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Sample records for fork projects thompson

  1. Wildlife Impact Assessment and Summary of Previous Mitigation Related to Hydroelectric Projects in Montana, Phase I, Volume Two (A), Clark Fork Projects, Thompson Falls Dam, Operator, Montana Power Company.

    SciTech Connect

    Wood, Marilyn

    1984-03-27

    The Thompson Falls Dam inundated approximately 347 acres of wildlife habitat that likely included conifer forests, deciduous bottoms, mixed conifer-deciduous forests and grassland/hay meadows. Additionally, at least one island, and several gravel bars were inundated when the river was transformed into a reservoir. The loss of riparian and riverine habitat adversely affected the diverse wildlife community inhabiting the lower Clark Fork River area. Quantitative loss estimates were determined for selected target species based on best available information. The loss estimates were based on inundation of the habitat capable of supporting the target species. Whenever possible, loss estimates bounds were developed by determining ranges of impacts based on density estimates and/or acreage loss estimates. Of the twelve target species or species groups, nine were assessed as having net negative impacts. 86 refs., 2 figs., 5 tabs.

  2. Final 2014 Remedial Action Report Project Chariot, Cape Thompson, Alaska

    SciTech Connect

    None, None

    2015-03-01

    This report was prepared to document remedial action (RA) work performed at the former Project Chariot site located near Cape Thompson, Alaska during 2014. The work was managed by the U.S. Army Corps of Engineers (USACE) Alaska District for the U.S. Department of Energy (DOE) Office of Legacy Management (LM). Due to the short field season and the tight barge schedule, all field work was conducted at the site July 6 through September 12, 2014. Excavation activities occurred between July 16 and August 26, 2014. A temporary field camp was constructed at the site prior to excavation activities to accommodate the workers at the remote, uninhabited location. A total of 785.6 tons of petroleum, oil, and lubricants (POL)-contaminated soil was excavated from four former drill sites associated with test holes installed circa 1960. Diesel was used in the drilling process during test hole installations and resulted in impacts to surface and subsurface soils at four of the five sites (no contamination was identified at Test Hole Able). Historic information is not definitive as to the usage for Test Hole X-1; it may have actually been a dump site and not a drill site. In addition to the contaminated soil, the steel test hole casings were decommissioned and associated debris was removed as part of the remedial effort.

  3. 77 FR 47058 - Middle Fork American River Hydroelectric Project Placer County Water Agency; Notice of Draft...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-07

    ... Energy Regulatory Commission Middle Fork American River Hydroelectric Project Placer County Water Agency... comments on the draft environmental impact statement for the Middle Fork American River Project No. 2079... project. This meeting is posted on the Commission's calendar located at...

  4. Environmental Restoration of Diesel-Range Organics from Project Chariot, Cape Thompson, Alaska

    SciTech Connect

    Kautsky, Mark; Hutton, Rick; Miller, Judy

    2016-03-06

    The Chariot site is located in the Ogotoruk Valley in the Cape Thompson region of northwest Alaska. Project Chariot was part of the Plowshare Program, created in 1957 by the US Atomic Energy Commission (AEC), a predecessor agency of the US Department of Energy (DOE), to study peaceful uses for atomic energy. Project Chariot began in 1958 when a scientific field team chose Cape Thompson as a potential site to excavate a harbor using a series of nuclear explosions. AEC, with assistance from other agencies, conducted more than 40 pretest bioenvironmental studies of the Cape Thompson area between 1959 and 1962; however, the Plowshare Program work at the Project Chariot site (Figure 1) was cancelled because of strong public opposition [1]. No nuclear explosions were ever conducted at the site.

  5. Evaluation of the Fort Gay-Thompson Urban/Rural Project.

    ERIC Educational Resources Information Center

    Bertram, Charles L.; And Others

    Purpose of the Fort Gay-Thompson Urban/Rural project was to combine the efforts of school and community persons so as to provide a more effective educational program for the west central section of Wayne County, West Virginia. To date, the school-community planning process had resulted in needs assessment and career education programs,…

  6. Oak Grove Fork Habitat Improvement Project, 1988 Annual Report.

    SciTech Connect

    Bettin, Scott

    1989-04-01

    The Lower Oak Grove Fork of the Clackamas River is a fifth-order tributary of the Clackamas River drainage supporting depressed runs of coho and chinook salmon, and summer and winter steelhead. Habitat condition rating for the Lower Oak Grove is good, but smelt production estimates are below the average for Clackamas River tributaries. Limiting factors in the 3.8 miles of the Lower Oak Grove supporting anadromous fish include an overall lack of quality spawning and rearing habitat. Beginning in 1986. measures to improve fish habitat in the Lower Oak Grove were developed in coordination with the Oregon Department of Fish and Wildlife (ODF&W) and Portland General Electric (PGE) fisheries biologists. Prior to 1986, no measures had been applied to the stream to mitigate for PGE's storage and regulation of flows in the Oak Grove Fork (Timothy Lake, Harriet Lake). Catchable rainbow trout are stocked by ODF&W two or three times a year during the trout fishing season in the lowermost portion of the Oak Grove Fork near two Forest Service campgrounds (Ripplebrook and Rainbow). The 1987 field season marked the third year of efforts to improve fish habitat of the Lower Oak Grove Fork and restore anadromous fish production. The efforts included the development of an implementation plan for habitat improvement activities in the Lower Oak Grove Fork. post-project monitoring. and maintenance of the 1986 improvement structures. No new structures were constructed or placed in 1987. Fiscal year 1988 brought a multitude of changes which delayed implementation of plans developed in 1987. The most prominent change was the withdrawal of the proposed Spotted Owl Habitat Area (SOHA) which overlapped the Oak Grove project implementation area. Another was the change in the Forest Service biologist responsible for implementation and design of this project.

  7. Wildlife and Wildlife Habitat Mitigation Plan for the Thompson Falls Hydroelectric Project, Final Report.

    SciTech Connect

    Bissell, Gael; Wood, Marilyn

    1985-08-01

    This document presents a preliminary mitigation and enhancement plan for the Thompson Falls hydroelectric project. It discusses options available to provide wildlife protection, mitigation and enhancement in accordance with the Pacific Northwest Electric Power Planning and Conservation Act of 1980 (P.L. 96-501). The options focus on mitigation for wildlife and wildlife habitat losses attributable to the construction of the hydroelectric project. These losses were previously estimated from the best available information concerning the degree of negative and positive impacts to target wildlife species (Wood and Olsen 1984). Criteria by which the mitigation alternatives were evaluated were the same as those used to assess the impacts identified in the Phase I document (Wood and Olsen 1984). They were also evaluated according to feasibility and cost effectiveness. This document specifically focuses on mitigation for target species which were identified during Phase I (Wood and Olsen 1984). It was assumed mitigation and enhancement for the many other target wildlife species impacted by the hydroelectric developments will occur as secondary benefits. The recommended mitigation plan includes two recommended mitigation projects: (1) development of wildlife protection and enhancement plans for MPC lands and (2) strategies to protect several large islands upstream of the Thompson Falls reservoir. If implemented, these projects would provide satisfactory mitigation for wildlife losses associated with the Thompson Falls hydroelectric project. The intent of the mitigation plan is to recommend wildlife management objectives and guidelines. The specific techniques, plans, methods and agreements would be developed is part of the implementation phase.

  8. 76 FR 46721 - Salmon-Challis National Forest, ID; Upper North Fork HFRA Ecosystem Restoration Project...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-03

    ... County and the State of Idaho. Lemhi County's Wildfire Prevention Plan has designated the North Fork... the potential for large-scale, high-intensity wildfires that threaten human life, property, and... uncharacteristic high-intensity wildfires and landscape restoration needs in the project. It is important...

  9. South Fork Snake River/Palisades Wildlife Mitigation Project: Environmental assessment

    SciTech Connect

    1995-09-01

    BPA proposes to fund the implementation of the South Fork Snake River Programmatic Management Plan to compensate for losses of wildlife and wildlife habitat due to hydroelectric development at Palisades Dam. The Idaho Department of Fish and Game drafted the plan, which was completed in May 1993. This plan recommends land and conservation easement acquisition and wildlife habitat enhancement measures. These measures would be implemented on selected lands along the South Fork of the Snake River between Palisades Dam and the confluence with the Henry`s Fork, and on portions of the Henry`s Fork located in Bonneville, Madison, and Jefferson Counties, Idaho. BPA has prepared an Environmental Assessment evaluating the proposed project. The EA also incorporates by reference the analyses in the South Fork Snake River Activity/Operations Plan and EA prepared jointly in 1991 by the Bureau of Land Management and the Forest Service. Based on the analysis in the EA, BPA has determined that the proposed action is not a major Federal action significantly affecting the quality of the human environment within the meaning of the National Environmental Policy Act (NEPA) of 1969. Therefore, the preparation of an Environmental Impact Statement (EIS) is not required and BPA is issuing this FONSI.

  10. Diamond Fork Power System, Bonneville Unit, Central Utah Project

    SciTech Connect

    Not Available

    1984-01-01

    A proposed water project in central Utah that would be connected with the Bonneville Unit would provide both hydroelectric power and water for the area. A summary of the final environmental impact statement describes construction components of the five power plants, tunnels, penstocks, aqueducts, pipelines, transmission lines, and plans for mitigating land use. The area would benefit from the electric power, water, and recreational and fishing opportunities, but there would be a loss of vegetation and riparian habitat. Grazing land would diminish and become more expensive, and there would be a loss of habitat for some endangered species. The Federal Water Pollution Control Act, the Colorado River Storage Project Act of 1956, and two Executive Orders are the legal mandates for the assessment.

  11. South Fork John Day River Habitat Enhancement Project : Annual Reports 1986, 1987 and Final Report.

    SciTech Connect

    Wiley, Ron

    1993-05-01

    The South Fork John Day River (SFJDR) contains important wild summer steelhead habitat. Adult fish annually return to the drainage to spawn. All tributaries accessible to steelhead are used for spawning. Additionally, juvenile steelhead rear in the SFJDR and its tributaries from two to three years before migrating to the ocean. The role of the SFJDR in rearing juvenile steelhead, particularly from age 1+ to smolt, is vital to the system as a whole. Many, if not all, of the tributaries produce juveniles in numbers exceeding the stream's capacity to rear to smolt. These fish migrate to the SFJDR and are reared to smolt there. Factors limiting steelhead production in the SFJDR are: Poor quantity and quality of pool habitat; low summer flows; high water temperatures; and excessive sediment load. During September 1986, 1,500 boulders were placed in 14 reaches of the South Fork John Day River approximately between RM 14 and RM 25. A number of smaller boulders were also placed by the contract or rather than return them to the rock pit. The boulders were placed in a variety of configurations, each determined as best fitted to specific site features (such as, depth, flow, velocity, bank condition, existing or potential riparian cover). It is estimated this project will provide rearing area for an additional 7,500 summer steelhead smolts.

  12. Milton (Milt) O. Thompson

    NASA Technical Reports Server (NTRS)

    1960-01-01

    Milton O. Thompson was hired as an aeronautical research scientist at the National Advisory Committee for Aeronautics' High-Speed Flight Station, Edwards, California, on March 19, 1956, becoming a research pilot in January 1958. During his 37-year career at what became the National Aeronautics and Space Administration's Dryden Flight Research Center in 1976, Milt managed several research programs and flew many research flights. One of Milt's first research projects, after he became a research pilot, was a program to investigate the feasibility of obtaining substantial amounts of laminar flow on an airfoil at supersonic speeds. The testbed aircraft was an F-104 with one wing covered with a fiberglass glove that served as the test section for the experiment. Next was the Air Launched Sounding Rocket (ALSOR) research program using an F-104 with a rocket launcher installed on it. The intent of the program was to release a balloon from an air launched rocket at over 1,000,000 feet altitude (approximately 190 miles) and then measure its rate of descent to determine air density. In 1959, Thompson was assigned to the Boeing X-20 Dyna-Soar program as a pilot-consultant. The X-20 program was scheduled to launch a human into Earth orbit and recover with a horizontal ground landing. The program was canceled before construction of the vehicle began. Milt became interested in the Rogallo-wing concept, 'Parawing', for spacecraft reentry. The best way to acquire experience, of course, was by building and flying a Paraglider Research Vehicle (Paresev). After ground tows to demonstrate controllability with Milt in the cockpit, he made the first flight aloft on March 12, 1962. On August 16, 1963 Thompson became the first person to fly a lifting body, the lightweight M2-F1. The plywood and steel-tubing prototype was flown as a glider after releasing from an R4D tow plane. He flew it a total of 47 times, and also made the first five flights of the all-metal M2-F2 lifting body

  13. The Little Thompson Observatory

    NASA Astrophysics Data System (ADS)

    Schweitzer, A.; Melsheimer, T.; Rideout, C.; Vanlew, K.

    1998-12-01

    The Little Thompson Observatory is believed to be the first observatory built as part of a high school and accessible to other schools remotely, via the Internet. This observatory is the second member of the Telescopes in Education (TIE) project. Construction is nearly completed and first light is planned for fall 1998. The observatory is located on the grounds of Berthoud High School in northern Colorado. Local schools and youth organizations will have prioritized access to the telescope, and there will also be opportunities for public viewing. After midnight, the telescope will be open to world-wide use by schools via the Internet following the model of the first TIE observatory, the 24" telescope on Mt. Wilson. That telescope has been in use for the past four years by up to 50 schools per month. Students remotely connect to the observatory over the Internet, and then receive the images on their local computers. The observatory grew out of grassroots support from the local community surrounding Berthoud, Colorado, a town of 3,500 residents. TIE has provided the observatory with a Tinsley 18" Cassegrain telescope on a 10-year loan. The facility has been built with tremendous support from volunteers and the local school district. We have applied for an IDEAS grant to provide teacher training workshops which will allow K-12 schools in northern Colorado to make use of the Little Thompson Observatory, including remote observing from classrooms.

  14. The Little Thompson Observatory

    NASA Astrophysics Data System (ADS)

    Schweitzer, A. E.; VanLew, K.; Melsheimer, T.; Sackett, C.

    1999-12-01

    The Little Thompson Observatory is the second member of the Telescopes in Education (TIE) project. Construction of the dome and the remote control system has been completed, and the telescope is now on-line and operational over the Internet. The observatory is located on the grounds of Berthoud High School in northern Colorado. Local schools and youth organizations have prioritized access to the telescope, and there are monthly opportunities for public viewing. In the future, the telescope will be open after midnight to world-wide use by schools following the model of the first TIE observatory, the 24" telescope on Mt. Wilson. Students remotely connect to the observatory over the Internet, and then receive the images on their local computers. The observatory grew out of grassroots support from the local community surrounding Berthoud, Colorado, a town of 3,500 residents. TIE has provided the observatory with a Tinsley 18" Cassegrain telescope on a 10-year loan. The facility has been built with tremendous support from volunteers and the local school district. With funding from an IDEAS grant, we have begun teacher training workshops which will allow K-12 schools in northern Colorado to make use of the Little Thompson Observatory, including remote observing from classrooms.

  15. The Little Thompson Observatory

    NASA Astrophysics Data System (ADS)

    Schweitzer, A.; Melsheimer, T.; Sackett, C.

    1999-05-01

    The Little Thompson Observatory is believed to be the first observatory built as part of a high school and accessible to other schools remotely, via the Internet. This observatory is the second member of the Telescopes in Education (TIE) project. Construction of the building and dome has been completed, and first light is planned for spring 1999. The observatory is located on the grounds of Berthoud High School in northern Colorado. Local schools and youth organizations will have prioritized access to the telescope, and there will also be opportunities for public viewing. After midnight, the telescope will be open to world-wide use by schools via the Internet following the model of the first TIE observatory, the 24" telescope on Mt. Wilson. Students remotely connect to the observatory over the Internet, and then receive the images on their local computers. The observatory grew out of grassroots support from the local community surrounding Berthoud, Colorado, a town of 3,500 residents. TIE has provided the observatory with a Tinsley 18" Cassegrain telescope on a 10-year loan. The facility has been built with tremendous support from volunteers and the local school district. We have received an IDEAS grant to provide teacher training workshops which will allow K-12 schools in northern Colorado to make use of the Little Thompson Observatory, including remote observing from classrooms.

  16. North Fork John Day Dredge Tailings Restoration Project Final Report 1997-2002.

    SciTech Connect

    Sanchez, John A.

    2002-12-01

    The USDA Forest Service (USFS) and the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) worked together to rehabilitate 2.1 miles of Clear Creek floodplain, a tributary of the North Fork John Day River Basin. Dredge tailing were deposited from mining operations on Clear Creek's floodplain from the 1930's to the 1950's. These tailing confined the stream channel and degraded the floodplain. The work was completed by moving dredge tailing piles adjacent to the Clear Creek channel, using track-mounted excavators and dump trucks. A caterpillar tractor was used to contour the material placed outside the immediate floodplain, blending it into the hillside. The restored floodplain was very near channel bankfull level following excavation and contoured to accept future flood flows. Monitoring was initiated through pre and post-project photo points and cross-section measurements. Work was completed in two efforts. In 1997 and 1998 floodplain restoration was adjacent to the reconstruction of Road 13 from the junction with Road 10 from Clear Creek River Mile 1.9 to 3.1 for a distance of 1.2 miles. In 1999 the Environmental Assessment for Lower Clear Creek--Granite Creek Floodplain Restoration Project was completed for work proposed on Clear Creek from the mouth up to River mile 1.9 and the Granite Creek floodplain from River miles 5.9 to 7.7. Restoration proposed in the 1999 Environmental Assessment is the subject of this report.

  17. Waste Management Plan for the Lower East Fork Poplar Creek Remedial Action Project Oak Ridge, Tennessee

    SciTech Connect

    1996-08-01

    The Lower East Fork Poplar Creek (LEFPC) Remedial Action project will remove mercury-contaminated soils from the floodplain of LEFPC, dispose of these soils at the Y-12 Landfill V, and restore the affected floodplain upon completion of remediation activities. This effort will be conducted in accordance with the Record of Decision (ROD) for LEFPC as a Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) action. The Waste Management Plan addresses management and disposition of all wastes generated during the remedial action for the LEFPC Project Most of the solid wastes will be considered to be sanitary or construction/demolition wastes and will be disposed of at existing Y-12 facilities for those types of waste. Some small amounts of hazardous waste are anticipated, and the possibility of low- level or mixed waste exists (greater than 35 pCi/g), although these are not expected. Liquid wastes will be generated which will be sanitary in nature and which will be capable of being disposed 0214 of at the Oak Ridge Sewage Treatment Plant.

  18. 2. PLANK COVERED BRANCH FLUME ON THE SOUTH FORK OF ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. PLANK COVERED BRANCH FLUME ON THE SOUTH FORK OF THE TULE RIVER MIDDLE FORK AND CONCRETE DIVERSION DAM SPILLING WATER. VIEW TO SOUTHEAST. - Tule River Hydroelectric Project, Water Conveyance System, Middle Fork Tule River, Springville, Tulare County, CA

  19. South Fork Tolt River Hydroelectric Project : Adopted Portions of a 1987 Federal Energy Regulatory Commission`s Final Environmental Impact Statement.

    SciTech Connect

    United States. Bonneville Power Administration.

    1992-07-01

    The South Fork Tolt River Hydroelectric Project that world produce 6.55 average megawatts of firm energy per year and would be sited in the Snohomish River Basin, Washington, was evaluated by the Federal Energy Regulatory commission (FERC) along with six other proposed projects for environmental effects and economic feasibility Based on its economic analysis and environmental evaluation of the project, the FERC staff found that the South Fork Tolt River Project would be economically feasible and would result in insignificant Impacts if sedimentation issues could be resolved. Upon review, the BPA is adopting portions of the 1987 FERC FEIS that concern the South Fork Tolt River Hydroelectric Project and updating specific sections in an Attachment.

  20. Interview with Sandra Thompson.

    ERIC Educational Resources Information Center

    Huang, Chiung-chih

    1994-01-01

    Presents an interview of Sandra Thompson on various topics relating to the Chinese language. The interview touches on conversational data on Chinese, the lack of morphological complexity in Mandarin Chinese, and the development of Chinese functionalism. (12 references) (CK)

  1. Wildlife and Wildlife Habitat Loss Assessment at Dexter Dam and Reservoir Project, Middle Fork Willamette River, Oregon, 1985 Final Report.

    SciTech Connect

    Noyes, J.H.

    1985-09-01

    A habitat based assessment was conducted of the US Army Corps of Engineers' Dexter Dam and Reservoir Project on the Middle Fork Willamette River, Oregon, to determine losses or gains resulting from the development and operation of the project. Preconstruction, post-construction, and recent vegetation cover types of the project site were mapped based on aerial photographs from 1944, 1956, and 1979, respectively. Vegetation cover types were identified within the affected area and acreages of each type at each period were determined. Fifteen wildlife target species were selected to represent a cross-section of species groups affected by the project. An interagency team evaluated the suitability of the habitat to support the target species at each time period. An evaluation procedure which accounted for both the quantity and quality of habitat was used to aid in assessing impacts resulting from the project. The Dexter Project extensively altered or affected 4662 acres of land and river in the Middle Fork Willamette River drainage. Impacts to wildlife centered around the loss of 445 acres of riparian habitat. Impacts resulting from the Dexter Project included the loss of year-round habitat for black-tailed deer, red fox, mink, beaver, western gray squirrel, ruffed grouse, ring-necked pheasant, California quail, wood duck and nongame species. Bald eagle, osprey, and greater scaup were benefitted by an increase in foraging habitat. The potential of the affected area to support wildlife was greatly altered as a result of the Dexter Project. Losses or gains in the potential of the habitat to support wildlife will exist over the life of the project.

  2. Arsenic Removal from Drinking Water by Coagulation/Filtration U.S. EPA Demonstration Project at City of Three Forks, MT, Final Performance Evaluation Report

    EPA Science Inventory

    This report documents the activities performed during and the results obtained from the arsenic removal treatment technology demonstration project at the City of Three Forks, MT facility. The objectives of the project were to evaluate: 1) the effectiveness of Kinetico’s FM-248-A...

  3. Best management practices plan for the Lower East Fork Poplar Creek remedial action project, Oak Ridge, Tennessee

    SciTech Connect

    1996-08-01

    The U.S. Department of Energy (DOE) has three major operating facilities on the DOE Oak Ridge Reservation (ORR) in Oak Ridge, Tennessee: the Oak Ridge Y-12 Plant, the K-25 Site, and the Oak Ridge National Laboratory (ORNL) managed by Lockheed Martin Environmental Research Corporation. All facilities are managed by Lockheed Martin Energy Systems, Incorporated (Energy Systems) for the DOE. The Y-12 Plant is adjacent to the city of Oak Ridge and is also upstream from Oak Ridge along East Fork Poplar Creek. The portion of the creek downstream from the Y-12 Plant is Lower East Fork Poplar Creek (LEFPC). This project will remove mercury-contaminated soils from the LEFPC floodplain, transport the soils to Industrial Landfill V (ILF-V), and restore any affected areas. This project contains areas that were designated in 1989 as a Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) site. The site includes DOE property and portions of commercial, residential, agricultural, and miscellaneous areas within the city of Oak Ridge.

  4. South Fork Zumbro River Stage 1B, Rochester, Minnesota. Design Memorandum Number 2, Flood Control Project

    DTIC Science & Technology

    1987-02-01

    Softb AMuchy, lack G M S, Very Dense, Block /00 Bo. 970 =_ Loose, Black-Gray 001, Very Dense, Tan -Gray 20 Very SofC Block TeO of Bedrock 2 , •MI P/a...Env cae,•,+,"’ epd ~-TaP ay. Dwq. 86 -1034e /0 May 49S6 :WS 9743 1 Water I To- of Bedrok -970 3 A/oaes: J .960 I/ ..Fork Zunbro River eev. 974.3: 2. ft

  5. Maxine M. Thompson - Dedication

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This manuscript summarizes the research career of Dr. Maxine M. Thompson, world renown horticulturist, plant breeder, and plant explorer. She became the first women professor at the Oregon State University, Deparment of Horticulture. She studied Rubus cytology and genetics and floral development in ...

  6. Wildlife and Wildlife Habitat Loss Assessment at Green Peter-Foster Project; Middle Fork Santiam River, Oregon, 1985 Final Report.

    SciTech Connect

    Noyes, J.H.

    1986-02-01

    A habitat based assessment was conducted of the US Army Corps of Engineers' Green Peter-Foster Dam and Reservoir Project on the Middle Fork Santiam River, Oregon, to determine losses or gains resulting from the development and operation of the hydroelectric related components of the project. Preconstruction, postconstruction, and recent vegetation cover types at the project site were mapped based on aerial photographs from 1955, 1972, and 1979, respectively. Vegetation cover types were identified within the affected area and acreages of each type at each period were determined. Eleven wildlife target species were selected to represent a cross-section of species groups affected by the project. An interagency team evaluated the suitability of the habitat to support the target species at each time period. An evaluation procedure which accounted for both the quantity and quality of habitat was used to aid in assessing impacts resulting from the project. The Green Peter-Foster Project extensively altered or affected 7873 acres of land and river in the Santiam River drainage. Impacts to wildlife centered around the loss of 1429 acres of grass-forb vegetation, 768 acres of shrubland, and 717 acres of open conifer forest cover types. Impacts resulting from the Green Peter-Foster Project included the loss of critical winter range for black-tailed deer and Roosevelt elk, and the loss of year-round habitat for deer, upland game birds, river otter, beaver, pileated woodpecker, and many other wildlife species. Bald eagle and osprey were benefited by an increase in foraging habitat. The potential of the affected area to support wildlife was greatly altered as a result of the Green Peter-Foster Project. Losses or gains in the potential of the habitat to support wildlife will exist over the life of the project.

  7. James R. Thompson

    NASA Technical Reports Server (NTRS)

    1986-01-01

    James R. Thompon served as director of the Marshall Space Flight Center from September 29, 1986 until July 6, 1989, when he was appointed as NASA Deputy Administrator. Prior to his tenure as Marshall's Director, Thompson served from March to June 1986 as the vice-chairman of the NASA task force investigating the cause of the Space Shuttle Challenger accident. He was credited with playing a significant role in returning the Space Shuttle to flight following the Challenger disaster.

  8. Confederated Tribes of the Umatilla Indian Reservation North Fork John Day River Basin Anadromous Fish Enhancement Project, Annual Report for FY 2000.

    SciTech Connect

    Macy, Tom L.; James, Gary A.

    2003-03-01

    The CTUIR North Fork John Day River Basin Anadromous Enhancement Project (NFJDAFEP) identified and prioritized stream reaches in The North Fork John day River basin for habitat improvements during the 2000 project period. Public out reach was emphasized during this first year of the project. We presented multiple funding and enhancement options to landowners. We concentrated on natural recovery methods, riparian fencing and off-stream livestock water developments. Under this BPA contract four riparian easements were signed protecting almost 5 miles of tributary streams. There are nine offstream water developments associated with these easements. Some landowners chose to participate in other programs based on Tribal outreach efforts. Two landowners chose NRCS programs for enhancement and one chose OWEB as a funding source. Two landowners implemented there own enhancement measures protecting 3 miles of stream. Cooperation between the NRCS/FSA/SWCDs and the Tribe to create joint projects and develop alternative funding scenarios for riparian enhancement was a major effort. The Tribe also worked with the North Fork John Day Watershed Council, USFS and ODFW to coordinate projects and support similar projects throughout the John Day Basin. We provided input to the John Day Summary prepared for the NWPPC by ODFW. The Tribe worked with the Umatilla National Forest on the Clear Creek Dredgetailings Rehabilitation project and coordinated regularly with USFS Fisheries, Hydrology and Range staff.

  9. Confederated Tribes of the Umatilla Indian Reservation North Fork John Day River Basin Anadromous Fish Enhancement Project, Annual Report for FY 2001.

    SciTech Connect

    Macy, Tom L.; James, Gary A.

    2003-03-01

    The CTUIR North Fork John Day River Basin Anadromous Enhancement Project (NFJDAFEP) identified and prioritized stream reaches in The North Fork John day River basin for habitat improvements during the 2000 project period. Public outreach was emphasized during this first year of the project. During the past year we concentrated on satisfying landowner needs, providing cost share alternatives, providing joint projects and starting implementation. We presented multiple funding and enhancement options to landowners. We concentrated on natural recovery methods, riparian fencing and offstream livestock water developments. Under this BPA contract four riparian easements have been signed protecting almost 5 miles of tributary streams. There are nine offstream water developments associated with these easements. Some landowners chose to participate in other programs based on Tribal outreach efforts. Some landowners chose NRCS programs for enhancement and others chose OWEB as a funding source. The exact amount of stream protection due to other funding sources probably exceeds that by BPA, however most would not have entered any program without initial Tribal outreach. Cooperation between the NRCS/FSA/SWCDs and the Tribe to create joint projects and develop alternative funding scenarios for riparian enhancement was a major effort. The Tribe also worked with the North Fork John Day Watershed Council, USFS and ODFW to coordinate projects and support similar projects throughout the John Day Basin.

  10. Solar project description for Design Construction Association single family dwelling, Big Fork, Montana

    NASA Astrophysics Data System (ADS)

    1980-04-01

    A solar energy system was installed in a 2100 sq ft house located in Big Fork, Montana. The system is designed to provide solar energy for heating and domestic hot water. Solar energy is collected by flat plate collectors with a gross area of 792 square feet. The collector banks are mounted on the roof of the house and face due south at an angle of 45 deg to the horizontal optimizing solar energy collection. Solar energy is transferred from the collector array to a 1500 gallon storage tank. Water is used as the heat collection, transfer and storage medium. Freeze protection is provided by use of a drain down system. Space heating demands are met by circulating hot water from storage through baseboard units in the distribution system of the house. Auxiliary space heating is provided by an electrical heating element in the boiler. Similarly, an electrical heating element in the DHW tank provides energy for water heating. The dwelling was fully instrumented for performance evaluation since October 1977 and the data is integrated into the National Solar Data Network.

  11. Summary of environmental flow monitoring for the Sustainable Rivers Project on the Middle Fork Willamette and McKenzie Rivers, western Oregon, 2014–15

    USGS Publications Warehouse

    Jones, Krista L.; Mangano, Joseph F.; Wallick, J. Rose; Bervid, Heather D.; Olson, Melissa; Keith, Mackenzie K.; Bach, Leslie

    2016-11-07

    This report presents the results of an ongoing environmental flow monitoring study by The Nature Conservancy (TNC), U.S. Army Corps of Engineers (USACE), and U.S. Geological Survey in support of the Sustainable Rivers Project (SRP) of TNC and USACE. The overarching goal of this study is to evaluate and characterize relations between streamflow, geomorphic processes, and black cottonwood (Populus trichocarpa) recruitment on the Middle Fork Willamette and McKenzie Rivers, western Oregon, that were hypothesized in earlier investigations. The SRP can use this information to plan future monitoring and scientific investigations, and to help mitigate the effects of dam operations on streamflow regimes, geomorphic processes, and biological communities, such as black cottonwood forests, in consultation with regional experts. The four tasks of this study were to:Compare the hydrograph from Water Year (WY) 2015 with hydrographs from WYs 2000–14 and the SRP flow recommendations,Assess short-term and system-wide changes in channel features and vegetation throughout the alluvial valley section of the Middle Fork Willamette River (2005–12),Examine changes in channel features and vegetation over two decades (1994–2014) for two short mapping zones on the Middle Fork Willamette and McKenzie Rivers, andComplete a field investigation of summer stage and the growth of black cottonwood and other vegetation on the Middle Fork Willamette and McKenzie Rivers in summer 2015.

  12. EPA Region 10 Climate Change and TMDL Pilot Project - South Fork Nooksack River, Washington

    EPA Science Inventory

    The U.S. Environmental Protection Agency (EPA) Region 10 and EPA’s Office of Research and Development (ORD) and Office of Water (OW) have launched a pilot research project to consider how projected climate change impacts could be incorporated into a TMDL and influence restoration...

