Mann, Stenamma expolitum Smith, Stenamma felixi Mann, Stenamma huachucanum Smith, Stenamma manni Wheeler, and Stenamma schmidti Menozzi. The following are described as new: Stenamma andersoni sp. n., Stenamma atribellum sp. n., Stenamma brujita sp. n., Stenamma callipygium sp. n., Stenamma catracho sp. n., Stenamma connectum sp. n., Stenamma crypticum sp. n., Stenamma cusuco sp. n., Stenamma excisum sp. n., Stenamma expolitico sp. n., Stenamma hojarasca sp. n., Stenamma ignotum sp. n., Stenamma lagunum sp. n., Stenamma llama sp. n., Stenamma leptospinum sp. n., Stenamma lobinodus sp. n., Stenamma longinoi sp. n., Stenamma maximon sp. n., Stenamma megamanni sp. n., Stenamma monstrosum sp. n., Stenamma muralla sp. n., Stenamma nanozoi sp. n., Stenamma nonotch sp. n., Stenamma ochrocnemis sp. n., Stenamma pelophilum sp. n., Stenamma picopicucha sp. n., Stenamma saenzae sp. n., Stenamma sandinista sp. n., Stenamma stictosomum sp. n., Stenamma tiburon sp. n., Stenamma tico sp. n., Stenamma vexator sp. n., and Stenamma zelum sp. n. Although many of the newly defined species consist of challenging species complexes, this study establishes a robust baseline that will guide future work on the systematics of MAC Stenamma. The total global diversity of Stenamma now includes 84 extant species. PMID:23794874

A new treefrog (Hylidae: Litoria) from Kroombit Tops, east Australia, and an assessment of conservation status.

PubMed

Hoskin, Conrad J; Hines, Harry B; Meyer, Ed; Clarke, John; Cunningham, Michael

2013-01-01

The Litoria phyllochroa species-group are small hylid frogs that occur in wet forests of south-east Australia. This group has had a long history of taxonomic confusion and has received little attention in the last decade. A population of this species-group at Kroombit Tops, several hundred kilometers north of all other populations, has been recognised for some time as being genetically highly distinct. Here we describe this population as a new species, L. kroombitensis sp. nov. This species is most similar to L. barringtonensis and L. pearsoniana but is readily distinguished based on differences in morphology, colour pattern, mating call and genetics. Litoria kroombitensis sp. nov. is restricted to Kroombit Tops, an isolated area of wet forest in south-east Queensland. The species inhabits slow and intermittently flowing streams in rainforest and adjoining wet sclerophyll forest. The tadpole of L. kroombitensis sp. nov., described herein, is similar in morphology and behaviour to the tadpoles of other species within the Litoria phyllochroa species-group, in particular L. pearsoniana. Li toria kroombitensis sp. nov. has a very small distribution, with all records coming from the headwaters of five streams, Extensive surveys since the mid-1990s have revealed population declines, attributable to amphibian chytrid fungus (Batrachochytrium dendrobatidis). Other threats include degradation of riparian habitat due to invasive weeds, feral pigs and livestock, and fire. Further, the extent of wet forest habitats at Kroombit Tops is likely to be reduced by climate change impacts. Litoria kroombitensis sp. nov. meets IUCN Red List criteria for critically endangered CR B lab (i-v) due to its small geographic range, naturally fragmented distribution, and observed and projected decline in populations. In this paper we also assess the validity of the names L. barringtonensis, L. pearsoniana and L. piperata. We conclude that the names L. barringtonensis and L. pearsoniana are valid but the validity of L. piperata requires further investigation.

[Diversity of Hemiptera Auchenorrhyncha in citrus, coffee and a fragment of native forest of the state of São Paulo].

PubMed

Giustolin, Teresinha A; Lopes, João R S; Querino, Ranyse B; Cavichioli, Rodney R; Zanol, Kety; Azevedo Filho, Wilson S; Mendes, Miguel A

2009-01-01

The population of Hemiptera Auchenorrhyncha was studied in sweet citrus groves (Citrus sinensis), coffee plantations (Coffea arabica) and a semi-deciduous seasonal forest with shrub physiognomy in Bebedouro, SP, to evaluate the influence of the natural ecosystem on the species composition of the agroecosystems. Monitoring was carried out by using yellow stick cards, which were replaced every 15 days and all Auchenorrhyncha collected were counted and identified. Seven families, 11 subfamilies and 98 species were collected, with Cicadellidae being the most abundant. The native forest presented larger wealth, diversity and equitability of Auchenorrhyncha species, demonstrating to be more stable than the other habitats. The high values of similarities obtained between the agroecosystems and the forest demonstrated that great part of Auchenorrhyncha species occurring in the agricultural habitats was also occurring at the forest, indicating that the last may serve as reservoir of species. The abundance of the taxonomic groups of Auchenorrhyncha collected varied with the evaluated habitats, with Proconiini being the most abundant in the coffee plantation next to the forest, Athysanini, Scaphytopiini, Neocoelidiinae and Coelidiinae in the orange orchard and coffee plantation distant from the forest; Cicadellinae and Agalliinae were not related to any of the habitats. The presence of vector insects and possible vectors of plant diseases in the appraised habitats indicate the need of the implementation of strategies for landscape management.

Studies of Madagascan Ptiliidae (Coleoptera) 4: The genus Bambara including eight new species and the first account of blindness and aptery in the genus .

PubMed

Darby, Michael

2014-12-15

This is the fourth report detailing Ptiliidae collected from forest litter by the Moravian Museum (Brno, Czech Republic) expeditions to Madagascar 2010-2013. Eight new species are described and figured: B. edwardi sp. n.; B. lanquidula sp. n.; B. merina sp.n.; B. opaca sp. n.; B. problematica sp. n.; B. secubita sp. n.; B. thomasi sp. n. and B. verecunda sp. n., and new data recorded for  B. dybasi Johnson. Problems concerning the genital morphology and species determination of the parthenogenetic members of the genus are discussed in relation to the findings, and the first blind and apterous species reported.A key to the known species from the island is provided.

Candida alocasiicola sp. nov., Candida hainanensis sp. nov., Candida heveicola sp. nov. and Candida musiphila sp. nov., novel anamorphic, ascomycetous yeast species isolated from plants.

PubMed

Wang, Shi-An; Jia, Jian-Hua; Bai, Feng-Yan

2008-08-01

In a taxonomic study on the ascomycetous yeasts isolated from plant materials collected in tropical forests in Yunnan and Hainan Provinces, southern China, four strains isolated from tree sap (YJ2E(T)) and flowers (YF9E(T), YWZH3C(T) and YYF2A(T)) were revealed to represent four undescribed yeast species. Molecular phylogenetic analysis based on the large subunit (26S) rRNA gene D1/D2 domain sequences showed that strain YJ2E(T) was located in a clade together with Candida haemulonii and C. pseudohaemulonii. Strain YF9E(T) was most closely related to C. azyma and strain YWZH3C(T) to C. sorbophila and C. spandovensis. Strain YYF2A(T) was clustered in a clade containing small-spored Metschnikowia species and related anamorphic Candida species. The new strains differed from their closely related described species by more than 10% mismatches in the D1/D2 domain. No sexual states were observed for the four strains on various sporulation media. The new species are therefore assigned to the genus Candida and described as Candida alocasiicola sp. nov. (type strain, YF9E(T) = AS 2.3484(T) = CBS 10702(T)), Candida hainanensis sp. nov. (type strain, YYF2A(T) = AS 2.3478(T) = CBS 10696(T)), Candida heveicola sp. nov. (type strain, YJ2E(T) = AS 2.3483(T) = CBS 10701(T)) and Candida musiphila sp. nov. (type strain, YWZH3C(T) = AS 2.3479(T) = CBS 10697(T)).

Torulaspora quercuum sp. nov. and Candida pseudohumilis sp. nov., novel yeasts from human and forest habitats.

PubMed

Wang, Qi-Ming; Xu, Jianping; Wang, Huamin; Li, Juan; Bai, Feng-Yan

2009-12-01

Strains XZ-46A, XZ-105, XZ-129 and XZ-281(T) isolated from the oral cavities of healthy Tibetan volunteers were revealed to represent two novel ascomycetous yeast species by molecular taxonomic characterizations. Strain XZ-281(T) was most closely related to Candida humilis, but differed from the type strain of the species by eight (1.2%) substitutions in the 26S rRNA gene D1/D2 domain and by >100 (>20%) mismatches in the internal transcribed spacer (ITS) region. Strains XZ-46A, XZ-105 and XZ-129 had identical or similar D1/D2 and ITS sequences with each other and with strain 17YF(T) isolated from a leaf of an oak tree (Quercus sp.). The closest relative of this group was Torulaspora microellipsoides. They differed from the type strain of the species by five (0.9%) substitutions in the D1/D2 domain and >70 (>15%) mismatches in the ITS region. A sexual state was observed in strain 17YF(T), but not in the other four oral strains. An anamorphic name Candida pseudohumilis sp. nov. is proposed for strain XZ-281(T) (=AS 2.3956(T)=CBS 11404(T)) and a teleomorphic name Torulaspora quercuum sp. nov. is proposed for strain 17YF(T) (=AS 2.3768(T)=CBS 11403(T)) and the other three oral strains.

The effect of habitat disturbance on the abundance of nocturnal lemur species on the Masoala Peninsula, northeastern Madagascar.

PubMed

Sawyer, Rachel Mary; Fenosoa, Zo Samuel Ella; Andrianarimisa, Aristide; Donati, Giuseppe

2017-01-01

Madagascar is one of the world's biodiversity hotspots. The island's past and current rates of deforestation and habitat disturbance threaten its plethora of endemic biodiversity. On Madagascar, tavy (slash and burn agriculture), land conversion for rice cultivation, illegal hardwood logging and bushmeat hunting are the major contributors to habitat disturbance. Understanding species-specific responses to habitat disturbance across different habitat types is crucial when designing conservation strategies. We surveyed three nocturnal lemur species in four forest types of varying habitat disturbance on the Masoala Peninsula, northeastern Madagascar. We present here updated abundance and density estimates for the Endangered Avahi mooreorum and Lepilemur scottorum, and Microcebus sp. Distance sampling surveys were conducted on 11 transects, covering a total of 33 km after repeated transect walks. We collected data on tree height, bole height, diameter at breast height, canopy cover and tree density using point-quarter sampling to characterise the four forest types (primary lowland, primary littoral, selectively logged and agricultural mosaic). Median encounter rates by forest type ranged from 1 to 1.5 individuals (ind.)/km (Microcebus sp.), 0-1 ind./km (A. mooreorum) and 0-1 ind./km (L. scottorum). Species density estimates were calculated at 232.31 ind./km 2 (Microcebus sp.) and 121.21 ind./km 2 (A. mooreorum), while no density estimate is provided for L. scottorum due to a small sample size. Microcebus sp. was most tolerant to habitat disturbance, exhibiting no significant effect of forest type on abundance. Its small body size, omnivorous diet and generalised locomotion appear to allow it to tolerate a variety of habitat disturbance. Both A. mooreorum and L. scottorum showed significant effects of forest type on their respective abundance. This study suggests that the specialist locomotion and diet of A. mooreorum and L. scottorum make them susceptible to the effects of increasing habitat disturbance.

The microbial community in decaying fallen logs varies with critical period in an alpine forest.

PubMed

Chang, Chenhui; Wu, Fuzhong; Yang, Wanqin; Xu, Zhenfeng; Cao, Rui; He, Wei; Tan, Bo; Justine, Meta Francis

2017-01-01

Little information has been available on the shifts in the microbial community in decaying fallen logs during critical periods in cold forests. Minjiang fir (Abies faxoniana) fallen logs in decay classes I-V were in situ incubated on the forest floor of an alpine forest in the eastern Tibet Plateau. The microbial community was investigated during the seasonal snow cover period (SP), snow thawing period (TP), early growing season (EG) and late growing season (LG) using Phosphorous Lipid Fatty Acid (PLFA) analysis. Total microbial biomass and microbial diversity in fallen logs were much more affected by critical period than decay class, whereas decay class had a stronger effect on microbial diversity than on microbial biomass. Abundant microbial biomass and microbial diversity in logs even without the cover of snow were observed in winter, which could not be linked to thermal insulation by snow cover. The freshly decayed logs functioned as an excellent buffer of environmental variation for microbial organisms during the sharp fluctuations in temperature in winter. We also found distinct decay patterns along with seasonality for heartwood, sapwood and bark, which requires further detailed research. Gram- bacteria mainly dominated the shifts in microbial community composition from SP to EG, while fungi and Gram+ bacteria mainly dominated it from SP to TP. Based on previous work and the present study, we conclude that fallen logs on the forest floor alter ecological processes by influencing microbial communities on woody debris and beneath the soil and litter. Our study also emphasizes the need to maintain a number of fallen logs, especially fresh ones, on the forest floor.

A new species of karst forest Bent-toed Gecko (genus Cyrtodactylus Gray) not yet threatened by foreign cement companies and a summary of Peninsular Malaysia's endemic karst forest herpetofauna and the need for its conservation.

PubMed

Grismer, L Lee; Wood, P L Jr; Anuar, Shahrul; Davis, H R; Cobos, A J; Murdoch, M L

2016-01-04

A new species of Bent-toed Gecko, Cyrtodactylus gunungsenyumensis sp. nov. of the sworderi complex, is described from Hutan Lipur Gunung Senyum, Pahang, Peninsular Malaysia and is differentiated from all other species in the sworderi complex by having a unique combination of characters including a maximum SVL of 74.7 mm; low, rounded, weakly keeled, body tubercles; 34-40 paravertebral tubercles; weak ventrolateral body fold lacking tubercles; 38-41 ventral scales; an abrupt transition between the posterior and ventral femoral scales; 20-23 subdigital lamellae on the fourth toe; enlarged femoral scales; no femoral or precloacal pores; no precloacal groove; wide caudal bands; and an evenly banded dorsal pattern. Cyrtodactylus gunungsenyumensis sp. nov. is a scansorial, karst forest-adapted specialist endemic to the karst ecosystem surrounding Gunung Senyum and occurs on the vertical walls of the limestone towers as well as the branches, trunks, and leaves of the vegetation in the associated karst forest. Cyrtodactylus gunungsenyumensis sp. nov. is the seventh species of karst forest-adapted Cyrtodactylus and the sixteenth endemic species of karst ecosystem reptile discovered in Peninsular Malaysia in the last seven years from only 12 different karst forests. This is a clear indication that many species remain to be discovered in the approximately 558 isolated karst ecosystems in Peninsular Malaysia not yet surveyed. These data continue to underscore the importance of karst ecosystems as reservoirs of biodiversity and microendemism and that they constitute an important component of Peninsular Malaysia's natural heritage and should be protected from the quarrying interests of foreign industrial companies.

The microbial community in decaying fallen logs varies with critical period in an alpine forest

PubMed Central

Chang, Chenhui; Wu, Fuzhong; Xu, Zhenfeng; Cao, Rui; He, Wei; Tan, Bo; Justine, Meta Francis

2017-01-01

Little information has been available on the shifts in the microbial community in decaying fallen logs during critical periods in cold forests. Minjiang fir (Abies faxoniana) fallen logs in decay classes I-V were in situ incubated on the forest floor of an alpine forest in the eastern Tibet Plateau. The microbial community was investigated during the seasonal snow cover period (SP), snow thawing period (TP), early growing season (EG) and late growing season (LG) using Phosphorous Lipid Fatty Acid (PLFA) analysis. Total microbial biomass and microbial diversity in fallen logs were much more affected by critical period than decay class, whereas decay class had a stronger effect on microbial diversity than on microbial biomass. Abundant microbial biomass and microbial diversity in logs even without the cover of snow were observed in winter, which could not be linked to thermal insulation by snow cover. The freshly decayed logs functioned as an excellent buffer of environmental variation for microbial organisms during the sharp fluctuations in temperature in winter. We also found distinct decay patterns along with seasonality for heartwood, sapwood and bark, which requires further detailed research. Gram- bacteria mainly dominated the shifts in microbial community composition from SP to EG, while fungi and Gram+ bacteria mainly dominated it from SP to TP. Based on previous work and the present study, we conclude that fallen logs on the forest floor alter ecological processes by influencing microbial communities on woody debris and beneath the soil and litter. Our study also emphasizes the need to maintain a number of fallen logs, especially fresh ones, on the forest floor. PMID:28787465

A diminutive new species of cave-dwelling Wolf Snake (Colubridae: Lycodon Boie, 1826) from Peninsular Malaysia.

PubMed

Grismer, L Lee; Quah, Evan S H; Anuar M S, Shahrul; Muin, Mohd Abdul; Wood, Perry L; Nor, Siti Azizah Mohd

2014-06-12

A newly discovered, diminutive, cave-dwelling, lowland species of the colubrid snake genus Lycodon Boie is described from a limestone cave along the Thai-Malaysian border in the state of Perlis, northwestern Peninsular Malaysia. Lycodon cavernicolus sp. nov. is most closely related to L. butleri Boulenger, an endemic, upland, forest-dwelling species from Peninsular Malaysia of the fasciatus group but is separated from L. butleri and all other species of the L. fasciatus group and the closely related L. ruhstrati group by having the combination of 245 (male) and 232 (female) ventral scales; 113 (male) and 92 (female) paired, subcaudal scales; a single precloacal plate; nine or 10 supralabials; 10 or 11 infralabials; a maximum total length of 508 mm (female); a relative tail length of 0.25-0.27; an immaculate venter in juveniles and dark-brown, posterior, ventral scale margins in adults; and dorsal and caudal bands in juveniles white. The discovery of L. cavernicolus sp. nov. adds to a rapidly growing list of newly discovered reptiles from karst regions and limestone forests of Peninsular Malaysia, underscoring the fact that these areas should be studied before they are quarried as they harbor a significant portion of the Peninsular Malaysia's herpetological diversity.

Biosynthetic potential of actinomycetes in brown forest soil on the eastern coast of the aegean sea

NASA Astrophysics Data System (ADS)

Shirokikh, I. G.; Shirokikh, A. A.

2017-11-01

The taxonomic and functional structures of the actinomycetal complex in the litter and upper horizon of the brown forest soil was studied in a Pinus brutia var. pendulifolia forest on the eastern coast of the Aegean Sea. The complex of actinomycetes included representatives of the Streptomyces and Micromonospora genera and oligosporus forms. Streptomycetes predominated (73.8%) in the soil, and micromonospores (66.7%) were dominants in the litter. Thirty isolates of ten Streptomyces species from five series and three sections prevailed. In the upper soil horizon, species of the Helvolo-Flavus Helvolus section predominated (48%); the S. felleus species occurred most frequently. Among the isolated cultures, the S. globisporus and S. sindenensis species capable to produce antitumor antibiotics were found. The testing of the antimicrobial activity of the natural isolates showed that five strains inhibit the growth of pathogenic Fusarium sp., Alternaria sp., Acremonium sp., and Bipolaris sorokiniana fungi. When testing the effect of streptomycetes on the production of cellulases, a high-efficient strain belonging to the S. noboritoensis species was revealed. All the streptomycetes isolated from the brown forest soil produced auxins at the rate of 7.8 to 19.7 μg of indole acetic acid/mL of the liquid medium in the presence of 200 mg/L of tryptophan. Twelve isolates of streptomycetes were transferred to the collection of biotechnologically promising cultures for studying their properties.

Tisaniba, a new genus of marpissoid jumping spiders from Borneo (Araneae: Salticidae).

PubMed

Zhang, Jun-Xia; Maddison, Wayne P

2014-08-14

Six new species of marpissoid jumping spiders from Sarawak, Borneo, are described in the new genus Tisaniba Zhang & Maddison. They are the type species, T. mulu Zhang & Maddison sp. nov., as well as the species T. bijibijan Zhang & Maddison sp. nov., T. dik Zhang & Maddison sp. nov., T. kubah Zhang & Maddison sp. nov., T. selan Zhang & Maddison sp. nov., and T. selasi Zhang & Maddison sp. nov. The spiders are small and brown to black, living in leaf litter in the tropical forest. Phylogenetic analyses based on 28s and 16sND1 genes indicate that they are a distinctive group within the marpissoids. Diagnostic illustrations and photographs of living spiders are provided for all species.

Leaf litter copepods from a cloud forest mountain top in Honduras (Copepoda: Cyclopidae, Canthocamptidae).

PubMed

Fiers, Frank; Jocque, Merlijn

2013-01-01

Five different species of Copepoda were extracted from a leaf litter sample collected on the top (at 2000 m a.s.l.) of a cloud forested mountain in El Cusuco National Park, Honduras. Three of them, one Cyclopidae and two Canthocamptidae are new to science, and are described herein. Olmeccyclops hondo sp. nov. is the second representative thus far known of this New World genus. Moraria catracha sp. nov. and Moraria cusuca sp. nov. are the first formally described members of the genus occurring in Central America. The concept of a "Moraria-group" is considered to be an artificial grouping and is limited here to the genera Moraria and Morariopsis only. The distributional range of this group is essentially Holarctic, with the mountainous regions in Honduras, and probably in west Nicaragua, as the southernmost limits in the New World.

AmeriFlux US-SP3 Slashpine-Donaldson-mid-rot- 12yrs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Martin, Tim

2016-01-01

This is the AmeriFlux version of the carbon flux data for the site US-SP3 Slashpine-Donaldson-mid-rot- 12yrs. Site Description - Slash pine planted end of 1989 early 1990. Gholz and Clark, 2002. Agric. Forest Meteo. 112, 87 - 102; Ckark et al., 2004. Ecological Applications, 14, 1154 - 1171.

Production of Alkaline Cellulase by Fungi Isolated from an Undisturbed Rain Forest of Peru

PubMed Central

Vega, Karin; Villena, Gretty K.; Sarmiento, Victor H.; Ludeña, Yvette; Vera, Nadia; Gutiérrez-Correa, Marcel

2012-01-01

Alkaline cellulase producing fungi were isolated from soils of an undisturbed rain forest of Peru. The soil dilution plate method was used for the enumeration and isolation of fast growing cellulolytic fungi on an enriched selective medium. Eleven out of 50 different morphological colonies were finally selected by using the plate clearing assay with CMC as substrate at different pH values. All 11 strains produced cellulases in liquid culture with activities at alkaline pH values without an apparent decrease of them indicating that they are true alkaline cellulase producers. Aspergillus sp. LM-HP32, Penicillium sp. LM-HP33, and Penicillium sp. LM-HP37 were the best producers of FP cellulase (>3 U mL−1) with higher specific productivities (>30 U g−1 h−1). Three strains have been found suitable for developing processes for alkaline cellulase production. Soils from Amazonian rain forests are good sources of industrial fungi with particular characteristics. The results of the present study are of commercial and biological interest. Alkaline cellulases may be used in the polishing and washing of denim processing of the textile industry. PMID:23213539

Fungal Planet description sheets: 281-319.

PubMed

Crous, P W; Wingfield, M J; Schumacher, R K; Summerell, B A; Giraldo, A; Gené, J; Guarro, J; Wanasinghe, D N; Hyde, K D; Camporesi, E; Gareth Jones, E B; Thambugala, K M; Malysheva, E F; Malysheva, V F; Acharya, K; Álvarez, J; Alvarado, P; Assefa, A; Barnes, C W; Bartlett, J S; Blanchette, R A; Burgess, T I; Carlavilla, J R; Coetzee, M P A; Damm, U; Decock, C A; den Breeÿen, A; de Vries, B; Dutta, A K; Holdom, D G; Rooney-Latham, S; Manjón, J L; Marincowitz, S; Mirabolfathy, M; Moreno, G; Nakashima, C; Papizadeh, M; Shahzadeh Fazeli, S A; Amoozegar, M A; Romberg, M K; Shivas, R G; Stalpers, J A; Stielow, B; Stukely, M J C; Swart, W J; Tan, Y P; van der Bank, M; Wood, A R; Zhang, Y; Groenewald, J Z

2014-12-01

Novel species of fungi described in the present study include the following from South Africa: Alanphillipsia aloeicola from Aloe sp., Arxiella dolichandrae from Dolichandra unguiscati, Ganoderma austroafricanum from Jacaranda mimosifolia, Phacidiella podocarpi and Phaeosphaeria podocarpi from Podocarpus latifolius, Phyllosticta mimusopisicola from Mimusops zeyheri and Sphaerulina pelargonii from Pelargonium sp. Furthermore, Barssia maroccana is described from Cedrus atlantica (Morocco), Codinaea pini from Pinus patula (Uganda), Crucellisporiopsis marquesiae from Marquesia acuminata (Zambia), Dinemasporium ipomoeae from Ipomoea pes-caprae (Vietnam), Diaporthe phragmitis from Phragmites australis (China), Marasmius vladimirii from leaf litter (India), Melanconium hedericola from Hedera helix (Spain), Pluteus albotomentosus and Pluteus extremiorientalis from a mixed forest (Russia), Rachicladosporium eucalypti from Eucalyptus globulus (Ethiopia), Sistotrema epiphyllum from dead leaves of Fagus sylvatica in a forest (The Netherlands), Stagonospora chrysopyla from Scirpus microcarpus (USA) and Trichomerium dioscoreae from Dioscorea sp. (Japan). Novel species from Australia include: Corynespora endiandrae from Endiandra introrsa, Gonatophragmium triuniae from Triunia youngiana, Penicillium coccotrypicola from Archontophoenix cunninghamiana and Phytophthora moyootj from soil. Novelties from Iran include Neocamarosporium chichastianum from soil and Seimatosporium pistaciae from Pistacia vera. Xenosonderhenia eucalypti and Zasmidium eucalyptigenum are newly described from Eucalyptus urophylla in Indonesia. Diaporthe acaciarum and Roussoella acacia are newly described from Acacia tortilis in Tanzania. New species from Italy include Comoclathris spartii from Spartium junceum and Phoma tamaricicola from Tamarix gallica. Novel genera include (Ascomycetes): Acremoniopsis from forest soil and Collarina from water sediments (Spain), Phellinocrescentia from a Phellinus sp. (French Guiana), Neobambusicola from Strelitzia nicolai (South Africa), Neocladophialophora from Quercus robur (Germany), Neophysalospora from Corymbia henryi (Mozambique) and Xenophaeosphaeria from Grewia sp. (Tanzania). Morphological and culture characteristics along with ITS DNA barcodes are provided for all taxa.

Novel Glucose-1-Phosphatase with High Phytase Activity and Unusual Metal Ion Activation from Soil Bacterium Pantoea sp. Strain 3.5.1.

PubMed

Suleimanova, Aliya D; Beinhauer, Astrid; Valeeva, Liia R; Chastukhina, Inna B; Balaban, Nelly P; Shakirov, Eugene V; Greiner, Ralf; Sharipova, Margarita R

2015-10-01

Phosphorus is an important macronutrient, but its availability in soil is limited. Many soil microorganisms improve the bioavailability of phosphate by releasing it from various organic compounds, including phytate. To investigate the diversity of phytate-hydrolyzing bacteria in soil, we sampled soils of various ecological habitats, including forest, private homesteads, large agricultural complexes, and urban landscapes. Bacterial isolate Pantoea sp. strain 3.5.1 with the highest level of phytase activity was isolated from forest soil and investigated further. The Pantoea sp. 3.5.1 agpP gene encoding a novel glucose-1-phosphatase with high phytase activity was identified, and the corresponding protein was purified to apparent homogeneity, sequenced by mass spectroscopy, and biochemically characterized. The AgpP enzyme exhibits maximum activity and stability at pH 4.5 and at 37°C. The enzyme belongs to a group of histidine acid phosphatases and has the lowest Km values toward phytate, glucose-6-phosphate, and glucose-1-phosphate. Unexpectedly, stimulation of enzymatic activity by several divalent metal ions was observed for the AgpP enzyme. High-performance liquid chromatography (HPLC) and high-performance ion chromatography (HPIC) analyses of phytate hydrolysis products identify dl-myo-inositol 1,2,4,5,6-pentakisphosphate as the final product of the reaction, indicating that the Pantoea sp. AgpP glucose-1-phosphatase can be classified as a 3-phytase. The identification of the Pantoea sp. AgpP phytase and its unusual regulation by metal ions highlight the remarkable diversity of phosphorus metabolism regulation in soil bacteria. Furthermore, our data indicate that natural forest soils harbor rich reservoirs of novel phytate-hydrolyzing enzymes with unique biochemical features. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Novel Glucose-1-Phosphatase with High Phytase Activity and Unusual Metal Ion Activation from Soil Bacterium Pantoea sp. Strain 3.5.1

PubMed Central

Suleimanova, Aliya D.; Beinhauer, Astrid; Valeeva, Liia R.; Chastukhina, Inna B.; Balaban, Nelly P.; Greiner, Ralf

2015-01-01

Phosphorus is an important macronutrient, but its availability in soil is limited. Many soil microorganisms improve the bioavailability of phosphate by releasing it from various organic compounds, including phytate. To investigate the diversity of phytate-hydrolyzing bacteria in soil, we sampled soils of various ecological habitats, including forest, private homesteads, large agricultural complexes, and urban landscapes. Bacterial isolate Pantoea sp. strain 3.5.1 with the highest level of phytase activity was isolated from forest soil and investigated further. The Pantoea sp. 3.5.1 agpP gene encoding a novel glucose-1-phosphatase with high phytase activity was identified, and the corresponding protein was purified to apparent homogeneity, sequenced by mass spectroscopy, and biochemically characterized. The AgpP enzyme exhibits maximum activity and stability at pH 4.5 and at 37°C. The enzyme belongs to a group of histidine acid phosphatases and has the lowest Km values toward phytate, glucose-6-phosphate, and glucose-1-phosphate. Unexpectedly, stimulation of enzymatic activity by several divalent metal ions was observed for the AgpP enzyme. High-performance liquid chromatography (HPLC) and high-performance ion chromatography (HPIC) analyses of phytate hydrolysis products identify dl-myo-inositol 1,2,4,5,6-pentakisphosphate as the final product of the reaction, indicating that the Pantoea sp. AgpP glucose-1-phosphatase can be classified as a 3-phytase. The identification of the Pantoea sp. AgpP phytase and its unusual regulation by metal ions highlight the remarkable diversity of phosphorus metabolism regulation in soil bacteria. Furthermore, our data indicate that natural forest soils harbor rich reservoirs of novel phytate-hydrolyzing enzymes with unique biochemical features. PMID:26209662

[Isolation of wood-decaying fungi and evaluation of their enzymatic activity (Quindío, Colombia)].

PubMed

Chaparro, Deisy Fernanda; Rosas, Diana Carolina; Varela, Amanda

2009-12-31

White rot fungi (Ascomycota and Basidiomycota) were collected on fallen trunks with different decay stages, in a subandean forest (La Montaña del Ocaso nature reserve), and it was evaluated their ligninolitic activity. They were cultured on malt extract agar. Then it was performed semiquantitative tests for laccase and cellobiose dehydrogenase (CDH) activity using ABTS and DCPIP as enzymatic inducers. Based on the results of these tests, the fungi with higher activities from trunks with different decay stages were selected: Cookeina sulcipes (for stage 1), a fungus from the family Corticiaceae (for stage 2), Xylaria polymorpha (for stage 3) and Earliella sp. (for stage 4). A fermentation was performed at 28 degrees C, during 11 days, in a rotatory shaker at 150 rpm. Biomass, glucose, proteins and enzyme activities measurements were performed daily. The fungi that were in the trunks with decay states from 1 to 3, showed higher laccase activity as the state of decay increased. A higher DCH activity was also associated with a higher. Also, there was a positive relationship between both enzymes' activities. Erliella was the fungus which presented the highest biomass production (1140,19 g/l), laccase activity (157 UL(-1)) and CDH activity (43,50 UL(-1)). This work is the first report of laccase and CDH activity for Cookeina sulcipes and Earliella sp. Moreover, it gives basis for the use of these native fungi in biotechnological applications and the acknowledgment of their function in the wood decay process in native forest.

Spatio-temporal analysis of Xyleborus glabratus (Coleoptera: Circulionidae: Scolytinae) invasion in Eastern U.S. forests

Treesearch

F. H. Koch; W. D. Smith

2008-01-01

The non-native redbay ambrosia beetle, Xyleborus glabratus Eichhoff (Coleoptera: Curculionidae: Scolytinae), has recently emerged as a significant pest of southeastern u.s. coastal forests. Specifically, a fungal symbiont (Raffaelea sp.) of X. glabratus has caused mortality of redbay (Persea borbonia...

Entomopathogenic fungi from 'El Eden' Ecological Reserve, Quintana Roo, Mexico.

PubMed

Torres-Barragán; Anaya, Ana Luisa; Alatorre, Raquel; Toriello, Conchita

2004-07-01

Entomopathogenic fungi were isolated and identified from insects collected from the tropical forest and an agricultural area at El Eden Ecological Reserve, Quintana Roo, Mexico. These fungi were studied to determine their potential as biological control agents of greenhouse Trialeurodes vaporariorum (Homoptera: Aleyrodidae), and to contribute to the knowledge of biodiversity of this area. No pest insects were observed in the tropical forest. In contrast, all insects collected in the agricultural area were considered important pests by the local farmers, with the whitefly, as the most relevant, plentiful in Cucurbitaceae plants. From approximately 3400 collected insects in three different surveys, different anamorphic Ascomycetes were recovered. One isolate of Aspergillus sp., two of Penicillium sp., three of Paecilomyces marquandii, and three of Verticillium sp. out of 308 insects (2.9%) from three insect orders, Hymenoptera, Diptera and Isoptera in the tropical forest. In contrast, a higher number of fungal isolates were recovered from the agricultural area: three isolates from Aspergillus parasiticus, 100 of Fusarium moniliforme, one of Aschersonia sp., and 246 of Fusarium oxysporum out of 3100 insects (11.3%) from three insect orders, Homoptera, Coleoptera and Lepidoptera. The results of this study show Fusarium moniliforme and F oxysporum as highly virulent to infected insects in the agricultural area, with 100 and 246 isolates respectively, out of 350 infected insects of 3100 studied specimens. Laboratory whitefly nymph bioassays with isolates Ed29a of F. moniliforme, Ed322 of F. oxysporum, and Ed22 of P marquandii showed 96 to 97.5% insect mortality with no significant differences (P < 0.05) among them. F. oxysporum Ed322 produced no mortality when inoculated on tomato, bean, squash and maize seedlings (with and without injuries) compared to the 100% mortality caused by phytopathogenic strains, F. oxysporum f. sp. lycopersici and F. oxysporum f. sp. radicis lycopersici.

Diseases and parasites in wolves of the Riding Mountain National Park region, Manitoba, Canada.

PubMed

Stronen, Astrid V; Sallows, Tim; Forbes, Graham J; Wagner, Brent; Paquet, Paul C

2011-01-01

We examined wolf (Canis lupus) blood and fecal samples from the Riding Mountain National Park (RMNP) region of Manitoba, Canada. In 601 fecal samples collected during two study periods in RMNP and the Duck Mountain Provincial Park and Forest (DMPPF) we found gastrointestinal helminth eggs from Alaria sp. (15.5%), Capillaria sp. (1.0%), taeniid tapeworms (30.8%), Toxascaris sp. (1.7%), Toxocara sp. (0.2%), Trichuris sp. (2.2%), and Moniezia sp. (0.5%). In addition, we found Demodex sp. (0.2%) and the protozoal cysts/oocysts of Sarcocystis sp. (37.3%), Cryptosporidium sp. (1.2%), coccidia (Isospora sp. or Eimeria sp.) (1.7%), and Giardia sp. (29.5%). No fecal shedding of canine parvovirus (CPV, n=387) was detected. All 18 blood samples collected in RMNP showed CPV exposure and eight of 18 blood samples indicated canine distemper virus (CDV) exposure. One wolf died from CDV. Our results are consistent with previous findings on pathogens affecting wolves and with high Giardia sp. prevalence in wolves inhabiting agricultural regions.

Blind life in the Baltic amber forests: description of an eyeless species of the ground beetle genus Trechus Clairville, 1806 (Coleoptera: Carabidae: Trechini).

PubMed

Schmidt, Joachim; Hoffmann, Hannes; Michalik, Peter

2016-02-22

The first eyeless beetle known from Baltic amber, Trechus eoanophthalmus sp. n., is described and imaged using light microscopy and X-ray micro-computed tomography. Based on external characters, the new species is most similar to species of the Palaearctic Trechus sensu stricto clade and seems to be closely related to the Baltic amber fossil T. balticus Schmidt & Faille, 2015. Due to the poor conservation of the internal parts of the body, no information on the genital characters can be provided. Therefore, the systematic position of this fossil within the megadiverse genus Trechus remains dubious. The occurrence of the blind and flightless T. eoanophthalmus sp. n. in the Baltic amber forests supports a previous hypothesis that these forests were located in an area partly characterised by mountainous habitats with temperate climatic conditions.

Three new cryptic species of Euglossa from Brazil (Hymenoptera, Apidae)

PubMed Central

Nemésio, André; Engel, Michael S.

2012-01-01

Abstract Three new species of orchid bees are described and figured from the Amazon and Atlantic forests of Brazil. Euglossa clausi sp. n., Euglossa moratoi sp. n., and Euglossa pepei sp. n. are distinguished from their close congeners Euglossa crassipunctata Moure, Euglossa parvula Dressler, and Euglossa sapphirina Moure, previously placed in the subgenus Euglossa (Glossurella) Dressler, 1982, a demonstrably paraphyletic assemblage requiring serious reconsideration. Their affinities with related species are discussed and pertinent characters are figured. PMID:23129986

Australasian sequestrate fungi 18: Solioccasus polychromus gen. & sp. nov., a richly colored, tropical to subtropical, hypogeous fungus

Treesearch

J. M. Trappe; M. A. Castellano; R. E. Halling; T. W. Osmundson; M. Binder; N. Fechner; N. Malajczuk

2013-01-01

Solioccasus polychromus gen. & sp. nov., the most brightly colored hypogeous fungus known, is described from Papua New Guinea and tropical northern Australia south into subtropical forests along the Queensland coast and coastal mountains to near Brisbane. Phylogenetic analysis of molecular data places it as a sister genus to Bothia...

[Odocoileus virginianus diet (Artiodactyla: Cervidae) in a temperate forest of Northern Oaxaca, Mexico].

PubMed

González, Graciela; Briones-Salas, Miguel

2012-03-01

The Sierra Madre de Oaxaca region, located in the Northern state of Oaxaca, Mexico, is an area of forest ecosystems subject to high exploitation rates, although in some areas its temperate forests are conserved by indigenous community initiatives that live there. We analyzed the diet of white tailed-deer (Odocoileus virginianus) in the localities of Santa Catarina Lachatao and San Miguel Amatlán from June 1998 to August 1999. Sampling was done during both the wet and dry seasons, and included the observation of browsing traces (238 observations), microhistological analysis of deer feces (28 deer pellet-groups), and two stomach content analysis. The annual diet of white-tailed deer was composed of 42 species from 23 botanical families. The most represented families in the diet of this deer were Fagaceae, Asteraceae, Ericaceae and Fabaceae. There were significant differences in the alpha diversity of the diet during the wet and dry seasons (H'=2.957 and H'=1.832, respectively). The similarity percentage between seasons was 56%. Differences in plant species frequency were significantly higher during the wet season. Herbaceous plants made up the greatest percentage of all the species consumed. The preferred species throughout the year were Senecio sp. (shrub), Sedum dendroideum (herbaceous), Arctostaphylos pungens (shrub) and Satureja macrostema (shrub). Diet species richness was found to be lower than that observed in a tropical forest (Venezuela), tropical dry forest (Mexico) and temperate deciduous and mixed forest (Mexico), but similar to the diet species richness observed in a tropical dry forest (Costa Rica) and temperate coniferous and deciduous forests (USA).

Spatio-temporal analysis of Xyleborus glabratus (Coleoptera: Circulionidae: Scolytinae) Invasion in Eastern U.S. Forests

Treesearch

F.H. Koch; W.D. Smith

2008-01-01

The non-native redbay ambrosia beetle, Xyleborus glabratus Eichhoff (Coleoptera: Curculionidae: Scolytinae), has recently emerged as a signiÞcant pest of southeastern U.S. coastal forests. SpeciÞcally, a fungal symbiont (Raffaelea sp.) of X. glabratus has caused mortality of redbay (Persea borbonia...

How far could a squirrel travel in the treetops? A prehistory of the southern forest

Treesearch

Paul B. Hamel; Edward R. Buckner

1998-01-01

Conservation activities aimed at protecting old-growth forests; at maintaining populations of desired species groups, such as oaks (Quercus sp.), wild turkeys (Meleagris gallopavo), other game species or Neotropical migratory birds; and at increasing populations of endangered species, such as red-cockaded woodpeckers (Picoides borealis), Bachman's warblers (...

Candida andamanensis sp. nov., Candida laemsonensis sp. nov. and Candida ranongensis sp. nov., anamorphic yeast species isolated from estuarine waters in a Thai mangrove forest.

PubMed

Am-In, Somjit; Limtong, Savitree; Yongmanitchai, Wichien; Jindamorakot, Sasitorn

2011-02-01

Five strains (RV5(T), RV140, R31(T), RS17 and RS28(T)) representing three novel anamorphic ascomycetous yeast species were isolated by membrane filtration from estuarine waters collected from a mangrove forest in Laem Son National Park, Ranong Province, Thailand, on different occasions. On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, sequence analysis of the D1/D2 domain of the large-subunit rRNA gene and the internal transcribed spacer region and phylogenetic analysis, three strains were found to represent two novel Candida species. Two strains (RV5(T) and RV140) represented a single novel species, for which the name Candida laemsonensis sp. nov. is proposed. The type strain is RV5(T) (=BCC 35154(T) =NBRC 105873(T) =CBS 11419(T)). Strain R31(T) was assigned to a novel species that was named Candida andamanensis sp. nov. (type strain R31(T) =BCC 25965(T) =NBRC 103862(T) =CBS 10859(T)). On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, sequence analysis of the D1/D2 domain of the large-subunit rRNA gene and phylogenetic analysis, strains RS17 and RS28(T) represented another novel species of Candida, for which the name Candida ranongensis sp. nov. is proposed. The type strain is RS28(T) (=BCC 25964(T) =NBRC 103861(T) =CBS 10861(T)).

A small mammal community in a forest fragment, vegetation corridor and coffee matrix system in the Brazilian Atlantic forest.

PubMed

Rocha, Mariana Ferreira; Passamani, Marcelo; Louzada, Júlio

2011-01-01

The objective of our work was to verify the value of the vegetation corridor in the conservation of small mammals in fragmented tropical landscapes, using a model system in the southeastern Minas Gerais. We evaluated and compared the composition and structure of small mammals in a vegetation corridor, forest fragments and a coffee matrix. A total of 15 species were recorded, and the highest species richness was observed in the vegetation corridor (13 species), followed by the forest fragments (10) and the coffee matrix (6). The absolute abundance was similar between the vegetation corridor and fragments (F = 22.94; p = 0.064), and the greatest differences occurred between the vegetation corridor and the matrix (F = 22.94; p = 0.001) and the forest fragments and the matrix (F = 22.94; p = 0.007). Six species showed significant habitat preference possibly related to the sensitivity of the species to the forest disturbance. Marmosops incanus was the species most sensitive to disturbance; Akodon montensis, Cerradomys subflavus, Gracilinanus microtarsus and Rhipidomys sp. displayed little sensitivity to disturbance, with a high relative abundance in the vegetation corridor. Calomys sp. was the species least affected by habitat disturbance, displaying a high relative abundance in the coffee matrix. Although the vegetation corridors are narrow (4 m width), our results support the hypothesis in which they work as a forest extension, share most species with the forest fragment and support species richness and abundance closer to forest fragments than to the coffee matrix. Our work highlights the importance and cost-effectiveness of these corridors to biodiversity management in the fragmented Atlantic Forest landscapes and at the regional level.

A Small Mammal Community in a Forest Fragment, Vegetation Corridor and Coffee Matrix System in the Brazilian Atlantic Forest

PubMed Central

Rocha, Mariana Ferreira; Passamani, Marcelo; Louzada, Júlio

2011-01-01

The objective of our work was to verify the value of the vegetation corridor in the conservation of small mammals in fragmented tropical landscapes, using a model system in the southeastern Minas Gerais. We evaluated and compared the composition and structure of small mammals in a vegetation corridor, forest fragments and a coffee matrix. A total of 15 species were recorded, and the highest species richness was observed in the vegetation corridor (13 species), followed by the forest fragments (10) and the coffee matrix (6). The absolute abundance was similar between the vegetation corridor and fragments (F = 22.94; p = 0.064), and the greatest differences occurred between the vegetation corridor and the matrix (F = 22.94; p = 0.001) and the forest fragments and the matrix (F = 22.94; p = 0.007). Six species showed significant habitat preference possibly related to the sensitivity of the species to the forest disturbance. Marmosops incanus was the species most sensitive to disturbance; Akodon montensis, Cerradomys subflavus, Gracilinanus microtarsus and Rhipidomys sp. displayed little sensitivity to disturbance, with a high relative abundance in the vegetation corridor. Calomys sp. was the species least affected by habitat disturbance, displaying a high relative abundance in the coffee matrix. Although the vegetation corridors are narrow (4 m width), our results support the hypothesis in which they work as a forest extension, share most species with the forest fragment and support species richness and abundance closer to forest fragments than to the coffee matrix. Our work highlights the importance and cost-effectiveness of these corridors to biodiversity management in the fragmented Atlantic Forest landscapes and at the regional level. PMID:21912591

Six new machiens and nine products can triple commodity recovery from southern forests

Treesearch

Peter Koch

1978-01-01

In the South, about 0.8 ton of hardwoods grow on pine site for every ton of pine biomass. About half of this hardwood volume is in 11 oak (Quercus sp.) species, with sweetgum (Liquidambar styraciflua L.) and hickory (Carya sp.) also comprising important fractions. About half the volume is in trees 5.0 to 10.9...

New Phlugidia species (Orthoptera: Tettigoniidae: Meconematinae, Phlugidini) from the Eastern Arc Mountains of Tanzania, Africa.

PubMed

Hemp, Claudia

2013-01-01

Two new species of Phlugidia (Orthoptera: Tettigoniidae: Meconematinae) are described from the Eastern Arc Mountains of Tanzania. P. planicercus Hemp n. sp. occurs in lowland forest at the foothills of the Uluguru Mountains, while P. ob- tusicercus Hemp n. sp. was collected in the Nguru Mountains. A key to Phlugidia species is provided.

Increasing diversity of land planarians (Platyhelminthes: Geoplanidae) in the Interior Atlantic Forest with the description of two new species and new records from Argentina.

PubMed

Negrete, Lisandro; Brusa, Francisco

2017-12-04

Here, we describe two new species of land planarians of the genera Pasipha and Imbira from the Atlantic Forest of Argentina: Pasipha quirogai sp. nov. and Imbira negrita sp. nov. Their external features and internal anatomy distinguish them from their congeners. Pasipha quirogai sp. nov. is about 40mm long, characterized by brown beige dorsal pigmentation with a golden yellow median band and thin graphite black para-median stripes, cylindrical pharynx, extrabulbar prostatic vesicle with paired proximal portion, male atrium with small folds in its proximal part, and female canal opening into the dorso-caudal wall of the female atrium. Imbira negrita sp. nov. is about 110mm long, with jet black dorsal pigmentation, pharynx collar-type, short female canal opening in the postero-dorsal portion of the female atrium, and epithelial lining of female atrium with stratified appearance. We also provide exhaustive descriptions of Geoplana quagga, Obama ladislavii, and Paraba multicolor, all recorded for the first time in Argentina, by analysing anatomical features of taxonomic relevance. In addition, we improve the description of G. quagga, mainly regarding the musculature, secretory cells, and the copulatory apparatus.

Description, biology and molecular characterisation of Serpentirhabdias moi n. sp. (Nematoda: Rhabdiasidae) from Chironius exoletus (Serpentes: Colubridae) in Brazil.

PubMed

Machado, Soraya A; Kuzmin, Yuriy; Tkach, Vasyl V; Dos Santos, Jeannie Nascimento; Gonçalves, Evonnildo Costa; de Vasconcelos Melo, Francisco Tiago

2018-05-09

A new species of the genus Serpentirhabdias Tkach, Kuzmin et Snyder, 2014, S. moi n. sp., is described from a colubroid snake Chironius exoletus from Caxiuanã National Forest, State of Pará, Brazil. The species is characterised by having a triangular oral opening, absence of the buccal capsule, presence of six minute onchia in the oesophastome, and excretory glands of approximately the same length as the oesophagus. These qualitative morphological characters, as well as some measurements, differentiate the new species from other Neotropical and Nearctic Serpentirhabdias spp. The morphological description of parasitic adults of S. moi n. sp. is complemented by the description of free-living stages including males, females, and infective larvae. Comparative analysis of partial sequences of cox1 and 12S mitochondrial genes strongly supported the status of S. moi n. sp. as a new species. Molecular phylogeny based on sequences of the nuclear DNA region spanning the 3' end of the 18S nuclear rRNA gene, ITS region (ITS1 + 5.8S + ITS2) and 5' end of the 28S gene supported monophyly of all rhabdiasid genera included in the analysis and placed the new species into the Serpentirhabdias clade as sister taxon to S. fuscovenosa. Copyright © 2018 Elsevier B.V. All rights reserved.

The desert tortoise trichotomy: Mexico hosts a third, new sister-species of tortoise in the Gopherus morafkai–G. agassizii group

PubMed Central

Edwards, Taylor; Karl, Alice E.; Vaughn, Mercy; Rosen, Philip C.; Torres, Cristina Meléndez; Murphy, Robert W.

2016-01-01

Abstract Desert tortoises (Testudines; Testudinidae; Gopherus agassizii group) have an extensive distribution throughout the Mojave, Colorado, and Sonoran desert regions. Not surprisingly, they exhibit a tremendous amount of ecological, behavioral, morphological and genetic variation. Gopherus agassizii was considered a single species for almost 150 years but recently the species was split into the nominate form and Morafka’s desert tortoise, Gopherus morafkai, the latter occurring south and east of the Colorado River. Whereas a large body of literature focuses on tortoises in the United States, a dearth of investigations exists for Mexican animals. Notwithstanding, Mexican populations of desert tortoises in the southern part of the range of Gopherus morafkai are distinct, particularly where the tortoises occur in tropical thornscrub and tropical deciduous forest. Recent studies have shed light on the ecology, morphology and genetics of these southern ‘desert’ tortoises. All evidence warrants recognition of this clade as a distinctive taxon and herein we describe it as Gopherus evgoodei sp. n. The description of the new species significantly reduces and limits the distribution of Gopherus morafkai to desertscrub habitat only. By contrast, Gopherus evgoodei sp. n. occurs in thornscrub and tropical deciduous forests only and this leaves it with the smallest range of the three sister species. We present conservation implications for the newly described Gopherus evgoodei, which already faces impending threats. PMID:27006625

Woodpecker use and fall rates of snags created by killing ponderosa pine infected with dwarf mistletoe.

Treesearch

Catherine G. Parks; David A. Conklin; Larry Bednar; Helen. Maffei

1999-01-01

Ponderosa pine (Pinus ponderosa Dougl. ex Laws.) killed as part of a forest management project to reduce dwarf mistletoe (Arceuthobium sp.) in the Gila National Forest, New Mexico, were evaluated for wildlife value. One hundred and two dwarf mistletoe-infected trees were killed by basal burning, basal girdling, or by a...

Interacting genes in the pine-fusiform rust forest pathosystem

Treesearch

H.V. Amerson; T.L. Kubisiak; S.A. Garcia; G.C. Kuhlman; C.D. Nelson; S.E. McKeand; T.J. Mullin; B. Li

2005-01-01

Fusiform rust (FR) disease of pines, caused by Cronartium quercuum f.sp. fusiforme (Cqf), is the most destructive disease in pine plantations of the southern U. S. The NCSU fusiform rust program, in conjunction with the USDA-Forest Service in Saucier, MS and Athens, GA, has research underway to elucidate some of the genetic interactions in this...

Effects of canopy herbivory on nutrient cycling in a northern hardwood forest in Western North Carolina

Treesearch

Barbara C. Reynolds; Mark D. Hunter; D.A. Crossely

2000-01-01

In May 1998 an outbreak of sawflies, Periclista sp. (Hymenoptera: Symphyta), occurred in a high-elevation hardwood forest in western North Carolina. Estimated defoliation of northern red oak (Quercus rubra) and white oak (Q. alba) removed 40% of leaf area Weights of frass (insect feces) collected at the site...

Three anamorphic yeast species Candida sanitii sp. nov., Candida sekii sp. nov. and Candida suwanaritii, three novel yeasts in the Saturnispora clade isolated in Thailand.

PubMed

Limtong, Savitree; Kaewwichian, Rungluk; Am-In, Somjit; Boonmak, Chanita; Jindamorakot, Sasitorn; Yongmanitchai, Wichien; Srisuk, Natana; Kawasaki, Hiroko; Nakase, Takashi

2010-02-01

Nine strains of three novel anamorphic yeast species were obtained from samples collected in Thailand including six strains (RV96, RV152, R14, RS9, RS58 and EA1) obtained from estuarine waters collected from two mangrove forests, one strain (ST84) from insect frass and two strains (SR16 and UB13) from forest soils. On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, and the sequence analysis of the D1/D2 domain of the large subunit rRNA gene, the nine strains were found to represent three novel Candida species in the Saturnispora clade. Five strains (RV96, RV152, R14, RS9 and RS58) were assigned as a single novel species, which was named Candida sanitii sp. nov. The type strain is RV152(T) (BCC 25967(T)=NBRC 103864(T)=CBS 10864(T)). Strain EA1 was named as Candida suwanaritii sp. nov. The type strain is EA1(T) (BCC 29900(T)=NBRC 104877(T)=CBS 11021(T)). Three strains (ST84, SR16 and UB13) represented another novel species, for which Candida sekii sp. nov. is proposed. The type strain is ST84(T) (BCC 8320(T)=NBRC 105671(T)=CBS 10931(T)).

Intestinal Helminths of Wild Bonobos in Forest-Savanna Mosaic: Risk Assessment of Cross-Species Transmission with Local People in the Democratic Republic of the Congo.