  13. Along Middle Fork Road toward North Fork of the Crazy ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Along Middle Fork Road toward North Fork of the Crazy Woman Creek Bridge, view to west - North Fork of Crazy Woman Creek Bridge, Spanning North Fork of Crazy Woman Creek at Middle Fork Road, Buffalo, Johnson County, WY

  14. 15. INSIDE VIEW OF FLUME, LOOKING DOWNSTREAM, LEFT FORK TO ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    15. INSIDE VIEW OF FLUME, LOOKING DOWNSTREAM, LEFT FORK TO SETTLING BASIN, SHOWING RIGHT FORK WITH GATE IN PLACE AND A FEW NEEDLES IN PLACE - Electron Hydroelectric Project, Along Puyallup River, Electron, Pierce County, WA

  15. Value engineering study report on Lower East Fork Poplar Creek Project. Alternative No. 3

    SciTech Connect

    1995-08-01

    The project under study is Alternative No. 3 as identified in the Feasibility Study dated August 1994. This alternative is identified as Excavation and Disposal of Commercial/DOE, Other, and Residential Remedial Unit Soil. The assumptions used for generating baseline costs are discussed in site associated costs. It is further described as follows: Soils with mercury concentrations greater than 200 ppM in the Commercial/DOE and Other Remedial Units and greater than 180 ppM in the Residential Remedial Unit [41,300m{sup 3} (54,000yd{sup 3} a volume equivalent to approximately 6,750 dump truck loads)] would be excavated and disposed of in an approved, lined landfill at Y-12 with leachate collection and possible pretreatment of the leachate before discharge. Because 0.6 ha (1.5 acres) of wetland would be destroyed, wetlands banking would occur, whereby a 1.8-ha (4.5-acre) wetland would be constructed on DOE-owned land near K-25. Borrow soil would be obtained from the Y-12 West End Borrow Area or from excess soil located at Y-12 landfills to fill the excavation. It is estimated that 7.3 ha (18.2 acres, and area about the size of 17 football fields) of habitat would be adversely affected. This alternative would use BMPs to minimize any adverse affects and to comply substantively with regulatory requirements.

  16. Wildlife and Wildlife Habitat Loss Assessment Summary at Lookout Point Dam and Reservoir Project, Middle Fork Willamette River, Oregon; 1985 Final Report.

    SciTech Connect

    Bedrossian, K.L.; Noyes, J.H.

    1985-09-01

    A habitat based assessment was conducted of the US Army Corps of Engineers' Lookout Point Dam and Reservoir Project on the Middle Fork Willamette River, Oregon, to determine losses or gains resulting from development and operation of the hydroelectric related components of the project. Preconstruction, postconstruction, and recent vegetation cover types of the project site were mapped based on aerial photographs from 1944, 1956, and 1979, respectively. Vegetation cover types were identified within the affected area and acreages of each type at each period were determined. Seventeen wildlife target species were selected to represent a cross-section of species groups affected by the project. An interagency team evaluated the suitability of the habitat to support the target species at each time period. An evaluation procedure which accounted for both the quantity and quality of habitat was used to aid in assessing impacts resulting from the project. The Lookout Point Project extensively altered or affected 6790 acres of land and river in the Middle Fork Willamette River drainage. Impacts to wildlife centered around the loss of 724 acres of old-growth conifer forest and 118 acres of riparian habitat. Impacts resulting from the Lookout Point Project included the loss of winter range for Roosevelt elk, and the loss of year-round habitat for black-tailed deer, western gray squirrel, red fox, mink, beaver, ruffed grouse, ring-necked pheasant, California quail, spotted owl, and other nongame species. Bald eagle and osprey were benefitted by an increase in foraging habitat. The potential of the affected area to support wildlife was greatly altered as a result of the Lookout Point Project. Loses or gains in the potential of the habitat to support wildlife will exist over the life of the project.

  17. Wildlife and Wildlife Habitat Loss Assessment at Hills Creek Dam and Reservoir Project, Middle Fork Willamette River, Oregon, 1985 Final Report.

    SciTech Connect

    Noyes, J.H.

    1985-09-01

    A habitat based assessment was conducted of the US Army Corps of Engineers' Hills Creek Dam and Reservoir Project on the Middle Fork Willamette River, Oregon, to determine losses or gains resulting from the development and operation of the hydroelectric related components of the project. Preconstruction, postconstruction, and recent vegetation cover types of the project site were mapped based on aerial photographs from 1944, 1964, and 1979, respectively. Vegetation cover types were identified within the affected area and acreages of each type at each period were determined. Fifteen wildlife target species were selected to represent a cross-section of species groups affected by the project. An interagency team evaluated the suitability of the habitat to support the target species at each time period. An evaluation procedure which accounted for both the quantity and quality of habitat was used to aid in assessing impacts resulting from the project. The Hills Creek Project extensively altered or affected 4662 acres of land and river in the Middle Fork Willamette River drainage. Impacts to wildlife centered around the loss of 2694 acres of old-growth forest and 207 acres of riparian habitat. Impacts resulting from the Hills Creek Project included the loss of winter range for Roosevelt elk, and the loss of year-round habitat for black-tailed deer, black bear, cougar, river otter, beaver, ruffed grouse, spotted owl, and other nongame species. Bald eagle and osprey were benefited by an increase in foraging habitat. The potential of the affected area to support wildlife was greatly altered as a result of the Hills Creek Project, losses or gains in the potential of the habitat to support wildlife will exist over the life of the project.

  18. An archaeological reconnaissance of a 14 mile section of the East Fork Poplar Creek for the Environmental Restoration Project, Anderson and Roane Counties, Tennessee

    SciTech Connect

    DuVall, G.D.

    1993-01-01

    At the request of the US Army Corps of Engineers, Nashville District, Nashville, Tennessee, an archaeological reconnaissance of the potential impact areas of the Environmental Restoration Project (ERP) along the East Fork Poplar Creek was conducted during the period December 16, 1991, and March 3, 1992. The reconnaissance was conducted in response to environmental evaluations as a result of the accidental spillage of approximately 293,000 pounds of mercury, radionuclides, heavy metals and other compounds. The reconnaissance to assess adverse impacts to cultural resources located within the boundaries of Federally-licensed, permitted, funded or assisted projects was conducted in compliance with the National Historic Preservation Act of 1966, National Environmental Policy Act of 1969 and Executive Order 11593.

  19. 1976 Big Thompson flood, Colorado

    USGS Publications Warehouse

    Jarrett, R. D.; Vandas, S.J.

    2006-01-01

    In the early evening of July 31, 1976, a large stationary thunderstorm released as much as 7.5 inches of rainfall in about an hour (about 12 inches in a few hours) in the upper reaches of the Big Thompson River drainage. This large amount of rainfall in such a short period of time produced a flash flood that caught residents and tourists by surprise. The immense volume of water that churned down the narrow Big Thompson Canyon scoured the river channel and destroyed everything in its path, including 418 homes, 52 businesses, numerous bridges, paved and unpaved roads, power and telephone lines, and many other structures. The tragedy claimed the lives of 144 people. Scores of other people narrowly escaped with their lives. The Big Thompson flood ranks among the deadliest of Colorado's recorded floods. It is one of several destructive floods in the United States that has shown the necessity of conducting research to determine the causes and effects of floods. The U.S. Geological Survey (USGS) conducts research and operates a Nationwide streamgage network to help understand and predict the magnitude and likelihood of large streamflow events such as the Big Thompson Flood. Such research and streamgage information are part of an ongoing USGS effort to reduce flood hazards and to increase public awareness.

  20. Grand Forks - East Grand Forks Urban Water Resources Study. Social and Environmental Inventory.

    DTIC Science & Technology

    1979-01-01

    Utilities 107-108 FIGUR~ES Figure Number Title Pag 14 Projected Population - Region 67 1 5 Projected Population - Grand Forks County 68 Study Area 16...Projected Population - Polk County Study Area 68 17 Planning Regions 105 TABLES Tale Number Title Pg 21 Historic Sites in the Grand Forks Area 61I 22...of Indians, traders and settlers; and those related to the populations which currently reside in the area. The information on archeology and history

  1. Thompson receives 1994 Bowen award

    NASA Astrophysics Data System (ADS)

    Green, David H.; Thompson, Alan Bruce

    At the Spring Meeting in Baltimore, May 23, 1994, Alan Bruce Thompson of the Eidgenossiche Technische Hochschule, Zurich, received the 1994 N. L. Bowen Award of the Volcanology, Geochemsitry, and Petrology section, which is given for a single outstanding contribution to volcanology, geochemistry, or petrology made during the preceding 5 years. The award was presented by David H. Green of the Research School of Earth Sciences. The citation and response are given here.

  2. Wildlife and Wildlife Habitat Loss Assessment at Cougar Dam and Reservoir Project, South Fork McKenzie River, Oregon; 1985 Final Report.

    SciTech Connect

    Noyes, J.H.

    1985-09-01

    A habitat based assessment was conducted of the US Army Corps of Engineers' Cougar Dam and Reservoir Project on the South Fork McKenzie River, Oregon, to determine losses or gains resulting from the development and operation of the hydroelectric related components of the project. Preconstruction, postconstruction, and recent vegetation cover types of the project site were mapped based on aerial photographs from 1953, 1965, and 1979, respectively. Vegetation cover types were identified within the affected area and acreages of each type at each period were determined. Fifteen wildlife target species were selected to represent a cross-section of species groups affected by the project. An interagency team evaluated the suitability of the habitat to support the target species at each time period. An evaluation procedure which accounted for both the quantity and quality of habitat was used to aid in assessing impacts resulting from the project. The Cougar Project extensively altered or affected 3096 acres of land and river in the McKenzie River drainage. Impacts to wildlife centered around the loss of 1587 acres of old-growth conifer forest and 195 acres of riparian hardwoods. Impacts resulting from the Cougar Project included the loss of winter range for Roosevelt elk, and the loss of year-round habitat for black-tailed deer, black bear, cougar, river otter, beaver, spotted owl, and other nongame species. Bald eagle and osprey were benefited by an increase in foraging habitat. The potential of the effected area to support wildlife was greatly altered as a result of the Cougar Project. Loses or grains in the potential of the habitat to support wildlife will exist over the life of the project.

  3. Intraoperative value of the thompson test.

    PubMed

    Cuttica, Daniel J; Hyer, Christopher F; Berlet, Gregory C

    2015-01-01

    The purpose of the present study was to assess the validity of the Thompson sign and determine whether the deep flexors of the foot can produce a falsely intact Achilles tendon.Ten unmatched above-the-knee lower extremity cadaveric specimens were studied. In group 1, the Achilles tendon was sectioned into 25% increments. The Thompson maneuver was performed after each sequential sectioning of the Achilles tendon, including after it had been completely sectioned. If the Thompson sign was still intact after complete release of the Achilles tendon, we proceeded to release the tendon, and tendon flexor hallucis longus, flexor digitorum longus, and posterior tibial tendons. The Thompson test was performed after the release of each tendon. In group 2, the tendon releases were performed in a reverse order to that of group 1, with the Thompson test performed after each release. In group 1, the Thompson sign remained intact in all specimens after sectioning of 25%, 50%, and 75% of the tendon. After complete (100%) release of the tendon, the Thompson sign was absent in all specimens. In group 2, the Thompson sign remained intact after sectioning of the posterior tibial, flexor digitorum longus, and flexor hallucis longus tendons in all specimens. The Thompson sign remained intact in all specimens after sectioning of 25%, 50%, and 75% of the Achilles tendon. After complete release of the tendon, the Thompson sign was absent in all specimens.The Thompson test is an accurate clinical test for diagnosing complete Achilles tendon ruptures. However, it might not be a useful test for diagnosing partial Achilles tendon ruptures. Our findings also call into question the usefulness of the Thompson test in the intraoperative setting.

  4. The Little Thompson Observatory's Astronomy Education Programs

    NASA Astrophysics Data System (ADS)

    Schweitzer, Andrea E.

    2007-12-01

    The Little Thompson Observatory is a community-built E/PO observatory and is a member of the Telescopes in Education (TIE) project. The observatory is located on the grounds of Berthoud High School in northern Colorado. Annually we have approximately 5,000 visitors, which is roughly equal to the population of the small town of Berthoud, CO. This past year, we have used the funding from our NASA ROSS E/PO grant to expand our teacher workshop programs, and included the baseball-sized meteorite that landed in Berthoud three years ago. Our teacher programs have involved scientists from the Southwest Research Institute and from Fiske Planetarium at CU-Boulder. We thank the NASA ROSS E/PO program for providing this funding! We also held a Colorado Project ASTRO-GEO workshop, and the observatory continues to make high-school astronomy courses available to students from the surrounding school districts. Statewide, this year we helped support the development and construction of three new educational observatories in Colorado, located in Estes Park, Keystone, and Gunnison. The LTO is grateful to have received the recently-retired 24-inch telescope from Mount Wilson Observatory as part of the TIE program. To provide a new home for this historic telescope, we have doubled the size of the observatory and are building a second dome (all with volunteer labor). During 2008 we plan to build a custom pier and refurbish the telescope.

  5. Forks in the Road: The Many Paths of Arts Alumni--Strategic National Arts Alumni Project 2010 Findings

    ERIC Educational Resources Information Center

    Strategic National Arts Alumni Project, 2011

    2011-01-01

    More than 120,000 visual and performing arts degrees are granted each year (Americans for the Arts, 2010) and stereotypes abound about what happens to these people. One common view is that few make a living doing art and are dissatisfied with their education and career opportunities. Findings from the Strategic National Arts Alumni Project (SNAAP)…

  6. Philip Thompson: Pages from a Scientist's Life.

    NASA Astrophysics Data System (ADS)

    Lewis, John M.

    1996-01-01

    Philip Thompson (1922-94) pioneered innovative approaches to weather analysis and prediction that blended determinism and probability. He generally posed problems in terms of simplified dynamics that were amenable to analytic solution. His preciseness in problem formulation and presentation in a forceful didactical manner are linked to his early home-schooling and experiences with a coterie of young intellectuals. Four of Thompson's contributions are examined with the intention of highlighting their impact on the current state of operational analysis and prediction.

  7. The Little Thompson Observatory's Astronomy Education Programs

    NASA Astrophysics Data System (ADS)

    Schweitzer, Andrea E.

    2008-05-01

    The Little Thompson Observatory is a community-built E/PO observatory and is a member of the Telescopes in Education (TIE) project. The observatory is located on the grounds of Berthoud High School in northern Colorado. Annually we have approximately 5,000 visitors, which is roughly equal to the population of the small town of Berthoud, CO. In spring 2008, we offered a special training session to boost participation in the GLOBE at Night international observing program. During 2005-2007 we used the funding from our NASA ROSS E/PO grant to expand our teacher workshop programs, and included the baseball-sized meteorite that landed in Berthoud four years ago. Our teacher programs are ongoing, and include scientists from the Southwest Research Institute and from Fiske Planetarium at CU-Boulder. We thank the NASA ROSS E/PO program for providing this funding! Statewide, we are a founding member of Colorado Project ASTRO-GEO, and the observatory offers high-school astronomy courses to students from the surrounding school districts. We continue to support the development and construction of three new educational observatories in Colorado, located in Estes Park, Keystone and Gunnison. The LTO is grateful to have received the retired 24-inch telescope from Mount Wilson Observatory as part of the TIE program. To provide a new home for this historic telescope, we have doubled the size of the observatory and are building a second dome (almost all construction done with volunteer labor). During 2008 we will be building a custom pier and refurbishing the telescope.

  8. Gus Grissom & Milt Thompson With Paresev

    NASA Technical Reports Server (NTRS)

    1962-01-01

    The Paresev 1-A standing Rogers Dry Lakebed at the NASA Flight Research Center, Edwards, California. Mercury Astronaut Gus Grissom is at left and NASA test pilot Milton Thompson is at right. The Paresev evaluated a potential replacement for parachutes used on spacecraft. The Paresev was steerable and was evaluated for use on the Gemini spacecraft. The idea was not workable, however.

  9. A Reply? A Response to Penny Thompson

    ERIC Educational Resources Information Center

    Doble, Peter

    2007-01-01

    Penny Thompson's "reply" to the author's article (Doble, 2005) briefly tells readers that for an answer to some of the author's queries, readers may turn to her book; for the rest, she proposes to take "the argument" further. One of the problems with her earlier article was that it had no discernible argument, so it is not easy to see how it may…

  10. Teacher Hiring, Support and Evaluation in Thompson School District, CO. Executive Summary

    ERIC Educational Resources Information Center

    New Teacher Project, 2008

    2008-01-01

    In the spring of 2008, The New Teacher Project (TNTP) partnered with the Thompson School District (TSD) in Loveland, Colorado, to analyze current teacher staffing practices in the district and make recommendations to further build the concentration of highly effective teachers in TSD schools. TNTP's analysis of policy and practice in TSD…

  11. 1. View of Clark Fork Vehicle Bridge facing west. Panorama ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. View of Clark Fork Vehicle Bridge facing west. Panorama showing the entire span of bridge from north shore of the Clark Fork River. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  12. 3. View of Clark Fork Vehicle Bridge facing southwest. Bridge ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    3. View of Clark Fork Vehicle Bridge facing southwest. Bridge from north shore of Clark Fork River. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  13. 7. View of Clark Fork Vehicle Bridge facing northwest. Bridge ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    7. View of Clark Fork Vehicle Bridge facing northwest. Bridge from south shore of Clark Fork River showing 4 1/2 spans. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  14. 4. View of Clark Fork Vehicle Bridge facing northeast. Bridge ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    4. View of Clark Fork Vehicle Bridge facing northeast. Bridge from south shoreof Clark Fork River showing 4 spans. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  15. 2. View of Clark Fork Vehicle Bridge facing northeast. Bridge ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. View of Clark Fork Vehicle Bridge facing northeast. Bridge from south shore of Clark Fork River showing 4 1/2 spans. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  16. Needs assessment for the Greenway Grand Forks-East Grand Forks development and public education

    NASA Astrophysics Data System (ADS)

    Munski, Laura

    Following the flood of 1997, the U.S. Army Corps of Engineers included the Greenway Grand Forks---East Grand Forks (the Greenway) as a flood control measure for Grand Forks, North Dakota and East Grand Forks, Minnesota. It extends along both the Red River of the North and the Red Lake River, encompassing 2200 acres of land. The cities of Grand Forks and East Grand Forks hired consultants to assist with the postflood planning process. The planning process culminated with the Red River of the North Greenway Final Report (Flink, 1998). The purpose of this study was to determine if the development of the Greenway addressed the objectives of the planning report. The history of the land adjacent to the rivers was reviewed to document the progression of riverfront development. Anecdotal evidence was collected, field observations were made, city council minutes were reviewed, Greenway Technical Committee members were interviewed, Greenway Technical Committee minutes were reviewed, and the Greenway Grand Forks---East Grand Forks survey results were reviewed to determine if the objectives of the Red River of the North Greenway Final Report were addressed. A cross section survey was designed by Laura Munski for this dissertation research. The survey was approved by the Greenway Technical Committee. The survey collected both quantitative and qualitative data from the community. The purpose of the survey portion of the research project was to ascertain how residents were kept informed of activities on the Greenway and what amenities residents were using on the Greenway and to solicit their comments regarding the Greenway. The results of the survey research were used in both marketing and event planning for the Greenway. The singular qualitative survey question gave respondents an opportunity to share their comments regarding the Greenway. The qualitative data analysis provided insight to the amenities and educational programs desired by respondents, their concerns regarding the

  17. 76 FR 50171 - Notice of Intent To Prepare an Environmental Impact Statement for the Henrys Fork Salinity...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-12

    ... the Henrys Fork Salinity Control Project Plan, Sweetwater and Uinta Counties, WY; Daggett and Summit... Statement (EIS) for the Henrys Fork Salinity Control Project Plan (SCPP). The NRCS will be the lead agency... Improvements'' alternative assumes a salinity control project will be implemented. Existing financial...

  18. Tuning Forks and Monitor Screens.

    ERIC Educational Resources Information Center

    Harrison, M. A. T.

    2000-01-01

    Defines the vibrations of a tuning fork against a computer monitor screen as a pattern that can illustrate or explain physical concepts like wave vibrations, wave forms, and phase differences. Presents background information and demonstrates the experiment. (Author/YDS)

  19. Aeronautical Research Engineer Milt Thompson computing data

    NASA Technical Reports Server (NTRS)

    1956-01-01

    Milton O. Thompson was hired as an engineer at the National Advisory Committee for Aeronautics' High-Speed Flight Station (later renamed the National Aeronautics and Space Administration's Dryden Flight Research Center) on March 19, 1956. In 1958 he became a research pilot, but in this photo Milt is working on data from another pilot's research flight. Thompson began flying with the U.S. Navy as a pilot trainee at the age of 19. He subsequently served during World War II, with duty in China and Japan. Following six years of active naval service, he entered the University of Washington, in Seattle, Washington. Milt graduated in 1953 with a Bachelor of Science degree in Engineering. He remained in the Naval Reserves during college, and continued flying--not only naval aircraft but crop dusters and forest-spraying aircraft. After college graduation, Milt became a flight test engineer for the Boeing Aircraft Company in Seattle, where he was employed for two years before coming to the High-Speed Flight Station.

  20. Paresev in flight with pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1964-01-01

    This movie clip runs 37 seconds in length and begins with a shot from the chase plane of NASA Dryden test pilot Milt Thompson at the controls of the Paresev, then the onboard view from the pilot's seat and finally bringing the Paresev in for a landing on the dry lakebed at Edwards AFB. The Paresev (Paraglider Rescue Vehicle) was an indirect outgrowth of kite-parachute studies by NACA Langley engineer Francis M. Rogallo. In early 1960's the 'Rogallo wing' seemed an excellent means of returning a spacecraft to Earth. The delta wing design was patented by Mr. Rogallo. In May 1961, Robert R. Gilruth, director of the NASA Space Task Group, requested studies of an inflatable Rogallo-type 'Parawing' for spacecraft. Several companies responded; North American Aviation, Downey, California, produced the most acceptable concept and development was contracted to that company. In November 1961 NASA Headquarters launched a paraglider development program, with Langley doing wind tunnel studies and the NASA Flight Research Center supporting the North American test program. The North American concept was a capsule-type vehicle with a stowed 'parawing' that could be deployed and controlled from within for a landing more like an airplane instead of a 'splash down' in the ocean. The logistics became enormous and the price exorbitant, plus NASA pilots and engineers felt some baseline experience like building a vehicle and flying a Parawing should be accomplished first. The Paresev (Paraglider Research Vehicle) was used to gain in-flight experience with four different membranes (wings), and was not used to develop the more complicated inflatable deployment system. The Paresev was designed by Charles Richard, of the Flight Research Center Vehicle and System Dynamics Branch, with the rest of the team being: engineers, Richard Klein, Gary Layton, John Orahood, and Joe Wilson; from the Maintenance and Manufacturing Branch: Frank Fedor, LeRoy Barto; Victor Horton as Project Manager, with

  1. Paresev in flight with pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1964-01-01

    This movie clip runs 37 seconds in length and begins with a shot from the chase plane of NASA Dryden test pilot Milt Thompson at the controls of the Paresev, then the onboard view from the pilot's seat and finally bringing the Paresev in for a landing on the dry lakebed at Edwards AFB. The Paresev (Paraglider Rescue Vehicle) was an indirect outgrowth of kite-parachute studies by NACA Langley engineer Francis M. Rogallo. In early 1960's the 'Rogallo wing' seemed an excellent means of returning a spacecraft to Earth. The delta wing design was patented by Mr. Rogallo. In May 1961, Robert R. Gilruth, director of the NASA Space Task Group, requested studies of an inflatable Rogallo-type 'Parawing' for spacecraft. Several companies responded; North American Aviation, Downey, California, produced the most acceptable concept and development was contracted to that company. In November 1961 NASA Headquarters launched a paraglider development program, with Langley doing wind tunnel studies and the NASA Flight Research Center supporting the North American test program. The North American concept was a capsule-type vehicle with a stowed 'parawing' that could be deployed and controlled from within for a landing more like an airplane instead of a 'splash down' in the ocean. The logistics became enormous and the price exorbitant, plus NASA pilots and engineers felt some baseline experience like building a vehicle and flying a Parawing should be accomplished first. The Paresev (Paraglider Research Vehicle) was used to gain in-flight experience with four different membranes (wings), and was not used to develop the more complicated inflatable deployment system. The Paresev was designed by Charles Richard, of the Flight Research Center Vehicle and System Dynamics Branch, with the rest of the team being: engineers, Richard Klein, Gary Layton, John Orahood, and Joe Wilson; from the Maintenance and Manufacturing Branch: Frank Fedor, LeRoy Barto; Victor Horton as Project Manager, with

  2. Advocating for medical diplomacy: a conversation with Tommy G. Thompson.

    PubMed

    Thompson, Tommy G

    2004-01-01

    Health Affairs founding editor John Iglehart interviews HHS Secretary Tommy Thompson, who calls for closer integration of health policy and foreign policy, with the aim of improving the lives of vulnerable populations and serving the best interests of the United States. Thompson also discusses the indelible impressions of his travels to Afghanistan, Africa, and Iraq; the Medicare drug discount card program; and more.

  3. The Interpretive Approach to Religious Education: Challenging Thompson's Interpretation

    ERIC Educational Resources Information Center

    Jackson, Robert

    2012-01-01

    In a recent book chapter, Matthew Thompson makes some criticisms of my work, including the interpretive approach to religious education and the research and activity of Warwick Religions and Education Research Unit. Against the background of a discussion of religious education in the public sphere, my response challenges Thompson's account,…

  4. MSFC Director James R. Thompson in Control Room

    NASA Technical Reports Server (NTRS)

    1988-01-01

    Marshall's fifth Center Director, James R. Thompson (1986-1989), in the control room of the Solid Rocket Booster (SRB)automated thermal protection system (TPS) removal facility. Under Dr. Thompson's leadership, the shuttle program was rekindled after the Challenger explosion. Return to Flight kept NASA 's future programs alive.

  5. 22. View of Clark Fork Vehicle Bridge facing downwest side. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    22. View of Clark Fork Vehicle Bridge facing down-west side. Looking at road deck and vertical laced channel. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  6. 8. View of Clark Fork Vehicle Bridge facing southwest. Looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    8. View of Clark Fork Vehicle Bridge facing southwest. Looking at understructure of northernmost span. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  7. 11. View of Clark Fork Vehicle Bridge facing northwest. Southernmost ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    11. View of Clark Fork Vehicle Bridge facing northwest. Southernmost span. Plaque was originally located where striped traffic sign is posted. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  8. 21. View of Clark Fork Vehicle Bridge facing west. Looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    21. View of Clark Fork Vehicle Bridge facing west. Looking at bridge deck, guard rail, juncture of two bridge spans. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  9. 12. View of Clark Fork Vehicle Bridge facing south. Approach ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. View of Clark Fork Vehicle Bridge facing south. Approach from the north road. Plaque was originally located where striped traffic sign is posted. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  10. 18. View of Clark Fork Vehicle Bridge facing north. Looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    18. View of Clark Fork Vehicle Bridge facing north. Looking at north concrete abutment and timber stringers. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  11. 20. View of Clark Fork Vehicle Bridge facing up. Looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    20. View of Clark Fork Vehicle Bridge facing up. Looking at understructure of northernmost span. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  12. 19. View of Clark Fork Vehicle Bridge facing north. Looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    19. View of Clark Fork Vehicle Bridge facing north. Looking at north abutment and underside of northernmost span. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  13. NEW APPROACHES: Speed of sound in tuning fork metal

    NASA Astrophysics Data System (ADS)

    Narayanan, V. Anantha; Narayanan, Radha

    1996-11-01

    A procedure to find the speed of sound in tuning fork metal is described. The formula needed is extracted from the literature and explained. Since the equipment needed for this project is readily available in most high school and introductory level college science laboratories, this exercise can be done without any additional cost.

  14. Estimated Loads of Suspended Sediment and Selected Trace Elements Transported through the Milltown Reservoir Project Area Before and After the Breaching of Milltown Dam in the Upper Clark Fork Basin, Montana, Water Year 2008

    USGS Publications Warehouse

    Lambing, John H.; Sando, Steven K.

    2009-01-01

    This report presents estimated daily and cumulative loads of suspended sediment and selected trace elements transported during water year 2008 at three streamflow-gaging stations that bracket the Milltown Reservoir project area in the upper Clark Fork basin of western Montana. Milltown Reservoir is a National Priorities List Superfund site where sediments enriched in trace elements from historical mining and ore processing have been deposited since the construction of Milltown Dam in 1907. Milltown Dam was breached on March 28, 2008, as part of Superfund remedial activities to remove the dam and contaminated sediment that had accumulated in Milltown Reservoir. The estimated loads transported through the project area during the periods before and after the breaching of Milltown Dam, and for the entire water year 2008, were used to quantify the net gain or loss (mass balance) of suspended sediment and trace elements within the project area during the transition from a reservoir environment to a free-flowing river. This study was done in cooperation with the U.S. Environmental Protection Agency. Streamflow during water year 2008 compared to long-term streamflow, as represented by the record for Clark Fork above Missoula (water years 1930-2008), generally was below normal (long-term median) from about October 2007 through April 2008. Sustained runoff started in mid-April, which increased flows to near normal by mid-May. After mid-May, flows sharply increased to above normal, reaching a maximum daily mean streamflow of 16,800 cubic feet per second (ft3/s) on May 21, which essentially equaled the long-term 10th-exceedance percentile for that date. Flows substantially above normal were sustained through June, then decreased through the summer and reached near-normal by August. Annual mean streamflow during water year 2008 (3,040 ft3/s) was 105 percent of the long-term mean annual streamflow (2,900 ft3/s). The annual peak flow (17,500 ft3/s) occurred on May 21 and was 112

  15. Nutrient Loading and Algal Response in West Thompson Lake, Thompson, Connecticut, 2003-2005

    USGS Publications Warehouse

    Morrison, Jonathan; Colombo, Michael J.

    2008-01-01

    Water quality and nutrient loads were characterized for parts of the Quinebaug River and West Thompson Lake in northeastern Connecticut during 2003 to 2005. The West Thompson Lake watershed is a mainly forested watershed that receives treated municipal wastewater from several point sources in Massachusetts. The lake is a flood-control reservoir formed in 1966 by impoundment of the Quinebaug River. Median concentrations of total phosphorus in two inflow (upstream) and one outflow (downstream) sampling stations on the Quinebaug River were higher than the nutrient criteria recommended by the U.S. Environmental Protection Agency (USEPA) for rivers and streams in aggregate Ecoregion XIV. In general, concentrations of total phosphorus in West Thompson Lake also were above the nutrient criteria recommended by USEPA for lakes and impoundments in aggregate Ecoregion XIV. The trophic status of West Thompson Lake has changed since 1995 from a hypereutrophic lake to a eutrophic lake; however, the lake still has large algal blooms. These blooms are predominated by blue-green algae, with chlorophyll-a concentrations of more than 30 micrograms per liter and algal cell counts as high as 73,000 cells/mL. Water samples collected during the summer of 2005 identified phosphorus as the primary limiting nutrient early in the season, but algal growth is probably co-limited by phosphorus and nitrogen later in the season. Lake-bottom sediments were collected from several areas throughout the lake and ranged in thickness from less than 1 foot (ft) to more than 3 ft. Concentrations of phosphorus in sediments differed throughout the lake; the highest values were found in the middle of the lake. Concentrations of total phosphorus also increased from an average 1,800 milligrams per kilogram (mg/kg) in the upper layers of sediment to more than 6,000 mg/kg at depth in the sediment. Annual, seasonal, and monthly loads and yields of nutrients were calculated for the three sampling locations on the

  16. Multiple pathways process stalled replication forks.

    PubMed

    Michel, Bénédicte; Grompone, Gianfranco; Florès, Maria-Jose; Bidnenko, Vladimir

    2004-08-31

    Impairment of replication fork progression is a serious threat to living organisms and a potential source of genome instability. Studies in prokaryotes have provided evidence that inactivated replication forks can restart by the reassembly of the replication machinery. Several strategies for the processing of inactivated replication forks before replisome reassembly have been described. Most of these require the action of recombination proteins, with different proteins being implicated, depending on the cause of fork arrest. The action of recombination proteins at blocked forks is not necessarily accompanied by a strand-exchange reaction and may prevent rather than repair fork breakage. These various restart pathways may reflect different structures at stalled forks. We review here the different strategies of fork processing elicited by different kinds of replication impairments in prokaryotes and the variety of roles played by recombination proteins in these processes.

  17. X-15 mock-up with test pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1993-01-01

    NASA research pilot Milt Thompson is seen here with the mock-up of X-15 #3 that was later installed at the NASA Dryden Flight Research Center, Edwards, California. Milton 0. Thompson was a research pilot, Chief Engineer and Director of Research Projects during a long career at the NASA Dryden Flight Research Center. Thompson was hired as an engineer at the flight research facility on 19 March 1956, when it was still under the auspices of NACA. He became a research pilot on 25 May 1958. Thompson was one of the 12 NASA, Air Force, and Navy pilots to fly the X-15 rocket-powered research aircraft between 1959 and 1968. He began flying X-15s on 29 October 1963. He flew the aircraft 14 times during the following two years, reaching a maximum speed of 3723 mph (Mach 5.42) and a peak altitude of 214,100 feet on separate flights. (On a different flight, he reached a Mach number of 5.48 but his mph was only 3712.) Thompson concluded his active flying career in 1968, becoming Director of Research Projects. In 1975 he was appointed Chief Engineer and retained the position until his death on 8 August 1993. The X-15 was a rocket powered aircraft 50 ft long with a wingspan of 22 ft. It was a missile-shaped vehicle with an unusual wedge-shaped vertical tail, thin stubby wings, and unique side fairings that extended along the side of the fuselage. The X-15 weighed about 14,000 lb empty and approximately 34,000 lb at launch. The XLR-99 rocket engine, manufactured by Thiokol Chemical Corp., was pilot controlled and was capable of developing 57,000 lb of thrust. North American Aviation built three X-15 aircraft for the program. The X-15 research aircraft was developed to provide in-flight information and data on aerodynamics, structures, flight controls, and the physiological aspects of high-speed, high-altitude flight. A follow on program used the aircraft as a testbed to carry various scientific experiments beyond the Earth's atmosphere on a repeated basis. For flight in the dense

  18. X-15 #3 with test pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1964-01-01

    NASA research pilot Milt Thompson stands next to the X-15 #3 ship after a research flight. Milton 0. Thompson was a research pilot, Chief Engineer and Director of Research Projects during a long career at the NASA Dryden Flight Research Center. Thompson was hired as an engineer at the Flight Research Facility on March 19, 1956, when it was still under the auspices of NACA. He became a research pilot on May 25, 1958. Thompson was one of the 12 NASA, Air Force, and Navy pilots to fly the X-15 rocket-powered research aircraft between 1959 and 1968. He began flying X-15s on October 29, 1963. He flew the aircraft 14 times during the following two years, reaching a maximum speed of 3723 mph (Mach 5.42) and a peak altitude of 214,100 feet on separate flights. Thompson concluded his active flying career in 1968, becoming Director of Research Projects. In 1975 he was appointed Chief Engineer and retained the position until his death on August 8, 1993. The X-15 was a rocket-powered aircraft 50 ft long with a wingspan of 22 ft. It was a missile-shaped vehicle with an unusual wedge-shaped vertical tail, thin stubby wings, andunique side fairings that extended along the side of the fuselage. The X-15 weighed about 14,000 lb empty and approximately 34,000 lb at launch. The XLR-99 rocket engine, manufactured by Thiokol Chemical Corp., was pilot controlled and was capable of developing 57,000 lb of thrust. North American Aviation built three X-15 aircraft for the program. The X-15 research aircraft was developed to provide in-flight information and data on aerodynamics, structures, flight controls, and the physiological aspects of high-speed, high-altitude flight. A follow-on program used the aircraft as a testbed to carry various scientific experiments beyond the Earth's atmosphere on a repeated basis. For flight in the dense air of the usable atmosphere, the X-15 used conventional aerodynamic controls such as rudders on the vertical stabilizers to control yaw and movable

  19. X-15 mock-up with test pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1993-01-01

    NASA research pilot Milt Thompson stands next to a mock-up of X-15 number 3 that was later installed at the NASA Dryden Flight Research Center, Edwards, California. Milton 0. Thompson was a research pilot, Chief Engineer and Director of Research Projects during a long career at the NASA Dryden Flight Research Center. Thompson was hired as an engineer at the flight research facility on 19 March 1956, when it was still under the auspices of NACA. He became a research pilot on 25 May 1958. Thompson was one of the 12 NASA, Air Force, and Navy pilots to fly the X-15 rocket-powered research aircraft between 1959 and 1968. He began flying X-15s on 29 October 1963. He flew the aircraft 14 times during the following two years, reaching a maximum speed of 3723 mph (Mach 5.42) and a peak altitude of 214,100 feet on separate flights. Thompson concluded his active flying career in 1968, becoming Director of Research Projects. In 1975 he was appointed Chief Engineer and retained the position until his death on 8 August 1993. The X-15 was a rocket-powered aircraft 50 ft long with a wingspan of 22 ft. It was a missile-shaped vehicle with an unusual wedge-shaped vertical tail, thin stubby wings, and unique side fairings that extended along the side of the fuselage. The X-15 weighed about 14,000 lb empty and approximately 34,000 lb at launch. The XLR-99 rocket engine, manufactured by Thiokol Chemical Corp., was pilot controlled and was capable of developing 57,000 lb of thrust. North American Aviation built three X-15 aircraft for the program. The X-15 research aircraft was developed to provide in-flight information and data on aerodynamics, structures, flight controls, and the physiological aspects of high-speed, high-altitude flight. A follow-on program used the aircraft as a testbed to carry various scientific experiments beyond the Earth's atmosphere on a repeated basis. For flight in the dense air of the usable atmosphere, the X-15 used conventional aerodynamic controls such as

  20. 1. Historic American Building Survey Thompson & West Illustrated History ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. Historic American Building Survey Thompson & West Illustrated History of Sacramento Co. Drawing of 1880 Plan & Rephoto 1960 NORTHEAST CORNER AND GENERAL PLAN - Crocker Art Gallery, 216 O Street, Sacramento, Sacramento County, CA

  1. 1. Historic American Buildings Survey Thompson & West Illustrator in ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. Historic American Buildings Survey Thompson & West Illustrator in History of Sacramento County Photo Copy 1960 NORTH ELEVATION (1880) - Albert Gallatin House, 1527 H Street, Sacramento, Sacramento County, CA

  2. Joule-Thompson effect in a disperse medium

    NASA Astrophysics Data System (ADS)

    Tolmachev, E. M.

    1980-05-01

    An expression for the Joule-Thompson coefficient of a polydisperse medium subject to throttling is derived in the relaxation approximation of thermodynamics of irreversible processes, with both temperature and velocity relaxation in the phases taken into account.

  3. Parents'/Carers' Perceptions and Experiences of Growing, Preparing and Eating Their Own Fruit and Vegetables as Part of the "Field to Fork" Project

    ERIC Educational Resources Information Center

    Burton, Diana M.; May, Stephanie

    2016-01-01

    This paper reports research into a project to encourage KS1 and KS2 pupils to eat more healthily by supporting their families to grow their own fruit and vegetables at home. Participants were recruited through a Primary School Trust comprising four primary schools in the North West of England. They were given practical support to enable them to…

  4. Replication fork instability and the consequences of fork collisions from rereplication

    PubMed Central

    Alexander, Jessica L.; Orr-Weaver, Terry L.

    2016-01-01

    Replication forks encounter obstacles that must be repaired or bypassed to complete chromosome duplication before cell division. Proteomic analysis of replication forks suggests that the checkpoint and repair machinery travels with unperturbed forks, implying that they are poised to respond to stalling and collapse. However, impaired fork progression still generates aberrations, including repeat copy number instability and chromosome rearrangements. Deregulated origin firing also causes fork instability if a newer fork collides with an older one, generating double-strand breaks (DSBs) and partially rereplicated DNA. Current evidence suggests that multiple mechanisms are used to repair rereplication damage, yet these can have deleterious consequences for genome integrity. PMID:27898391

  5. 5. View of Clark Fork Vehicle Bridge facing east. Bridge ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. View of Clark Fork Vehicle Bridge facing east. Bridge from south shore of Clark Fork River-southernmost span. 1900-era Northern Pacific Railway Bridge in background. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  6. Fitness of Salmonella enterica serovar Thompson in the cilantro phyllosphere.

    PubMed

    Brandl, Maria T; Mandrell, Robert E

    2002-07-01

    The epiphytic fitness of Salmonella enterica was assessed on cilantro plants by using a strain of S. enterica serovar Thompson that was linked to an outbreak resulting from cilantro. Salmonella serovar Thompson had the ability to colonize the surface of cilantro leaves, where it was detected by confocal laser scanning microscopy (CLSM) at high densities on the veins and in natural lesions. The population sizes of two common colonizers of plant surfaces, Pantoea agglomerans and Pseudomonas chlororaphis, were 10-fold higher than that of the human pathogen on cilantro incubated at 22 degrees C. However, Salmonella serovar Thompson achieved significantly higher population levels and accounted for a higher proportion of the total culturable bacterial flora on cilantro leaves when the plants were incubated at warm temperatures, such as 30 degrees C, after inoculation, indicating that the higher growth rates exhibited by Salmonella serovar Thompson at warm temperatures may increase the competitiveness of this organism in the phyllosphere. The tolerance of Salmonella serovar Thompson to dry conditions on plants at 60% relative humidity was at least equal to that of P. agglomerans and P. chlororaphis. Moreover, after exposure to low humidity on cilantro, Salmonella serovar Thompson recovered under high humidity to achieve its maximum population size in the cilantro phyllosphere. Visualization by CLSM of green fluorescent protein-tagged Salmonella serovar Thompson and dsRed-tagged P. agglomerans inoculated onto cilantro revealed that the human pathogen and the bacterial epiphyte formed large heterogeneous aggregates on the leaf surface. Our studies support the hypothesis that preharvest contamination of crops by S. enterica plays a role in outbreaks linked to fresh fruits and vegetables.

  7. Pathways of mammalian replication fork restart.

    PubMed

    Petermann, Eva; Helleday, Thomas

    2010-10-01

    Single-molecule analyses of DNA replication have greatly advanced our understanding of mammalian replication restart. Several proteins that are not part of the core replication machinery promote the efficient restart of replication forks that have been stalled by replication inhibitors, suggesting that bona fide fork restart pathways exist in mammalian cells. Different models of replication fork restart can be envisaged, based on the involvement of DNA helicases, nucleases, homologous recombination factors and the importance of DNA double-strand break formation.

  8. South Fork Clearwater River Habitat Enhancement, Nez Perce National Forest.

    SciTech Connect

    Siddall, Phoebe

    1992-04-01

    In 1984, the Nez Perce National forest and the Bonneville Power Administration entered into a contractual agreement which provided for improvement of spring chinook salmon and summer steelhead trout habitat in south Fork Clearwater River tributaries. Project work was completed in seven main locations: Crooked River, Red River, Meadow Creek Haysfork Gloryhole, Cal-Idaho Gloryhole, Fisher Placer and Leggett Placer. This report describes restoration activities at each of these sites.

  9. 75 FR 25197 - Shasta Trinity National Forest, South Fork Management Unit, California Salt Timber Harvest and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-07

    ... Forest Service Shasta Trinity National Forest, South Fork Management Unit, California Salt Timber Harvest... statement for the Salt Timber Harvest and Fuels Reduction Project (Salt Project). A supplemental environmental impact statement will be prepared for the Salt Project to supplement wildlife management...

  10. 16 CFR 1512.13 - Requirements for front fork.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... REGULATIONS REQUIREMENTS FOR BICYCLES Regulations § 1512.13 Requirements for front fork. The front fork shall... fork test, § 1512.18(k)(1), without visible evidence of fracture. Sidewalk bicycles need not meet...

  11. Pre-operative templating for trauma hemiarthroplasty (Thompson's)

    PubMed Central

    Green, Robert Nicholas; Rushton, Paul R.P.; Kramer, Derek; Inman, Dominic; Partington, Paul F.

    2015-01-01

    Introduction Surgical complications may be avoided by preoperative templating in trauma hemiarthroplasty. Materials and methods Digital templates for the Stryker™ range of Thompson's prostheses were created and fifty trauma patients that had undergone cemented hemiarthroplasty were retrospectively templated by 2 blinded surgeons. Results Templating for prosthesis size was highly accurate with excellent Inter and intra-observer reproducibility. Sensitivity for identifying femoral canals too narrow for a Thompsons was 100%. Conclusions Templating is a valuable tool and should be standard practice in trauma. We have demonstrated that it is possible to generate custom templates to allow accurate templating. PMID:26566327

  12. Research reactor fork users manual

    SciTech Connect

    Hsue, S.T.; Menlove, H.O.; Bosler, G.E.; Dye, H.R.; Walton, G.; Halbig, J.K.; Siebelist, R.

    1993-11-01

    This manual describes the design features and operating characteristics of the research reactor fork. The system includes an ion chamber for gross gamma-ray counting, fission chambers for neutron counting, and a collimated high-resolution spectroscopy system for gamma-ray measurements. The neutron and ion chamber measurements are designed to be made underwater in spent-fuel cooling ponds. The neutron and gamma-ray detectors have been designed with high efficiencies to accommodate the relatively low emission rates of neutrons and gamma rays from low-burnup, research-type reactor fuel. This manual presents the design, performance, and test results for the system.

  13. Fifth-wheel fork truck adapter

    NASA Technical Reports Server (NTRS)

    Smith, P. L.

    1969-01-01

    Standard fifth wheel mounted on a rectangular steel structure adapted for use with a fork lift truck provides a fast, safe, and economical way of maneuvering semitrailers in close quarters at plants and warehouses. One operator can move and locate a semitrailer without dismounting from a fork lift truck.

  14. Training Guidelines: Fork Lift Truck Driving.

    ERIC Educational Resources Information Center

    Ceramics, Glass, and Mineral Products Industry Training Board, Harrow (England).

    This manual of operative training guidelines for fork lift truck driving has been developed by the Ceramics, Glass and Mineral Products Industry Training Board (Great Britain) in consultation with a number of firms which manufacture fork lift trucks or which already have training--programs for their use. The purpose of the guidelines is to assist…

  15. 21 CFR 882.1525 - Tuning fork.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Tuning fork. 882.1525 Section 882.1525 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES NEUROLOGICAL DEVICES Neurological Diagnostic Devices § 882.1525 Tuning fork. (a) Identification. A tuning...

  16. 21 CFR 882.1525 - Tuning fork.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Tuning fork. 882.1525 Section 882.1525 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES NEUROLOGICAL DEVICES Neurological Diagnostic Devices § 882.1525 Tuning fork. (a) Identification. A tuning...

  17. 21 CFR 882.1525 - Tuning fork.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Tuning fork. 882.1525 Section 882.1525 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES NEUROLOGICAL DEVICES Neurological Diagnostic Devices § 882.1525 Tuning fork. (a) Identification. A tuning...

  18. 21 CFR 882.1525 - Tuning fork.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Tuning fork. 882.1525 Section 882.1525 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES NEUROLOGICAL DEVICES Neurological Diagnostic Devices § 882.1525 Tuning fork. (a) Identification. A tuning...

  19. 21 CFR 882.1525 - Tuning fork.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Tuning fork. 882.1525 Section 882.1525 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES NEUROLOGICAL DEVICES Neurological Diagnostic Devices § 882.1525 Tuning fork. (a) Identification. A tuning...

  20. Crafts, Boys, Ernest Thompson Seton, and the Woodcraft Movement

    ERIC Educational Resources Information Center

    Chalmers, F. Graeme; Dancer, Andrea A.

    2008-01-01

    This article examines early influences on art education for boys (Chalmers & Dancer, 2007) in areas traditionally labeled as crafts. Under review is the work of Ernest Thompson Seton, artist, naturalist, storyteller, author, philosopher, crusader for and supporter of indigenous American Indian ways of knowing, and a co-founder of the Boy Scouts of…

  1. 2. Historic American Building Survey History of Sacramento County Thompson ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. Historic American Building Survey History of Sacramento County Thompson & West Illustration Original 1880 Rephoto 1960 N.W. Corner of 3rd + P ST., SOUTH HOUSE (Property of Mrs. E.B. Crocker, 3rd & P St.) - Crocker Art Gallery, 216 O Street, Sacramento, Sacramento County, CA

  2. On Happiness and High Achievement: An Interview with Michael Thompson

    ERIC Educational Resources Information Center

    National Association of Independent Schools (NAIS) (NJ), 2006

    2006-01-01

    Michael G. Thompson knows independent schools. He attended them in elementary and secondary school, and has worked in them as a psychologist. He consults with more than 30 schools a year, addressing a myriad of issues related to complex human interaction. He has written often in "Independent School" about everything from understanding the social…

  3. A COMPREHENSIVE NONPOINT SOURCE FIELD STUDY FOR SEDIMENT, NUTRIENTS, AND PATHOGENS IN THE SOUTH FORK BROAD RIVER WATERSHED IN NORTHEAST GEORGIA

    EPA Science Inventory

    This technical report provides a description of the field project design, quality control, the sampling protocols and analysis methodology used, and standard operating procedures for the South Fork Broad River Watershed (SFBR) Total Maximum Daily Load (TMDL) project. This watersh...

  4. 75 FR 33741 - Safety Zone; Tracey/Thompson Wedding, Lake Erie, Catawba Island, OH

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-15

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Tracey/Thompson Wedding, Lake Erie, Catawba... zone is intended to restrict vessels from portions of Lake Erie during the Tracey/Thompson Wedding... and vessels during the setup, loading, and launching of the Tracey/Thompson Wedding Fireworks...

  5. Bruce Thompson: Adventures and advances in ultrasonic backscatter

    NASA Astrophysics Data System (ADS)

    Margetan, Frank J.

    2012-05-01

    Over the course of his professional career Dr. R. Bruce Thompson published several hundred articles on non-destructive evaluation, the majority dealing with topics in ultrasonics. One longtime research interest of Dr. Thompson, with applications both to microstructure characterization and defect detection, was backscattered grain noise in metals. Over a 20 year period he led a revolving team of staff members and graduate students investigating various aspects of ultrasonic backscatter. As a member of that team I had the privilege of working along side Dr. Thompson for many years, serving as a sort of Dr. Watson to Bruce's Sherlock Holmes. This article discusses Dr. Thompson's general approaches to modeling backscatter, the research topics he chose to explore to systematically elucidate a better understanding of the phenomena, and the many contributions to the field achieved under his leadership. The backscatter work began in earnest around 1990, motivated by a need to improve inspections of aircraft engine components. At that time Dr. Thompson launched two research efforts. The first led to the heuristic Independent Scatterer Model which could be used to estimate the average grain noise level that would be seen in any given ultrasonic inspection. There the contribution from the microstructure was contained in a measureable parameter known as the Figure-of-Merit or FOM. The second research effort, spearheaded by Dr. Jim Rose, led to a formal relationship between FOM and details of the metal microstructure. The combination of the Independent Scattering Model and Rose's formalism provided a powerful tool for investigating backscatter in metals. In this article model developments are briefly reviewed and several illustrative applications are discussed. These include: the determination of grain size and shape from ultrasonic backscatter; grain noise variability in engine-titanium billets and forgings; and the design of ultrasonic inspection systems to improve defect

  6. M2-F1 on lakebed with pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1963-01-01

    adequate for the roughly 400 car tows that got the M2-F1 airborne to prove it could fly safely and to train pilots before they were towed behind a C-47 aircraft and released. These initial car-tow tests produced enough flight data about the M2-F1 to proceed with flights behind the C-47 tow plane at greater altitudes. The C-47 took the craft to an altitude of 12,000 where free flights back to Rogers Dry Lake began. Pilot for the first series of flights of the M2-F1 was NASA research pilot Milt Thompson. Typical glide flights with the M2-F1 lasted about two minutes and reached speeds of 110 to l20 mph. A small solid landing rocket, referred to as the 'instant L/D rocket,' was installed in the rear base of the M2-F1. This rocket, which could be ignited by the pilot, provided about 250 pounds of thrust for about 10 seconds. The rocket could be used to extend the flight time near landing if needed. More than 400 ground tows and 77 aircraft tow flights were carried out with the M2-F1. The success of Dryden's M2-F1 program led to NASA's development and construction of two heavyweight lifting bodies based on studies at NASA's Ames and Langley research centers--the M2-F2 and the HL-10, both built by the Northrop Corporation, and the U.S. Air Force's X-24 program, with an X-24A and -B built by Martin. The Lifting Body program also heavily influenced the Space Shuttle program. The M2-F1 program demonstrated the feasibility of the lifting body concept for horizontal landings of atmospheric entry vehicles. It also demonstrated a procurement and management concept for prototype flight test vehicles that produced rapid results at very low cost (approximately $50,000, excluding salaries of government employees assigned to the project).

  7. 23. View of Clark Fork Vehicle Bridge facing upwest side. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    23. View of Clark Fork Vehicle Bridge facing up-west side. Looking at structural connection of top chord, vertical laced channel and diagonal bars. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  8. 13. View of Clark Fork Vehicle Bridge facing south. Concrete ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    13. View of Clark Fork Vehicle Bridge facing south. Concrete barrier blocks access. Plaque was originally located where strioed traffic sign is posted at right. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  9. 14. View of Clark Fork Vehicle Bridge facing north. Approach ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    14. View of Clark Fork Vehicle Bridge facing north. Approach from the south. Concrete barrier blocks access. Plaque was originally located where striped traffic sign is posted at right. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  10. 24. View of one of the plaques from Clark Fork ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    24. View of one of the plaques from Clark Fork Vehicle Bridge. Presently located at the Bonner County Historical Museum in Sandpoint, Idaho. A plaque was attached at each end of the bridge. Only one remains. - Clark Fork Vehicle Bridge, Spanning Clark Fork River, serves Highway 200, Clark Fork, Bonner County, ID

  11. South Fork Holston River basin 1988 biomonitoring

    SciTech Connect

    Saylor, C.F.; Ahlstedt, S.A.

    1990-06-01

    There is concern over the effects of shifts in land use use practices on the aquatic fauna of streams in the South Fork Holston River basin in northwestern North Carolina and southwestern Virginia. Trout reproduction has noticeably declined in the Watauga River subbasin. The Watauga River and Elk River subbasins have been subjected to commercial and resort development. The Middle fork Holston River and the upper South Fork Holston River subbasins have been affected by agricultural and mining activities, respectively (Cox, 1986). To aid reclamation and management of the South Fork Holston basin, Tennessee Valley Authority (TVA) biologists conducted biomonitoring--including index of biotic integrity and macroinvertebrate sampling--on the Middle Fork Holston, South Fork Holston, Watauga, and Elk Rivers to assess cumulative impairment related to changes in habitat and pollutant loading in these subbasins. Biomonitoring can detect environmental degradation, help document problem areas, and assist in development of strategies for managing water quality. This report discusses the methods and materials and results of the biomonitoring of South Fork Holston River Basin. 13 refs., 5 figs., 12 tabs.

  12. Acoustic Doppler current profiling from the JGOFS Arabian Sea cruises aboard the RV T.G. Thompson

    SciTech Connect

    Kim, H.S.; Flagg, C.N.; Shi, Y.

    1996-12-01

    Acoustic Doppler current profiler (ADCP) data is part of the core data for the US JGOFS Arabian Sea project, along with hydrographic and nutrient data. Seventeen cruises are scheduled to take place between September 1994 and January 1996 on the R/V T.G. Thompson. Seven of the cruises follow a standard cruise track, taking hydrographic, chemical and biological measurements. The rest of the cruises, which take place generally within the standard cruise region defined by a set track, are for the deployment and recovery of moored equipment and towing of a SeaSoar. Detailed description of ADCP hardware, the AutoADCP data acquisition system, and the collection of navigation and compass data on the Thompson is documented in Section 2. Followed by data collection for each cruise together with a cruise track, Section 3 presents the processing and analysis of velocity and acoustic backscatter intensity data. Section 5 shows results of profile quality diagnosis.

  13. South Fork Clearwater River Habitat Enhancement, Crooked and Red Rivers : Annual Report, 1989.

    SciTech Connect

    Baer, William H.

    1990-01-01

    In 1983, the Nez Perce National Forest and the Bonneville Power Administration entered into an interagency agreement to enhance and improve habitat for two anadromous fish species, spring chinook salmon (Oncorhynchus tshawyscha) and summer steelhead trout (Onchorhyncus mykiss), in the South Fork Clearwater River tributaries. The South Fork Clearwater River was dammed in 1927 for hydroelectric development. Anadromous fish runs were virtually eliminated until the dam was removed in 1962. To complicate the problem, upstream spawning and rearing habitats were severely impacted by dredge and hydraulic mining, road building, timber harvest, and over-grazing. Fish habitat improvement projects under the above contract are being carried out in two major tributaries to the South Fork Clearwater River. Both the Red River and the Crooked River projects began in 1983 and will be completed in 1990. 12 figures., 1 tab.

  14. Soil Data from a Moderately Well and Somewhat Poorly Drained Fire Chronosequence near Thompson, Manitoba, Canada

    USGS Publications Warehouse

    Manies, K.L.; Harden, J.W.; Veldhuis, Hugo; Trumbore, Sue

    2006-01-01

    The U.S. Geological Survey project Fate of Carbon in Alaskan Landscapes (FOCAL) is studying the effect of fire and soil drainage on soil carbon storage in the boreal forest. As such this group was invited to be a part of a NSF-funded project (Fire, Ecosystem and Succession - Experiment Boreal or FIRES-ExB) to study the carbon balance of sites that varied in age (time since fire) and soil drainage in the Thompson, Manitoba, Canada region. This report describes the location of our FIRES-ExB sampling sites as well as the procedures used to describe, sample, and analyze the soils. This report also contains data tables with sample related information including, but not limited to, field descriptions, bulk density, particle size distribution, moisture content, carbon (C) concentration, nitrogen (N) concentration, isotopic data for C, and major, minor and trace elemental concentration.

  15. Modeling Laser Damage Thresholds Using the Thompson-Gerstman Model

    DTIC Science & Technology

    2014-10-01

    Thompson-Gerstman model considers only photothermal effects. While many granule models assume melanosomes of zero diameter to reduce the complexity of the...high intensity surrounded by a region of zero intensity without the smooth transition seen in the gaussian profile. An annular beam resembles a ring...or donut-shaped beam similar to the top-hat profile with a small region of zero intensity in the center of the beam profile. Examples of thermal

  16. Sarcophilia, cremation and Sir Henry Thompson (1820-1904).

    PubMed

    Jellinek, E H

    2009-11-01

    Sarcophilia, a neologism for an attachment to human remains, is set in a review of the history of the disposal of the dead. The ancient practice of cremation was relaunched late in the 19th century by the urological surgeon cum social reformer Sir Henry Thompson. He was stimulated by Edwin Chadwick and Charles Dickens, and by Charles Darwin's observations on the earthworm. Sarcophilia is the reason for the controversial Human Tissue Act of 2004.

  17. 33 CFR 110.48 - Thompson Cove on east side of Pawcatuck River below Westerly, R.I.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Thompson Cove on east side of..., DEPARTMENT OF HOMELAND SECURITY ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.48 Thompson... channelward end of Thompson Dock at the northern end of Thompson Cove 184° to the shore at the southern end...

  18. 1976 Big Thompson Flood, Colorado - Thirty Years Later

    USGS Publications Warehouse

    Jarrett, Robert D.; Costa, John E.

    2006-01-01

    In the early evening of Saturday, July 31, 1976, a large stationary thunderstorm released as much as 7.5 inches of rainfall in about an hour (about 12 inches in a few hours) in the middle reaches of the Big Thompson River Basin and to a lesser extent in parts of the Cache la Poudre River Basin. In steep mountain terrain with thin or no soil, this large amount of rainfall in such a short period of time produced a flash flood that caught residents and tourists by surprise. The sudden flood that churned down the narrow Big Thompson Canyon scoured the river channel that night, caused over $35 million in damages (1977 dollars) to 418 homes and businesses, many mobile homes, 438 automobiles, numerous bridges, paved and unpaved roads, power and telephone lines, and many other structures. The tragedy claimed the lives of 144 people, including two law enforcement officers trying to evacuate people in danger, and there were 250 reported injuries. Scores of other people narrowly escaped with their lives. More than 800 people were evacuated by helicopter the following morning. This fact sheet presents a summary of the hydrologic conditions of the 1976 flood, describes some of the advances in U.S. Geological Survey (USGS) flood science as a consequence of this disaster, and provides a reminder that extreme floods like the 1976 Big Thompson flood have occurred in other locations in Colorado in the past and will occur again.

  19. DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.

    PubMed

    Mayle, Ryan; Campbell, Ian M; Beck, Christine R; Yu, Yang; Wilson, Marenda; Shaw, Chad A; Bjergbaek, Lotte; Lupski, James R; Ira, Grzegorz

    2015-08-14

    Most spontaneous DNA double-strand breaks (DSBs) result from replication-fork breakage. Break-induced replication (BIR), a genome rearrangement-prone repair mechanism that requires the Pol32/POLD3 subunit of eukaryotic DNA Polδ, was proposed to repair broken forks, but how genome destabilization is avoided was unknown. We show that broken fork repair initially uses error-prone Pol32-dependent synthesis, but that mutagenic synthesis is limited to within a few kilobases from the break by Mus81 endonuclease and a converging fork. Mus81 suppresses template switches between both homologous sequences and diverged human Alu repetitive elements, highlighting its importance for stability of highly repetitive genomes. We propose that lack of a timely converging fork or Mus81 may propel genome instability observed in cancer.

  20. Mus81 and converging forks limit the mutagenicity of replication fork breakage

    PubMed Central

    Mayle, Ryan; Campbell, Ian M.; Beck, Christine R.; Yu, Yang; Wilson, Marenda; Shaw, Chad A.; Bjergbaek, Lotte; Lupski, James R.; Ira, Grzegorz

    2016-01-01

    Most spontaneous DNA double-strand breaks (DSBs) result from replication-fork breakage. Break-induced replication (BIR), a genome rearrangement-prone repair mechanism that requires the Pol32/POLD3 subunit of eukaryotic DNA Polδ, was proposed to repair broken forks, but how genome destabilization is avoided was unknown. We show that broken fork repair initially uses error-prone Pol32-dependent synthesis, but that mutagenic synthesis is limited to within a few kilobases from the break by Mus81 endonuclease and a converging fork. Mus81 suppresses template switches between both homologous sequences and diverged human Alu repetitive elements, highlighting its importance for stability of highly repetitive genomes. We propose that lack of a timely converging fork or Mus81 may propel genome instability observed in cancer. PMID:26273056

  1. Acoustic doppler current profiling from the JGOFS Arabian Sea cruises aboard the RV T.G. Thompson

    SciTech Connect

    Flagg, C.N.; Shi, Y.

    1995-04-01

    Acoustic Doppler Current Profiler (ADCP) data from the R/V T.G. THOMPSON is part of the core data for the US JGOFS Arabian Sea project along with hydrographic and nutrient data. Seventeen cruises on the THOMPSON are scheduled to take place between September 1994 and January 1996. The first of these cruises, a transit of the R/V THOMPSON into the northern Arabian Sea area from Singapore, was a calibration and training cruise that took place between September 18 and October 7, 1994. (The cruises on the THOMPSON are numbered consecutively from the ship`s commissioning with the first JOGFS cruise designated TN039.) The remaining cruises have been and will be staged from Muscat, Oman. Seven of these cruises, referred to as process cruises, will follow a set cruise track, making hydrographic, chemical and biological measurements. The remainder of the cruises while not restricted to the set cruise track, will generally stay within the region defined by the track during the deployment and retrieval of moored equipment and the towing of a SeaSoar. Each cruise will last between two weeks and one month. ADCP data will be collected on all the JGOFS Arabian Sea cruises using an autonomous data acquisition system developed for ship-of-opportunity cruises. This system, referred to as the AutoADCP, makes it possible to collect the ADCP data without the constant monitoring usually necessary and assures constant data coverage and uniform data quality. The AutoADCP system is an extension of RD Instrument`s DAS version 2.48 using enhancements made possible with ``user exit`` programs. This data report presents ADCP results from the first four JGOFS cruises, TN039 through TN042, concentrating on the data collection and processing methods.

  2. Storm water control plan for the Lower East Fork Poplar Creek Operable Unit, Oak Ridge, Tennessee

    SciTech Connect

    1996-04-01

    This document provides the Environmental Restoration Program with information about the erosion and sediment control, storm water management, maintenance, and reporting and record keeping practices to be employed during Phase II of the remediation project for the Lower East Fork Poplar Creek (LEFPC) Operable Unit.

  3. 5. Roaring Fork Motor Nature Trail, vista at stop three. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. Roaring Fork Motor Nature Trail, vista at stop three. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  4. 2. Roaring Fork Motor Nature Trail, road view before first ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. Roaring Fork Motor Nature Trail, road view before first stop. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  5. 1. Roaring Fork Motor Nature Trail, entrance sign. Great ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. Roaring Fork Motor Nature Trail, entrance sign. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  6. 7. Roaring Fork Motor Nature Trail, rocks along edge of ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    7. Roaring Fork Motor Nature Trail, rocks along edge of road. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  7. 3. Roaring Fork Motor Nature Trail, view between second and ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    3. Roaring Fork Motor Nature Trail, view between second and third stops - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  8. 11. Roaring Fork Motor Nature Trail, boulders along road after ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    11. Roaring Fork Motor Nature Trail, boulders along road after stop 13. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  9. Roaring Fork Motor Nature Trail, Title Sheet Great Smoky ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Roaring Fork Motor Nature Trail, Title Sheet - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  10. 9. Roaring Fork Motor Nature Trail, Reagan House. Great ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    9. Roaring Fork Motor Nature Trail, Reagan House. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  11. 6. Roaring Fork Motor Nature Trail, road view after stop ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    6. Roaring Fork Motor Nature Trail, road view after stop four. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  12. 12. Roaring Fork Motor Nature Trail, place of a thousand ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. Roaring Fork Motor Nature Trail, place of a thousand drips, view from road. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  13. 12. PLANK BRIDGE ON OLD ROAD NEAR NORTH FORK VIRGIN ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. PLANK BRIDGE ON OLD ROAD NEAR NORTH FORK VIRGIN RIVER BRIDGE, FACING EAST - Zion-Mount Carmel Highway, Virgin River Bridge, Spanning North Fork of Virgin River on Zion-Mount Carmel Highway, Springdale, Washington County, UT

  14. South Fork Latrine showing north and west sides, general view ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Latrine showing north and west sides, general view to southeast - Fort McKinley, South Fork Latrine, West side of East Side Drive, approximately 225 feet south of Weymouth Way, Great Diamond Island, Portland, Cumberland County, ME

  15. South Fork Latrine, east elevation showing structure in context, view ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Latrine, east elevation showing structure in context, view west - Fort McKinley, South Fork Latrine, West side of East Side Drive, approximately 225 feet south of Weymouth Way, Great Diamond Island, Portland, Cumberland County, ME

  16. South Fork Latrine, oblique view showing south and east sides; ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Latrine, oblique view showing south and east sides; view northwest - Fort McKinley, South Fork Latrine, West side of East Side Drive, approximately 225 feet south of Weymouth Way, Great Diamond Island, Portland, Cumberland County, ME

  17. 8. Roaring Fork Motor Nature Trail, handbuilt rock pile. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    8. Roaring Fork Motor Nature Trail, hand-built rock pile. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  18. Resonant tuning fork detector for electromagnetic radiation.