PubMed

Narat, Victor; Guillot, Jacques; Pennec, Flora; Lafosse, Sophie; Grüner, Anne Charlotte; Simmen, Bruno; Bokika Ngawolo, Jean Christophe; Krief, Sabrina

2015-12-01

Phylogenetic and geographic proximities between humans and apes pose a risk of zoonotic transmission of pathogens. Bonobos (Pan paniscus) of the Bolobo Territory, Democratic Republic of the Congo, live in a fragmented forest-savanna mosaic setting, a marginal habitat for this species used to living in dense forests. Human activities in the forest have increased the risk of contacts between humans and bonobos. Over 21 months (September 2010-October 2013), we monitored intestinal parasites in bonobo (n = 273) and in human (n = 79) fecal samples to acquire data on bonobo parasitology and to assess the risk of intestinal helminth transmission between these hosts. Coproscopy, DNA amplification, and sequencing of stored dried feces and larvae were performed to identify helminths. Little difference was observed in intestinal parasites of bonobos in this dryer habitat compared to those living in dense forests. Although Strongylids, Enterobius sp., and Capillaria sp. were found in both humans and bonobos, the species were different between the hosts according to egg size or molecular data. Thus, no evidence of helminth transmission between humans and bonobos was found. However, because humans and this threatened species share the same habitat, it is essential to continue to monitor this risk.

Bleaching of leaf litter and associated microfungi in subboreal and subalpine forests.

PubMed

Hagiwara, Yusuke; Matsuoka, Shunsuke; Hobara, Satoru; Mori, Akira S; Hirose, Dai; Osono, Takashi

2015-10-01

Fungal decomposition of lignin leads to the whitening, or bleaching, of leaf litter, especially in temperate and tropical forests, but less is known about such bleaching in forests of cooler regions, such as boreal and subalpine forests. The purposes of the present study were to examine the extent of bleached area on the surface of leaf litter and its variation with environmental conditions in subboreal and subalpine forests in Japan and to examine the microfungi associated with the bleaching of leaf litter by isolating fungi from the bleached portions of the litter. Bleached area accounted for 21.7%-32.7% and 2.0%-10.0% of total leaf area of Quercus crispula and Betula ermanii, respectively, in subboreal forests, and for 6.3% and 18.6% of total leaf area of B. ermanii and Picea jezoensis var. hondoensis, respectively, in a subalpine forest. In subboreal forests, elevation, C/N ratio and pH of the FH layer, and slope aspect were selected as predictor variables for the bleached leaf area. Leaf mass per area and lignin content were consistently lower in the bleached area than in the nonbleached area of the same leaves, indicating that the selective decomposition of acid unhydrolyzable residue (recalcitrant compounds such as lignin, tannins, and cutins) enhanced the mass loss of leaf tissues in the bleached portions. Isolates of a total of 11 fungal species (6 species of Ascomycota and 5 of Basidiomycota) exhibited leaf-litter-bleaching activity under pure culture conditions. Two fungal species (Coccomyces sp. and Mycena sp.) occurred in both subboreal and subalpine forests, which were separated from each other by approximately 1100 km.

A comparative study on phyllosphere nitrogen fixation by newly isolated Corynebacterium sp. & Flavobacterium sp. and their potentialities as biofertilizer.

PubMed

Giri, S; Pati, B R

2004-01-01

A number of nitrogen fixing bacteria has been isolated from forest phyllosphere on the basis of nitrogenase activity. Among them two best isolates are selected and identified as Corynebacterium sp. AN1 & Flavobacterium sp. TK2 able to reduce 88 and 132 n mol of acetylene (10(8)cells(-1)h(-1)) respectively. They were grown in large amount and sprayed on the phyllosphere of maize plants as a substitute for nitrogenous fertilizer. Marked improvements in growth and total nitrogen content of the plant have been observed by the application of these nitrogen-fixing bacteria. An average 30-37% increase in yield was obtained, which is nearer to chemical fertilizer treatment. Comparatively better effect was obtained by application of Flavobacterium sp.

Two new species of Euglossa from South America, with notes on their taxonomic affinities (Hymenoptera, Apidae)

PubMed Central

Hinojosa-Díaz, Ismael A.; Nemésio, André; Engel, Michael S.

2012-01-01

Abstract Two new species of the genus Euglossa Latreille, subgenus Glossurella Dressler are here presented. Euglossa (Glossurella) embera sp. n., from the Pacific lowlands of Colombia, and Euglossa (Glossurella) adiastola sp. n., from the Atlantic Forest of Brazil. Their taxonomic association and distinction are discussed, as well as the correct understanding of the subgenus Glossurella. PMID:23129981

Revision of the genus Reinmara Schaus, 1928 (Lepidoptera, Mimallonoidea, Mimallonidae) with the descriptions of four new species from South America

PubMed Central

Laurent, Ryan A. St; Herbin, Daniel; Mielke, Carlos G. C.

2017-01-01

Abstract The mimallonid genus Reinmara Schaus, 1928 is revised. The three previously described species, R. enthona (Schaus, 1905), R. minasa Schaus, 1928, and R. wolfei Herbin & C. Mielke, 2014 are redescribed and the females of each are described and figured for the first time. Additionally, we describe four new species, two Andean: R. andensis sp. n. and R. occidentalis sp. n., and two Brazilian: R. atlantica sp. n. and R. ignea sp. n.. The new species R. ignea and R. atlantica are likely of conservation concern due to their rarity in collections and their apparent endemism to an endangered biome, the Brazilian Atlantic Forest. PMID:28769690

Diversity and altitudinal distribution of Chrysomelidae (Coleoptera) in Peregrina Canyon, Tamaulipas, Mexico

PubMed Central

Sánchez-Reyes, Uriel Jeshua; Niño-Maldonado, Santiago; Jones, Robert W.

2014-01-01

Abstract The Chrysomelidae (Coleoptera) is a highly speciose family that has been poorly studied at the regional level in Mexico. In the present study, we estimated species richness and diversity in oak-pine forest, Tamaulipan thorny scrub and in tropical deciduous forests in Peregrina Canyon within the Altas Cumbres Protected Area of the northeastern state of Tamaulipas, Mexico. Sampling of Chrysomelidae consisted of five sweep net samples (200 net sweeps) within each of three sites during four sample periods: early dry season, late dry season, early wet season, and late wet season. Species were identified and total numbers per species were recorded for each sample. A total of 2,226 specimens were collected belonging to six subfamilies, 81 genera and 157 species of Chrysomelidae from the study area. Galerucinae was the most abundant subfamily with 1,828 specimens, representing 82.1% of total abundance in the study area. Lower abundance was recorded in Cassidinae (8.5%), Eumolpinae (3.6%), Cryptocephalinae (2.2%), Chrysomelinae (2.2%), and finally Criocerinae (1.3%). The highest species richness was also presented in the subfamily Galerucinae with 49% of the total obtained species followed by Cassidinae (20%), Cryptocephalinae (9.7%), Eumolpinae (9.7%), Chrysomelinae (6.5%) and Criocerinae (5.2%). The most common species were Centralaphthona fulvipennis Jacoby (412 individuals), Centralaphthona diversa (Baly) (248), Margaridisa sp.1 (219), Acallepitrix sp.1 (134), Longitarsus sp.1 (104), Heterispa vinula (Erichson) (91), Epitrix sp.1 (84) and Chaetocnema sp.1 (72). Twenty-two species were doubletons (1.97% of total abundance) and 52 were singletons (2.33%). The estimated overall density value obtained was 0.0037 individuals/m2. The greatest abundance and density of individuals were recorded at the lowest elevation site. However, alpha diversity increased with increasing altitude. Similarity values were less than 50% among the three sites indicating that each site had distinct species assemblages of Chrysomelidae. The highest abundance was obtained during the late dry season, whereas diversity indices were highest during the early wet season. The present work represents the first report of the altitudinal variation in richness, abundance, and diversity of Chrysomelidae in Mexico. These results highlight the importance of conservation of this heterogeneous habitat and establish baseline data for Chrysomelidae richness and diversity for the region. PMID:25061357

Molecular and Morphological Evidence Reveals a New Species in the Phyllomedusa hypochondrialis Group (Hylidae, Phyllomedusinae) from the Atlantic Forest of the Highlands of Southern Brazil

PubMed Central

Bruschi, Daniel P.; Lucas, Elaine M.; Garcia, Paulo C. A.; Recco-Pimentel, Shirlei M.

2014-01-01

The taxonomic status of a disjunctive population of Phyllomedusa from southern Brazil was diagnosed using molecular, chromosomal, and morphological approaches, which resulted in the recognition of a new species of the P. hypochondrialis group. Here, we describe P. rustica sp. n. from the Atlantic Forest biome, found in natural highland grassland formations on a plateau in the south of Brazil. Phylogenetic inferences placed P. rustica sp. n. in a subclade that includes P. rhodei + all the highland species of the clade. Chromosomal morphology is conservative, supporting the inference of homologies among the karyotypes of the species of this genus. Phyllomedusa rustica is apparently restricted to its type-locality, and we discuss the potential impact on the strategies applied to the conservation of the natural grassland formations found within the Brazilian Atlantic Forest biome in southern Brazil. We suggest that conservation strategies should be modified to guarantee the preservation of this species. PMID:25141279

Longivena, a new robber-fly genus from Brazil (Diptera, Asilidae, Asilinae).

PubMed

Vieira, Rodrigo; Rafael, José Albertino

2014-01-01

Longivena gen. n. and five new species are described and illustrated from caatinga and cerrado habitats from Brazil: Longivenadigitata sp. n., type-species (Maranhão, Bahia, Minas Gerais and Mato Grosso do Sul states), Longivenabilobata sp. n. (Maranhão state), Longivenaflava sp. n. (Mato Grosso do Sul state), Longivenalimeiraoliverai sp. n. (Maranhão state), Longivenaspatulata sp. n. (Maranhão state). An illustrated key is also provided.

A new genus and two new nematode species (Drilonematoidea: Ungellidae: Synoecneminae) parasitic in two morphs of Drawida ghilarovi Gates, endemic earthworm from the Russian Far East.

PubMed

Ivanova, Elena S; Ganin, Gennadiy N; Spiridonov, Sergei E

2014-03-01

Drasico n. g. is erected to accommodate two new species of nematode, Drasico nemoralis n. sp. and D. paludigenus n. sp., recovered from coelomic cavities of Drawida ghilarovi Gates, endemic earthworms of the Russian Far East. The new genus is characterised by the following unique for the Synoecneminae characters: apical portion of the head attenuated, cephalic hooks displaced to the base of attenuated portion, amphids displaced posterior to cephalic hooks, excretory duct short and weak, males possessing several genital papilliform sensilla. The new species are differentiated by the size, number and disposition of the male genital sensilla (larger and more numerous in D. nemoralis n. sp.); the body shape of females (with thinner neck and wider mid-body in D. paludigenus n. sp.) and the ovarian tube arranged in transversal folds in D. paludigenus (vs longitudinal folds in D. nemoralis n. sp.). Nucleotide sequences of D2-D3 expansion segment of 28S rDNA for the two new species differed at 13 positions. Phylogenetic analysis revealed close relationships of Drasico n. g. with species of Siconema Timm, 1966. The host species was represented by two morphs (blue-grey forest and tar-black meadow-swamp morph) with intraspecific divergence of 16-17% for cytochrome c oxidase subunit 1 (COI) gene, and each host morph was found infected by a different nematode species. A co-infection with the plectid nematode Creagrocercus drawidae Ivanova & Spiridonov, 2011 was recorded together with D. nemoralis n. sp. in the blue-grey forest morph.

Forest site preparation effects on Georgia Piedmont soils over a 10-year period

Treesearch

James H. Miller; M.B. Edwards

1997-01-01

More than a quarter-million acres of forest lands in the Southeast are site prepared annually using mechanical treatments with little to no information on long-term soil sustainability outcomes. The objectives of this rcscarch was to gain a first-view of the soil changes after the following integrated site preparation (SP) treatments: none (cheek), chainsaw felling,...

Variability of fire behavior, fire effects, and emissions in Scotch pine forests of central Siberia

Treesearch

D. J. McRae; Susan Conard; G. A. Ivanova; A. I. Sukhinin; Steve Baker; Y. N. Samsonov; T. W. Blake; V. A. Ivanov; A. V. Ivanov; T. V. Churkina; WeiMin Hao; K. P. Koutzenogij; Nataly Kovaleva

2006-01-01

As part of the Russian FIRE BEAR (Fire Effects in the Boreal Eurasia Region) Project, replicated 4-ha experimental fires were conducted on a dry Scotch pine (Pinus sylvestris)/lichen (Cladonia sp.)/feathermoss (Pleurozeum schreberi) forest site in central Siberia. Observations from the initial seven surface fires (2000-2001) ignited under a range of burning...

A new species of Pristimantis (Amphibia, Anura, Craugastoridae) from a montane forest of the Pui Pui Protected Forest in central Peru (Región Junín)

PubMed Central

Lehr, Edgar; Moravec, Jiří

2017-01-01

Abstract A new species of frog of the genus Pristimantis is described from a montane forest between 1700 and 1800 m a.s.l. of the Pui Pui Protected Forest (Región Junín) in central Peru. Pristimantis ashaninka sp. n. is described based on five adult females (snout–vent length 23.1–26.7 mm) and ten juveniles (snout-vent length 10.6–13.4). It differs from its congeners by having the skin on dorsum shagreen with many conical tubercles giving it a spinose appearance, lacking a tympanum, having groin, anterior and posterior surfaces of thighs uniformly grayish brown, and a pale bronze iris with fine black reticulations, a median reddish hint horizontally across iris, and a black narrow vertical streak from pupil across lower and upper half of iris. Among the Peruvian Pristimantis that lack a tympanum, Pristimantis ashaninka sp. n. is morphologically most similar to Pristimantis lirellus, Pristimantis martiae, and Pristimantis rhabdocnemus. However, 16S DNA barcoding revealed clear distinctions between all four species of Pristimantis. PMID:28228669

Description and molecular diagnosis of a new species of Brunfelsia (Solanaceae) from the Bolivian and Argentinean Andes

PubMed Central

Filipowicz, Natalia; Nee, Michael H.; Renner, Susanne S.

2012-01-01

Abstract Brunfelsia plowmaniana N.Filipowicz & M.Nee sp. nov., a species from humid and cloud forests of the Bolivian and Argentinean Andes, is described and provided with a molecular diagnosis, using provisions available in the recently approved International Code of Nomenclature for algae, fungi and plants. Specimens belonging to the new species were previously placed in the polymorphic Brunfelsia uniflora (Pohl) D.Don, which a molecular phylogeny revealed as polyphyletic. Revision of numerous collections revealed clear morphological differences between the new species and Brunfelsia uniflora, the type locality of which is in the state of São Paulo, Brazil. PMID:22461731

Revisions of Ruizodendron and Pseudephedranthus (Annonaceae) including a new species and an overview of most up-to-date revisions of Neotropical Annonaceae genera

PubMed Central

Erkens, Roy H.J.; Oosterhof, Jessica; Westra, Lubbert Y.T.; Maas, Paul J.M.

2017-01-01

Abstract We present revisions of the Neotropical genera Ruizodendron and Pseudephedranthus (Annonaceae). Ruizodendron includes a single species R. ovale. Pseudephedranthus now comprises two species, with the description of the new species P. enigmaticus sp. nov. extending the range of the genus beyond the Upper Rio Negro region of Brazil (Amazonas) and adjacent Venezuela (P. fragrans), to include Guyana, Suriname, and the Brazilian state of Pará. An overview is provided of current revisions of Neotropical Annonaceae genera that will aid in accessing proper species information for this frequently encountered tropical rain forest family. PMID:29158697

Hyboptera Chaudoir, 1872 of the Cryptobatida group of subtribe Agrina: A taxonomic revision with notes on their ways of life (Insecta, Coleoptera, Carabidae, Lebiini).

PubMed

Erwin, Terry L; Henry, Shasta C

2017-01-01

Hyboptera Chaudoir, 1872 of the Cryptobatida group of subtribe Agrina, Lebiini, living in the Neotropics and southernmost Nearctic realms are diagnosed, described, and illustrated, and new species are assigned to two inclusive species groups. Occurrences of species range from Texas, USA, to the state of Santa Caterina in Brazil. Seven new species of Hyboptera are described: Hyboptera biolat Erwin & Henry, sp. n. ; Type locality - Perú, Madre de Dios, Manu Reserved Zone, Río Manu, BIOLAT Biological Station, Pakitza; Hyboptera vestiverdis Henry & Erwin, sp. n. ; Type locality - Perú, Madre de Dios, Manu Reserved Zone, Río Manu, BIOLAT Biological Station, Pakitza; Hyboptera lucida Henry & Erwin, sp. n. ; Type locality - French Guiana, Cayenne, Commune de Roura, Montagne des Chevaux; Hyboptera scheelea Erwin & Henry, sp. n. ; Type locality - Perú, Loreto, Pacaya-Samiria National Reserve, Río Samiria (South Branch), Camp Terry; Hyboptera shasta Erwin, sp. n. ; Type locality - Brazil, Amazonas, north of Manaus on Amazonas 010 at Km 26, Reserva Ducke; Hyboptera tepui Erwin & Henry, sp. n. ; Type locality - Venezuela, Amazonas, Cerro de la Neblina, Río Baria Basecamp; Hyboptera tiputini Erwin & Henry, sp. n. ; Type locality - Ecuador, Orellana, Yasuni National Park (edge), 95.43 km E (heading 101.46°) Coca, Tiputini Biodiversity Station. A revised identification key is provided to the genera of the Cryptobatida group and another to the species of Hyboptera Chaudoir and distributional data are provided for all known species of the latter. Adults of these species often occur in the canopy of many tropical tree species and records are reported where known. In addition, adults are found under the webbing of Psocoptera and in fleshy anther rings of Bombacaceae ( Pseudobombax septenatum (Jacq.) Dugand), on the rain forest floor in the dry season. Larval and pupal stages of one species from Panamá are known from under bark of living fence posts; however, these immature stages are not treated in the current paper.

Revision of the Australian species of the weevil genus Trigonopterus Fauvel

PubMed Central

Riedel, Alexander; Tänzler, Rene

2016-01-01

Abstract The Australian species of the genus Trigonopterus Fauvel are revised. Eight previously recognized species are redescribed and 24 additional new species are described: Trigonopterus allaetus Riedel, sp. n., Trigonopterus athertonensis Riedel, sp. n., Trigonopterus australinasutus Riedel, sp. n., Trigonopterus australis Riedel, sp. n., Trigonopterus bisignatus Riedel, sp. n., Trigonopterus bisinuatus Riedel, sp. n., Trigonopterus boolbunensis Riedel, sp. n., Trigonopterus cooktownensis Riedel, sp. n., Trigonopterus daintreensis Riedel, sp. n., Trigonopterus deplanatus Riedel, sp. n., Trigonopterus finniganensis Riedel, sp. n., Trigonopterus fraterculus Riedel, sp. n., Trigonopterus garradungensis Riedel, sp. n., Trigonopterus hasenpuschi Riedel, sp. n., Trigonopterus hartleyensis Riedel, sp. n., Trigonopterus kurandensis Riedel, sp. n., Trigonopterus lewisensis Riedel, sp. n., Trigonopterus montanus Riedel, sp. n., Trigonopterus monteithi Riedel, sp. n., Trigonopterus mossmanensis Riedel, sp. n., Trigonopterus oberprieleri Riedel, sp. n., Trigonopterus robertsi Riedel, sp. n., Trigonopterus terraereginae Riedel, sp. n., Trigonopterus yorkensis Riedel, sp. n.. All new species are authored by the taxonomist-in-charge, Alexander Riedel. Lectotypes are designated for the following names: Idotasia aequalis Pascoe, Idotasia albidosparsa Lea, Idotasia evanida Pascoe, Idotasia laeta Lea, Idotasia rostralis Lea, Idotasia sculptirostris Lea, Idotasia squamosa Lea. A new combination of the name Idotasia striatipennis Lea is proposed: Trigonopterus striatipennis (Lea), comb. n.. A key to the species is provided. Australian Trigonopterus occur in coastal Queensland, narrowly crossing into New South Wales. The southern parts of the range are inhabited by species found on foliage. A rich fauna of 19 edaphic species inhabiting the leaf litter of tropical forests is reported for the first time from the Australian Wet Tropics. PMID:26877696

High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512

DOE Office of Scientific and Technical Information (OSTI.GOV)

De Meyer, Sofie E.; Fabiano, Elena; Tian, Rui

Cupriavidus sp. strain UYPR2.512 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Parapiptadenia rigida grown in soils from a native forest of Uruguay. Here we describe the features of Cupriavidus sp. strain UYPR2.512, together with sequence and annotation. We find the 7,858,949 bp high-quality permanent draft genome is arranged in 365 scaffolds of 369 contigs, contains 7,411 protein-coding genes and 76 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

Timber sale planning and analysis system: A user`s guide to the TSPAS sale program. Forest Service general technical report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schuster, E.G.; Jones, J.G.; Meacham, M.L.

1995-08-01

Presents a guide to operation and interpretation of TSPAS Sale Program (TSPAS SP), a menu-driven computer program that is one of two programs in the Timber Sale Planning and Analysis System. TSPAS SP is intended to help field teams design and evaluate timber sale alternatives. TSPAS SP evaluate current and long-term timber implications along with associated nontimber outputs. Features include multiple entries and products, real value change, and graphical input. Guide includes user instructions, a glossary, a listing of data needs, and an explanation of error messages.

High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512

DOE PAGES

De Meyer, Sofie E.; Fabiano, Elena; Tian, Rui; ...

2015-04-11

Cupriavidus sp. strain UYPR2.512 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Parapiptadenia rigida grown in soils from a native forest of Uruguay. Here we describe the features of Cupriavidus sp. strain UYPR2.512, together with sequence and annotation. We find the 7,858,949 bp high-quality permanent draft genome is arranged in 365 scaffolds of 369 contigs, contains 7,411 protein-coding genes and 76 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

Description of two new cicada species of the genus Poviliana Boulard (Insecta: Hemiptera, Cicadoidea, Cicadidae) from New Caledonia.

PubMed

Delorme, Quentin; Jourdan, Hervé; Mille, Christian

2015-05-18

Poviliana dayubiikii Delorme sp. nov. and Poviliana montrouzieri Delorme sp. nov. are described from New Caledonia. They are respectively found in mid altitude rain forest on Mont Panié (570 m) and Col des Roussettes (300 m). Male calling songs of the two new species are described from the field recordings. A key to the species of Poviliana is also provided.

Two new endemic species of Ameiva (Squamata: Teiidae) from the dry forest of northwestern Peru and additional information on Ameiva concolor Ruthven, 1924.

PubMed

Koch, Claudia; Venegas, Pablo J; Rödder, Dennis; Flecks, Morris; Böhme, Wolfgang

2013-12-04

We describe two new species of Ameiva Meyer, 1795 from the dry forest of the Northern Peruvian Andes. The new species Ameiva nodam sp. nov. and Ameiva aggerecusans sp. nov. share a divided frontal plate and are differentiated from each other and from their congeners based on genetic (12S and 16S rRNA genes) and morphological characteristics. A. nodam sp. nov. has dilated postbrachials, a maximum known snout-vent length of 101 mm, 10 longitudinal rows of ventral plates, 86-113 midbody granules, 25-35 lamellae under the fourth toe, and a color pattern with 5 longitudinal yellow stripes on the dorsum. Ameiva aggerecusans sp. nov. has not or only hardly dilated postbrachials, a maximum known snout-vent length of 99.3 mm, 10-12 longitudinal rows of ventral plates, 73-92 midbody granules, 31-39 lamellae under the fourth toe, and the females and juveniles of the species normally exhibit a cream-colored vertebral stripe on a dark dorsum ground color. We provide information on the intraspecific variation and distribution of A. concolor. Furthermore, we provide information on the environmental niches of the taxa and test for niche conservatism. 

Bifiguratus adelaidae, gen. et sp. nov., a new member of Mucoromycotina in endophytic and soil-dwelling habitats

DOE PAGES

Torres-Cruz, Terry J.; Billingsley Tobias, Terri L.; Almatruk, Maryam; ...

2017-08-08

Illumina amplicon sequencing of soil in a temperate pine forest in the southeastern United States detected an abundant, nitrogen (N)-responsive fungal genotype of unknown phylogenetic affiliation. Two isolates with ribosomal sequences consistent with that genotype were subsequently obtained. Examination of records in GenBank revealed that a genetically similar fungus had been isolated previously as an endophyte of moss in a pine forest in the southwestern United States. The three isolates were characterized using morphological, genomic, and multilocus molecular data (18S, internal transcribed spacer [ITS], and 28S rRNA sequences). Phylogenetic and maximum likelihood phylogenomic reconstructions revealed that the taxon represents amore » novel lineage in Mucoromycotina, only preceded by Calcarisporiella, the earliest diverging lineage in the subphylum. Sequences for the novel taxon are frequently detected in environmental sequencing studies, and it is currently part of UNITE’s dynamic list of most wanted fungi. The fungus is dimorphic, grows best at room temperature, and is associated with a wide variety of bacteria. In this paper, a new monotypic genus, Bifiguratus, is proposed, typified by Bifiguratus adelaidae.« less

Bifiguratus adelaidae, gen. et sp. nov., a new member of Mucoromycotina in endophytic and soil-dwelling habitats

DOE Office of Scientific and Technical Information (OSTI.GOV)

Torres-Cruz, Terry J.; Billingsley Tobias, Terri L.; Almatruk, Maryam

Illumina amplicon sequencing of soil in a temperate pine forest in the southeastern United States detected an abundant, nitrogen (N)-responsive fungal genotype of unknown phylogenetic affiliation. Two isolates with ribosomal sequences consistent with that genotype were subsequently obtained. Examination of records in GenBank revealed that a genetically similar fungus had been isolated previously as an endophyte of moss in a pine forest in the southwestern United States. The three isolates were characterized using morphological, genomic, and multilocus molecular data (18S, internal transcribed spacer [ITS], and 28S rRNA sequences). Phylogenetic and maximum likelihood phylogenomic reconstructions revealed that the taxon represents amore » novel lineage in Mucoromycotina, only preceded by Calcarisporiella, the earliest diverging lineage in the subphylum. Sequences for the novel taxon are frequently detected in environmental sequencing studies, and it is currently part of UNITE’s dynamic list of most wanted fungi. The fungus is dimorphic, grows best at room temperature, and is associated with a wide variety of bacteria. In this paper, a new monotypic genus, Bifiguratus, is proposed, typified by Bifiguratus adelaidae.« less

New anamorphic yeast species: Candida infanticola sp. nov., Candida polysorbophila sp. nov., Candida transvaalensis sp. nov. and Trigonopsis californica sp. nov.

PubMed

Kurtzman, Cletus P

2007-08-01

Three new species of Candida and a new species of Trigonopsis are described based on their recognition from phylogenetic analysis of gene sequences from large subunit ribosomal RNA, ITS1/ITS2 rRNA, mitochondrial small subunit rRNA and cytochrome oxidase II. Candida infanticola sp. nov. (type strain NRRL Y-17858, CBS 7922) was isolated from the ear of an infant in Germany and is closely related to Candida sorbophila. Candida polysorbophila sp. nov. (type strain NRRL Y-27161, CBS 7317) is a member of the Zygoascus clade and was isolated in South Africa as a contaminant from an emulsion of white oil and polysorbate. Candida transvaalensis sp. nov. (type strain NRRL Y-27140, CBS 6663) was obtained from forest litter, the Transvaal, South Africa, and forms an isolated clade with Candida santjacobensis. Trigonopsis californica sp. nov. (type strain NRRL Y-27307, CBS 10351) represents a contaminant from wine in California, and forms a well-supported clade with Trigonopsis cantarellii, Trigonopsis variabilis and Trigonopsis vinaria.

Paridris Kieffer of the New World (Hymenoptera, Platygastroidea, Platygastridae)

PubMed Central

Talamas, Elijah J.; Masner, Lubomír; Johnson, Norman F.

2012-01-01

Abstract Paridris in the New World is revised (Hymenoptera: Platygastridae). Fifteen species are described, of which 13 are new. Paridris aenea (Ashmead)(Mexico (Tamaulipas) and West Indies south to Bolivia and southern Brazil (Rio de Janeiro state)), Paridris armata Talamas, sp. n. (Venezuela), Paridris convexa Talamas, sp. n. (Costa Rica, Panama), Paridris dnophos Talamas, sp. n. (Mexico (Vera Cruz) south to Bolivia and central Brazil (Goiás)), Paridris gongylos Talamas & Masner, sp. n. (United States: Appalachian Mountains of Virginia, Tennessee, South Carolina), Paridris gorn Talamas & Masner, sp. n. (United States: Ohio south to Alabama, Georgia), Paridris invicta Talamas & Masner, sp. n. (Brazil: São Paulo), Paridris isabelicae Talamas & Masner, sp. n. (Cuba, Dominican Republic), Paridris lemete Talamas & Masner, sp. n. (Puerto Rico), Paridris minor Talamas, sp. n. (Cuba), Paridris nayakorum Talamas, sp. n. (Costa Rica), Paridris pallipes (Ashmead)(southeastern Canada, United States south to Costa Rica, also Brazil (São Paulo), Paridris psydrax Talamas & Masner, sp. n. (Argentina, Mexico, Paraguay, United States, Venezuela), Paridris saurotos Talamas, sp. n. (Jamaica), Paridris soucouyant Talamas & Masner, sp. n. (Colombia, Trinidad and Tobago, Venezuela). Paridris brevipennis Fouts, Paridris laeviceps (Ashmead), and Paridris nigricornis (Fouts) are treated as junior synonyms of Paridris pallipes; Paridris opaca is transferred to Probaryconus. Lectotypes are designated for Idris aenea Ashmead and Caloteleia aenea Ashmead. PMID:23226959

Caamembecaia gratiosus n. gen., n. sp. (Acari: Trombiculidae), from Trinomys gratiosus (Gunter) (Rodentia: Echimydae), of Atlantic forest in southeastern Brazil.

PubMed

Gazêta, Gilberto S; Amorim, Marinete; Bossi, David E P; Linhares, Arício X; Serra-Freire, Nicolau M

2006-03-01

From June 1999 to May 2001, small mammals were captured in three areas of the Atlantic Forest in Southeastern Brazil and examined for ectoparasites. Analysis of ectoparasites revealed the presence of a new chigger genus and species, Caamembecaia gratiosus, from Trinomys gratiosus. This is the first record of a chigger from T. gratiosus.

Granite Rock Outcrops: An Extreme Environment for Soil Nematodes?

PubMed Central

Austin, Erin; Semmens, Katharine; Parsons, Charles

2009-01-01

We studied soil nematode communities from the surface of granite flatrock outcrops in the eastern Piedmont region of the United States. The thin soils that develop here experience high light intensity and extreme fluctuations in temperature and moisture and host unique plant communities. We collected soils from outcrop microsites in Virginia (VA) and North Carolina (NC) in various stages of succession (Primitive, Minimal, and Mature) and compared soil properties and nematode communities to those of adjacent forest soils. Nematodes were present in most outcrop soils, with densities comparable to forest soils (P > 0.05). Nematode communities in Mature and Minimal soils had lower species richness than forest soils (P < 0.05) and contained more bacterial-feeders and fewer fungal-feeders (P < 0.05). Primitive soils contained either no nematodes (NC) or only a single species (Mesodorylaimus sp., VA). Nematode communities were similar between Mature and Minimal soils, according to trophic group representation, MI, PPI, EI, SI, and CI (P > 0.05). Forest soils had a higher PPI value (P < 0.05), but otherwise community indices were similar to outcrop soils (P > 0.05). Outcrop nematode communities failed to group together in a Bray-Curtis cluster analysis, indicating higher variability in community structure than the Forest soils, which did cluster together. A high proportion of the nematodes were extracted from outcrop soils in coiled form (33-89%), indicating that they used anhydrobiosis to persist in this unique environment. PMID:22661780

Three new endemic species of Epictia Gray, 1845 (Serpentes: Leptotyphlopidae) from the dry forest of northwestern Peru.

PubMed

Koch, Claudia; Venegas, Pablo J; Böhme, Wolfgang

2015-06-02

Three new blind snake species of the genus Epictia are described based on material collected in the Peruvian Regions Amazonas, Cajamarca and La Libertad. All three species are well differentiated from all congeners based on characteristics of their morphology and coloration. They share 10 scale rows around the middle of the tail and possess two supralabials with the anterior one in broad contact with the supraocular. Epictia septemlineata sp. nov. has 16 subcaudal scales, 257 mid-dorsal scale rows, a yellowish-white rostral, and a black terminal spine. Epictia vanwallachi sp. nov. exhibits 16 subcaudals, 188 mid-dorsal scale rows, a grayish-brown rostral, and a yellow terminal spine. Epictia antoniogarciai sp. nov. features 14-18 subcaudals, 195-208 mid-dorsal scale rows, a bright yellow or yellowish-white rostral, and the terminal spine and terminal portion of the tail yellow. All three species were collected in the interandean dry forest valleys of the Marañón River and its tributaries. This region is an area of endemism and warrants further attention from systematic and conservation biologists.

Fourteen new species, one new genus, and eleven new country or state records for New World Lamiinae (Coleoptera, Cerambycidae).

PubMed

Martins, Ubirajara R; Santos-Silva, Antonio; Galileo, Maria Helena M

2015-06-26

Fourteen new species and one new genus are described from the New World in Lamiinae (Coleoptera: Cerambycidae): Bisaltes (Bisaltes) lingafelteri sp. nov., Trestonia skelleyi sp. nov. and Psapharochrus langeri sp. nov. from Bolivia; Eupogonius azteca sp. nov., Aegomorphus mexicanus sp. nov., Lamacoscylus albatus sp. nov., Lamacoscylus obscurus sp. nov. and Piruanycha wappesi sp. nov. from Mexico; Dolichestola egeri sp. nov. and Wappesellus cavus gen. nov., sp. nov. from Brazil (Rondônia); Scleronotus virgatus sp. nov. from Venezuela; Oreodera casariae sp. nov. from Panama; Alampyris bicolor sp. nov. from Costa Rica; and Emphytoeciosoma flava sp. nov. from Peru. Additionally, eleven new country/state records are established in Lamiinae: three for Peru; three for Bolivia; one for Mexico; one for Uruguay; and two for Brazil (Rondônia) (state records). Bisaltes (Bisaltes) lingafelteri, Eupogonius azteca, Aegomorphus mexicanus, Lamacoscylus albatus, Lamacoscylus obscurus, Piruanycha wappesi, Scleronotus virgatus, Alampyris bicolor, Emphytoeciosoma flava and Wappesellus are included in new or known keys.

Soil mites of the families Ascidae, Blattisociidae and Melicharidae (Acari: Mesostigmata) from mountainous areas of Colombia.

PubMed

Rueda-Ramírez, Diana; Varela, Amanda; Moraes, Gilberto J De

2016-06-24

Soil mites of the Ascidae sensu Lindquist & Evans (1965) are poorly known in Colombia. This group, presently represented by the families Ascidae sensu stricto, Blattisociidae and Melicharidae, contains species known to prey on small arthropods and nematodes, thus having the potential to be used for the control of soil pests. The aim of this study was to identify species of this group from a fragment of Andean forest and a nearby grassland at the municipality of La Calera, Cundinamarca Department, Colombia, at about 2800 m of elevation. Nine species were found, including five new species, namely Gamasellodes andinus sp. nov., Gamasellodes intermedius sp. nov., Protogamasellus caleraensis sp. nov., Cheiroseius mesae sp. nov. and Proctolaelaps colombianus sp. nov. Morphological characterisation of all the species and relevant soil characteristics of the sites where the mites were collected are presented.

Yeast communities in Sphagnum phyllosphere along the temperature-moisture ecocline in the boreal forest-swamp ecosystem and description of Candida sphagnicola sp. nov.

PubMed

Kachalkin, Aleksey V; Yurkov, Andrey M

2012-06-01

The effects of the temperature-moisture factors on the phylloplane yeast communities inhabiting Sphagnum mosses were studied along the transition from a boreal forest to a swamp biotope at the Central Forest State Biosphere Reserve (Tver region, Russia). We tested the hypothesis that microclimatic parameters affect yeast community composition and structure even on a rather small spatial scale. Using a conventional plating technique we isolated and identified by molecular methods a total of 15 species of yeasts. Total yeast counts and species richness values did not depend on environmental factors, although yeast community composition and structure did. On average, Sphagnum in the swamp biotope supported a more evenly structured yeast community. Relative abundance of ascomycetous yeasts was significantly higher on swamp moss. Rhodotorula mucilaginosa dominated in the spruce forest and Cryptococcus magnus was more abundant in the swamp. Our study confirmed the low occurrence of tremellaceous yeasts in the Sphagnum phyllosphere. Of the few isolated ascomycetous yeast and yeast-like species, some were differentiated from hitherto known species in physiological tests and phylogenetic analyses. We describe one of them as Candida sphagnicola and designate KBP Y-3887(T) (=CBS 11774(T) = VKPM Y-3566(T) = MUCL 53590(T)) as the type strain. The new species was registered in MycoBank under MB 563443.

Two new endangered species of Anomaloglossus (Anura: Aromobatidae) from Roraima State, northern Brazil.

PubMed

Fouquet, Antoine; Souza, Sergio Marques; Nunes, Pedro M Sales; Kok, Philippe J R; Curcio, Felipe Franco; De Carvalho, Celso Morato; Grant, Taran; Rodrigues, Miguel Trefaut

2015-03-05

We describe two new species of Anomaloglossus from Roraima State, Brazil, that are likely endemic to single mountains currently isolated among lowland forest and savanna ecosystems. The first species, Anomaloglossus tepequem sp. nov. was collected in 1986 and 1992 along a single stream at >500 m elevation on a tepui-like mountain named Tepequém, but was not detected during recent investigations. It is mainly diagnosed from other Anomaloglossus species by its well developed foot webbing, immaculate cream abdomen colouration and small body size (males: 18.2-20.1 mm, females: 21.7-24.5). The second species, Anomaloglossus apiau sp. nov. was found along several streams between 500 and 1400 m elevation on Serra do Apiaú, and is mainly diagnosed from congeners by its weakly webbed feet, males with swollen third finger and ventrolateral stripe formed by white dots, and its advertisement call; a long trill (up to almost 40 s) consisting of pairs of very short pulses. The discovery of these two apparently microendemic species suggests that additional Anomaloglossus species remain to be described in the Guiana Shield. Both species should be considered critically endangered given their seemingly reduced range size, association with highland habitat, and the anthropogenic pressure they currently face.

Cavities in trees around spring seeps in the maple-beech-birch forest type

Treesearch

Andrew B. Carey; William M. Healy

1981-01-01

We examined 913 trees of 15 species in the vicinity of eight spring seeps in a second-growth maple-beech-birch forest. We found that 18 percent of the trees had large dead limbs that indicated top rot. We found 37 cavities in 27 trees (3.0 percent). However, only seven cavities were being used by wildlife in September and mice (Peromyscus sp.) used...

Word-wide meta-analysis of Quercus forests ectomycorrhizal fungal diversity reveals southwestern Mexico as a hotspot.

PubMed

García-Guzmán, Olimpia Mariana; Garibay-Orijel, Roberto; Hernández, Edith; Arellano-Torres, Elsa; Oyama, Ken

2017-11-01

Quercus is the most diverse genus of ectomycorrhizal (ECM) host plants; it is distributed in the Northern and Southern Hemispheres, from temperate to tropical regions. However, their ECM communities have been scarcely studied in comparison to those of conifers. The objectives of this study were to determine the richness of ECM fungi associated with oak forests in the Cuitzeo basin in southwestern Mexico; and to determine the level of richness, potential endemism and species similarity among ECM fungal communities associated with natural oak forests worldwide through a meta-analysis. The ITS DNA sequences of ECM root tips from 14 studies were included in the meta-analysis. In total, 1065 species of ECM fungi have been documented worldwide; however, 812 species have been only found at one site. Oak forests in Europe contain 416 species, Mexico 307, USA 285, and China 151. Species with wider distributions are Sebacinaceae sp. SH197130, Amanita subjunquillea, Cenococcum geophilum, Cortinarius decipiens, Russula hortensis, R. risigallina, R. subrubescens, Sebacinaceae sp. SH214607, Tomentella ferruginea, and T. lapida. The meta-analysis revealed (1) that Mexico is not only a hotspot for oak species but also for their ECM mycobionts. (2) There is a particularly high diversity of ECM Pezizales in oak seasonal forests from western USA to southwestern Mexico. (3) The oak forests in southwestern Mexico have the largest number of potential endemic species. (4) Globally, there is a high turnover of ECM fungal species associated with oaks, which indicates high levels of alpha and beta diversity in these communities.

Revision of the genus Macrostomus Wiedemann (Diptera, Empididae, Empidinae). IV. The amazonensis species-group.

PubMed

Rafael, José Albertino; Cumming, Jeffrey M

2015-04-14

Six new species of Macrostomus Wiedemann are described, namely M. acreanus sp. nov. from Brazil (Acre state), M. amazonensis sp. nov. from Guyana and Brazil (Roraima, Amazonas, Pará, Rondônia, and Mato Grosso states), M. albicaudatus sp. nov. from Brazil (Roraima, Amazonas, and Pará states), M. paraiba sp. nov. from Brazil (Paraíba state), M. trombetensis sp. nov. from Brazil (Pará state) and M. xavieri sp. nov. from Guyana and Brazil (Amazonas state). The six species are all treated in the M. amazonensis species-group, which is defined on the basis of one pair of ocellar setae and no supra-alar postsutural setae in combination with characters of the male and female terminalia. A key to the included species is presented and the geographical distributions of the species are mapped.

Two new species of Leptogenys from southern Brazil (Hymenoptera: Formicidae).

PubMed

LÓpez-muÑoz, RomÁn A; Villarreal, Erick; Lattke, John E

2018-04-18

Two new species of ants belonging to the genus Leptogenys are described: L. academica n. sp., and L. carioca n. sp., both belonging to the crudelis group. The former species is known from the city of Curitiba while the other species occurs in montane forests of the Itatiaia Plateau. We provide descriptions based on the worker caste, images, as well as a modification of the key presently used for identifying the New World workers of Leptogenys.

Two new Bent-toed Geckos of the Cyrtodactylus pulchellus complex from Peninsular Malaysia and multiple instances of convergent adaptation to limestone forest ecosystems.

PubMed

Grismer, L Lee; Wood, Perry L; Anuar, Shahrul; Grismer, Marta S; Quah, Evan S H; Murdoch, Matthew L; Muin, Mohd Abdul; Davis, Hayden R; Aguilar, César; Klabacka, Randy; Cobos, Anthony J; Aowphol, Anchalee; Sites, Jack W

2016-04-25

A new species of limestone cave-adapted gecko of the Cyrtodactylus pulchellus complex, C. hidupselamanya sp. nov., is described from an isolated karst formation at Felda Chiku 7, Kelantan, Peninsular Malaysia. This formation is scheduled to be completely quarried for its mineral content. From what we know about the life history of C. hidupselamanya sp. nov., this will result in its extinction. A new limestone forest-adapted species, C. lenggongensis sp. nov., from the Lenggong Valley, Perak was previously considered to be conspecific with C. bintangrendah but a re-evaluation of morphological, color pattern, molecular, and habitat preference indicates that it too is a unique lineage worthy of specific recognition. Fortunately C. lenggongensis sp. nov. is not facing extinction because its habitat is protected by the UNESCO Archaeological Heritage of the Lenggong Valley due to the archaeological significance of that region. Both new species can be distinguished from all other species of Cyrtodactylus based on molecular evidence from the mitochondrial gene ND2 and its flanking tRNAs as well as having unique combinations of morphological and color pattern characteristics. Using a time-calibrated BEAST analysis we inferred that the evolution of a limestone habitat preference and its apparently attendant morphological and color pattern adaptations evolved independently at least four times in the C. pulchellus complex between 26.1 and 0.78 mya.

Evidences on the Ability of Mycorrhizal Genus Piloderma to Use Organic Nitrogen and Deliver It to Scots Pine

PubMed Central

Heinonsalo, Jussi; Sun, Hui; Santalahti, Minna; Bäcklund, Kirsi; Hari, Pertti; Pumpanen, Jukka

2015-01-01

Ectomycorrhizal (ECM) symbiosis has been proposed to link plant photosynthesis and soil organic matter (SOM) decomposition through the production of fungal enzymes which promote SOM degradation and nitrogen (N) uptake. However, laboratory and field evidence for the existence of these processes are rare. Piloderma sp., a common ECM genus in boreal forest soil, was chosen as model mycorrhiza for this study. The abundance of Piloderma sp. was studied in root tips and soil over one growing season and in winter. Protease production was measured from ectomycorrhiza and soil solution in the field and pure fungal cultures. We also tested the effect of Piloderma olivaceum on host plant organic N nutrition in the laboratory. The results showed that Piloderma sp. was highly abundant in the field and produced extracellular proteases, which correlated positively with the gross primary production, temperature and soil respiration. In the laboratory, Piloderma olivaceum could improve the ability of Pinus sylvestris L. to utilize N from extragenous proteins. We suggest that ECM fungi, although potentially retaining N in their hyphae, are important in forest C and N cycling due to their ability to access proteinaeous N. As Piloderma sp. abundance appeared to be seasonally highly variable, recycling of fungal-bound N after hyphal death may therefore be of primary importance for the N cycling in boreal ecosystems. PMID:26132469

Simulating stream response to floodplain connectivity, reforestation and wetland restoration from reach to catchment scales

NASA Astrophysics Data System (ADS)

Singh, N.; Bomblies, A.; Wemple, B. C.; Ricketts, T.

2017-12-01

Natural infrastructure (e.g., floodplains, forests) can offer multiple ecosystem services (ES), including flood resilience and water quality improvement. In order to maintain these ES, state, federal and non-profit organizations may consider various interventions, such as increased floodplain connectivity, reforestation, and wetland restoration to minimize flood peaks and erosion during events. However, the effect of these interventions on hydro-geomorphic responses of streams from reach to catchment scales (>100 km2) are rarely quantified. We used stream geomorphic assessment datasets with a hydraulic model to investigate the influence of above mentioned interventions on stream power (SP), water depth (WD) and channel velocity (VEL) during floods of 2yr and 100yr return periods for three catchments in the Lake Champlain basin, Vermont. To simulate the effect of forests and wetlands, we changed the Manning's coefficient in the model, and to simulate the increased connectivity of the floodplain, we edited the LIDAR data to lower bank elevations. We find that the wetland scenario resulted in the greatest decline in WD and SP, whereas forested scenario exhibited maximum reduction in VEL. The connectivity scenario showed a decline in almost all stream responses, but the magnitude of change was relatively smaller. On average, 35% (2yr) and 50% (100yr) of altered reaches demonstrated improvement over baseline, and 39% (2yr) and 31% (100yr) of altered reaches showed degradation over baseline, across all interventions. We also noted changes in stream response along unaltered reaches (>30%), where we did not make interventions. Overall, these results point to the complexity related to stream interventions and suggest careful evaluation of spatially explicit tradeoffs of these interventions on river-floodplain ecosystem. The proposed approach of simulating and understanding stream's response to interventions, prior to the implementation of restoration activities, may lead to more effective and efficient management of rivers.

Suicide rates and income in São Paulo and Brazil: a temporal and spatial epidemiologic analysis from 1996 to 2008

PubMed Central

2012-01-01

Background In a classical study, Durkheim noted a direct relation between suicide rates and wealth in the XIX century France. Since that time, several studies have verified this relationship. It is known that suicide rates are associated with income, although the direction of this association varies worldwide. Brazil presents a heterogeneous distribution of income and suicide across its territory; however, evaluation for an association between these variables has shown mixed results. We aimed to evaluate the relationship between suicide rates and income in Brazil, State of São Paulo (SP), and City of SP, considering geographical area and temporal trends. Methods Data were extracted from the National and State official statistics departments. Three socioeconomic areas were considered according to income, from the wealthiest (area 1) to the poorest (area 3). We also considered three regions: country-wide (27 Brazilian States and 558 Brazilian micro-regions), state-wide (645 counties of SP State), and city-wide (96 districts of SP city). Relative risks (RR) were calculated among areas 1, 2, and 3 for all regions, in a cross-sectional approach. Then, we used Joinpoint analysis to explore the temporal trends of suicide rates and SaTScan to investigate geographical clusters of high/low suicide rates across the territory. Results Suicide rates in Brazil, the State of SP, and the city of SP were 6.2, 6.6, and 5.4 per 100,000, respectively. Taking suicide rates of the poorest area (3) as reference, the RR for the wealthiest area was 1.64, 0.88, and 1.65 for Brazil, State of SP, and city of SP, respectively (p for trend <0.05 for all analyses). Spatial cluster of high suicide rates were identified at Brazilian southern (RR = 2.37), state of SP western (RR = 1.32), and city of SP central (RR = 1.65) regions. A direct association between income and suicide were found for Brazil (OR = 2.59) and the city of SP (OR = 1.07), and an inverse association for the state of SP (OR = 0.49). Conclusions Temporospatial analyses revealed higher suicide rates in wealthier areas in Brazil and the city of SP and in poorer areas in the State of SP. We further discuss the role of socioeconomic characteristics for explaining these discrepancies and the importance of our findings in public health policies. Similar studies in other Brazilian States and developing countries are warranted. PMID:22928689

Suicide rates and income in São Paulo and Brazil: a temporal and spatial epidemiologic analysis from 1996 to 2008.

PubMed

Bando, Daniel H; Brunoni, Andre R; Benseñor, Isabela M; Lotufo, Paulo A

2012-08-28

In a classical study, Durkheim noted a direct relation between suicide rates and wealth in the XIX century France. Since that time, several studies have verified this relationship. It is known that suicide rates are associated with income, although the direction of this association varies worldwide. Brazil presents a heterogeneous distribution of income and suicide across its territory; however, evaluation for an association between these variables has shown mixed results. We aimed to evaluate the relationship between suicide rates and income in Brazil, State of São Paulo (SP), and City of SP, considering geographical area and temporal trends. Data were extracted from the National and State official statistics departments. Three socioeconomic areas were considered according to income, from the wealthiest (area 1) to the poorest (area 3). We also considered three regions: country-wide (27 Brazilian States and 558 Brazilian micro-regions), state-wide (645 counties of SP State), and city-wide (96 districts of SP city). Relative risks (RR) were calculated among areas 1, 2, and 3 for all regions, in a cross-sectional approach. Then, we used Joinpoint analysis to explore the temporal trends of suicide rates and SaTScan to investigate geographical clusters of high/low suicide rates across the territory. Suicide rates in Brazil, the State of SP, and the city of SP were 6.2, 6.6, and 5.4 per 100,000, respectively. Taking suicide rates of the poorest area (3) as reference, the RR for the wealthiest area was 1.64, 0.88, and 1.65 for Brazil, State of SP, and city of SP, respectively (p for trend <0.05 for all analyses). Spatial cluster of high suicide rates were identified at Brazilian southern (RR = 2.37), state of SP western (RR = 1.32), and city of SP central (RR = 1.65) regions. A direct association between income and suicide were found for Brazil (OR = 2.59) and the city of SP (OR = 1.07), and an inverse association for the state of SP (OR = 0.49). Temporospatial analyses revealed higher suicide rates in wealthier areas in Brazil and the city of SP and in poorer areas in the State of SP. We further discuss the role of socioeconomic characteristics for explaining these discrepancies and the importance of our findings in public health policies. Similar studies in other Brazilian States and developing countries are warranted.

Effects of soil mechanical resistance on nematode community structure under conventional sugarcane and remaining of Atlantic Forest.

PubMed

de Oliveira Cardoso, Mércia; Pedrosa, Elvira M R; Rolim, Mário M; Silva, Enio F F E; de Barros, Patrícia A

2012-06-01

Nematodes present high potential as a biological indicator of soil quality. In this work, it was evaluated relations between soil physical properties and nematode community under sugarcane cropping and remaining of Atlantic Forest areas in Northeastern Pernambuco, Brazil. Soil samples were collected from September to November 2009 along two 200-m transects in both remaining of Atlantic Forest and sugarcane field at deeps of 0-10, 10-20, 20-30, 30-40, and 40-50 cm. For soil characterization, it was carried out analysis of soil size, water content, total porosity, bulk density, and particle density. The level of soil mechanical resistance was evaluated through a digital penetrometer. Nematodes were extracted per 300 cm(3) of soil through centrifugal flotation in sucrose being quantified, classified according trophic habit, and identified in level of genus or family. Data were analyzed using Pearson correlation at 5% of probability. Geostatistical analysis showed that the penetration resistance, water content, total porosity, and bulk density on both forest and cultivated area exhibited spatial dependence at the sampled scale, and their experimental semivariograms were fitted to spherical and exponential models. In forest area, the ectoparasites and free-living nematodes exhibited spherical model. In sugarcane field, the soil nematodes exhibited pure nugget effect. Pratylenchus sp. and Helicotylenchus sp. were prevalent in sugarcane field, but in forest, there was prevalence of Dorylaimidae and Rhabditidae. Total amount of nematode did not differ between environments; however, community trophic structure in forest presented prevalence of free-living nematodes: omnivores followed by bacterial-feeding soil nematodes, while plant-feeding nematodes were prevalent in sugarcane field. The nematode diversity was higher in the remaining of Atlantic Forest. However, the soil mechanical resistance was higher under sugarcane cropping, affecting more directly the free-living nematodes; especially Dorylaimidae which was the most sensible to changes in soil physical properties.

Structural Characterization of New Peptide Variants Produced by Cyanobacteria from the Brazilian Atlantic Coastal Forest Using Liquid Chromatography Coupled to Quadrupole Time-of-Flight Tandem Mass Spectrometry

PubMed Central

Sanz, Miriam; Andreote, Ana Paula Dini; Fiore, Marli Fatima; Dörr, Felipe Augusto; Pinto, Ernani

2015-01-01

Cyanobacteria from underexplored and extreme habitats are attracting increasing attention in the search for new bioactive substances. However, cyanobacterial communities from tropical and subtropical regions are still largely unknown, especially with respect to metabolite production. Among the structurally diverse secondary metabolites produced by these organisms, peptides are by far the most frequently described structures. In this work, liquid chromatography/electrospray ionization coupled to high resolution quadrupole time-of-flight tandem mass spectrometry with positive ion detection was applied to study the peptide profile of a group of cyanobacteria isolated from the Southeastern Brazilian coastal forest. A total of 38 peptides belonging to three different families (anabaenopeptins, aeruginosins, and cyanopeptolins) were detected in the extracts. Of the 38 peptides, 37 were detected here for the first time. New structural features were proposed based on mass accuracy data and isotopic patterns derived from full scan and MS/MS spectra. Interestingly, of the 40 surveyed strains only nine were confirmed to be peptide producers; all of these strains belonged to the order Nostocales (three Nostoc sp., two Desmonostoc sp. and four Brasilonema sp.). PMID:26096276

Description of Neoperla yingshana sp. nov. (Plecoptera: Perlidae) from Hubei Province of China.