    PubMed

    Pohlkötter, Andreas; Willer, Ulrike; Bauer, Christoph; Schade, Wolfgang

    2009-02-01

    A mechanical quartz microresonator (tuning fork) is used to detect electromagnetic radiation. The detection scheme is based on forces created due to the incident electromagnetic radiation on the piezoelectric tuning fork. A force can be created due to the transfer of the photon momentum of the incident electromagnetic radiation. If the surfaces of the tuning fork are nonuniformly heated, a second force acts on it, the so-called photophoretic force. These processes occur for all wavelengths of the incident radiation, making the detector suitable for sensing of ultraviolet, visible, and mid-infrared light, even THz-radiation. Here the detector is characterized in the visible range; noise analysis is performed for 650 nm and 5.26 microm. A linear power characteristic and the dependence on pulse lengths of the incoming light are shown. Examples for applications for the visible and mid-infrared spectral region are given by 2f and absorption spectroscopy of oxygen and nitric oxide, respectively.

  19. Wildlife Impact Assessment and Summary of Previous Mitigation Related to Hydroelectric Projects in Montana, Phase 1, Volume Two (B), Clark Fork River Projects, Cabinet Gorge and Noxon Rapids Dams, Operator, Washington Water Power Company.

    SciTech Connect

    Wood, Marilyn

    1984-06-01

    This report documents best available information concerning the wildlife species impacted and the degree of the impact. A target species list was developed to focus the impact assessment and to direct mitigation efforts. Many non-target species also incurred impacts but are not discussed in this report. All wildlife habitats inundated by the two reservoirs are represented by the target species. It was assumed the numerous non-target species also affected will be benefited by the mitigation measures adopted for the target species. Impacts addressed are limited to those directly attributable to the loss of habitat and displacement of wildlife populations due to the construction and operation of the two hydroelectric projects. Secondary impacts, such as the relocation of railroads and highways, and the increase of the human population, were not considered. In some cases, both positive and negative impacts were assessed; and the overall net effect was reported. The loss/gain estimates reported represent impacts considered to have occurred during one point in time except where otherwise noted. When possible, quantitative estimates were developed based on historical information from the area or on data from similar areas. Qualitative loss estimates of low, moderate, or high with supporting rationale were assessed for each species or species group.

  20. Yawning, fatigue, and cortisol: expanding the Thompson Cortisol Hypothesis.

    PubMed

    Thompson, Simon B N

    2014-10-01

    Yawning and its involvement in neurological disorders has become the new scientific conundrum. Cortisol levels are known to rise during stress and fatigue; yawning may occur when we are under stress or tired. However, the link between yawning, fatigue, and cortisol has not been fully understood. Expansion of the Thompson Cortisol Hypothesis proposes that the stress hormone, cortisol, is responsible for yawning and fatigue especially in people with incomplete innervation such as multiple sclerosis. This informs our understanding of the functional importance of the brain stem region of the brain in regulating stress and fatigue.

  1. 27 CFR 9.113 - North Fork of Long Island.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2011-04-01 2011-04-01 false North Fork of Long Island... North Fork of Long Island. (a) Name. The name of the viticultural area described in this section is “North Fork of Long Island.” (b) Approved maps. The appropriate maps for determining the boundaries...

  2. 27 CFR 9.113 - North Fork of Long Island.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false North Fork of Long Island... North Fork of Long Island. (a) Name. The name of the viticultural area described in this section is “North Fork of Long Island.” (b) Approved maps. The appropriate maps for determining the boundaries...

  3. 27 CFR 9.113 - North Fork of Long Island.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2013-04-01 2013-04-01 false North Fork of Long Island... North Fork of Long Island. (a) Name. The name of the viticultural area described in this section is “North Fork of Long Island.” (b) Approved maps. The appropriate maps for determining the boundaries...

  4. 27 CFR 9.113 - North Fork of Long Island.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2014-04-01 2014-04-01 false North Fork of Long Island... North Fork of Long Island. (a) Name. The name of the viticultural area described in this section is “North Fork of Long Island.” (b) Approved maps. The appropriate maps for determining the boundaries...

  5. 27 CFR 9.113 - North Fork of Long Island.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2012-04-01 2012-04-01 false North Fork of Long Island... North Fork of Long Island. (a) Name. The name of the viticultural area described in this section is “North Fork of Long Island.” (b) Approved maps. The appropriate maps for determining the boundaries...

  6. Ultrasonic measurement models - A tribute to R. Bruce Thompson

    NASA Astrophysics Data System (ADS)

    Gray, Timothy A.

    2012-05-01

    Over the years, R. Bruce Thompson made many significant contributions to the scientific foundation and engineering application of nondestructive evaluation, most notably in the area of ultrasonics. Of those contributions, perhaps none is more notable than what has come to be known as the Thompson-Gray Measurement Model. Born from humble beginnings as a signal processing adjunct, the model has grown to maturity as a central element in many aspects of ultrasonic NDE, including probe design, UT system specification and optimization, model-assisted POD, and inspection simulation. This paper will be a stroll through the history of this model and its applications. It is a personal recollection of a body of work done with Bruce or as a direct result of Bruce's contributions. It is not intended to be a technical exposition, but a demonstration of the impact of this small segment of his expansive body work with which I had personal experience. It is my tribute to Bruce-boss, colleague, mentor, and friend.

  7. Storm and flood of July 31-August 1, 1976, in the Big Thompson River and Cache la Poudre River basins, Larimer and Weld Counties, Colorado

    USGS Publications Warehouse

    McCain, Jerald F.; Shroba, R.R.

    1979-01-01

    PART A: Devastating flash floods swept through the canyon section of Larimer County in north-central Colorado during the night of July 31-August I, 1976, causing 139 deaths, 5 missing persons, and more than $35 million in total damages. The brunt of the storms occurred over the Big Thompson River basin between Drake and Estes Park with rainfall amounts as much as 12 inches being reported during the storm period. In the Cache la Poudre River basin to the north, a rainfall amount of 10 inches was reported for one locality while 6 inches fell over a widespread area near the central part of the basin. The storms developed when strong low-level easterly winds to the rear of a polar front pushed a moist, conditionally unstable airmass upslope into the Front Range of the Rocky Mountains. Orographic uplift released the convective instability, and light south-southeasterly winds at middle and upper levels allowed the storm complex to remain nearly stationary over the foothills for several hours. Minimal entrainment of relatively moist air at middle and upper levels, very low cloud bases, and a slightly tilted updraft structure contributed to a high precipitation efficiency. Intense rainfall began soon after 1900 MDT (Mountain Daylight Time) in the Big Thompson River and the North Fork Cache la Poudre River basins. A cumulative rainfall curve developed for Glen Comfort from radar data indicates that 7.5 inches of rain fell during the period 1930-2040 MDT on July 31. In the central part of the storm area west of Fort Collins, the heaviest rainfall began about 2200 MDT on July 31 and continued until 0100 MDT on August 1. Peak discharges were extremely large on many streams in the storm area-exceeding previously recorded maximum discharges at several locations. The peak discharge of the Big Thompson River at the gaging station at the canyon mouth, near Drake was 31,200 cubic feet per second or more than four times the previous maximum discharge of 7,600 cubic feet per second at

  8. Homologous recombination as a replication fork escort: fork-protection and recovery.

    PubMed

    Costes, Audrey; Lambert, Sarah A E

    2012-12-27

    Homologous recombination is a universal mechanism that allows DNA repair and ensures the efficiency of DNA replication. The substrate initiating the process of homologous recombination is a single-stranded DNA that promotes a strand exchange reaction resulting in a genetic exchange that promotes genetic diversity and DNA repair. The molecular mechanisms by which homologous recombination repairs a double-strand break have been extensively studied and are now well characterized. However, the mechanisms by which homologous recombination contribute to DNA replication in eukaryotes remains poorly understood. Studies in bacteria have identified multiple roles for the machinery of homologous recombination at replication forks. Here, we review our understanding of the molecular pathways involving the homologous recombination machinery to support the robustness of DNA replication. In addition to its role in fork-recovery and in rebuilding a functional replication fork apparatus, homologous recombination may also act as a fork-protection mechanism. We discuss that some of the fork-escort functions of homologous recombination might be achieved by loading of the recombination machinery at inactivated forks without a need for a strand exchange step; as well as the consequence of such a model for the stability of eukaryotic genomes.

  9. A Study of the Fort Gay-Thompson School Attendance Area, Fort Gay, West Virginia.

    ERIC Educational Resources Information Center

    Comfort, Richard O.; And Others

    The School Community Council of the Fort Gay-Thompson area (West Virginia), organized in May 1971, requested a study in order to look at its past, assess present needs, and plan for the future. The study of the Fort Gay-Thompson School Attendance Area was designed to: (1) describe the area; (2) analyze the characteristics of the people living…

  10. Revisiting Charles H. Thompson's Proposals for Educating Gifted African American Students, 1933-1961

    ERIC Educational Resources Information Center

    Ray, Louis

    2012-01-01

    Charles H. Thompson is best known as the founder and the first editor-in-chief of "The Journal of Negro Education" (1932-1963). Throughout his career, Thompson sought to extend educational opportunity in ways that were "for the good of Negro education as a whole." His main concern was in educating future leaders for service in African American…

  11. Biochemical characteristics and thermal inhibition kinetics of polyphenol oxidase extracted from Thompson seedless grape

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Polyphenol oxidase (PPO) was isolated from Thompson seedless grape (Vitis vinifera 'Thompson Seedless') and its biochemical characteristics were studied. Optimum pH and temperature for grape PPO activity were pH 6.0 and 25 degrees C with 10 mM catechol as substrate. The enzyme was heat-stable betwee...

  12. Water quality and trend analysis of Colorado--Big Thompson system reservoirs and related conveyances, 1969 through 2000

    USGS Publications Warehouse

    Stevens, Michael R.

    2003-01-01

    The U.S. Geological Survey, in an ongoing cooperative monitoring program with the Northern Colorado Water Conservancy District, Bureau of Reclamation, and City of Fort Collins, has collected water-quality data in north-central Colorado since 1969 in reservoirs and conveyances, such as canals and tunnels, related to the Colorado?Big Thompson Project, a water-storage, collection, and distribution system. Ongoing changes in water use among agricultural and municipal users on the eastern slope of the Rocky Mountains in Colorado, changing land use in reservoir watersheds, and other water-quality issues among Northern Colorado Water Conservancy District customers necessitated a reexamination of water-quality trends in the Colorado?Big Thompson system reservoirs and related conveyances. The sampling sites are on reservoirs, canals, and tunnels in the headwaters of the Colorado River (on the western side of the transcontinental diversion operations) and the headwaters of the Big Thompson River (on the eastern side of the transcontinental diversion operations). Carter Lake Reservoir and Horsetooth Reservoir are off-channel water-storage facilities, located in the foothills of the northern Colorado Front Range, for water supplied from the Colorado?Big Thompson Project. The length of water-quality record ranges from approximately 3 to 30 years depending on the site and the type of measurement or constituent. Changes in sampling frequency, analytical methods, and minimum reporting limits have occurred repeatedly over the period of record. The objective of this report was to complete a retrospective water-quality and trend analysis of reservoir profiles, nutrients, major ions, selected trace elements, chlorophyll-a, and hypolimnetic oxygen data from 1969 through 2000 in Lake Granby, Shadow Mountain Lake, and the Granby Pump Canal in Grand County, Colorado, and Horsetooth Reservoir, Carter Lake, Lake Estes, Alva B. Adams Tunnel, and Olympus Tunnel in Larimer County, Colorado

  13. Hip hemiarthroplasty: from Venable and Bohlman to Moore and Thompson.

    PubMed

    Hernigou, Philippe; Quiennec, Steffen; Guissou, Isaac

    2014-03-01

    In 1939, Frederick R. Thompson of New York and Austin T. Moore of South Carolina separately developed replacements for the entire ball of the hip. These were used to treat hip fractures and also certain arthritis cases. This type of hemiarthroplasty addressed the problem of the arthritic femoral head only. The diseased acetabulum (hip socket) was not replaced. This prosthesis consisted of a metal stem that was placed into the marrow cavity of the femur, connected in one piece with a metal ball fitted into the hip socket. Bohlman and Austin T. Moore (1939) collaborated for the fabrication and implantation of a custom made 12-inch-long vitallium (metal alloy invented by Venable) femoral head prosthesis for a patient with a recurrent giant cell tumour. This prosthesis functioned well and later on influenced the development of long stem femoral head prostheses.

  14. On Quispel-Roberts-Thompson extensions and integrable correspondences

    NASA Astrophysics Data System (ADS)

    Grammaticos, B.; Ramani, A.; Tamizhmani, K. M.; Willox, R.

    2011-05-01

    We present several novel examples of an extension of the Quispel-Roberts-Thompson (QRT) mapping in which the coefficients are periodic functions of the independent variable and we prove that for period 2 this extension includes all so-called asymmetric QRT mappings. We establish the integrability of these new mappings by explicitly constructing rational invariants for them, which can be parametrised in terms of elliptic functions. Moreover, we show that the correspondences induced by these conserved quantities are all integrable - i.e., exhibit polynomial growth of the number of images they produce - and we present a conjecture pertaining to the degree of the growth. The case of Hirota-Kimura-Yahagi mappings and their associated correspondences is examined as well and we give examples of integrable correspondences associated with such mappings.

  15. Thompson Receives 2013 Early Career Hydrologic Science Award: Citation

    NASA Astrophysics Data System (ADS)

    Katul, Gabriel

    2014-08-01

    Sally Thompson grew up in Perth, where she was trained as an environmental engineer at the University of Western Australia. She graduated with honors in 2003 and worked for a few years as an environmental engineering consultant. Following the award of the Sir John Monash Fellowship in Australia, Sal accepted the admissions offer from the Nicholas School of the Environment at Duke University in 2006, completing her Ph.D. within 4 years and defending her dissertation in 2010. I was most fortunate to have Sal join me at Duke after an enthusiastic recommendation from Siva. Upon her arrival at Duke University, it was immediately clear to all that Sal is a special person with the remarkable skill of being able to identify the main aspects of a problem and throw at them the best that theory, experiment, and modeling tools offer.

  16. 78 FR 60698 - Safety Zone, Lucas Oil Drag Boat Racing Series; Thompson Bay, Lake Havasu City, AZ.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-10-02

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone, Lucas Oil Drag Boat Racing Series; Thompson... Guard is establishing a temporary safety zone within the navigable waters of Thompson Bay in Lake Havasu... Thompson Bay, Lake Havasu, AZ for The Lucas Oil Drag Boat Racing Series. This safety zone is necessary...

  17. Bedload measurements, East Fork River, Wyoming.

    PubMed

    Leopold, L B; Emmett, W W

    1976-04-01

    A bedload trap in the riverbed provided direct quantitative measurement of debris-transport rate in the East Fork River, Wyoming, a basin of 466 km(2) drainage area. Traction load moves only during the spring snow melt season. Data collected in three spring runoff seasons during which a peak flow of 45 m(3)/s occurred showed that transport rate is correlated with power expenditure of the flowing water and at high flows becomes directly proportional to power as suggested by Bagnold.

  18. Environmental Inventory: Little South Fork Cumberland River.

    DTIC Science & Technology

    1981-11-01

    28 2.2.4.1 Paleo-Indian Tradition ---------- 28 2.2.4.2 Archaic Tradition --------------- 29 2.2.4.3 Woodland Tradition...Soils as Woodland ----------- 128 3.7.4.1 Woodland Suitability Grouping of Soils ------------- 129 3.7.5 Use of the Soils for Wildlife ---------- 133...Stations on the Little South Fork Cumberland River in June and September 1978 and July 1979 - 94 12. Woodland Management Interpretations by Woodland

  19. North Fork Snoqualmie River Basin Wildlife Study.

    DTIC Science & Technology

    1981-03-01

    more recent origin, never having been a natural lake. 118 Shoreline materials arv still in the process of washing into the depths of the South Fork...10-12 Twin Peaks - Philippa Lake 9 12-24 Bessemer Mountain 13 Total 52-55 44-64 , Estimates provided by John Cook (Olympic Taxidermy, Renton, Wash...organisms which use resources efficient- ly. This process results in wildlife populations which are balanced with their environments. When resources

  20. The Little Thompson Observatory Receives the Retired Mt. Wilson 24-inch Telescope

    NASA Astrophysics Data System (ADS)

    Schweitzer, Andrea E.

    2006-12-01

    The Little Thompson Observatory is a community-built E/PO observatory and is a member of the Telescopes in Education (TIE) project. The observatory is located on the grounds of Berthoud High School in northern Colorado. Annually we have approximately 5,000 visitors, which is roughly equal to the population of the small town of Berthoud. During 2006 the LTO received the recently-retired 24-inch telescope from Mount Wilson. To provide a new home for this historic telescope, we are building a second dome and doubling the size of our observatory (all with volunteer labor), as well as refurbishing the telescope. This past year we held a Colorado Project ASTRO-GEO workshop, and used the funding from our NASA ROSS E/PO grant for additional teacher workshops -making use of the baseball-sized meteorite that landed in Berthoud in 2004. The observatory also supported magnet high-school astronomy courses available to students from the surrounding school districts. We thank the NASA ROSS E/PO program for providing funding.

  1. Yielding the bully pulpit: a conversation with Tommy Thompson. Interview by John K Iglehart.

    PubMed

    Thompson, Tommy

    2005-01-01

    In January 2005 Tommy Thompson relinquished the post of secretary of the U.S. Department of Human Services (HHS). Known as being an outspoken defender of his principles throughout his tenure at HHS, Thompson continues that tone in an interview conducted shortly after he left Washington. Topics covered include ways to curb Medicare spending; devote greater attention to preventive health and proper incentives for technology; improve the vaccine infrastructure of the United States and the world; and continue to infuse U.S. foreign policy with what Thompson has termed "medical diplomacy," in an effort to counter the messages of America's enemies.

  2. Environmental Assessment: Construct Mass/Mobility Parking Lot at Grand Forks AFB, North Dakota

    DTIC Science & Technology

    2004-02-13

    2003 ND SHPO Ref.: 97 .. 0527, Draft EA, Mass/Mobility Parking Lot, Grand Forks AFB, ND. Dear Ms. Durako: We have reviewed: Environmental Assessment...specific project. If you have any questions please contact Duane Klinner at (701) 328-3576. Sincerely, cZ:~ Merlan E. Paaverud, Jr. State Historic... we have reviewed the projeet and foresee no identiftable conflict with wildlife or wildlife habitat based on 1M information provided. D .. Q

  3. A COMPREHENSIVE NONPOINT SOURCE FIELD STUDY FOR SEDIMENT, NUTRIENTS AND PATHOGENS IN THE SOUTH FORK BROAD RIVER WATERSHED, GEORGIA

    EPA Science Inventory

    There is an urgent need for EPA to develop protocols for establishing Total Maximum Daily Loads (TMDLs) in streams, lakes and estuaries. A cooperative TMDL field data collection project between ORD and Region 4 is ongoing in the South Fork Broad River Watershed (SFBR), a 245.18 ...

  4. Host-parasitoid dynamics of a generalized Thompson model.

    PubMed

    Schreiber, Sebastian J

    2006-06-01

    A discrete-time host-parasitoid model including host-density dependence and a generalized Thompson escape function is analyzed. This model assumes that parasitoids are egg-limited but not search-limited, and is proven to exhibit five types of dynamics: host failure in which the host goes extinct in the parasitoid's presence or absence, unconditional parasitoid failure in which the parasitoid always goes extinct while the host persists, conditional parasitoid failure in the host and the parasitoid go extinct or coexist depending on the initial host-parasitoid ratio, parasitoid driven extinction in which the parasitoid invariably drives the host to extinction, and coexistence in which the host and parasitoid coexist about a global attractor. The latter two dynamics only occur when the parasitoid's maximal rate of growth exceeds the host's maximal rate of growth. Moreover, coexistence requires parasitism events to be sufficiently aggregated. Small additive noise is proven to alter the dynamical outcomes in two ways. The addition of noise to parasitoid driven extinction results in random outbreaks of the host and parasitoid with varying intensity. Additive noise converts conditional parasitoid failure to unconditional parasitoid failure. Implications for classical biological control are discussed.

  5. The Golden-Thompson inequality: Historical aspects and random matrix applications

    SciTech Connect

    Forrester, Peter J. Thompson, Colin J.

    2014-02-15

    The Golden-Thompson inequality, Tr (e{sup A+B}) ⩽ Tr (e{sup A}e{sup B}) for A, B Hermitian matrices, appeared in independent works by Golden and Thompson published in 1965. Both of these were motivated by considerations in statistical mechanics. In recent years the Golden-Thompson inequality has found applications to random matrix theory. In this article, we detail some historical aspects relating to Thompson's work, giving in particular a hitherto unpublished proof due to Dyson, and correspondence with Pólya. We show too how the 2 × 2 case relates to hyperbolic geometry, and how the original inequality holds true with the trace operation replaced by any unitarily invariant norm. In relation to the random matrix applications, we review its use in the derivation of concentration type lemmas for sums of random matrices due to Ahlswede-Winter, and Oliveira, generalizing various classical results.

  6. Paresev on lakebed with Mercury astronaut Gus Grissom and Dryden test pilot Milt Thompson

    NASA Technical Reports Server (NTRS)

    1962-01-01

    NASA Flight Research Center Paresev 1-A with Mercury Astronaut Gus Grissom (left) and NASA test pilot Milton Thompson. Do you suppose they are wondering if all those clouds will mean a canceled flight?

  7. Community Learning Campus: It Takes a Simple Message to Build a Complex Project

    ERIC Educational Resources Information Center

    Pearson, George

    2012-01-01

    Education Canada asked Tom Thompson, president of Olds College and a prime mover behind the Community Learning Campus (CLC): What were the lessons learned from this unusually ambitious education project? Thompson mentions six lessons he learned from this complex project which include: (1) Dream big, build small, act now; (2) Keep a low profile at…

  8. A description of the hydrologic system and the effects of coal mining on water quality in the East Fork Little Chariton River and the alluvial aquifer between Macon and Huntsville, north-central Missouri

    USGS Publications Warehouse

    Hall, D.C.

    1986-01-01

    The quality of surface and groundwater has been affected by abandoned strip mines and by abandoned underground mines in a 110-sq mi subbasin of the East Fork Little Chariton River. More than 14% of the area was strip mined for coal before 1979. The hydrologic system in the area was investigated and the effects of coal mining on quality of water in the river and alluvial aquifer were analyzed, with major emphasis on defining strip-mining effects. The groundwater gradient was from glacial drift or coal spring to alluvium to the East Fork Little Chariton River, and was greatest in spring and least in fall. Seepage from alluvium to the East Fork Little Chariton River occurs throughout the year, except during drought conditions when the only river flow is water released from Long Branch Lake. In the East Fork Little Chariton River median dissolved-solids concentrations increased from 153 mg/L near Macon to 630 mg/L near Huntsville and median sulfate concentrations increased from 36 mg/L near Macon to 360 mg/L near Huntsville. The median dissolved-solids concentration in water from the alluvium increased from 408 mg/L upstream from the strip mines to 641 mg/L near the mines and median dissolved-sulfate concentration increased from 140 to 350 mg/L. The sulfate-to-chloride ratio, used as the most sensitive indicator of strip-mining effects, increased markedly downstream in the East Fork Little Chariton River and nearby Middle Fork Little Chariton River, which also is affected by strip mining. There were no significant increases in sulfate-to-chloride ratio and dissolved-solids concentrations in comparable nearby subbasins of the Grand, Thompson, and Chariton Rivers where there was no mining. (Author 's abstract)

  9. Bedload measurements, East Fork River, Wyoming

    PubMed Central

    Leopold, Luna B.; Emmett, William W.

    1976-01-01

    A bedload trap in the riverbed provided direct quantitative measurement of debris-transport rate in the East Fork River, Wyoming, a basin of 466 km2 drainage area. Traction load moves only during the spring snow melt season. Data collected in three spring runoff seasons during which a peak flow of 45 m3/s occurred showed that transport rate is correlated with power expenditure of the flowing water and at high flows becomes directly proportional to power as suggested by Bagnold. PMID:16592302

  10. 14. Roaring Fork Motor Nature Trail, Place of a thousand ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    14. Roaring Fork Motor Nature Trail, Place of a thousand drips, view with three culvert pipes. - Great Smoky Mountains National Park Roads & Bridges, Roaring Fork Motor Nature Trail, Between Cherokee Orchard Road & U.S. Route 321, Gatlinburg, Sevier County, TN

  11. 33 CFR 117.315 - New River, South Fork.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false New River, South Fork. 117.315 Section 117.315 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.315 New River, South Fork. (a) The...

  12. South Fork Telephone Switchboard Building, oblique view of (W) and ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Telephone Switchboard Building, oblique view of (W) and (S) sides, view to northeast - Fort McKinley, South Fork Telephone Switchboard Building, South side of Weymouth Way, approximately 100 feet west of East Side Drive, Great Diamond Island, Portland, Cumberland County, ME

  13. South Fork Telephone Switchboard Building, interior west room showing hardwood ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Telephone Switchboard Building, interior west room showing hardwood floor; view south - Fort McKinley, South Fork Telephone Switchboard Building, South side of Weymouth Way, approximately 100 feet west of East Side Drive, Great Diamond Island, Portland, Cumberland County, ME

  14. South Fork Telephone Switchboard Building, oblique view of east side; ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Telephone Switchboard Building, oblique view of east side; view northwest - Fort McKinley, South Fork Telephone Switchboard Building, South side of Weymouth Way, approximately 100 feet west of East Side Drive, Great Diamond Island, Portland, Cumberland County, ME

  15. South Fork Latrine, interior showing head with steel tank mounted ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Latrine, interior showing head with steel tank mounted to wall; view south - Fort McKinley, South Fork Latrine, West side of East Side Drive, approximately 225 feet south of Weymouth Way, Great Diamond Island, Portland, Cumberland County, ME

  16. South Fork Telephone Switchboard Building, general view in setting showing ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    South Fork Telephone Switchboard Building, general view in setting showing (N) side; view (S) - Fort McKinley, South Fork Telephone Switchboard Building, South side of Weymouth Way, approximately 100 feet west of East Side Drive, Great Diamond Island, Portland, Cumberland County, ME

  17. X-15 test pilots - Thompson, Dana, and McKay

    NASA Technical Reports Server (NTRS)

    1966-01-01

    NASA pilots Milton O. Thompson, William H. 'Bill' Dana, and John B. 'Jack' McKay are seen here in front of the #2 X-15 (56-6671) rocket-powered research aircraft. Among them, the three NASA research pilots made 59 flights in the X-15 (14 for Thompson, 16 for Dana, and 29 for McKay). The X-15 was a rocket-powered aircraft 50 ft long with a wingspan of 22 ft. It was a missile-shaped vehicle with an unusual wedge-shaped vertical tail, thin stubby wings, and unique fairings that extended along the side of the fuselage. The X-15 weighed about 14,000 lb empty and approximately 34,000 lb at launch. The XLR-99 rocket engine, manufactured by Thiokol Chemical Corp., was pilot controlled and was capable of developing 57,000 lb of rated thrust (actual thrust reportedly climbed to 60,000 lb). North American Aviation built three X-15 aircraft for the program. The X-15 research aircraft was developed to provide in-flight information and data on aerodynamics, structures, flight controls, and the physiological aspects of high-speed, high-altitude flight. A follow-on program used the aircraft as a testbed to carry various scientific experiments beyond the Earth's atmosphere on a repeated basis. For flight in the dense air of the usable atmosphere, the X-15 used conventional aerodynamic controls such as rudder surfaces on the vertical stabilizers to control yaw and canted horizontal surfaces on the tail to control pitch when moving in synchronization or roll when moved differentially. For flight in the thin air outside of the appreciable Earth's atmosphere, the X-15 used a reaction control system. Hydrogen peroxide thrust rockets located on the nose of the aircraft provided pitch and yaw control. Those on the wings provided roll control. Because of the large fuel consumption, the X-15 was air launched from a B-52 aircraft at 45,000 ft and a speed of about 500 mph. Depending on the mission, the rocket engine provided thrust for the first 80 to 120 sec of flight. The remainder of the

  18. Regulation of Replication Fork Advance and Stability by Nucleosome Assembly

    PubMed Central

    Prado, Felix; Maya, Douglas

    2017-01-01

    The advance of replication forks to duplicate chromosomes in dividing cells requires the disassembly of nucleosomes ahead of the fork and the rapid assembly of parental and de novo histones at the newly synthesized strands behind the fork. Replication-coupled chromatin assembly provides a unique opportunity to regulate fork advance and stability. Through post-translational histone modifications and tightly regulated physical and genetic interactions between chromatin assembly factors and replisome components, chromatin assembly: (1) controls the rate of DNA synthesis and adjusts it to histone availability; (2) provides a mechanism to protect the integrity of the advancing fork; and (3) regulates the mechanisms of DNA damage tolerance in response to replication-blocking lesions. Uncoupling DNA synthesis from nucleosome assembly has deleterious effects on genome integrity and cell cycle progression and is linked to genetic diseases, cancer, and aging. PMID:28125036

  19. DNA Copy Number Control Through Inhibition of Replication Fork Progression

    PubMed Central

    Nordman, Jared T.; Kozhevnikova, Elena N.; Verrijzer, C. Peter; Pindyurin, Alexey V.; Andreyeva, Evgeniya N.; Shloma, Victor V.; Zhimulev, Igor F.; Orr-Weaver, Terry L.

    2014-01-01

    Summary Proper control of DNA replication is essential to ensure faithful transmission of genetic material and to prevent chromosomal aberrations that can drive cancer progression and developmental disorders. DNA replication is regulated primarily at the level of initiation and is under strict cell cycle regulation. Importantly, DNA replication is highly influenced by developmental cues. In Drosophila, specific regions of the genome are repressed for DNA replication during differentiation by the SNF2 domain-containing protein SUUR through an unknown mechanism. We demonstrate that SUUR is recruited to active replication forks and mediates repression of DNA replication by directly inhibiting replication fork progression instead of functioning as a replication fork barrier. Mass-spec identification of SUUR associated proteins identified the replicative helicase member CDC45 as a SUUR-associated protein, supporting a role for SUUR directly at replication forks. Our results reveal that control of eukaryotic DNA copy number can occur through inhibition of replication fork progression. PMID:25437540

  20. Regulation of Replication Fork Advance and Stability by Nucleosome Assembly.

    PubMed

    Prado, Felix; Maya, Douglas

    2017-01-24

    The advance of replication forks to duplicate chromosomes in dividing cells requires the disassembly of nucleosomes ahead of the fork and the rapid assembly of parental and de novo histones at the newly synthesized strands behind the fork. Replication-coupled chromatin assembly provides a unique opportunity to regulate fork advance and stability. Through post-translational histone modifications and tightly regulated physical and genetic interactions between chromatin assembly factors and replisome components, chromatin assembly: (1) controls the rate of DNA synthesis and adjusts it to histone availability; (2) provides a mechanism to protect the integrity of the advancing fork; and (3) regulates the mechanisms of DNA damage tolerance in response to replication-blocking lesions. Uncoupling DNA synthesis from nucleosome assembly has deleterious effects on genome integrity and cell cycle progression and is linked to genetic diseases, cancer, and aging.

  1. Optimal control of information epidemics modeled as Maki Thompson rumors

    NASA Astrophysics Data System (ADS)

    Kandhway, Kundan; Kuri, Joy

    2014-12-01

    We model the spread of information in a homogeneously mixed population using the Maki Thompson rumor model. We formulate an optimal control problem, from the perspective of single campaigner, to maximize the spread of information when the campaign budget is fixed. Control signals, such as advertising in the mass media, attempt to convert ignorants and stiflers into spreaders. We show the existence of a solution to the optimal control problem when the campaigning incurs non-linear costs under the isoperimetric budget constraint. The solution employs Pontryagin's Minimum Principle and a modified version of forward backward sweep technique for numerical computation to accommodate the isoperimetric budget constraint. The techniques developed in this paper are general and can be applied to similar optimal control problems in other areas. We have allowed the spreading rate of the information epidemic to vary over the campaign duration to model practical situations when the interest level of the population in the subject of the campaign changes with time. The shape of the optimal control signal is studied for different model parameters and spreading rate profiles. We have also studied the variation of the optimal campaigning costs with respect to various model parameters. Results indicate that, for some model parameters, significant improvements can be achieved by the optimal strategy compared to the static control strategy. The static strategy respects the same budget constraint as the optimal strategy and has a constant value throughout the campaign horizon. This work finds application in election and social awareness campaigns, product advertising, movie promotion and crowdfunding campaigns.

  2. Bull Trout Population and Habitat Surveys in the Middle Fork Willamette and McKenzie Rivers, Annual Report 2002.

    SciTech Connect

    Seals, Jason; Reis, Kelly

    2003-10-01

    Bull trout in the Willamette River Basin were historically distributed throughout major tributaries including the Middle Fork Willamette and McKenzie rivers. Habitat degradation, over-harvest, passage barriers, fish removal by rotenone, and hybridization and competition with non-native brook trout are all likely factors that have led to the decline of bull trout in the Willamette Basin (Ratliff and Howell 1992). The U.S. Fish and Wildlife Service listed the Columbia River bull trout population segment as Threatened under the federal Endangered Species Act in 1998. Four bull trout populations were isolated in the upper Willamette River following the construction of flood control dams on the South Fork McKenzie River, McKenzie River, and Middle Fork Willamette River that created Cougar, Trail Bridge, and Hills Creek reservoirs. Buchanan et al. (1997) described the population in the main stem McKenzie as 'of special concern', the South Fork McKenzie population as 'high risk of extinction', the population above Trail Bridge Reservoir as 'high risk of extinction', and bull trout in the Middle Fork Willamette as 'probably extinct'. Various management efforts such as strict angling regulations and passage improvement projects have been implemented to stabilize and rehabilitate bull trout habitat and populations in the McKenzie River over the past 10 years. Since 1997, bull trout fry from Anderson Creek on the upper McKenzie River have been transferred to the Middle Fork Willamette basin above Hills Creek Reservoir in an attempt to re-establish a reproducing bull trout population. This project was developed in response to concerns over the population status and management of bull trout in the McKenzie and Middle Fork Willamette Rivers by the Oregon Department of Fish and Wildlife during the early 1990s. The project was conducted under measure 9.3G(2) of the Columbia Basin Fish and Wildlife Program to monitor the status, life history, habitat needs, and limiting factors for

  3. Communication and Control in Organizations: Applying the Work of James Thompson and Gregory Bateson to Interpretive Research.

    DTIC Science & Technology

    1985-07-01

    REPORT. PERIOD C ,EREOa) Communication and Control in Organizations: Iff SDISSERTATION Applying the Work of James Thompson and Gregory Bateson to...PAGE (When Data Entered)g " 813.0 ABSTRACT COMMUNICATION AND CONTROL IN ORGANIZATIONS: APPLYING THE WORK OF JAMES THOMPSON AND GREGORY BATESON TO...examina- tion of the works of James Thompson and Gregory Bateson . -Thus - .he thesis addresses ’problems’ at three interrelated levels: (1) It is an

  4. The Fork+ burnup measurement system: Design and first measurement campaign

    SciTech Connect

    Olson, C.E.; Bronowski, D.R.; McMurtry, W.; Ewing, R.; Jordan, R.; Rivard, D.

    1998-12-31

    Previous work with the original Fork detector showed that burnup as determined by reactor records could be accurately allocated to spent nuclear fuel assemblies. The original Fork detector, designed by Los Alamos National Laboratory, used an ion chamber to measure gross gamma count and a fission chamber to measure neutrons from an activation source, {sup 244}Cm. In its review of the draft Topical Report on Burnup Credit, the US Nuclear Regulatory Commission indicated it felt uncomfortable with a measurement system that depended on reactor records for calibration. The Fork+ system was developed at Sandia National Laboratories under the sponsorship of the Electric Power Research Institute with the aim of providing this independent measurement capability. The initial Fork+ prototype was used in a measurement campaign at the Maine Yankee reactor. The campaign confirmed the applicability of the sensor approach in the Fork+ system and the efficiency of the hand-portable Fork+ prototype in making fuel assembly measurements. It also indicated potential design modifications that will be necessary before the Fork+ can be used effectively on high-burnup spent fuel.

  5. New interpretation of Clarks Fork field, northern Bighorn basin, Montana

    SciTech Connect

    Johnson, J.S.; Lindsley-Griffin, N.

    1986-08-01

    Clarks Fork field is located at the northern edge of the Bighorn basin (T9S, R22E) in Carbon County, Montana. Production was first established in 1944 by General Petroleum Corporation in the Cretaceous Peay Sandstone (basal Frontier) and was later extended to the Cretaceous Greybull (1949) and Lakota (1956) sandstones by British American. Total cumulative hydrocarbons from this field are 1,1789,193 bbl of oil and 3,061,522 mcf of gas, with Lakota sandstones being most productive. Lakota production occurs from a structural-stratigraphic trap in an east-west-trending channel on the axis of Clarks Fork anticline, geographically near the center of the township. Our structural reinterpretation of Clarks Fork field suggests that Elk Basin anticline is a northwest extension of the Elk Basin field anticline. The Elk Basin thrust truncates the north limb of the fold and does not strike to the northwest, as shown by earlier interpretations. They interpret a northwest-striking thrust in the center of the township as a splay off the Elk Basin thrust, and have named it the Clarks Fork thrust. The Clarks Fork anticline is located on the hanging wall of Clarks Fork thrust. Subsurface maps indicate the Clarks Fork area has not been fully developed. Stratigraphic traps in the Lakota and Greybull sandstones are present in several areas of the township. Structural traps in the center and northwest portions of the township may also exist.

  6. Fork gratings based on ferroelectric liquid crystals.

    PubMed

    Ma, Y; Wei, B Y; Shi, L Y; Srivastava, A K; Chigrinov, V G; Kwok, H-S; Hu, W; Lu, Y Q

    2016-03-21

    In this article, we disclose a fork grating (FG) based on the photo-aligned ferroelectric liquid crystal (FLC). The Digital Micro-mirror Device based system is used as a dynamic photomask to generated different holograms. Because of controlled anchoring energy, the photo alignment process offers optimal conditions for the multi-domain FLC alignment. Two different electro-optical modes namely DIFF/TRANS and DIFF/OFF switchable modes have been proposed where the diffraction can be switched either to no diffraction or to a completely black state, respectively. The FLC FG shows high diffraction efficiency and fast response time of 50µs that is relatively faster than existing technologies. Thus, the FLC FG may pave a good foundation toward optical vertices generation and manipulation that could find applications in a variety of devices.

  7. Chemical and biological sensing using tuning forks

    DOEpatents

    Tao, Nongjian; Boussaad, Salah

    2012-07-10

    A device for sensing a chemical analyte is disclosed. The device is comprised of a vibrating structure having first and second surfaces and having an associated resonant frequency and a wire coupled between the first and second surfaces of the vibrating structure, wherein the analyte interacts with the wire and causes a change in the resonant frequency of the vibrating structure. The vibrating structure can include a tuning fork. The vibrating structure can be comprised of quartz. The wire can be comprised of polymer. A plurality of vibrating structures are arranged in an array to increase confidence by promoting a redundancy of measurement or to detect a plurality of chemical analytes. A method of making a device for sensing a chemical analyte is also disclosed.

  8. Determining Absolute Zero Using a Tuning Fork

    NASA Astrophysics Data System (ADS)

    Goldader, Jeffrey D.

    2008-04-01

    The Celsius and Kelvin temperature scales, we tell our students, are related. We explain that a change in temperature of 1°C corresponds to a change of 1 Kelvin and that atoms and molecules have zero kinetic energy at zero Kelvin, -273°C. In this paper, we will show how students can derive the relationship between the Celsius and Kelvin temperature scales using a simple, well-known physics experiment. By making multiple measurements of the speed of sound at different temperatures, using the classic physics experiment of determining the speed of sound with a tuning fork and variable-length tube, they can determine the temperature at which the speed of sound is zero—absolute zero.

  9. Wireless tuning fork gyroscope for biomedical applications

    NASA Astrophysics Data System (ADS)

    Abraham, Jose K.; Varadan, Vijay K.; Whitchurch, Ashwin K.; Sarukesi, K.

    2003-07-01

    This paper presents the development of a Bluetooth enabled wireless tuning fork gyroscope for the biomedical applications, including gait phase detection system, human motion analysis and physical therapy. This gyroscope is capable of measuring rotation rates between -90 and 90 and it can read the rotation information using a computer. Currently, the information from a gyroscope can trigger automobile airbag deployment during rollover, improve the accuracy and reliability of GPS navigation systems and stabilize moving platforms such as automobiles, airplanes, robots, antennas, and industrial equipment. Adding wireless capability to the existing gyroscope could help to expand its applications in many areas particularly in biomedical applications, where a continuous patient monitoring is quite difficult. This wireless system provides information on several aspects of activities of patients for real-time monitoring in hospitals.

  10. Inside the Thompson laboratory during the "cerebellar years" and the continuing cerebellar story.

    PubMed

    Lavond, D G; Wikgren, J; Nokia, M S

    2011-02-01

    This paper is based on the talk by one of the authors (DL) given at the symposium for the retirement of RF Thompson (RF Thompson: A bridge between 20th and 21st century neuroscience). We first make some informal observations of the historical times and research conditions in the Thompson laboratory when the cerebellum was found to play a critical role in eye lid classical conditioning, the "cerebellar years". These conditions influenced our collaborative international program on the phenomenon known as "transfer of training" or "savings". Our research shows that the appearance of "savings" is an artifact of the order of testing, and depends upon the functioning of the contralateral interpositus nucleus (IPN) in a way that is complementary to the role of the IPN in normal eyelid classical conditioning.

  11. Late Holocene environmental changes recorded in the sediments of Lago Thompson, Northern Chilean Patagonia

    NASA Astrophysics Data System (ADS)

    Fagel, Nathalie; Nuttin, Laurence; Bertrand, Sébastien; Borgniet, Geoffrey; Schmidt, Sabine; Araneda, Alberto; Torrejon, Fernando; Urrutia, Roberto

    2010-05-01

    We investigate the sedimentary record of Lago Thompson, a small lake (area 1.1 km2, watershed ~8 km2) located at an elevation of 750 masl in Northern Chilean Patagonia (45.38 °S, 71.47°W). At Present, the climate conditions around the lake are relatively dry, with annual precipitation averaging 500 mm. The goal of this study is to evaluate the natural climate variability over the Last Millennium in Northern Chilean Patagonia and its impact on the environment. The coring site was selected after a bathymetric survey using an echo-sounder. Several short cores were retrieved in 2008 using an Uwitec gravity corer: the length of the cores ranges between 124 and 132 cm. The preliminary age model is based on 4 AMS radiocarbon ages measured on bulk sediment and organic macro-remains. The radiocarbon ages demonstrate that the sediment cores cover the last 850 to 950 years. This sediment record, which is characterized by accumulation rates ranging between 1 and 3 mm/yr, can therefore be studied at decennial to centennial resolution. To reconstruct past changes in climate and the environment, we conducted a multiproxy study combining sedimentological, mineralogical and geochemical analyses (LOI 105, 550 and 950°C, biogenic silica content, magnetic susceptibility, tephrostratigraphy, bulk organic geochemistry, bulk mineralogy by X-ray diffraction, and inorganic geochemistry by ITRAX core scanner and ICP-AES). Visual descriptions and X-ray radiographies demonstrate that the sediment record is relatively undisturbed. The sediment is composed of light brown organic-rich clayey material. The lower part of the core (below 75 cm) is finely laminated whereas the upper part is more homogeneous. Magnetic susceptibility values highlight two tephra layers that represent explosive eruptions of volcanoes from the southern volcanic zone of Chile (Hudson, Cay, or Macá volcanoes). The biogenic silica content of the sediment retrieved in Lago Thompson is high (40 to 80%), and probably

  12. M2-F1 on lakebed with pilots Milt Thompson, Chuck Yeager, Don Mallick, and Bruce Peterson

    NASA Technical Reports Server (NTRS)

    1963-01-01

    After the initial M2-F1 airtow flights, the NASA Flight Research Center used the vehicle to check out other pilots. Bruce Peterson was scheduled to take over as the M2-F1 project pilot from Milt Thompson, while Don Mallick was to be his backup. Col. (later Brig. Gen.) Charles (Chuck) Yeager, then commandant of the Air Force's Aerospace Research Pilots School, wanted to evaluate a possible lifting-body trainer for the school. This photo shows all of these distinguished pilots on or in the M2-F1, with Col. Yeager in the pilot's seat. The lifting body concept evolved in the mid-1950s as researchers considered alternatives to ballistic reentries of piloted space capsules. The designs for hypersonic, wingless vehicles were on the boards at NASA Ames and NASA Langley facilities, while the US Air Force was gearing up for its Dyna-Soar program, which defined the need for a spacecraft that would land like an airplane. Despite favorable research on lifting bodies, there was little support for a flight program. Dryden engineer R. Dale Reed was intrigued with the lifting body concept, and reasoned that some sort of flight demonstration was needed before wingless aircraft could be taken seriously. In February 1962, he built a model lifting body based upon the Ames M2 design, and air-launched it from a radio controlled 'mothership.' Home movies of these flights, plus the support of research pilot Milt Thompson, helped pursuade the facilities director, Paul Bikle, to give the go-ahead for the construction of a full-scale version, to be used as a wind-tunnel model and possibly flown as a glider. Comparing lifting bodies to space capsules, an unofficial motto of the project was, 'Don't be Rescued from Outer Space--Fly Back in Style.' The construction of the M2-F1 was a joint effort by Dryden and a local glider manufacturer, the Briegleb Glider Company. The budget was $30,000. NASA craftsmen and engineers built the tubular steel interior frame. Its mahogany plywood shell was hand

  13. Little Known Facts about the Common Tuning Fork.

    ERIC Educational Resources Information Center

    Ong, P. P.

    2002-01-01

    Explains the physical principles of the tuning fork which has a common use in teaching laboratories. Includes information on its vibration, frequency of vibration, elasticity, and reasons for having two prongs. (YDS)

  14. 17. DETAIL VIEW OF WHAT APPEARS TO BE STIRRING FORK ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    17. DETAIL VIEW OF WHAT APPEARS TO BE STIRRING FORK THAT MIXED COFFEE BEANS AS THEY WERE HUSKED - Hacienda Cafetalera Santa Clara, Coffee Mill, KM 19, PR Route 372, Hacienda La Juanita, Yauco Municipio, PR

  15. 9. VIEW OF WHEEL RACK FOR BORING MILL. Fork loading ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    9. VIEW OF WHEEL RACK FOR BORING MILL. Fork loading crane, manufactured by Cleveland Tramrail, 2-1/2 ton capacity. - Juniata Shops, Erecting Shop & Machine Shop, East of Fourth Avenue, between Fourth & Fifth Streets, Altoona, Blair County, PA

  16. 8. VIEW OF WHEEL RACK FOR BORING MILL. Fork loading ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    8. VIEW OF WHEEL RACK FOR BORING MILL. Fork loading crane, manufactured by Cleveland Tramrail, 2-1/2 ton capacity. - Juniata Shops, Erecting Shop & Machine Shop, East of Fourth Avenue, between Fourth & Fifth Streets, Altoona, Blair County, PA

  17. TRAIP regulates replication fork recovery and progression via PCNA

    PubMed Central

    Feng, Wanjuan; Guo, Yingying; Huang, Jun; Deng, Yiqun; Zang, Jianye; Huen, Michael Shing-Yan

    2016-01-01

    PCNA is a central scaffold that coordinately assembles replication and repair machineries at DNA replication forks for faithful genome duplication. Here, we describe TRAIP (RNF206) as a novel PCNA-interacting factor that has important roles during mammalian replicative stress responses. We show that TRAIP encodes a nucleolar protein that migrates to stalled replication forks, and that this is accomplished by its targeting of PCNA via an evolutionarily conserved PIP box on its C terminus. Accordingly, inactivation of TRAIP or its interaction with the PCNA clamp compromised replication fork recovery and progression, and leads to chromosome instability. Together, our findings establish TRAIP as a component of the mammalian replicative stress response network, and implicate the TRAIP-PCNA axis in recovery of stalled replication forks. PMID:27462463

  18. 9. EEL RIVER SOUTH FORK BRIDGE, OLD HIGHWAY 101. NORTH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    9. EEL RIVER SOUTH FORK BRIDGE, OLD HIGHWAY 101. NORTH OF LEGGETT, HUMBOLDT COUNTY, CALIFORNIA. LOOKING W. - Redwood National & State Parks Roads, California coast from Crescent City to Trinidad, Crescent City, Del Norte County, CA

  19. 8. EEL RIVER SOUTH FORK BRIDGE, OLD HIGHWAY 101. NORTH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    8. EEL RIVER SOUTH FORK BRIDGE, OLD HIGHWAY 101. NORTH OF LEGGETT, HUMBOLDT COUNTY, CALIFORNIA. LOOKING N. - Redwood National & State Parks Roads, California coast from Crescent City to Trinidad, Crescent City, Del Norte County, CA

  20. 117. Laurel Fork Viaduct. Elevation view of this 545 1939 ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    117. Laurel Fork Viaduct. Elevation view of this 545 1939 steel girder viaduct. Example of structure with plain reinforced concrete arches. Looking northwest. - Blue Ridge Parkway, Between Shenandoah National Park & Great Smoky Mountains, Asheville, Buncombe County, NC

  1. Assembly of Slx4 signaling complexes behind DNA replication forks.

    PubMed

    Balint, Attila; Kim, TaeHyung; Gallo, David; Cussiol, Jose Renato; Bastos de Oliveira, Francisco M; Yimit, Askar; Ou, Jiongwen; Nakato, Ryuichiro; Gurevich, Alexey; Shirahige, Katsuhiko; Smolka, Marcus B; Zhang, Zhaolei; Brown, Grant W

    2015-08-13

    Obstructions to replication fork progression, referred to collectively as DNA replication stress, challenge genome stability. In Saccharomyces cerevisiae, cells lacking RTT107 or SLX4 show genome instability and sensitivity to DNA replication stress and are defective in the completion of DNA replication during recovery from replication stress. We demonstrate that Slx4 is recruited to chromatin behind stressed replication forks, in a region that is spatially distinct from that occupied by the replication machinery. Slx4 complex formation is nucleated by Mec1 phosphorylation of histone H2A, which is recognized by the constitutive Slx4 binding partner Rtt107. Slx4 is essential for recruiting the Mec1 activator Dpb11 behind stressed replication forks, and Slx4 complexes are important for full activity of Mec1. We propose that Slx4 complexes promote robust checkpoint signaling by Mec1 by stably recruiting Dpb11 within a discrete domain behind the replication fork, during DNA replication stress.

  2. As-Built documentation of programs to implement the Robertson and Doraiswamy/Thompson models

    NASA Technical Reports Server (NTRS)

    Valenziano, D. J. (Principal Investigator)

    1981-01-01

    The software which implements two spring wheat phenology models is described. The main program routines for the Doraiswamy/Thompson crop phenology model and the basic Robertson crop phenology model are DTMAIN and BRMAIN. These routines read meteorological data files and coefficient files, accept the planting date information and other information from the user, and initiate processing. Daily processing for the basic Robertson program consists only of calculation of the basic Robertson increment of crop development. Additional processing in the Doraiswamy/Thompson program includes the calculation of a moisture stress index and correction of the basic increment of development. Output for both consists of listings of the daily results.

  3. Test pilots 1962 - Armstrong, Walker, Dana, Peterson, McKay, Thompson, Butchart

    NASA Technical Reports Server (NTRS)

    1962-01-01

    The research pilots at what in 1962 was called the Flight Research Center standing in front of the X-1E. They are (left to right) Neil Armstrong, Joe Walker, Bill Dana, Bruce Peterson, Jack McKay, Milt Thompson, and Stan Butchart. of the group, Armstrong, Walker, Dana, McKay and Thompson all flew the X-15. Bruce Peterson flew the M2-F2 and HL-10 lifting bodies, while Stan Butchart was the B-29 drop plane pilot for many of the D-558-II and X-1 series research aircraft.

  4. Environmental Assessment Deicer Recovery at Grand Forks AFB, North Dakota

    DTIC Science & Technology

    2004-12-15

    completed application to this office for further review. We also request the opportunity for complete review of applications for renewal or...NO 58205~6434 September 30, 2004 ND SHPO Ref.: 97 .. Q527av, Draft FONSI, Deicer Recovery Operation, Grand Forks AFB, NO. Dear Ms. Strom: We have...reviewed the Finding ofNo Significant Impact for a deicer recovery operation (draft version) at the Grand Forks Air Force Base, NO. We have no

  5. Environmental Assessment Tent City at Grand Forks AFB, North Dakota

    DTIC Science & Technology

    2004-11-15

    thunderstorms. Winters are long and severe with almost continuous snow cover. The spring and fall seasons are generally short transition periods. The...from the northwest during the late fall, winter, and spring , and from the southeast during the summer. Grand Forks County is included in the ND Air...drainage system. At Manvel, ND, approximately 10 miles northeast of Grand Forks AFB, the mean discharge of the Turtle River is 50.3 feet cubed per

  6. Gas Phase Photoacoustic Spectroscopy in the long-wave IR using Quartz Tuning Forks and Amplitude Modulated Quantum Cascade Lasers

    SciTech Connect

    Wojcik, Michael D.; Phillips, Mark C.; Cannon, Bret D.

    2006-12-31

    A paper to accompany a 20 minute talk about the progress of a DARPA funded project called LPAS. ABSTRACT: We demonstrate the performance of a novel long-wave infrared photoacoustic laser absorbance spectrometer for gas-phase species using an amplitude modulated (AM) quantum cascade (QC) laser and a quartz tuning fork microphone. Photoacoustic signal was generated by focusing the output of a Fabry-Perot QC laser operating at 8.41 micron between the legs of a quartz tuning fork which served as a transducer for the transient acoustic pressure wave. The QC laser was modulated at the resonant frequency of the tuning fork (32.8 kHz). This sensor was calibrated using the infrared absorber Freon-134a by performing a simultanious absorption measurement using a 35 cm absorption cell. The NEAS of this instrument was determined to be 2 x 10^-8 W cm^-1 /Hz^1/2 and the fundamental sensitivity of this technique is limited by the noise floor of the tuning fork itself.

  7. Force regulated dynamics of RPA on a DNA fork

    PubMed Central

    Kemmerich, Felix E.; Daldrop, Peter; Pinto, Cosimo; Levikova, Maryna; Cejka, Petr; Seidel, Ralf

    2016-01-01

    Replication protein A (RPA) is a single-stranded DNA binding protein, involved in most aspects of eukaryotic DNA metabolism. Here, we study the behavior of RPA on a DNA substrate that mimics a replication fork. Using magnetic tweezers we show that both yeast and human RPA can open forked DNA when sufficient external tension is applied. In contrast, at low force, RPA becomes rapidly displaced by the rehybridization of the DNA fork. This process appears to be governed by the binding or the release of an RPA microdomain (toehold) of only few base-pairs length. This gives rise to an extremely rapid exchange dynamics of RPA at the fork. Fork rezipping rates reach up to hundreds of base-pairs per second, being orders of magnitude faster than RPA dissociation from ssDNA alone. Additionally, we show that RPA undergoes diffusive motion on ssDNA, such that it can be pushed over long distances by a rezipping fork. Generally the behavior of both human and yeast RPA homologs is very similar. However, in contrast to yeast RPA, the dissociation of human RPA from ssDNA is greatly reduced at low Mg2+ concentrations, such that human RPA can melt DNA in absence of force. PMID:27016742

  8. Complete Genome Sequences of Two Outbreak Strains of Salmonella enterica subsp. enterica Serovar Thompson Associated with Cilantro

    PubMed Central

    Huynh, Steven; Gorski, Lisa; Cooper, Kerry K.; Miller, William G.

    2015-01-01

    Salmonella enterica subsp. enterica serovar Thompson strains RM1984 (CADPH-99A2334) and RM1986 (CADPH-99A2345) are associated with a 1999 outbreak in contaminated cilantro. We report here the complete genome sequences and annotation of these two S. Thompson strains. These genomes are distinct and provide additional data for our understanding of S. enterica. PMID:26586897

  9. Building on Our Knowledge of Racism, Mental Health, and Mental Health Practice: A Reaction to Thompson and Neville.

    ERIC Educational Resources Information Center

    D'Andrea, Michael; Daniels, Judy

    1999-01-01

    Presents a reaction to Thompson and Neville's (1999) article, "Racism, Mental Health, and Mental Health Practice." Discusses the results of their own longitudinal study of the psychology of White racism to both promote and validate many of the theoretical claims that are presented in Thompson and Neville's article. (GCP)

  10. Complete genomic sequences of two outbreak strains of Salmonella enterica subsp. enterica serovar Thompson associated with cilantro

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Salmonella enterica subsp. enterica serovar Thompson strains RM1984 (CADPH-99A2334) and RM1986 (CADPH -99A2345) are clinical isolates from 1999, putatively related to an outbreak in California from contaminated cilantro. We report the complete genome sequences and annotation of these two S. Thompson...

  11. Best management practices plan for the Lower East Fork Poplar Creek Operable Unit, Oak Ridge, Tennessee

    SciTech Connect

    1996-04-01

    This plan was prepared in support of the Phase II Remedial Design Report (DOE/OR/01-1449&D1) and in accordance with requirements under CERCLA to present the plan for best management practices to be followed during the remediation. This document provides the Environmental Restoration Program with information about spill prevention and control, water quality monitoring, good housekeeping practices, sediment and erosion control measures, and inspections and environmental compliance practices to be used during Phase II of the remediation project for the Lower East Fork Poplar Creek Operable Unit.

  12. Oxbow Conservation Area; Middle Fork John Day River, Annual Report 2001-2002.

    SciTech Connect

    Robertson, Shaun; Smith, Brent; Cochran, Brian

    2003-04-01

    In early 2001, the Confederated Tribes of Warm Springs, through their John Day Basin Office, concluded the acquisition of the Middle Fork Oxbow Ranch. Under a memorandum of agreement with the Bonneville Power Administration (BPA), the Tribes are required to provided BPA an 'annual written report generally describing the real property interests in the Project, HEP analyses undertaken or in progress, and management activities undertaken or in progress'. This report is to be provided to the BPA by 30 April of each year. This is the first annual report filed for the Oxbow Ranch property.

  13. CARBON TRACE GASES IN LAKE AND BEAVER POND ICE NEAR THOMPSON, MANITOBA, CANADA

    EPA Science Inventory

    Concentrations of CO2, CO, and CH4 were measured in beaver pond and lake ice in April 1996 near Thompson, Manitoba to derive information on possible impacts of ice melting on corresponding atmospheric trace gas concentrations. CH4 concentrations in beaver pond and lake ice ranged...

  14. Whose Confession? Which Tradition? (A Preliminary Critique of Penny Thompson, 2004)

    ERIC Educational Resources Information Center

    Doble, Peter

    2005-01-01

    What does Penny Thompson really want? Reading her article in "BJRE" 26 (1) proved a baffling experience: it clearly wanted to say something, and to say it passionately, yet signally failed to do so. It fails largely because it lacks an argument; there seems also to be conceptual muddle at its heart. A fuller critique will need to attend…

  15. Pilot Milt Thompson and the M2-F2 Lifting Body

    NASA Technical Reports Server (NTRS)

    1966-01-01

    Jay L. King, Joseph D. Huxman and Orion D. Billeter assist NASA research pilot Milt Thompson (on the ladder) into the cockpit of the M2-F2 lifting body research aircraft at the NASA Flight Research Center (now the Dryden Flight Research Center). The M2-F2 is attached to a wing pylon under the wing of NASA's B-52 mothership.

  16. 5. PILOTS KNIGHT, RUSHWORTH, ENGLE, THOMPSON, DANA, AND McKAY STANDING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. PILOTS KNIGHT, RUSHWORTH, ENGLE, THOMPSON, DANA, AND McKAY STANDING AT THE NOSE OF X-15 NO. 66671. - Edwards Air Force Base, X-15 Engine Test Complex, Rogers Dry Lake, east of runway between North Base & South Base, Boron, Kern County, CA

  17. "This Strange White World": Race and Place in Era Bell Thompson's "American Daughter"

    ERIC Educational Resources Information Center

    Johnson, Michael K.

    2004-01-01

    Aboard a train heading out of Minneapolis toward frontier North Dakota, Era Bell Thompson in her autobiography "American Daughter" (1946) describes a landscape that grows steadily bleaker with each mile farther west: "Suddenly there was snow--miles and miles of dull, white snow, stretching out to meet the heavy, gray sky; deep banks…

  18. A COMPREHENISVE NONPOINT SOURCE FIELD STUDY FOR SEDIMENT, NUTRIENTS AND PATHOGENS IN THE SOUTH FORK BROAD RIVER WATERSHED IN NORTHEAST GEORGIA

    EPA Science Inventory

    There is an urgent need for EPA to develop protocols for establishing Total Maximum Daily Loads (TMDLs) in streams, lakes and estuaries. A cooperative TMDL field data collection project between ORD and Region 4 is ongoing in the South Fork Broad River Watershed (SFBR), a 245.18 ...

  19. Combined Reverse-Brayton Joule Thompson Hydrogen Liquefaction Cycle

    SciTech Connect

    Shimko, Martin A.; Dunn, Paul M.

    2011-12-31

    The following is a compilation of Annual Progress Reports submitted to the DOE’s Fuel Cell Technologies Office by Gas Equipment Engineering Corp. for contract DE-FG36-05GO15021. The reports cover the project activities from August 2005 through June 2010. The purpose of this project is to produce a pilot-scale liquefaction plant that demonstrates GEECO’s ability to meet or exceed the efficiency targets set by the DOE. This plant will be used as a model to commercialize this technology for use in the distribution infrastructure of hydrogen fuel. It could also be applied to markets distributing hydrogen for industrial gas applications. Extensive modeling of plant performance will be used in the early part of the project to identify the liquefaction cycle architecture that optimizes the twin goals of increased efficiency and reduced cost. The major challenge of the project is to optimize/balance the performance (efficiency) of the plant against the cost of the plant so that the fully amortized cost of liquefying hydrogen meets the aggressive goals set by DOE. This project will design and build a small-scale pilot plant (several hundred kg/day) that will be both a hardware demonstration and a model for scaling to larger plant sizes (>50,000 kg/day). Though an effort will be made to use commercial or near-commercial components, key components that will need development for either a pilot- or full-scale plant will be identified. Prior to starting pilot plant fabrication, these components will be demonstrated at the appropriate scale to demonstrate sufficient performance for use in the pilot plant and the potential to achieve the performance used in modeling the full-scale plant.

  20. Single strand transposition at the host replication fork

    PubMed Central

    Lavatine, Laure; He, Susu; Caumont-Sarcos, Anne; Guynet, Catherine; Marty, Brigitte; Chandler, Mick; Ton-Hoang, Bao

    2016-01-01

    Members of the IS200/IS605 insertion sequence family differ fundamentally from classical IS essentially by their specific single-strand (ss) transposition mechanism, orchestrated by the Y1 transposase, TnpA, a small HuH enzyme which recognizes and processes ss DNA substrates. Transposition occurs by the ‘peel and paste’ pathway composed of two steps: precise excision of the top strand as a circular ss DNA intermediate; and subsequent integration into a specific ssDNA target. Transposition of family members was experimentally shown or suggested by in silico high-throughput analysis to be intimately coupled to the lagging strand template of the replication fork. In this study, we investigated factors involved in replication fork targeting and analysed DNA-binding properties of the transposase which can assist localization of ss DNA substrates on the replication fork. We showed that TnpA interacts with the β sliding clamp, DnaN and recognizes DNA which mimics replication fork structures. We also showed that dsDNA can facilitate TnpA targeting ssDNA substrates. We analysed the effect of Ssb and RecA proteins on TnpA activity in vitro and showed that while RecA does not show a notable effect, Ssb inhibits integration. Finally we discuss the way(s) in which integration may be directed into ssDNA at the replication fork. PMID:27466393

  1. Chk1 promotes replication fork progression by controlling replication initiation.

    PubMed

    Petermann, Eva; Woodcock, Mick; Helleday, Thomas

    2010-09-14

    DNA replication starts at initiation sites termed replication origins. Metazoan cells contain many more potential origins than are activated (fired) during each S phase. Origin activation is controlled by the ATR checkpoint kinase and its downstream effector kinase Chk1, which suppresses origin firing in response to replication blocks and during normal S phase by inhibiting the cyclin-dependent kinase Cdk2. In addition to increased origin activation, cells deficient in Chk1 activity display reduced rates of replication fork progression. Here we investigate the causal relationship between increased origin firing and reduced replication fork progression. We use the Cdk inhibitor roscovitine or RNAi depletion of Cdc7 to inhibit origin firing in Chk1-inhibited or RNAi-depleted cells. We report that Cdk inhibition and depletion of Cdc7 can alleviate the slow replication fork speeds in Chk1-deficient cells. Our data suggest that increased replication initiation leads to slow replication fork progression and that Chk1 promotes replication fork progression during normal S phase by controlling replication origin activity.