PubMed

Chen, Zhi-Teng; DU, Yu-Zhou

2017-12-05

A new species of the genus Neoperla (Plecoptera, Perlidae), N. yingshana Chen & Du sp. nov. from the Wujiashan National Forest Park, Hubei Province of central China is described, illustrated and compared with similar taxa. The new species is characterized by the aedeagal tube long with an upcurved, finger-like spinulose lobe subapically, and by the aedeagal sac plump, gradually tapering to a blunt tip with dense spinules on ventral surface and granules surrounding sac apex.

Septoria hodgesii sp. nov.: A potential biocontrol agent for Myrica faya in Hawai‘i

USGS Publications Warehouse

Gardner, Donald E.

1999-01-01

Septoria hodgesii sp. nov. is described. This fungus is a common leaf pathogen of Myrica cerifera in the southeastern U.S., where it usually has been identified as S. myricae. It also has been shown by artificial inoculation to be pathogenic on M. faya, an introduced forest weed in Hawai'i. Comparison of S. hodgesii with the types of S. myricae, from M. cerifera and S. myricata, from M. gale, showes it to be distinct from both species.

The phlebotomine sandflies of Venezuelan Amazonia.

PubMed

Feliciangeli, M D; Ramirez Perez, J; Ramirez, A

1988-01-01

Phlebotomine sandflies were surveyed in two ecologically contrasted areas, the northern moist and southern wet tropical forests, of the Territorio Federal Amazonas, Venezuela. Three new taxa and twenty-one new records were added to the previously known species list for Venezuelan sandflies, which now totals eighty species. Both sexes of Lutzomyia (Psychodopygus) killicki sp.n., L. (Trichophoryomyia) bettinii sp.n., L. (Nyssomyia) olmeca reducta subsp.n. and and the females of L. bernalei Osorno et al., Brumptomyia pintoi Costa Lima and L. begonae (Ortiz & Torres) are described and illustrated.

Descriptions of seven new Acrogonia species from South America (Hemiptera: Cicadellidae: Cicadellinae: Proconiini).

PubMed

Da Silva, Roberta Dos Santos; Cavichioli, Rodney R; Takiya, Daniela M; Mejdalani, Gabriel

2018-01-18

Seven new species of the economically important sharpshooter genus Acrogonia Stål are described and illustrated: A. falcata sp. nov. (French Guiana and state of Amazonas, Brazil), A. felixi sp. nov. (department of Loreto, Peru), A. quintasi sp. nov. (state of Pará, Brazil), A. distincta sp. nov. (state of Amazonas, Brazil), A. dentata sp. nov. (department of San Martin in Peru, French Guiana, and states of Amazonas, Mato Grosso, Pará, and Rondônia in Brazil), A. luizi sp. nov. (province of Pastaza in Ecuador and state of Amazonas in Brazil), and A. lobulata sp. nov. (province of Orellana, Ecuador). In addition to the external morphology, color pattern, and male genitalia, detailed descriptions and illustrations of the female genitalia are provided for three of the new species (A. dentata, A. luizi, and A. lobulata). Females of the other four new species are unknown. Acrogonia includes now 39 species, being among the most species-rich genera of the Proconiini.

Biodiversity of oribatid mites (Acari: Oribatida) along an altitudinal gradient in the Central Alps.

PubMed

Fischer, Barbara M; Schatz, Heinrich

2013-01-01

Oribatid mite communities were studied in the Central Alps (Obergurgl, Tyrol, Austria). Samples were taken on four sites along an altitudinal gradient from 2050 m a.s.l to 2900 m a.s.l., in different vegetation units (pine forest, Nardetum, Caricetum, Androsacetum). A total of 86 species were found, most of them occurred only at one altitude, four species were found in all four study sites. Three taxa could not be ascribed to a certain species (Carabodes sp. Mycobates sp., Tectocepheus sp.). Species richness and density of oribatid mites decrease with increasing altitude. The results are compared with previous studies in the same region and show remarkable shifts in species composition.

Spatial distribution of Madeira Island Laurisilva endemic spiders (Arachnida: Araneae)

PubMed Central

2014-01-01

Abstract Madeira island presents a unique spider diversity with a high number of endemic species, many of which are still poorly known. A recent biodiversity survey on the terrestrial arthropods of the native forest, Laurisilva, provided a large set of standardized samples from various patches throughout the island. Out of the fifty two species recorded, approximately 33.3% are Madeiran endemics, many of which had not been collected since their original description. Two new species to science are reported – Ceratinopsis n. sp. and Theridion n. sp. – and the first records of Poeciloneta variegata (Blackwall, 1841) and Tetragnatha intermedia Kulczynski, 1891 are reported for the first time for Madeira island. Considerations on species richness and abundance from different Laurisilva locations are presented, together with distribution maps for endemic species. These results contribute to a better understanding of spider diversity patterns and endemic species distribution in the native forest of Madeira island. PMID:24855443

Two new species of Cyrtodactylus (Squamata: Gekkonidae) from the karst forest of Hoa Binh Province, Vietnam.

PubMed

Nguyen, Truong Quang; Le, Minh Duc; Pham, Anh Van; Ngo, Hai Ngoc; Hoang, Chung Van; Ziegler, Thomas

2015-07-13

We describe two new species of the genus Cyrtodactylus on the basis of a new reptile collection from the limestone karst forest of Hoa Binh Province, northwestern Vietnam. Cyrtodactylus otai sp. nov. from Hang Kia-Pa Co Nature Reserve and Cyrtodactylus bobrovi sp. nov. from Ngoc Son-Ngo Luong Nature Reserve can be distinguished from each other and from their congeners by their genetic distinction and morphological differences in number of precloacal pores, femoral scales, ventral scales, lamellae, subcaudals and dorsal tubercle arrangement, as well as in size and color pattern. In phylogenetic analyses, both new species are nested in a clade containing taxa from northwestern and northcentral Vietnam and northern Laos, i.e., C. bichnganae and C. cf. martini from northwestern Vietnam, C. puhuensis from northcentral Vietnam, and C. spelaeus, C. vilaphongi, and C. wayakonei from northern Laos.

Hyboptera Chaudoir, 1872 of the Cryptobatida group of subtribe Agrina: A taxonomic revision with notes on their ways of life (Insecta, Coleoptera, Carabidae, Lebiini)

PubMed Central

Erwin, Terry L.; Henry, Shasta C.

2017-01-01

Abstract Hyboptera Chaudoir, 1872 of the Cryptobatida group of subtribe Agrina, Lebiini, living in the Neotropics and southernmost Nearctic realms are diagnosed, described, and illustrated, and new species are assigned to two inclusive species groups. Occurrences of species range from Texas, USA, to the state of Santa Caterina in Brazil. Seven new species of Hyboptera are described: Hyboptera biolat Erwin & Henry, sp. n.; Type locality – Perú, Madre de Dios, Manu Reserved Zone, Río Manu, BIOLAT Biological Station, Pakitza; Hyboptera vestiverdis Henry & Erwin, sp. n.; Type locality – Perú, Madre de Dios, Manu Reserved Zone, Río Manu, BIOLAT Biological Station, Pakitza; Hyboptera lucida Henry & Erwin, sp. n.; Type locality – French Guiana, Cayenne, Commune de Roura, Montagne des Chevaux; Hyboptera scheelea Erwin & Henry, sp. n.; Type locality – Perú, Loreto, Pacaya-Samiria National Reserve, Río Samiria (South Branch), Camp Terry; Hyboptera shasta Erwin, sp. n.; Type locality – Brazil, Amazonas, north of Manaus on Amazonas 010 at Km 26, Reserva Ducke; Hyboptera tepui Erwin & Henry, sp. n.; Type locality – Venezuela, Amazonas, Cerro de la Neblina, Río Baria Basecamp; Hyboptera tiputini Erwin & Henry, sp. n.; Type locality – Ecuador, Orellana, Yasuni National Park (edge), 95.43 km E (heading 101.46°) Coca, Tiputini Biodiversity Station. A revised identification key is provided to the genera of the Cryptobatida group and another to the species of Hyboptera Chaudoir and distributional data are provided for all known species of the latter. Adults of these species often occur in the canopy of many tropical tree species and records are reported where known. In addition, adults are found under the webbing of Psocoptera and in fleshy anther rings of Bombacaceae (Pseudobombax septenatum (Jacq.) Dugand), on the rain forest floor in the dry season. Larval and pupal stages of one species from Panamá are known from under bark of living fence posts; however, these immature stages are not treated in the current paper. PMID:29290701

Studies on endoparasites of the black bear (Ursus americanus) in the southeastern United States.

PubMed

Crum, J M; Nettles, V F; Davidson, W R

1978-04-01

Examination of 53 black bears (Ursus americanus) from six states in the southeastern United States revealed at least 17 species of endoparasites, including Sarcocystis sp., Spirometra mansonoides (spargana), Macracanthorhynchus ingens, Ancylostoma caninum, Arthrocephalus lotoris, Baylisascaris transfuga, Capillaria aerophila, Capillaria putorii, Crenosoma sp., Cyathospirura sp., Dirofilaria immitis, Gnathostoma sp., Gongylonema pulchrum, microfilariae, Molineus barbatus, Physaloptera sp. and Strongyloides sp. Twelve of these represent new host records for black bear, and two are considered to be new species. Data are presented on prevalence, intensity and geographic distribution of each species. Pathologic effects were associated with infections of spargana of S. mansonoides and adults of C. aerophilia.

The amazing diversity of the genus Monospilus Sars, 1862 (Crustacea: Branchiopoda: Aloninae) in South America.

PubMed

Sousa, Francisco Diogo R; Elmoor-Loureiro, Lourdes M A; Panarelli, Eliana A

2017-03-13

The main goal of this paper is to describe three new species of the genus Monospilus Sars, 1862 (Crustacea: Cladocera). Monospilus macroerosus sp. nov. differs from other species of the genus in several peculiar morphological traits, the most striking being the presence of a saw-shaped pecten of teeth on the postabdominal claw. This species inhabits semiterrestrial habitats (wet leaf litter on hydromorphic soil from gallery forest), exhibiting adaptations related to movement and food handling in this type of habitat. Monospilus brachyspinus sp. nov. inhabits truly aquatic habitats, where lives being associated with macrophytes and submerged leaves. It may be recognized by the postabdominal claw, which is armed with proximal spinulae modified in a short spine. In Monospilus sp., the proximal spinulae are modified in a long and slender spine. So far, Monospilus sp. occurs in southern South America, while Monospilus macroerosus sp. nov. and Monospilus brachyspinus sp. nov. occur in the Cerrado biome in Brazil, in the central portion of South America. Some conclusions about the conservation status of new species also are made.

The use of Proline (Prothioconazole) to control pitch canker, Rhizoctonia foliage blight, and Fusiform rust in forest seedling nurseries and efforts to acquire registration

Treesearch

Tom E. Starkey; Scott A. Enebak

2011-01-01

Laboratory, greenhouse, and field trials have shown Proline® to be efficacious against three fungal pathogens that cause damage and seedling mortality in forest seedling nurseries. Disease control using Proline® has been obtained at 365 ml/ha (5 fl oz/ac) for the control of fusiform rust (Cronartium quercuum f.sp. fusiforme) on loblolly pine (Pinus taeda) in both...

Analysis of Chromobacterium sp. natural isolates from different Brazilian ecosystems

PubMed Central

Lima-Bittencourt, Cláudia I; Astolfi-Filho, Spartaco; Chartone-Souza, Edmar; Santos, Fabrício R; Nascimento, Andréa MA

2007-01-01

Background Chromobacterium violaceum is a free-living bacterium able to survive under diverse environmental conditions. In this study we evaluate the genetic and physiological diversity of Chromobacterium sp. isolates from three Brazilian ecosystems: Brazilian Savannah (Cerrado), Atlantic Rain Forest and Amazon Rain Forest. We have analyzed the diversity with molecular approaches (16S rRNA gene sequences and amplified ribosomal DNA restriction analysis) and phenotypic surveys of antibiotic resistance and biochemistry profiles. Results In general, the clusters based on physiological profiles included isolates from two or more geographical locations indicating that they are not restricted to a single ecosystem. The isolates from Brazilian Savannah presented greater physiologic diversity and their biochemical profile was the most variable of all groupings. The isolates recovered from Amazon and Atlantic Rain Forests presented the most similar biochemical characteristics to the Chromobacterium violaceum ATCC 12472 strain. Clusters based on biochemical profiles were congruent with clusters obtained by the 16S rRNA gene tree. According to the phylogenetic analyses, isolates from the Amazon Rain Forest and Savannah displayed a closer relationship to the Chromobacterium violaceum ATCC 12472. Furthermore, 16S rRNA gene tree revealed a good correlation between phylogenetic clustering and geographic origin. Conclusion The physiological analyses clearly demonstrate the high biochemical versatility found in the C. violaceum genome and molecular methods allowed to detect the intra and inter-population diversity of isolates from three Brazilian ecosystems. PMID:17584942

Two new species of Phrynopus (Anura, Strabomantidae) from high elevations in the Yanachaga-Chemillén National park in Peru (Departamento de Pasco)

PubMed Central

Lehr, Edgar; Moravec, Jiří; Cusi, Juan Carlos

2012-01-01

Abstract We describe two new species of Phrynopus from a cloud forest of the Cordillera Yanachaga, Yanachaga-Chemillén National Park in Peru and describe and document the first clutch and case of parental care for a species of Phrynopus. One of the new species of Phrynopus is described based on two females (SVL 19.1–21.0 mm) which were found in leaf litter and moss layer in a cloud forest at 2900 m elevation. This new species is most similar to Phrynopus bracki. The second new species of Phrynopus was found in the transitional formation between cloud forest and wet puna at 3000 m elevation. Its description is based on a single female (SVL 20.7 mm) that was observed guarding nine eggs under moss. This new species is most similar to Phrynopus nicoleae. The eggs had a diameter of 5.7–5.8 mm (n = 3) and froglets when hatched a SVL of 6.2–6.5 mm (n = 3). Sympatric anurans include Gastrotheca sp., Pristimantis aniptopalmatus, Pristimantis bromeliaceus, Pristimantis sp., and Rhinella yanachaga. PMID:23226963

A NEW SPECIES OF MEMNONIELLA

EPA Science Inventory

A new species, Stachybotrys longistipitata sp. nov is described and illustrated. This fungus was originally isolated from forest soil in Japan and deposited as Memnoniella subsimplex.

Introduction

Four species have been described in the mitosporic genus Memnoniella ...

Burkholderia humisilvae sp. nov., Burkholderia solisilvae sp. nov. and Burkholderia rhizosphaerae sp. nov., isolated from forest soil and rhizosphere soil.

PubMed

Lee, Jae-Chan; Whang, Kyung-Sook

2015-09-01

Strains Y-12(T) and Y-47(T) were isolated from mountain forest soil and strain WR43(T) was isolated from rhizosphere soil, at Daejeon, Korea. The three strains grew at 10-55 °C (optimal growth at 28-30 °C), at pH 3.0-8.0 (optimal growth at pH 6.0) and in the presence of 0-4.0% (w/v) NaCl, growing optimally in the absence of added NaCl. On the basis of 16S rRNA gene sequence analysis, the three strains were found to belong to the genus Burkholderia, showing the closest phylogenetic similarity to Burkholderia diazotrophica JPY461(T) (97.2-97.7%); the similarity between the three sequences ranged from 98.3 to 98.7%. Additionally, the three strains formed a distinct group in phylogenetic trees based on the housekeeping genes recA and gyrB. The predominant ubiquinone was Q-8, the major fatty acids were C16 : 0 and C17  : 0 cyclo and the DNA G+C content of the novel isolates was 61.6-64.4 mol%. DNA-DNA relatedness among the three strains and the type strains of the closest species of the genus Burkholderia was less than 50%. On the basis of 16S rRNA, recA and gyrB gene sequence similarities, chemotaxonomic and phenotypic data, the three strains represent three novel species within the genus Burkholderia, for which the names Burkholderia humisilvae sp. nov. (type strain Y-12(T)= KACC 17601(T) = NBRC 109933(T) = NCAIM B 02543(T)), Burkholderia solisilvae sp. nov. (type strain Y-47(T) = KACC 17602(T)= NBRC 109934(T) = NCAIM B 02539(T)) and Burkholderia rhizosphaerae sp. nov. (type strain WR43(T) = KACC 17603(T) = NBRC 109935(T) = NCAIM B 02541(T)) are proposed.

The effect of different growth regimes on the endophytic bacterial communities of the fern, Dicksonia sellowiana hook (Dicksoniaceae).

PubMed

de Araújo Barros, Irene; Luiz Araújo, Welington; Lúcio Azevedo, João

2010-10-01

Endophytic bacteria associated with the fern Dicksonia sellowiana were investigated. The bacterial communities from the surface-sterilized pinnae and rachis segments of the plants from the Brazilian Atlantic Rainforest that grew in native field conditions were compared with the bacterial communities from plants grown in greenhouses and plants that were initially grown in greenhouses and then transferred to the forest. From 540 pinnae and 540 rachis segments, 163 (30.2%) and 346 (64.2%) were colonized by bacteria, respectively. The main bacterial genera and species that were isolated included Bacillus spp. ( B. cereus, B. megaterium, B. pumilus and B. subtilis ) , Paenibacillus sp. , Amphibacillus sp. , Gracilibacillus sp. , Micrococcus sp. and Stenotrophomonas spp. ( S. maltophilia and S. nitroreducens ). B. pumilus was the most frequently isolated bacterial species . Amphibacillus and Gracilibacillus were reported as endophytes for the first time. Other commonly found bacterial genera were not observed in D. sellowiana , which may reflect preferences of specific bacterial communities inside this fern or detection limitations due to the isolation procedures. Plants that were grown in greenhouses and plants that were reintroduced into the forest displayed more bacterial genera and species diversity than native field plants, suggesting that reintroduction shifts the bacterial diversity. Endophytic bacteria that displayed antagonistic properties against different microorganisms were detected, but no obvious correlation was found between their frequencies with plant tissues or with plants from different growth regimes. This paper reports the first isolation of endophytic bacteria from a fern.

The effect of different growth regimes on the endophytic bacterial communities of the fern, Dicksonia sellowiana hook (Dicksoniaceae)

PubMed Central

de Araújo Barros, Irene; Luiz Araújo, Welington; Lúcio Azevedo, João

2010-01-01

Endophytic bacteria associated with the fern Dicksonia sellowiana were investigated. The bacterial communities from the surface-sterilized pinnae and rachis segments of the plants from the Brazilian Atlantic Rainforest that grew in native field conditions were compared with the bacterial communities from plants grown in greenhouses and plants that were initially grown in greenhouses and then transferred to the forest. From 540 pinnae and 540 rachis segments, 163 (30.2%) and 346 (64.2%) were colonized by bacteria, respectively. The main bacterial genera and species that were isolated included Bacillus spp. ( B. cereus, B. megaterium, B. pumilus and B. subtilis ) , Paenibacillus sp. , Amphibacillus sp. , Gracilibacillus sp. , Micrococcus sp. and Stenotrophomonas spp. ( S. maltophilia and S. nitroreducens ). B. pumilus was the most frequently isolated bacterial species . Amphibacillus and Gracilibacillus were reported as endophytes for the first time. Other commonly found bacterial genera were not observed in D. sellowiana , which may reflect preferences of specific bacterial communities inside this fern or detection limitations due to the isolation procedures. Plants that were grown in greenhouses and plants that were reintroduced into the forest displayed more bacterial genera and species diversity than native field plants, suggesting that reintroduction shifts the bacterial diversity. Endophytic bacteria that displayed antagonistic properties against different microorganisms were detected, but no obvious correlation was found between their frequencies with plant tissues or with plants from different growth regimes. This paper reports the first isolation of endophytic bacteria from a fern. PMID:24031575

Candida dajiaensis sp. nov., Candida yuanshanicus sp. nov., Candida jianshihensis sp. nov., and Candida sanyiensis sp. nov., four anamorphic, ascomycetous yeast species isolated from soil in Taiwan.

PubMed

Liu, Chun-Hao; Young, Shuh-Sen; Chang, Tsung-Chain; Lee, Ching-Fu

2008-08-01

Nine anamorphic, ascomycetous yeast strains belonging to the Pichia anomala clade were recovered from forest soil in 2006 in Taiwan. The nine yeast strains represent four novel yeast species based on the sequences of their D1/D2 domain of the large subunit (LSU) rRNA gene and their physiological characteristics. The scientific names of Candida dajiaensis sp. nov., Candida yuanshanicus sp. nov., Candida jianshihensis sp. nov., and Candida sanyiensis sp. nov. are proposed for these novel yeast species. The type strains are C. dajiaensis SM11S03(T) (=CBS 10590(T)=BCRC 23099(T)), C. yuanshanicus SY3S02(T) (=CBS 10589(T)=BCRC 23100(T)), C. jianshihensis SM8S04(T) (=CBS 10591(T)=BCRC 23096(T)), and C. sanyiensis SA1S06(T) (=CBS 10592(T)=BCRC 23094(T)). Sequence analysis of the D1/D2 of the LSU rRNA gene revealed that the three species, C. dajiaensis, C. yuanshanicus and Pichia onychis, shared a separate branch in the phylogenetic tree, C. jianshihensis is phylogenetically related to Candida ulmi and Pichia alni, and the phylogenetically closest relative of C. sanyiensis is Pichia populi.

Rapid forest clearing in a Myanmar proposed national park threatens two newly discovered species of geckos (Gekkonidae: Cyrtodactylus)

PubMed Central

Oswald, Patrick; Thura, Myint Kyaw; LaJeunesse Connette, Katherine J.; Grindley, Mark E.; Songer, Melissa; Zug, George R.; Mulcahy, Daniel G.

2017-01-01

Myanmar’s recent transition from military rule towards a more democratic government has largely ended decades of political and economic isolation. Although Myanmar remains heavily forested, increased development in recent years has been accompanied by exceptionally high rates of forest loss. In this study, we document the rapid progression of deforestation in and around the proposed Lenya National Park, which includes some of the largest remaining areas of lowland evergreen rainforest in mainland Southeast Asia. The globally unique forests in this area are rich in biodiversity and remain a critical stronghold for many threatened and endangered species, including large charismatic fauna such as tiger and Asian elephant. We also conducted a rapid assessment survey of the herpetofauna of the proposed national park, which resulted in the discovery of two new species of bent-toed geckos, genus Cyrtodactylus. We describe these new species, C. lenya sp. nov. and C. payarhtanensis sp. nov., which were found in association with karst (i.e., limestone) rock formations within mature lowland wet evergreen forest. The two species were discovered less than 35 km apart and are each known from only a single locality. Because of the isolated nature of the karst formations in the proposed Lenya National Park, these geckos likely have geographical ranges restricted to the proposed protected area and are threatened by approaching deforestation. Although lowland evergreen rainforest has vanished from most of continental Southeast Asia, Myanmar can still take decisive action to preserve one of the most biodiverse places on Earth. PMID:28403189

Disentangling the diversity of arboreal ant communities in tropical forest trees.

PubMed

Klimes, Petr; Fibich, Pavel; Idigel, Cliffson; Rimandai, Maling

2015-01-01

Tropical canopies are known for their high abundance and diversity of ants. However, the factors which enable coexistence of so many species in trees, and in particular, the role of foragers in determining local diversity, are not well understood. We censused nesting and foraging arboreal ant communities in two 0.32 ha plots of primary and secondary lowland rainforest in New Guinea and explored their species diversity and composition. Null models were used to test if the records of species foraging (but not nesting) in a tree were dependent on the spatial distribution of nests in surrounding trees. In total, 102 ant species from 389 trees occurred in the primary plot compared with only 50 species from 295 trees in the secondary forest plot. However, there was only a small difference in mean ant richness per tree between primary and secondary forest (3.8 and 3.3 sp. respectively) and considerably lower richness per tree was found only when nests were considered (1.5 sp. in both forests). About half of foraging individuals collected in a tree belonged to species which were not nesting in that tree. Null models showed that the ants foraging but not nesting in a tree are more likely to nest in nearby trees than would be expected at random. The effects of both forest stage and tree size traits were similar regardless of whether only foragers, only nests, or both datasets combined were considered. However, relative abundance distributions of species differed between foraging and nesting communities. The primary forest plot was dominated by native ant species, whereas invasive species were common in secondary forest. This study demonstrates the high contribution of foragers to arboreal ant diversity, indicating an important role of connectivity between trees, and also highlights the importance of primary vegetation for the conservation of native ant communities.

Disentangling the Diversity of Arboreal Ant Communities in Tropical Forest Trees

PubMed Central

Klimes, Petr; Fibich, Pavel; Idigel, Cliffson; Rimandai, Maling

2015-01-01

Tropical canopies are known for their high abundance and diversity of ants. However, the factors which enable coexistence of so many species in trees, and in particular, the role of foragers in determining local diversity, are not well understood. We censused nesting and foraging arboreal ant communities in two 0.32 ha plots of primary and secondary lowland rainforest in New Guinea and explored their species diversity and composition. Null models were used to test if the records of species foraging (but not nesting) in a tree were dependent on the spatial distribution of nests in surrounding trees. In total, 102 ant species from 389 trees occurred in the primary plot compared with only 50 species from 295 trees in the secondary forest plot. However, there was only a small difference in mean ant richness per tree between primary and secondary forest (3.8 and 3.3 sp. respectively) and considerably lower richness per tree was found only when nests were considered (1.5 sp. in both forests). About half of foraging individuals collected in a tree belonged to species which were not nesting in that tree. Null models showed that the ants foraging but not nesting in a tree are more likely to nest in nearby trees than would be expected at random. The effects of both forest stage and tree size traits were similar regardless of whether only foragers, only nests, or both datasets combined were considered. However, relative abundance distributions of species differed between foraging and nesting communities. The primary forest plot was dominated by native ant species, whereas invasive species were common in secondary forest. This study demonstrates the high contribution of foragers to arboreal ant diversity, indicating an important role of connectivity between trees, and also highlights the importance of primary vegetation for the conservation of native ant communities. PMID:25714831

Hieracium sinoaestivum (Asteraceae), a new species from North China

PubMed Central

Sennikov, Alexander N.

2014-01-01

Abstract Hieracium sinoaestivum Sennikov sp. nov. is described as new to science and illustrated. This presumably apomictic species is solely known from two old collections made in a single locality in the Shanxi Province of China. It belongs to the hybridogenous group Hieracium sect. Aestiva (Hieracium sect. Prenanthoidea × Hieracium sect. Umbellata) and is most similar to Hieracium veresczaginii from southern Siberia. The new species occurs at low altitudes in the forest belt of Lülian Mts. and belongs to taiga forest elements. PMID:25197222

First fossil representatives of Pharaxonothinae Crowson (Coleoptera: Erotylidae): indirect evidence for cycads existence in Baltic amber forest.

PubMed

Alekseev, Vitalii I; Bukejs, Andris

2017-10-19

A new species of Erotylidae, Cycadophila (s. str.) mumia sp. nov., the first fossil representative of the subfamily Pharaxo-nothinae, is described and illustrated from Eocene Baltic amber. A second closely related specimen is reported but not described as new due to poor preservation in amber. The occurrence of representatives of the Recent cycad-specialized genus in Baltic amber can indirectly indicate the presence of their host plants (Cycadales: Cycadophyta: Cycadopsida) in the Eocene amber forest.

Sarcodon in the Neotropics I: new species from Guyana, Puerto Rico and Belize

Treesearch

A. C. Grupe; A. D. Baker; J. K. Uehling; M. E. Smith; T. J. Baroni; D. J. Lodge; T. W. Henkel

2015-01-01

Four species of the ectomycorrhizal (ECM) genus Sarcodon (Bankeraceae, Thelephorales, Basidiomycota) are described as new to science. Sarcodon pakaraimensis sp. nov. is described from forests dominated by the ECM trees Pakaraimaea dipterocarpacea (Dipterocarpaceae) and Dicymbe jenmanii (...

The six-eyed sand spiders of the genus Sicarius (Araneae: Haplogynae: Sicariidae) from the Brazilian Caatinga.

PubMed

Magalhães, Ivan L F; Brescovit, Antonio D; Santos, Adalberto J

2013-01-04

In this paper we revise the species of Sicarius (Araneae: Sicariidae) from the Brazilian Caatinga, the largest tropical dry forest nucleus in the world. We redescribe, designate a neotype and provide new records for Sicarius tropicus (Mello- Leitão, 1936), the only species previously known from the region, and describe three new species: S. cariri n. sp., S. diadorim n. sp. and S. ornatus n. sp. We report high intraspecific variation in the genitalic morphology of these species, especially in females. We also provide anecdotal observations on natural history and behavior of these species, including diet, mating behavior and clutch size. We include an identification key for Brazilian Caatinga species of Sicarius.

Antiproliferative Cardenolides of an Elaeodendron sp. from the Madagascar Rain Forest

PubMed Central

Cao, Shugeng; Brodie, Peggy J.; Miller, James S.; Ratovoson, Fidy; Callmander, Martin W.; Randrianasolo, Sennen; Rakotobe, Etienne; Rasamison, Vincent E.; Suh, Edward M.; TenDyke, Karen; Kingston, David G. I.

2008-01-01

Bioassay-guided fractionation of an ethanol extract obtained from the Madagascar plant Elaeodendron sp. led to the isolation of two new cardenolides, elaeodendrosides T and U (1 and 2). The structures of the new compounds were elucidated using 1D and 2D NMR experiments, and mass spectrometry. Compounds 1, 3, 4, and 5 showed significant antiproliferative activity against A2780 human ovarian cancer cells with IC50 values of 0.085, 0.019, 0.19, and 0.10 µM, respectively, while compounds 2 and 6 were less active. PMID:17547460

Cordulegaster virginiae sp. nov. from Mexico, including a comparison with C. diadema Selys, 1868, and a redescription of its larva (Odonata: Cordulegastridae).

PubMed

Novelo-gutiÉrrez, Rodolfo

2018-03-14

Cordulegaster virginiae sp. nov. is described based on eight adults (7 males, 1 female) collected in cloud forest in municipalities of Banderilla and Xalapa, Veracruz, Mexico. The new species is compared with adults of C. diadema Selys, 1868. All the structural differences between both species are located on the abdomen. Cordulegaster godmani McLachlan, 1876 is considered a junior synonym of C. diadema. The larva of C. diadema is redescribed and illustrated in detail based on reared material.

Penicillium araracuarense sp. nov., Penicillium elleniae sp. nov., Penicillium penarojense sp. nov., Penicillium vanderhammenii sp. nov. and Penicillium wotroi sp. nov., isolated from leaf litter.

PubMed

Houbraken, Jos; López-Quintero, Carlos A; Frisvad, Jens C; Boekhout, Teun; Theelen, Bart; Franco-Molano, Ana Esperanza; Samson, Robert A

2011-06-01

Several species of the genus Penicillium were isolated during a survey of the mycobiota of leaf litter and soil in Colombian Amazon forest. Five species, Penicillium penarojense sp. nov. (type strain CBS 113178(T) = IBT 23262(T)), Penicillium wotroi sp. nov. (type strain CBS 118171(T) = IBT 23253(T)), Penicillium araracuarense sp. nov. (type strain CBS 113149(T) = IBT 23247(T)), Penicillium elleniae sp. nov. (type strain CBS 118135(T) = IBT 23229(T)) and Penicillium vanderhammenii sp. nov. (type strain CBS 126216(T) = IBT 23203(T)) are described here as novel species. Their taxonomic novelty was determined using a polyphasic approach, combining phenotypic, molecular (ITS and partial β-tubulin sequences) and extrolite data. Phylogenetic analyses showed that each novel species formed a unique clade for both loci analysed and that they were most closely related to Penicillium simplicissimum, Penicillium janthinellum, Penicillium daleae and Penicillium brasilianum. An overview of the phylogeny of this taxonomically difficult group is presented, and 33 species are accepted. Each of the five novel species had a unique extrolite profile of known and uncharacterized metabolites and various compounds, such as penicillic acid, andrastin A, pulvilloric acid, paxillin, paspaline and janthitrem, were commonly produced by these phylogenetically related species. The novel species had a high growth rate on agar media, but could be distinguished from each other by several macro- and microscopical characteristics.

Study of the principal constituents of tropical angico (Anadenanthera sp.) honey from the atlantic forest.

PubMed

Santos, A; Moreira, R F A; De Maria, C A B

2015-03-15

Free proline was significantly (p<0.05) lower compared to that of other honeys from the atlantic forest, caatinga and cerrado biomes. Honeys from the atlantic forest and cerrado had a significantly (p<0.05) lower HMF than angico. Fructose and glucose in angico honeys were significantly (p<0.05) higher than those from caatinga. Mean values for turanose, nigerose, sucrose, isomaltose, maltotriose, panose and raffinose in angico were significantly (p<0.05) different from honeys from the atlantic forest and caatinga. Use of cluster analysis permitted the three kinds of honey to be grouped independently. Angico was closest to caatinga honey, but both were significantly (p<0.05) different from other atlantic forest honey. GC/SNIFFING showed that linalool oxide, 2-ethyl hexanol, phenylethanol, and phenylacetic acid may be important contributors to the flavour of angico honey. Published by Elsevier Ltd.

An evaluation of soil colonisation potential of selected fungi and their production of ligninolytic enzymes for use in soil bioremediation applications.

PubMed

McErlean, Colum; Marchant, Roger; Banat, Ibrahim M

2006-08-01

Initially sixteen fungi were screened for potential ligninolytic activity using decolourisation of a polymeric dye Poly R-478. From this, four fungi were selected, Trametes versicolor, Pleurotus ostreatus, Collybia sp., and an isolate (identified as Rhizoctonia solani) isolated from a grassland soil. Differences in the ligninolytic enzyme profiles of each of the fungi were observed. All of the four fungi tested produced MnP and laccase while the Collybia sp. and R. solani produced LiP in addition. Enzyme activity levels also varied greatly over the 21 days of testing with T. versicolor producing levels of MnP and laccase three to four times greater than the other fungi. The four fungi were then tested for their ability to colonise sand, peat (forest) and basalt and marl mixed till (field) soils through visual measurement and biomass detection in soil microcosms. Trametes versicolor and the Collybia sp. failed to grow in any of the non-sterilised soils whereas the R. solani and P. ostreatus isolates grew satisfactorily. Primers were designed to detect MnP and laccase genes in P. ostreatus and RTPCR was used to detect that these genes are expressed in forest and field soils.

A Checklist of Chigger Mites (Acari: Trombiculidae and Leeuwenhökiidae) From Taiwan, With Descriptions of Three New Species.

PubMed

Chung, Lo-Hsuan; Wu, Wen-Jer; Kuo, Chi-Chien; Wang, Hsi-Chieh

2015-11-01

Scrub typhus is a lethal human disease transmitted by larval trombiculid mites (i.e., chiggers) that have been infected with the rickettsia Orientia tsutsugamushi. In total, 21 chigger species are known from Taiwan. We update the checklist of chiggers of Taiwan based on an intensive survey of shrew and rodent hosts in grasslands and agricultural fields in lowland Taiwan, coupled with surveys of forests in one mountainous site and an opportunistic examination of submitted host specimens. Three new species of chiggers, Gahrliepia (Gateria) lieni sp. n., Gahrliepia (Gateria) minuta sp. n., and Gahrliepia (Gateria) yilanensis sp. n., as well as 23 newly recorded chigger species, were discovered. Accordingly, recorded chigger species of Taiwan more than doubled from 21 to 47 species. Two new species and nine newly recorded chigger species were discovered in forests in one mountainous site in northeastern Taiwan, suggesting that many more chigger species may be uncovered, particularly in mountainous Taiwan. Further studies should also investigate O. tsutsugamushi infection in different chigger species to assess its risks to human health. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Codonoboea personatiflora (Gesneriaceae), a new species from Peninsular Malaysia

PubMed Central

Kiew, Ruth; Sam, Yen-Yen

2012-01-01

Abstract Codonoboea personatiflora Kiew & Y.Y.Sam, sp. nov., is described from lowland forest in the foothills in Terengganu, Peninsular Malaysia. It is unique in the genus in its personate flower. Its conservation status falls within the IUCN Endangered category. PMID:23717186

Leaf-mining Nepticulidae (Lepidoptera) from record high altitudes: documenting an entire new fauna in the Andean páramo and puna.

PubMed

Stonis, Jonas R; Diškus, Arūnas; Remeikis, Andrius; Gerulaitis, Virginijus; Karsholt, Ole

2016-11-01

The monograph treats 29 species of leaf-mining pygmy moths (Insecta, Lepidoptera, Nepticulidae) discovered in the northern Andean bush and grass páramo and the central Andean puna at altitudes above 3700 m. They represent the world's highest-altitudinal Nepticulidae fauna known. The height record belongs to Stigmella nivea sp. nov. from Peru collected at an elevation of 4700 m. Except for one species, all belong to Stigmella Schrank. Twenty-two of the species recorded are new and are named and described in the current paper: Stigmella paramica Diškus & Stonis, sp. nov.; S. lachemillae Diškus & Stonis, sp. nov.; S. gynoxyphaga Diškus & Stonis, sp. nov.; S. calceolariae Diškus & Stonis, sp. nov.; S. rigida Diškus & Stonis, sp. nov.; S. altiplanica Diškus & Stonis, sp. nov.; S. robusta Remeikis & Stonis, sp. nov.; S. pseudorobusta Remeikis & Stonis, sp. nov.; S. auriargentata Remeikis & Stonis, sp. nov.; S. altimontana Remeikis & Stonis, sp. nov.; S. pandora Remeikis & Stonis, sp. nov.; S. ampla Diškus & Stonis, sp. nov.; S. evanida Diškus & Stonis, sp. nov.; S. mustelina Remeikis & Stonis, sp. nov.; S. angusta Diškus & Stonis, sp. nov.; S. alticosma Remeikis & Stonis, sp. nov.; S. nivea Remeikis & Stonis, sp. nov.; S. kristenseni Diškus & Stonis, sp. nov.; S. lobata Remeikis & Stonis, sp. nov.; S. ageratinae Diškus & Stonis, sp. nov.; S. clinopodiella Diškus & Stonis, sp. nov.; and S. calceolarifoliae Diškus & Stonis, sp. nov. Some of these species are leaf-miners on Asteraceae (Pentacalia, Baccharis, Gynoxys, and Ageratina plants), Calceolariaceae (Calceolaria), Lamiaceae (Clinopodium), and Rosaceae (Lachemilla). Twenty species are known only from adults with no data on their biology and host-plants. In addition, we present data and discuss recently discovered nepticulid taxa associated with Polylepis forests that is the natural vegetation in much of the High Andes. All High-Andean Stigmella species treated are illustrated with photographs of the adults and genitalia, distribution maps, including some with photographs of the leaf-mines and habitats.

Contrasting patterns of litterfall seasonality and seasonal changes in litter decomposability in a tropical rainforest region

NASA Astrophysics Data System (ADS)

Parsons, S. A.; Valdez-Ramirez, V.; Congdon, R. A.; Williams, S. E.

2014-06-01

The seasonality of litter inputs in forests has important implications for understanding ecosystem processes and biogeochemical cycles. We quantified the drivers of seasonality in litterfall and leaf decomposability, using plots throughout the Australian wet tropical region. Litter fell mostly in the summer (wet, warm) months in the region, but other peaks occurred throughout the year. Litterfall seasonality was modelled well with the level of deciduousness of the site (plots with more deciduous species had lower seasonality than evergreen plots), temperature (higher seasonality in the uplands), disturbance (lower seasonality with more early secondary species) and soil fertility (higher seasonality with higher N : P/P limitation) (SL total litterfall model 1 = deciduousness + soil N : P + early secondary sp: r2 = 0.63, n = 30 plots; model 2 = temperature + early secondary sp. + soil N : P: r2 = 0.54, n = 30; SL leaf = temperature + early secondary sp. + rainfall seasonality: r2 = 0.39, n = 30). Leaf litter decomposability was lower in the dry season than in the wet season, driven by higher phenolic concentrations in the dry, with the difference exacerbated particularly by lower dry season moisture. Our results are contrary to the global trend for tropical rainforests; in that seasonality of litterfall inputs were generally higher in wetter, cooler, evergreen forests, compared to generally drier, warmer, semi-deciduous sites that had more uniform monthly inputs. We consider this due to more diverse litter shedding patterns in semi-deciduous and raingreen rainforest sites, and an important consideration for ecosystem modellers. Seasonal changes in litter quality are likely to have impacts on decomposition and biogeochemical cycles in these forests due to the litter that falls in the dry being more recalcitrant to decay.

Contrasting patterns of litterfall seasonality and seasonal changes in litter decomposability in a tropical rainforest region

NASA Astrophysics Data System (ADS)

Parsons, S. A.; Valdez-Ramirez, V.; Congdon, R. A.; Williams, S. E.

2014-09-01

The seasonality of litter inputs in forests has important implications for understanding ecosystem processes and biogeochemical cycles. We quantified the drivers of seasonality in litterfall and leaf decomposability using plots throughout the Australian wet tropical region. Litter fell mostly in the summer (wet, warm) months in the region, but other peaks occurred throughout the year. Litterfall seasonality was modelled well with the level of deciduousness of the site (plots with more deciduous species had lower seasonality than evergreen plots), temperature (higher seasonality in the uplands), disturbance (lower seasonality with more early secondary species) and soil fertility (higher seasonality with higher N : P/P limitation) (SL total litterfall model 1 = deciduousness + soil N : P + early secondary sp.: r2 = 0.63, n = 30; model 2 = temperature + early secondary sp. + soil N : P: r2 = 0.54, n = 30; SL leaf = temperature + early secondary sp. + rainfall seasonality: r2 = 0.39, n = 30). Leaf litter decomposability was lower in the dry season than in the wet season, driven by higher phenolic concentrations in the dry, with the difference exacerbated particularly by lower dry season moisture. Our results are contrary to the global trend for tropical rainforests; in that seasonality of litterfall input was generally higher in wetter, cooler, evergreen forests, compared to generally drier, warmer, semi-deciduous sites that had more uniform monthly inputs. We consider this due to more diverse litter shedding patterns in semi-deciduous and raingreen rainforest sites, and an important consideration for ecosystem modellers. Seasonal changes in litter quality are likely to have impacts on decomposition and biogeochemical cycles in these forests due to the litter that falls in the dry season being more recalcitrant to decay.

Integrative revision of the giant pill-millipede genus Sphaeromimus from Madagascar, with the description of seven new species (Diplopoda, Sphaerotheriida, Arthrosphaeridae)

PubMed Central

Wesener, Thomas; Le, Daniel Minh-Tu; Loria, Stephanie F.

2014-01-01

Abstract The Malagasy giant pill-millipede genus Sphaeromimus de Saussure & Zehntner, 1902 is revised. Seven new species, S. titanus sp. n., S. vatovavy sp. n., S. lavasoa sp. n., S. andohahela sp. n., S. ivohibe sp. n., S. saintelucei sp. n., and S. andrahomana sp. n. were discovered, in one case with the help of sequence data, in the rainforests of southeastern Madagascar. The species are described using light- and scanning electron microscopy. A key to all 10 species of the genus is presented. All but one (S. andohahela) of the newly discovered species are microendemics each occurring in isolated forest fragments. The mitochondrial COI barcoding gene was amplified and sequenced for 18 Sphaeromimus specimens, and a dataset containing COI sequences of 28 specimens representing all Sphaeromimus species (except S. vatovavy) was analyzed. All species are genetically monophyletic. Interspecific uncorrected genetic distances were moderate (4–10%) to high (18–25%), whereas intraspecific variation is low (0–3.5%). Sequence data allowed the correct identification of three colour morphs of S. musicus, as well as the identity of a cave specimen, which although aberrant in its morphology and colouration, was genetically identical to the holotype of S. andrahoma. PMID:25009417

Archaeal communities in boreal forest tree rhizospheres respond to changing soil temperatures.

PubMed

Bomberg, Malin; Münster, Uwe; Pumpanen, Jukka; Ilvesniemi, Hannu; Heinonsalo, Jussi

2011-07-01

Temperature has generally great effects on both the activity and composition of microbial communities in different soils. We tested the impact of soil temperature and three different boreal forest tree species on the archaeal populations in the bulk soil, rhizosphere, and mycorrhizosphere. Scots pine, silver birch, and Norway spruce seedlings were grown in forest humus microcosms at three different temperatures, 7-11.5°C (night-day temperature), 12-16°C, and 16-22°C, of which 12-16°C represents the typical mid-summer soil temperature in Finnish forests. RNA and DNA were extracted from indigenous ectomycorrhiza, non-mycorrhizal long roots, and boreal forest humus and tested for the presence of archaea by nested PCR of the archaeal 16S rRNA gene followed by denaturing gradient gel electrophoresis (DGGE) profiling and sequencing. Methanogenic Euryarchaeota belonging to Methanolobus sp. and Methanosaeta sp. were detected on the roots and mycorrhiza. The most commonly detected archaeal 16S rRNA gene sequences belonged to group I.1c Crenarchaeota, which are typically found in boreal and alpine forest soils. Interestingly, also one sequence belonging to group I.1b Crenarchaeota was detected from Scots pine mycorrhiza although sequences of this group are usually found in agricultural and forest soils in temperate areas. Tree- and temperature-related shifts in the archaeal population structure were observed. A clear decrease in crenarchaeotal DGGE band number was seen with increasing temperature, and correspondingly, the number of euryarchaeotal DGGE bands, mostly methanogens, increased. The greatest diversity of archaeal DGGE bands was detected in Scots pine roots and mycorrhizas. No archaea were detected from humus samples from microcosms without tree seedling, indicating that the archaea found in the mycorrhizosphere and root systems were dependent on the plant host. The detection of archaeal 16S rRNA gene sequences from both RNA and DNA extractions show that the archaeal populations were living and that they may have significant contribution to the methane cycle in boreal forest soil, especially when soil temperatures rise.

Quantifying nitrogen-fixation in feather moss carpets of boreal forests.

PubMed

DeLuca, Thomas H; Zackrisson, Olle; Nilsson, Marie-Charlotte; Sellstedt, Anita

2002-10-31

Biological nitrogen (N) fixation is the primary source of N within natural ecosystems, yet the origin of boreal forest N has remained elusive. The boreal forests of Eurasia and North America lack any significant, widespread symbiotic N-fixing plants. With the exception of scattered stands of alder in early primary successional forests, N-fixation in boreal forests is considered to be extremely limited. Nitrogen-fixation in northern European boreal forests has been estimated at only 0.5 kg N ha(-1) yr(-1); however, organic N is accumulated in these ecosystems at a rate of 3 kg N ha(-1) yr(-1) (ref. 8). Our limited understanding of the origin of boreal N is unacceptable given the extent of the boreal forest region, but predictable given our imperfect knowledge of N-fixation. Herein we report on a N-fixing symbiosis between a cyanobacterium (Nostoc sp.) and the ubiquitous feather moss, Pleurozium schreberi (Bird) Mitt. that alone fixes between 1.5 and 2.0 kg N ha(-1) yr(-1) in mid- to late-successional forests of northern Scandinavia and Finland. Previous efforts have probably underestimated N-fixation potential in boreal forests.

Revision of Poa L. (Poaceae, Pooideae, Poeae, Poinae) in Mexico: new records, re-evaluation of P. ruprechtii, and two new species, P. palmeri and P. wendtii

PubMed Central

Soreng, Robert J.; Peterson, Paul M.

2012-01-01

Abstract A revision and key to the 23 species and eight subspecies of Poa (including Dissanthelium) known to occur in Mexico is provided. All voucher specimens seen are cited for accepted taxa, except Poa annua for which one voucher per state is provided. Taxa not previously known from, or poorly understood in, Mexico are discussed.Poa palmeri sp. nov. is endemic to forested slopes of the Sierra Madre Oriental, and we distinguished it from Poa ruprechtii s.s., a species of central Mexico that is here emended to include Poa sharpii (syn. nov.). Poa wendtii sp. nov. is described from the Sierra Santa Rosa in northern Coahuila. Poa tacanae is placed in synonymy in Poa seleri. Poa gymnantha and Poa occidentalis are newly reported for Mexico, and material historically identified as Poa villaroelii areplaced in Poa chamaeclinos.The genus Dissanthelium is considered to belong within Poa, and the Mexican taxa, Dissanthelium calycina subsp. mathewsii and Dissanthelium californicum, are treated as Poa calycina var. mathewsii and Poa thomasii, respectively. Poa subsect. Papillopoa subsect. nov. is erected for Poa mulleri. Lectotypes are designated for Poa conglomerata and Poa seleri. PMID:23185125

Contributions to the herpetofauna of the Albertine Rift: Two new species of chameleon (Sauria: Chamaeleonidae) from an isolated montane forest, south eastern Democratic Republic of Congo.

PubMed

Tilbury, Colin R; Tolley, Krystal A

2015-01-13

Two new species of chameleons from the genera Rhampholeon and Kinyongia are described from an isolated montane forest remnant situated toward the southern end of the Albertine Rift bordering Lake Tanganyika. The closest known localities of species from these genera are 200km and 400km to the north respectively, separated by large intervening tracts of lowland savannah and Brachystegia (Miombo) woodland - habitats not normally inhabited by species of these genera. Rhampholeon hattinghi sp. nov. and Kinyongia mulyai sp. nov. bear superficial resemblances to previously described species (Rh. boulengeri Steindachner and K. adolfifriderici  (Sternfeld)). Rhampholeon hattinghi sp. nov. has a relatively smooth supra-orbital ridge, deep axillary but absent inguinal mite pockets, prominent white spots on the base of the tail and a uniquely derived hemipenal morphology with billowing parasulcal evaginations. Like K. adolfifriderici, Kinyongia mulyai sp. nov. is devoid of a rostral appendage but differs in having a longer and narrower head, a higher upper labial scale count and by the absence of a dorsal crest in the male. To place these new chameleons within the context of their respective genera, Bayesian and maximum likelihood phylogenetic analyses were carried out utilising two mitochondrial (ND2 and 16S) and one nuclear marker (RAG1).  Both chameleons were found to have morphological features that distinguish them from other congeners. Based on phylogenetic analysis they are clearly separate evolutionary lineages and are described as new species. 

Morphology and phylogenetic analysis of two oxytrichid soil ciliates from China, Oxytricha paragranulifera n. sp. and Oxytricha granulifera Foissner and Adam, 1983 (Protista, Ciliophora, Hypotrichia).

PubMed

Shao, Chen; Lv, Zhao; Pan, Ying; Al-Rasheid, Khaled A S; Yi, Zhenzhen

2014-09-01

The morphology and infraciliature of two hypotrichous ciliates, Oxytricha paragranulifera n. sp. and Oxytricha granulifera Foissner and Adam, 1983, collected respectively from the surface of a sandy soil in the Huguang mangrove forest, Zhanjiang, China, and the surface of soil in a forest beside Ziwu Road, Xian, north-west China, were examined. O. paragranulifera n. sp. is characterized by an elongate body with slightly tapered anterior end, two macronuclear nodules and two micronuclei, paroral and endoral in Stylonychia-pattern, colourless cortical granules distributed in clusters or irregular short rows, adoral zone occupying 37 % of the body length, marginal rows almost confluent posteriorly, six dorsal kineties and three caudal cirri, caudal cirri and dorsal bristles almost indistinguishable when viewed in vivo. The well-known O. granulifera Foissner and Adam, 1983 was also redescribed and can be separated from the novel species by having cortical granules arranged along dorsal kineties and marginal rows on both sides (vs grouped in clusters as well as in short irregular rows), paroral and endoral in Oxytricha-pattern (vs in Stylonychia-pattern), macronuclear nodules obviously detached (vs adjacent) and a non-saline terrestrial habitat (vs saline terrestrial). The separation of these two taxa is also firmly supported by the molecular data, which show a significant difference between the two in their SSU rRNA gene sequences (similarity 97.1 %). Phylogenetic analyses based on SSU rRNA gene sequence data suggest a close relationship within the Oxytrichidae assemblage between O. paragranulifera n. sp. and O. granulifera. © 2014 IUMS.

Bark and Ambrosia Beetle (Curculionidae: Scolytinae) Diversity Found in Agricultural and Fragmented Forests in Piracicaba-SP, Brazil.

PubMed

Sandoval Rodríguez, Carla; Cognato, Anthony I; Righi, Ciro Abbud

2017-12-08

Land use changes and forest fragmentation result in biodiversity loss and displacement, with insects among the most affected groups. Among these, bark beetles (Curculionidae: Scolytinae) occupy a prominent position due to their close ties to food resources, i.e., trees, and importance as primary decomposers in forest ecosystems. Therefore, our study aimed to document scolytine biodiversity associated with landscape components that vary based on their physical or botanical composition. Bark beetle diversity was sampled monthly for 12 mo in an Atlantic forest remnant and five adjacent vegetation plots (mixed Agroforestry System-AFS, of native trees and fruit species; AFS of rubber trees and coffee plants; coffee monoculture; rubber monoculture; and pasture). In total, 1,833 individuals were sampled from 38 species of which 24 (63%) were detected in very low abundance. The remaining 14 species were more abundant and widespread almost in all areas. Hypothenemus hampei (Westwood), Premnobius cavipennis (Eichhoff), Hypothenemus sp1., and Xyleborus volvulus (Fabricius) were the most abundant. The greatest abundance and richness of bark beetles were found in the dry and cold season. The varied microclimatic conditions of the vegetation plots greatly affected the diversity of the Scolytinae. Solar radiation presented a significant negative effect on abundance in almost all the studied areas. The greatest scolytine diversity was found in anthropic areas with tree canopy structure. Open areas (pasture and coffee monocrop) had a lower species diversity. Similarly, a lower abundance and species richness were found for the Atlantic forest remnant. © The Authors 2017. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Taxonomic revision of the tarantula genus Aphonopelma Pocock, 1901 (Araneae, Mygalomorphae, Theraphosidae) within the United States

PubMed Central

Hamilton, Chris A.; Hendrixson, Brent E.; Bond, Jason E.