  2. Replication fork dynamics and the DNA damage response.

    PubMed

    Jones, Rebecca M; Petermann, Eva

    2012-04-01

    Prevention and repair of DNA damage is essential for maintenance of genomic stability and cell survival. DNA replication during S-phase can be a source of DNA damage if endogenous or exogenous stresses impair the progression of replication forks. It has become increasingly clear that DNA-damage-response pathways do not only respond to the presence of damaged DNA, but also modulate DNA replication dynamics to prevent DNA damage formation during S-phase. Such observations may help explain the developmental defects or cancer predisposition caused by mutations in DNA-damage-response genes. The present review focuses on molecular mechanisms by which DNA-damage-response pathways control and promote replication dynamics in vertebrate cells. In particular, DNA damage pathways contribute to proper replication by regulating replication initiation, stabilizing transiently stalled forks, promoting replication restart and facilitating fork movement on difficult-to-replicate templates. If replication fork progression fails to be rescued, this may lead to DNA damage and genomic instability via nuclease processing of aberrant fork structures or incomplete sister chromatid separation during mitosis.

  3. Geology and ground water resources of Grand Forks County

    USGS Publications Warehouse

    Hansen, Dan E.; Kume, Jack; Kelly, T.E.; Paulson, Q.F.

    1970-01-01

    Grand Forks County in northeastern North Dakota is underlain by glacial drift, westward-dipping Paleozoic and Mesozoic sedimentary rocks and Precambrian igneous and metamorphic rocks. Glacial drift that covers the bedrock reaches a maximum thickness of 455 feet. It can be differentiated into 5 drift sheets, each of which in turn can be separated into till units, lake clay and silt units, and sand and gravel units. Relief on the bedrock surface is much greater than that on the present glacial topography. In western Grand Forks County, the bedrock rises 600 feet from east to west at the Pembina escarpment, whereas the surface elevations rise only 300 feet.

  4. Bank stability and channel width adjustment, East Fork River, Wyoming.

    USGS Publications Warehouse

    Andrews, E.D.

    1982-01-01

    Frequent surveys of eight cross sections located in self-formed reaches of the East Fork River, Wyoming, during the 1974 snowmelt flood showed a close relation between channel morphology and scour and fill. Those cross sections narrower than the mean reach width filled at discharges less than bankfull and scoured at discharges greater than bankfull. Those cross sections wider than the mean reach width scoured at discharges less than bankfull and filled at discharges greater than bankfull. Bank stability, and to some extent the adjustment of stream channel width, in the East Fork River study reach appears to be controlled by the processes of scour and fill. -from Author

  5. Replication Termination: Containing Fork Fusion-Mediated Pathologies in Escherichia coli

    PubMed Central

    Dimude, Juachi U.; Midgley-Smith, Sarah L.; Stein, Monja; Rudolph, Christian J.

    2016-01-01

    Duplication of bacterial chromosomes is initiated via the assembly of two replication forks at a single defined origin. Forks proceed bi-directionally until they fuse in a specialised termination area opposite the origin. This area is flanked by polar replication fork pause sites that allow forks to enter but not to leave. The precise function of this replication fork trap has remained enigmatic, as no obvious phenotypes have been associated with its inactivation. However, the fork trap becomes a serious problem to cells if the second fork is stalled at an impediment, as replication cannot be completed, suggesting that a significant evolutionary advantage for maintaining this chromosomal arrangement must exist. Recently, we demonstrated that head-on fusion of replication forks can trigger over-replication of the chromosome. This over-replication is normally prevented by a number of proteins including RecG helicase and 3’ exonucleases. However, even in the absence of these proteins it can be safely contained within the replication fork trap, highlighting that multiple systems might be involved in coordinating replication fork fusions. Here, we discuss whether considering the problems associated with head-on replication fork fusion events helps us to better understand the important role of the replication fork trap in cellular metabolism. PMID:27463728

  6. 16 CFR 1512.14 - Requirements for fork and frame assembly.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 16 Commercial Practices 2 2010-01-01 2010-01-01 false Requirements for fork and frame assembly... SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Regulations § 1512.14 Requirements for fork and frame assembly. The fork and frame assembly shall be tested for strength by application of a load of 890 N...

  7. 16 CFR 1512.14 - Requirements for fork and frame assembly.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 16 Commercial Practices 2 2011-01-01 2011-01-01 false Requirements for fork and frame assembly... SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Regulations § 1512.14 Requirements for fork and frame assembly. The fork and frame assembly shall be tested for strength by application of a load of 890 N...

  8. 77 FR 39675 - Wallowa-Whitman National Forest, Baker County, OR; North Fork Burnt River Mining

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-05

    ...-Whitman National Forest, Baker County, OR; North Fork Burnt River Mining AGENCY: Forest Service, USDA... North Fork Burnt River Mining Record of Decision will replace and supercede the 2004 North Fork Burnt River Mining Record of Decision only where necessary to address the inadequacies identified by the...

  9. Hydraulic geometry and sediment data for the South Fork Salmon River, Idaho, 1985-86

    USGS Publications Warehouse

    Williams, Rhea P.; O'Dell, Ivalou; Megahan, Walter F.

    1989-01-01

    Hydraulic geometry, suspended-sediment, and bedload samples were collected at three sites in the upper reach of the South Fork Salmon River drainage basin from April 1985 to June 1986. Sites selected were South Fork Salmon River near Krassel Ranger Station, Buckhorn Creek, and North Fork Lick Creek. Results of the data collection are presented in this report.

  10. Francis Thompson (1859-1907): a medical truant and his troubled heart.

    PubMed

    Breathnach, Caoimhghin S

    2008-02-01

    Francis Thompson was born in 1859 in Preston and grew to manhood in Ashton-under-Lyne in Lancashire. After six years registered as a medical student at Owens College, Manchester, he set off for London to retrace the footsteps of Thomas De Quincey (1785-1859). His early experience in London followed closely that of the earlier English Opium Eater until he was rescued by Wilfrid Meynell (1852-1948) who recognized his nascent literary flair. Thompson's poetry earned him respect and reputation and his prose brought him a reasonable income, but he never weaned himself from laudanum and he died of tuberculosis in 1907. Not every truant is honoured by a lapidary inscription in his alma mater, even though he may be overlooked in an arbitrary census.

  11. South Fork Salmon River Watershed Restoration, 2008-2009 Annual Report.

    SciTech Connect

    Reaney, Mark D.

    2009-04-15

    The watershed restoration work elements within the project area, the South Fork Salmon River Watershed, follow the watershed restoration approach adopted by the Nez Perce Tribe Department of Fisheries Resource Management (DFRM) - Watershed Division. The vision of the Nez Perce Tribe DFRM-Watershed Division focuses on protecting, restoring, and enhancing watersheds and treaty resources within the ceded territory of the Nez Perce Tribe under the Treaty of 1855 with the United States Federal Government. The program uses a holistic approach, which encompasses entire watersheds, ridge top to ridge top, emphasizing all cultural aspects and strategies that rely on natural fish production and healthy river ecosystems. The Nez Perce Tribe DFRM-Watershed Division strives towards maximizing historic ecosystem productivity and health for the restoration of anadromous and resident fish populations and the habitat on which all depend on for future generations Originally, this project was funded to create a step/pool stream channel that was appropriate to restore fish passage where the 'Glory Hole Cascade' is currently located at the Stibnite Mine. Due to unforeseen circumstances at the time, the project is unable to move forward as planned and a request for a change in scope of the project and an expansion of the geographic area in which to complete project work was submitted. No additional funds were being requested. The ultimate goal of this project is to work with the holistic, ridge top to ridge top approach to protect and restore the ecological and biological functions of the South Fork Salmon River Watershed to assist in the recovery of threatened and endangered anadromous and resident fish species. FY 2008 Work Elements included two aquatic organism passage (AOP) projects to restore habitat connectivity to two fish-bearing tributaries to the East Fork South Fork Salmon River, Salt and Profile Creeks. The Work Elements also included road survey and assessment activities

  12. Application of the electrostatic Thompson-Lampard theorem to resistivity measurements

    NASA Astrophysics Data System (ADS)

    Mareš, Jiří J.; Hubík, Pavel; Krištofik, Jozef

    2012-04-01

    A method for measurement of resistivity of flat samples and thin layers complementary to the well-known van der Pauw technique has been proposed. The method is based on the application of the Thompson-Lampard theorem of electrostatics used in metrology for the realization of calculable capacitor, according to which a large variety of electrode systems can be designed. A prototypic electrode arrangement is shown on which the practical performance of the method was tested.

  13. Effects of photon noise on speckle image reconstruction with the Knox-Thompson algorithm. [in astronomy

    NASA Technical Reports Server (NTRS)

    Nisenson, P.; Papaliolios, C.

    1983-01-01

    An analysis of the effects of photon noise on astronomical speckle image reconstruction using the Knox-Thompson algorithm is presented. It is shown that the quantities resulting from the speckle average arre biased, but that the biases are easily estimated and compensated. Calculations are also made of the convergence rate for the speckle average as a function of the source brightness. An illustration of the effects of photon noise on the image recovery process is included.

  14. Assessment of the alluvial sediments in the Big Thompson River Valley, Colorado

    USGS Publications Warehouse

    Barnett, Adrienne; Ellefsen, Karl J.

    2000-01-01

    To obtain subsurface geologic information about the alluvium in the Big Thompson River valley, S-wave refraction data were collected along three roads that cross the valley. The refraction data were used to estimate velocities and thickness for a layered-earth model; from these models, three cross sections of the river valley were constructed. These cross sections show the thickness and the gross stratigraphy of the alluvium.

  15. Mechanism of DNA Replication in Drosophila Chromosomes: Structure of Replication Forks and Evidence for Bidirectionality

    PubMed Central

    Kriegstein, Henry J.; Hogness, David S.

    1974-01-01

    The replicating chromosomal DNA in Drosophila melanogaster cleavage nuclei has been visualized in the electron microscope as a serial array of closely spaced replicated regions created by pairs of diverging replication forks. The fine structure of the forks is very similar to that observed for the replication forks of bidirectionally replicating bacteriophage DNAs. However, the mean length of the single-stranded gaps in Drosophila forks is less than 200 nucleotide residues, much shorter than the gaps in phage forks. This difference in gap length corresponds to the observed difference in the size of Okazaki fragments from Drosophila and phage. Images PMID:4204203

  16. Acoustic Doppler current profiling from the JGOFS Arabian sea cruises aboard the RV T.G. Thompson

    SciTech Connect

    Kim, Hyun-Sook; Flagg, C.N.; Shi, Yan

    1996-06-01

    Acoustic Doppler current profiler (ADCP) data is part of the core data for the U.S. JGOFS Arabian Sea project, along with hydrographic and nutrient data. Seventeen cruises are scheduled to take place between September 1994 and January 1996 on the R/V T.G. Thompson. They are numbered consecutively from the ship`s commissioning with the first JGOFS cruise designated TN039. Table 1 lists start and end dates of each cruise with its mission. All but the first cruise have been or will be staged from Muscat, Oman. Each cruise is scheduled for a duration of between two weeks and one month. Seven of the cruises, referred to as process cruises, follow a standard cruise track, taking hydrographic, chemical and biological measurements. The rest of the cruises, which take place generally within the standard cruise region defined by a set track, are for the deployment and recovery of moored equipments and towing of a SeaSoar. ADCP data are collected using an autonomous data acquisition system developed for ship-of-opportunity cruises, named the AutoADCP system. The system is an extension of RD instrument`s DAS version 2.48 using enhancements made possible with {open_quotes}user-exit{close_quotes} programs. It makes it possible to collect ADCP data without the constant monitoring usually necessary and insures constant data coverage and uniform data quality.

  17. 80. Laurel Fork Creek Bridge #2. Example of a concrete ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    80. Laurel Fork Creek Bridge #2. Example of a concrete slab bridge with T beams. It was built in 1937 and the wing walls were faced with stone to blend with its surroundings. Looking northeast. - Blue Ridge Parkway, Between Shenandoah National Park & Great Smoky Mountains, Asheville, Buncombe County, NC

  18. Forks and combs and DNA: the synthesis of branched oligodeoxyribonucleotides.

    PubMed Central

    Horn, T; Urdea, M S

    1989-01-01

    Nucleoside phosphoramidite derivatives containing two protected primary hydroxyl functions have been incorporated into synthetic oligonucleotides as 'branching monomers'. With selective deprotection, multiple identical copies of an additional oligonucleotide can be incorporated to form fork- or comb-like structures for use as signal amplification materials in nucleic acid hybridization assays. Images PMID:2780317

  19. New histone supply regulates replication fork speed and PCNA unloading

    PubMed Central

    Mejlvang, Jakob; Feng, Yunpeng; Alabert, Constance; Neelsen, Kai J.; Jasencakova, Zuzana; Zhao, Xiaobei; Lees, Michael; Sandelin, Albin; Pasero, Philippe; Lopes, Massimo

    2014-01-01

    Correct duplication of DNA sequence and its organization into chromatin is central to genome function and stability. However, it remains unclear how cells coordinate DNA synthesis with provision of new histones for chromatin assembly to ensure chromosomal stability. In this paper, we show that replication fork speed is dependent on new histone supply and efficient nucleosome assembly. Inhibition of canonical histone biosynthesis impaired replication fork progression and reduced nucleosome occupancy on newly synthesized DNA. Replication forks initially remained stable without activation of conventional checkpoints, although prolonged histone deficiency generated DNA damage. PCNA accumulated on newly synthesized DNA in cells lacking new histones, possibly to maintain opportunity for CAF-1 recruitment and nucleosome assembly. Consistent with this, in vitro and in vivo analysis showed that PCNA unloading is delayed in the absence of nucleosome assembly. We propose that coupling of fork speed and PCNA unloading to nucleosome assembly provides a simple mechanism to adjust DNA replication and maintain chromatin integrity during transient histone shortage. PMID:24379417

  20. 27 CFR 9.65 - North Fork of Roanoke.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2014-04-01 2014-04-01 false North Fork of Roanoke. 9.65 Section 9.65 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE BUREAU, DEPARTMENT OF THE TREASURY ALCOHOL AMERICAN VITICULTURAL AREAS Approved American Viticultural Areas §...

  1. 27 CFR 9.65 - North Fork of Roanoke.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2012-04-01 2012-04-01 false North Fork of Roanoke. 9.65 Section 9.65 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE BUREAU, DEPARTMENT OF THE TREASURY LIQUORS AMERICAN VITICULTURAL AREAS Approved American Viticultural Areas §...

  2. 134. FORKS DIVERSION, HIGH LINE AND LOW LINE CANALS, TWIN ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    134. FORKS DIVERSION, HIGH LINE AND LOW LINE CANALS, TWIN FALLS COUNTY, SOUTH OF HANSEN, IDAHO; VIEW OF LOW LINE AND POWER GATES, WEST VIEW. - Milner Dam & Main Canal: Twin Falls Canal Company, On Snake River, 11 miles West of city of Burley, Idaho, Twin Falls, Twin Falls County, ID

  3. 132. FORKS DIVERSION, HIGH LINE AND LOW LINE CANALS, TWIN ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    132. FORKS DIVERSION, HIGH LINE AND LOW LINE CANALS, TWIN FALLS COUNTY, SOUTH OF HANSEN, IDAHO; POWER GATES FOR HYDRO-ELECTRIC. - Milner Dam & Main Canal: Twin Falls Canal Company, On Snake River, 11 miles West of city of Burley, Idaho, Twin Falls, Twin Falls County, ID

  4. Endonuclease EEPD1 Is a Gatekeeper for Repair of Stressed Replication Forks*

    PubMed Central

    Kim, Hyun-Suk; Nickoloff, Jac A.; Wu, Yuehan; Williamson, Elizabeth A.; Sidhu, Gurjit Singh; Reinert, Brian L.; Jaiswal, Aruna S.; Srinivasan, Gayathri; Patel, Bhavita; Kong, Kimi; Burma, Sandeep; Lee, Suk-Hee; Hromas, Robert A.

    2017-01-01

    Replication is not as continuous as once thought, with DNA damage frequently stalling replication forks. Aberrant repair of stressed replication forks can result in cell death or genome instability and resulting transformation to malignancy. Stressed replication forks are most commonly repaired via homologous recombination (HR), which begins with 5′ end resection, mediated by exonuclease complexes, one of which contains Exo1. However, Exo1 requires free 5′-DNA ends upon which to act, and these are not commonly present in non-reversed stalled replication forks. To generate a free 5′ end, stalled replication forks must therefore be cleaved. Although several candidate endonucleases have been implicated in cleavage of stalled replication forks to permit end resection, the identity of such an endonuclease remains elusive. Here we show that the 5′-endonuclease EEPD1 cleaves replication forks at the junction between the lagging parental strand and the unreplicated DNA parental double strands. This cleavage creates the structure that Exo1 requires for 5′ end resection and HR initiation. We observed that EEPD1 and Exo1 interact constitutively, and Exo1 repairs stalled replication forks poorly without EEPD1. Thus, EEPD1 performs a gatekeeper function for replication fork repair by mediating the fork cleavage that permits initiation of HR-mediated repair and restart of stressed forks. PMID:28049724

  5. Fork rotation and DNA precatenation are restricted during DNA replication to prevent chromosomal instability.

    PubMed

    Schalbetter, Stephanie A; Mansoubi, Sahar; Chambers, Anna L; Downs, Jessica A; Baxter, Jonathan

    2015-08-18

    Faithful genome duplication and inheritance require the complete resolution of all intertwines within the parental DNA duplex. This is achieved by topoisomerase action ahead of the replication fork or by fork rotation and subsequent resolution of the DNA precatenation formed. Although fork rotation predominates at replication termination, in vitro studies have suggested that it also occurs frequently during elongation. However, the factors that influence fork rotation and how rotation and precatenation may influence other replication-associated processes are unknown. Here we analyze the causes and consequences of fork rotation in budding yeast. We find that fork rotation and precatenation preferentially occur in contexts that inhibit topoisomerase action ahead of the fork, including stable protein-DNA fragile sites and termination. However, generally, fork rotation and precatenation are actively inhibited by Timeless/Tof1 and Tipin/Csm3. In the absence of Tof1/Timeless, excessive fork rotation and precatenation cause extensive DNA damage following DNA replication. With Tof1, damage related to precatenation is focused on the fragile protein-DNA sites where fork rotation is induced. We conclude that although fork rotation and precatenation facilitate unwinding in hard-to-replicate contexts, they intrinsically disrupt normal chromosome duplication and are therefore restricted by Timeless/Tipin.

  6. Homologous recombination restarts blocked replication forks at the expense of genome rearrangements by template exchange.

    PubMed

    Lambert, Sarah; Mizuno, Ken'ichi; Blaisonneau, Joël; Martineau, Sylvain; Chanet, Roland; Fréon, Karine; Murray, Johanne M; Carr, Antony M; Baldacci, Giuseppe

    2010-08-13

    Template switching induced by stalled replication forks has recently been proposed to underlie complex genomic rearrangements. However, the resulting models are not supported by robust physical evidence. Here, we analyzed replication and recombination intermediates in a well-defined fission yeast system that blocks replication forks. We show that, in response to fork arrest, chromosomal rearrangements result from Rad52-dependent nascent strand template exchange occurring during fork restart. This template exchange occurs by both Rad51-dependent and -independent mechanisms. We demonstrate that Rqh1, the BLM homolog, limits Rad51-dependent template exchange without affecting fork restart. In contrast, we report that the Srs2 helicase promotes both fork restart and template exchange. Our data demonstrate that template exchange occurs during recombination-dependent fork restart at the expense of genome rearrangements.

  7. Termination of DNA replication forks: "Breaking up is hard to do".

    PubMed

    Bailey, Rachael; Priego Moreno, Sara; Gambus, Agnieszka

    2015-01-01

    To ensure duplication of the entire genome, eukaryotic DNA replication initiates from thousands of replication origins. The replication forks move through the chromatin until they encounter forks from neighboring origins. During replication fork termination forks converge, the replisomes disassemble and topoisomerase II resolves the daughter DNA molecules. If not resolved efficiently, terminating forks result in genomic instability through the formation of pathogenic structures. Our recent findings shed light onto the mechanism of replisome disassembly upon replication fork termination. We have shown that termination-specific polyubiquitylation of the replicative helicase component - Mcm7, leads to dissolution of the active helicase in a process dependent on the p97/VCP/Cdc48 segregase. The inhibition of terminating helicase disassembly resulted in a replication termination defect. In this extended view we present hypothetical models of replication fork termination and discuss remaining and emerging questions in the DNA replication termination field.

  8. Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation.

    PubMed

    Bermejo, Rodrigo; Doksani, Ylli; Capra, Thelma; Katou, Yuki-Mori; Tanaka, Hirokazu; Shirahige, Katsuhiko; Foiani, Marco

    2007-08-01

    DNA topoisomerases solve topological problems during chromosome metabolism. We investigated where and when Top1 and Top2 are recruited on replicating chromosomes and how their inactivation affects fork integrity and DNA damage checkpoint activation. We show that, in the context of replicating chromatin, Top1 and Top2 act within a 600-base-pair (bp) region spanning the moving forks. Top2 exhibits additional S-phase clusters at specific intergenic loci, mostly containing promoters. TOP1 ablation does not affect fork progression and stability and does not cause activation of the Rad53 checkpoint kinase. top2 mutants accumulate sister chromatid junctions in S phase without affecting fork progression and activate Rad53 at the M-G1 transition. top1 top2 double mutants exhibit fork block and processing and phosphorylation of Rad53 and gamma H2A in S phase. The exonuclease Exo1 influences fork processing and DNA damage checkpoint activation in top1 top2 mutants. Our data are consistent with a coordinated action of Top1 and Top2 in counteracting the accumulation of torsional stress and sister chromatid entanglement at replication forks, thus preventing the diffusion of topological changes along large chromosomal regions. A failure in resolving fork-related topological constrains during S phase may therefore result in abnormal chromosome transitions, DNA damage checkpoint activation, and chromosome breakage during segregation.

  9. Effects of ambient oxidant air pollution in the San Joaquin Valley on Thompson seedless grapes

    SciTech Connect

    Brewer, R.F.; Ashcroft, R.

    1984-01-01

    Mature Thompson seedless grape vines were enclosed in specially constructed plastic covered chambers supplied with carbon filtered and non-filtered (ambient) air from time of bud break through leaf drop. Effects on vegetative growth and fruiting were determined for three seasons. No effects on fruit production were measured the first season after covering but vegetative growth increased 12% in chambers supplied with filtered air. By the third season fruit yields were 27.5% higher in the filtered as compared with ambient chambers. The only visible symptoms associated with exposure to the oxidants was accelerated senescence which appeared 3 weeks to 1 month earlier on vines receiving ambient or nonfiltered air.

  10. Thompson and Hamilton type IV Freiberg's disease with involvement of multiple epiphyses of both feet.

    PubMed

    Lui, Tun Hing

    2015-02-26

    A 17-year-old boy reported left second and third toe pain after axial loading injury to his left foot. Radiographs showed collapse of the second metatarsal heads and epiphysial irregularities of the fifth metatarsal heads and the condyle of the proximal phalanx of the hallux of both feet. The patient was diagnosed to have Thompson and Hamilton type IV Freiberg's disease. He was screened for epiphysial dysplasia of the other sites. He had on and off bilateral hip and knee pain. Radiographs showed bilateral symmetrical epiphysial abnormalities with morphological change as focal concavity in bilateral femoral heads and fragmentation of the patellar articular surface with preservation of the patellofemoral joint space.

  11. Scanning Probe Microscopy of DNA with a Quartz Tuning Fork

    NASA Astrophysics Data System (ADS)

    King, G. M.; Nunes, G., Jr.

    2001-03-01

    Quartz tuning-forks have recently been put to use as highly sensitive force detectors in atomic force microscopy (AFM).(F.J.Giessibl et al.), Science 289, 422 (2000). In this study we have applied a home-built, tuning-fork based AFM to the investigation of single and double stranded DNA (ssDNA and dsDNA). We operate the microscope in the non-contact mode (typical tip amplitude ~1 nm) with a variety of tips (e.g. Si, Si_3N_4, W). Here we report on recent results showing that the apparent height of plasmid dsDNA on mica substrates depends on both the tip material and imaging frequency shift. This talk will also review our efforts to probe ssDNA with a chemically functionalized tip. Current and future prospects for this dynamic-mode, chemically-sensitive force microscopy technique will be discussed.

  12. A single-element tuning fork piezoelectric linear actuator.

    PubMed

    Friend, James R; Satonobu, Jun; Nakamura, Kentaro; Ueha, Sadayuki; Stutts, Daniel S

    2003-02-01

    This paper describes the design of a piezoelectric tuning-fork, dual-mode motor. The motor uses a single multilayer piezoelectric element in combination with tuning fork and shearing motion to form an actuator using a single drive signal. Finite-element analysis was used in the design of the motor, and the process is described along with the selection of the device's materials and its performance. Swaging was used to mount the multilayer piezoelectric element within the stator. Prototypes of the 25-mm long bidirectional actuator achieved a maximum linear no-load speed of 16.5 cm/s, a maximum linear force of 1.86 N, and maximum efficiency of 18.9%.

  13. Optimal information provision for maximizing flow in a forked lattice.

    PubMed

    Imai, Takeaki; Nishinari, Katsuhiro

    2015-06-01

    In a forked road, the provision of inappropriate information to car drivers sometimes leads to undesirable situations such as one-sided congestion, which is called the hunting phenomenon in real traffic. To address such problems, we propose a forked exclusion model and investigate the behavior of traffic flow in two routes, providing various types of information to a limited number of traveling particles according to the share rate of information. To analytically understand the phenomena, we develop a coarse-grained representation of the model. By analyzing the model, we find the most effective types of information to minimize particles' travel time and the existence of an optimal share rate according to route conditions.

  14. Optimal information provision for maximizing flow in a forked lattice

    NASA Astrophysics Data System (ADS)

    Imai, Takeaki; Nishinari, Katsuhiro

    2015-06-01

    In a forked road, the provision of inappropriate information to car drivers sometimes leads to undesirable situations such as one-sided congestion, which is called the hunting phenomenon in real traffic. To address such problems, we propose a forked exclusion model and investigate the behavior of traffic flow in two routes, providing various types of information to a limited number of traveling particles according to the share rate of information. To analytically understand the phenomena, we develop a coarse-grained representation of the model. By analyzing the model, we find the most effective types of information to minimize particles' travel time and the existence of an optimal share rate according to route conditions.

  15. Environmental Assessment: Demolish 452 at Grand Forks Air Force Base

    DTIC Science & Technology

    2005-12-01

    humid with frequent thunderstorms. Winters are long and severe with almost continuous snow cover. The spring and fall seasons are generally short...direction is generally from the northwest during the late fall, winter, and spring , and from the southeast during the summer. Grand Forks County is...to Lake Winnipeg, Canada. The Red River drainage basin is part of the Hudson Bay drainage system. At Manvel, ND, approximately 10 miles northeast

  16. Geomorphological Analysis of North Fork, Toutle River, Washington: 1980- 1984

    DTIC Science & Technology

    1994-03-01

    north flank of Mount St. Helens and included glacial ice, modern dacite dome, and a mixture of andesite and minor amounts of basalt lava flows...and basalt form the former domes. During emplacement this deposit also consisted of snow and large blocks of ice from the glaciers on the north flank of...north side of Mount St. Helens. Consequently,the North Fork Unit features as its dominant 23 materials the dark colored mixed basalt deposits and the

  17. Environmental Assessment Housing Transfer at Grand Forks AFB, North Dakota

    DTIC Science & Technology

    2005-01-27

    tallgrass prairie that once was dominant in this region. Plants thriving in this preserve include western wheatgrass, slender wheatgrass, big bluestem...Palustrine Forested type wetlands. Vegetation is robust at GFAFB wetlands, and they are characterized as typical prairie potholes found within the...grassland and wetland habitats for wildlife in Grand Forks County. Pastures, meadows, and other non-cultivated areas create a prairie -land mosaic

  18. East Fork Watershed Cooperative: Toward better system-scale ...

    EPA Pesticide Factsheets

    The East Fork Watershed Cooperative is a group intent on understanding how to best manage water quality in a large mixed-use Midwestern watershed system. The system contains a reservoir that serves as a source of drinking water and is popular for water recreation. The reservoir is experience harmful algal blooms. The system including the reservoir has become a significant case study for EPA ORD research and development. The Cooperative includes affiliates from the USACE, the OHIO EPA, the USGS, the USDA, and local Soil and Water Conservation districts as well as utility operators and water quality protection offices. The presentation includes a description of the water quality monitoring and modeling program in the watershed, followed by the results of using the watershed model to estimate the costs associated with nutrient reduction to Harsha Lake, and then ends with an explanation of temporal changes observed for important factors controlling harmful algae in Harsha Lake and how this lake relates to other reservoirs in the Ohio River Basin. This presentation is an invited contribution to the Ohio River Basin Water Quality Workshop sponsored by the US ACE and the US EPA. The presentation describes the activities of the East Fork Watershed Cooperative and the knowledge it has gained to help better manage a case study watershed system over the last few years. The East Fork of the Little Miami River is the focal watershed. It is a significant tributary to the Lit

  19. Replication patterns and organization of replication forks in Vibrio cholerae.

    PubMed

    Stokke, Caroline; Waldminghaus, Torsten; Skarstad, Kirsten

    2011-03-01

    We have investigated the replication patterns of the two chromosomes of the bacterium Vibrio cholerae grown in four different media. By combining flow cytometry and quantitative real-time PCR with computer simulations, we show that in rich media, V. cholerae cells grow with overlapping replication cycles of both the large chromosome (ChrI) and the small chromosome (ChrII). In Luria-Bertani (LB) medium, initiation occurs at four copies of the ChrI origin and two copies of the ChrII origin. Replication of ChrII was found to occur at the end of the ChrI replication period in all four growth conditions. Novel cell-sorting experiments with marker frequency analysis support these conclusions. Incubation with protein synthesis inhibitors indicated that the potential for initiation of replication of ChrII was present at the same time as that of ChrI, but was actively delayed until much of ChrI was replicated. Investigations of the localization of SeqA bound to new DNA at replication forks indicated that the forks were co-localized in pairs when cells grew without overlapping replication cycles and in higher-order structures during more rapid growth. The increased degree of fork organization during rapid growth may be a means by which correct segregation of daughter molecules is facilitated.

  20. Research Pilot Milt Thompson in M2-F2 Aircraft Attached to B-52 Mothership

    NASA Technical Reports Server (NTRS)

    1966-01-01

    NASA research pilot Milt Thompson sits in the M2-F2 'heavyweight' lifting body research vehicle before a 1966 test flight. The M2-F2 and the other lifting-body designs were all attached to a wing pylon on NASA's B-52 mothership and carried aloft. The vehicles were then drop-launched and, at the end of their flights, glided back to wheeled landings on the dry lake or runway at Edwards AFB. The lifting body designs influenced the design of the Space Shuttle and were also reincarnated in the design of the X-38 in the 1990s. NASA B-52, Tail Number 008, is an air launch carrier aircraft, 'mothership,' as well as a research aircraft platform that has been used on a variety of research projects. The aircraft, a 'B' model built in 1952 and first flown on June 11, 1955, is the oldest B-52 in flying status and has been used on some of the most significant research projects in aerospace history. Some of the significant projects supported by B-52 008 include the X-15, the lifting bodies, HiMAT (highly maneuverable aircraft technology), Pegasus, validation of parachute systems developed for the space shuttle program (solid-rocket-booster recovery system and the orbiter drag chute system), and the X-38. The B-52 served as the launch vehicle on 106 X-15 flights and flew a total of 159 captive-carry and launch missions in support of that program from June 1959 to October 1968. Information gained from the highly successful X-15 program contributed to the Mercury, Gemini, and Apollo human spaceflight programs as well as space shuttle development. Between 1966 and 1975, the B-52 served as the launch aircraft for 127 of the 144 wingless lifting body flights. In the 1970s and 1980s, the B-52 was the launch aircraft for several aircraft at what is now the Dryden Flight Research Center, Edwards, California, to study spin-stall, high-angle-of attack, and maneuvering characteristics. These included the 3/8-scale F-15/spin research vehicle (SRV), the HiMAT (Highly Maneuverable Aircraft

  1. Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition.