2016-01-01

Abstract This systematic study documents the taxonomy, diversity, and distribution of the tarantula spider genus Aphonopelma Pocock, 1901 within the United States. By employing phylogenomic, morphological, and geospatial data, we evaluated all 55 nominal species in the United States to examine the evolutionary history of Aphonopelma and the group’s taxonomy by implementing an integrative approach to species delimitation. Based on our analyses, we now recognize only 29 distinct species in the United States. We propose 33 new synonymies (Aphonopelma apacheum, Aphonopelma minchi, Aphonopelma rothi, Aphonopelma schmidti, Aphonopelma stahnkei = Aphonopelma chalcodes; Aphonopelma arnoldi = Aphonopelma armada; Aphonopelma behlei, Aphonopelma vogelae = Aphonopelma marxi; Aphonopelma breenei = Aphonopelma anax; Aphonopelma chambersi, Aphonopelma clarum, Aphonopelma cryptethum, Aphonopelma sandersoni, Aphonopelma sullivani = Aphonopelma eutylenum; Aphonopelma clarki, Aphonopelma coloradanum, Aphonopelma echinum, Aphonopelma gurleyi, Aphonopelma harlingenum, Aphonopelma odelli, Aphonopelma waconum, Aphonopelma wichitanum = Aphonopelma hentzi; Aphonopelma heterops = Aphonopelma moderatum; Aphonopelma jungi, Aphonopelma punzoi = Aphonopelma vorhiesi; Aphonopelma brunnius, Aphonopelma chamberlini, Aphonopelma iviei, Aphonopelma lithodomum, Aphonopelma smithi, Aphonopelma zionis = Aphonopelma iodius; Aphonopelma phanum, Aphonopelma reversum = Aphonopelma steindachneri), 14 new species (Aphonopelma atomicum sp. n., Aphonopelma catalina sp. n., Aphonopelma chiricahua sp. n., Aphonopelma icenoglei sp. n., Aphonopelma johnnycashi sp. n., Aphonopelma madera sp. n., Aphonopelma mareki sp. n., Aphonopelma moellendorfi sp. n., Aphonopelma parvum sp. n., Aphonopelma peloncillo sp. n., Aphonopelma prenticei sp. n., Aphonopelma saguaro sp. n., Aphonopelma superstitionense sp. n., and Aphonopelma xwalxwal sp. n.), and seven nomina dubia (Aphonopelma baergi, Aphonopelma cratium, Aphonopelma hollyi, Aphonopelma mordax, Aphonopelma radinum, Aphonopelma rusticum, Aphonopelma texense). Our proposed species tree based on Anchored Enrichment data delimits five major lineages: a monotypic group confined to California, a western group, an eastern group, a group primarily distributed in high-elevation areas, and a group that comprises several miniaturized species. Multiple species are distributed throughout two biodiversity hotspots in the United States (i.e., California Floristic Province and Madrean Pine-Oak Woodlands). Keys are provided for identification of both males and females. By conducting the most comprehensive sampling of a single theraphosid genus to date, this research significantly broadens the scope of prior molecular and morphological investigations, finally bringing a modern understanding of species delimitation in this dynamic and charismatic group of spiders. PMID:27006611

Candida queiroziae sp. nov., a cellobiose-fermenting yeast species isolated from rotting wood in Atlantic Rain Forest.

PubMed

Santos, Renata O; Cadete, Raquel M; Badotti, Fernanda; Mouro, Adriane; Wallheim, Daniela O; Gomes, Fátima C O; Stambuk, Boris U; Lachance, Marc-André; Rosa, Carlos A

2011-03-01

Eight strains of a novel yeast species were isolated from rotting wood and wood-boring insects in Atlantic Rain Forest ecosystems in Brazil. Sequences of the D1/D2 domains of the large subunit of the rRNA gene showed that the yeast belongs to the Scheffersomyces clade and that it is related to Candida lignicola and Candida coipomoensis. The new species was isolated from rotting wood of three different localities and a wood-boring insect suggesting that these substrates are its ecological niche. This new yeast species is able to assimilate cellobiose and other compounds related to rotting wood. Strong fermentation of cellobiose in Durham tubes was observed for the strains of this new yeast. The new species produced an intracellular β-glucosidase responsible for cellobiose hydrolysis. The novel species, Candida queiroziae sp. nov., is proposed to accommodate these isolates. The type strain of C. queiroziae is UFMG-CLM 5.1(T) (=CBS 11853(T) = NRRL Y-48722(T)).

Vegetation history and salinity gradient during the last 3700 years in Pichavaram estuary, India

NASA Astrophysics Data System (ADS)

Srivastava, Jyoti; Farooqui, Anjum; Hussain, S. M.

2012-10-01

Palaeoclimate, palaeoecological and palaeoshoreline studies were carried out for a 2.5 m deep sediment core deposited since ˜3700 yrs BP in the central part of Pichavaram mangrove wetland, Cauvery river delta. Presently, the study area is dominated by Avicennia officinalis, A. marina and Suaeda sp. with fringes of Rhizophora sp. along the backwater channel. Based on sedimentology, palynological and thecamoebian analysis, it is inferred that since 2100 yrs BP the climate amelioration took place from warm and humid with strengthened monsoon to a dry and arid climate coupled with weakened monsoon condition inducing changes in ecology vulnerable for mangroves. Consequently, the vegetation too evolved from moist deciduous/evergreen forest to mixed deciduous forest and a reduction in mangrove diversity. The qualitative and quantitative study show a decline in the mangroves since the last millennium which may be attributed to the increased salinity along with enhanced anthropogenic activities in Pichavaram estuary. This is reflected by the dominance of salt tolerant mangrove associates since the last millennium.

Diversity and persistence of ectomycorrhizal fungi and their effect on nursery-inoculated Pinus pinaster in a post-fire plantation in Northern Portugal.

PubMed

Franco, Albina R; Sousa, Nadine R; Ramos, Miguel A; Oliveira, Rui S; Castro, Paula M L

2014-11-01

Ectomycorrhizal fungi (ECMF) play an important role in forest ecosystems, often mitigating stress factors and increasing seedling performance. The aim of this study was to investigate the effects of a nursery inoculation on Pinus pinaster growth and on the fungal communities established when reforesting burned areas. Inoculated P. pinaster saplings showed 1.5-fold higher stem height than the non-inoculated controls after a 5 year growth period, suggesting that fungal inoculation could potentiate tree growth in the field. Ordination analysis revealed the presence of different ECMF communities on both plots. Among the nursery-inoculated fungi, Laccaria sp., Rhizopogon sp., Suillus bovinus and Pisolithus sp. were detected on inoculated Pinus saplings on both sampling periods, indicating that they persisted after field establishment. Other fungi were also detected in the inoculated plants. Phialocephala sp. was found on the first assessment, while Terfezia sp. was detected on both sampling periods. Laccaria sp. and Rhizopogon sp. were identified in the control saplings, belonging however to different species than those found in the inoculated plot. Inocybe sp., Thelephora sp. and Paxillus involutus were present on both sampling periods in the non-inoculated plots. The results suggest that ECMF inoculation at nursery stage can benefit plant growth after transplantation to a post-fire site and that the inoculated fungi can persist in the field. This approach has great potential as a biotechnological tool to aid in the reforestation of burned areas.

Revision of Diplosynapsis Enderlein, 1914 (Diptera, Asilidae, Asilinae) with description of four new species.

PubMed

Vieira, Rodrigo; Rafael, José Albertino

2016-12-15

The robber fly genus Diplosynapsis Enderlein, 1914 is reviewed and four new species are described-D. chela sp. nov. (Amazonas state, Brazil), D. fisheri sp. nov. (Guapiles, Heredia, Limon, Puntarenas province, Costa Rica), D. spina sp. nov. (Rio de Janeiro state, Brazil) and D. uncinata sp. nov. (Amazonas state, Brazil). A lectotype is designated for D. cellata (Schiner, 1868) pres. desig. and comments are made on D. remus Tomasovic, 2002. An identification key and illustrations are presented for all species.

Bryophryne phuyuhampatu sp. n., a new species of Cusco Andes frog from the cloud forest of the eastern slopes of the Peruvian Andes (Amphibia, Anura, Craugastoridae).

PubMed

Catenazzi, Alessandro; Ttito, Alex; Diaz, M Isabel; Shepack, Alexander

2017-01-01

A new species of Bryophryne from the humid montane forest of the Department of Cusco, Peru, is described. Specimens were collected at 2795-2850 m a.s.l. in the Área de Conservación Privada Ukumari Llaqta, Quispillomayo valley, in the province of Paucartambo. The new species is readily distinguished from all other species of Bryophryne by having green coloration on dorsum, and blue flecks on flanks and ventral parts. Specimens are characterized by lacking a distinct tympanic annulus, tympanic membrane, and dentigerous processes of vomers, and by having dorsal skin shagreen, discontinuous dorsolateral folds, skin tuberculate on flanks, skin areolate on ventral surfaces of the body, and fingers and toes without lateral fringes or webbing. The new species has a snout-vent length of 14.2-16.9 mm in three males and 22.2-22.6 mm in two females, and is smaller than all other congeneric species except for B. abramalagae . Generic allocation is supported by low genetic distances of the 16S mitochondrial gene and morphological similarity with other species of Bryophryne , and geographic distribution. Bryophryne phuyuhampatu sp. n. is only known from the type locality, a cloud forest along the Quispillomayo River in the upper Nusiniscato watershed.

Molecular and microscopic analysis of the gut contents of abundant rove beetle species (Coleoptera, Staphylinidae) in the boreal balsam fir forest of Quebec, Canada

PubMed Central

Klimaszewski, Jan; Morency, Marie-Josee; Labrie, Philippe; Séguin, Armand; Langor, David; Work, Timothy; Bourdon, Caroline; Thiffault, Evelyne; Paré, David; Newton, Alfred F.; Thayer, Margaret K.

2013-01-01

Abstract Experimental research on beetle responses to removal of logging residues following clearcut harvesting in the boreal balsam fir forest of Quebec revealed several abundant rove beetle (Staphylinidae) species potentially important for long-term monitoring. To understand the trophic affiliations of these species in forest ecosystems, it was necessary to analyze their gut contents. We used microscopic and molecular (DNA) methods to identify the gut contents of the following rove beetles: Atheta capsularis Klimaszewski, Atheta klagesi Bernhauer, Oxypoda grandipennis (Casey), Bryophacis smetanai Campbell, Ischnosoma longicorne (Mäklin), Mycetoporus montanus Luze, Tachinus frigidus Erichson, Tachinus fumipennis (Say), Tachinus quebecensis Robert, and Pseudopsis subulata Herman. We found no apparent arthropod fragments within the guts; however, a number of fungi were identified by DNA sequences, including filamentous fungi and budding yeasts [Ascomycota: Candida derodonti Suh & Blackwell (accession number FJ623605), Candida mesenterica (Geiger) Diddens & Lodder (accession number FM178362), Candida railenensis Ramirez and Gonzáles (accession number JX455763), Candida sophie-reginae Ramirez & González (accession number HQ652073), Candida sp. (accession number AY498864), Pichia delftensis Beech (accession number AY923246), Pichia membranifaciens Hansen (accession number JQ26345), Pichia misumaiensis Y. Sasaki and Tak. Yoshida ex Kurtzman 2000 (accession number U73581), Pichia sp. (accession number AM261630), Cladosporium sp. (accession number KF367501), Acremoniumpsammosporum W. Gams (accession number GU566287), Alternaria sp. (accession number GU584946), Aspergillus versicolor Bubak (accession number AJ937750), and Aspergillusamstelodami (L. Mangin) Thom and Church (accession number HQ728257)]. In addition, two species of bacteria [Bradyrhizobium japonicum (Kirchner) Jordan (accession number BA000040) and Serratia marcescens Bizio accession number CP003942] were found in the guts. These results not only provide evidence of the consumer-resource relations of these beetles but also clarify the relationship between rove beetles, woody debris and fungi. Predominance of yeast-feeding by abundant rove beetles suggests that it may play an important role in their dietary requirements. PMID:24294095

Molecular and microscopic analysis of the gut contents of abundant rove beetle species (Coleoptera, Staphylinidae) in the boreal balsam fir forest of Quebec, Canada.

PubMed

Klimaszewski, Jan; Morency, Marie-Josee; Labrie, Philippe; Séguin, Armand; Langor, David; Work, Timothy; Bourdon, Caroline; Thiffault, Evelyne; Paré, David; Newton, Alfred F; Thayer, Margaret K

2013-01-01

Experimental research on beetle responses to removal of logging residues following clearcut harvesting in the boreal balsam fir forest of Quebec revealed several abundant rove beetle (Staphylinidae) species potentially important for long-term monitoring. To understand the trophic affiliations of these species in forest ecosystems, it was necessary to analyze their gut contents. We used microscopic and molecular (DNA) methods to identify the gut contents of the following rove beetles: Atheta capsularis Klimaszewski, Atheta klagesi Bernhauer, Oxypoda grandipennis (Casey), Bryophacis smetanai Campbell, Ischnosoma longicorne (Mäklin), Mycetoporus montanus Luze, Tachinus frigidus Erichson, Tachinus fumipennis (Say), Tachinus quebecensis Robert, and Pseudopsis subulata Herman. We found no apparent arthropod fragments within the guts; however, a number of fungi were identified by DNA sequences, including filamentous fungi and budding yeasts [Ascomycota: Candida derodonti Suh & Blackwell (accession number FJ623605), Candida mesenterica (Geiger) Diddens & Lodder (accession number FM178362), Candida railenensis Ramirez and Gonzáles (accession number JX455763), Candida sophie-reginae Ramirez & González (accession number HQ652073), Candida sp. (accession number AY498864), Pichia delftensis Beech (accession number AY923246), Pichia membranifaciens Hansen (accession number JQ26345), Pichia misumaiensis Y. Sasaki and Tak. Yoshida ex Kurtzman 2000 (accession number U73581), Pichia sp. (accession number AM261630), Cladosporium sp. (accession number KF367501), Acremoniumpsammosporum W. Gams (accession number GU566287), Alternaria sp. (accession number GU584946), Aspergillus versicolor Bubak (accession number AJ937750), and Aspergillusamstelodami (L. Mangin) Thom and Church (accession number HQ728257)]. In addition, two species of bacteria [Bradyrhizobium japonicum (Kirchner) Jordan (accession number BA000040) and Serratia marcescens Bizio accession number CP003942] were found in the guts. These results not only provide evidence of the consumer-resource relations of these beetles but also clarify the relationship between rove beetles, woody debris and fungi. Predominance of yeast-feeding by abundant rove beetles suggests that it may play an important role in their dietary requirements.

Natural fertility and heavy metals in the soil in border areas of Atlantic Forest located in an urban area

NASA Astrophysics Data System (ADS)

Longo, R. M.; Ribeiro, A. I.

2017-12-01

Regina Márcia Longo2, Deborah Regina Mendes2, Admilson Irio Ribeiro31 Part of the project funded by the Foundation of the State of São Paulo Research - Brazil (FAPESP - process 2012 / 14423-8)2 Pontifícal Catholic University of Campinas - Brazil; email: regina.longo@puc-campinas.edu.br 3 Paulista State University (UNESP-Sorocaba - Brazil)Due to the disorderly growth of cities, especially in tropical areas, it is observed that the destruction or fragmentation of natural ecosystems has presented itself as one of the great problems of the present time. The forest fragments, although important for the maintenance of microclimate, genetic variety and species diversity, are increasingly impacted due to the activities that are developed in their environment. The present work had as main objective to quantify the level of natural fertility and the presence of heavy metals in the soil in border areas of a forest remnant located in an urban area in the city of Campinas / SP - Brazil in order to verify possible interferences of the anthropic actions carried out in adjacent areas. Soil composite samples were collected at 40 points equidistant at 200 m along the edge. In the samples were determined the contents of: pH (CaCl2); organic matter (OM); phosphorus (P), potassium (K), calcium (Ca) and magnesium (Mg), Cation Exchange Capacity (CEC), base sum (SB) and percentage saturation of bases in addition to heavy metals lead (Pb), chromium (Cr) and nickel (Ni). The results indicated that the nutritional quality of the soil was adequate for the tropical regions. In relation to micronutrients, high levels of copper, zinc and manganese were observed. Regarding the metals, it was observed that iron was the one that accused the most irregularities along the edge, while the lead had higher indices for all the edges evaluated. In general, the presented results indicated that the forest remnant presents its border areas under external pressures, presenting several factors of degradation as real estate occupation, presence of access roads and traffic of vehicles and people, of the production of sugar cane, fire and deposition of solid waste, or other degradation factor that directly interfere in the areas of the edges of this important remnant of Atlantic Forest. Key words: forest remnants, tropical soils, edge effect

New species of the damselfly genus Argia from Mexico, Central America and Ecuador with an emphasis on Costa Rica (Insecta: Odonata: Coenagrionidae).

PubMed

Garrison, Rosser W; Ellenrieder, Natalia VON

2017-02-20

Seven new species of Argia are described, five of which occur in Costa Rica: Argia calverti n. sp. (Holotype ♂, Costa Rica, Cartago Prov., Tapantí Reserve, 1,310 m, 6 vii 1963, F. G. Thompson leg., in FSCA); Argia carolus n. sp. (Holotype ♂, Costa Rica, San José Prov., El Rodeo Biological Reserve, 7 km W of Villa Colón, 9°54' N, 84°16' W, 561 m, 10-13 vii 1990, T. W. Donnelly leg., in FSCA); Argia elongata n. sp. (Holotype ♂, Costa Rica, Cartago Prov., Reventazón river, SE of Turrialba by highway 10, 9°52'56'' N, 83°38'49'' W, 561 m, 10 viii 1979, R. W. & J. A. Garrison leg., in CSCA); Argia haberi n. sp. (Holotype ♂, Costa Rica, San José Prov., Bosque del Tolomuco, km 118 on Pan American highway, in seeps and trickles through brushy pasture on forested hillside, 9°28'18'' N, 83°41'48'' W, 1,710 m, 27 iii 2006, F. Sibley leg., in FSCA); Argia schorri n. sp. (Holotype ♂, Costa Rica, Puntarenas Prov., 2.8 mi E of Golfito, 8°39' N, 83°7' W, 35 m, 4 vii 1967, O. S. Flint, Jr. & M. A. Ortiz B. leg., in USNM), and two which are so far only known from Mexico and Ecuador respectively: Argia rudolphi n. sp. (Holotype ♂, Mexico, Puebla State, Zihuateutla, Sierra de Huauchinango, La Unión, in drainage area, 20°14'25'' N, 97°53'38'' W, 596 m, 21 v 1987, R. Novelo & A. Gómez leg., in CSCA) and Argia schneideri n. sp. (Holotype ♂, Ecuador, Napo Prov., Las Palmas, on Anzu river in Napo river watershed, 11 xii 1936, W. Clark-MacIntyre leg., in UMMZ). All the new species, as well as closely related species needed for diagnosis including A. anceps Garrison, A. cupraurea Calvert, A. cuprea (Hagen), A. extranea (Hagen), A. fissa Selys, A. fulgida Navás, A. oenea Hagen in Selys, A. popoluca Calvert, A. rhoadsi Calvert, and A. westfalli Garrison, are illustrated and diagnosed from their congeners and their known distribution areas are mapped.

An endemic new species of Ameiva (Squamata: Teiidae) from an isolated dry   forest in southern Peru.

PubMed

Landauro, Caroll Z; García-Bravo, Antonio; Venegas, Pablo J

2015-04-10

We describe a new species of Ameiva from an interandean dry forest in central-southern Peru. Ameiva reticulata sp. nov. represents the fifth species in the genus known to occur in Peru. The new species is similar to the species of the A. ameiva complex such as A. ameiva, A. atrigularis, A. pantherina, and A. praesignis, and is distinguished from these by a smaller size, a lower count of dorsal scales along the middorsal line and scales across the midbody, and by the gular coloration.

TOPOGRAPHIC VIEW THE STATE FORESTER'S COMPLEX, VIEW LOOKING SOUTH FROM ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

TOPOGRAPHIC VIEW THE STATE FORESTER'S COMPLEX, VIEW LOOKING SOUTH FROM STATE STREET, WITH THE NATIONAL REGISTER-LISTED OREGON STATE FORESTER'S OFFICE BUILDING TO THE LEFT OF VIEW. - Oregon State Forester's Office Complex, 2600 State Street, Salem, Marion, OR

36 CFR 230.4 - State program administration.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 36 Parks, Forests, and Public Property 2 2011-07-01 2011-07-01 false State program administration. 230.4 Section 230.4 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE... the State Forester, shall establish a State Forest Stewardship Coordinating Committee whose...

Novel alpha-glucosidase inhibitors, CKD-711 and CKD-711a produced by Streptomyces sp. CK-4416. I. Taxonomy, fermentation and isolation.

PubMed

Kim, Jong-Gwan; Chang, Hung-Bae; Kwon, Young-In; Moon, Seung-Kee; Chun, Hyoung-Sik; Ahn, Soon Kil; Hong, Chung Il

2002-05-01

New alpha-glucosidase inhibitors, CKD-711 and CKD-711a were produced from the fermentation broth of Streptomyces sp. CK-4416 which was isolated from a forest soil of Jeju Island, South Korea. CKD-711 and CKD-711a were purified by Dowex 50W-2X and Sephadex G-10 column chromatography. In in vitro studies, CKD-711 showed a potent inhibitory activity against a-glucosidase from mammalian, but less inhibition against a-amylase from microorganism and mammalian. CKD-711a showed a lower inhibitory activity than CKD-711.

[Characterization of High Andean forest edges and implications for their ecological restoration (Colombia)].

PubMed

Montenegro, Alba Lucía; Vargas Ríos, Orlando

2008-09-01

The growth of a forest patch through colonization of the adjacent matrix is mostly determined by the particular characteristics of the edge zone. Knowing how these characteristics are related to a specific edge type and how they influence the regeneration process, is important for High Andean forest edges restoration. This study aimed to characterize three types of High Andean forest edge in Cogua Forest Reserve (Colombia): 1) edge of Chusquea scandens, 2) "paramizado", and 3) old edge, characterized for being in a later successional state. Two forest patches were chosen for each edge type and 13 criteria were analyzed; these were of topographic order, micro-environmental order, vegetation structure and species composition. In each patch the vegetation was evaluated by means of two 60 m transects perpendicular to the edge and along the matrix-edge-interior of the forest gradient. All woody plant species were identified and counted to determine their abundance. Environmental variables (air temperature, relative humidity, wind speed, and light radiation) were measured in one of the transects. Three of the 13 criteria were of little importance in shaping the type of edge habitat (slope, patch shape and area). The others were closely related with the micro-environmental conditions and in turn with the vegetation structure and composition; this relationship confers particular characteristics to each edge type. The microclimate and floristic edge limits coincided; edges extend between 10 and 20 m into the forest depending on the edge type. The paramizado edge has the smallest environmental self-regulation capacity and is more exposed to fluctuations of the studied variables, because of its greatest exposition to the wind action and loss of the tallest trees (between 10 and 15 m) which regulate the understorey microclimate. This low environmental buffer capacity prevents the establishing of mature forest species (for example, Schefflera sp. and Oreopanax bogotensis) although they are found in other areas within the same patch. All these results show that the paramizado edge needs the most intervention for its restoration. The Chusquea scandens edge forest is the most sheltered since this species acts as a protecting shield. However it still needs to be controlled to allow the adjacent matrix colonization by the forest species and natural regeneration, as it does in the old edge type forest, which moreover has an intermediate self-regulating capacity relative to the other two. The vegetation composition reveals that most of the edge species can also grow inside, beyond the forest edge.

The Influence of Anthropogenic Sources on Fluxes of Secondary Organic Aerosol Precursors From a Deciduous Forest in the Southeastern United States

NASA Astrophysics Data System (ADS)

Saylor, R. D.; Stein, A. F.

2012-12-01

The dynamic, bi-directional exchange of trace chemical species between forests and the atmosphere has important impacts on both the forest ecosystem and atmospheric composition, with potentially profound consequences on air quality, climate and global ecosystem functioning. Forests are a dominant source of biogenic volatile organic compound (BVOC) emissions into the earth's atmosphere and thus play an important role in the formation of secondary organic aerosol (SOA). To arrive at a better scientific understanding of the complex chemical and physical processes of forest-atmosphere exchange and provide a platform for robust analysis of field measurements of these processes, a process-level, multiphase model of the atmospheric chemistry and physics of forest canopies is being developed. This model, the Atmospheric Chemistry and Canopy Exchange Simulation System (ACCESS) is being used to investigate various aspects of forest-atmosphere exchange and chemistry including gas, aqueous and aerosol phases. ACCESS currently includes processes accounting for the emission of BVOCs from the canopy, turbulent vertical transport within and above the canopy and throughout the height of the planetary boundary layer, detailed chemical reactions, mixing with the background atmosphere and bi-directional exchange between the atmosphere and the canopy and the forest floor. The Walker Branch Watershed (WBW) is a dedicated ecosystem research area on the U. S. Department of Energy's Oak Ridge Reservation in eastern Tennessee. The 97.5 ha watershed has been the site of long-term ecosystem and atmospheric research activities since the mid-1960's. A flux tower located within the watershed (35°57'30"N, 84°17'15"W; 365 m above mean sea level) and 10 km southwest of Oak Ridge, Tennessee, has served as a focal point for previous atmospheric turbulence and chemical flux measurements and the canopy morphology of the forest surrounding the flux tower has been extensively documented. The forest is broadleaf deciduous consisting of chestnut oak (Quercus prinus), tulip poplar (Liriodendron tulipifera), white oak (Quercus alba), red oak (Quercus rubra), red maple (Acer rubrum), and various hickory species (Carya sp.) in order of decreasing biomass density. At the time of isoprene flux measurements made at the tower in 1999, the stand was approximately 50 years old, the overstory canopy height was 24 m, and the whole canopy leaf area index was 4.9 m2 leaf/m2 ground area. In this presentation, the model formulation is described and results from the application of ACCESS to the WBW forest are presented and compared to measurements made at the site to investigate the influence of background anthropogenic sources on above canopy fluxes of SOA precursors in an isoprene emission dominated landscape in the unique atmospheric chemical environment of the southeastern United States. In particular, levels of background NOx concentrations are found to significantly influence both the magnitude and chemical composition of fluxes of SOA precursors from the canopy.

Evaluation of serum insulin-like growth factor-1 and 26S proteasome concentrations in healthy dogs and dogs with chronic diseases depending on body condition score.

PubMed

Gerke, Ingrid; Kaup, Franz-Josef; Neumann, Stephan

2018-06-01

In patients suffering from chronic diseases, the objective assessment of metabolic states could be of interest for disease prognosis and therapeutic options. Therefore, the aim of this study was to assess insulin-like growth factor-1 (IGF-1) and 26S proteasome (26SP) in healthy dogs and dogs suffering from chronic diseases depending on their body condition score (BCS) and to examine their potential for objective assessment of anabolic and catabolic states. Serum concentrations of IGF-1, an anabolic hormone, and 26SP, a multiprotein complex which is part of the ubiquitin-proteasome pathway, by which the majority of endogenous proteins including the muscle proteins are degraded, were measured in 21 healthy dogs and 20 dogs with chronic diseases by canine ELISA. The concentrations of IGF-1, 26SP and their ratio (IGF-1/26SP) were set in relationship to the BCS of the dogs. When examining healthy and chronically diseased dogs separately, a positive correlation between IGF-1 and the BCS was observed in the healthy group and a negative correlation between 26SP and the BCS was noted in dogs with chronic diseases. Further, dogs suffering from chronic diseases showed higher 26SP concentrations and lower values for IGF-1/26SP than the healthy dogs. Overall, we detected a negative correlation between 26SP and the BCS and a positive correlation between IGF-1/26SP and the BCS. The results of our study indicate usability of IGF-1 for description of anabolic states, while 26SP could be useful for detection and description of catabolic states. Finally, the ratio IGF-1/26SP seems to be promising for assessment of metabolic states. Copyright © 2018 Elsevier Ltd. All rights reserved.

The termites of Early Eocene Cambay amber, with the earliest record of the Termitidae (Isoptera)

PubMed Central

Engel, Michael S.; Grimaldi, David A.; Nascimbene, Paul C.; Singh, Hukam

2011-01-01

Abstract The fauna of termites (Isoptera) preserved in Early Eocene amber from the Cambay Basin (Gujarat, India) are described and figured. Three new genera and four new species are recognized, all of them Neoisoptera – Parastylotermes krishnai Engel & Grimaldi, sp. n. (Stylotermitidae); Prostylotermes kamboja Engel & Grimaldi, gen. et sp. n. (Stylotermitidae?); Zophotermes Engel, gen. n., with Zophotermes ashoki Engel & Singh, sp. n. (Rhinotermitidae: Prorhinotermitinae); and Nanotermes isaacae Engel & Grimaldi, gen. et sp. n. (Termitidae: Termitinae?). Together these species represent the earliest Tertiary records of the Neoisoptera and the oldest definitive record of Termitidae, a family that comprises >75% of the living species of Isoptera. Interestingly, the affinities of the Cambay amber termites are with largely Laurasian lineages, in this regard paralleling relationships seen between the fauna of bees and some flies. Diversity of Neoisoptera in Indian amber may reflect origin of the amber deposit in Dipterocarpaceae forests formed at or near the paleoequator. PMID:22287892

A multi-proxy assessment of dieback causes in a Mediterranean oak species.

PubMed

Colangelo, Michele; Camarero, J Julio; Battipaglia, Giovanna; Borghetti, Marco; De Micco, Veronica; Gentilesca, Tiziana; Ripullone, Francesco

2017-05-01

Drought stress causes forest dieback that is often explained by two interrelated mechanisms, namely hydraulic failure and carbon starvation. However, it is still unclear which functional and structural alterations, related to these mechanisms, predispose to dieback. Here we apply a multi-proxy approach for the characterization of tree structure (radial growth, wood anatomy) and functioning (δ13C, δ18O and non-structural carbohydrates (NSCs)) in tree rings before and after drought-induced dieback. We aim to discriminate which is the main mechanism and to assess which variables can act as early-warning proxies of drought-triggered damage. The study was tailored in southern Italy in two forests (i.e., San Paolo (SP) and Oriolo (OR)) where declining and non-declining trees of a ring-porous tree species (Quercus frainetto Ten.) showing anisohydric behavior coexist. Both stands showed growth decline in response to warm and dry spring conditions, although the onset of dieback was shifted between them (2002 in SP and 2009 in OR). Declining trees displayed a sharp growth drop after this onset with reductions of 49% and 44% at SP and OR sites, respectively. Further, contrary to what we expected, declining trees showed a lower intrinsic water-use efficiency compared with non-declining trees after the dieback onset (with reductions of 9.7% and 5.6% at sites SP and OR, respectively), due to enhanced water loss through transpiration, as indicated by the lower δ18O values. This was more noticeable at the most drought-affected SP stand. Sapwood NSCs did not differ between declining and non-declining trees, indicating no carbon starvation in affected trees. Thus, the characterized structural and functional alterations partially support the hydraulic failure mechanism of dieback. Finally, we show that growth data are reliable early-warning proxies of drought-triggered dieback. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Photo-controllable memristive behavior of graphene/diamond heterojunctions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ueda, K.; Aichi, S.; Asano, H.

2016-05-30

Graphene/diamond (carbon sp{sup 2}-sp{sup 3}) heterojunctions are demonstrated as photo-controllable memristors with photoswitchable multiple resistance states and nonvolatile memory functions. The ratio of conductivity change between the higher and lower resistance states of the junctions was ∼10{sup 3}. The junctions exhibit light wavelength selectivity, and the resistance states can be switched only by blue or violet light irradiation. The mechanism for the change in photoconductivity is considered to be caused by oxidation-reduction of the graphene and/or graphene-diamond (sp{sup 2}-sp{sup 3}) interfaces through the movement of oxygen ions by bias with photo-irradiation because they have wavelength selectivity and require air exposuremore » for several days to exhibit memristive behavior. These results indicate that graphene-diamond, carbon sp{sup 2}-sp{sup 3} heterojunctions can be used as photo-controllable devices with both photomemory and photoswitching functions.« less

Parasitic arthropods of some wild rodents from Juréia-Itatins Ecological Station, State of São Paulo, Brazil.

PubMed

Bossi, David Eduardo Paolinetti; Linhares, Arício Xavier; Bergallo, Helena de Godoy

2002-10-01

A study of the associations between three species of rodents in the Atlantic forest and their parasitic arthropods was undertaken at the Juréia-Itatins Ecological Station, located in the State of São Paulo, Southeastern Brazil, from March 1989 to February 1990. Individuals of three species, Oryzomys russatus, Proechimys iheringi and Nectomys squamipes were captured and examined for ectoparasites. Eleven species of parasitic arthropods were found, including four species of insects and seven of Acari. Parasitism intensity, phenology, and rainfall were positively correlated with the abundance of the ectoparasites and their hosts. The most abundant host was O. russatus (Muridae: Sigmodontinae), and the most common parasite on it was the laelapid mite Gigantolaelaps oudemansi. The cuterebrid Metacuterebra apicalis caused myiasis in O. russatus. A mutualistic association between the staphylinid beetle Amblyopinus sp. and its host P. iheringi (Echimyidae) was observed. The few N. squamipes captured had small numbers of ectoparasites.

Plant-soil feedbacks and mycorrhizal type influence temperate forest population dynamics

USDA-ARS?s Scientific Manuscript database

Feedback with soil biota is a major driver of diversity within terrestrial plant communities. However, little is known about the factors regulating plant-soil feedback, which can vary from positive to negative among plant species. In a large-scale observational and experimental study involving 55 sp...

Tree mortality risk of oak due to gypsy moth

Treesearch

K.W. Gottschalk; J.J. Colbert; D.L. Feicht

1998-01-01

We present prediction models for estimating tree mortality resulting from gypsy moth, Lymantria dispar, defoliation in mixed oak, Quercus sp., forests. These models differ from previous work by including defoliation as a factor in the analysis. Defoliation intensity, initial tree crown condition (crown vigour), crown position, and...

Two new species of frogs of the genus Pristimantis from Llanganates National Park in Ecuador with comments on the regional diversity of Ecuadorian Pristimantis (Anura, Craugastoridae).

PubMed

Navarrete, María J; Venegas, Pablo J; Ron, Santiago R

2016-01-01

We describe two new species of frogs of the genus Pristimantis from the eastern slopes of the Ecuadorian Andes, at Parque Nacional Llanganates. The new species are characterized by the spiny appearance typical of several species inhabiting montane forests. Pristimantis yanezi sp. n. is most similar to Pristimantis colonensis and Pristimantis incanus but differs from both in groin coloration and by having smaller tubercles on the upper eyelids, heels, and tarsus. Pristimantis llanganati sp. n. is most similar to Pristimantis eriphus and Pristimantis chloronotus. It can be distinguished from Pristimantis eriphus by the color pattern on the scapular region and by having smaller conical tubercles on the dorsum. Pristimantis chloronotus differs from Pristimantis llanganati sp. n. in having a pair of sinuous paravertebral folds. Both new species occur in a region with few amphibian collections and nothing is known about their abundance and ecology. Therefore, it is recommended to assign them to the Data Deficient Red List category. Updated figures of species richness of Pristimantis among biogeographic regions in Ecuador are also presented. Pristimantis reach their highest diversity in Montane Forests of the eastern versant of the Andes. Its species richness across regions cannot be explained by regional area, elevation, temperature, or precipitation. Political endemism in Pristimantis is higher than that of other terrestrial vertebrates.

Description of a marine nematode Hopperia sinensis sp. nov. (Comesomatidae) from mangrove forests of Quanzhou, China, with a pictorial key to Hopperia species

NASA Astrophysics Data System (ADS)

Guo, Yuqing; Chang, Yu; Chen, Yuzhen; Li, Yongxiang; Liu, Aiyuan

2015-12-01

A new free-living marine nematode species Hopperia sinensis sp. nov. from mangrove forests of Fujian Province, China, is identified and illustrated. Hopperia sinensis sp. nov. is characterized by its cephalic setae 2.4-2.8 µm long or 17%-20% head diameter, and amphids of 2.25-2.5 turns. Lateral differentiation appears with larger, more irregularly distributed dots behind 3-5 transverse rows of dots posterior to amphid. Buccal cavity is consisted of a shallow and weakly sclerotized cup-shaped portion with strongly sclerotized walls of 18-21 µm deep. There are three sclerotized and size-equally pointed teeth at the junction between the two parts. Spicules of 41-45 µm long are slightly curved with broadband velum and central strips at the proximal end. The gubernacula, with apparent lateral guiding pieces, are formed by one central tubular piece that is weakly sclerotized with 11-16 µm long dorso-caudally directed apophyses. There are 13-14 fine tubular precloacal supplements. Conico-cylindrical tail gradually tapers till pointed tail tip. Female is similar to male, but have a longer body and tail. Ovaries are opposed and outstretched, with anterior ovary to the left and posterior ovary to the right of the intestine. A pictorial key to all the valid known species in genus Hopperia is given.

Evidence that the Ceratobasidium-like white-thread blight and black rot fungal pathogens from persimmon and tea crops in the Brazilian Atlantic Forest agroecosystem are two distinct phylospecies.

PubMed

Ceresini, Paulo C; Costa-Souza, Elaine; Zala, Marcello; Furtado, Edson L; Souza, Nilton L

2012-04-01

The white-thread blight and black rot (WTBR) caused by basidiomycetous fungi of the genus Ceratobasidium is emerging as an important plant disease in Brazil, particularly for crop species in the Ericales such as persimmon (Diospyros kaki) and tea (Camellia sinensis). However, the species identity of the fungal pathogen associated with either of these hosts is still unclear. In this work, we used sequence variation in the internal transcribed spacer regions, including the 5.8S coding region of rDNA (ITS-5.8S rDNA), to determine the phylogenetic placement of the local white-thread-blight-associated populations of Ceratobasidium sp. from persimmon and tea, in relation to Ceratobasidium species already described world-wide. The two sister populations of Ceratobasidium sp. from persimmon and tea in the Brazilian Atlantic Forest agroecosystem most likely represent distinct species within Ceratobasidium and are also distinct from C. noxium, the etiological agent of the first description of white-thread blight disease that was reported on coffee in India. The intraspecific variation for the two Ceratobasidium sp. populations was also analyzed using three mitochondrial genes (ATP6, nad1 and nad2). As reported for other fungi, variation in nuclear and mitochondrial DNA was incongruent. Despite distinct variability in the ITS-rDNA region these two populations shared similar mitochondrial DNA haplotypes.

Ninety-eight new species of Trigonopterus weevils from Sundaland and the Lesser Sunda Islands

PubMed Central

Riedel, Alexander; Tänzler, Rene; Balke, Michael; Rahmadi, Cahyo; Suhardjono, Yayuk R.

2014-01-01

Abstract The genus Trigonopterus Fauvel, 1862 is highly diverse in Melanesia. Only one species, Trigonopterus amphoralis Marshall, 1925 was so far recorded West of Wallace’s Line (Eastern Sumatra). Based on focused field-work the fauna from Sundaland (Sumatra, Java, Bali, Palawan) and the Lesser Sunda Islands (Lombok, Sumbawa, Flores) is here revised. We redescribe Trigonopterus amphoralis Marshall and describe an additional 98 new species: Trigonopterus acuminatus sp. n., Trigonopterus aeneomicans sp. n., Trigonopterus alaspurwensis sp. n., Trigonopterus allopatricus sp. n., Trigonopterus allotopus sp. n., Trigonopterus angulicollis sp. n., Trigonopterus argopurensis sp. n., Trigonopterus arjunensis sp. n., Trigonopterus asper sp. n., Trigonopterus attenboroughi sp. n., Trigonopterus baliensis sp. n., Trigonopterus batukarensis sp. n., Trigonopterus bawangensis sp. n., Trigonopterus binodulus sp. n., Trigonopterus bornensis sp. n., Trigonopterus cahyoi sp. n., Trigonopterus costipennis sp. n., Trigonopterus cuprescens sp. n., Trigonopterus cupreus sp. n., Trigonopterus dacrycarpi sp. n., Trigonopterus delapan sp. n., Trigonopterus dentipes sp. n., Trigonopterus diengensis sp. n., Trigonopterus dimorphus sp. n., Trigonopterus disruptus sp. n., Trigonopterus dua sp. n., Trigonopterus duabelas sp. n., Trigonopterus echinatus sp. n., Trigonopterus empat sp. n., Trigonopterus enam sp. n., Trigonopterus fissitarsis sp. n., Trigonopterus florensis sp. n., Trigonopterus foveatus sp. n., Trigonopterus fulgidus sp. n., Trigonopterus gedensis sp. n., Trigonopterus halimunensis sp. n., Trigonopterus honjensis sp. n., Trigonopterus ijensis sp. n., Trigonopterus javensis sp. n., Trigonopterus kalimantanensis sp. n., Trigonopterus kintamanensis sp. n., Trigonopterus klatakanensis sp. n., Trigonopterus lampungensis sp. n., Trigonopterus latipes sp. n., Trigonopterus lima sp. n., Trigonopterus lombokensis sp. n., Trigonopterus merubetirensis sp. n., Trigonopterus mesehensis sp. n., Trigonopterus micans sp. n., Trigonopterus misellus sp. n., Trigonopterus palawanensis sp. n., Trigonopterus pangandaranensis sp. n., Trigonopterus paraflorensis sp. n., Trigonopterus pararugosus sp. n., Trigonopterus parasumbawensis sp. n., Trigonopterus pauxillus sp. n., Trigonopterus payungensis sp. n., Trigonopterus porcatus sp. n., Trigonopterus pseudoflorensis sp. n., Trigonopterus pseudosumbawensis sp. n., Trigonopterus punctatoseriatus sp. n., Trigonopterus ranakensis sp. n., Trigonopterus relictus sp. n., Trigonopterus rinjaniensis sp. n., Trigonopterus roensis sp. n., Trigonopterus rugosostriatus sp. n., Trigonopterus rugosus sp. n., Trigonopterus rutengensis sp. n., Trigonopterus saltator sp. n., Trigonopterus santubongensis sp. n., Trigonopterus sasak sp. n., Trigonopterus satu sp. n., Trigonopterus schulzi sp. n., Trigonopterus sebelas sp. n., Trigonopterus sembilan sp. n., Trigonopterus sepuluh sp. n., Trigonopterus seriatus sp. n., Trigonopterus serratifemur sp. n., Trigonopterus setifer sp. n., Trigonopterus silvestris sp. n., Trigonopterus singkawangensis sp. n., Trigonopterus singularis sp. n., Trigonopterus sinuatus sp. n., Trigonopterus squalidus sp. n., Trigonopterus sumatrensis sp. n., Trigonopterus sumbawensis sp. n., Trigonopterus sundaicus sp. n., Trigonopterus suturalis sp. n., Trigonopterus syarbis sp. n., Trigonopterus telagensis sp. n., Trigonopterus tepalensis sp. n., Trigonopterus tiga sp. n., Trigonopterus trigonopterus sp. n., Trigonopterus tujuh sp. n., Trigonopterus ujungkulonensis sp. n., Trigonopterus variolosus sp. n., Trigonopterus vulcanicus sp. n., Trigonopterus wallacei sp. n.. All new species are authored by the taxonomist-in-charge, Alexander Riedel. Most species belong to the litter fauna of primary wet evergreen forests. This habitat has become highly fragmented in the study area and many of its remnants harbor endemic species. Conservation measures should be intensified, especially in smaller and less famous sites to minimize the number of species threatened by extinction. PMID:25610340

Collection of nontimber forest products from state forests in the US south

Treesearch

Gregory E. Frey; James Chamberlain

2016-01-01

Little is known about the harvest of nontimber forest products (NTFPs) in state forests of the US South. We asked the state forestry agencies in all 13 southern states about the products harvested and the policies regulating harvest, as well as evidence of illegal harvest and the effects of  harvest on biodiversity. Of the 12 southern states that have state forests, 7...

Multiple value forest surveys in the Midsouth states

Treesearch

Victor A. Rudis

1990-01-01

State-of-the-art achievement and limitations in integrating water, range, wildlife, and recreation ("nontimber") inventories with forest surveys of the USDA-Forest Service, Southern Forest Experiment station, Forest Inventory and Analysis (FIA) Unit are reviewed.The FIA Unit surveys private and public forests in 7 Midsouth states:Alabama, Arkansas, Louisiana...

A new species of Physalaemus (Anura, Leptodactylidae) from the Atlantic Forest of Misiones, northeastern Argentina.

PubMed

Cardozo, Dario E; Pereyra, Martin O

2018-02-27

A new species of Physalaemus from Misiones province, Argentina, in the Atlantic forest domain is described. The new species is a member of the P. gracilis group, based on its phylogenetic position and the occurrence of a putative morphological synapomorphy (occurrence of an unpigmented median stripe on throat, chest, and/or abdomen). Physalaemus sp. nov. is characterized by a long advertisement call composed of non-pulsed notes with slightly descendant modulation, large size (mean SVL = 32.0 mm males, 34.0 mm females), slender body aspect, head longer than wide, supratympanic fold developed, an unpigmented median stripe on venter, medium sized inguinal glands, tarsal tubercle present, and supernumerary tubercles on hands and feet, which are character states that combined distinguish the new species from all the members of the genus. In this study, we provide its formal description based on external morphology, advertisement call, and 16S genetic distance. In addition, the distribution ranges for the new species and P. gracilis are revisited, the advertisement call of P. gracilis is redescribed, and a discussion about the available names which could be applicable to the new species is provided.

Purification, characterization and immunolocalization of porcine surfactant protein D

PubMed Central

Soerensen, C M; Nielsen, O L; Willis, A; Heegaard, P M H; Holmskov, U

2005-01-01

Surfactant protein D (SP-D) is a collectin believed to play an important role in innate immunity. SP-D is characterized by having a collagen-like domain and a carbohydrate recognition domain (CRD), which has a specific Ca2+-dependent specificity for saccharides and thus the ability to bind complex glycoconjugates on micro-organisms. This paper describes the tissue immunolocalization of porcine SP-D (pSP-D) in normal slaughter pigs using a monoclonal antibody raised against purified pSP-D. Porcine SP-D was purified from porcine bronchoalveolar lavage (BAL) by maltose-agarose and immunoglobulin M affinity chromatography. The purified protein appeared on sodium dodecyl sulphate–polyacrylamide gel electrophoresis as a band of ∼53 000 MW in the reduced state and ∼138 000 MW in the unreduced state. Porcine SP-D was sensitive to collagenase digestion and N-deglycosylation, which reduced the molecular mass to ∼24 000 MW and ∼48 000 MW respectively, in the reduced state. N-deglycosylation of the collagen-resistant fragment, reduced the molecular mass to ∼21 000 MW showing the presence of an N-glycosylation site located in the CRD. Porcine SP-D bound to solid-phase mannan in a dose and Ca2+-dependent manner with a saccharide specificity similar to rat and human SP-D. The purified protein was used for the production of a monoclonal anti-pSP-D antibody. The antibody reacted specifically with pSP-D in the reduced and unreduced state when analysed by Western blotting. Immunohistochemical evaluation of normal porcine tissues showed pSP-D immunoreactivity predominantly in Clara cells and serous cells of the bronchial submucosal glands, and to a lesser extent in alveolar type II cells, epithelial cells of the intestinal glands (crypts of Lieberkühn) in the duodenum, jejunum and ileum and serous cells of the dorsolateral lacrimal gland. PMID:15606797

Fungal Planet description sheets: 625-715.

PubMed

Crous, P W; Wingfield, M J; Burgess, T I; Carnegie, A J; Hardy, G E St J; Smith, D; Summerell, B A; Cano-Lira, J F; Guarro, J; Houbraken, J; Lombard, L; Martín, M P; Sandoval-Denis, M; Alexandrova, A V; Barnes, C W; Baseia, I G; Bezerra, J D P; Guarnaccia, V; May, T W; Hernández-Restrepo, M; Stchigel, A M; Miller, A N; Ordoñez, M E; Abreu, V P; Accioly, T; Agnello, C; Agustin Colmán, A; Albuquerque, C C; Alfredo, D S; Alvarado, P; Araújo-Magalhães, G R; Arauzo, S; Atkinson, T; Barili, A; Barreto, R W; Bezerra, J L; Cabral, T S; Camello Rodríguez, F; Cruz, R H S F; Daniëls, P P; da Silva, B D B; de Almeida, D A C; de Carvalho Júnior, A A; Decock, C A; Delgat, L; Denman, S; Dimitrov, R A; Edwards, J; Fedosova, A G; Ferreira, R J; Firmino, A L; Flores, J A; García, D; Gené, J; Giraldo, A; Góis, J S; Gomes, A A M; Gonçalves, C M; Gouliamova, D E; Groenewald, M; Guéorguiev, B V; Guevara-Suarez, M; Gusmão, L F P; Hosaka, K; Hubka, V; Huhndorf, S M; Jadan, M; Jurjević, Ž; Kraak, B; Kučera, V; Kumar, T K A; Kušan, I; Lacerda, S R; Lamlertthon, S; Lisboa, W S; Loizides, M; Luangsa-Ard, J J; Lysková, P; Mac Cormack, W P; Macedo, D M; Machado, A R; Malysheva, E F; Marinho, P; Matočec, N; Meijer, M; Mešić, A; Mongkolsamrit, S; Moreira, K A; Morozova, O V; Nair, K U; Nakamura, N; Noisripoom, W; Olariaga, I; Oliveira, R J V; Paiva, L M; Pawar, P; Pereira, O L; Peterson, S W; Prieto, M; Rodríguez-Andrade, E; Rojo De Blas, C; Roy, M; Santos, E S; Sharma, R; Silva, G A; Souza-Motta, C M; Takeuchi-Kaneko, Y; Tanaka, C; Thakur, A; Smith, M Th; Tkalčec, Z; Valenzuela-Lopez, N; van der Kleij, P; Verbeken, A; Viana, M G; Wang, X W; Groenewald, J Z

2017-12-01

Novel species of fungi described in this study include those from various countries as follows: Antarctica : Cadophora antarctica from soil. Australia : Alfaria dandenongensis on Cyperaceae , Amphosoma persooniae on Persoonia sp., Anungitea nullicana on Eucalyptus sp . , Bagadiella eucalypti on Eucalyptus globulus , Castanediella eucalyptigena on Eucalyptus sp., Cercospora dianellicola on Dianella sp., Cladoriella kinglakensis on Eucalyptus regnans , Cladoriella xanthorrhoeae (incl. Cladoriellaceae fam. nov. and Cladoriellales ord. nov.) on Xanthorrhoea sp., Cochlearomyces eucalypti (incl. Cochlearomyces gen. nov. and Cochlearomycetaceae fam. nov.) on Eucalyptus obliqua , Codinaea lambertiae on Lambertia formosa , Diaporthe obtusifoliae on Acacia obtusifolia , Didymella acaciae on Acacia melanoxylon , Dothidea eucalypti on Eucalyptus dalrympleana , Fitzroyomyces cyperi (incl. Fitzroyomyces gen. nov.) on Cyperaceae , Murramarangomyces corymbiae (incl. Murramarangomyces gen. nov., Murramarangomycetaceae fam. nov. and Murramarangomycetales ord. nov.) on Corymbia maculata , Neoanungitea eucalypti (incl. Neoanungitea gen. nov.) on Eucalyptus obliqua , Neoconiothyrium persooniae (incl. Neoconiothyrium gen. nov.) on Persoonia laurina subsp. laurina , Neocrinula lambertiae (incl. Neocrinulaceae fam. nov.) on Lambertia sp., Ochroconis podocarpi on Podocarpus grayae , Paraphysalospora eucalypti (incl. Paraphysalospora gen. nov.) on Eucalyptus sieberi , Pararamichloridium livistonae (incl. Pararamichloridium gen. nov., Pararamichloridiaceae fam. nov. and Pararamichloridiales ord. nov.) on Livistona sp., Pestalotiopsis dianellae on Dianella sp., Phaeosphaeria gahniae on Gahnia aspera , Phlogicylindrium tereticornis on Eucalyptus tereticornis , Pleopassalora acaciae on Acacia obliquinervia , Pseudodactylaria xanthorrhoeae (incl. Pseudodactylaria gen. nov., Pseudodactylariaceae fam. nov. and Pseudodactylariales ord. nov.) on Xanthorrhoea sp., Pseudosporidesmium lambertiae (incl. Pseudosporidesmiaceae fam. nov.) on Lambertia formosa , Saccharata acaciae on Acacia sp., Saccharata epacridis on Epacris sp., Saccharata hakeigena on Hakea sericea , Seiridium persooniae on Persoonia sp., Semifissispora tooloomensis on Eucalyptus dunnii , Stagonospora lomandrae on Lomandra longifolia , Stagonospora victoriana on Poaceae , Subramaniomyces podocarpi on Podocarpus elatus , Sympoventuria melaleucae on Melaleuca sp . , Sympoventuria regnans on Eucalyptus regnans , Trichomerium eucalypti on Eucalyptus tereticornis , Vermiculariopsiella eucalypticola on Eucalyptus dalrympleana , Verrucoconiothyrium acaciae on Acacia falciformis , Xenopassalora petrophiles (incl. Xenopassalora gen. nov.) on Petrophile sp . , Zasmidium dasypogonis on Dasypogon sp., Zasmidium gahniicola on Gahnia sieberiana. Brazil : Achaetomium lippiae on Lippia gracilis , Cyathus isometricus on decaying wood, Geastrum caririense on soil, Lycoperdon demoulinii (incl. Lycoperdon subg. Arenicola ) on soil, Megatomentella cristata (incl. Megatomentella gen. nov.) on unidentified plant, Mutinus verrucosus on soil, Paraopeba schefflerae (incl. Paraopeba gen. nov.) on Schefflera morototoni , Phyllosticta catimbauensis on Mandevilla catimbauensis , Pseudocercospora angularis on Prunus persica , Pseudophialophora sorghi on Sorghum bicolor , Spumula piptadeniae on Piptadenia paniculata. Bulgaria : Yarrowia parophonii from gut of Parophonus hirsutulus . Croatia : Pyrenopeziza velebitica on Lonicera borbasiana. Cyprus : Peziza halophila on coastal dunes. Czech Republic : Aspergillus contaminans from human fingernail. Ecuador : Cuphophyllus yacurensis on forest soil, Ganoderma podocarpense on fallen tree trunk. England : Pilidium anglicum (incl. Chaetomellales ord. nov.) on Eucalyptus sp. France : Planamyces parisiensis (incl. Planamyces gen. nov.) on wood inside a house. French Guiana : Lactifluus ceraceus on soil. Germany : Talaromyces musae on Musa sp. India : Hyalocladosporiella cannae on Canna indica , Nothophoma raii from soil. Italy : Setophaeosphaeria citri on Citrus reticulata , Yuccamyces citri on Citrus limon. Japan : Glutinomyces brunneus (incl. Glutinomyces gen. nov.) from roots of Quercus sp. Netherlands (all from soil): Collariella hilkhuijsenii , Fusarium petersiae , Gamsia kooimaniorum , Paracremonium binnewijzendii , Phaeoisaria annesophieae , Plectosphaerella niemeijerarum , Striaticonidium deklijnearum , Talaromyces annesophieae , Umbelopsis wiegerinckiae , Vandijckella johannae (incl. Vandijckella gen. nov. and Vandijckellaceae fam. nov.), Verhulstia trisororum (incl. Verhulstia gen. nov.). New Zealand : Lasiosphaeria similisorbina on decorticated wood. Papua New Guinea : Pseudosubramaniomyces gen. nov. (based on Pseudosubramaniomyces fusisaprophyticus comb. nov.). Slovakia : Hemileucoglossum pusillum on soil. South Africa : Tygervalleyomyces podocarpi (incl. Tygervalleyomyces gen. nov.) on Podocarpus falcatus. Spain : Coniella heterospora from herbivorous dung, Hymenochaete macrochloae on Macrochloa tenacissima , Ramaria cistophila on shrubland of Cistus ladanifer. Thailand : Polycephalomyces phaothaiensis on Coleoptera larvae, buried in soil. Uruguay : Penicillium uruguayense from soil. Vietnam : Entoloma nigrovelutinum on forest soil, Volvariella morozovae on wood of unknown tree. Morphological and culture characteristics along with DNA barcodes are provided.

Sourcebook on Criteria and Indicators of Forest Sustainability in the Northeastern Area

Treesearch

USDA Forest Service, Northeastern Area State and Private Forestry; Northeastern Forest Resource Planners Association; Northeastern Area Association of State Foresters

2002-01-01

This sourcebook represents a collaborative effort between the USDA Forest Service, Northeastern Area, State and Private Forestry; the Northeastern Area Association of State Foresters; and the Northeastern Forest Resource Planners Association to address the issue of measuring forest sustainability. Forest Service and State resource professionals work to facilitate the...

Looking back to move forward: collaborative planning to revise the Green Mountain and Finger Lakes National Forests land and resource management plans

Treesearch

Michael J. Dockry

2015-01-01

The United States Department of Agriculture Forest Service (Forest Service) manages 154 national forests and 20 grasslands in 44 states and Puerto Rico. National Forest Land and Resource Management Plans (forest plans) form the basis for land and resource management of national forests in the United States. For more than a decade the Forest Service has been attempting...

Restoration of mangrove forest landscape in Babulu Laut village, sub district of Babulu, Penajam Paser Utara district

NASA Astrophysics Data System (ADS)

Febrina, W. K.; Marjenah; Sumaryono

2018-04-01

The reforestation activities of mangrove forest carried out in various regions have not been well known as the success and influence of landscape in rehabilitation area. Utilization of existing land along the coastal Babulu Laut Village has reduced the area of mangrove forest from day to day. Due to the use of land by the community without considering the conservation aspect causes the loss of mangrove forest. This study aims to determine the final condition of the success rate of forest and land rehabilitation, land cover and the benefits of mangrove forest restoration for the surrounding people. The research method used is the preparation and orientation of research location, data input, codefication, data processing, the field verification and analysis of data. The results of the execution of the inventory mangrove in 22 research location in the Babulu Laut Village, Babulu Subdistrict, Penajam Paser Utara District of 125 ha of plant a whole is kind of Rhizophora sp, where the intensity of sampling 2% with the growing plants of 65.92 %or 2,175 stem/ha then success rate of Mangrove Forest Rehabilitation at Babulu Laut Village Babulu Subdistrict is medium level (55-75%).

Proceedings of the fourth Lake States forest tree improvement conference

Treesearch

Lake States Forest Experiment Station

1960-01-01

The Lake States Forest Experiment Station is glad to facilitate the work of the Lake States Forest Tree Improvement Committee in encouraging and coordinating forest genetics activities in this region. We are happy, therefore, to publish this Proceedings of the Fourth Lake States Forest Tree Improvement Conference, as we did for the preceding three conferences in 1953,...

Proceedings of the fifth Lake States forest tree improvement conference

Treesearch

Lake States Forest Experiment Station

1962-01-01

The Lake States Forest Experiment Station has given active support to the Lake States Forest Tree Improvement Committee since the Committee's inception in 1953. In the interests of encouraging and coordinating forest genetics activities in this region, we are happy to publish this Proceedings of the Fifth Lake States Forest Tree Improvement Conference, as we did...

Quantitative approach to track lipase producing Pseudomonas sp. S1 in nonsterilized solid state fermentation.

PubMed

Sahoo, R K; Subudhi, E; Kumar, M

2014-06-01

Proliferation of the inoculated Pseudomonas sp. S1 is quantitatively evaluated using ERIC-PCR during the production of lipase in nonsterile solid state fermentation an approach to reduce the cost of enzyme production. Under nonsterile solid state fermentation with olive oil cake, Pseudomonas sp. S1 produced 57·9 IU g(-1) of lipase. DNA fingerprints of unknown bacterial isolates obtained on Bushnell Haas agar (BHA) + tributyrin exactly matched with that of Pseudomonas sp. S1. Using PCR-based enumeration, population of Pseudomonas sp. S1 was proliferated from 7·6 × 10(4) CFU g(-1) after 24 h to 4·6 × 10(8) CFU g(-1) after 96 h, which tallied with the maximum lipase activity as compared to control. Under submerged fermentation (SmF), Pseudomonas sp. S1 produced maximum lipase (49 IU ml(-1) ) using olive oil as substrate, while lipase production was 9·754 IU ml(-1) when Pseudomonas sp. S1 was grown on tributyrin. Optimum pH and temperature of the crude lipase was 7·0 and 50°C. Crude enzyme activity was 71·2% stable at 50°C for 360 min. Pseudomonas sp. S1 lipase was also stable in methanol showing 91·6% activity in the presence of 15% methanol, whereas 75·5 and 51·1% of activity were retained in the presence of 20 and 30% methanol, respectively. Thus, lipase produced by Pseudomonas sp. S1 is suitable for the production of biodiesel as well as treatment of oily waste water. This study presents the first report on the production of thermophilic organic solvent tolerant lipase using agro-industry waste in nonsterile solid state fermentation. Positive correlation between survival of Pseudomonas sp. S1 and lipase production under nonsterile solid state fermentation was established, which may emphasize the need to combine molecular tools and solid state fermentation in future studies. Our study brings new insights into the lipase production in cost-effective manner, which is an industrially relevant approach. © 2014 The Society for Applied Microbiology.

Bryophryne phuyuhampatu sp. n., a new species of Cusco Andes frog from the cloud forest of the eastern slopes of the Peruvian Andes (Amphibia, Anura, Craugastoridae)

PubMed Central

Catenazzi, Alessandro; Ttito, Alex; Diaz, M. Isabel; Shepack, Alexander

2017-01-01

Abstract A new species of Bryophryne from the humid montane forest of the Department of Cusco, Peru, is described. Specimens were collected at 2795–2850 m a.s.l. in the Área de Conservación Privada Ukumari Llaqta, Quispillomayo valley, in the province of Paucartambo. The new species is readily distinguished from all other species of Bryophryne by having green coloration on dorsum, and blue flecks on flanks and ventral parts. Specimens are characterized by lacking a distinct tympanic annulus, tympanic membrane, and dentigerous processes of vomers, and by having dorsal skin shagreen, discontinuous dorsolateral folds, skin tuberculate on flanks, skin areolate on ventral surfaces of the body, and fingers and toes without lateral fringes or webbing. The new species has a snout–vent length of 14.2–16.9 mm in three males and 22.2–22.6 mm in two females, and is smaller than all other congeneric species except for B. abramalagae. Generic allocation is supported by low genetic distances of the 16S mitochondrial gene and morphological similarity with other species of Bryophryne, and geographic distribution. Bryophryne phuyuhampatu sp. n. is only known from the type locality, a cloud forest along the Quispillomayo River in the upper Nusiniscato watershed. PMID:29089838

On experimental damage localization by SP2E: Application of H∞ estimation and oblique projections

NASA Astrophysics Data System (ADS)

Lenzen, Armin; Vollmering, Max

2018-05-01

In this article experimental damage localization based on H∞ estimation and state projection estimation error (SP2E) is studied. Based on an introduced difference process, a state space representation is derived for advantageous numerical solvability. Because real structural excitations are presumed to be unknown, a general input is applied therein, which allows synchronization and normalization. Furthermore, state projections are introduced to enhance damage identification. While first experiments to verify method SP2E have already been conducted and published, further laboratory results are analyzed here. Therefore, SP2E is used to experimentally localize stiffness degradations and mass alterations. Furthermore, the influence of projection techniques is analyzed. In summary, method SP2E is able to localize structural alterations, which has been observed by results of laboratory experiments.

Heriades tayrona n. sp., the first osmiine bee from South America (Hymenoptera: Megachilidae)

USDA-ARS?s Scientific Manuscript database

A new species of Heriades Spinola, H. tayrona, is described and figured based on females collected in a tropical dry forest of the Caribbean coast of Colombia. Heriades tayrona is distinguished from other species in the subgenus Neotrypetes and a summary of the known distribution of the subgenus is ...

A new Pyemotes (Acari: Pyemotidae) reared from the Douglas-fir cone moth

Treesearch

J.C. Moser; R.L. Smiley; I.S. Otvos

1987-01-01

Pyemotes barbara, n. sp., is illustrated and described.This species is parasitic on pupae of Barbara colfaxiana (Kearfott), one of the important cone and seed pests of Douglas-fir, Pseudotsuga menziesii (Mirbel) Franco.The Pyemotes mite considered here is a candidate for the biological control of forest insects.

Interactions among soil biology, nutrition, and performance of actinorhizal plant species in the H.J. Andrews Experimental Forest of Oregon.

Treesearch

N.S. Rojas; D.A. Perry; C.Y. Li; L.M. Ganio

2002-01-01

The study examined the effect of Frankia, macronutrients, micronutrients, mycorrhizal fungi, and plant-growth-promoting fluorescent Pseudomonas sp. on total biomass, nodule weight, and nitrogen fixation of red aider (Alnus rubra) and snowbrush (Ceanothus velutinus) under greenhouse conditions. The soil...

Vertically Stratified Ash-Limb Beetle Fauna in Northern Ohio

Treesearch

Michael D. Ulyshen; William T. Barrington; Richard E. Hoebeke; Daniel A. Herms

2012-01-01

To better understand the diversity and ecology of indigenous arthropods at risk from the invasive emerald ash borer (Agrilus planipennis Fairmaire) in North American forests, saproxylic beetles (Insecta: Coleoptera) were reared from ash (Fraxinus sp.) limbs suspended in the canopy, ~10–17m above the ground, and from those placed on...

Morchella australiana sp. nov., an apparent Australian endemic from New South Wales and Victoria

USDA-ARS?s Scientific Manuscript database

An abundant fruiting of a black morel was encountered in temperate northwestern New South Wales (NSW), Australia, during a mycological survey in August 2010. The collection site was west of the Great Dividing Range in a young, dry sclerophyll woodland forest dominated by Eucalyptus and Callitris nor...

A new species of Stilestrongylus (Nematoda, Heligmonellidae) from the Atlantic Forest of Misiones, Argentina, parasitic in Euryoryzomys russatus (Cricetidae, Sigmodontinae).

PubMed

Panisse, Guillermo; Digiani, María Celina

2018-04-01

A new species of Heligmonellidae (Trichostrongylina, Heligmosomoidea), Stilestrongylus kaaguyporai n. sp. is described from the small intestine of Euryoryzomys russatus (Rodentia, Cricetidae, Sigmodontinae) from the Argentine Atlantic Forest, in the Misiones province. The new species was found at Campo Anexo Manuel Belgrano, Reserva de Vida Silvestre Urugua-í and Parque Provincial Urugua-í, with a prevalence of 73% in 15 hosts examined. Stilestrongylus includes 24 Neotropical species, all parasitic in rodents, mostly Sigmodontinae. Stilestrongylus kaaguyporai n. sp. can be differentiated from its congeners by the following characters: caudal bursa dissymmetrical with right lobe larger and pattern of type1-4 in both lobes, rays 6 not forming a lateral trident with rays 4 and 5, rays 8 with dissymmetrical pathway, genital cone hypertrophied with a conspicuous hood-like projection and females with a marked dorso-ventral torsion of the posterior end. This report is the second record of a Stilestrongylus species in E. russatus, increasing to nine the number of parasitic species known from this host.

Northeastern Area State and Private Forestry At a Glance

Treesearch

Northeastern Area, State & Private Forestry USDA Forest Service

2006-01-01

The State and Private Forestry branch of the USDA Forest Service promotes sustainable management of non-Federal forest lands, which make up two-thirds of the forests in the United States. This work supports the Forest Service?s role as steward of the Nation?s forests and ensures that private forests yield public benefits. Among these benefits are clean air, drinking...

Region-wide monitoring of exotic pest plants in southeastern forests by Forest Service and State Partners

Treesearch

James H. Miller

2001-01-01

The USDA Forest Service Research in partnership with State forestry agencies has initiated monitoring of 32 exotic plant tasa invading forests in the 13 southeastern States. The monitoring is on all forestlands, all ownerships, and is a recent addition to the National Forest Resources Inventory, ongoing since the 1930's. This is the first multi-state survey of...

Spin-Projected Matrix Product States: Versatile Tool for Strongly Correlated Systems.

PubMed

Li, Zhendong; Chan, Garnet Kin-Lic

2017-06-13

We present a new wave function ansatz that combines the strengths of spin projection with the language of matrix product states (MPS) and matrix product operators (MPO) as used in the density matrix renormalization group (DMRG). Specifically, spin-projected matrix product states (SP-MPS) are constructed as [Formula: see text], where [Formula: see text] is the spin projector for total spin S and |Ψ MPS (N,M) ⟩ is an MPS wave function with a given particle number N and spin projection M. This new ansatz possesses several attractive features: (1) It provides a much simpler route to achieve spin adaptation (i.e., to create eigenfunctions of Ŝ 2 ) compared to explicitly incorporating the non-Abelian SU(2) symmetry into the MPS. In particular, since the underlying state |Ψ MPS (N,M) ⟩ in the SP-MPS uses only Abelian symmetries, one does not need the singlet embedding scheme for nonsinglet states, as normally employed in spin-adapted DMRG, to achieve a single consistent variationally optimized state. (2) Due to the use of |Ψ MPS (N,M) ⟩ as its underlying state, the SP-MPS can be closely connected to broken-symmetry mean-field states. This allows one to straightforwardly generate the large number of broken-symmetry guesses needed to explore complex electronic landscapes in magnetic systems. Further, this connection can be exploited in the future development of quantum embedding theories for open-shell systems. (3) The sum of MPOs representation for the Hamiltonian and spin projector [Formula: see text] naturally leads to an embarrassingly parallel algorithm for computing expectation values and optimizing SP-MPS. (4) Optimizing SP-MPS belongs to the variation-after-projection (VAP) class of spin-projected theories. Unlike usual spin-projected theories based on determinants, the SP-MPS ansatz can be made essentially exact simply by increasing the bond dimensions in |Ψ MPS (N,M) ⟩. Computing excited states is also simple by imposing orthogonality constraints, which are simple to implement with MPS. To illustrate the versatility of SP-MPS, we formulate algorithms for the optimization of ground and excited states, develop perturbation theory based on SP-MPS, and describe how to evaluate spin-independent and spin-dependent properties such as the reduced density matrices. We demonstrate the numerical performance of SP-MPS with applications to several models typical of strong correlation, including the Hubbard model, and [2Fe-2S] and [4Fe-4S] model complexes.

DNA barcode and phylogeography of six new high altitude wingless Niphadomimus (Coleoptera: Curculionidae: Molytinae) from Southwest China.

PubMed

Grebennikov, Vasily V

2014-07-17

The genus Niphadomimus Zherikhin, 1987 is taxonomically revised herein. In addition to the two recorded Nepalese species, N. nigriventris Zherikhin and N. niger Zherikhin, known only from the holotypes, two additional specimens of N. nigriventris are reported and six new species from China represented by 96 specimens are described and illustrated. These are: N. alcyone sp. n. (Sichuan), N. celaeno sp. n. (Yunnan), N. electra sp. n. (Yunnan), N. maia sp. n. (Yunnan), N. merope sp. n. (Shaanxi) and N. sterope sp. n. (Sichuan). All known Niphadomimus species are apterous inhabitants of the leaf litter in the upper Rhododendron-dominated forest zone between 2000 and 4114 m. Phylogenetic analyses using DNA barcodes of six new species and representatives of 13 other Molytinae genera with available DNA data (A.) corroborates Niphadomimus monophyly; (B.) strongly argues for the sister-group relationship between N. merope sp. n. from the Qinling Mt. Range and the rest of the species distributed in the Hengduan mountains; (C.) in two among four analyses weakly relates the genus with the East Palaearctic Leiosoma. The tribe Typoderini could not be shown as monophyletic, which may be due to insufficient signal content of the cox1 marker at the tribal level. The detected phylogeographic pattern of Niphadomimus is compared with that of similarly distributed or closely related clades. Temporal DNA analysis estimates the N. merope sp. n. split at 6-11 MY, while the diversification of the Hengduan clade dates between 5.5 MY and 3.6 MY, i.e. well before the onset of the Quaternary climate fluctuations.

Ecological Factors Characterizing the Prevalence of Bacterial Tick-Borne Pathogens in Ixodes ricinus Ticks in Pastures and Woodlands ▿ §

PubMed Central

Halos, Lénaïg; Bord, Séverine; Cotté, Violaine; Gasqui, Patrick; Abrial, David; Barnouin, Jacques; Boulouis, Henri-Jean; Vayssier-Taussat, Muriel; Vourc'h, Gwenaël

2010-01-01

Ecological changes are recognized as an important driver behind the emergence of infectious diseases. The prevalence of infection in ticks depends upon ecological factors that are rarely taken into account simultaneously. Our objective was to investigate the influences of forest fragmentation, vegetation, adult tick hosts, and habitat on the infection prevalence of three tick-borne bacteria, Borrelia burgdorferi sensu lato, Anaplasma phagocytophilum, and Rickettsia sp. of the spotted fever group, in questing Ixodes ricinus ticks, taking into account tick characteristics. Samples of questing nymphs and adults were taken from 61 pastures and neighboring woodlands in central France. The ticks were tested by PCR of pools of nymphs and individual adults. The individual infection prevalence was modeled using multivariate regression. The highest infection prevalences were found in adult females collected in woodland sites for B. burgdorferi sensu lato and A. phagocytophilum (16.1% and 10.7%, respectively) and in pasture sites for Rickettsia sp. (8.7%). The infection prevalence in nymphs was lower than 6%. B. burgdorferi sensu lato was more prevalent in woodlands than in pastures. Forest fragmentation favored B. burgdorferi sensu lato and A. phagocytophilum prevalence in woodlands, and in pastures, the B. burgdorferi sensu lato prevalence was favored by shrubby vegetation. Both results are probably because large amounts of edges or shrubs increase the abundance of small vertebrates as reservoir hosts. The Rickettsia sp. prevalence was maximal on pasture with medium forest fragmentation. Female ticks were more infected by B. burgdorferi sensu lato than males and nymphs in woodland sites, which suggests an interaction between the ticks and the bacteria. This study confirms the complexity of the tick-borne pathogen ecology. The findings support the importance of small vertebrates as reservoir hosts and make a case for further studies in Europe on the link between the composition of the reservoir host community and the infection prevalence in ticks. PMID:20453131

Mountain Refugia Play a Role in Soil Arthropod Speciation on Madagascar: A Case Study of the Endemic Giant Fire-Millipede Genus Aphistogoniulus

PubMed Central

Wesener, Thomas; Raupach, Michael J.; Decker, Peter

2011-01-01

To elucidate the speciation mechanisms prevalent within hotspots of biodiversity, and the evolutionary processes behind the rise of their species-rich and endemic biota, we investigated the phylogeny of the giant fire-millipede genus Aphistogoniulus Silvestri, 1897, a Malagasy endemic. This study is the first comprehensive (molecular and morphological) phylogenetic study focusing on millipede (class Diplopoda) speciation on Madagascar. The morphological analysis is based on 35 morphological characters and incorporates ten described as well as two newly described species (A. rubrodorsalis n. sp. and A. jeekeli n. sp.) of Aphistogoniulus. The molecular analysis is based on both mitochondrial (COI and 16S), and nuclear genes (complete 18S rDNA), together comprised of 3031 base pairs, which were successfully sequenced for 31 individual specimens and eight species of Aphistogoniulus. In addition to the null-model (speciation by distance), two diversification models, mountain refugia and ecotone shift, were discovered to play a role in the speciation of soil arthropods on Madagascar. Mountain refugia were important in the speciation of the A. cowani clade, with three species occurring in the Andringitra and Ranomafana Mountains in the southeast (A. cowani), the Ambohijanahary and Ambohitantely Mountains in the mid-west (A. sanguineus), and the Marojejy Mountain in the northeast (A. rubrodorsalis n. sp.). An ecotone shift from the eastern rainforest to the unique subarid spiny forest of Mahavelo was discovered in the A. vampyrus - A. aridus species-pair. In the monophyletic A. diabolicus clade, evidence for divergent evolution of sexual morphology was detected: species with greatly enlarged gonopods are sister-taxa to species with normal sized gonopods. Among the large-bodied Spirobolida genera of Madagascar, Colossobolus and Sanguinobolus were found to be close sister-genera to Aphistogoniulus. Forest destruction has caused forest corridors between populations to disappear, which might limit the possible resolution of biogeographic analyses on Madagascar. PMID:22162998

Long-term deforestation in NW Spain: linking the Holocene fire history to vegetation change and human activities

NASA Astrophysics Data System (ADS)

Kaal, Joeri; Carrión Marco, Yolanda; Asouti, Eleni; Martín Seijo, Maria; Martínez Cortizas, Antonio; Costa Casáis, Manuela; Criado Boado, Felipe

2011-01-01

The Holocene fire regime is thought to have had a key role in deforestation and shrubland expansion in Galicia (NW Spain) but the contribution of past societies to vegetation burning remains poorly understood. This may be, in part, due to the fact that detailed fire records from areas in close proximity to archaeological sites are scarce. To fill this gap, we performed charcoal analysis in five colluvial soils from an archaeological area (Campo Lameiro) and compared the results to earlier studies from this area and palaeo-ecological literature from NW Spain. This analysis allowed for the reconstruction of the vegetation and fire dynamics in the area during the last ca 11 000 yrs. In the Early Holocene, Fabaceae and Betula sp. were dominant in the charcoal record. Quercus sp. started to replace these species around 10 000 cal BP, forming a deciduous forest that prevailed during the Holocene Thermal Maximum until ˜5500 cal BP. Following that, several cycles of potentially fire-induced forest regression with subsequent incomplete recovery eventually led to the formation of an open landscape dominated by shrubs (Erica sp. and Fabaceae). Major episodes of forest regression were (1) ˜5500-5000 cal BP, which marks the mid-Holocene cooling after the Holocene Thermal Maximum, but also the period during which agropastoral activities in NW Spain became widespread, and (2) ˜2000-1500 cal BP, which corresponds roughly to the end of the Roman Warm Period and the transition from the Roman to the Germanic period. The low degree of chronological precision, which is inherent in fire history reconstructions from colluvial soils, made it impossible to distinguish climatic from human-induced fires. Nonetheless, the abundance of synanthropic pollen indicators (e.g. Plantago lanceolata and Urtica dioica) since at least ˜6000 cal BP strongly suggests that humans used fire to generate and maintain pasture.

Nutritional comparison of Spirulina sp powder by solid-state fermentation using Aspergillus sp (FNCL 6088) and Lactobacillus plantarum (FNCL 0127)

NASA Astrophysics Data System (ADS)

Dewi, E. N.; Amalia, U.

2018-01-01

The Spirulina sp powder contains high levels of protein and Solid-State Fermentation (SSF) improved protein level. The aims of the study was to find the proximate contents in Spirulina sp’s powder fermentation. The experiments were conducted by SSF of Spirulina sp’s powder using fungi Aspergillus sp (FNCL 6088) and lactic acid bacteria Lactobacillus plantarum (FNCL 0127). SSF was carried out for 10 days at 35% moisture level. The protein contents of Spirulina sp’s powder fermented by L. plantarum were consistently lower (p < 0.05) about 43.28% than compare with the other one about 46.12% (SSF by Aspergillus sp) until the end of fermentation. The Spirulina sp fermented products contained the highest level of protein after 6 days.

Managing national forests of the eastern United States for non-timber forest products

Treesearch

James L. Chamberlain; Robert J. Bush; A.L. Hammett; Philip A. Araman

2000-01-01

Over the last decade, there has been a growing interest in the economic and ecological potential of non-timber forest products. In the United States, much of this increased interest stems from drastic changes in forest practices and policies in the Pacific Northwest region, a region that produces many non-timber forest products. The forests of the eastern United States...

36 CFR 271.8 - Consultation with Association of State Foresters and the Advertising Council.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false Consultation with Association of State Foresters and the Advertising Council. 271.8 Section 271.8 Parks, Forests, and Public... Association of State Foresters and the Advertising Council. These regulations in this part have been issued...

Executive Summary: Forests of the Northern United States

Treesearch

Stephen R. Shifley; Francisco X. Aguilar; Nianfu Song; Susan I. Stewart; David J. Nowak; Dale D. Gormanson; W. Keith Moser; Sherri Wormstead; Eric J. Greenfield

2012-01-01

This executive summary provides an overview of the 200-page report, Forests of the Northern United States, which covers in detail current forest conditions, recent trends, issues, threats and opportunities in the forests in the 20 Northern States. It provides a context for subsequent Northern Forest Futures Project analyses that will forecast alternative future...

Candida saraburiensis sp. nov. and Candida prachuapensis sp. nov., xylose-utilizing yeast species isolated in Thailand.

PubMed

Nitiyon, Sukanya; Boonmak, Chanita; Am-In, Somjit; Jindamorakot, Sasitorn; Kawasaki, Hiroko; Yongmanitchai, Wichien; Limtong, Savitree

2011-02-01

Four strains of two novel xylose-utilizing yeast species were obtained from samples collected in Thailand from decaying corncobs (strains KU-Xs13(T) and KU-Xs18), a decaying grass (KU-Xs20) and estuarine water from a mangrove forest (WB15(T)). On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics and sequence analysis of the D1/D2 domain of the large subunit rRNA gene, the four strains were found to represent two novel species of the genus Candida in the Candida albicans/Lodderomyces elongisporus clade. Three strains (KU-Xs13(T), KU-Xs18 and KU-Xs20) were assigned as a single novel species, which was named Candida saraburiensis sp. nov. The type strain is KU-Xs13(T) (=CBS 11696(T)=NBRC 106721(T)=BCC 39601(T)). Strain WB15(T) represented another novel species of the genus Candida that was named Candida prachuapensis sp. nov. The type strain is WB15(T) (=CBS 11024(T)=NBRC 104881(T)=BCC 29904(T)).

Descriptions of two new genera of the spider family Caponiidae (Arachnida, Araneae) and an update of Tisentnops and Taintnops from Brazil and Chile

PubMed Central

Brescovit, Antonio D.; Sánchez-Ruiz, Alexander

2016-01-01

Abstract New members of the spider family Caponiidae from Brazil and Chile are presented. Three new species in previously known genera are described: Taintnops paposo sp. n. from Chile, and the Brazilian Tisentnops mineiro sp. n. and Tisentnops onix sp. n., both belonging to a genus known only from its damaged type. Additionally, two new non–nopine Brazilian genera are proposed: Nasutonops gen. n. including three new species: Nasutonops chapeu sp. n., Nasutonops sincora sp. n. and Nasutonops xaxado sp. n.; and Carajas gen. n., known only from the type species Carajas paraua sp. n. Both new genera have entire, rather than sub-segmented tarsi. Therefore, they are not included in the caponiid subfamily Nopinae. Nasutonops gen. n. is characterized by the presence of a projected clypeal horn, unique among caponiids. Additionally, the first blind caponiids are described: Tisentnops mineiro sp. n. from the state of Minas Gerais and Carajas paraua sp. n. from the state of Pará. Both of these species are found only in caves and completely lack eyes. PMID:27843380

PERSPECTIVE VIEW OF THE NATIONAL REGISTERLISTED OREGON STATE FORESTER'S OFFICE ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

PERSPECTIVE VIEW OF THE NATIONAL REGISTER-LISTED OREGON STATE FORESTER'S OFFICE BUILDING AND STONEMASONRY WALL AND FLAGSTONE SIDEWALK ALONG STATE STREET, VIEW LOOKING SOUTH FROM STATE STREET. - Oregon State Forester's Office Complex, 2600 State Street, Salem, Marion, OR

Distribution of ectomycorrhizal and pathogenic fungi in soil along a vegetational change from Japanese black pine (Pinus thunbergii) to black locust (Robinia pseudoacacia).

PubMed

Taniguchi, Takeshi; Kataoka, Ryota; Tamai, Shigenobu; Yamanaka, Norikazu; Futai, Kazuyoshi

2009-04-01

The nitrogen-fixing tree black locust (Robinia pseudoacacia L.) seems to affect ectomycorrhizal (ECM) colonization and disease severity of Japanese black pine (Pinus thunbergii Parl.) seedlings. We examined the effect of black locust on the distribution of ECM and pathogenic fungi in soil. DNA was extracted from soil at depths of 0-5 and 5-10 cm, collected from the border between a Japanese black pine- and a black locust-dominated forest, and the distribution of these fungi was investigated by denaturing gradient gel electrophoresis. The effect of soil nutrition and pH on fungal distribution was also examined. Tomentella sp. 1 and Tomentella sp. 2 were not detected from some subplots in the Japanese black pine-dominated forest. Ectomycorrhizas formed by Tomentella spp. were dominant in black locust-dominated subplots and very little in the Japanese black pine-dominated forest. Therefore, the distribution may be influenced by the distribution of inoculum potential, although we could not detect significant relationships between the distribution of Tomentella spp. on pine seedlings and in soils. The other ECM fungi were detected in soils in subplots where the ECM fungi was not detected on pine seedlings, and there was no significant correlation between the distribution of the ECM fungi on pine seedlings and in soils. Therefore, inoculum potential seemed to not always influence the ECM community on roots. The distribution of Lactarius quieticolor and Tomentella sp. 2 in soil at a depth of 0-5 cm positively correlated with soil phosphate (soil P) and that of Tomentella sp. 2 also positively correlated with soil nitrogen (soil N). These results suggest the possibility that the distribution of inoculum potential of the ECM fungi was affected by soil N and soil P. Although the mortality of the pine seedlings was higher in the black locust-dominated area than in the Japanese black pine-dominated area, a pathogenic fungus of pine seedlings, Cylindrocladium pacificum, was detected in soil at depths of 0-5 and 5-10 cm from both these areas. This indicates that the disease severity of pine seedlings in this study was influenced by environmental conditions rather than the distribution of inoculum potential.

Candida kantuleensis sp. nov., a d-xylose-fermenting yeast species isolated from peat in a tropical peat swamp forest.

PubMed

Nitiyon, Sukanya; Khunnamwong, Pannida; Lertwattanasakul, Noppon; Limtong, Savitree

2018-05-24

Three strains (DMKU-XE11 T , DMKU-XE15 and DMKU-XE20) representing a single novel anamorphic and d-xylose-fermenting yeast species were obtained from three peat samples collected from Khan Thulee peat swamp forest in Surat Thani province, Thailand. The strains differed from each other by one to two nucleotide substitutions in the sequences of the D1/D2 region of the large subunit (LSU) rRNA gene and zero to one nucleotide substitution in the internal transcribed spacer (ITS) region. Phylogenetic analysis based on the combined sequences of the ITS and the D1/D2 regions showed that the three strains represented a single Candida species that was distinct from the other related species in the Lodderomyces/Candida albicans clade. The three strains form a subclade with the other Candida species including Candida sanyaensis, Candida tropicalis and Candida sojae. C. sanyaensis was the most closely related species, with 2.1-2.4 % nucleotide substitutions in the D1/D2 region of the LSU rRNA gene, and 3.8-4.0 % nucleotide substitutions in the ITS region. The three strains (DMKU-XE11 T , DMKU-XE15 and DMKU-XE20) were assigned as a single novel species, which was named Candida kantuleensis sp. nov. The type strain is DMKU-XE11 T (=CBS 15219 T =TBRC 7764 T ). The MycoBank number for C. kantuleensis sp. nov. is MB 824179.

Dining in the Pleistocene—Who's on the menu?

NASA Astrophysics Data System (ADS)

Kohn, Matthew J.; McKay, Moriah P.; Knight, James L.

2005-08-01

The Camelot local fauna, a new fossil locality in southeastern South Carolina, has yielded a spectacularly abundant and well-preserved late Irvingtonian (ca. 400 ka) megafauna, including saber-toothed cat (Smilodon fatalis), wolf (Canis armbrusteri), cheetah (Miracinonyx inexpectatus), “camels” (Hemiauchenia macrocephala and Paleolama mirifica), tapir (Tapirus veroensis), deer (Odocoileus virginianus), sloth (Megalonyx jeffersoni), and horse (Equus sp.). Of particular interest is the number of well-preserved fossil teeth and the ability to decipher paleoecologies and paleodiets, especially for carnivores, by using carbon isotope compositions (δ13C) of these teeth. P. mirifica, M. jeffersoni, O. virginianus, and T. veroensis have the lowest δ13C values (-16‰ to -13‰, Vienna Peedee belemnite standard); C. armbrusteri, S. fatalis, and H. macrocephala have intermediate values (-13‰ to -8‰); and Equus sp. has the highest values (-7‰ to -1‰). High (>-5‰) vs. low (≤-9‰) δ13C values for herbivores indicate local habitats dominated by warm-climate grasses vs. trees and shrubs. The high δ13C values for Equus sp. indicate the presence of grasslands, whereas the low δ13C values for the other herbivores generally indicate the presence of forests. Although few data are available for carnivores, moderate δ13C values for C. armbrusteri indicate that it preyed mainly upon forest herbivores. S. fatalis appears to have preferred marginal woodland-grassland areas.

Evidence that the Ceratobasidium-like white-thread blight and black rot fungal pathogens from persimmon and tea crops in the Brazilian Atlantic Forest agroecosystem are two distinct phylospecies

PubMed Central

Ceresini, Paulo C.; Costa-Souza, Elaine; Zala, Marcello; Furtado, Edson L.; Souza, Nilton L.

2012-01-01

The white-thread blight and black rot (WTBR) caused by basidiomycetous fungi of the genus Ceratobasidium is emerging as an important plant disease in Brazil, particularly for crop species in the Ericales such as persimmon (Diospyros kaki) and tea (Camellia sinensis). However, the species identity of the fungal pathogen associated with either of these hosts is still unclear. In this work, we used sequence variation in the internal transcribed spacer regions, including the 5.8S coding region of rDNA (ITS-5.8S rDNA), to determine the phylogenetic placement of the local white-thread-blight-associated populations of Ceratobasidium sp. from persimmon and tea, in relation to Ceratobasidium species already described world-wide. The two sister populations of Ceratobasidium sp. from persimmon and tea in the Brazilian Atlantic Forest agroecosystem most likely represent distinct species within Ceratobasidium and are also distinct from C. noxium, the etiological agent of the first description of white-thread blight disease that was reported on coffee in India. The intraspecific variation for the two Ceratobasidium sp. populations was also analyzed using three mitochondrial genes (ATP6, nad1 and nad2). As reported for other fungi, variation in nuclear and mitochondrial DNA was incongruent. Despite distinct variability in the ITS-rDNA region these two populations shared similar mitochondrial DNA haplotypes. PMID:22888299

AmeriFlux US-MMS Morgan Monroe State Forest

DOE Data Explorer

Philip, Rich [Indiana Univ., Bloomington, IN (United States); Novick, Kim [Indiana Univ., Bloomington, IN (United States)

2016-01-01

This is the AmeriFlux version of the carbon flux data for the site US-MMS Morgan Monroe State Forest. Site Description - Owned by the Indiana Department of Natural Resources (IDNR), the Morgan Monroe State Forest, the site's namesake, is operated thanks to the long-term agreement between Indiana University and IDNR. The first settlers cleared the surrounding ridges for farming, but were largely unsuccessful. The state of Indiana purchased the land in 1929, creating the Morgan Monroe State Forest. Many of the trees in the tower footprint are 60-80 years old, surviving selective logging that ended over the past 10 years. Today, the forest is a secondary successional broadleaf forest within the maple-beech to oak hickory transition zone of the eastern deciduous forest.

Urban forest health monitoring: large-scale assessments in the United States

Treesearch

Anne Buckelew Cumming; Daniel B. Twardus; David J. Nowak

2008-01-01

The U.S. Department of Agriculture, Forest Service (USFS), together with state partners, developed methods to monitor urban forest structure, function, and health at a large statewide scale. Pilot studies have been established in five states using protocols based on USFS Forest Inventory and Analysis and Forest Health Monitoring program data collection standards....

TOPOGRAPHIC VIEW OF THE STATE FORESTER'S COMPLEX, VIEW LOOKING SOUTHWEST ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

TOPOGRAPHIC VIEW OF THE STATE FORESTER'S COMPLEX, VIEW LOOKING SOUTHWEST FROM STATE STREET, WITH THE K.O.G BUILDING (KEEP OREGON GREEN) IN THE FOREGROUND. - Oregon State Forester's Office Complex, 2600 State Street, Salem, Marion, OR

A model of forest floor carbon mass for United States forest types

Treesearch

James E. Smith; Linda S. Heath

2002-01-01

Includes a large set of published values of forest floor mass and develop large-scale estimates of carbon mass according to region and forest type. Estimates of average forest floor carbon mass per hectare of forest applied to a 1997 summary forest inventory, sum to 4.5 Gt carbon stored in forests of the 48 contiguous United States.

A new species of Cangshanaltica Konstantinov et al., a moss-inhabiting flea beetle from Thailand (Coleoptera: Chrysomelidae: Galerucinae: Alticini)

USDA-ARS?s Scientific Manuscript database

The second known species of flea beetle genus Cangshanaltica Konstantinov et al. (C. siamensis sp. nov.) from Thailand is described and illustrated. The described species is associated with moss habitats in a mountain forest. A key to the two known species of Cangshanaltica is provided...

Applied genetic conservation of Hawaiian Acacia koa: an eco-regional approach

Treesearch

Nick Dudley; Tyler Jones; Robert James; Richard Sniezko; Jessica Wright; Christina Liang; Paul F. Gugger; Phil Cannon

2017-01-01

Koa (Acacia koa) is a valuable tree species economically, ecologically, and culturally in Hawaii. A vascular wilt disease of koa, caused by the fungal pathogen Fusarium oxysporum f. sp. koae (FOXY), causes high rates of mortality in field plantings and threatens native koa forests in Hawaii. Producing seeds with genetic resistance to FOXY is vital...

Macrozoque hoplandrioides (Coleoptera: Staphylinidae: Aleocharinae), a new genus and species of false Lomechusini from México.

PubMed

Santiago-Jiménez, Quiyari J

2016-02-11

Macrozoque hoplandrioides n. gen. and n. sp. (Coleoptera: Staphylinidae: Aleocharinae), is described based on specimens recently collected from the Chimalapas forest in Mexico. The systematic position of Macrozoque is discussed and is proviosionally placed in the false Lomechusini clade. A distribution map, keys and illustrations are provided.

Association of weather and nest-site structure with reproductive success in California spotted owls

Treesearch

Malcolm North; George Steger; Renee Denton; Gary Eberlein; Tom Munton; Ken Johnson

2000-01-01

Although the spotted owl (Strix occidentalis) has been intensively studied, factors influencing its reproduction are not well understood. We examined a 9-year demographic study of 51-86 pairs of the California spotted owl (S. o. occidentalis), weather conditions, and forest structure at nest sites in oak (Quercus sp.) woodland and...

Selection of RAPD markers for investigation of genetic population structure in fusiform rust fungus infecting loblolly pine

Treesearch

James H. Roberds; Thomas L. Kubisiak; Pauline C. Spaine; S.F. Covert; R.L. Doudrick

1997-01-01

research to determine patterns of genetic differentiation among and within field populations of Cronartium quercuum f. sp. fusiforme using RAPD markers is currently underway in the molecular genetics laboratory at the Southern Institute of Forest Genetics. Fungal tissue was collected as a drop of spermatia or scrapings of a...

Map of forest ownership in the conterminous United States. [Scale 1:7,500,000].

Treesearch

Mark D. Nelson; Greg C. Liknes; Brett J. Butler

2010-01-01

This map depicts the spatial distribution of forest land across the conterminous United States, in 2007, differentiated into public vs. private forest land, and the percentage of corporate ownership of private forest land. Notable differences between eastern and western United States are evident on the map. Over two-thirds of western forest land is publicly owned, the...

Forest carbon management in the United States: 1600-2100

Treesearch

Richard A. Birdsey; Kurt Pregitzer; Alan Lucier

2006-01-01

This paper reviews the effects of past forest management on carbon stocks in the United States, and the challenges for managing forest carbon resources in the 21st century. Forests in the United States were in approximate carbon balance with the atmosphere from 1600-1800. Utilization and land clearing caused a large pulse of forest carbon emissions during the 19th...

A revision of the new world species of Polytrichophora Cresson and Facitrichophora, new genus (Diptera, Ephydridae)

PubMed Central

Mathis, Wayne N.; Zatwarnicki, Tadeusz

2012-01-01

Abstract The New World species of Polytrichophora Cresson and Facitrichophora new genus, are revised. Fifteen new species are described (type locality in parenthesis): Facitrichophora atrella sp. n. (Costa Rica. Guanacaste: Murciélago [10°56.9'N, 85°42.5'W; sandy mud flats around mangrove inlet]), Facitrichophora carvalhorum sp. n. (Brazil. São Paulo: Praia Puruba [23°21'S, 44°55.6'W; beach]), Facitrichophora manza sp. n. (Trinidad and Tobago. Trinidad. St. Andrew: Lower Manzanilla (12 km S; 10°24.5'N, 61°01.5'W), bridge over Nariva River), Facitrichophora panama sp. n. (Panama. Darien: Garachine [8°04'N, 78°22'W]), Polytrichophora adarca sp. n. (Barbados. Christ Church: Graeme Hall Nature Sanctuary [13°04.2'N, 59°34.7'W; swamp]), Polytrichophora arnaudorum sp. n. (Mexico. Baja California. San Felipe [31°01.5'N, 114°50.4'W]), Polytrichophora barba sp. n. (Cuba. Sancti Spiritus: Topes de Collantes [21°54.4'N, 80°01.4'W, 670 m]), Polytrichophora flavella sp. n. (Peru. Madre de Dios: Rio Manu, Pakitza [11°56.6'S, 71°16.9'W; 250 m]), Polytrichophora marinoniorum sp. n. (Brazil. Paraná: Antonina [25°28.4'S, 48°40.9'W; mangal]), Polytrichophora rostra sp. n. (Peru. Madre de Dios: Rio Manu, Pakitza [11°56.6'S, 71°16.9'W; 250 m]), Polytrichophora sinuosa sp. n. (Trinidad and Tobago. Trinidad. St. Andrew: Lower Manzanilla [12 km S; 10°24'N, 61°02'W]), Polytrichophora mimbres sp. n. (United States. New Mexico. Grant: Mimbres River [New Mexico Highway 61 & Royal John Mine Road; 32°43.8'N, 107°52'W; 1665 m]), Polytrichophora salix sp. n. (United States. Alaska. Matanuska-Susitna: Willow Creek [61°46.1'N, 150°04.2'W; 50 m]), Polytrichophora sturtevantorum sp. n. (United States. Tennessee. Shelby: Meeman Shelby State Park [Mississippi River; 35°20.4'N, 90°2.1'W; 98 m]), Polytrichophora prolata sp. n. (Belize. Stann Creek: Cockscomb Basin Wildlife Sanctuary [16°45'N, 88°30'W]). All known New World species of both genera are described with an emphasis on structures of the male terminalia, which are fully illustrated. Detailed locality data and distribution maps for all species are provided. For perspective and to facilitate recognition, the tribe Discocerinini is diagnosed and a key to included genera is provided. PMID:23204912

Conservation systematics of the shield-backed trapdoor spiders of the nigrum-group (Mygalomorphae, Idiopidae, Idiosoma): integrative taxonomy reveals a diverse and threatened fauna from south-western Australia.

PubMed

Rix, Michael G; Huey, Joel A; Cooper, Steven J B; Austin, Andrew D; Harvey, Mark S

2018-01-01

The aganippine shield-backed trapdoor spiders of the monophyletic nigrum -group of Idiosoma Ausserer s. l. are revised, and 15 new species are described from Western Australia and the Eyre Peninsula of South Australia: I. arenaceum Rix & Harvey, sp. n. , I. corrugatum Rix & Harvey, sp. n. , I. clypeatum Rix & Harvey, sp. n. , I. dandaragan Rix & Harvey, sp. n. , I. formosum Rix & Harvey, sp. n. , I. gardneri Rix & Harvey, sp. n. , I. gutharuka Rix & Harvey, sp. n. , I. incomptum Rix & Harvey, sp. n. , I. intermedium Rix & Harvey, sp. n. , I. jarrah Rix & Harvey, sp. n. , I. kopejtkaorum Rix & Harvey, sp. n. , I. kwongan Rix & Harvey, sp. n. , I. mcclementsorum Rix & Harvey, sp. n. , I. mcnamarai Rix & Harvey, sp. n. , and I. schoknechtorum Rix & Harvey, sp. n. Two previously described species from south-western Western Australia, I. nigrum Main, 1952 and I. sigillatum (O. P.-Cambridge, 1870), are re-illustrated and re-diagnosed, and complementary molecular data for 14 species and seven genes are analysed with Bayesian methods. Members of the nigrum -group are of long-standing conservation significance, and I. nigrum is the only spider in Australia to be afforded threatened species status under both State and Commonwealth legislation. Two other species, I. formosum Rix & Harvey, sp. n. and I. kopejtkaorum Rix & Harvey, sp. n. , are also formally listed as Endangered under Western Australian State legislation. Here we significantly relimit I. nigrum to include only those populations from the central and central-western Wheatbelt bioregion, and further document the known diversity and conservation status of all known species.

Conservation systematics of the shield-backed trapdoor spiders of the nigrum-group (Mygalomorphae, Idiopidae, Idiosoma): integrative taxonomy reveals a diverse and threatened fauna from south-western Australia

PubMed Central

Rix, Michael G.; Huey, Joel A.; Cooper, Steven J.B.; Austin, Andrew D.; Harvey, Mark S.

2018-01-01

Abstract The aganippine shield-backed trapdoor spiders of the monophyletic nigrum-group of Idiosoma Ausserer s. l. are revised, and 15 new species are described from Western Australia and the Eyre Peninsula of South Australia: I. arenaceum Rix & Harvey, sp. n., I. corrugatum Rix & Harvey, sp. n., I. clypeatum Rix & Harvey, sp. n., I. dandaragan Rix & Harvey, sp. n., I. formosum Rix & Harvey, sp. n., I. gardneri Rix & Harvey, sp. n., I. gutharuka Rix & Harvey, sp. n., I. incomptum Rix & Harvey, sp. n., I. intermedium Rix & Harvey, sp. n., I. jarrah Rix & Harvey, sp. n., I. kopejtkaorum Rix & Harvey, sp. n., I. kwongan Rix & Harvey, sp. n., I. mcclementsorum Rix & Harvey, sp. n., I. mcnamarai Rix & Harvey, sp. n., and I. schoknechtorum Rix & Harvey, sp. n. Two previously described species from south-western Western Australia, I. nigrum Main, 1952 and I. sigillatum (O. P.-Cambridge, 1870), are re-illustrated and re-diagnosed, and complementary molecular data for 14 species and seven genes are analysed with Bayesian methods. Members of the nigrum-group are of long-standing conservation significance, and I. nigrum is the only spider in Australia to be afforded threatened species status under both State and Commonwealth legislation. Two other species, I. formosum Rix & Harvey, sp. n. and I. kopejtkaorum Rix & Harvey, sp. n., are also formally listed as Endangered under Western Australian State legislation. Here we significantly relimit I. nigrum to include only those populations from the central and central-western Wheatbelt bioregion, and further document the known diversity and conservation status of all known species. PMID:29773959

A new forest-dwelling Bent-toed Gecko (Squamata: Gekkonidae: Cyrtodactylus) from Doi Suthep, Chiang Mai Province, northern Thailand.

PubMed

Kunya, Kirati; Panmongkol, Aumporn; Pauwels, Olivier S G; Sumontha, Montri; Meewasana, Jiraporn; Bunkhwamdi, Woraphot; Dangsri, Siriwat

2014-06-03

We describe a new forest-dwelling Cyrtodactylus from Doi Suthep, Chiang Mai Province, northern Thailand. Cyrtodactylus doisuthep sp. nov. is characterized by a maximal known SVL of 90.5 mm; 19 or 20 longitudinal rows of dorsal tubercles; a continuous series of 34 or 35 enlarged femoro-precloacal scales, including six or seven pitted scales on each femur (male and females) separated by a diastema from six pitted (females) or pore-bearing (male) precloacal scales; no precloacal groove or depression; transversely enlarged subcaudal scales; and six or seven irregular thin beige dorsal bands between limb insertions. 

Austroboletus amazonicus sp. nov. and Fistulinella campinaranae var. scrobiculata, two commonly occurring boletes from a forest dominated by Pseudomonotes tropenbosii (Dipterocarpaceae) in Colombian Amazonia.

PubMed

da Marcela Vasco-Palacios, Aí; López-Quintero, Carlos; Franco-Molano, Ana Esperanza; Boekhout, Teun

2014-01-01

Two boletes that frequently form fruiting bodies in Pseudomonotes tropenbosii forests are described from Colombian Amazonia. One is a new species of Austroboletus here described as A. amazonicus and the other one is Fistulinella campinaranae var. scrobiculata Singer, which is a new record for Colombia. Macromorphological, micromorphological and habitat data for these species are provided as well as DNA sequence data of the internal transcribed spacer (ITS) regions and the D1/D2 domains of the large subunit (LSU) ribosomal DNA. © 2014 by The Mycological Society of America.

Keylimepie peckorum gen. n. and sp. n., (Hymenoptera, Braconidae) from southern Florida, U.S., the first known brachypterous member of the subfamily Microgastrinae.

PubMed

Fernandez-Triana, Jose; Boudreault, Caroline

2016-01-01

Keylimepie peckorum Fernandez-Triana, gen. n. and sp. n., are described from southern Florida, U.S. Females have the shortest wings (0.6-0.7 × body length) of any known microgastrine wasp. The genus can also be recognized on features of the head, propodeum and first three metasomal tergites. All specimens were collected in hammock forests of the Florida Keys and Everglades National Park, but their host caterpillar is unknown. Because its morphology is unique and it is the first new microgastrine genus discovered in North America since 1985, the potential for future conservation of the species is discussed.

A new species of salamander (Caudata: Plethodontidae, Bolitoglossa) from Sierra Nevada de Mérida, Venezuela.

PubMed

García-Gutiérrez, Javier; Escalona, Moisés; Mora, Andrés; Díaz De Pascual, Amelia; Fermin, Gustavo

2013-01-01

In this article, a new species of salamander of the genus Bolitoglossa (Eladinea) from the cloud forest near La Mucuy in Sierra Nevada de Mérida, Venezuelan Andes, is described. Bolitoglossa mucuyensis sp. nov. differs from all Venezuelan salamanders, except B. orestes, by a larger SVL/TL ratio, and from La Culata salamander B. orestes by a reduced webbing extension of the front and hind limbs. Additionally, B. mucuyensis sp. nov. and B. orestes diverge 3.12% in terms of the nucleotide sequence of the 16S rRNA gene, as previously reported, and in 8.1% for the cytb gene as shown in this study.

Alabama's forest products industry: performance and contribution to the State's economy, 1970 to 1980.

Treesearch

Wilbur R. Maki; Con H Schallau; Bennett B. Foster; Clair H. Redmond

1986-01-01

Employment and earnings in Alabama's forest products industry, like those of most Southern States, grew significantly between 1970 and 1980. The forest products industry accounted for a larger share of the State's economic base. in 1980 than in 1970. Of the 13 Southern States, only 5 had more forest products industry employment than Alabama. Moreover, during...

North Carolina's forest products industry: performance and contribution to the state's economy, 1970 to 1980.

Treesearch

Con H. Schallau; Wilbur R. Maki; Bennett B. Foster; Clair H. Redmond

1985-01-01

Employment and earnings in North Carolina's forest products industry, like those of most Southern States, grew significantly between 1970 and 1980. The forest products industry accounted for a larger share of the State's economic base in 1980 than in 1970. North Carolina had more forest products industry employment than any other State in the South. Moreover...

Georgia's forest products industry: performance and contribution to the state's economy, 1970 to 1980.

Treesearch

Wilbur R. Maki; Con H. Schallau; Bennett B. Foster; Clair H. Redmond

1985-01-01

Employment and earnings in Georgia's forest products industry, like those of most Southern States, grew significantly between 1970 and 1980. The forest products industry accounted for nearly the same share of the State's economic base in 1980 as in 1970. Moreover, during this period, the State increased its share of the Nation's forest products industry...

South Carolina's forest products industry: performance and contribution to the state's economy, 1970 to 1980.

Treesearch

Wilbur R. Maki; Con H. Schallau; Bennett B. Foster; Clair H. Redmond

1986-01-01

Employment and earnings in South Carolina's forest products industry, like those of most Southern States, grew significantly between 1970 and 1980. The forest products industry accounted for a larger share of the State's economic base in 1980 than in 1970. Moreover, during this period, the State increased its share of the Nation's forest products...

Pros and cons of continuous forest inventory: customer perspectives

Treesearch

Andrew J. R. Gillespie

2000-01-01

The USDA Forest Service has historically conducted forest inventory on a state-by-state cycle, producing relatively high precision snapshots of forest resources for a given state at 7- to 15-year intervals. We are now considering a change to a continuous inventory system where we would operate at reduced intensity simultaneously in all states every year. Advantages for...

George O. White State Park Forest Nursery - Licking, Missouri

Treesearch

Greg Hoss

2002-01-01

The George O. White State Forest Nursery is owned and operated by the Missouri Department of Conservation. Our agency is responsible for the management of the fish, forest, and wildlife resources of the state.This paper will address the George O. White State Forest Nursery. It will discuss where we are, a little of our history, and our growing...