    PubMed

    Berti, Matteo; Ray Chaudhuri, Arnab; Thangavel, Saravanabhavan; Gomathinayagam, Shivasankari; Kenig, Sasa; Vujanovic, Marko; Odreman, Federico; Glatter, Timo; Graziano, Simona; Mendoza-Maldonado, Ramiro; Marino, Francesca; Lucic, Bojana; Biasin, Valentina; Gstaiger, Matthias; Aebersold, Ruedi; Sidorova, Julia M; Monnat, Raymond J; Lopes, Massimo; Vindigni, Alessandro

    2013-03-01

    Topoisomerase I (TOP1) inhibitors are an important class of anticancer drugs. The cytotoxicity of TOP1 inhibitors can be modulated by replication fork reversal through a process that requires poly(ADP-ribose) polymerase (PARP) activity. Whether regressed forks can efficiently restart and what factors are required to restart fork progression after fork reversal are still unknown. We have combined biochemical and EM approaches with single-molecule DNA fiber analysis to identify a key role for human RECQ1 helicase in replication fork restart after TOP1 inhibition that is not shared by other human RecQ proteins. We show that the poly(ADP-ribosyl)ation activity of PARP1 stabilizes forks in the regressed state by limiting their restart by RECQ1. These studies provide new mechanistic insights into the roles of RECQ1 and PARP in DNA replication and offer molecular perspectives to potentiate chemotherapeutic regimens based on TOP1 inhibition.

  2. Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition

    PubMed Central

    Berti, Matteo; Chaudhuri, Arnab Ray; Thangavel, Saravanabhavan; Gomathinayagam, Shivasankari; Kenig, Sasa; Vujanovic, Marko; Odreman, Federico; Glatter, Timo; Graziano, Simona; Mendoza-Maldonado, Ramiro; Marino, Francesca; Lucic, Bojana; Biasin, Valentina; Gstaiger, Matthias; Aebersold, Ruedi; Sidorova, Julia M.; Monnat, Raymond J.; Lopes, Massimo; Vindigni, Alessandro

    2014-01-01

    SUMMARY Topoisomerase I (TOP1) inhibitors are an important class of anticancer drugs. The cytotoxicity of TOP1 inhibitors can be modulated by replication fork reversal, in a process that requires PARP activity. Whether regressed forks can efficiently restart and the factors required to restart fork progression after fork reversal are still unknown. Here we combined biochemical and electron microscopy approaches with single-molecule DNA fiber analysis, to identify a key role for human RECQ1 helicase in replication fork restart after TOP1 inhibition, not shared by other human RecQ proteins. We show that the poly(ADPribosyl)ation activity of PARP1 stabilizes forks in their regressed state by limiting their restart by RECQ1. These studies provide new mechanistic insights into the roles of RECQ1 and PARP in DNA replication and offer molecular perspectives to potentiate chemotherapeutic regimens based on TOP1 inhibition. PMID:23396353

  3. Large outbreak of Salmonella Thompson related to smoked salmon in the Netherlands, August to December 2012.

    PubMed

    Friesema, I; de Jong, A; Hofhuis, A; Heck, M; van den Kerkhof, H; de Jonge, R; Hameryck, D; Nagel, K; van Vilsteren, G; van Beek, P; Notermans, D; van Pelt, W

    2014-10-02

    On 15 August 2012, an increase in the number of Salmonella Thompson cases was noticed by the Salmonella surveillance in the Netherlands. A case–control study was performed, followed by a food investigation. In total 1,149 cases were laboratory-confirmed between August and December 2012 of which four elderly (76–91 years) were reported to have died due to the infection. The cause of the outbreak was smoked salmon processed at a single site. The smoked salmon had been continuously contaminated in the processing lines through reusable dishes, which turned out to be porous and had become loaded with bacteria. This is the largest outbreak of salmonellosis ever recorded in the Netherlands. The temporary closure of the processing site and recall of the smoked salmon stopped the outbreak. An estimated four to six million Dutch residents were possibly exposed to the contaminated smoked salmon and an estimated 23,000 persons would have had acute gastroenteritis with S. Thompson during this outbreak. This outbreak showed that close collaboration between diagnostic laboratories, regional public health services, the national institute for public health and the food safety authorities is essential in outbreak investigations.

  4. Evaluation of the Dallas Thompson Riverscreen Site on the Touchet River.

    SciTech Connect

    Chamness, Mickie

    2007-07-25

    Riverscreen irrigation pumps are a relatively new design in which the pump intake floats on the river surface, pulling water in only from the bottom side and surrounded by a self-cleaning screen. The Walla Walla County Conservation District recently started replacing old pump screens with the Riverscreen and was interested in whether the screens are protective of juvenile salmonids. Pacific Northwest National Laboratory evaluated approach velocities and operations at the Riverscreen installation on the Dallas Thompson property, approximately 3 mi. north of Touchet, Washington and 300 ft north of Hofer Dam, on June 18, 2007. Evaluation of this site consisted of underwater videography and water velocity measurements. The Dallas Thompson Riverscreen was pumping approximately 930 gpm during our evaluation, which is close to the maximum pumping rate for this model. Underwater videography showed only slow movement of water-borne particulates toward the pump intake, and the screen material was clean. All water velocity measurements were taken below the pump intake opening and between 3 to 6 in. from the screen face. All approach velocities (flow toward the screen and pump) were below National Marine Fisheries Service draft guidelines for juvenile fish screens.

  5. Test pilots 1962 - Thompson, McKay, Dana, Armstrong, Peterson, Butchart, Walker

    NASA Technical Reports Server (NTRS)

    1962-01-01

    A group photo of NASA research pilots at the front door of the Flight Research Center headquarters building. In the front row are (left to right) Milt Thompson, Jack McKay, and Bill Dana. All three flew the X-15, and Thompson and Dana were also involved in the lifting body flights. McKay was injured in a crash landing in X-15 #2. Although he recovered, the injuries eventually forced him to retire from research flying. In the back row (left to right) are Neil Armstrong, Bruce Peterson, Stanley Butchart, and Joe Walker. Armstrong and Walker also both flew the X-15. Soon after this photo was taken, Armstrong was selected as an astronaut, and seven years later became the first man to walk on the Moon. Walker made the highest flight in the X-15, reaching 354,200 feet. He then went on to fly the Lunar Landing Research Vehicle, and was killed on June 8, 1966 when his F-104N collided with the XB-70. Peterson made the first flight in the HL-10 lifting body, and was later badly injured in the crash of the M2-F2 lifting body. Butchart flew a wide range of research missions in the 1950s, and was the B-29 drop plane pilot for a number of rocket flight.

  6. Rad51-mediated replication fork reversal is a global response to genotoxic treatments in human cells

    PubMed Central

    Zellweger, Ralph; Dalcher, Damian; Mutreja, Karun; Berti, Matteo; Schmid, Jonas A.; Herrador, Raquel; Vindigni, Alessandro

    2015-01-01

    Replication fork reversal protects forks from breakage after poisoning of Topoisomerase 1. We here investigated fork progression and chromosomal breakage in human cells in response to a panel of sublethal genotoxic treatments, using other topoisomerase poisons, DNA synthesis inhibitors, interstrand cross-linking inducers, and base-damaging agents. We used electron microscopy to visualize fork architecture under these conditions and analyzed the association of specific molecular features with checkpoint activation. Our data identify replication fork uncoupling and reversal as global responses to genotoxic treatments. Both events are frequent even after mild treatments that do not affect fork integrity, nor activate checkpoints. Fork reversal was found to be dependent on the central homologous recombination factor RAD51, which is consistently present at replication forks independently of their breakage, and to be antagonized by poly (ADP-ribose) polymerase/RECQ1-regulated restart. Our work establishes remodeling of uncoupled forks as a pivotal RAD51-regulated response to genotoxic stress in human cells and as a promising target to potentiate cancer chemotherapy. PMID:25733714

  7. The fork and the kinase: a DNA replication tale from a CHK1 perspective.

    PubMed

    González Besteiro, Marina A; Gottifredi, Vanesa

    2015-01-01

    Replication fork progression is being continuously hampered by exogenously introduced and naturally occurring DNA lesions and other physical obstacles. Checkpoint kinase 1 (Chk1) is activated at replication forks that encounter damaged DNA. Subsequently, Chk1 inhibits the initiation of new replication factories and stimulates the firing of dormant origins (those in the vicinity of stalled forks). Chk1 also avoids fork collapse into DSBs (double strand breaks) and promotes fork elongation. At the molecular level, the current model considers stalled forks as the site of Chk1 activation and the nucleoplasm as the location where Chk1 phosphorylates target proteins. This model certainly serves to explain how Chk1 modulates origin firing, but how Chk1 controls the fate of stalled forks is less clear. Interestingly, recent reports demonstrating that Chk1 phosphorylates chromatin-bound proteins and even holds kinase-independent functions might shed light on how Chk1 contributes to the elongation of damaged DNA. Indeed, such findings have unveiled a puzzling connection between Chk1 and DNA lesion bypass, which might be central to promoting fork elongation and checkpoint attenuation. In summary, Chk1 is a multifaceted and versatile signaling factor that acts at ongoing forks and replication origins to determine the extent and quality of the cellular response to replication stress.

  8. Cultural Resource Investigation of the Grand Forks/East Grand Forks Urban Study and the East Grand Forks Flood Control Project,

    DTIC Science & Technology

    1981-04-01

    Proposed Absorption Bed Site at the City of Avoca , Mu~rray County, Minnesota; Toltz, King, DuvUal, Anderson and Associates, Inc.; Archaeological Field...Archaeological Reconnaissance Survey of a Proposed Absorption Bed Site at the City of Avoca , Murray County, Minnesota; Toltz, King, Duvall, Anderson and

  9. Effect of heat treatment, pH, sugar concentration, and metal addition on green color retention in homogenized puree of Thompson seedless grape

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Homogenized puree of Thompson seedless (Vitis vinifera ‘Thompson Seedless’) grape was treated under different conditions, including heating time (5-30 min), temperature (20-80°C) and pH (2-10). Treatments with separate additions of glucose, fructose, and sucrose at concentrations of 100-600 g/L and ...

  10. Middle Fork and Upper Salmon River Habitat Improvement Implementation Plan, FY 1988-1992.

    SciTech Connect

    Andrews, John; Everson, Larry B.

    1988-02-01

    This document presents an implementation plan for completing the phase II portion of the Middle Fork and Upper Salmon River Habitat Improvement Agreement. Underseeding of spawning adult salmon and steelhead, high instream sediment levels, a lack of habitat diversity in the form of overhanging riparian vegetation and edge, and barriers to both adult and juvenile anadromous fish migration were identified as the principal factors limiting anadromous fish production in the project area. Underseeding is being addressed in other projects sponsored and funded by the Bonneville Power Administration while this implementation plan lays out a schedule for resolving the other identified limiting factors. The primary goal of this program is to increase the quality and quantity of anadromous fish habitat (spring chinook and summer steelhead) with an emphasis on the survival of the wild stocks. This goal will be achieved by reducing the impact of sediment loading, improving riparian vegetation, eliminating passage barriers, and increasing habitat diversity. Meeting the above goal will provide off-site mitigation under the manadate of the pacific northwest electric power planning and conservation act of 1980. Project implementation will follow measures in the Northwest Power Council's Columbia River Fish and Wildlife Program. 9 refs., 3 figs., 5 tabs.

  11. Factors predisposing to dislocation of the Thompson hemiarthroplasty: 22 dislocations in 338 patients.

    PubMed

    Pajarinen, Jarkko; Savolainen, Vesa; Tulikoura, Ilkka; Lindahl, Jan; Hirvensalo, Eero

    2003-02-01

    In a series of 338 patients, we have retrospectively analyzed technical and anatomical factors, which may predispose to a dislocation of the Thompson hemiprosthesis. 22 patients (7%) had at least 1 dislocation during the 6-month follow-up. The most significant independent factor predisposing to dislocation was the use of a posterior approach (dislocation rate 16%). We examined the radiographs and data on operations in the 22 patients, using 79 random patients without dislocation as controls. Factors correlating with an increase in the incidence of dislocation were the length of the residual femoral neck > 0.5 cm in short patients (< 165 cm), and considerable change in the postoperative offset of the hip. Acetabular measurements showed no correlation to the dislocation. Our findings suggest that the main factors predicting dislocation are technical and not related to anatomical measurements.

  12. Moore-Gibson-Thompson equation with memory, part I: exponential decay of energy

    NASA Astrophysics Data System (ADS)

    Lasiecka, Irena; Wang, Xiaojun

    2016-04-01

    We are interested in the Moore-Gibson-Thompson equation with memory τ{u}_{ttt}+ α u_{tt}+c2Au+bAu_t -int_0tg(t-s)A w(s){d}s=0. This model arises in high-frequency ultrasound applications accounting for thermal flux and molecular relaxation times. According to revisited extended irreversible thermodynamics, thermal flux relaxation leads to the third-order derivative in time while molecular relaxation leads to non-local effects governed by memory terms. The resulting model is of hyperbolic type with viscous effects. We first classify the memory into three types. Then, we study how a memory term creates damping mechanism and how the memory causes energy decay even in the cases when the original memoryless system is unstable.

  13. Comparison of Stream Restoration and Vegetation Restoration on Stream Temperature in the Middle Fork John Day River, Oregon

    NASA Astrophysics Data System (ADS)

    Diabat, M.; Wondzell, S. M.; Haggerty, R.

    2013-12-01

    Stream temperature is an important component of aquatic ecosystems. During the past century, various anthropogenic activities (such as timber harvest, mining, and agriculture) reduced riparian vegetation and channel complexity along many streams around the world. As a result, stream temperature increased and suitable habitat for cool- and cold-water organisms declined. Stream temperatures are expected to increase even more under future climate. The effects of warmer climate and anthropogenic activities are proposed to be mitigated by restoration projects aimed to reduce stream temperatures. Common restoration practices are replanting natural vegetation along stream banks and restoring channel complexity. The Middle Fork John Day River, in northeastern Oregon, USA is an example of such a process. We modeled stream temperature along a 37-km section of the Middle Fork John Day River for current and projected conditions of climate, restored riparian vegetation along 6.6-km, and restored channel meanders along 1.5 km. Preliminary simulations suggest that if current riparian vegetation remains unchanged, an average summertime air warming of 4°C increased the 7-day average daily maximum (7DADM) by about 1.3°C. However, restored riparian vegetation reduced the 7DADM by about 0.7°C relative to the current temperature. Restored channel meanders reduced the 7DADM by less than 0.05°C relative to the current temperature. These preliminary simulations assume no hyporheic exchange and riparian vegetation that is 10 m tall and has 30% canopy density.

  14. Grand Forks - East Grand Forks Urban Water Resources Study. Flood Control Appendix.

    DTIC Science & Technology

    1981-07-01

    was separated into six separate reaches as listed below and shown on figure 1. Reach I - South city limits to Almonte Avenue. This reach includes...project. Reach 2 - Almonte Avenue to Seventh Avenue South extended. This reach covers the existing Lincoln Park levee/floodwall project. Reach 3...floodwall [3] with an average height of 5.4 feet extending from Almonte Avenue extended eastward to the existing Lincoln Park floodwall. They would also

  15. MIDDLE FORK OF THE JUDITH RIVER WILDERNESS STUDY AREA, MONTANA.

    USGS Publications Warehouse

    Reynolds, Mitchell W.; Hamilton, Michael

    1984-01-01

    The Middle Fork of the Judith River Wilderness Study Area in Montana has several prospects containing local small inferred resources and several exposed mineral occurrences bearing silver, lead, copper, and gold along its north and west edges with no identified resource potential. Geologic, geophysical, and geochemical studies, conducted to appraise the mineral resources of the study area, identified no other anomalous concentrations of metallic elements. A gem-quality sapphire resource, present near the east boundary, cannot be identified within the study area. The area holds little promise for the occurrence of other mineral or energy resources.

  16. Evaluation of Lower East Fork Poplar Creek Mercury Sources

    SciTech Connect

    Watson, David B.; Brooks, Scott C.; Mathews, Teresa J.; Bevelhimer, Mark S.; DeRolph, Chris; Brandt, Craig C.; Peterson, Mark J.; Ketelle, Richard

    2016-06-01

    This report summarizes a 3-year research project undertaken to better understand the nature and magnitude of mercury (Hg) fluxes in East Fork Poplar Creek (EFPC). This project addresses the requirements of Action Plan 1 in the 2011 Oak Ridge Reservation-wide Comprehensive Environmental Response, Compensation, and Liability Act Five Year Review (FYR). The Action Plan is designed to address a twofold 2011 FYR issue: (1) new information suggests mobilization of mercury from the upper and lower EFPC streambeds and stream banks is the primary source of mercury export during high-flow conditions, and (2) the current Record of Decision did not address the entire hydrologic system and creek bank or creek bed sediments. To obtain a more robust watershed-scale understanding of mercury sources and processes in lower EFPC (LEFPC), new field and laboratory studies were coupled with existing data from multiple US Department of Energy programs to develop a dynamic watershed and bioaccumulation model. LEFPC field studies for the project focused primarily on quantification of streambank erosion and an evaluation of mercury dynamics in shallow groundwater adjacent to LEFPC and potential connection to the surface water. The approach to the stream bank study was innovative in using imagery from kayak floats’ surveys from the headwaters to the mouth of EFPC to estimate erosion, coupled with detailed bank soil mercury analyses. The goal of new field assessments and modeling was to generate a more holistic and quantitative understanding of the watershed and the sources, flux, concentration, transformation, and bioaccumulation of inorganic mercury (IHg) and methylmercury (MeHg). Model development used a hybrid approach that dynamically linked a spreadsheet-based physical and chemical watershed model to a systems dynamics, mercury bioaccumulation model for key fish species. The watershed model tracks total Hg and MeHg fluxes and concentrations by examining upstream inputs, floodplain

  17. INTEGRATED OUTCROP AND SUBSURFACE STUDIES OF THE INTERWELL ENVIRONMENT OF CARBONATE RESERVOIRS: CLEAR FORK (LEONARDIAN-AGE) RESERVOIRS, WEST TEXAS AND NEW MEXICO

    SciTech Connect

    F. Jerry Lucia

    2002-01-31

    This is the final report of the project ''Integrated Outcrop and Subsurface Studies of the Interwell Environment of Carbonate Reservoirs: Clear Fork (Leonardian-Age) Reservoirs, West Texas and New Mexico'', Department of Energy contract no. DE-AC26-98BC15105 and is the third in a series of similar projects funded jointly by the U.S. Department of Energy and The University of Texas at Austin, Bureau of Economic Geology, Reservoir Characterization Research Laboratory for Carbonates. All three projects focus on the integration of outcrop and subsurface data for the purpose of developing improved methods for modeling petrophysical properties in the interwell environment. The first project, funded by contract no. DE-AC22-89BC14470, was a study of San Andres outcrops in the Algerita Escarpment, Guadalupe Mountains, Texas and New Mexico, and the Seminole San Andres reservoir, Permian Basin. This study established the basic concepts for constructing a reservoir model using sequence-stratigraphic principles and rock-fabric, petrophysical relationships. The second project, funded by contract no. DE-AC22-93BC14895, was a study of Grayburg outcrops in the Brokeoff Mountains, New Mexico, and the South Cowden Grayburg reservoir, Permian Basin. This study developed a sequence-stratigraphic succession for the Grayburg and improved methods for locating remaining hydrocarbons in carbonate ramp reservoirs. The current study is of the Clear Fork Group in Apache Canyon, Sierra Diablo Mountains, West Texas, and the South Wasson Clear Fork reservoir, Permian Basin. The focus was on scales of heterogeneity, imaging high- and low-permeability layers, and the impact of fractures on reservoir performance. In this study (1) the Clear Fork cycle stratigraphy is defined, (2) important scales of petrophysical variability are confirmed, (3) a unique rock-fabric, petrophysical relationship is defined, (4) a porosity method for correlating high-frequency cycles and defining rock-fabric flow layers

  18. 78 FR 48292 - Amendment of Class D Airspace; Grand Forks AFB, ND

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-08

    ... Federal Aviation Administration 14 CFR Part 71 Amendment of Class D Airspace; Grand Forks AFB, ND AGENCY: Federal Aviation Administration (FAA), DOT. ACTION: Final rule. SUMMARY: This action amends Class D... Federal Register a notice of proposed rulemaking (NPRM) to amend Class D airspace for Grand Forks AFB,...

  19. HLTF's Ancient HIRAN Domain Binds 3' DNA Ends to Drive Replication Fork Reversal.

    PubMed

    Kile, Andrew C; Chavez, Diana A; Bacal, Julien; Eldirany, Sherif; Korzhnev, Dmitry M; Bezsonova, Irina; Eichman, Brandt F; Cimprich, Karlene A

    2015-06-18

    Stalled replication forks are a critical problem for the cell because they can lead to complex genome rearrangements that underlie cell death and disease. Processes such as DNA damage tolerance and replication fork reversal protect stalled forks from these events. A central mediator of these DNA damage responses in humans is the Rad5-related DNA translocase, HLTF. Here, we present biochemical and structural evidence that the HIRAN domain, an ancient and conserved domain found in HLTF and other DNA processing proteins, is a modified oligonucleotide/oligosaccharide (OB) fold that binds to 3' ssDNA ends. We demonstrate that the HIRAN domain promotes HLTF-dependent fork reversal in vitro through its interaction with 3' ssDNA ends found at forks. Finally, we show that HLTF restrains replication fork progression in cells in a HIRAN-dependent manner. These findings establish a mechanism of HLTF-mediated fork reversal and provide insight into the requirement for distinct fork remodeling activities in the cell.

  20. 76 FR 35909 - Temporary Concession Contract for Big South Fork National Recreation Area, TN/KY

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-20

    ... National Recreation Area, TN/KY. SUMMARY: Pursuant to 36 CFR 51.24, public notice is hereby given that the...] Temporary Concession Contract for Big South Fork National Recreation Area, TN/KY AGENCY: National Park... visitor services within Big South Fork National Recreation Area, Tennessee and Kentucky, for a term not...

  1. 33 CFR 208.26 - Altus Dam and Reservoir, North Fork Red River, Okla.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Fork Red River, Okla. 208.26 Section 208.26 Navigation and Navigable Waters CORPS OF ENGINEERS..., North Fork Red River, Okla. The Bureau of Reclamation, or its designated agent, shall operate the Altus... of runoff from the area above the dam exceeds the volume of water necessary to raise the...

  2. 33 CFR 208.26 - Altus Dam and Reservoir, North Fork Red River, Okla.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Fork Red River, Okla. 208.26 Section 208.26 Navigation and Navigable Waters CORPS OF ENGINEERS..., North Fork Red River, Okla. The Bureau of Reclamation, or its designated agent, shall operate the Altus... of runoff from the area above the dam exceeds the volume of water necessary to raise the...

  3. First report of anther smut caused by Microbotryum violaceum on forked catchfly in Turkey

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Forked catchfly (Silene dichotoma Ehrh.), family Caryophyllaceae, is a common and native plant in rangelands and pastures in Turkey. It is also an introduced plant that is widely distributed in North America. In May, 2007 about 20 forked catchfly plants on the campus of Ondokuz Mayis University, i...

  4. Origin & Evolution of the Grand Forks Human Nutrition Research Center, 1970-90

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In the early 1960s William E Cornatzer, MD, PhD, suggested the need for increased USDA research concerning human nutrition, and creation of the Grand Forks Human Nutrition Laboratory (Grand Forks Human Nutrition Research Center). He shared ideas with Senator Milton R. Young of North Dakota, who requ...

  5. Active Control of Repetitive Structural Transitions between Replication Forks and Holliday Junctions by Werner Syndrome Helicase

    PubMed Central

    Shin, Soochul; Lee, Jinwoo; Yoo, Sangwoon; Kulikowicz, Tomasz; Bohr, Vilhelm A.; Ahn, Byungchan; Hohng, Sungchul

    2016-01-01

    SUMMARY The reactivation of stalled DNA replication via fork regression invokes Holliday junction formation, branch migration, and the recovery of the replication fork after DNA repair or error-free DNA synthesis. The coordination mechanism for these DNA structural transitions by molecular motors, however, remains unclear. Here we perform single-molecule fluorescence experiments with Werner syndrome protein (WRN) and model replication forks. The Holliday junction is readily formed once the lagging arm is unwound, and migrated unidirectionally with 3.2 ± 0.03 bases/s velocity. The recovery of the replication fork was controlled by branch migration reversal of WRN, resulting in repetitive fork regression. The Holliday junction formation, branch migration, and migration direction reversal are all ATP dependent, revealing that WRN uses the energy of ATP hydrolysis to actively coordinate the structural transitions of DNA. PMID:27427477

  6. 77 FR 64125 - Notice of Proposed Withdrawal Extension and Notification of a Public Meeting for the East Fork...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-18

    ... for the East Fork Elk Winter Range; WY AGENCY: Bureau of Land Management, Interior. ACTION: Notice... States mining laws, to protect the East Fork Elk Winter Range and elk natural feeding grounds in Fremont... mineral estate from location or entry under the United States mining laws, to protect the East Fork...

  7. 59 FR- Prohibited Acts in West Little and North Fork Owyhee National Wild and Scenic River Area

    Federal Register 2010, 2011, 2012, 2013, 2014

    1994-12-15

    ... INTERIOR [OR-030-03-1220-04: GS-043] Prohibited Acts in West Little and North Fork Owyhee National Wild and... and restrictions within the boundaries of the West Little and North Fork Owyhee Rivers as established in the Main, West Little and North Fork Owyhee National Wild and Scenic Rivers Management...

  8. Depositional environments, reservoir trends, and diagenesis of Red Fork sandstones in parts of Blaine, Caddo, and Custer counties, Oklahoma

    SciTech Connect

    Johnson, C.L.

    1984-04-01

    The Red Fork sandstone was divided into the upper and lower Red Fork which are separated by a consistent marker bed. The Red Fork interval thickens markedly across the study area from 250 ft (75 m) in the northeast to over 1300 ft (400 m) in the southwest. Most of the thickening is within the lower Red Fork. The lower Red Fork is believed to have been deposited in shelf-to-basin transitional terrain. Sands were located in delta-front, submarine-channel-fill, and possible submarine-fan terrain. The upper Red Fork is believed to represent the maximum progradation of a deltaic complex. Sandstones of the lower Red Fork are sublithic to lithic arenites; the upper Red Fork is sublithic arenite. The dominant lithic fraction is mudstone fragments. The main diagenetic alterations of both the upper and lower Red Fork sandstones were destruction of primary porosity by compaction and cementation. Dissolution chiefly of mud fragments has produced well-developed secondary porosity. Clays of the lower Red Fork mainly are authigenic chlorite; clays of the upper Red Fork primarily are authigenic kaolinite. Present oil and gas production from Red Fork sandstones is most abundant from localities on the paleoshelf.

  9. CtIP mediates replication fork recovery in a FANCD2-regulated manner.

    PubMed

    Yeo, Jung Eun; Lee, Eu Han; Hendrickson, Eric A; Sobeck, Alexandra

    2014-07-15

    Fanconi anemia (FA) is a chromosome instability syndrome characterized by increased cancer predisposition. Within the FA pathway, an upstream FA core complex mediates monoubiquitination and recruitment of the central FANCD2 protein to sites of stalled replication forks. Once recruited, FANCD2 fulfills a dual role towards replication fork recovery: (i) it cooperates with BRCA2 and RAD51 to protect forks from nucleolytic degradation and (ii) it recruits the BLM helicase to promote replication fork restart while suppressing new origin firing. Intriguingly, FANCD2 and its interaction partners are also involved in homologous recombination (HR) repair of DNA double-strand breaks, hinting that FANCD2 utilizes HR proteins to mediate replication fork recovery. One such candidate is CtIP (CtBP-interacting protein), a key HR repair factor that functions in complex with BRCA1 and MRE11, but has not been investigated as putative player in the replication stress response. Here, we identify CtIP as a novel interaction partner of FANCD2. CtIP binds and stabilizes FANCD2 in a DNA damage- and FA core complex-independent manner, suggesting that FANCD2 monoubiquitination is dispensable for its interaction with CtIP. Following cellular treatment with a replication inhibitor, aphidicolin, FANCD2 recruits CtIP to transiently stalled, as well as collapsed, replication forks on chromatin. At stalled forks, CtIP cooperates with FANCD2 to promote fork restart and the suppression of new origin firing. Both functions are dependent on BRCA1 that controls the step-wise recruitment of MRE11, FANCD2 and finally CtIP to stalled replication forks, followed by their concerted actions to promote fork recovery.

  10. South Fork Flathead Watershed Westslope Cutthroat Trout Conservation Program, Annual Report 2002.

    SciTech Connect

    Grisak, Grant; Marotz, Brian

    2003-06-01

    In 1999, Montana Fish, Wildlife & Parks (MFWP) began a program aimed at conserving the genetically pure populations of westslope cutthroat trout in the South Fork Flathead River drainage. The objective of this program is to eliminate all of the exotic and hybrid trout that threaten the genetically pure westslope cutthroat populations in the South Fork Flathead. The exotic and hybrid trout populations occur in several headwater lakes and their outflow streams. In 2001 MFWP released a draft environmental assessment, pursuant to the Montana Environmental Policy Act (MEPA), that addressed the use of motorized equipment to deliver personnel and materials to some of these lakes in the Bob Marshall and Great Bear Wildernesses (Grisak 2001). After a 30-day public comment period, MFWP determined that the complexity of issues was too great and warranted a more detailed analysis. These issues included transportation options for personnel, equipment and materials, the use of motorized equipment in wilderness, fish removal methods, fish stocking, and the status and distribution of amphibian populations in the project area. Because the program also involves the U.S. Forest Service (USFS) and Bonneville Power Administration (BPA), the environmental analysis needs to comply with the National Environmental Policy Act (NEPA). In October 2001, pursuant to NEPA, MFWP, along with the USFS and BPA initiated an environmental assessment to address these issues. In June 2002, the three agencies determined that the scope of these issues warranted an Environmental Impact Statement. This specialist report describes the logistical, technical and biological issues associated with this project and provides an analysis of options for fish removal, transportation and fish stocking. It further analyzes issues and concerns associated with amphibian populations and creating new domesticated stocks of westslope cutthroat trout. Finally, this document provides a description of each lake, the best

  11. Quartz tuning fork as a probe of surface oscillations

    NASA Astrophysics Data System (ADS)

    Todoshchenko, I.; Savin, A.; Haataja, M.; Kaikkonen, J.-P.; Hakonen, P. J.

    2017-02-01

    Quartz tuning forks are high-quality mechanical oscillators widely used in low temperature physics as viscometers, thermometers, and pressure sensors. We demonstrate that a fork placed in liquid helium near the surface of solid helium is very sensitive to the oscillations of the solid-liquid interface. We developed a double-resonance read-out technique, which allowed us to detect oscillations of the surface with an accuracy of 1 Å in 10 s. Using this technique, we have investigated crystallization waves in 4He down to 10 mK. In contrast to previous studies of crystallization waves, our measurement scheme has very low dissipation, on the order of 20 pW, which allows us to carry out experiments even at sub-mK temperatures. We propose to use this scheme in the search for crystallization waves in 3He, which exist only at temperatures well below 0.5 mK. The suggested technique can also be used for accurate displacement detection in a large variety of systems.

  12. Environment of deposition of Clear Fork Formation: Yoakum County, Texas

    SciTech Connect

    Moore, B.K.

    1987-05-01

    The Clear Fork Formation is Permian (Leonardian) in age and constitutes a major oil-bearing unit in the Permian basin of west Texas. In Yoakum County, west Texas, the upper Clear Fork carbonates record a subtidal upward-shoaling sequence of deposition. A small bryozoan-algal patch reef is situated within these carbonates near the southern edge of the North Basin platform. The reef is completely dolomitized, but paramorphic replacement has facilitated a study of the paleoecology, lateral variations, and community succession within this buildup. Build-ups of this type are scarcely known in strata of Permian age. The reef was apparently founded on a coquina horizon at the base of the buildup. The reef apparently had a low-relief, dome-shaped morphology. The trapping and binding of sediment by bryozoa appear to have been the main constructional process. A significant role was also played by encrusting forams and the early precipitation of submarine cements, both of which added rigidity to the structure. The reef also contains a low-diversity community of other invertebrates. Algal constituents predominate at the basinward edge of the buildup. The reef was formed entirely subaqueously on a broad, relatively shallow tropical marine carbonate shelf environment. An understanding of the lithofacies distribution and paragenesis within this sequence will provide information on porosity variations and the nature and distribution of permeability barriers. Such information is useful in reservoir modeling studies and for secondary recovery techniques in shelf-edge carbonate reservoirs of this type.