Exploring the feasibility of smart phone microphone for measurement of acoustic voice parameters and voice pathology screening.

PubMed

Uloza, Virgilijus; Padervinskis, Evaldas; Vegiene, Aurelija; Pribuisiene, Ruta; Saferis, Viktoras; Vaiciukynas, Evaldas; Gelzinis, Adas; Verikas, Antanas

2015-11-01

The objective of this study is to evaluate the reliability of acoustic voice parameters obtained using smart phone (SP) microphones and investigate the utility of use of SP voice recordings for voice screening. Voice samples of sustained vowel/a/obtained from 118 subjects (34 normal and 84 pathological voices) were recorded simultaneously through two microphones: oral AKG Perception 220 microphone and SP Samsung Galaxy Note3 microphone. Acoustic voice signal data were measured for fundamental frequency, jitter and shimmer, normalized noise energy (NNE), signal to noise ratio and harmonic to noise ratio using Dr. Speech software. Discriminant analysis-based Correct Classification Rate (CCR) and Random Forest Classifier (RFC) based Equal Error Rate (EER) were used to evaluate the feasibility of acoustic voice parameters classifying normal and pathological voice classes. Lithuanian version of Glottal Function Index (LT_GFI) questionnaire was utilized for self-assessment of the severity of voice disorder. The correlations of acoustic voice parameters obtained with two types of microphones were statistically significant and strong (r = 0.73-1.0) for the entire measurements. When classifying into normal/pathological voice classes, the Oral-NNE revealed the CCR of 73.7% and the pair of SP-NNE and SP-shimmer parameters revealed CCR of 79.5%. However, fusion of the results obtained from SP voice recordings and GFI data provided the CCR of 84.60% and RFC revealed the EER of 7.9%, respectively. In conclusion, measurements of acoustic voice parameters using SP microphone were shown to be reliable in clinical settings demonstrating high CCR and low EER when distinguishing normal and pathological voice classes, and validated the suitability of the SP microphone signal for the task of automatic voice analysis and screening.

Use of stock to maintain and construct trails in the eastern United States

Treesearch

Eric Sandeno

2007-01-01

Trail construction and reconstruction utilizing stock is rare in the eastern United States. The Hoosier National Forest is the only forest in the Eastern Region of the Forest Service with its own pack string. The Hoosier is also the only forest in the eastern United States to utilize pack strings from western forests to complete trail work within wilderness. For the...

Forest resource statistics for the Monongahela National Forest: 2000

Treesearch

Richard H. Widmann; Douglas M. Griffith

2004-01-01

During 1999-2000, the fifth inventory of West Virginia?s forest resources was conducted by the Forest Inventory and Analysis unit of the USDA Forest Service?s Northeastern Research Station. The survey included a subsample within the Monongahela National Forest (MNF). The results showed that the MNF contains 899,000 acres of forest land, or 7.5 percent of the State?s...

Proceedings of the Southern States Recreation Research Applications Workshop

Treesearch

H. Ken Cordell; J.W. Rawls; G.M. Broili; [Compilers

1976-01-01

North Carolina State University; the Forest Environment Research Division, USDA Forest Service; and the Southeastern Forest Experiment Station, USDA Forest Service sponsored this regional Workshop for recreation managers and planners in the Southern States. The objectives of the Workshop were to provide for interaction among recreation scientists, extension...

Carnivorous diving beetles of the genus Desmopachria (Coleoptera: Dytiscidae) from Brazil: New species, new records, and a checklist

PubMed Central

Braga, Rafael Benzi; Ferreira, Nelson

2014-01-01

Abstract Eight new species of DesmopachriaBabington, 1841 are described and illustrated from Brazil: D. dicrophallica sp. nov. , D. disticta sp. nov. , D. grammosticta sp. nov. , D . grandinigra sp. nov. , D. itamontensis sp. nov. , D. leptophallica sp. nov. , D. stethothrix sp. nov. , and D. ukuki sp. nov. The species D. amyaeMiller, 2001 , D. cheiMiller, 1999 , D. margarita Young, 1990, and D. volatidiscaMiller, 2001 are recorded for the first time from Brazil. From species of the Desmopachria reported in Brazil, D. aldessaYoung, 1980 has a new record from Pará state and D. fossulataZimmermann, 1928, D. granoidesYoung, 1986 , and D. laevis Sharp, 1882 have new records from Rio de Janeiro State. A checklist of all Desmopachria recorded from Brazil is presented with notes about some of the localities. Resumo Oito espécies novas de DesmopachriaBabington, 1841 são descritas e ilustradas para o Brasil, D. dicrophallica sp. nov. , D. disticta sp. nov. , D. grammosticta sp. nov. , D . grandinigra sp. nov., D. itamontensis sp. nov., D. leptophallica sp. nov., D. stethothrix sp. nov. e D. ukuki sp. nov. As espécies D. amyaeMiller, 2001, D. cheiMiller, 1999 , D. margarita Young, 1990 e D. volatidiscaMiller, 2001 são registradas pela primeira vez para o Brasil. Das espécies de Desmopachria registradas para o Brasil D. aldessaYoung, 1980 tem um novo registro para o estado do Pará e D. fossulataZimmermann, 1928 , D. granoidesYoung, 1986 e D. laevis Sharp, 1882 têm novos registros para o estado do Rio de Janeiro. Uma listagem de todos os Desmopachria registrados para o Brasil é apresentada, com notas acerca de algumas localidades. PMID:25373202

Structure of the low-lying positive parity states in the proton-neutron symplectic model

NASA Astrophysics Data System (ADS)

Ganev, H. G.

2018-05-01

The proton-neutron symplectic model with Sp(12, R) dynamical symmetry is applied for the simultaneous description of the microscopic structure of the low-lying states of the ground state, γ and β bands in 166 Er. For this purpose, the model Hamiltonian is diagonalized in the space of stretched states by exploiting the SUp (3) ⊗ SUn (3) symmetry-adapted basis. The theoretical predictions are compared with experiment and some other microscopic collective models, like the one-component Sp(6, R) symplectic and pseudo-SU(3) models. A good description of the energy levels of the three bands under consideration, as well as the enhanced intraband B(E2) transition strengths between the states of the ground and γ bands is obtained without the use of effective charges. The results show the presence of a good SU(3) dynamical symmetry. It is also shown that, in contrast to the Sp(6, R) case, the lowest excited bands, e.g., the β and γ bands, naturally appear together with the ground state band within a single Sp(12, R) irreducible representation.

Employment-generating projects for the energy and minerals sectors of Honduras. Proyectos generadores de empleos para los sectores energetico y minero de Honduras (in EN;SP)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Frank, J.A.

A mission to Honduras invited by the Government of Honduras and sponsored by the Organization of American States addressed the generation of employment in various areas of interest to the country. The mission was made up of experts from numerous countries and international agencies. In the energy sector, the mission recommended consolidating the sector under a coordinating body; carrying out projects to promote reforestation, tree farms, and rational forest utilization; encouraging industrial energy conservation; developing alternative energy sources; and promoting rural electrification and expansion of the electrical grid. In the mining sector, the mission supported promotion and technical assistance formore » small gold-leaching and placer operations, the national mineral inventory, detailed exploration of promising sites, and the development of a mining school. 13 refs., 7 tabs.« less

Family Forest Owners of the United States, 2006

Treesearch

Brett J. Butler

2008-01-01

This report summarizes results from the U.S. Forest Service's National Woodland Owner Survey of the estimated 10 million family forest owners who own 264 million acres (35 percent) of forest land in the United States. We collected information between 2002 and 2006 on family forest owners' forest holding characteristics, ownership histories, ownership...

Development of a stand-scale forest biodiversity index based on the state forest inventory

Treesearch

Diego Van Den Meersschaut; Kris Vandekerkhove

2000-01-01

Ecological aspects are increasingly influencing silvicultural management. Estimating forest biodiversity has become one often major tools for evaluating management strategies. A stand-scale forest biodiversity index is developed, based on available data from the state forest inventory. The index combines aspects of forest structure, woody and herbal layer composition,...

Timber products production in West Virginia 1965

Treesearch

Neal P. Kingsley; David R. Dickson

1968-01-01

This study was funded through the Appalachian Regional Development Act of 1965 and was conducted by the Forest Survey Project of the Northeastern Forest Experiment Station with the assistance of the State Forester and the Extension Forester of West Virginia, and the Monongahela Power Company. The State Forester's office and the Extension Forester provided lists of...

Neoplasta Coquillett (Diptera: Empididae: Hemerodromiinae) from Brazil:
new species and male description of N. fortiseta Smith.

PubMed

Câmara, Josenir T; Rafael, José A

2016-02-25

Neoplasta Coquillett is distributed in the New World. The male of N. fortiseta Smith and five new species collected in the Brazilian states of Santa Catarina and São Paulo (N. lobata sp. nov., N. longicornis sp. nov., N. macdonaldi sp. nov., N. nigrithorax sp. nov., and N. spinulosa sp. nov.), are described and illustrated. A key to Brazilian species is provided.

New species of Drymopsalta Heath Cicadas (Cicadidae: Cicadettinae: Cicadettini) from Queensland and Northern Territory, Australia, with overview of genus.

PubMed

Ewart, A; Popple, L W

2013-01-01

Three new species are described in the genus Drymopsalta Ewart, previously known only from D. crepitum Ewart and D. daemeli Distant. The three new species occur in Southern Queensland and Northern Territory. D. wallumi sp. nov. occurs along coastal S.E. Queensland, whereas D. hobsoni sp. nov. is restricted to the Bringalily State Forest, near Inglewood, southern inland Queensland. D. acrotela sp. nov. is found in the Litchfield National Park and other locations near Jabaluka, Cahills Crossing, E. Alligator River and Nourlangie, all across the northern Northern Territory. D. crepitum occurs on the Cape York Peninsular extending into the southern Gulf, while D. daemeli occurs in two localised regions in central coastal N.S.W. Each of the species inhabits heath vegetation, often spilling-over into adjacent tree foliage. The species of Drymopsalta are small and inconspicuous cicadas (< 15 mm body length) with relatively high frequency songs (~15 to 22 kHz). The temporal structures of the normal calling songs follow a similar pattern in each species, consisting of the emission of short chirps (comprising 2-16 ticks). Between the chirps are emitted one (D. wallumi, D. hobsoni, D. acrotela), two (D. daemeli) or 1-9 (D. crepitum) intervening single ticks. The species can be distinguished by the timing and the number of these single ticks relative to the adjacent chirps with the notable exception of D. hobsoni and D. acrotela. The calling songs of these two allopatric species are indistinguishable, an unusual feature in Australian cicadas. Two additional song variants are described, a more unstructured chirping song without intervening single ticks observed in each of the species except D. crepitum, and periodic extended buzzing echemes emitted within the calling songs (excepting the D. wallumi song).

Epidemiology of Rickettsia sp. strain Atlantic rainforest in a spotted fever-endemic area of southern Brazil.

PubMed

Barbieri, Amalia R M; Filho, Jonas M; Nieri-Bastos, Fernanda A; Souza, Julio C; Szabó, Matias P J; Labruna, Marcelo B

2014-10-01

The present study was performed in Vila Itoupava, an area of the state of Santa Catarina, southern Brazil, in which a tick-borne spotted fever illness has been endemic since 2003. Notably, both the etiological agent and the vector of these spotted fever cases remain unknown. During January 2011, humans, domestic dogs, and their ticks were sampled in households that are typically surrounded by highly preserved Atlantic rainforest fragments. Ticks collected from dogs were Amblyomma ovale (34% prevalence), Amblyomma aureolatum (18.9%), and Rhipicephalus sanguineus (3.8%). A total of 7.8% (6/77) A. ovale and 9.3% (4/43) A. aureolatum were infected by Rickettsia sp. strain Atlantic rainforest, a Rickettsia parkeri-like agent recently shown to cause spotted fever illness in southeastern Brazil. Overall, 67.3% (35/52) of the dogs were seroreactive to spotted fever group rickettsiae, mostly with highest endpoint titers to R. parkeri. Among humans, 46.7% (7/15) reacted serologically to rickettsiae at low to moderate endpoint titers. Because canine seroreactivity to R. parkeri was strongly associated with frequent contact with forests (the preferred habitat for A. ovale and A. aureolatum), it is concluded that sampled dogs have been infected by strain Atlantic rainforest through the parasitism of these tick species. The present study provides epidemiological evidence that the spotted fever in the study area has been caused by Rickettsia sp. strain Atlantic rainforest, transmitted to humans by either A. ovale or A. aureolatum. Further studies encompassing direct diagnostic methods on clinical specimens from patients are needed to confirm the above epidemiological evidence. Copyright © 2014 Elsevier GmbH. All rights reserved.

Three new species of the spider genus Plato and the new genus Cuacuba from caves of the states of Pará and Minas Gerais, Brazil (Araneae, Theridiosomatidae)

PubMed Central

Prete, Pedro H.; Cizauskas, Igor; Brescovit, Antonio D.

2018-01-01

Abstract Three new species of the genus Plato from caves in the states of Pará and Minas Gerais, Brazil, are described. P. novalima sp. n., from Minas Gerais, is the first record of the genus in the southeastern region of Brazil. P. ferriferus sp. n. and P. striatus sp. n., from Carajás, Pará, north of Brazil, are also described. The former is an extremely abundant species, whereas the latter has only one known male specimen. Cuacuba gen. n. is proposed and represented by two new species, C. mariana sp. n. (type species) and C. morrodopilar sp. n., both from the state of Minas Gerais. Morphology of genitalia in Cuacuba gen. n. is similar to other Theridiosomatidae genera and is herein discussed. None of the proposed species presents troglomorphic adaptations. They are widespread, abundant inside caves in different and large karst areas, and each genus prefers different lithologies. PMID:29736139

Three new species of the spider genus Plato and the new genus Cuacuba from caves of the states of Pará and Minas Gerais, Brazil (Araneae, Theridiosomatidae).

PubMed

Prete, Pedro H; Cizauskas, Igor; Brescovit, Antonio D

2018-01-01

Three new species of the genus Plato from caves in the states of Pará and Minas Gerais, Brazil, are described. P. novalima sp. n. , from Minas Gerais, is the first record of the genus in the southeastern region of Brazil. P. ferriferus sp. n. and P. striatus sp. n. , from Carajás, Pará, north of Brazil, are also described. The former is an extremely abundant species, whereas the latter has only one known male specimen. Cuacuba gen. n. is proposed and represented by two new species, C. mariana sp. n. (type species) and C. morrodopilar sp. n. , both from the state of Minas Gerais. Morphology of genitalia in Cuacuba gen. n. is similar to other Theridiosomatidae genera and is herein discussed. None of the proposed species presents troglomorphic adaptations. They are widespread, abundant inside caves in different and large karst areas, and each genus prefers different lithologies.

Three new species of Macrelmis Motschulsky (Coleoptera: Elmidae: Elminae) from Southeastern Brazil with new definition of species groups to the genus.

PubMed

Dos Passos, Maria Inês Silva; De Miranda, Gustavo Silva; Nessimian, Jorge Luiz

2015-12-16

Three new species of Macrelmis Motschulsky, 1859 are described and illustrated based on adult males from Rio de Janeiro, Minas Gerais and São Paulo states (southeastern Brazil). A new species groups definition is proposed for the genus, with a redefinition of the former six (aristeae sp. group, celsa sp. group, isus sp. group, granigera sp. group, milleri sp. group and striata sp. group) and designation of four new groups (alea new sp. group, amazonica new sp. group, grandis new sp. group and jureceki new sp. group). The male genitalia of M. clypeata is illustrated for the first time and distributional maps for all species of the genus are provided.

Fragmentation of Forest Communities in the Eastern United States

EPA Science Inventory

Forest fragmentation threatens the sustainability of forest communities and therefore the beta diversity of forestland in the eastern United States. We combined forest inventory data with land cover data to compare 70 forest communities in terms of the amount and ownership of int...

The national forest inventory of the United States of America

Treesearch

Ronald E. McRoberts

2008-01-01

The mission of the Forest Inventory and Analysis (FIA) program of the Forest Service, U.S. Department of Agriculture, is to conduct the national forest inventory of the United States of America for purposes of estimating the area of forest land; the volume, growth, and removal of forest resources; and the health of the forest. Users of FIA data, estimates, and related...

California's forest resources. Preliminary assessment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1979-01-01

This Preliminary Assessment was prepared in response to the California Forest Resources Assessment and Policy Act of 1977 (FRAPA). This Act was passed to improve the information base upon which State resource administrators formulate forest policy. The Act provides for this report and a full assessment by 1987 and at five year intervals thereafter. Information is presented under the following chapter titles: introduction to the forest resources assessment program; the forest area: a general description; classifications of the forest lands; the watersheds; forest lands and the air resource; fish and wildlife resources; the forested rangelands; the wilderness; forest lands asmore » a recreation resource; the timber resource; wood energy; forest lands and the mineral, fossil fuels, and geothermal energy resources; mathematically modeling California's forest lands; vegetation mapping using remote sensing technology; important forest resources legislation; and, State and cooperative State/Federal forestry programs. Twelve indexes, a bibliography, and glossary are included. (JGB)« less

Trends in Maryland's Forests

Treesearch

Richard H. Widmann

2002-01-01

Forests protect watersheds, provide opportunities for recreation and settings for aesthetic enjoyment, serve as habitat for wildlife, and produce wood and other forest products. The forests of Maryland contribute greatly to the quality of life of the State?s residents, making the Old Line State a better place in which to live. Data in this brochure are from reports...

The Granite State's Forests: Trends in the Resource

Treesearch

Northeastern Research Station

2002-01-01

The USDA Forest Service conducts continuing forest inventories of all states to obtain up-to-date information about the forest resources of the Nation. In 1997, the Forest Service in cooperation with the New Hampshire Division of Forests and Lands completed a new inventory of New Hampshire. Previous inventories were conducted in 1948, 1960, 1973, and 1983. Following...

Nontimber forest products management on national forests in the United States.

Treesearch

Rebecca J. McLain; Eric T. Jones

2005-01-01

This study provides an overview of nontimber forest products (NTFP) programs on national forests in the United States. We conducted an email survey in 2003 to obtain data on NTFP management activities on national forests across the country. Program characteristics examined in the study included important NTFPs managed on national forests, presence of NTFP coordinators...

Putting science into action on Forest Service Lands [Chapter 5

Treesearch

William M. Block; Victoria A. Saab; Leonard Ruggiero

2012-01-01

The U.S. Forest Service includes three main branches: National Forest Systems, Research and Development, and State and Private Forestry. Herein, we focus on National Forest Systems and Research and Development. National Forest Systems is the management branch of the agency, and its charge is to administer national forests and grasslands throughout the United States. A...

Streptomyces rhizosphaerihabitans sp. nov. and Streptomyces adustus sp. nov., isolated from bamboo forest soil.

PubMed

Lee, Hyo-Jin; Whang, Kyung-Sook

2016-09-01

Three novel isolates belonging to the genus Streptomyces, designated JR-35T, JR-46 and WH-9T, were isolated from bamboo forest soil in Damyang, Korea. The 16S rRNA gene sequences of strains JR-35T and JR-46 showed highest similarities with Streptomyces olivochromogenes NBRC 3178T (99.1 %), Streptomyces siamensis KC-038T (98.9 %), Streptomyces chartreusis NBRC 12753T (98.9 %), Streptomyces resistomycificus NRRL ISP-5133T (98.9 %) and Streptomyces bobili JCM 4627T (98.8 %), and strain WH-9Tshowed highest sequence similarities with Streptomyces. bobili JCM 4627T (99.2 %), Streptomyces phaeoluteigriseus NRRL ISP-5182T (99.2 %), Streptomyces alboniger NBRC 12738T (99.2 %), Streptomyces galilaeus JCM 4757T (99.1 %) and Streptomyces pseudovenezuelae NBRC 12904T (99.1 %). The predominant menaquinones were MK-9 (H6) and MK-9 (H8). The major fatty acids were anteiso-C15 : 0, iso-C16 : 0, iso-C14 : 0 and iso-C15 : 0 for strains JR-35T and JR-46 and anteiso-C15 : 0, iso-C15 : 0 and iso-C16 : 0 for strain WH-9T. The G+C content of the genomic DNA of strains JR-35T, JR-46 and WH-9T were 69.4, 74.4 and 74.1 mol%, respectively. Based on the phenotypic and genotypic data, the three strains are assigned to two novel species of the genus Streptomyces, for which the names Streptomyces rhizosphaerihabitans sp. nov. (type stain JR-35T=KACC 17181T=NBRC 109807T) and Streptomyces adustus sp. nov. (type strain WH-9T=KACC 17197T=NBRC 109810T) are proposed.

78 FR 25134 - Termination of the Preparation of an Air Tour Management Plan and Environmental Assessment for...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-29

... Forest National Park in Arizona. The FAA and NPS have stopped work on preparation of the ATMP and EA... Lusk, Program Manager, AWP-1SP, Federal Aviation Administration, Western-Pacific Region, P.O. Box 92007... developed. The FAA and NPS began preparing an EA to comply with the National Environmental Policy Act (Pub...

Manuka oil and phoebe oil are attractive baits for xyleborus glabratus (coleoptera: scolytinae), the vector of Laurel Wilt

Treesearch

James L. Hanula; Brian Sullivan

2008-01-01

Redbay ambrosia beetle, Xyleborus glabratus Eichhoff, is a native of Southeast Asia recently established in coastal forests of Georgia, SC and Florida It vectors a wilt fungus, Raffaeka sp., lethal to redbay trees, Persea borbonia L. Spreng, and certain other Lauraceae. No practical monitoring system exists for this beetle so we...

The complete genome sequence of a third distinct baculovirus isolated from the true armyworm, Mythimna unipuncta, contains two copies of the lef-7 gene

USDA-ARS?s Scientific Manuscript database

A baculovirus isolate from a USDA Forest Service collection was examined by electron microscopy and analysis of its genome sequence. The isolate, formerly referred to as Pseudoletia (Mythimna) sp. nucleopolyhedrovirus #7 (MyspNPV#7), was determined by barcoding PCR to derive from the host species My...

Tardigrada from a sub-Andean forest in the Sierra Nevada de Santa Marta (Colombia) with the description of Itaquascon pilatoi sp. nov.

PubMed

Lisi, Oscar; Londoño, Rosana; Quiroga, Sigmer

2014-07-29

Currently only 32 species of limno-terrestrial tardigrades have been reported in the literature for Colombia. Our study focused on both heterotardigrades and eutardigrades, which were extracted from eight samples of bryophytes and lichens collected in a sub-Andean forest transect in the Sierra Nevada de Santa Marta, Colombia. Fourteen species were found, six of which are new records for Colombia: Echiniscus madonnae Michalczyk & Kaczmarek, 2006, Echiniscus virginicus Riggin, 1962, Milnesium krzysztofi Kaczmarek & Michalczyk, 2007, Doryphoribius amazzonicus Lisi, 2011, Isohypsibius sattleri (Richters, 1902) and Diphascon higginsi Binda, 1971; and one new to science. Itaquascon pilatoi sp. nov., is characterized by having smooth cuticle, no eyes, buccal tube almost as long as the pharyngeal tube, well developed, obvious stylet furcae with long branches, slender claws, no lunules and no cuticular bars on the legs. The new species differs from I. umbellinae Barros, 1939, the most similar species, in having the stylet supports inserted precisely at the border between buccal and pharyngeal tube, more slender claws and more pronounced length differential between the external and internal claws of each leg. The total number of Colombian limno-terrestrial tardigrade species is raised to 37. 

Streptomyces solisilvae sp. nov., isolated from tropical forest soil.

PubMed

Zhou, Shuangqing; Yang, Xiaobo; Huang, Dongyi; Huang, Xiaolong

2017-09-01

A novel streptomycete (strain HNM0141T) was isolated from tropical forest soil collected from Bawangling mountain of Hainan island, PR China and its taxonomic position was established in a polyphasic study. The organism had chemical and morphological properties consistent with its classification as a member of the Streptomyces violaceusnigerclade. On the basis of the results of 16S rRNA gene sequence analysis, HNM0141T showed highest similarity to Streptomyces malaysiensisCGMCC4.1900T (99.4 %), Streptomyces samsunensis DSM 42010T (98.9 %), Streptomyces yatensis NBRC 101000T (98.3 %), Streptomyces rhizosphaericus NBRC 100778T (98.0 %) and Streptomyces sporoclivatus NBRC 100767T (97.9 %). The strain formed a well-delineated subclade with S. malaysiensis CGMCC4.1900T and S. samsunensis DSM 42010T. The levels of DNA-DNA relatedness between HNM0141T and S. malaysiensis CGMCC4.1900T and S. samsunensis DSM 42010T were 62 and 44 %, respectively. On the basis of phenotypic and genotypic characteristics, HNM0141T represents a novel species in the S. violaceusnigerclade for which the name Streptomyces solisilvae sp. nov. is proposed. The type strain is HNM0141 T (=CCTCC AA 2016045T=KCTC 39905T).

Microhabitat of small mammals at ground and understorey levels in a deciduous, southern Atlantic forest.

PubMed

Melo, Geruza L; Miotto, Barbara; Peres, Brisa; Cáceres, Nilton C

2013-01-01

Each animal species selects specific microhabitats for protection, foraging, or micro-climate. To understand the distribution patterns of small mammals on the ground and in the understorey, we investigated the use of microhabitats by small mammals in a deciduous forest of southern Brazil. Ten trap stations with seven capture points were used to sample the following microhabitats: liana, fallen log, ground litter, terrestrial ferns, simple-trunk tree, forked tree, and Piper sp. shrubs. Seven field phases were conducted, each for eight consecutive days, from September 2006 through January 2008. Four species of rodents (Akodon montensis, Sooretamys angouya, Oligoryzomys nigripes and Mus musculus) and two species of marsupials (Didelphis albiventris and Gracilinanus microtarsus) were captured. Captured species presented significant differences on their microhabitat use (ANOVA, p = 0.003), particularly between ground and understorey sites. Akodon montensis selected positively terrestrial ferns and trunks, S. angouya selected lianas, D. albiventris selected fallen trunks and Piper sp., and G. microtarsus choose tree trunks and lianas. We demonstrated that the local small-mammal assemblage does select microhabitats, with different types of associations between species and habitats. Besides, there is a strong evidence of habitat selection in order to diminish predation.

Coexisting bacterial populations responsible for multiphasic mineralization kinetics in soil. [Janthinobacterium sp. Rhodococcus sp

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmidt, S.K.; Gier, M.J.

1990-09-01

Experiments were conducted to study populations of indigenous microorganisms capable of mineralizing 2,4-dinitrophenol (DNP) in two soils. Previous kinetic analyses indicated the presence of two coexisting populations of DNP-mineralizing microorganisms in a forest soil (soil 1). Studies in which eucaryotic and procaryotic inhibitors were added to this soil indicated that both populations were bacterial. Most-probable-number counts with media containing different concentrations of DNP indicated that more bacteria could mineralize low concentrations of DNP than could metabolize high concentrations of it. Enrichments with varying concentrations of DNP and various combinations of inhibitors consistently resulted in the isolation of the same twomore » species of bacteria from soil 1. This soil contained a large number and variety of fungi, but no fungi capable of mineralizing DNP were isolated. The two bacterial isolates were identified as a Janthinobacterium sp. and a Rhodococcus sp. The Janthinobacterium sp. had a low {mu}{sub max} and a low K{sub m} for DNP mineralization, whereas the Rhodococcus sp. had much higher values for both parameters. These differences between the two species of bacteria were similar to differences seen when soil was incubated with different concentrations of DNP. Values for {mu}{sub max} from soil incubations were similar to {mu}{sub max} values obtained in pure culture studies. In contrast, K{sub s} and K{sub m} values showed greater variation between soil and pure culture studies.« less

Classification and evaluation for forest sites on the Natchez Trace State Forest, State Resort Park, and Wildlife Management Area in West Tennessee

Treesearch

Glendon W. Smalley

1991-01-01

Presents comprehensive forest site classification system for the 45,084-acre Natchez Trace State Forest, State Resort park, and WIldlife Management Area in the highly dissected and predominantly hilly Upper Coastal Plain of west Tennessee. Twenty-five landtypes are identified. Each landtype is defined in terms of nine elements and evaluated on the baiss of...

Estimation and modeling of forest attributes across large spatial scales using BiomeBGC, high-resolution imagery, LiDAR data, and inventory data

NASA Astrophysics Data System (ADS)

Golinkoff, Jordan Seth

The accurate estimation of forest attributes at many different spatial scales is a critical problem. Forest landowners may be interested in estimating timber volume, forest biomass, and forest structure to determine their forest's condition and value. Counties and states may be interested to learn about their forests to develop sustainable management plans and policies related to forests, wildlife, and climate change. Countries and consortiums of countries need information about their forests to set global and national targets to deal with issues of climate change and deforestation as well as to set national targets and understand the state of their forest at a given point in time. This dissertation approaches these questions from two perspectives. The first perspective uses the process model Biome-BGC paired with inventory and remote sensing data to make inferences about a current forest state given known climate and site variables. Using a model of this type, future climate data can be used to make predictions about future forest states as well. An example of this work applied to a forest in northern California is presented. The second perspective of estimating forest attributes uses high resolution aerial imagery paired with light detection and ranging (LiDAR) remote sensing data to develop statistical estimates of forest structure. Two approaches within this perspective are presented: a pixel based approach and an object based approach. Both approaches can serve as the platform on which models (either empirical growth and yield models or process models) can be run to generate inferences about future forest state and current forest biogeochemical cycling.

Estimating forest biomass and identifying low-intensity logging areas using airborne scanning lidar in Antimary State Forest, Acre State, Western Brazilian Amazon

Treesearch

Marcus V.N. d' Oliveira; Stephen E. Reutebuch; Robert J. McGaughey; Hans-Erik. Andersen

2012-01-01

The objectives of this study were to estimate above ground forest biomass and identify areas disturbed by selective logging in a 1000 ha Brazilian tropical forest in the Antimary State Forest using airborne lidar data. The study area consisted of three management units, two of which were unlogged, while the third unit was selectively logged at a low intensity. A...

Site productivity and forest carbon stocks in the United States: Analysis and implications for forest offset project planning

Treesearch

Coeli M. Hoover; James E. Smith

2012-01-01

The documented role of United States forests in sequestering carbon, the relatively low cost of forest-based mitigation, and the many co-benefits of increasing forest carbon stocks all contribute to the ongoing trend in the establishment of forest-based carbon offset projects. We present a broad analysis of forest inventory data using site quality indicators to provide...

Effects of increasing forest plantation area and management practices on carbon storage and water use in the United States

NASA Astrophysics Data System (ADS)

Chen, G.; Hayes, D. J.; Tian, H.

2013-12-01

Planted forest area in the United States gradually increased during the last half century, and by 2007 accounted for about 20% of the total forest area in the southern United States and about 13% in the entire country. Intensive plantation management activities - such as slash burning, thinning, weed control, fertilization and the use of genetically improved seedlings - are routinely applied during the forest rotation. However, no comprehensive assessments have been made to examine the impacts of this increased forest plantation area and associated management practices on ecosystem function. In this study, we integrated field measurement data and process-based modeling to quantitatively estimate the changes in carbon storage, nitrogen cycling and water use as influenced by forest plantations in the United States from 1925 to 2007. The results indicated that forest plantations and management practices greatly increased forest productivity, vegetation carbon, and wood product carbon storage in the United States, but slightly reduce soil carbon storage at some areas; however, the carbon sink induced by forest plantations was at the expense of more water use as represented by higher evapotranspiration. Stronger nitrogen and water limitations were found for forest plantations as compared to natural or naturally-regenerated forests.

Forests of the Northern United States

Treesearch

Stephen R. Shifley; Francisco X. Aguilar; Nianfu Song; Susan I. Stewart; David J. Nowak; Dale D. Gormanson; W. Keith Moser; Sherri Wormstead; Eric J. Greenfield

2012-01-01

Bounded by Maine, Maryland, Missouri, and Minnesota, the 20 Northern States have a larger population and a higher proportion of forest cover than other comparably sized U.S. regions. Forest-associated issues across the North include insect and disease pests, invasive species, forest management capacity, management standards, biodiversity, forest fragmentation, water...

Recollections of learning-disabled adolescents of their schooling experiences: a qualitative study.

PubMed

Karande, Sunil; Mahajan, Vidur; Kulkarni, Madhuri

2009-09-01

Little is known about the actual impact of the schooling experience on adolescents with specific learning disability (SpLD). To analyze the recollections of adolescents with SpLD who were undergoing education in regular mainstream schools. Prospective interview-based study conducted in our clinic. Adolescents' responses to a semi-structured interview were audio-taped, transcribed verbatim and interpreted by content analysis. The number of participants was determined by 'saturation sampling,' resulting in a total of 30 adolescents. Twelve (40%) adolescents had 'overall' neutral recollections, 9 (30%) had 'overall' positive recollections and 9 (30%) had 'overall' negative recollections about having SpLD during their schooling. Fourteen (46.7%) adolescents stated 'getting provisions' as good features, whereas 7 (23.3%) stated 'feeling different from classmates' and 6 (20%) stated 'being teased by classmates about their disability' as bad features of having SpLD. Nineteen (63.3%) adolescents remembered classroom teachers being supportive, while 7 (23.3%) remembered being insulted by them. Of the 21 adolescents who had undergone remedial education, only 10 (47.6%) acknowledged that it had benefited them. Twenty-one (70%) adolescents stated that availing provisions helped in getting better marks in examinations. Ten (33.3%) adolescents had negative recollections about their parents' behavior in relation to their disability. Twenty (66.7%) adolescents wanted changes in their school to help students with SpLD. Improving the knowledge of classroom teachers, classmates and family members about SpLD and about the rationale of provisions will help reduce the unpleasant experiences students with SpLD undergo during their schooling years.

Human Health Impacts of Forest Fires in the Southern United States: A Literature Review

Treesearch

Cynthia T. Fowler

2003-01-01

Forestry management practices can shape patterns of health, illness, and disease. A primary goal for owners federal, state, andprivate forests is to crap ecosystem management plans that simultaneously optimize forest health and human health. Fire-a major forest management issue in the United States-complicates these goals. Wildfires are natural phenomena with...

Recent drought conditions in the Conterminous United States

Treesearch

Frank H. Koch; William D. Smith; John W. Coulston

2013-01-01

Droughts are common in virtually all U.S. forests, but their frequency and intensity vary widely both between and within forest ecosystems (Hanson and Weltzin 2000). Forests in the Western United States generally exhibit a pattern of annual seasonal droughts. Forests in the Eastern United States tend to exhibit one of two prevailing patterns: random occasional droughts...

Forest health monitoring in the United States: focus on national reports

Treesearch

Kurt Riitters; Kevin Potter

2013-01-01

The health and sustainability of United States forests have been monitored for many years from several different perspectives. The national Forest Health Monitoring (FHM) Program was established in 1990 by Federal and State agencies to develop a national system for monitoring and reporting on the status and trends of forest ecosystem health. We describe and illustrate...

Forest management and water in the United States [Chapter 13

Treesearch

Daniel G. Neary

2017-01-01

This chapter outlines a brief history of the United States native forests and forest plantations. It describes the past and current natural and plantation forest distribution (map, area, main species), as well as main products produced (timber, pulp, furniture, etc.). Integrated into this discussion is a characterization of the water resources of the United States and...

Proceedings: third lake states forest tree improvement conference

Treesearch

Forest Service U.S.

1958-01-01

The Third Lake States Forest Tree Improvement Conference culminated the activities of the Lake States Forest Tree Improvement Committee and offered an opportmity to report on committee work for the past biennium. It also provided an important means for the Committee to meet its major objective - the encouraging and coordinating of forest tree improvement activities in...

Chapter 1. Approach: The flammulated, boreal, and great gray owl assessments

Treesearch

Gregory D. Hayward

1994-01-01

This forest owl conservation assessment focuses on three species of forest owls that occur on national forest lands in the United States. Sixteen other species of owls also regularly breed in the United States, but these three species were designated "sensitive" on forests in more than one region of the Forest Service in 1992. Within the National Forest...

Combining forest inventory, satellite remote sensing, and geospatial data for mapping forest attributes of the conterminous United States

Treesearch

Mark Nelson; Greg Liknes; Charles H. Perry

2009-01-01

Analysis and display of forest composition, structure, and pattern provides information for a variety of assessments and management decision support. The objective of this study was to produce geospatial datasets and maps of conterminous United States forest land ownership, forest site productivity, timberland, and reserved forest land. Satellite image-based maps of...

Sarcodon in the Neotropics II: four new species from Colombia and a key to the regional species.

PubMed

Grupe, Arthur C; Vasco-Palacios, Aída Marcela; Smith, Matthew E; Boekhout, Teun; Henkel, Terry W

2016-01-01

This work reports on four species of the ectomycorrhizal (ECM) tooth fungus genus Sarcodon (Bankeraceae, Thelephorales, Basidiomycota) recently discovered in the Colombian Amazon. Sarcodon colombiensis sp. nov., Sarcodon rufobrunneus sp. nov., Sarcodon pallidogriseus sp. nov. and Sarcodon bairdii sp. nov. are described as new to science. These fungi occur in forests dominated by ECM trees in the genera Pseudomonotes (Dipterocarpaceae), Dicymbe (Fabaceae subfam. Caesalpinioideae) and Aldina (Fabaceae subfam. Papilionoideae). These records bring the number of Sarcodon species known from the Neotropics to 10. Each of the new species possesses the accepted diagnostic characters for the genus: pileate-stipitate stature, a dentate hymenophore, determinate basidiomata development, fleshy, non-zonate context, and brown, tuberculate basidiospores. Molecular phylogenetic analysis corroborated the generic placement of the species, and, in combination with morphological characters, confirmed that they are new to science. Macromorphological, micromorphological, habitat and DNA sequence data from the nuc rDNA internal transcribed spacer region (ITS) are provided for each of the new species. A key is provided that allows identification of all known Neotropical Sarcodon species and similar extralimital taxa. © 2016 by The Mycological Society of America.

Biomass and Habitat Characteristics of Epiphytic Macroalgae in the Sibuti Mangroves, Sarawak, Malaysia

PubMed Central

Isa, Hasmidah Md; Kamal, Abu Hena Mustafa; Idris, Mohd Hanafi; Rosli, Zamri; Ismail, Johan

2017-01-01

Mangroves support diverse macroalgal assemblages as epibionts on their roots and tree trunks. These algae provide nutrients to the primary consumers in the aquatic food web and have been reported to be substantial contributors to marine ecosystems. The species diversity, biomass, and habitat characteristics of mangrove macroalgae were investigated at three stations in the Sibuti mangrove estuary, Sarawak, Malaysia, from November 2012 to October 2013. Three groups of macroalgae were recorded and were found to be growing on mangrove prop roots, namely Rhodophyta (Caloglossa ogasawaraensis, Caloglossa adhaerens, Caloglossa stipitata, Bostrychia anomala, and Hypnea sp.), Chlorophyta (Chaetomorpha minima and Chaetomorpha sp.), and Phaeophyta (Dictyota sp.). The biomass of macroalgae was not influenced (p>0.05) by the season in this mangrove forest habitat. The macroalgal species Hypnea sp. contributed the highest biomass at both Station 1 (210.56 mg/cm2) and Station 2 (141.72 mg/cm2), while the highest biomass was contributed by B. anomala (185.89 mg/cm2) at Station 3. This study shows that the species distribution and assemblages of mangrove macroalgae were influenced by environmental parameters such as water nutrients, dissolved solids, and salinity in the estuarine mangrove habitats of Sibuti, Sarawak. PMID:28228913

Biomass and Habitat Characteristics of Epiphytic Macroalgae in the Sibuti Mangroves, Sarawak, Malaysia.

PubMed

Isa, Hasmidah Md; Kamal, Abu Hena Mustafa; Idris, Mohd Hanafi; Rosli, Zamri; Ismail, Johan

2017-01-01

Mangroves support diverse macroalgal assemblages as epibionts on their roots and tree trunks. These algae provide nutrients to the primary consumers in the aquatic food web and have been reported to be substantial contributors to marine ecosystems. The species diversity, biomass, and habitat characteristics of mangrove macroalgae were investigated at three stations in the Sibuti mangrove estuary, Sarawak, Malaysia, from November 2012 to October 2013. Three groups of macroalgae were recorded and were found to be growing on mangrove prop roots, namely Rhodophyta ( Caloglossa ogasawaraensis , Caloglossa adhaerens , Caloglossa stipitata , Bostrychia anomala, and Hypnea sp.), Chlorophyta ( Chaetomorpha minima and Chaetomorpha sp.), and Phaeophyta ( Dictyota sp.). The biomass of macroalgae was not influenced ( p >0.05) by the season in this mangrove forest habitat. The macroalgal species Hypnea sp. contributed the highest biomass at both Station 1 (210.56 mg/cm 2 ) and Station 2 (141.72 mg/cm 2 ), while the highest biomass was contributed by B. anomala (185.89 mg/cm 2 ) at Station 3. This study shows that the species distribution and assemblages of mangrove macroalgae were influenced by environmental parameters such as water nutrients, dissolved solids, and salinity in the estuarine mangrove habitats of Sibuti, Sarawak.

Laser sculpting of atomic sp, sp(2) , and sp(3) hybrid orbitals.

PubMed

Liu, Chunmei; Manz, Jörn; Yang, Yonggang

2015-01-12

Atomic sp, sp(2) , and sp(3) hybrid orbitals were introduced by Linus Pauling to explain the nature of the chemical bond. Quantum dynamics simulations show that they can be sculpted by means of a selective series of coherent laser pulses, starting from the 1s orbital of the hydrogen atom. Laser hybridization generates atoms with state-selective electric dipoles, opening up new possibilities for the study of chemical reaction dynamics and heterogeneous catalysis. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

36 CFR 230.36 - State priority plan-purpose and scope.

Code of Federal Regulations, 2010 CFR

2010-07-01

...—purpose and scope. (a) The State priority plan shall be used to guide FLEP implementation in each... describe the various roles and responsibilities of the State Forester, State Forest Stewardship... private forest and agroforestry resources; (3) Identification of the desired objectives and environmental...

Three new species of Pergalumna (Acari: Oribatida: Galumnidae) from the tropical rainforest of Veracruz, Mexico.

PubMed

Palacios-Vargas, José G; Villagomez, Fernando

2017-03-09

Three new species of oribatid mites of the genus Pergalumna from a tropical rain forest in Veracruz, Mexico are described. Pergalumna hypergranulosa sp. nov. differs from Pergalumna granulatus Balogh & Mahunka, 1967 by unilaterally barbulated bothridial setae, elongated notogastric porose areas, and also a more profuse granulation of the cerotegument. Pergalumna obsidiana sp. nov. differs from P. granulatus by the unilateral barbulation of bothridial setae and the presence of protuberances on the genital plates; from Pergalumna paralongisetosa Ermilov & Kalúz, 2012 by a diverging cerotegumental granulation on the notogaster. Pergalumna dactylaris sp. nov. differs from Pergalumna striata (Pérez-Íñigo & Baggio, 1980) by its bigger size and the presence of three notogastric porose areas instead of four and from Pergalumna decorata Balogh & Mahunka, 1977, also by the bigger size, a different position of setae lm and la and smaller but not minute interlamellar setae. These are the first Mexican species descriptions of this genus.

Densities of breeding birds and changes in vegetation in an alaskan boreal forest following a massive disturbance by spruce beetles

USGS Publications Warehouse

Matsuoka, S.M.; Handel, C.M.; Ruthrauff, D.R.

2001-01-01

We examined bird and plant communities among forest stands with different levels of spruce mortality following a large outbreak of spruce beetles (Dendroctonus rufipennis (Kirby)) in the Copper River Basin, Alaska. Spruce beetles avoided stands with black spruce (Picea mariana) and selectively killed larger diameter white spruce (Picea glauca), thereby altering forest structure and increasing the dominance of black spruce in the region. Alders (Alnus sp.) and crowberry (Empetrum nigrum) were more abundant in areas with heavy spruce mortality, possibly a response to the death of overstory spruce. Grasses and herbaceous plants did not proliferate as has been recorded following outbreaks in more coastal Alaskan forests. Two species closely tied to coniferous habitats, the tree-nesting Ruby-crowned Kinglet (Regulus calendula) and the red squirrel (Tamiasciurus hudsonicus), a major nest predator, were less abundant in forest stands with high spruce mortality than in low-mortality stands. Understory-nesting birds as a group were more abundant in forest stands with high levels of spruce mortality, although the response of individual bird species to tree mortality was variable. Birds breeding in stands with high spruce mortality likely benefited reproductively from lower squirrel densities and a greater abundance of shrubs to conceal nests from predators.

Toward ambient temperature operation with all-solid-state lithium metal batteries with a sp3 boron-based solid single ion conducting polymer electrolyte

NASA Astrophysics Data System (ADS)

Zhang, Yunfeng; Cai, Weiwei; Rohan, Rupesh; Pan, Meize; Liu, Yuan; Liu, Xupo; Li, Cuicui; Sun, Yubao; Cheng, Hansong

2016-02-01

The ionic conductivity decay problem of poly(ethylene oxide) (PEO)-based solid polymer electrolytes (SPEs) when increase the lithium salt of the SPEs up to high concentration is here functionally overcome by the incorporation of a charge delocalized sp3 boron based single ion conducting polymer electrolyte (SIPE) with poly(ethylene oxide) to fabricate solid-state sp3 boron based SIPE membranes (S-BSMs). By characterizations, particularly differential scanning calorimeter (DSC) and ionic conductivity studies, the fabricated S-BSMs showed decreased melting points and increased ionic conductivity as steadily increase the content of sp3 boron based SIPE, which significantly improved the low temperature performance of the all-solid-state lithium batteries. The fabricated Li | S-BSMs | LiFePO4 cells exhibit highly electrochemical stability and excellent cycling at temperature below melting point of PEO, which has never been reported so far for SIPEs based all-solid-state lithium batteries.

Decline of forest interior conditions in the conterminous United States

EPA Science Inventory

Forest fragmentation threatens the sustainability of forest interior environments, thereby endangering subordinate ecological attributes and functions. We analyzed the spatial patterns of forest disturbance and recovery for the conterminous United States from 2001 to 2006 to det...

Environmental assessment hot spots of perforated forest in the eastern United States

Treesearch

Kurt H. Riitters; John W. Coulston

2005-01-01

National assessments of forest fragmentation satisfy international biodiversity conventions, but they do not identify specific places where ecological impacts are likely. In this article, we identify geographic concentrations (hot spots) of forest located near holes in otherwise intact forest canopies (perforated forest) in the eastern United States, and we describe...

Fragmentation of forest communities in the eastern United States

Treesearch

Kurt Riitters; John Coulston; James Wickham

2011-01-01

Forest fragmentation threatens the sustainability of forest communities in the eastern United States. Forest communities exhibiting either a low total area or low percentage of intact forest are subject to relatively higher risk of shifts in stand composition towards edge-adapted and invasive species. Such changes in stand composition could result in local extirpation...

Decline of forest interior conditions in the conterminous United States

Treesearch

Kurt H. Riitters; James D. Wickham

2012-01-01

Forest fragmentation threatens the sustainability of forest interior environments, thereby endangering subordinate ecological attributes and functions. We analyzed the spatial patterns of forest loss and gain for the conterminous United States from 2001 to 2006 to determine whether forest interior environments were maintained at five spatial scales. A 1.1% net loss of...

Forest Resources of the United States, 1997, METRIC UNITS.

Treesearch

W. Brad Smith; John S. Vissage; Davie R. Darr; Raymond M. Sheffield

2002-01-01

Forest resource statistics from the 1987 Forest Resources Planning Act (RPA) Asessment were updated to 1997 to provide current information on the Nation's forests. Resource tables present estimates in metric measure of forest area, volume, mortality, growth, removals, and timber products output in various ways, such as by ownership, region, or State.

Shifting forest value orientations in the United States, 1980-2001: A computer content analysis

Treesearch

David N. Bengston; Trevor J. Webb; David P. Fan

2004-01-01

This paper examines three forest value orientations - clusters of interrelated values and basic beliefs about forests - that emerged from an analysis of the public discourse about forest planning, management, and policy in the United States. The value orientations include anthropocentric, biocentric, and moral/spiritual/aesthetic orientations toward forests. Computer...

Notes on the phlebotomine sand flies from the Peruvian southeast--I. Description of Lutzomyia (Helcocyrtomyia) adamsi n. sp. (Diptera: Psychodidae).

PubMed

Fernandez, R; Galati, E B; Carbajal, F; Wooster, M T; Watts, D M

1998-01-01

A new species of phlebotomine sand fly, Lutzomyia adamsi n. sp., is described and illustrated from specimens collected during August 1994, in Sandia, Department of Puno-Peru. According to the Oficina Nacional de Evaluacion de Recursos Naturales(ONERN 1976), this locality is situated in the life zone known as humid, mountain, low tropical forest (bh-MBT). Many areas in the northern part of Puno, mainly in the Inambari and Tambopata basins, are endemic to leishmaniasis. These areas are the continuation of others, largely known as "leishmaniasic" in the departments of Cusco and Madre de Dios. The morphological characteristics indicated that this species belongs to the genus Lutzomyia, subgenus Helcocyrtomyia Barretto, 1962.

Size of forest holdings and family forests: implications for forest management in South Carolina.

Treesearch

Brian Williams; Thomas Straka; Richard Harper

2012-01-01

There are about 11.3 million private forest owners in the United States; of those, 10.4 million are family forest owners who control 62% of the nation's private timberland. South Carolina has about 262,000 family forest owners who control almost two-thirds of the state's private timberland (Butler, 2008). In the recent past, these ownerships were generally...

The mangement of national forests of eastern United States for non-timber forest products

Treesearch

James L. Chamberlain

2000-01-01

Many products are harvested fiom the forests of the United States in addition to timber. These non-timber forest products (NTFPs) are plants, parts of plants, or fungi that are harvested from within and on the edges of natural, disturbed or managed forests. Often, NTFPs are harvested from public forests for the socio-economic benefit they provide to rural collectors....

Effects of federal, state, and local tax policies on family forest owners

Treesearch

Brett J. Butler; Jaketon H. Hewes; Paul Catanzaro; John L. Greene; Michael A. Kilgore; al. et.

2011-01-01

There are over 10 million family forest owners1 across the U.S. (Butler 2008). Collectively they control 264 million acres or 35% of the nation�fs forest land (Butler 2008; Figure 1); in some states, the percentage of family forest ownership can be over 75% (Figure 2). If the forestry and conservation community is interested in keeping forests as forests and...

Methods for calculating forest ecosystem and harvested carbon with standard estimates for forest types of the United States

Treesearch

James E. Smith; Linda S. Heath; Kenneth E. Skog; Richard A. Birdsey

2006-01-01

This study presents techniques for calculating average net annual additions to carbon in forests and in forest products. Forest ecosystem carbon yield tables, representing stand-level merchantable volume and carbon pools as a function of stand age, were developed for 51 forest types within 10 regions of the United States. Separate tables were developed for...

Map of distribution of six forest ownership types in the conterminous United States

Treesearch

Jaketon H. Hewes; Brett J. Butler; Greg C. Liknes; Mark D. Nelson; Stephanie A. Snyder

2014-01-01

This map depicts the spatial distribution of ownership types across forest land in the conterminous United States circa 2009. The distribution is derived, in part, from Forest Inventory and Analysis (FIA) data that are collected at a sample intensity of approximately one plot per 2400 ha across the United States (U.S. Forest Service 2012). Ownership categories were...

Chapter4 - Drought patterns in the conterminous United States and Hawaii.

Treesearch

Frank H. Koch; William D. Smith; John W. Coulston

2014-01-01

Droughts are common in virtually all U.S. forests, but their frequency and intensity vary widely both between and within forest ecosystems (Hanson and Weltzin 2000). Forests in the Western United States generally exhibit a pattern of annual seasonal droughts. Forests in the Eastern United States tend to exhibit one of two prevailing patterns: random occasional droughts...

Futures project anticipates changes and challenges facing forests of the northern United States

Treesearch

Stephen R. Shifley; W. Keith Moser; Michael E. Goerndt; Nianfu Song; Mark D. Nelson; David J. Nowak; Patrick D. Miles; Brett J. Butler; Ryan D. DeSantis; Francisco X. Aguilar; Brian G. Tavernia

2014-01-01

The Northern Forest Futures Project aims to reveal how today's trends and choices are likely to change the future forest landscape in the northeastern and midwestern United States. The research is focused on the 20-state quadrant bounded by Maine, Maryland, Missouri, and Minnesota. This area, which encompasses most of the Central Hardwood Forest region, is the...

The scientific basis for conserving forest carnivores: American marten, fisher, lynx, and wolverine in the western United States.

Treesearch

Leonard F. Ruggiero; Keith B. Aubry; Steven W. Buskirk; L. Jack Lyon; William J. Zielinski

1994-01-01

This cooperative effort by USDA Forest Service Research and the National Forest System assesses the state of knowledge related to the conservation status of four forest carnivores in the western United States: American marten, fisher, lynx, and wolverine. The conservation assessment reviews the biology and ecology of these species. It also discusses management...

Mimicking Nonequilibrium Steady States with Time-Periodic Driving

NASA Astrophysics Data System (ADS)

Raz, Oren; Subasi, Yigit; Jarzynski, Christopher

Under static conditions, a system satisfying detailed balance generically relaxes to an equilibrium state in which there are no currents: to generate persistent currents, either detailed balance must be broken or the system must be driven in a time-dependent manner. A stationary system that violates detailed balance evolves to a nonequilibrium steady state (NESS) characterized by fixed currents. Conversely, a system that satisfies instantaneous detailed balance but is driven by the time-periodic variation of external parameters - also known as a stochastic pump (SP) - reaches a periodic state with non-vanishing currents. In both cases, these currents are maintained at the cost of entropy production. Are these two paradigmatic scenarios effectively equivalent? For discrete-state systems we establish a mapping between NESS and SP. Given a NESS characterized by a particular set of stationary probabilities, currents and entropy production rates, we show how to construct a SP with exactly the same (time-averaged) values. The mapping works in the opposite direction as well. These results establish a proof of principle: they show that SP are able to mimic the behavior of NESS, and vice-versa, within the theoretical framework of discrete-state stochastic thermodynamics.

Ergot species of the Claviceps purpurea group from South Africa.

PubMed

van der Linde, Elna J; Pešicová, Kamila; Pažoutová, Sylvie; Stodůlková, Eva; Flieger, Miroslav; Kolařík, Miroslav

2016-08-01

Results of a survey and study of the Claviceps purpurea group of species in South Africa are being presented and five new species are described. Morphological descriptions are based on the anamorphs and four nuclear genetic loci. Claviceps fimbristylidis sp. nov. on Fimbristylis complanata was discovered wide-spread across five provinces of the country associated with water and represents the fourth Claviceps species recorded from the Cyperaceae. Claviceps monticola sp. nov. is described from Brachypodium flexum growing in mountain forests in Mpumalanga Province, as well as the northern Drakensberg southwards into the Eastern Cape Province. Claviceps pazoutovae sp. nov. is recorded from Stipa dregeana var. dregeana and Ehrharta erecta var. erecta, also associated with these mountain ranges. Claviceps macroura sp. nov. is recorded from Cenchrus macrourus from the Eastern Cape and Claviceps capensis sp. nov. from Ehrharta villosa var. villosa is recorded from the Western Cape Province. Claviceps cyperi, only recorded from South Africa is included in the study. Ergot alkaloid profiles of all species are provided and showed similarity to C. purpurea. Only C. cyperi and in lesser degree C. capensis, C. macroura, and C. pazoutovae produced ergot alkaloids in clinically significant amounts. Several reported species infect invasive grass species, native to South Africa, and thus represent potentially invasive species. Copyright © 2016 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

New Podoscirtine crickets (Orthoptera: Gryllidae; Podoscirtinae) from National Natural Park Amacayacu, Amazonas, Colombia.

PubMed

Cadena-Castañeda, Oscar J; Noriega, Jorge Ari

2015-03-30

We describe six new species of crickets from the subfamily Podoscirtinae in the family Gryllidae from the "Amacayacu" National Park: Diatrypa (Latispeculum) didieri n. sp. (Aphonoidini: Diatrypina), Ectotrypa brachyptera n. sp. (Paroecanthini: Paroecanthina), Aphonomorphus (Aphonomorphus) desutterae n. sp., Aphonomorphus (Euaphonus) andreae n. sp., Aphonomorphus (Euaphonus) gorochovi n. sp., and Aphonomorphus (Nigraphonus) otavoi n. sp. (Podoscirtini: Aphonomorphina). Nigraphonus n. subgen. is proposed as a new subgenus of Aphonomorphus, grouping the species with unclear position into Neoaphonus (A. obscurus Chopard, 1956 n. comb., A. parobscurus Gorochov, 2010 n. comb., and A. nigra n. sp.). The state of knowledge of Podoscirtinae in Colombia is discussed.

Egg Parasitoids of Proconiini (Hemiptera: Cicadellidae) in Northwestern Mexico, with Description of a New Species of Gonatocerus (Hymenoptera: Mymaridae)

PubMed Central

Triapitsyn, Serguei V.; Bernal, Julio S.

2009-01-01

Nine species of Mymaridae and Trichogrammatidae parasitic on eggs of Proconiini sharpshooters (Cicadellidae: Cicadellinae) were collected in northwestern Mexico in relation to neoclassical biological control efforts against glassy-winged sharpshooter, Homalodisca vitripennis (Germar), in California. Gonatocerus chula Triapitsyn and Bernal sp. n., which belongs to the ater species group of Gonatocerus Nees (Mymaridae), is described. Specimens of G. chula sp. n. were reared from eggs of the smoke-tree sharpshooter, Homalodisca liturata Ball, on jojoba [Simmondsia chinensis (Link) C. K. Schneider] leaves collected in central Sonora state, Mexico. Also given are new data on other egg parasitoids of Homalodisca spp. and Oncometopia spp. in Sinaloa and Sonora states, Mexico, including Gonatocerus atriclavus Girault, G. morrilli (Howard), and G. novifasciatus Girault, and the Trichogrammatidae Burksiella sp(p)., Ittys sp., Pseudoligosita sp., Ufens ceratus Owen, and U. principalis Owen. For the first time, a species of Ittys is recorded from eggs of Proconiini, and U. principalis from Mexico. Colonies of G. atriclavus, G. novifasciatus and Pseudoligosita sp. were successfully established in a quarantine laboratory at University of California, Riverside, on eggs of the glassy-winged sharpshooter. These three parasitoid species had never been reared under laboratory conditions. In addition, seven species of Proconiini were collected in central and northwestern Mexico: Cyrtodisca major (Signoret), Homalodisca insolita (Walker), H. liturata Ball, Oncometopia sp. cf. clarior (Walker), O. sp. cf. trilobata Melichar, O. (Similitopia) sp., and Phera centrolineata (Signoret). Oncometopia sp. cf. clarior, O. sp. cf. trilobata, and O. (Similitopia) sp. appeared to be undescribed species. PMID:19611244

The Southern Forest Futures Project: technical report

Treesearch

David N. Wear; John G. Greis

2013-01-01

Please visit the Southern Forest Futures Project website for more information.The Southern Forest Futures Project provides a science-based “futuring” analysis of the forests of the 13 States of the Southeastern United States. With findings...

Four New Species of Eimeria (Apicomplexa: Eimeriidae) from Emoia spp. Skinks (Sauria: Scincidae), from Papua New Guinea and the Insular Pacific.

PubMed

McAllister, Chris T; Duszynski, Donald W; Austin, Christopher C; Fisher, Robert N

2017-02-01

Between September and November 1991, 54 adult skinks from 15 species were collected by hand or blowpipe from several localities on Rarotonga, Cook Islands, Ovalau Island, Fiji, and Papua New Guinea (PNG), and their feces were examined for coccidians. Species included 5 seaside skinks (Emoia atrocostata), 1 Pacific blue-tailed skink (Emoia caeroleocauda), 2 Fiji slender treeskinks (Emoia concolor), 15 white-bellied copper-striped skinks (Emoia cyanura), 1 Bulolo River forest skink (Emoia guttata), 6 dark-bellied copper-striped skinks (Emoia impar), 5 Papua five-striped skinks (Emoia jakati), 2 Papua slender treeskinks (Emoia kordoana), 3 Papua robust treeskinks (Emoia longicauda), 1 brown-backed forest skink (Emoia loveridgei), 3 Papua black-sided skinks (Emoia pallidiceps), 2 Papua white-spotted skinks (Emoia physicae), 2 Papua yellow-head skinks (Emoia popei), 1 Papua brown forest skink (Emoia submetallica), and 5 Fiji barred treeskinks (Emoia trossula) Species of Eimeria (Ei.) were detected from these Emoia (Em.) spp. and are described here as new. Oocysts of Eimeria iovai n. sp. from Em. pallidiceps from PNG were ellipsoidal with a bilayered wall (L × W) 26.5 × 18.1 μm, with a length/width ratio (L/W) of 1.1. Both micropyle and oocyst residuum were absent, but a fragmented polar granule was present. This eimerian also was found in Em. atrocostata from PNG. Oocysts of Eimeria kirkpatricki n. sp. from Em. atrocostata from PNG were ellipsoidal with a bilayered wall, 18.6 × 13.5 μm, L/W 1.4. A micropyle and oocyst residuum were absent, but a fragmented polar granule was present. This eimerian was also shared by Em. cyanura from the Cook Islands and Fiji, Em. impar from the Cook Islands, Em. loveridgei from PNG, Em. pallidiceps from PNG, Em. popei from PNG, and Em. submetallica from PNG. Oocysts of Eimeria stevejayuptoni n. sp. from Em. longicauda were subspheroidal to ellipsoidal with a bilayered wall, 18.7 × 16.6 μm, L/W 1.1. A micropyle and oocyst residuum were absent, but a fragmented polar granule was present. Oocysts of Eimeria emoia n. sp. from Em. longicauda from PNG were cylindroidal with a bilayered wall, 29.2 × 15.7 μm, L/W 1.9. A micropyle and oocyst residuum were absent, but a polar granule was present. These are the first eimerians reported from Emoia spp. and they add to our growing knowledge of the coccidian fauna of scincid lizards of the South Pacific.

Visitor Preferences for Visual Changes in Bark Beetle-Impacted Forest Recreation Settings in the United States and Germany

NASA Astrophysics Data System (ADS)

Arnberger, Arne; Ebenberger, Martin; Schneider, Ingrid E.; Cottrell, Stuart; Schlueter, Alexander C.; von Ruschkowski, Eick; Venette, Robert C.; Snyder, Stephanie A.; Gobster, Paul H.

2018-02-01

Extensive outbreaks of tree-killing insects are increasing across forests in Europe and North America due to climate change and other factors. Yet, little recent research examines visitor response to visual changes in conifer forest recreation settings resulting from forest insect infestations, how visitors weigh trade-offs between physical and social forest environment factors, or how visitor preferences might differ by nationality. This study explored forest visitor preferences with a discrete choice experiment that photographically simulated conifer forest stands with varying levels of bark beetle outbreaks, forest and visitor management practices, and visitor use levels and compositions. On-site surveys were conducted with visitors to State Forest State Park in Colorado ( n = 200), Lake Bemidji State Park in Minnesota ( n = 228), and Harz National Park in Germany ( n = 208). Results revealed that the condition of the immediate forest surrounding was the most important variable influencing visitors' landscape preferences. Visitors preferred healthy mature forest stands and disliked forests with substantial dead wood. The number of visitors was the most important social factor influencing visitor landscape preferences. Differences in the influence of physical and social factors on visual preferences existed between study sites. Findings suggest that both visual forest conditions and visitor use management are important concerns in addressing landscape preferences for beetle-impacted forest recreation areas.

Visitor Preferences for Visual Changes in Bark Beetle-Impacted Forest Recreation Settings in the United States and Germany.

PubMed

Arnberger, Arne; Ebenberger, Martin; Schneider, Ingrid E; Cottrell, Stuart; Schlueter, Alexander C; von Ruschkowski, Eick; Venette, Robert C; Snyder, Stephanie A; Gobster, Paul H

2018-02-01

Extensive outbreaks of tree-killing insects are increasing across forests in Europe and North America due to climate change and other factors. Yet, little recent research examines visitor response to visual changes in conifer forest recreation settings resulting from forest insect infestations, how visitors weigh trade-offs between physical and social forest environment factors, or how visitor preferences might differ by nationality. This study explored forest visitor preferences with a discrete choice experiment that photographically simulated conifer forest stands with varying levels of bark beetle outbreaks, forest and visitor management practices, and visitor use levels and compositions. On-site surveys were conducted with visitors to State Forest State Park in Colorado (n = 200), Lake Bemidji State Park in Minnesota (n = 228), and Harz National Park in Germany (n = 208). Results revealed that the condition of the immediate forest surrounding was the most important variable influencing visitors' landscape preferences. Visitors preferred healthy mature forest stands and disliked forests with substantial dead wood. The number of visitors was the most important social factor influencing visitor landscape preferences. Differences in the influence of physical and social factors on visual preferences existed between study sites. Findings suggest that both visual forest conditions and visitor use management are important concerns in addressing landscape preferences for beetle-impacted forest recreation areas.

Black and gold howler monkeys (Alouatta caraya) as sentinels of ecosystem health: patterns of zoonotic protozoa infection relative to degree of human-primate contact.

PubMed

Kowalewski, Martin M; Salzer, Johanna S; Deutsch, Joseph C; Raño, Mariana; Kuhlenschmidt, Mark S; Gillespie, Thomas R

2011-01-01

Exponential expansion of human populations and human activities within primate habitats has resulted in high potential for pathogen exchange creating challenges for biodiversity conservation and global health. Under such conditions, resilient habitat generalists such as black and gold howler monkeys (Alouatta caraya) may act as effective sentinels to overall ecosystem health and alert us to impending epidemics in the human population. To better understand this potential, we examined noninvasively collected fecal samples from black and gold howler monkeys from remote, rural, and village populations in Northern Argentina. We examined all samples (n=90) for the zoonotic protozoa Cryptosporidium sp. and Giardia sp. via immunofluorescent antibody (IFA) detection. All samples were negative for Cryptosporidium sp. The prevalence of Giardia sp. was significantly higher at the rural site (67%) compared with the remote forest (57%) and village (40%) sites. A lack of Cryptosporidium sp. in all samples examined suggests that this pathogen is not a natural component of the howler parasite communities at these sites and that current land-use patterns and livestock contact are not exposing Argentine howler monkeys to this pathogen. High prevalence of Giardia sp. at all sites suggests that howler monkeys may serve as a viable reservoir for Giardia. Significantly higher prevalence of Giardia sp. at the rural site, where primate-livestock contact is highest, suggests the presence of multiple Giardia clades or increased exposure to Giardia through repeated zoonotic transmission among nonhuman primates, livestock, and/or people. These results highlight the need for future research into the epidemiology, cross-species transmission ecology, and clinical consequences of Giardia and other infectious agents not only in humans and livestock, but also in the wild animals that share their environments. © 2010 Wiley-Liss, Inc.

A new species of Stigmatomma from Taiwan (Hymenoptera, Formicidae, Amblyoponinae)

PubMed Central

Hsu, Feng-Chuan; Esteves, Flavia A.; Chou, Lien-Siang; Lin, Chung-Chi

2017-01-01

Abstract Stigmatomma is the most speciose ant genus in the subfamily Amblyoponinae. In the present paper, the worker caste of a new species is described, S. luyiae sp. n., which was collected from a soil sample in a subtropical evergreen broad-leaved forest in Taiwan. An identification key to the females of Stigmatomma species with 11 antennomeres occurring in Asia is also provided. PMID:29118613

Managing across levels of government: evaluation of federal-state roles and responsibilities involving nonfederal forests in the United States

Treesearch

Paul V. Ellefson; Calder M. Hibbard; Michael A. Kilgore

2006-01-01

With the assistance of state foresters and federal agency executives, an evaluation was made of federal and state government roles and responsibilities focused nonfederal forests in the United States. The evaluation involved an inventory of legally (and administratively) defined federal roles, identification bf federal programs supporting accomplishment of such roles,...

New State Forest Practice Laws. A review of state laws and their natural resource data requirements

NASA Technical Reports Server (NTRS)

Klein, S. B.

1980-01-01

Forest practice regulations can be established by being specified in state law or by being promulgated by some other official body delegated the authority to do so. At the state level, public regulation of private forest practices resulted in many cases, in the enactment of state forest practice laws regulating both private, and in some cases, public landowner activities. These laws aim not only to protect natural environments, but also to encourage continuous productivity of forest lands, to maintain or enhance aesthetic values, and to serve as an implementing mechanism to control water pollution. Profiles of regulations in California, Idaho, Maine, Nevada, New Hampshire, Oregon, and Washington are examined and assessed. Voluntary guidelines in use in 18 states are summarized.

Assessing estimation techniques for missing plot observations in the U.S. forest inventory

Treesearch

Grant M. Domke; Christopher W. Woodall; Ronald E. McRoberts; James E. Smith; Mark A. Hatfield

2012-01-01

The U.S. Forest Service, Forest Inventory and Analysis Program made a transition from state-by-state periodic forest inventories--with reporting standards largely tailored to regional requirements--to a nationally consistent, annual inventory tailored to large-scale strategic requirements. Lack of measurements on all forest land during the periodic inventory, along...

Forest statistics of the United States, 1987.

Treesearch

Karen L. Waddell; Danlel D. Oswald; Douglas S. Powell

1989-01-01

The Forest and Rangeland Renewable Resources Planning Act (RPA) of 1974 (88 Stat. 476 as amended) directs the U.S. Department of Agriculture to conduct a comprehensive assessment of all forest and range land resources on both public and private lands. Forest resource data collected from periodic surveys in each State and Forest Service Region were entered into a...

Fragmentation of eastern United States forest types

Treesearch

Kurt H. Riitters; John W. Coulston

2013-01-01

Fragmentation is a continuing threat to the sustainability of forests in the Eastern United States, where land use changes supporting a growing human population are the primary driver of forest fragmentation (Stein and others 2009). While once mostly forested, approximately 40 percent of the original forest area has been converted to other land uses, and most of the...

Temporal trends of forest interior conditions in the United States

Treesearch

Kurt Riitters; James. Wickham

2012-01-01

Nature's benefits derived from forest interior environments cannot be sustained if the natural capital of forest interior area is not sustained. We analyzed the spatial patterns of forest loss and gain for the conterminous United States from 2001 to 2006 to determine whether forest interior environments were maintained at five spatial scales. A 1.1 percent net...

An early look at forest regeneration indicator results for the Midwest and Northeast United States

Treesearch

William H. McWilliams; James A. Westfall

2015-01-01

Interacting regeneration stressors create challenges for policy makers and managers who are tasked with making decisions for restoring forest following major disturbances, such as harvest or catastrophic mortality. Concern over an aging forest, dwindling young forest habitat, and restoration of native forests in the midwest and northeast United States has resulted in...

Productivity and carbon sequestration of forests in the southern United States

Treesearch

Kurt H. Johnsen; Tara L. Keyser; John R. Butnor; Carlos A. Gonzalez-Beenecke; Donald J. Kaczmarek; Chris A. Maier; Heather R. McCarthy; Ge. Sun

2014-01-01

Sixty percent of the Southern United States landscape is forested (Wear 2002). Forest types vary greatly among the five subregions of the South, which include the Coastal Plain, Piedmont, Appalachian-Cumberland, Mid-South, and the Mississippi Alluvial Valley. Current inventory data show upland hardwood forests being the predominant forest type in the South (>30...

Bat activity in selection harvests and intact forest canopy gaps at Indiana state forests

Treesearch

Scott Haulton; Kathryn L. DeCosta

2014-01-01

Forest managers often prescribe silvicultural methods based on how effectively they mimic the natural disturbance agents that have historically shaped the forests they manage. On Indiana state forests, selection systems are used on most harvested acreage and appear to structurally mimic the effects of naturally occurring, gap-forming disturbances affecting individual...

Family Forest Owner Trends in the Northern United States

Treesearch

Brett J. Butler; Zhao Ma

2011-01-01

Understanding forest ownership trends is critical for understanding forest trends. In the northern United States, where 55% of the forestland is controlled by families and individuals, it is imperative that we understand the trends within this complex and dynamic group of owners. The US Forest Service conducted forest landowner surveys across this region, and the rest...

Tennessee's Forests, 2004

Treesearch

Christopher M. Oswalt; Sonja N. Oswalt; Tony G. Johnson; James L. Chamberlain; KaDonna C. Randolph; John W. Coulston

2009-01-01

Forest land area in Tennessee amounted to 13.78 million acres. About 125 different species, mostly hardwood, account for an estimated 22.6 billion cubic feet of all growing-stock volume on timberland in the State. Hardwood forest types occupy the vast majority of the State's forest land, and oak-hickory is the dominant forest-type group, accounting for about 10.1...

Forest structure and fire hazard in dry forests of the Western United States

Treesearch

David L. Peterson; Morris C. Johnson; James K. Agee; Theresa B. Jain; Donald McKenzie; Elizabeth D. Reinhardt

2005-01-01

Fire, in conjunction with landforms and climate, shapes the structure and function of forests throughout the Western United States, where millions of acres of forest lands contain accumulations of flammable fuel that are much higher than historical conditions owing to various forms of fire exclusion. The Healthy Forests Restoration Act mandates that public land...

Forest statistics for Vermont: 1973 and 1983

Treesearch

Thomas S. Frieswyk; Anne M. Malley

1985-01-01

A statistical report on the fourth forest survey of Vermont conducted in 1982-1983 by the Forest Inventory and Analysis Unit, Northeastern Forest Experiment Station. Statistics for forest area, numbers of trees, timber volume, tree biomass, and timber products output are displayed at the state, unit, and county levels. The current inventory indicates that the state has...

Oregon’s forest resources, 2001–2010: ten-year Forest Inventory and Analysis report

Treesearch

Sheel Bansal; Leslie Brodie; Sharon Stanton; Karen Waddell; Marin Palmer; Glenn Christensen; Olaf Kuegler; John Chase; Joel Thompson; Sarah Jovan; Andrew Gray; Morgan Todd

2017-01-01

This report highlights key findings from a comprehensive vegetation survey of all forested land across the state of Oregon. A total of 5,180 forested field plots in Oregon were visited by Forest Inventory and Analysis (FIA) crews over a 10-year period from 2001 to 2010. Oregon has 30 million acres of forest, covering nearly half the state. The structure and composition...

Assessing double counting of carbon emissions between forest land cover change and forest wildfires: a case study in the United States, 1992-2006

Treesearch

Daolan Zheng; Linda S. Heath; Mark J. Ducey; Brad Quayle

2013-01-01

The relative contributions of double counting of carbon emissions between forest-to-nonforest cover change (FNCC) and forest wildfires are an unknown in estimating net forest carbon exchanges at large scales. This study employed land-cover change maps and forest fire data in the four representative states (Arkansas, California, Minnesota, and Washington) of the US for...

Psychrophrynella glauca sp. n., a new species of terrestrial-breeding frogs (Amphibia, Anura, Strabomantidae) from the montane forests of the Amazonian Andes of Puno, Peru

PubMed Central

Ttito, Alex

2018-01-01

We describe a new species of small strabomantid frog (genus Psychrophrynella) from a humid montane forest in the Peruvian Department of Puno. Specimens were collected at 2,225 m a.s.l. in the leaf litter of primary montane forest near Thiuni, along the Macusani–San Gabán road, in the province of Carabaya. The new species is assigned to Psychrophrynella on the basis of morphological similarity, including presence of a tubercle on the inner edge of the tarsus, and call composed of multiple notes. We also include genetic distances for 16S rRNA partial sequences between the new species and other strabomantid frogs. The species with lowest genetic distances are Psychrophrynella chirihampatu and Psychrophrynella usurpator. Psychrophrynella glauca sp. n. is readily distinguished from the three other species of Psychrophrynella (Psychrophrynella bagrecito, P. chirihampatu, and P. usurpator) by its small size, and by having belly and ventral surfaces of legs reddish-brown or red, and chest and throat brown to dark brown with a profusion of bluish-gray flecks. The new species is only known from its type locality. With the discovery of P. glauca, the geographic distribution of Psychrophrynella is extended to the Department of Puno, where it was no longer represented after the description of the genus Microkayla. Furthermore, the Cordillera de Carabaya is the only mountain range known to be home to four of the seven genera of Holoadeninae (Bryophryne, Microkayla, Noblella, and Psychrophrynella), suggesting an intriguing evolutionary history for this group in southern Peru. PMID:29507835

Family forest landowners' interest in forest carbon offset programs: Focus group findings from the Lake States, USA

Treesearch

Kristell A. Miller; Stephanie A. Snyder; Mike A. Kilgore; Mae A. Davenport

2014-01-01

In 2012, focus groups were organized with individuals owning 20+ acres in the Lake States region of the United States (Michigan, Minnesota, and Wisconsin) to discuss various issues related to forest carbon offsetting. Focus group participants consisted of landowners who had responded to an earlier mail-back survey (2010) on forest carbon offsets. Two focus groups were...

Forecasts of forest conditions in regions of the United States under future scenarios: a technical document supporting the Forest Service 2012 RPA Assessment

Treesearch

David N. Wear; Robert Huggett; Ruhong Li; Benjamin Perryman; Shan Liu

2013-01-01

The 626 million acres of forests in the conterminous United States represent significant reserves of biodiversity and terrestrial carbon and provide substantial flows of highly valued ecosystem services, including timber products, watershed protection benefits, and recreation. This report describes forecasts of forest conditions for the conterminous United States in...

Productivity of forests of the United States and its relation to soil and site factors and management practices: a review.

Treesearch

C.C. Grier; K.M. Lee; N.M. [and others] Nadkarni

1989-01-01

Data on net primary biological productivity of United States forests are summarized by geographic region. Site factors influencing productivity are reviewed. This paper is a review of existing literature in the productivity of various forest regions of the United States, the influence of site factors on forest productivity, and the impact of various...

Accuracy of non-invasive measurement of haemoglobin concentration by pulse co-oximetry during steady-state and dynamic conditions in liver surgery.

PubMed

Vos, J J; Kalmar, A F; Struys, M M R F; Porte, R J; Wietasch, J K G; Scheeren, T W L; Hendriks, H G D

2012-10-01

The Masimo Radical 7 (Masimo Corp., Irvine, CA, USA) pulse co-oximeter(®) calculates haemoglobin concentration (SpHb) non-invasively using transcutaneous spectrophotometry. We compared SpHb with invasive satellite-lab haemoglobin monitoring (Hb(satlab)) during major hepatic resections both under steady-state conditions and in a dynamic phase with fluid administration of crystalloid and colloid solutions. Thirty patients undergoing major hepatic resection were included and randomized to receive a fluid bolus of 15 ml kg(-1) colloid (n=15) or crystalloid (n=15) solution over 30 min. SpHb was continuously measured on the index finger, and venous blood samples were analysed in both the steady-state phase (from induction until completion of parenchymal transection) and the dynamic phase (during fluid bolus). Correlation was significant between SpHb and Hb(satlab) (R(2)=0.50, n=543). The modified Bland-Altman analysis for repeated measurements showed a bias (precision) of -0.27 (1.06) and -0.02 (1.07) g dl(-1) for the steady-state and dynamic phases, respectively. SpHb accuracy increased when Hb(satlab) was <10 g dl(-1), with a bias (precision) of 0.41 (0.47) vs -0.26 (1.12) g dl(-1) for values >10 g dl(-1), but accuracy decreased after colloid administration (R(2)=0.25). SpHb correlated moderately with Hb(satlab) with a slight underestimation in both phases in patients undergoing major hepatic resection. Accuracy increased for lower Hb(satlab) values but decreased in the presence of colloid solution. Further improvements are necessary to improve device accuracy under these conditions, so that SpHb might become a sensitive screening device for clinically significant anaemia.

75 FR 3193 - Information Collection; Annual Wildfire Summary Report

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-20

... addressed to Tim Melchert, Fire and Aviation Management, National Interagency Fire Center, Forest Service... Forest Service State and Private Forestry Cooperative Fire Program. The program provides supplemental funding for State and local fire fighting agencies. The Forest Service works cooperatively with State and...

Litterfall Production Prior to and during Hurricanes Irma and Maria in Four Puerto Rican Forests

Treesearch

Xianbin Liu; Xiucheng Zeng; Xiaoming Zou; Grizelle González; Chao Wang; Si Yang

2018-01-01

Hurricanes Irma and Maria struck Puerto Rico on the 6th and 20th of September 2017, respectively. These two powerful Cat 5 hurricanes severely defoliated forest canopy and deposited massive amounts of litterfall in the forests across the island. We established a 1-ha research plot in each of four forests (Guánica State Forest, Río Abajo State Forest, Guayama Research...

History of forest survey sampling designs in the United States

Treesearch

W. E. Frayer; George M. Furnival

2000-01-01

Extensive forest inventories of forested lands in the United States were begun in the early part of the 20th century, but widespread, frequent use was not common until after WWII. Throughout the development of inventory techniques and their application to assess the status of the nation's forests, most of the work has been done by the USDA Forest Service through...

Net change in forest density, 1873-2001. Using historical maps to monitor long-term forest trends.

Treesearch

Greg C. Liknes; Mark D. Nelson; Daniel J. Kaisershot

2013-01-01

European settlement of the United States and utilization of forests are inextricably linked. Forest products fueled development, providing the building blocks for railroads, bridges, ships, and homes. Perhaps because of the importance of its forests, the United States has a rich cartographic history documenting its resources. Long-term, broad-scale monitoring efforts...

Forest resources of the United States, 2002: mapping the renewable resource planning act data

Treesearch

Cassandra M. Kurtz; Daniel J. Kaisershot; Dale D. Gormanson; Jeffery S. Wazenegger

2009-01-01

Forest Inventory and Analysis (FIA), a national program of the Forest Service, U.S. Department of Agriculture conducts and maintains comprehensive inventories of the forest resources in the United States. The Forest and Rangeland Renewable Resources Planning Act (RPA) of 1974 mandates a comprehensive assessment of past trends, current status, and the future potential...

Mapping forest vegetation for the western United States using modified random forests imputation of FIA forest plots

Treesearch

Karin Riley; Isaac C. Grenfell; Mark A. Finney

2016-01-01

Maps of the number, size, and species of trees in forests across the western United States are desirable for many applications such as estimating terrestrial carbon resources, predicting tree mortality following wildfires, and for forest inventory. However, detailed mapping of trees for large areas is not feasible with current technologies, but statistical...

Rehabilitation of fire-damaged forest lands in southwestern Maine

Treesearch

A. D. Nutting; James C. Rettie; Wayne G. Banks

1949-01-01

Recognizing that it can ill afford the loss of timber productivity on the large acreage of forest land burned over by the 1947 fires, the state of Maine requested assistance of the Northeastern Forest Experiment Station of the United States Forest Service in a program of research that would aid in the rehabilitation of the burned-over forest land.

Regional Assessment of Remote Forests and Black Bear Habitat from Forest Resource Surveys

Treesearch

Victor A. Rudis; John B. Tansey

1995-01-01

We developed a spatially explicit modeling approach, using a county-scaled remote forest (i.e., forested area reserved from or having no direct human interference) assessment derived from 1984-1990 forest resource inventory data and a 1984 black bear (Ursus americantus) range map for 12 states in the southern United States.We defined minimum suitable and optimal black...

Forest inventory and analysis in the United States: remote sensing and geospatial activities

Treesearch

Mark Nelson; Gretchen Moisen; Mark Finco

2007-01-01

Our Nation's forests provide a wealth of ecological, social, and economic resources. These forest lands cover over 300 million hectares of the United States, or about one third of the total land area. Accurate and timely information about them is essential to their wise management and use. The mission of the Forest Service's Forest Inventory and Analysis (FIA...

Forest Inventory and Analysis in the United States: Remote sensing and geospatial activities

Treesearch

Mark Nelson; Gretchen Moisen; Mark Finco

2007-01-01

Our Nation's forests provide a wealth of ecological, social, and economic resources. These forest lands cover over 300 million hectares of the United States, or about one third of the total land area. Accurate and timely information about them is essential to their wise management and use. The mission of the Forest Service's Forest Inventory and Analysis (FIA...

Understory cover and biomass indices predictions for forest ecosystems of the Northwestern United States

Treesearch

Vasile A. Suchar; Nicholas L. Crookston

2010-01-01

The understory community is a critical component of many processes of forest ecosystems. Cover and biomass indices of shrubs and herbs of forested ecosystems of Northwestern United States are presented. Various forest data were recorded for 10,895 plots during a Current Vegetation Survey, over the National Forest lands of entire Pacific Northwest. No significant...

Bark beetle conditions in western forests and formation of the Western Bark Beetle Research Group

Treesearch

Robert J. Cain; Jane L. Hayes

2009-01-01

The recent dramatic impacts of bark beetle outbreaks across conifer forests of the West have been mapped and reported by entomology and pathology professionals with Forest Health Protection (FHP), a component of USDA Forest Service's State and Private Forestry, and their state counterparts. These forest conditions set the stage for the formation of the Western...

Attributes of down woody materials in hardwood forests of the Eastern United States

Treesearch

Christopher W. Woodall; Sonja N. Oswalt; Randall S. Morin

2007-01-01

The Forest Inventory and Analysis Program (FIA) of the USDA Forest Service conducts a national inventory of down woody materials (DWM) on forestland in the United States. Estimates of DWM for inventory plots occurring in eastern U.S. hardwood forests facilitate large-scale assessment of hardwood forest fuel loadings and wildlife habitat. Therefore, the objectives of...

Dataset of timberland variables used to assess forest conditions in two Southeastern United States' fuelsheds

DOE PAGES

Parish, Esther S.; Dale, Virginia H.; Tobin, Emma; ...

2017-05-27

The data presented in this article are related to the research article entitled “How is wood-based pellet production affecting forest conditions in the southeastern United States?” (Dale et al., 2017). This article describes how United States Forest Service (USFS) Forest Inventory and Analysis (FIA) data from multiple state inventories were aggregated and used to extract ten annual timberland variables for trend analysis in two case study bioenergy fuelshed areas. This dataset is made publically available to enable critical or extended analyses of changes in forest conditions, either for the fuelshed areas supplying the ports of Savannah, Georgia and Chesapeake, Virginia,more » or for other southeastern US forested areas contributing biomass to the export wood pellet industry.« less

Dataset of timberland variables used to assess forest conditions in two Southeastern United States' fuelsheds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parish, Esther S.; Dale, Virginia H.; Tobin, Emma

The data presented in this article are related to the research article entitled “How is wood-based pellet production affecting forest conditions in the southeastern United States?” (Dale et al., 2017). This article describes how United States Forest Service (USFS) Forest Inventory and Analysis (FIA) data from multiple state inventories were aggregated and used to extract ten annual timberland variables for trend analysis in two case study bioenergy fuelshed areas. This dataset is made publically available to enable critical or extended analyses of changes in forest conditions, either for the fuelshed areas supplying the ports of Savannah, Georgia and Chesapeake, Virginia,more » or for other southeastern US forested areas contributing biomass to the export wood pellet industry.« less

Area changes for forest cover types in the United States, 1952 to 1997, with projections to 2050.

Treesearch

Ralph J. Alig; Brett J. Butler

2004-01-01

The United States has a diverse array of forest cover types on its 747 million acres of forest land. Forests in the United States have been shaped by many natural and human-caused forces, including climate, physiography, geology, soils, water, fire, land use changes, timber harvests, and other human interventions. The major purpose of this document is to describe area...

Reaching a forest land per capita milestone in the United States

Treesearch

C.W. Woodall; P.D. Miles

2008-01-01

During April 2007, forest land per capita in the United States dropped below 1 ha. This is the result of a rather static area of forest land in the United States for the past 100 years combined with population growth. The US now joins the ranks of most countries (77%) having forest land per capita below 1 ha. The combination of an increasing human population with...

Influence and effectiveness of financial incentive programs in programs in promoting sustainable forestry in the South

Treesearch

John L. Greene; Thomas J. Straka; Steven E. Daniels; Michael G. Jacobson; Michael A. Kilgore

2009-01-01

Selected state agency foresters in each of the 13 southern states were surveyed about the financial incentive programs available to nonindustrial private forest owners. The foresters were asked to name and describe the public and private programs available in their state, to assess forest owners’ awareness of each program, its appeal among the owners aware of it, its...

36 CFR 228.15 - Operations within National Forest Wilderness.

Code of Federal Regulations, 2013 CFR

2013-07-01

...) The United States mining laws shall extend to each National Forest Wilderness for the period specified...) Holders of unpatented mining claims validly established on any National Forest Wilderness prior to... by the United States mining laws as then applicable to the National Forest land involved. Persons...

36 CFR 228.15 - Operations within National Forest Wilderness.

Code of Federal Regulations, 2012 CFR

2012-07-01

...) The United States mining laws shall extend to each National Forest Wilderness for the period specified...) Holders of unpatented mining claims validly established on any National Forest Wilderness prior to... by the United States mining laws as then applicable to the National Forest land involved. Persons...

36 CFR 228.15 - Operations within National Forest Wilderness.

Code of Federal Regulations, 2011 CFR

2011-07-01

...) The United States mining laws shall extend to each National Forest Wilderness for the period specified...) Holders of unpatented mining claims validly established on any National Forest Wilderness prior to... by the United States mining laws as then applicable to the National Forest land involved. Persons...

Automated Burned Area Delineation Using IRS AWiFS satellite data

NASA Astrophysics Data System (ADS)

Singhal, J.; Kiranchand, T. R.; Rajashekar, G.; Jha, C. S.

2014-12-01

India is endowed with a rich forest cover. Over 21% of country's area is covered by forest of varied composition and structure. Out of 67.5 million ha of Indian forests, about 55% of the forest cover is being subjected to fires each year, causing an economic loss of over 440 crores of rupees apart from other ecological effects. Studies carried out by Forest Survey of India reveals that on an average 53% forest cover of the country is prone to fires and 6.17% of the forests are prone to severe fire damage. Forest Survey of India in a countrywide study in 1995 estimated that about 1.45 million hectares of forest are affected by fire annually. According to Forest Protection Division of the Ministry of Environment and Forest (GOI), 3.73 million ha of forests are affected by fire annually in India. Karnataka is one of the southern states of India extending in between latitude 110 30' and 180 25' and longitudes 740 10' and 780 35'. As per Forest Survey of India's State of Forest Report (SFR) 2009, of the total geographic area of 191791sq.km, the state harbors 38284 sq.km of recorded forest area. Major forest types occurring in the study area are tropical evergreen and semi-evergreen, tropical moist and dry deciduous forests along with tropical scrub and dry grasslands. Typical forest fire season in the study area is from February-May with a peak during March-April every year, though sporadic fire episodes occur in other parts of the year sq.km, the state harbors 38284 sq.km of recorded forest area. Major forest types occurring in the study area are tropical evergreen and semi-evergreen, tropical moist and dry deciduous forests along with tropical scrub and dry grasslands. Significant area of the deciduous forests, scrub and grasslands is prone to recurrent forest fires every year. In this study we evaluate the feasibility of burned area mapping over a large area (Karnataka state, India) using a semi-automated detection algorithm applied to medium resolution multi spectral data from the IRS AWiFS sensor. The method is intended to be used by non-specialist users for diagnostic rapid burnt area mapping.

From State-controlled to Polycentric Governance in Forest Landscape Restoration: The Case of the Ecological Forest Purchase Program in Yong'an Municipality of China.

PubMed

Long, Hexing; Liu, Jinlong; Tu, Chengyue; Fu, Yimin

2018-07-01

Forest landscape restoration is emerging as an effective approach to restore degraded forests for the provision of ecosystem services and to minimize trade-offs between conservation and rural livelihoods. Policy and institutional innovations in China illustrate the governance transformation of forest landscape restoration from state-controlled to polycentric governance. Based on a case study of the Ecological Forest Purchase Program in Yong'an municipality, China's Fujian Province, this paper explores how such forest governance transformation has evolved and how it has shaped the outcomes of forest landscape restoration in terms of multi-dimensionality and actor configurations. Our analysis indicates that accommodating the participation of multiple actors and market-based instruments facilitate a smoother transition from state-centered to polycentric governance in forest landscape restoration. Governance transitions for forest landscape restoration must overcome a number of challenges including ensurance of a formal participation forum, fair participation, and a sustainable legislative and financial system to enhance long-term effectiveness.

Forest composition change in the eastern United States

Treesearch

Songlin Fei; Peilin. Yang

2011-01-01

Forest ecosystems in the eastern United States are believed to be experiencing a species composition change, but most evidence is anecdotal or localized. We used U.S. Forest Service Forest Inventory and Analysis data to quantify the annual changes of three common genera: Acer (maple), carya (hickory), and Quercus...

Value of the Morgan-Monroe-Yellowwood State Forest Complex

Treesearch

William L. Hoover

2013-01-01

As publicly owned forest land, the Morgan-Monroe and Yellowwood State Forests (Indiana), referred to herein as the Morgan-Monroe Yellowwood Complex (MMYC), have many stakeholders with differing management expectations. The Hardwood Ecosystem Experiment (HEE) within the MMYC will significantly increase the science-based information available for forest management...

Forests of Tennessee, 2013

Treesearch

Christopher Oswalt

2016-01-01

This resource update provides an overview of forest resource attributes for the State of Tennessee based on an annual inventory conducted by the Forest Inventory and Analysis (FIA) Program at the Southern Research Station of the Forest Service, United States Department of Agriculture in cooperation with the Tennessee Department of Agriculture Division of Forestry....

Forests of Tennessee, 2012

Treesearch

C.M. Oswalt; C.R. King

2014-01-01

This resource update provides an overview of forest resource attributes for the State of Tennessee based on an annual inventory conducted by the Forest Inventory and Analysis (FIA) Program at the Southern Research Station of the United States Department of Agriculture Forest Service in cooperation with the Tennessee Department of Agriculture Division of Forestry. These...

Psychromicrobium silvestre gen. nov., sp. nov., an actinobacterium isolated from alpine forest soils.

PubMed

Schumann, Peter; Zhang, De-Chao; França, Luís; Albuquerque, Luciana; da Costa, Milton S; Margesin, Rosa

2017-03-01

Two Gram-stain-variable, non-motile, catalase-positive and cytochrome c oxidase-negative bacteria, designated AK20-18 T and AM20-54, were isolated from forest soil samples collected in the Italian Alps. Growth occurred at a temperature range of 5-30 °C, at pH 6-9 and in the presence of 0-5 % (w/v) NaCl. The 16S rRNA gene sequence similarity between strains AK20-18 T and AM20-54 was 100 %. Phylogenetic analysis based on 16S rRNA gene sequence showed that strain AK20-18 T had highest 16S rRNA gene sequence similarity with the type strain of Arthrobacter psychrochitiniphilus (96.9 %). The cell-wall peptidoglycan structure of strain AK20-18 T was of the type A3alpha l-Lys-l-Thr-l-Ala2 (A11.27). The whole-cell sugars were galactose, ribose and lesser amounts of mannose. The major respiratory quinone of the two strains was menaquinone 9(H2) [MK-9(H2)], whereas MK-10(H2) was a minor component. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and unknown glycolipids. The major cellular fatty acids were anteiso-C15 : 0, iso-C15 : 0, iso-C16 : 0 and anteiso-C17 : 0. The genomic DNA G+C content was 59.9 mol%. Combined data of phylogenetic, phenotypic and chemotaxonomic analyses demonstrated that strains AK20-18 T and AM20-54 represent a novel genus and species, for which the name Psychromicrobium silvestre gen. nov., sp. nov. is proposed. The type strain of Psychromicrobium silvestregen. nov., sp. nov. is AK20-18 T (=DSM 102047 T =LMG 29369 T ).

Feeding preference of the shredder Phylloicus sp. for plant leaves of Chrysophyllum oliviforme or Miconia chartacea after conditioning in streams from different biomes.

PubMed

Reis, D F; Machado, M M D; Coutinho, N P; Rangel, J V; Moretti, M S; Morais, P B

2018-04-23

Macroinvertebrate shredders consume preferably leaves conditioned by fungi and bacteria which offer greater palatability to them. Plant species in Cerrado present high concentration of chemical elements such as lignin and cellulose, phenols and tanins thus making them less attractive for shredders consumption and limiting the palatability. This study aimed to evaluate the feeding preference of a macroinvertebrate shredder of the genus Phylloicus for plant material from two different biomes (Cerrado and Mata Atlântica), after conditioning in a stream of Mata Atlântica and observing their physical and chemical characteristics. Senescent leaves were collected, monthly from the litterfall of riparian vegetation in a 500 m stretch of a stream in each biome from August 2014 to January 201. The most abundant species in each stream was selected for the experiment. The experimental design consisted in with two treatments. The first (T1) comprised leaf discs from Chrysophyllum oliviforme (Cerrado species) together with leaf discs of Miconia chartacea (Atlantic Forest species) which were conditioned in the Atlantic Forest stream. The second treatment (T2) involved leaf discs of Miconia chartacea conditioned in Mata Altlântica and Cerrado streams. Both tests had showed significant differences between the two treatments (T1 and T2). For T1, there was consumption of M. chartacea leaf discs by Phylloicus sp., but there was no consumption of C. oliviforme discs. For T2, there was preference for M. chartaceae leaves conditioned in a stream of Mata Atlântica than in Cerrado stream. The results showed that Phylloicus sp., had presented preference for food detritus of the Mata Antlântica biome and rejection to the one from Cerrado biome.

Forest Resources of the United States, 2012: a technical document supporting the Forest Service 2010 update of the RPA Assessment

Treesearch

Sonja N. Oswalt; W. Brad Smith; Patrick D. Miles; Scott A. Pugh

2014-01-01

Forest resource statistics from the 2010 Resources Planning Act (RPA) Assessment were updated to provide current information on the Nation's forests as a baseline for the 2015 national assessment. Resource tables present estimates of forest area, volume, mortality, growth, removals, and timber products output in various ways, such as by ownership, region, or State...

The distribution of mercury in a forest floor transect across the central United States

Treesearch

Charles H. (Hobie) Perry; Michael C. Amacher; William Cannon; Randall K. Kolka; Laurel Woodruff

2009-01-01

Mercury (Hg) stored in soil organic matter may be released when the forest floor is consumed by fire. Our objective is to document the spatial distribution of forest floor Hg for a transect crossing the central United States. Samples collected by the Forest Service, U.S. Department of Agriculture's Forest Inventory and Analysis Soil Quality Indicator were tested...

Status of oak seedlings and saplings in the northern United States: implications for sustainability of oak forests

Treesearch

Chris W. Woodall; Randall S. Morin; Jim R. Steinman; Charles H. Perry

2008-01-01

Oak species are a substantial component of forest ecosystems in a 24-state region spanning the northern U.S. During recent decades, it has been documented that the health of oak forests has been experiencing large-scale decline. To further evaluate the sustainability of oak forests in nearly half the states of the U.S., the current status of oak seedlings and saplings...

The national picture of nonnative plants in the United States according to FIA data

Treesearch

Sonja N. Oswalt; Christopher M. Oswalt

2012-01-01

Data collected by the U.S. Forest Service Forest Inventory and Analysis Program was assembled from each region of the United States. Occurrence, measured as the percentage of forested subplots within a county with observed nonnative invasive plant (NNIP) species, was calculated across the continental United States and Hawaii. Each region, and in some cases each state,...

Global context for the United States Forest Sector in 2030

Treesearch

James Turner; Joseph Buongiorno; Shushuai Zhu; Jeffrey P. Prestemon

2005-01-01

The purpose of this study was to identify markets for, and competitors to, the United States forest industries in the next 30 years. The Global Forest Products Model was used to make predictions of international demand, supply, trade, and prices, conditional on the last RPA Timber Assessment projections for the United States. It was found that the United States, Japan...

Alaska forest products: using resources well.

Treesearch

Valerie Rapp

2003-01-01

Despite abundant forest resources in the state, the Alaska forest products industry declined throughout the 1990s and early 21st century. In a state with lots of trees, mills are going out of business and most finished lumber used in the state is imported from the lower 48 United States and Canada. The Alaska Wood Utilization Research and Development Center (Wood...

Paenibacillus guangzhouensis sp. nov., an Fe(III)- and humus-reducing bacterium from a forest soil.

PubMed

Li, Jibing; Lu, Qin; Liu, Ting; Zhou, Shungui; Yang, Guiqin; Zhao, Yong

2014-11-01

A Gram-reaction-variable, rod-shaped, motile, facultatively aerobic and endospore-forming bacterium, designated strain GSS02(T), was isolated from a forest soil. Strain GSS02(T) was capable of reducing humic substances and Fe(III) oxides. Strain GSS02(T) grew optimally at 35 °C, at pH 78 and in the presence of 1% NaCl. The predominant menaquinone was MK-7. The major cellular fatty acids were anteiso-C(15:0) and iso-C(16:0) and the polar lipid profile contained mainly phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol, with moderate amounts of two unknown aminophospholipids and a minor amount of one unknown lipid. The DNA G+C content was 53.4 mol%. Comparative 16S rRNA gene sequence analysis showed that strain GSS02(T) was related most closely to Paenibacillus terrigena JCM 21741(T) (98.1% similarity). Mean DNA-DNA relatedness between strain GSS02(T) and P. terrigena JCM 21741(T) was 58.8 ± 0.5%. The phylogenetic, chemotaxonomic and phenotypic results clearly demonstrated that strain GSS02(T) belongs to the genus Paenibacillus and represents a novel species, for which the name Paenibacillus guangzhouensis sp. nov. is proposed. The type strain is GSS02(T) ( =KCTC 33171(T) =CCTCC AB 2013236(T)). © 2014 IUMS.

Diversity of Forest Litter-Inhabiting Ants Along Elevations in the Wayanad Region of the Western Ghats

PubMed Central

Sabu, Thomas K.; Vineesh, P. J.; Vinod, K.V.

2008-01-01

Litter ant diversity and abundance in relation to biotic and abiotic factors were analyzed at five primary forest sites lying between 300 to 1650 meter above mean sea level in the Wayanad region of the Western Ghats in Kerala, southern India. Ant abundance and species richness peaked at mid-elevations influenced by the presence of favourable physical conditions and abundance of prey resources. Dominance of ants preferring termites and Collembola as prey at sites rich in their specific prey resources indicate the influence of local prey resource availability in determining ant distribution. Dominant species (Tapinoma sp. and Solenopsis sp.) had wider distributions, being present at all elevations. Physical factors (slope of the terrain, rainfall, moisture, humidity, temperature) and prey resource availability (insect larvae, termites, Collembola) influenced ant species abundance at a regional scale, whereas at local scales, site specific variations in the relationship between abundance of ants and prey-predators and physical factors were recorded. The present study highlights the need to consider site-specific abiotic and biotic factors while examining the distribution patterns of litter ants along altitudinal gradients in other regions of the Western Ghats, which is a recognised hot spot of biodiversity with wide regional variation in vegetation types and faunal distribution patterns.

Plant community influences on soil microfungal assemblages in boreal mixed-wood forests.

PubMed

De Bellis, T; Kernaghan, G; Widden, P

2007-01-01

We studied the relationships between assemblages of soil microfungi and plant communities in the southern boreal mixed-wood forests of Quebec. Sampling took place in 18,100 m2 plots from an existing research site. Plots were separated into three categories based on dominant overstory tree species: (i) trembling aspen, (ii) white birch and (iii) a mixture of white spruce and balsam fir. Within each plot a 1 m2 subplot was established in which the understory herbaceous layer was surveyed and soil cores were collected. Microfungi were isolated from soil cores with the soil-washing technique and isolates were identified morphologically. To support our morphological identifications DNA sequences were obtained for the most abundant microfungi. The most frequently occurring microfungal species were Penicillium thomii, P. spinulosum, P. janthinellum, Penicillium sp., P. melinii, Trichoderma polysporum, T. viride, T. hamatum, Mortierella ramanniana, Geomyces pannorum, Cylindrocarpon didymum, Mortierella sp. and Mucor hiemalis. Multivariate analyses (redundancy analysis followed by variance partitioning) revealed that most of the variation in microfungal communities was explained by understory plant species composition as opposed to soil chemistry or overstory tree species. In this floristically diverse system saprophytic microfungal assemblages were not correlated with the overstory tree species but were significantly correlated with the main understory herbs, thereby reflecting differences at a smaller spatial scale.

Two new species and a new combination in Protium (Burseraceae) from Costa Rica

PubMed Central

Santamaría-Aguilar, Daniel; Lagomarsino, Laura P.

2017-01-01

Abstract Two new species of Protium (Burseraceae) are described and illustrated: Protium aguilarii sp. nov., from the Pacific slope of the Osa Peninsula, Puntarenas Province, Costa Rica; and Protium hammelii sp. nov., from wet forests on the Caribbean slopes of Nicaragua and Costa Rica. In addition, Protium brenesii comb. nov., is proposed as a new combination based on Trichilia brenesii, a name that was based on a specimen collected with flowers in the mountains near San Ramón, Alajuela Province, Costa Rica. It is compared with Protium costaricense, a similar species with which it has been confused for more than 90 years. Finally, illustrations and specimen citations are provided for all the aforementioned taxa, and some others with which they have been confused. PMID:28228688

Two new species and a new combination in Protium (Burseraceae) from Costa Rica.

PubMed

Santamaría-Aguilar, Daniel; Lagomarsino, Laura P

2017-01-01

Two new species of Protium (Burseraceae) are described and illustrated: Protium aguilarii sp. nov. , from the Pacific slope of the Osa Peninsula, Puntarenas Province, Costa Rica; and Protium hammelii sp. nov. , from wet forests on the Caribbean slopes of Nicaragua and Costa Rica. In addition, Protium brenesii comb. nov. , is proposed as a new combination based on Trichilia brenesii , a name that was based on a specimen collected with flowers in the mountains near San Ramón, Alajuela Province, Costa Rica. It is compared with Protium costaricense , a similar species with which it has been confused for more than 90 years. Finally, illustrations and specimen citations are provided for all the aforementioned taxa, and some others with which they have been confused.

New species and records of Perlidae (Plecoptera) from Espírito Santo State, Brazil.

PubMed

Gonçalves, Maísa DE Carvalho; Novaes, Marcos Carneiro; Salles, Frederico Falcão

2017-06-01

Two new species of the perlid genus Anacroneuria, A. rotunda n. sp and A. pitii n. sp are described from Espírito Santo State, Brazil. Additionally, six species of Anacroneuria and four species of Kempnyia are reported for the first time from Espírito Santo State. Records are also provided for A. debilis, A. subcostalis, K. flava, K. gracilenta, and K. neotropica. An undetermined species of Macrogynoplax based on nymphs is also reported from Espírito Santo State.

Amplicon restriction patterns associated with nitrogenase activity of root nodules for selection of superior Myrica seedlings.

PubMed

Yanthan, Mhathung; Misra, Arvind K

2013-11-01

Trees of Myrica sp. grow abundantly in the forests of Meghalaya, India. These trees are actinorhizal and harbour nitrogen-fixing Frankia in their root nodules and contribute positively towards the enhancement of nitrogen status of forest areas. They can be used in rejuvenation of mine spoils and nitrogen-depleted fallow lands generated due to slash and burn agriculture practiced in the area. We have studied the association of amplicon restriction patterns (ARPs) of Myrica ribosomal RNA gene and internal transcribed spacer (ITS) region and nitrogenase activity of its root nodules. We found that ARPs thus obtained could be used as markers for early screening of seedlings that could support strains of Frankia that fix atmospheric nitrogen more efficiently.

Autofluorescence study and selected cyanidin quantification in the Jewel orchids Anoectochilus sp. and Ludisia discolor.

PubMed

Poobathy, Ranjetta; Zakaria, Rahmad; Murugaiyah, Vikneswaran; Subramaniam, Sreeramanan

2018-01-01

Anoectochilus sp. and Ludisia discolor are known as Jewel orchids. Both species are terrestrial wild orchids that grow in shaded areas of forests. The Jewel orchids are renowned for the beauty of their leaves, which are dark-green laced with silvery or golden veins. The orchids are used as a cure in various parts of Asia. Overharvesting and anthropogenic disturbances threaten the existence of the Jewel orchids in the wild, necessitating human intervention in their survival. An understanding of the structure and adaptations of a plant may assist in its survival when propagated outside of its habitat. In this study, ex vitro leaves of Anoectochilus sp. and L. discolor were subjected to freehand sectioning, and then inspected through brightfield and fluorescence microscopy. The study indicated that all parts of both plants presented typical monocotyledonous characteristics except the leaves. The leaves displayed dorsiventrality with distinct palisade and spongy mesophyll layers. The spongy mesophyll layer contained cells which fluoresced a bright red when exposed to ultraviolet, blue, and green light wavelengths, hinting at the presence of anthocyanins for photoprotection. Cyanidin was detected in the leaves of L. discolor, as enumerated through high performance liquid chromatography (HPLC). The observations indicated that Anoectochilus sp. and L. discolor are well-adapted to live under shaded conditions with minimal exposure to light.

Description and SEM Observations of Meloidogyne sasseri n. sp. (Nematoda: Meloidogynidae), Parasitizing Beachgrasses

PubMed Central

Handoo, Zafar A.; Huettel, Robin N.; Golden, A. Morgan

1993-01-01

Meloidogyne sasseri n. sp. is described and illustrated from American beachgrass (Ammophila breviliffulata) originally collected from Henlopen State Park and Fenwick Island near the Maryland state line in Delaware, United States (6). Its relationship to M. graminis, M. spartinae, and M. californiensis is discussed. Primary distinctive characters of the female perineal pattern were a high to rounded arch with shoulders, widely spaced lateral lines interrupting transverse striations, a sunken vulva and anus, and coarse broken striae around the anal area. Second-stage juvenile body length was 554 μm (470-550), stylet length 14 μm (13-14.5), tail length 93 μm (83-115), tapering to a finely rounded terminus. Male stylet length 20 μm (19-21.5), spicule length 33 μm (30-36). Scanning electron microscope observations provided additional details of perineal patterns and face views of the female, male, and J2 head. Wheat, rice, oat, Ammophila sp., Panicum sp., bermudagrass, zoysiagrass and St. Augustinegrass were tested as hosts. Distribution of the species was the coasts of Delaware and Maryland. The common name "beachgrass root-knot" is proposed for M. sasseri n. sp. PMID:19279820

Forest cutting and impacts on carbon in the eastern United States

USGS Publications Warehouse

Zhou, Decheng; Liu, Shuguang; Oeding, Jennifer; Zhao, Shuqing

2013-01-01

Forest cutting is a major anthropogenic disturbance that affects forest carbon (C) storage and fluxes. Yet its characteristics and impacts on C cycling are poorly understood over large areas. Using recent annualized forest inventory data, we estimated cutting-related loss of live biomass in the eastern United States was 168 Tg C yr−1 from 2002 to 2010 (with C loss per unit forest area of 1.07 Mg ha−1 yr−1), which is equivalent to 70% of the total U.S. forest C sink or 11% of the national annual CO2 emissions from fossil-fuel combustion over the same period. We further revealed that specific cutting-related C loss varied with cutting intensities, forest types, stand ages, and geographic locations. Our results provide new insights to the characteristics of forest harvesting activities in the eastern United States and highlight the significance of partial cutting to regional and national carbon budgets.

Nursery Diseases of Western Conifers

Treesearch

Jerry W. Riffle; Richard S. Jr. Smith

1979-01-01

Forest tree nurseries in the Western United States, the region immediately west of the Great Plains, currently produce over 250 million trees per year. Recent Federal legislation requires the Forest Service to increase its efforts in reforestation of nonstocked forest land, and some States now require owners of forest land to provide for reforestation immediately...

An assessment of multiflora rose in northern U.S. forests

Treesearch

Cassandra M. Kurtz; Mark H. Hansen

2013-01-01

This publication provides an overview of multiflora rose (Rosa multiflora) on forest land across the 24 states of the midwestern and northeastern United States based on an extensive systematic network of plots measured by the Forest Inventory and Analysis (FIA) program of the U.S. Forest Service, Northern Research Station (NRS).

Tennessee, 2011-forest inventory and analysis factsheet

Treesearch

Christopher M. Oswalt

2013-01-01

This science update provides an overview of forest resource attributes for the State of Tennessee based on an annual inventory conducted by the Forest Inventory and Analysis (FIA) Program at the Southern Research Station of the United States Department of Agriculture Forest Service in cooperation with the Tennessee Department of Agriculture Division of Forestry. These...

Historical Accumulation of Nonindigenous Forest Pests in the Continental United States

Treesearch

J.E. Aukema; D.G. McCullough; B.V. Holle; A.M. Liebhold; S.J. Frankel

2010-01-01

Nonindigenous forest insects and pathogens affect a range of ecosystems, industries, and property owners in the United States. Evaluating temporal patterns in the accumulation of these nonindigenous forest pests can inform regulatory and policy decisions. We compiled a comprehensive species list to assess the accumulation rates of nonindigenous forest insects and...

Maine's annual inventory: state perspectives

Treesearch

Kenneth M. Laustsen

2000-01-01

In 1999, Maine became the first northeastern state to begin implementing the USDA Forest Service's annual inventory system as directed by PL 105- 185, the Agricultural Research, Extension, and Education Reform Act of 1998. The Maine Forest Service, in collaboration with Forest Inventory and Analysis program of the Northeastern Research Station of the USDA Forest...

Forests of the Mountain State

Treesearch

Richard H. Widmann; Charles R. Dye; Gregory W. Cook

2007-01-01

A report on the forest inventory of West Virginia conducted in 1999-2001 by the Forest Inventory and Analysis unit of the Northeastern Research Station. Discusses the current condition and changes from previous inventories for forest area, timber volume, tree species, mortality and growth and removals. Graphics depict data at the state level and by county where...

Conservation assessments for five forest bat species in the Eastern United States

Treesearch

Frank R., III Thompson

2006-01-01

Assesses the status, distribution, conservation, and management considerations for five Regional Forester Sensitive Species of forest bats on national forests in the Eastern United States: eastern pipistrelle, evening bat, southeastern myotis, eastern small-footed myotis, and northern long-eared bat. Includes information on the taxonomy, description, life history,...

Historical accumulation of nonindigenous forest pests in the Continental United States

Treesearch

J.E. Aukema; D.G. McCullough; B. Von Holle; Andrew Liebhold; Kerry Britton; S.J. Frankel

2010-01-01

Nonindigenous forest insects and pathogens affect a range of ecosystems, industries, and property owners in the United States. Evaluating temporal patterns in the accumulation of these nonindigenous forest pests can inform regulatory and policy decisions. We compiled a comprehensive species list to assess the accumulation rates of nonindigenous forest insects and...

Assessment and Mapping of Forest Parcel Sizes

Treesearch

Brett J. Butler; Susan L. King

2005-01-01

A method for analyzing and mapping forest parcel sizes in the Northeastern United States is presented. A decision tree model was created that predicts forest parcel size from spatially explicit predictor variables: population density, State, percentage forest land cover, and road density. The model correctly predicted parcel size for 60 percent of the observations in a...

Wisconsin State Forests Continuous Forest Inventory: A look at the first year

Treesearch

Randall S. Morin; Teague Prichard; Vern Everson; Jim Westfall; Charles Scott

2009-01-01

The demand for timely, consistent, and reliable forest inventory and monitoring information for Wisconsin's state forests has increased significantly. A wide range of publics and partners, including businesses, organizations, and citizens alike are well aware of the benefits of sustainable forestry and are working together to increase knowledge through an annual...

Forest Resources of the United States, 1997

Treesearch

W. Brad Smith; John S. Vissage; David R. Darr; Raymond M. Sheffield

2001-01-01

Forest resource statistics from the 1987 Resources Planning Act (RPA) Assessment were updated to 1997 to provide current information on the Nation`s forests. Resource tables present estimates of forest area, volume, mortality, growth, removals, and timber products output in various ways, such as by ownership, region, or State. Current resource data are analyzed and...

Development of state and transition model assumptions used in National Forest Plan revision

Treesearch

Eric B. Henderson

2008-01-01

State and transition models are being utilized in forest management analysis processes to evaluate assumptions about disturbances and succession. These models assume valid information about seral class successional pathways and timing. The Forest Vegetation Simulator (FVS) was used to evaluate seral class succession assumptions for the Hiawatha National Forest in...

Forest Resources of the United States, 2007

Treesearch

W. Brad, tech. coord. Smith; Patrick D., data coord. Miles; Charles H., map coord. Perry; Scott A., Data CD coord. Pugh

2009-01-01

Forest resource statistics from the 2000 Resources Planning Act (RPA) Assessment were updated to provide current information on the Nation's forests. Resource tables present estimates of forest area, volume, mortality, growth, removals, and timber products output in various ways, such as by ownership, region, or State. Current resource data and trends are analyzed...

Anomalous dismeter distribution shifts estimated from FIA inventories through time

Treesearch

Francis A. Roesch; Paul C. Van Deusen

2010-01-01

In the past decade, the United States Department of Agriculture Forest Service’s Forest Inventory and Analysis Program (FIA) has replaced regionally autonomous, periodic, state-wide forest inventories using various probability proportional to tree size sampling designs with a nationally consistent annual forest inventory design utilizing systematically spaced clusters...

Forests of the Garden State

Treesearch

Richard H. Widmann

2005-01-01

A report on the fourth forest inventory of New Jersey conducted in 1998-99 by the Forest Inventory and Analysis unit of the Northeastern Research Station. Discusses the current condition and changes from previous inventories for forest area, timber volume, tree species, and growth and removals. Graphics depict data at the state level and by county where appropriate...

Tennessee, 2008 forest inventory and analysis factsheet

Treesearch

Christopher Oswalt; Christopher King

2011-01-01

This publication provides an overview of forest resource attributes for the State of Tennessee based on an annual inventory conducted by the Forest Inventory and Analysis (FIA) Program at the Southern Research Station of the United States Department of Agriculture Forest Service in cooperation with the Tennessee Department of Agriculture Division of Forestry. These...

Indicators of regenerative capacity for eastern hardwood forests

Treesearch

William H. McWilliams; Todd W. Bowersox; Patrick H. Brose; Daniel A. Devlin; James C. Finley; Steve Horsley; Kurt W. Gottschalk; Tonya W. Lister; Larry H. McCormick; Gary W. Miller; Kim C. Steiner; Susan L. Stout; James A. Westfall; Robert L. White

2004-01-01

Hardwood forests of the eastern United States are characterized by a complex mix of species associations that make it difficult to construct useful indicators of long-term sustainability, in terms of future forest composition and stocking levels. The Pennsylvania Regeneration Study examines regeneration adequacy in the state. The study uses the Forest Service's...

A Snapshot of the Northeastern Forests

Treesearch

USDA Forest Service, Northeastern Area

2005-01-01

This publication offers an overview of the northeastern forests and some of the major challenges and opportunities for sustaining them, as identified by the Northeastern Area State and Private Forestry and the Northeastern Area Association of State Foresters. Our goal is to raise awareness of the condition of the forests as a starting point for landowner discussions...

Monitoring U.S. forest dynamics with Landsat [Chapter 12

Treesearch

Jeffrey G. Masek; Sean P. Healey

2012-01-01

Forest dynamics in the United States differ substantially from those in the developing world and thus present unique monitoring requirements. While deforestation and conversion to semipermanent agriculture dominate tropical forest dynamics, the area of forest land in the United States has remained fairly constant for the last 50-60 years (Birdsey and Lewis 2003)....

Relief influence on the spatial distribution of the Atlantic Forest cover on the Ibiúna Plateau, SP.

PubMed

Silva, W G; Metzger, J P; Simões, S; Simonetti, C

2007-08-01

Several studies suggest that, on a large scale, relief conditions influence the Atlantic Forest cover. The aim of this work was to explore these relationships on a local scale, in Caucaia do Alto, on the Ibiúna Plateau. Within an area of about 78 km(2), the distribution of forest cover, divided into two successional stages, was associated with relief attribute data (slope, slope orientation and altitude). The mapping of the vegetation was based on the interpretation of stereoscopic pairs of aerial photographs, from April 2000, on a scale of 1:10,000, while the relief attributes were obtained by geoprocessing from digitalized topographic maps on a scale of 1:10,000. Statistical analyses, based on qui-square tests, revealed that there was a more extensive forest cover, irrespective of the successional stage, in steeper areas (>10 degrees) located at higher altitudes (>923 m), but no influence of the slope orientation. There was no sign of direct influence of relief on the forest cover through environmental gradients that might have contributed to the forest regeneration. Likewise, there was no evidence that these results could have been influenced by the distance from roads or urban areas or with respect to permanent preservation areas. Relief seems to influence the forest cover indirectly, since agricultural land use is preferably made in flatter and lower areas. These results suggest a general distribution pattern of the forest remnants, independent of the scale of study, on which relief indirectly has a strong influence, since it determines human occupation.

Populational equilibrium through exosome-mediated Wnt signaling in tumor progression of diffuse large B-cell lymphoma.

PubMed

Koch, Raphael; Demant, Martin; Aung, Thiha; Diering, Nina; Cicholas, Anna; Chapuy, Bjoern; Wenzel, Dirk; Lahmann, Marlen; Güntsch, Annemarie; Kiecke, Christina; Becker, Sabrina; Hupfeld, Timo; Venkataramani, Vivek; Ziepert, Marita; Opitz, Lennart; Klapper, Wolfram; Trümper, Lorenz; Wulf, Gerald G

2014-04-03

Tumors are composed of phenotypically heterogeneous cell populations. The nongenomic mechanisms underlying transitions and interactions between cell populations are largely unknown. Here, we show that diffuse large B-cell lymphomas possess a self-organized infrastructure comprising side population (SP) and non-SP cells, where transitions between clonogenic states are modulated by exosome-mediated Wnt signaling. DNA methylation modulated SP-non-SP transitions and was correlated with the reciprocal expressions of Wnt signaling pathway agonist Wnt3a in SP cells and the antagonist secreted frizzled-related protein 4 in non-SP cells. Lymphoma SP cells exhibited autonomous clonogenicity and exported Wnt3a via exosomes to neighboring cells, thus modulating population equilibrium in the tumor.

Scaling-up the use of sulfadoxine-pyrimethamine for the preventive treatment of malaria in pregnancy: results and lessons on scalability, costs and programme impact from three local government areas in Sokoto State, Nigeria.

PubMed

Orobaton, Nosa; Austin, Anne M; Abegunde, Dele; Ibrahim, Mohammed; Mohammed, Zainab; Abdul-Azeez, Jumare; Ganiyu, Hakeem; Nanbol, Zwalle; Fapohunda, Bolaji; Beal, Katherine

2016-11-04

Intermittent preventive treatment of malaria in pregnancy with 3+ doses of sulfadoxine-pyrimethamine (IPTp-SP) reduces maternal mortality and stillbirths in malaria endemic areas. Between December 2014 and December 2015, a project to scale up IPTp-SP to all pregnant women was implemented in three local government areas (LGA) of Sokoto State, Nigeria. The intervention included community education and mobilization, household distribution of SP, and community health information systems that reminded mothers of upcoming SP doses. Health facility IPTp-SP distribution continued in three intervention (population 661,606) and one counterfactual (population 167,971) LGAs. During the project lifespan, 31,493 pregnant women were eligible for at least one dose of IPTp-SP. Community and facility data on IPTp-SP distribution were collected in all four LGAs. Data from a subset of 9427 pregnant women, who were followed through 42 days postpartum, were analysed to assess associations between SP dosages and newborn status. Nominal cost and expense data in 2015 Nigerian Naira were obtained from expenditure records on the distribution of SP. Eighty-two percent (n = 25,841) of eligible women received one or more doses of IPTp-SP. The SP1 coverage was 95% in the intervention LGAs; 26% in the counterfactual. Measurable SP3+ coverage was 45% in the intervention and 0% in the counterfactual LGAs. The mean number of SP doses in the intervention LGAs was 2.1; 0.4 in the counterfactual. Increased doses of IPTp-SP were associated with linear increases in newborn head circumference and lower odds of stillbirth. Any antenatal care utilization predicted larger newborn head circumference and lower odds of stillbirth. The cost of delivering three doses of SP, inclusive of the cost of medicines, was US$0.93-$1.20. It is feasible, safe, and affordable to scale up the delivery of high impact IPTp-SP interventions in low resource malaria endemic settings, where few women access facility-based maternal health services. ClinicalTrials.gov Identifier NCT02758353. Registered 29 April 2016, retrospectively registered.

Specificity protein 1 (Sp1) maintains basal epithelial expression of the miR-200 family: implications for epithelial-mesenchymal transition.

PubMed

Kolesnikoff, Natasha; Attema, Joanne L; Roslan, Suraya; Bert, Andrew G; Schwarz, Quenten P; Gregory, Philip A; Goodall, Gregory J

2014-04-18

Epithelial-mesenchymal transition (EMT) is required for the specification of tissues during embryonic development and is recapitulated during the metastatic progression of tumors. The miR-200 family plays a critical role in enforcing the epithelial state with their expression lost in cells undergoing EMT. EMT can be mediated by activation of the ZEB1 and ZEB2 (ZEB) transcription factors, which repress miR-200 expression via a self-reinforcing double negative feedback loop to promote the mesenchymal state. However, it remains unclear what factors drive and maintain epithelial-specific expression of miR-200 in the absence of EMT-inducing factors. Here, we show that the transcription factor Specificity Protein 1 (Sp1) binds to the miR-200b∼200a∼429 proximal promoter and activates miR-200 expression in epithelial cells. In mesenchymal cells, Sp1 expression is maintained, but its ability to activate the miR-200 promoter is perturbed by ZEB-mediated repression. Reduction of Sp1 expression caused changes in EMT-associated markers in epithelial cells. Furthermore, we observed co-expression of Sp1 and miR-200 during mouse embryonic development wherein miR-200 expression was only lost in regions with high ZEB expression. Together, these findings indicate that miR-200 family members require Sp1 to drive basal expression and to maintain an epithelial state.

Tennessee's forest land area was stable 1999-2005 but early successional forest area declined

Treesearch

Christopher M. Oswalt

2008-01-01

A new analysis of the most recent (2005) annualized moving average data for Tennessee indicates that the area of forest land in the State remained stable between 1999 and 2005. Although trends in forest land area vary from region to region within the State, Tennessee neither lost nor gained forest land between 1999 and 2005. However, Tennessee had more than 2.5 times...

Estimation of merchantable bole volume and biomass above sawlog top in the National Forest inventory of the United States

Treesearch

Grant M. Domke; Christopher M. Oswalt; Christopher W. Woodall; Jeffery A. Turner

2013-01-01

Emerging markets for small-diameter roundwood along with a renewed interest in forest biomass for energy have created a need for estimates of merchantable biomass above the minimum sawlog top diameter for timber species in the national forest inventory of the United States. The Forest Inventory and Analysis (FIA) program of the USDA Forest Service recently adopted the...

The Federal Forest Stewardship Program and its implications for sustainable forestry on private forest ownerships in the United States

Treesearch

Robert J. Moulton; J. Dixon Esseks

2002-01-01

A 72 percent response rate was achieved in 1998 and 1999 national survey of 1,238 participants in the USDA Forest Service's Forest Stewardship Program, under which 130,000 individual multiple resource plans encompassing 16.5 million acres (6.5 million ha) of privately owned forest lands in the United States had been completed. Objectives were to determine if the...

Values and motivations of private forest owners in the United States: a framework based on open-ended responses in the national woodland owner survey

Treesearch

David N. Bengston; Brett J. Butler; Stanley T. Asah

2009-01-01

The National Woodland Owner Survey (NWOS) is a recurring and comprehensive national survey of private forest landowners in the United States, and is a social complement to the U.S. Forest Service Forest Inventory and Analysis program's biologic resource inventory. An open-ended question in the NWOS explores private forest owners' motivations and values...

Regional and forest-level estimates of carbon stored in harvested wood products from the United States Forest Service Northern Region, 1906-2010

Treesearch

N. Anderson; J. Young; K. Stockmann; K. Skog; S. Healey; D. Loeffler; J.G. Jones; J. Morrison

2013-01-01

Global forests capture and store significant amounts of CO2 through photosynthesis. When carbon is removed from forests through harvest, a portion of the harvested carbon is stored in wood products, often for many decades. The United States Forest Service (USFS) and other agencies are interested in accurately accounting for carbon flux associated with harvested wood...

Patterns of forest land owner participation in the West Virginia forest stewardship program

Treesearch

B. M. Jennings; D. J. Magill; D. W. Magill; J. Warren

2003-01-01

West Virginia is the Nation's third most forested State in terms of percent forest cover with at least 80 percent of its land forested. Despite this wealth of timber, in the late 19th and early 20th century the State was almost completely cut over with 30 billion board feet being harvested between 1870 and 1920. Currently, there are numerous second growth stands...

Advancement of tree species across ecotonal borders into non-forested ecosystems

NASA Astrophysics Data System (ADS)

Hanberry, Brice B.; Hansen, Mark H.

2015-10-01

Woody species are increasing in density, causing transition to more densely wooded vegetation states, and encroaching across ecotonal borders into non-forested ecosystems. We examined USDA Forest Service Forest Inventory and Analysis data to identify tree species that have expanded longitudinally in range, particularly into the central United States. We analyzed compositional differences within ecological regions (i.e., subsections) in eastern and western ranges of species using repeated measures ANOVA. We considered differences in outer ranges to indicate range expansion or contraction. We also estimated the shift in forest area and basal area relative to the center of the US and compared change in deciduous forest land cover. Out of 80 candidate species, 22 species expanded to the west, seven species expanded to the east, and five species expanded in both directions. During the survey interval, eastern tree species advanced into the predominantly non-forested ecosystems of central United States. Eastern cottonwood, eastern hophornbeam, eastern redbud, honeylocust, Osage-orange, pecan, red mulberry, and Shumard oak represent some of the species that are advancing eastern forest boundaries across forest-grassland ecotones into the central United States. Forest land has shifted towards the center of the continent, as has the center of mean tree basal area, and a simple comparison of deciduous cover change also displayed forest advancement into the central United States from eastern forests. The expanding species may spread along riparian migration corridors that provide protection from drought. Humans use the advancing tree species for windbreaks, fencerows, and ornamental landscaping, while wildlife spread fruit seeds, which results in unintentional assisted migration, or translocation, to drier sites across the region.

Steady state peripheral blood provides cells with functional and metabolic characteristics of real hematopoietic stem cells.

PubMed

Bourdieu, Antonin; Avalon, Maryse; Lapostolle, Véronique; Ismail, Sadek; Mombled, Margaux; Debeissat, Christelle; Guérinet, Marianne; Duchez, Pascale; Chevaleyre, Jean; Vlaski-Lafarge, Marija; Villacreces, Arnaud; Praloran, Vincent; Ivanovic, Zoran; Brunet de la Grange, Philippe

2018-01-01

Hematopoietic stem cells (HSCs), which are located in the bone marrow, also circulate in cord and peripheral blood. Despite high availability, HSCs from steady state peripheral blood (SSPB) are little known and not used for research or cell therapy. We thus aimed to characterize and select HSCs from SSPB by a direct approach with a view to delineating their main functional and metabolic properties and the mechanisms responsible for their maintenance. We chose to work on Side Population (SP) cells which are highly enriched in HSCs in mouse, human bone marrow, and cord blood. However, no SP cells from SSBP have as yet been characterized. Here we showed that SP cells from SSPB exhibited a higher proliferative capacity and generated more clonogenic progenitors than non-SP cells in vitro. Furthermore, xenotransplantation studies on immunodeficient mice demonstrated that SP cells are up to 45 times more enriched in cells with engraftment capacity than non-SP cells. From a cell regulation point of view, we showed that SP activity depended on O 2 concentrations close to those found in HSC niches, an effect which is dependent on both hypoxia-induced factors HIF-1α and HIF-2α. Moreover SP cells displayed a reduced mitochondrial mass and, in particular, a lower mitochondrial activity compared to non-SP cells, while they exhibited a similar level of glucose incorporation. These results provided evidence that SP cells from SSPB displayed properties of very primitive cells and HSC, thus rendering them an interesting model for research and cell therapy. © 2017 Wiley Periodicals, Inc.

Five anthropogenic factors that will radically alter forest conditions and management needs in the Northern United States

Treesearch

Stephen R. Shifley; W. Keith Moser; David J. Nowak; Patrick D. Miles; Brett J. Butler; Francisco X. Aguilar; Ryan D. DeSantis; Eric J. Greenfield

2014-01-01

The Northern United States includes the 20 states bounded by Maine, Maryland, Missouri, and Minnesota. With 70 million ha of forestland and 124 million people, it is the most densely forested (42% of land area) and most densely populated (74 people/km2) quadrant of the United States. Three recent, large-scale, multiresource assessments of forest...

Soil quality in anthropized ecosystem located in two biomes in Campinas city / SP-Brazil

NASA Astrophysics Data System (ADS)

Márcia Longo, Regina; Corcovia, Marina; Gomes, Raissa Caroline; Bettine, Sueli C.; Demamboro, Antonio Carlos; Fengler, Felipe H.; Irio Ribeiro, Admilson

2017-04-01

The rapid growth of large urban centers and the expansion of agricultural activities promote direct pressures on natural ecosystems. These actions have led to constant discussions by researchers and society as a whole in relation to preservation and quality of terrestrial ecosystems, and soil and vegetation components of vital importance to maintain these. In this context, the present study was to evaluate the anthropogenic interferences on soil properties in areas in two forest fragments located in the remaining urban areas in different biomes of Campinas-SP , Brazil. Both have their edges significantly disturbed by the proximity to urban centers , highways, sugarcane cultivation, among others. The remnant of the Atlantic Forest has an area of 250.36 ha is found in a so called protected area of ecological interest (A.R.I.E). This site access is restricted and has conservation measures, but is near major highways. The remnant of savanna has an approximate area of 40 ha there and has no conservation measure, finding it quite degraded. The physical properties and chemical soil in the two situations were collected throughout the border area totaling 28 points in the remaining savanna and 40 in the Atlantic Forest. The results were analyzed using Principal Component Analysis (PCA) to determine the main soil properties that reflect the quality of the ecosystems studied. It can be seen that most of the physical-chemical soil parameters were impacted in some way related to each other and in two ecosystems that is, the size of the vectors and the distance between them are studied in corresponding situations. The bulk density parameter has different behavior between the two biomes, since the particle density is presented close to each other but have different vector sizes. Some of the parameters have been identified with strong relationship between biomes: the Exchange Capacity Cationic (ECC) and the amounts of copper (Cu) by its close proximity of the vectors and the aluminum content (Al) and iron (Fe) for having sizes similar vectors and an appropriate distance between them. The group attributes: pH, calcium (Ca), sum of bases (SB), magnesium (Mg) and base saturation (V%) were found grouped in the two biomes but in different quadrants, reaffirming the great relationship between these parameters. Regarding the organic matter content of these they were similar in the two biomes. The higher nickel content (Ni), chromium (Cr) and lead (Pb) were found in the remaining forest, probably due to the proximity to large vehicle traffic roads. In this context, it can be concluded that the areas under study are impacted negatively in their edge areas, and components such as proximity to agricultural areas and urban sprawl, as well as proximity to major roads may be interfering with the direct mode environmental quality of forest remaining soil from two different biomes located in urban areas, and changes in levels of heavy metals and bulk density were the most affected. 1 Part of the project funded by the Foundation of the State of São Paulo Research - Brazil (FAPESP - process 2012 / 14423-8)

Tapping into the Forest Management Assistance Programs

Treesearch

John L. Greene; Terry K. Haines

1998-01-01

Use of federal and state forest management assistance programs can enable nonindustial private forest owners to reduce their management expenses and practice better stewardship. This paper summarizes six federal and twelve state assistance programs available to owners in the North Central states. It also describes how to calculate the amount of a government...

BIRD'S EYE VIEW OF THE COMPLEX, VIEW LOOKING NORTHWEST, WITH ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

BIRD'S EYE VIEW OF THE COMPLEX, VIEW LOOKING NORTHWEST, WITH THE FOREST PRACTICES BUILDING IN THE FOREGROUND, THE K.O.G. BUILDING TO THE RIGHT OF VIEW, AND THE BRIDGE AND THE OREGON STATE FORESTER'S OFFICE BUILDING IN THE BACKGROUND. - Oregon State Forester's Office Complex, 2600 State Street, Salem, Marion, OR

Simulating timber management in Lake States forests.

Treesearch

Gary J. Brand

1981-01-01

Describes in detail a management subsystem to simulate cutting in Lake States forest types. This subsystem is part of a Stand and Tree Evaluation and Modeling System (STEMS) contained in the Forest Resource Evaluation Program (FREP) for the Lake States. The management subsystem can be used to test the effect of alternate management strategies.

36 CFR 242.14 - Relationship to State procedures and regulations.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false Relationship to State procedures and regulations. 242.14 Section 242.14 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE SUBSISTENCE MANAGEMENT REGULATIONS FOR PUBLIC LANDS IN ALASKA Program Structure § 242.14 Relationship to State procedures and...

Isolation of Paenibacillus sp. and Variovorax sp. strains from decaying woods and characterization of their potential for cellulose deconstruction.

PubMed

Ghio, Silvina; Lorenzo, Gonzalo Sabarís Di; Lia, Verónica; Talia, Paola; Cataldi, Angel; Grasso, Daniel; Campos, Eleonora

2012-01-01

Prospection of cellulose-degrading bacteria in natural environments allows the identification of novel cellulases and hemicellulases that could be useful in second-generation bioethanol production. In this work, cellulolytic bacteria were isolated from decaying native forest soils by enrichment on cellulose as sole carbon source. There was a predominance of Gram positive isolates that belonged to the phyla Proteobacteria and Firmicutes. Many primary isolates with cellulolytic activity were not pure cultures. From these consortia, isolation of pure constituents was attempted in order to test the hypothesis whether microbial consortia are needed for full degradation of complex substrates. Two isolates, CB1-2-A-5 and VG-4-A-2, were obtained as the pure constituents of CB1-2 and VG-4 consortia, respectively. Based on 16S RNA sequence, they could be classified as Variovorax paradoxus and Paenibacillus alvei. Noteworthy, only VG-4 consortium showed measurable xylan degrading capacity and signs of filter paper degradation. However, no xylan or filter paper degrading capacities were observed for the pure cultures isolated from it, suggesting that other members of this consortium were necessary for these hydrolyzing activities. Our results indicated that Paenibacillus sp. and Variovorax sp. as well as VG-4 consortium, might be a useful source of hydrolytic enzymes. Moreover, although Variovorax sp. had been previously identified in metagenomic studies of cellulolytic communities, this is the first report on the isolation and characterization of this microorganism as a cellulolytic genus.

Isolation of Paenibacillus sp. and Variovorax sp. strains from decaying woods and characterization of their potential for cellulose deconstruction

PubMed Central

Ghio, Silvina; Lorenzo, Gonzalo Sabarís Di; Lia, Verónica; Talia, Paola; Cataldi, Angel; Grasso, Daniel; Campos, Eleonora

2012-01-01

Prospection of cellulose-degrading bacteria in natural environments allows the identification of novel cellulases and hemicellulases that could be useful in second-generation bioethanol production. In this work, cellulolytic bacteria were isolated from decaying native forest soils by enrichment on cellulose as sole carbon source. There was a predominance of Gram positive isolates that belonged to the phyla Proteobacteria and Firmicutes. Many primary isolates with cellulolytic activity were not pure cultures. From these consortia, isolation of pure constituents was attempted in order to test the hypothesis whether microbial consortia are needed for full degradation of complex substrates. Two isolates, CB1-2-A-5 and VG-4-A-2, were obtained as the pure constituents of CB1-2 and VG-4 consortia, respectively. Based on 16S RNA sequence, they could be classified as Variovorax paradoxus and Paenibacillus alvei. Noteworthy, only VG-4 consortium showed measurable xylan degrading capacity and signs of filter paper degradation. However, no xylan or filter paper degrading capacities were observed for the pure cultures isolated from it, suggesting that other members of this consortium were necessary for these hydrolyzing activities. Our results indicated that Paenibacillus sp. and Variovorax sp. as well as VG-4 consortium, might be a useful source of hydrolytic enzymes. Moreover, although Variovorax sp. had been previously identified in metagenomic studies of cellulolytic communities, this is the first report on the isolation and characterization of this microorganism as a cellulolytic genus. PMID:23301200

Raman spectroscopy and x-ray diffraction of sp 3 CaC O 3 at lower mantle pressures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lobanov, Sergey S.; Dong, Xiao; Martirosyan, Naira S.

The exceptional ability of carbon to form sp 2 and sp 3 bonding states leads to a great structural and chemical diversity of carbon-bearing phases at nonambient conditions. Here we use laser-heated diamond-anvil cells combined with synchrotron x-ray diffraction, Raman spectroscopy, and first-principles calculations to explore phase transitions in CaC O 3 at P > 40 GPa . We find that postaragonite CaC O 3 transforms to the previously predicted P 2 1 / c CaC O 3 with sp 3 -hybridized carbon at 105 GPa ( ~ 30 GPa higher than the theoretically predicted crossovermore » pressure). The lowest-enthalpy transition path to P2 1 / c CaC O 3 includes reoccurring sp 2 and sp 3 CaC O 3 intermediate phases and transition states, as revealed by our variable-cell nudged-elastic-band simulation. Raman spectra of P 2 1 / c CaC O 3 show an intense band at 1025 c m -1 , which we assign to the symmetric C-O stretching vibration based on empirical and first-principles calculations. This Raman band has a frequency that is ~ 20 % low-ymmetric C-O stretching in sp 2 CaC O 3 due to the C-O bond length increase across the sp 2 ~ sp 3 transition and can be used as a fingerprint of tetrahedrally coordinated carbon in other carbonates.« less

Conformational Stability of the NH2-Terminal Propeptide of the Precursor of Pulmonary Surfactant Protein SP-B

PubMed Central

Bañares-Hidalgo, Ángeles; Estrada, Pilar

2016-01-01

Assembly of pulmonary surfactant lipid-protein complexes depends on conformational changes coupled with proteolytic maturation of proSP-B, the precursor of pulmonary surfactant protein B (SP-B), along the surfactant biogenesis pathway in pneumocytes. Conformational destabilization of the N-terminal propeptide of proSP-B (SP-BN) triggers exposure of the mature SP-B domain for insertion into surfactant lipids. We have studied the conformational stability during GdmCl- or urea-promoted unfolding of SP-BN with trp fluorescence and circular dichroism spectroscopies. Binding of the intermediate states to bis-ANS suggests their molten globule-like character. ΔG0H2O was ~ 12.7 kJ·mol-1 either with urea or GdmCl. None of the thermal transitions of SP-BN detected by CD correspond to protein unfolding. Differential scanning calorimetry of SP-BN evidenced two endothermic peaks involved in oligomer dissociation as confirmed with 2 M urea. Ionic strength was relevant since at 150 mM NaCl, the process originating the endotherm at the highest temperature was irreversible (Tm2 = 108.5°C) with an activation energy of 703.8 kJ·mol-1. At 500 mM NaCl the process became reversible (Tm2 = 114.4°C) and data were fitted to the Non-two States model with two subpeaks. No free thiols in the propeptide could be titrated by DTNB with or without 5.7 M GdmCl, indicating disulfide bonds establishment. PMID:27380171

Asilidae (Diptera) of two Atlantic Forest protected areas of Rio de Janeiro, Southeastern Brazil.

PubMed

Moreira-Junior, Danilo P; Maia, Valéria C

2018-01-01

As few Asilidae inventories of Rio de Janeiro areas have been published, there are many data gaps. This paper aims to contribute to the knowledge of richness, abundance and distribution of this family in this State. From January 2013 to March 2014, insects were collected monthly using Malaise traps and every two months using entomological nets in the Reserva Biológica União (REBIO), and Estação Ecológica Estadual de Guaxindiba (EEEG). 682 specimens of Asilidae were collected in the present study, distributed in 31 genera and 51 species (20 identified and 31 unidentified), 527 of REBIO (in 19 genera and 38 species - 14 identified and 24 unidentified), and 155 specimens of EEEG (in 12 genera and 19 species - 6 identified and 13 unidentified). Leptogaster was the most abundant genus being L. tropica (Curran 1934) the most abundant species in the REBIO, with 268 specimens and Leptogaster sp., with 54 specimens, the most abundant in the EEEG. All records of genera and species in the present study are new in the REBIO and EEEG, wich contribute to the knowledge of the Asilidae geographic distribution and richness in the State of Rio de Janeiro.

Comparative virulence and molecular diversity of stripe rust (Puccinia striiformis f. sp. tritici) collections from Pakistan and United States

USDA-ARS?s Scientific Manuscript database

Information on virulence and molecular diversity of Puccinia striiformis f. sp. tritici (Pst) is a pre-requisite for mitigating the substantial yield losses caused by the stripe rust pathogen in Pakistan, the United States and other countries of the world. This study was undertaken to analyze both v...

Virulence differences in blumeria graminis f. sp. tritici from the central and eastern United States

USDA-ARS?s Scientific Manuscript database

Wheat powdery mildew is a disease of international importance that occurs across a wide geographic area in the USA. A virulence survey of Blumeria graminis f. sp. tritici, the causal agent, was conducted by sampling 36 wheat fields in 15 U.S. states in the years 2013 and 2014. Using a hierarchical...

The reciprocal relationship between sickness presenteeism and psychological distress in response to job stressors: evidence from a three-wave cohort study.

PubMed

Oshio, Takashi; Tsutsumi, Akizumi; Inoue, Akiomi; Suzuki, Tomoko; Miyaki, Koichi

2017-11-25

Sickness presenteeism (SP) is postulated as workers' response to their general state of health; hence, SP is expected to affect workers' future health. In the present study, we examined the reciprocal relationship between SP and health in response to job stressors, with specific reference to psychological distress (PD) as workers' state of health. We conducted mediation analysis, using data from a three-wave cohort occupational survey conducted at 1-year intervals in Japan; it involved 1,853 employees (1,661 men and 192 women) of a manufacturing firm. We measured SP and PD, using the World Health Organization Health and Work Performance Questionnaire and Kessler 6 score, respectively. For job stressors, we considered job demands and control, effort and reward, and procedural and interactional justice. PD mediated 11.5%-36.2% of the impact of job control, reward, and procedural and interactional justice on SP, whereas SP mediated their impact on PD, albeit to a much lesser extent in the range of 3.4%-11.3%. Unlike in the cases of these job stressors related to job resources, neither SP nor PD mediated the impact of job demands or effort. Our results confirmed the reciprocal relationship between SP and PD in response to selected types of job stressors, emphasizing the need for more in-depth analysis of the dynamics of these associations.

In situ and nonvolatile photoluminescence tuning and nanodomain writing demonstrated by all-solid-state devices based on graphene oxide.

PubMed

Tsuchiya, Takashi; Tsuruoka, Tohru; Terabe, Kazuya; Aono, Masakazu

2015-02-24

In situ and nonvolatile tuning of photoluminescence (PL) has been achieved based on graphene oxide (GO), the PL of which is receiving much attention because of various potential applications of the oxide (e.g., display, lighting, and nano-biosensor). The technique is based on in situ and nonvolatile tuning of the sp(2) domain fraction to the sp(3) domain fraction (sp(2)/sp(3) fraction) in GO through an electrochemical redox reaction achieved by solid electrolyte thin films. The all-solid-state variable PL device was fabricated by GO and proton-conducting mesoporous SiO2 thin films, which showed an extremely low PL background. The device successfully tuned the PL peak wavelength in a very wide range from 393 to 712 nm, covering that for chemically tuned GO, by adjusting the applied DC voltage within several hundred seconds. We also demonstrate the sp(2)/sp(3) fraction tuning using a conductive atomic force microscope. The device achieved not only writing, but also erasing of the sp(2)/sp(3)-fraction-tuned nanodomain (both directions operation). The combination of these techniques is applicable to a wide range of nano-optoelectronic devices including nonvolatile PL memory devices and on-demand rewritable biosensors that can be integrated into nano- and microtips which are transparent, ultrathin, flexible, and inexpensive.

18 Years of Recovery: Spatial Variation and Structure of a Secondary Forest Analyzed with Airborne Lidar Data in the Brazilian Atlantic Forest

NASA Astrophysics Data System (ADS)

dos-Santos, M. N.; Keller, M. M.; Scaranello, M. A., Sr.; Longo, M.; Daniel, P.

2016-12-01

Ongoing forest fragmentation in the tropics severely reduces the ability of remaining forests to store carbon and provide ecosystem services, however, secondary regeneration could offset the impacts of forest degradation. Previous plot-based forest inventory studies have shown that secondary regeneration is promoted at remnant forest edges. However, this process has not been studied at landscape scale. We used over 450 ha of lidar data to study the forest structure and spatial variation of secondary growth forest 18 years after swidden cultivation abandonment in Serra do Conduro State Park. Lidar data was acquired in December 2015 with a density of 93 points per square meter using an airborne scanning laser system (Optech Orion M-300). Serra do Conduru, a 10 000 ha State Park in Bahia was created in 1997 as part of a network of forest reserves with both old-growth forest and secondary forest aiming at establishing a central corridor of the Atlantic forest. The Brazilian Atlantic forest is a highly human modified and fragmented forest landscape reduced to 12.5% of its original extent. Prior to the establishment of the State Park, the area was a mosaic of forest and agricultural area. We created 10m wide buffers from the edge of the remnant forest into the secondary forest and generated lidar metrics for each strip in order to ask: does the distance from the remnant forest create a gradient effect on the secondary forest structure? We cross-compared the lidar metrics of the samples. Results demonstrate that distance from old-growth forest promotes spatial variation in forest recovery and forest structure.

The impact of reforestation in the northeast United States on precipitation and surface temperature

NASA Astrophysics Data System (ADS)

Clark, Allyson

Since the 1920s, forest coverage in the northeastern United States has recovered from disease, clearing for agricultural and urban development, and the demands of the timber industry. Such a dramatic change in ground cover can influence heat and moisture fluxes to the atmosphere, as measured in altered landscapes in Australia, Israel, and the Amazon. In this study, the impacts of recent reforestation in the northeastern United States on summertime precipitation and surface temperature were quantified by comparing average modern values to 1950s values. Weak positive (negative) relationships between reforestation and average monthly precipitation and daily minimum temperatures (average daily maximum surface temperature) were found. There was no relationship between reforestation and average surface temperature. Results of the observational analysis were compared with results obtained from reforestation scenarios simulated with the BUGS5 global climate model. The single difference between the model runs was the amount of forest coverage in the northeast United States; three levels of forest were defined - a grassland state, with 0% forest coverage, a completely forested state, with approximately 100% forest coverage, and a control state, with forest coverage closely resembling modern forest coverage. The three simulations were compared, and had larger magnitude average changes in precipitation and in all temperature variables. The difference in magnitudes between the model simulations observations was much larger than the difference in the amount of reforestation in each case. Additionally, unlike in observations, a negative relationship was found between average daily minimum temperature and amount of forest coverage, implying that additional factors influence temperature and precipitation in the real world that are not accounted for in the model.

The Effect of Solar Radiation on Molecular Nitrogen Emissions Originating in the Sunlit Thermosphere of Earth.

NASA Astrophysics Data System (ADS)

Hatfield, David Brooke

The vibrational distribution of N_2 triplet states in the sunlit upper thermosphere of Earth is measured and modeled for the first time. A comparison is made between measured and theoretical limb column emission rates for bands originating from each upper vibrational level of C^3Pi_ u(v) and A^3Sigma_sp {u}{+}(v). The measured column emission rates for the Second Positive (2PG) bands are 3.2 (+/-0.2), 3.2 (+/-0.2) and 0.6 (+0.0,-0.4) kRayleighs for bands originating from C^3Pi_ u(0<=qrm v<=q2) and 13.3 ( +/-0.2), 10.0 (+/-0.2), 3 (+0,-2) and 2 (+0,-2) kRayleighs for Vegard-Kaplan (VK) bands originating from A^3Sigma_sp{u}{+ }(0<=qrm v<=q3).. Predicted limb column emission rates for C ^3Pi_ u(v) are in excellent agreement with the measured 2PG intensities, but comparisons of predicted A^3Sigma_sp{u }{+}(v) column emissions to measured VK intensities are poor. Despite this discrepancy, the predicted sum of all A^3Sigma_sp {u}{+}(v) emission rates over all v compared well to the sum of measured VK intensities. This implies that the excitation rate into the N_2 triplet states is well understood, but that the cascade mechanisms are not as yet understood sufficiently to use dayglow N_2 band emissions as remote sensing probes of the sunlit thermosphere. The dayglow N_2 emissions are modeled by extending the existing auroral model to include resonance scattering of sunlight and replacing the precipitating auroral electrons with photoelectrons. The effects of solar resonance scattering on the X ^1Sigma_sp{g}{+}, A^3Sigma_sp{u }{+} and B^3Pi _ g states are presented as a function of A^3Sigma_sp{u}{+ } quenching rate. These theoretical predictions have important implications for the analysis of dayglow and auroral emissions. The effect of resonance scattering on the A^3Sigma_sp{u} {+} state is small, and will not be measurable under auroral conditions. This implies that the measured auroral vibrational population of the A^3 Sigma_sp{u}{+} state is valid for sunlit aurora. The population of B ^3Pi_ g(v = O) relative to other B^3Pi_ g(v) states is predicted to be enhanced by sunlight. A novel set of computer variables based on tree structures was created to manage the information used. These variables are described in detail and were found to be useful tools for the creation and extension of computer models treating diatomic species.

Three new brackish-water thalassocypridine species (Crustacea: Ostracoda: Paracyprididae) from the Ryukyu Islands, southwestern Japan.

PubMed

Hiruta, Shimpei F; Kakui, Keiichi

2016-09-21

We describe three new species of brackish-water ostracods representing two genera in the ostracod tribe Thalassocypridini from mangrove forests in the Ryukyu Islands, subtropical southwestern Japan, and provide their barcoding sequences for the mitochondrial cytochrome c oxidase subunit I (COI) gene. Mangalocypria ryukyuensis sp. nov. was found on Okinawa Island. We also found a Mangalocypria population on Ishigaki Island that was morphologically identical to M. ryukyuensis on Okinawa, but an individual differed by 4.7% in COI sequence (K2P distance) from an individual from Okinawa. This is the first record for Japan of a species in Mangalocypria. Paracypria longiseta sp. nov., obtained from Okinawa Island, is similar to Pontoparta hartmanni. Paracypria plumosa sp. nov. from Ishigaki Island is similar to Pa. adnata described from Yakushima Island, Japan. The COI genetic distance between individuals of Pa. longiseta and Pa. plumosa was roughly as large as that between either of these species and individuals in the Mangalocypria populations. Our study underscores that genera in Thalassocypridini may not represent natural groups, and that this tribe needs taxonomic revision.

Hidden in the mangrove forest: the cryptic intertidal mite Carinozetes mangrovi sp. nov. (Acari, Oribatida, Selenoribatidae).

PubMed

Pfingstl, Tobias; Lienhard, Andrea; Jagersbacher-Baumann, Julia

2014-08-01

The small archipelago of Bermuda is a geologically young landmass in the Western Atlantic Ocean and recently turned out to be inhabited by a number of intertidal oribatid mites. One newly described species, Carinozetes bermudensis, showed an unusual vast range of habitats like sandy beaches, rocky substrate and mangroves. In the present study, 13 Bermudian populations of C. bermudensis were analysed to verify species integrity of specimens from different microhabitats. A morphometric analysis of 17 continuous variables as well as a molecular genetic investigation of the mitochondrial cytochrome oxidase subunit I revealed the existence of a new species Carinozetes mangrovi sp. nov., inhabiting exclusively intertidal algae growing on mangrove roots. Although both species are morphologically nearly identical, the configuration of the genus-specific ventral carinae represents a clear diagnostic character. The high genetic divergence of approximately 12 % of the cytochrome oxidase subunit I gene sequence between C. bermudensis and C. mangrovi sp. nov. suggests that these two species diverged before the emergence of the Bermuda islands. Accordingly, both of them are older than the geologically young archipelago of Bermuda.

Texas' forests, 2008

Treesearch

James W. Bentley; Consuelo Brandeis; Jason A. Cooper; Christopher M. Oswalt; Sonja N. Oswalt; KaDonna Randolph

2014-01-01

This bulletin describes forest resources of the State of Texas at the time of the 2008 forest inventory. This bulletin addresses forest area, volume, growth, removals, mortality, forest health, timber product output, and the economy of the forest sector.

Design, implementation, and analysis methods for the National Woodland Owner Survey

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Brett J. Butler; Earl C. Leatherberry; Michael S. Williams; Michael S. Williams

2005-01-01

The National Woodland Owner Survey (NWOS) is conducted by the USDA Forest Service, Forest Inventory and Analysis program to increase our understanding of private forest-land owners in the United States. The information is intended to help policy makers, resource managers, and others interested in the forest resources of the United States better understand the social...

Summary Report: Forest Health Monitoring in the South, 1991

Treesearch

William A. Bechtold; William H. Hoffard; Robert L. Anderson

1992-01-01

The USDA Forest Service and the U.S. Environmental Protection Agency have launched a joint program to monitor the health of forests iu the United States. The program is still in the initial phases of implementation, but several indicators of forest health are undergoiug development and permanent plots have been established in 12 States. This report contains...

Federated States of Micronesia's forest resources, 2006

Treesearch

Joseph A. Donnegan; Sarah L. Butler; Olaf Kuegler; Bruce A. Hiserote

2011-01-01

The Forest Inventory and Analysis program collected, analyzed, and summarized field data on 73 forested field plots on the islands of Kosrae, Chuuk, Pohnpei, and Yap in the Federated States of Micronesia (FSM). Estimates of forest area, tree stem volume and biomass, the numbers of trees, tree damages, and the distribution of tree sizes were summarized for this...

Interactions between white-tailed deer density and the composition of forest understories in the northern United States

Treesearch

Matthew B. Russell; Christopher W. Woodall; Kevin M. Potter; Brian F. Walters; Grant M. Domke; Christopher M. Oswalt

2017-01-01

Forest understories across the northern United States (US) are a complex of tree seedlings, endemic forbs, herbs, shrubs, and introduced plant species within a forest structure defined by tree and forest floor attributes. The substantial increase in white-tailed deer (Odocoileus virginianus Zimmerman) populations over the past decades has resulted...

An improved method for standardized mapping of drought conditions

Treesearch

Frank H. Koch; William D. Smith; John W. Coulston

2013-01-01

Virtually all U.S. forests experience droughts, although the intensity and frequency of the droughts vary widely between, as well as, within forest ecosystems (Hanson and Weltzin 2000). Generally, forests throughout the Western United States are subject to annual seasonal droughts, while forests in the Eastern United States can be characterized by one of two...

Thinning and burning in dry coniferous forests of the Western United States: effectiveness in altering diameter distributions

Treesearch

Andrew Youngblood

2010-01-01

Western United States land managers are conducting fuel reduction and forest restoration treatments in forests with altered structural conditions. As part of the National Fire and Fire Surrogate (FFS) study, thinning and burning treatments were evaluated for changing forest structure. Shifts between pretreatment and posttreatment diameter distributions at seven western...

Lichen communities as climate indicators in the U.S. Pacific States.

Treesearch

Robert J. Smith; Sarah Jovan; Bruce McCune

2017-01-01

Epiphytic lichens are bioindicators of climate, air quality, and other forest conditions and may reveal how forests will respond to global changes in the U.S. Pacific States of Alaska, Washington, Oregon, and California. We explored climate indication with lichen communities surveyed by using both the USDA Forest Service Forest Inventory and Analysis (FIA) and Alaska...

Screening for resistance to fusiform rust in southern United States forest trees

Treesearch

Josh Bronson

2012-01-01

The Resistance Screening Center (RSC) is operated by the Forest Health Protection unit of the U.S. Department of Agriculture, Forest Service, Southern Region, State and Private Forestry. The RSC is located at the Bent Creek Experimental Forest near Asheville, North Carolina. The center evaluates seedlings for resistance to disease, primarily fusiform rust (caused by...

Status and progress in large-scale assessment of biological diversity in the United States

Treesearch

S. R. Shifley; C. H. Flather; W. B. Smith; K. H. Riitters; C. H. Sieg

2010-01-01

Conservation of biological diversity is one of seven criteria used to evaluate forest sustainability in the United States. The status of biological diversity is characterized by nine indicators that report area, protected status, and fragmentation of forest habitats; number and conservation status of forest-associated species; range and abundance of forest species to...

Crown-condition classification: a guide to data collection and analysis

Treesearch

Michael E. Schomaker; Stanley J. Zarnoch; William A. Bechtold; David J. Latelle; William G. Burkman; Susan M. Cox

2007-01-01

The Forest Inventory and Analysis (FIA) Program of the Forest Service, U.S. Department of Agriculture, conducts a national inventory of forests across the United States. A systematic subset of permanent inventory plots in 38 States is currently sampled every year for numerous forest health indicators. One of these indicators, crown-condition classification, is designed...

Nontimber forest products in the United States: an analysis for the 2015 National Sustainable Forest Report

Treesearch

James Chamberlain; Aaron Teets; Steve Kruger

2018-01-01

Worldwide, forest plants and fungi that are harvested for their nontimber products are critical for the health of the ecosystems and the well-being of people who benefit from the harvest. This document provides an analysis of the volumes and values of nontimber forest products in the United States. It presents...

The Stephen F. Austin Experimental Forest

Treesearch

Cary C. Russell; Ronald E. Thill; David L. Kulhavy

2002-01-01

On December 14, 1944, the Seventy-Eighth United States Congress passed a bill that authorized the transfer of 2,560 acres in Nacogdoches County, Texas, to the research branch of the United States Forest Service (USFS). This land became the Stephen F. Austin Experimental Forest (SFAEF) on September 19. 1945. One of eighty-one federal experimental forests and ranges...

Patterns and trends of early successional forests in the Eastern United States

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Margaret K. Trani; Robert T. Brooks; Thomas L. Schmidt; Victor A. Rudis; Christine M. Gabbard

2001-01-01

We assessed the status of early successional forest conditions for 33 Eastern States within the New England, Middle Atlantic, Great Lakes, Central Plains, Coastal South, and Interior South subregions. We used Forest Inventory and Analysis surveys to analyze trends from 1946 to 1998. Dramatic regional differences occurred in distribution of early successional forests....

A closer look at forests on the edge: future development on private forests in three states.

Treesearch

Eric White; Rhonda. Mazza

2008-01-01

Privately owned forests provide many public benefits, including clean water and air, wildlife habitat, and recreational opportunities. By 2030, 44.2 million acres of rural private forest land across the conterminous United States are projected to experience substantial increases in residential development. As housing density increases, the public benefits provided by...

Modeling Actual Evapotranspiration From Forested Watersheds Across the Southeastern United States

Treesearch

Jianbiao Lu; Ge Sun; Steven G. McNulty; Devendra M. Amatya

2003-01-01

About 50 to 80 percent of precipitation in the southeastern United States returns to the atmosphere by evapotranspiration. As evapotranspiration is a major component in the forest water balances, accurately quantifying it is critical to predicting the effects of forest management and global change on water, sediment, and nutrient yield from forested watersheds. However...