  13. Forked grating coupler optical vortex beam interface for silicon photonics

    NASA Astrophysics Data System (ADS)

    Nadovich, Christopher T.; Kosciolek, Derek J.; Jemison, William D.; Crouse, David T.

    2016-09-01

    The forked grating coupler (FGC) is a novel low-profile device compatible with silicon photonics that is capable of sensitive detection or efficient radiation of Optical Vortex (OV) light beams conveying orbital optical angular momentum (OAM). The FGC device combines the idea of a Bragg coupler with the forked hologram to create an integrated optics device that can selectively and efficiently couple selected optical vortex modes at near-normal incidence into planar confined dielectric waveguide modes of a photonic IC. FGCs retain many of the advantages of Bragg couplers, including convenience of placement and fabrication, reasonable bandwidth, small size, and CMOS process compatibility. In this work, prototype designs of FGC structures for 1550 nm wavelength have been developed for implementation on silicon on insulator (SOI) substrate. Fully vectorial three-dimensional (3D) electromagnetic simulation has allowed performance to be optimized over a range of structural parameters. Results have been evaluated against optical performance metrics including overall efficiency, mode match efficiency, and crosstalk between OV modes. Candidate FGC devices have been fabricated on SOI with e-beam lithography and tested optically. Tolerance to etch depth error has been evaluated.

  14. Replication Fork Stability Confers Chemoresistance in BRCA-deficient Cells

    PubMed Central

    Chaudhuri, Arnab Ray; Callen, Elsa; Ding, Xia; Gogola, Ewa; Duarte, Alexandra A.; Lee, Ji-Eun; Wong, Nancy; Lafarga, Vanessa; Calvo, Jennifer A.; Panzarino, Nicholas J.; John, Sam; Day, Amanda; Crespo, Anna Vidal; Shen, Binghui; Starnes, Linda M.; de Ruiter, Julian R.; Daniel, Jeremy A.; Konstantinopoulos, Panagiotis A.; Cortez, David; Cantor, Sharon B.; Fernandez-Capetillo, Oscar; Ge, Kai; Jonkers, Jos; Rottenberg, Sven; Sharan, Shyam K.; Nussenzweig, André

    2016-01-01

    Brca1- and Brca2-deficient cells have reduced capacity to repair DNA double-strand breaks (DSBs) by homologous recombination (HR) and consequently are hypersensitive to DNA damaging agents, including cisplatin and poly(ADP-ribose) polymerase (PARP) inhibitors. Here we show that loss of the MLL3/4 complex protein, PTIP, protects Brca1/2-deficient cells from DNA damage and rescues the lethality of Brca2-deficient embryonic stem cells. However, PTIP deficiency does not restore HR activity at DSBs. Instead, its absence inhibits the recruitment of the MRE11 nuclease to stalled replication forks, which in turn protects nascent DNA strands from extensive degradation. More generally, acquisition of PARPi and cisplatin resistance is associated with replication fork (RF) protection in Brca2-deficient tumor cells that do not develop Brca2 reversion mutations. Disruption of multiple proteins, including PARP1 and CHD4, leads to the same end point of RF protection, highlighting the complexities by which tumor cells evade chemotherapeutic interventions and acquire drug resistance. PMID:27443740

  15. Supplement Analysis for the Watershed Management Program EIS (DOE/EIS-0265/SA-109) - East Fork Holistic Restoration – Salmon River East Fork (SEF) 12 and Herd Creek (HC) 1

    SciTech Connect

    Stewart, Shannon C.

    2003-07-22

    The Bonneville Power Administration (BPA) is proposing to fund activities that will improve fish passage at Salmon River East Fork diversion 12 and at Herd Creek diversion 1. These projects represent cooperative efforts between the Custer Soil and Water Conservation District, Idaho Department of Fish and Game, and local irrigators. The goal of the SEF 12 project is to improve fish passage and habitat by removing the existing SEF 12 pushup gravel diversion, replacing it with a permanent rock weir structure, and installing an impervious membrane and geotextile liner in the wing diversion parallel to the stream bank. The work on the diversion structure at HC 1 will be confined to the existing headgate, wasteway and plunge pool immediately below the structure. The wasteway and plunge pool are part of the system that provides fish passage around the existing diversion structure. The new structure will include improved stop logs and a reconstructed plunge pool, which will enhance fish passage at the diversion.

  16. Grand Forks - East Grand Forks Urban Water Resources Study. Plan Formulation Appendix.

    DTIC Science & Technology

    1981-07-01

    South city limits to Almonte Avenue. This reach includes the Belmont Coulee and Belmont Road areas from the southern city limits to near the upstream...end of the Lincoln Park levee/floodwall project. Reach 2 - Almonte Avenue to Seventh Avenue South extended. This reach covers the Lincoln Park levee

  17. Oxbow Conservation Area; Middle Fork John Day River, Annual Report 2003-2004.

    SciTech Connect

    Cochran, Brian

    2004-02-01

    In early 2001, the Confederated Tribes of Warm Springs, through their John Day Basin Office, concluded the acquisition of the Oxbow Ranch, now know as the Oxbow Conservation Area (OCA). Under a memorandum of agreement with the Bonneville Power Administration (BPA), the Tribes are required to provided BPA an 'annual written report generally describing the real property interests in the Project, HEP analyses undertaken or in progress, and management activities undertaken or in progress'. The project during 2003 was crippled due to the aftermath of the BPA budget crisis. Some objectives were not completed during the first half of this contract because of limited funds in the 2003 fiscal year. The success of this property purchase can be seen on a daily basis. Water rights were utilized only in the early, high water season and only from diversion points with functional fish screens. After July 1, all of the OCA water rights were put instream. Riparian fences on the river, Ruby and Granite Boulder creeks continued to promote important vegetation to provide shade and bank stabilization. Hundreds of willow, dogwood, Douglas-fir, and cottonwood were planted along the Middle Fork John Day River. Livestock grazing on the property was carefully managed to ensure the protection of fish and wildlife habitat, while promoting meadow vigor and producing revenue for property taxes. Monitoring of property populations, resources, and management activities continued in 2003 to build a database for future management of this and other properties in the region.

  18. 78 FR 16490 - Placer County Water Agency; Notice of Authorization for Continued Project Operation

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-03-15

    ... Middle Fork American River and the Rubicon River and located in Placer and El Dorado Counties, almost entirely within the Tahoe and El Dorado National Forests. The license for Project No. 2079 was issued for...

  19. Depositional environments of the Red Fork Sandstone in Custer and Roger Mills Counties, southwestern Oklahoma

    SciTech Connect

    Tolson, P.M. )

    1993-09-01

    The Desmoinesian Red Fork formation is a prolific, overpressured gas-producing sequence of interbedded sandstones and shales. Total thickness ranges from less than 100 ft (northeast) to more than 1100 ft (south). Isopach maps suggest that syndepositional faulting controlled major depositional trends. The lower Red Fork, whose base is defined by a persistent, hot, black shale (sequence boundary ), is mainly deep-marine shale and siltstone. Two major shallowing-upward deltaic sequences separated by a marine transgression are evident in the middle (50-400-ft thick) and upper (30-250-ft thick) Red Fork. The middle Red Fork is marine dominated and was deposited into a relatively deep basin on a steep, unstable delta-front slope. In contrast, the upper Red Fork deltaic sequence is more fluvial dominated and was deposited in shallower water. The upper Red Fork is overlain by the Pink lime interval which appears to be shallow-marine/lagoonal black shale. The Pink lime contains fish scales, coffee-ground to branch-size lignitic plant debris, and brackish to shallow-marine ostracodes, linguloid brachiopods, Tasmanites algae, and gastropods. Most of the Red Fork has an easterly, possibly Ouachita Mountain area source. The prolific Southwest Leedey field has a different mineral assemblage and diagenetic sequence and may have a northern source.

  20. Geomorphic Characterization of the Middle Fork Saline River: Garland, Perry, and Saline Counties, Arkansas

    USGS Publications Warehouse

    Pugh, Aaron L.; Garday, Thomas J.; Redman, Ronald

    2008-01-01

    This report was prepared to help address concerns raised by local residents, State, and Federal agencies about the current geomorphic conditions of the Middle Fork Saline River. Over the past 30 years the Middle Fork Saline River Basin has experienced a marked increase in urbanization. The report summarizes the Middle Fork?s current (2003) channel characteristics at nine stream reaches in the upper 91 square miles of the basin. Assessments at each study reach included comparing measured stream geometry dimensions (cross-sectional area, top width, and mean depth) at bankfull stage to regional hydraulic geometry curves for the Ouachita Mountains Physiographic Province of Arkansas and Oklahoma, evaluations of streambed materials and sinuosity, and classification of individual stream reach types. When compared to the Ouachita Mountains? regional hydraulic geometry curves for natural, stable, stream reaches, five of the nine study reaches had slightly smaller crosssectional areas, longer top widths, and shallower depths. Streambed material analysis indicates that the Middle Fork is a bedrock influenced, gravel dominated stream with lesser amounts of sand and cobbles. Slight increases in sinuosity from 1992 to 2002 at seven of the nine study reaches indicate a slight decrease in stream channel slope. Analyses of the Middle Fork?s hydraulic geometry and sinuosity indicate that the Middle Fork is currently overly wide and shallow, but is slowly adjusting towards a deeper, narrower hydraulic geometry. Using the Rosgen system of channel classification, the two upstream study reaches classified as B4c/1 stream types; which were moderately entrenched, riffle dominated channels, with infrequently spaced pools. The downstream seven study reaches classified as C4/1 stream types; which were slightly entrenched, meandering, gravel-dominated, riffle/ pool channels with well developed flood plains. Analyses of stream reach types suggest that the downstream reaches of the Middle Fork

  1. Effects of Transposable Elements on the Expression of the Forked Gene of Drosophila Melanogaster

    PubMed Central

    Hoover, K. K.; Chien, A. J.; Corces, V. G.

    1993-01-01

    The products of the forked gene are involved in the formation and/or maintenance of a temporary fibrillar structure within the developing bristle rudiment of Drosophila melanogaster. Mutations in the forked locus alter this structure and result in aberrant development of macrochaetae, microchaetae and trichomes. The locus has been characterized at the molecular level by walking, mutant characterization and transcript analysis. Expression of the six forked transcripts is temporally restricted to midlate pupal development. At this time, RNAs of 6.4, 5.6, 5.4, 2.5, 1.9 and 1.1 kilobases (kb) are detected by Northern analysis. The coding region of these RNAs has been found to be within a 21-kb stretch of genomic DNA. The amino terminus of the proteins encoded by the 5.4- and 5.6-kb forked transcripts contain tandem copies of ankyrin-like repeats that may play an important role in the function of forked-encoded products. The profile of forked RNA expression is altered in seven spontaneous mutations characterized during this study. Three forked mutations induced by the insertion of the gypsy retrotransposon contain a copy of this element inserted into an intron of the gene. In these mutants, the 5.6-, 5.4- and 2.5-kb forked mRNAs are truncated via recognition of the polyadenylation site in the 5' long terminal repeat of the gypsy retrotransposon. These results help explain the role of the forked gene in fly development and further our understanding of the role of transposable elements in mutagenesis. PMID:8244011

  2. Finite Element Analysis of Electrically Excited Quartz Tuning Fork Devices

    PubMed Central

    Oria, Roger; Otero, Jorge; González, Laura; Botaya, Luis; Carmona, Manuel; Puig-Vidal, Manel

    2013-01-01

    Quartz Tuning Fork (QTF)-based Scanning Probe Microscopy (SPM) is an important field of research. A suitable model for the QTF is important to obtain quantitative measurements with these devices. Analytical models have the limitation of being based on the double cantilever configuration. In this paper, we present an electromechanical finite element model of the QTF electrically excited with two free prongs. The model goes beyond the state-of-the-art of numerical simulations currently found in the literature for this QTF configuration. We present the first numerical analysis of both the electrical and mechanical behavior of QTF devices. Experimental measurements obtained with 10 units of the same model of QTF validate the finite element model with a good agreement. PMID:23722828

  3. Quartz-enhanced photoacoustic spectroscopy exploiting tuning fork overtone modes

    NASA Astrophysics Data System (ADS)

    Sampaolo, A.; Patimisco, P.; Dong, L.; Geras, A.; Scamarcio, G.; Starecki, T.; Tittel, F. K.; Spagnolo, V.

    2015-12-01

    We report on a quartz-enhanced photoacoustic sensor (QEPAS) based on a custom-made quartz tuning fork (QTF) to operate in both the fundamental and the first overtone vibrational mode resonances. The QTF fundamental mode resonance falls at ˜3 kHz and the first overtone at ˜18 kHz. Electrical tests showed that the first overtone provides a higher quality factor and increased piezoelectric current peak values, with respect to the fundamental flexural mode. To evaluate the QTF acousto-electric energy conversion efficiency, we operated the QEPAS in the near-IR and selected water vapor as the target gas. The first overtone resonance provides a QEPAS signal-to-noise ratio ˜5 times greater with respect to that measured for the fundamental mode. These results open the way to employing QTF overtone vibrational modes for QEPAS based trace gas sensing.

  4. Geochemical map of the North Fork John Day River Roadless Area, Grant County, Oregon

    USGS Publications Warehouse

    Evans, James G.

    1986-01-01

    The North Fork John Day River Roadless Area comprised 21,210 acres in the Umatilla and Wallowa-Whitman National Forests, Grant County, Oregon, about 30 miles northwest of Baker, Oregon. The irregularly shaped area extends for about 1 mile on both sides of a 25-mile segment of the North Fork John Day River from Big Creek on the west to North Fork John Day Campground on the east. Most of the roadless area is in the northern half of the Desolation Butte 15-minute quadrangle. The eastern end of the area is in parts of the Granite and Trout Meadows 7½-minute quadrangles.

  5. To Study the Correlation of Thompson Scoring in Predicting Early Neonatal Outcome in Post Asphyxiated Term Neonates

    PubMed Central

    Sharma, Manisha; Dolker, Stanzin; Kothapalli, Sharada

    2016-01-01

    Introduction Throughout the world each year, an estimated 23% of the 4 million neonatal deaths and 8% of all deaths in <5 years of age are associated with signs of asphyxia at birth. Aim To study the role of cord arterial blood gas analysis at birth and serial Thompson score in predicting the early neonatal outcome in post asphyxiated term neonates. Materials and Methods The study was conducted in Department of Paediatrics, in Neonatal Intensive Care Unit (NICU), Hindu Rao Hospital, New Delhi from May 2014 to February. 2015. This study was a prospective cross-sectional study. During this period, a total of 145 post asphyxiated term neonates born in labour room/obstetric operation theatre were recruited. An informed consent was taken from all the parents. The protocol was approved by the institutional ethical committee. Inclusion criteria were full-term babies with low-Apgar score i.e., 1 min score of ≤ 7 National Neonatal Perinatal Database 2010 (NNPD 2010). Statistical Analysis SPSS 17.0 Software has been used for data analysis. The data were expressed in terms of Means, Standard Deviation and Proportion, followed by comparison between groups through chi-square test or Fisher’s-exact test. A p-value of less than 0.05 was considered as statistically significant. Results The present study was carried out on 145 post asphyxiated full-term babies with low-Apgar score i.e., 1min score of ≤7mild Thompson score on day I,2,3 were 96 (66.2%), 119 (82.06%), 125 (86.20%), moderate Thompson score on day 1,3, 7 were 13 (8.9%), 6 (4.13%), 2 (1.37%) and severe Thompson score on day 1, 3, 7 were 36 (24.8%), 13 (8.96%), 7 (4.82%) respectively. Total 11 patients died out of 145 post asphyxiated full-term babies within 7 days, among 11 patients, 7 died within 3 days. There was clinical improvement among HIE patients as indicated by serial Thompson score done on day 1, 3 and 7. Among 145 patients 62(42.8%) had seizure and 83(57.2%) did not have seizure. Most common type of

  6. Evaluation of Thompson-type trend and monthly weather data models for corn yields in Iowa, Illinois, and Indiana

    NASA Technical Reports Server (NTRS)

    French, V. (Principal Investigator)

    1982-01-01

    An evaluation was made of Thompson-Type models which use trend terms (as a surrogate for technology), meteorological variables based on monthly average temperature, and total precipitation to forecast and estimate corn yields in Iowa, Illinois, and Indiana. Pooled and unpooled Thompson-type models were compared. Neither was found to be consistently superior to the other. Yield reliability indicators show that the models are of limited use for large area yield estimation. The models are objective and consistent with scientific knowledge. Timely yield forecasts and estimates can be made during the growing season by using normals or long range weather forecasts. The models are not costly to operate and are easy to use and understand. The model standard errors of prediction do not provide a useful current measure of modeled yield reliability.

  7. A celebration of mechanics: from nano to macro. The J. Michael T. Thompson Festschrift issue.

    PubMed

    Elishakoff, Isaac

    2013-06-28

    This Theme Issue is dedicated to the topic 'Mechanics: from nano to macro' and marks the 75th birthday of Dr J. Michael T. Thompson, Fellow of the Royal Society, whose current affiliations are as follows: (i) Honorary Fellow, Department of Applied Mathematics and Theoretical Physics, Centre for Mathematical Sciences, University of Cambridge; (ii) Emeritus Professor of Nonlinear Dynamics, Department of Civil, Environmental and Geomatic Engineering, University College London; and (iii) Professor of Theoretical and Applied Dynamics (Distinguished Sixth Century Chair, part-time), University of Aberdeen. He also serves as Chairman of the Board of Directors at ES-Consult (consulting engineers) in Copenhagen, Denmark. The pertinent question that arises from the very start is: should we first salute Michael and then describe the Theme Issue, or vice versa? Indeed, according to Blaise Pascal (1623-1662), the last thing one discovers in composing a work is what to put first. I would like to take the liberty of deviating from the tradition of the Philosophical Transactions and start with the tribute to Michael; after all he is the prime cause of this Theme Issue.

  8. Risk factors for postoperative infections in patients with hip fracture treated by means of Thompson arthroplasty.

    PubMed

    García-Alvarez, F; Al-Ghanem, R; García-Alvarez, I; López-Baisson, A; Bernal, M

    2010-01-01

    Specific conditions associated with surgery may predispose elderly people to septic complications after hip fracture surgery. This study investigated the risk factors predisposing infection in aged patients with subcapital hip fracture. We performed a prospective study of 290 patients with displaced subcapital hip fracture, operated by means of Thompson hip hemi-arthroplasty (83.5% fractures in women). The mean age was 85.42+/-6.06 years (ranging from 69 to 104). Follow-up was realized until death or at least for 2 years. The chi(2) test, analysis of variance, Kruskal-Wallis test, correlation analysis and the Spearman test were applied. Odds ratios (OR) were calculated. During the hospital stay, there were diagnosed 94 urinary tract infections, 25 pneumonias, 50 superficial wound infections, 11 deep wound infections. Transfusions were made in 120 patients (in average: 2.54+/-1.45 units of red cell concentrate/transfused patient). Transfusion appeared to be correlated with superficial wound infection (OR=1.96), urinary infection (OR=1.76) and pneumonia (OR=2.85). Higher number of days waiting for surgery were related significantly with pneumonia (9.8+/-7.44 days vs. 6.39+/-3.75), or urinary tract infection (7.76+/-4.39 days vs. 6.17+/-4.14). We concluded that the transfusion and longer waiting time for surgery have been associated with the septic complications in elderly patients treated surgically for hip fracture.

  9. Digital geologic map of part of the Thompson Falls 1:100,000 quadrangle, Idaho

    USGS Publications Warehouse

    Lewis, Reed S.; Derkey, Pamela D.

    1999-01-01

    The geology of the Thompson Falls 1:100,000 quadrangle, Idaho was compiled by Reed S. Lewis in 1997 onto a 1:100,000-scale greenline mylar of the topographic base map for input into a geographic information system (GIS). The resulting digital geologic map GIS can be queried in many ways to produce a variety of geologic maps. Digital base map data files (topography, roads, towns, rivers and lakes, etc.) are not included: they may be obtained from a variety of commercial and government sources. This database is not meant to be used or displayed at any scale larger than 1:100,000 (e.g., 1:62,500 or 1:24,000). The map area is located in north Idaho. This open-file report describes the geologic map units, the methods used to convert the geologic map data into a digital format, the Arc/Info GIS file structures and relationships, and explains how to download the digital files from the U.S. Geological Survey public access World Wide Web site on the Internet.

  10. Cancer therapy and replication stress: forks on the road to perdition.

    PubMed

    Kotsantis, Panagiotis; Jones, Rebecca M; Higgs, Martin R; Petermann, Eva

    2015-01-01

    Deregulated DNA replication occurs in cancer where it contributes to genomic instability. This process is a target of cytotoxic therapies. Chemotherapies exploit high DNA replication in cancer cells by modifying the DNA template or by inhibiting vital enzymatic activities that lead to slowing or stalling replication fork progression. Stalled replication forks can be converted into toxic DNA double-strand breaks resulting in cell death, i.e., replication stress. While likely crucial for many cancer treatments, replication stress is poorly understood due to its complexity. While we still know relatively little about the role of replication stress in cancer therapy, technical advances in recent years have shed new light on the effect that cancer therapeutics have on replication forks and the molecular mechanisms that lead from obstructed fork progression to cell death. This chapter will give an overview of our current understanding of replication stress in the context of cancer therapy.

  11. The DNA helicase Pfh1 promotes fork merging at replication termination sites to ensure genome stability

    PubMed Central

    Steinacher, Roland; Osman, Fekret; Dalgaard, Jacob Z.; Lorenz, Alexander; Whitby, Matthew C.

    2012-01-01

    Bidirectionally moving DNA replication forks merge at termination sites composed of accidental or programmed DNA–protein barriers. If merging fails, then regions of unreplicated DNA can result in the breakage of DNA during mitosis, which in turn can give rise to genome instability. Despite its importance, little is known about the mechanisms that promote the final stages of fork merging in eukaryotes. Here we show that the Pif1 family DNA helicase Pfh1 plays a dual role in promoting replication fork termination. First, it facilitates replication past DNA–protein barriers, and second, it promotes the merging of replication forks. A failure of these processes in Pfh1-deficient cells results in aberrant chromosome segregation and heightened genome instability. PMID:22426535

  12. Evaluating the effectiveness of floodplain restoration on the North Fork John Day River, Northeast Oregon, USA

    NASA Astrophysics Data System (ADS)

    Clifton, C. F.; Blanton, P.; Long, W.; Walterman, M. T.; McDowell, P. F.; Maus, P.

    2007-12-01

    Over the last decade hundreds of river restoration projects intended to maintain, protect, and restore watersheds, rivers, and habitat for native species in the Pacific Northwest have been implemented. By some counts, investment in watershed restoration exceeds hundreds of millions of dollars annually yet the effectiveness of these efforts remains an elusive question (Roni, 2005). Remote sensing and GIS technologies show great promise for large-scale river monitoring, however most natural resource organizations who implement these projects have limited budget and staff and would benefit from simple, low cost monitoring techniques that use readily available imagery. We used 1:24000 digitized orthorectified resource imagery from 1995, and National Agriculture Imagery Program (NAIP) digital orthophotography from 2005 to assess the effectiveness of floodplain restoration on a 16 km reach of the North Fork John Day River. Between 1993 and 1997 this section was restored by mechanically removing, reshaping, and revegetating cobble-boulder tailings piles left from dredge mining. The project was intended to directly improve floodplain function (i.e. inundation, riparian habitat) and indirectly improve instream habitat (pools, spawning) by reconnecting the active river channel with a reconstructed floodplain surface. Project effectiveness was not well documented initially in terms of quantifying floodplain functional area improvement or channel condition and response at the river-reach scale. Our objectives were to field-verify remote sensing measurements of response variables to test the applicability of available remote sensing imagery for project effectiveness monitoring, and to quantify adjustment in river response variables, using a "before-after" case study approach. Bracketing restoration activities with 1995 and 2000 imagery, we developed and tested methods for acquisition and processing of digital imagery and identified a core set of response variables to sample

  13. Probing Liquid ^4He with Quartz Tuning Forks Using a Novel Multifrequency Lock-in Technique

    NASA Astrophysics Data System (ADS)

    Bradley, D. I.; Haley, R. P.; Kafanov, S.; Noble, M. T.; Pickett, G. R.; Tsepelin, V.; Vonka, J.; Wilcox, T.

    2016-09-01

    We report on a novel technique to measure quartz tuning forks, and possibly other vibrating objects, in a quantum fluid using a multifrequency lock-in amplifier. The multifrequency technique allows to measure the resonance curve of a vibrating object much faster than a conventional single frequency lock-in amplifier technique. Forks with resonance frequencies of 12 kHz and 16 kHz were excited and measured electro-mechanically either at a single frequency or at up to 40 different frequencies simultaneously around the same mechanical mode. The response of each fork was identical for both methods and validates the use of the multifrequency lock-in technique to probe properties of liquid helium at low fork velocities. Using both methods we measured the resonance frequency and drag of two 25-μ m-wide quartz tuning forks immersed in liquid ^4He in the temperature range from 4.2 K to 1.5 K at saturated vapour pressure. The damping and shift of resonance frequency experienced by both tuning forks at low velocities are well described by hydrodynamic contributions in the framework of the two-fluid model. The sensitivity of the 25-μ m-wide tuning forks is larger compared to similar 75-μ m-wide forks and in combination with the faster multifrequency lock-in technique could be used to improve thermometry in liquid ^4He. The multifrequency technique could also be used for studies of the onset of non-linear phenomena such as quantum turbulence and cavitation in superfluids.

  14. Environmental Assessment: Demolish CASS Switch Stations Buildings 644, 645, 646 at Grand Forks Air Force Base

    DTIC Science & Technology

    2006-06-01

    Winters are long and severe with almost continuous snow cover. The spring and fall seasons are generally short transition periods. The average...during the late fall, winter, and spring , and from the southeast during the summer. Grand Forks County is included in the ND Air Quality Control...approximately 10 miles northeast of Grand Forks AFB, the mean discharge of the Turtle River is 50.3 feet cubed per second (ft3/s). Peak flows result from

  15. Environmental Assessment: Construct Airfield Lighting Vault and Demolish Building 531 at Grand Forks Air Force Base

    DTIC Science & Technology

    2007-08-01

    frequent thunderstorms. Winters are long and severe with almost continuous snow cover. The spring and fall seasons are generally short transition periods...from the northwest during the late fall, winter, and spring , and from the southeast during the summer. Grand Forks County is included in the ND Air...Manvel, ND, approximately 10 miles northeast of Grand Forks AFB, the mean discharge of the Turtle River is 50.3 feet cubed per second (ft3/s). Peak

  16. Environmental Assessment: Demolish Buildings 212, 218, 819, 820 at Grand Forks Air Force Base

    DTIC Science & Technology

    2007-01-31

    Winters are long and severe with almost continuous snow cover. The spring and fall seasons are generally short transition periods. The average annual...during the late fall, winter, and spring , and from the southeast during the summer. Grand Forks County is included in the ND Air Quality Control...approximately 10 miles northeast of Grand Forks AFB, the mean discharge of the Turtle River is 50.3 feet cubed per second (ft3/s). Peak flows result from

  17. The Sound Field around a Tuning Fork and the Role of a Resonance Box

    ERIC Educational Resources Information Center

    Bogacz, Bogdan F.; Pedziwiatr, Antoni T.

    2015-01-01

    Atypical two-tine tuning fork is barely audible when held vibrating at an arm's length. It is enough, however, to touch its base to a table or, better, to a resonance box and the emitted sound becomes much louder. An inquiring student may pose questions: (1) Why is a bare tuning fork such a weak emitter of sound? (2) What is the role of the…

  18. DNA2 drives processing and restart of reversed replication forks in human cells

    PubMed Central

    Thangavel, Saravanabhavan; Berti, Matteo; Levikova, Maryna; Pinto, Cosimo; Gomathinayagam, Shivasankari; Vujanovic, Marko; Zellweger, Ralph; Moore, Hayley; Lee, Eu Han; Hendrickson, Eric A.; Cejka, Petr; Stewart, Sheila; Lopes, Massimo

    2015-01-01

    Accurate processing of stalled or damaged DNA replication forks is paramount to genomic integrity and recent work points to replication fork reversal and restart as a central mechanism to ensuring high-fidelity DNA replication. Here, we identify a novel DNA2- and WRN-dependent mechanism of reversed replication fork processing and restart after prolonged genotoxic stress. The human DNA2 nuclease and WRN ATPase activities functionally interact to degrade reversed replication forks with a 5′-to-3′ polarity and promote replication restart, thus preventing aberrant processing of unresolved replication intermediates. Unexpectedly, EXO1, MRE11, and CtIP are not involved in the same mechanism of reversed fork processing, whereas human RECQ1 limits DNA2 activity by preventing extensive nascent strand degradation. RAD51 depletion antagonizes this mechanism, presumably by preventing reversed fork formation. These studies define a new mechanism for maintaining genome integrity tightly controlled by specific nucleolytic activities and central homologous recombination factors. PMID:25733713

  19. Multiple mechanisms contribute to double-strand break repair at rereplication forks in Drosophila follicle cells

    PubMed Central

    Alexander, Jessica L.; Beagan, Kelly; Orr-Weaver, Terry L.; McVey, Mitch

    2016-01-01

    Rereplication generates double-strand breaks (DSBs) at sites of fork collisions and causes genomic damage, including repeat instability and chromosomal aberrations. However, the primary mechanism used to repair rereplication DSBs varies across different experimental systems. In Drosophila follicle cells, developmentally regulated rereplication is used to amplify six genomic regions, two of which contain genes encoding eggshell proteins. We have exploited this system to test the roles of several DSB repair pathways during rereplication, using fork progression as a readout for DSB repair efficiency. Here we show that a null mutation in the microhomology-mediated end-joining (MMEJ) component, polymerase θ/mutagen-sensitive 308 (mus308), exhibits a sporadic thin eggshell phenotype and reduced chorion gene expression. Unlike other thin eggshell mutants, mus308 displays normal origin firing but reduced fork progression at two regions of rereplication. We also find that MMEJ compensates for loss of nonhomologous end joining to repair rereplication DSBs in a site-specific manner. Conversely, we show that fork progression is enhanced in the absence of both Drosophila Rad51 homologs, spindle-A and spindle-B, revealing homologous recombination is active and actually impairs fork movement during follicle cell rereplication. These results demonstrate that several DSB repair pathways are used during rereplication in the follicle cells and their contribution to productive fork progression is influenced by genomic position and repair pathway competition. Furthermore, our findings illustrate that specific rereplication DSB repair pathways can have major effects on cellular physiology, dependent upon genomic context. PMID:27849606

  20. Final report from VFL technologies for the pilot-scale thermal treatment of Lower East Fork Poplar Creek floodplain soils

    SciTech Connect

    1994-09-01

    The Lower East Fork Poplar Creek (LEFPC) extends fourteen (14) miles through Oak Ridge, TN. The Creek sediments and surrounding floodplain soils are contaminated with mercury compounds. This project involved a comprehensive pilot demonstration on thermal desorption of these soils to validate the feasibility of the remedial technology which had been identified in previous studies. Thermal desorption is a technology that utilizes heating or drying of soils to induce volatilization of contaminants. These contaminants are then vaporized and either incinerated or condensed in the second stage of desorption. Mercury (Hg), which was the principal contaminate of concern, was collected by condensers in a vapor collection system. This type of system insured that the toxic mercury vapors did not escape to the atmosphere.

  1. X-15 flight crew - Engle, Rushworth, McKay, Knight, Thompson, and Dana

    NASA Technical Reports Server (NTRS)

    1966-01-01

    The X-15 flight crew, left to right; Air Force Captain Joseph H. Engle, Air Force Major Robert A. Rushworth, NASA pilot John B. 'Jack' McKay, Air Force Major William J. 'Pete' Knight, NASA pilot Milton O. Thompson, and NASA pilot Bill Dana. These six pilots made 125 of the 199 total flights in the X-15. Rushworth made 34 flights (the most of any X-15 pilot); McKay flew 29 times; Engle, Knight, and Dana each flew 16 times; Thompson's total was 14. The X-15 was a rocket-powered aircraft 50 ft long with a wingspan of 22 ft. It was a missile-shaped vehicle with an unusual wedge-shaped vertical tail, thin stubby wings, and unique fairings that extended along the side of the fuselage. The X-15 weighed about 14,000 lb empty and approximately 34,000 lb at launch. The XLR-99 rocket engine, manufactured by Thiokol Chemical Corp., was pilot controlled and was capable of developing 57,000 lb of rated thrust (actual thrust reportedly climbed to 60,000 lb). North American Aviation built three X-15 aircraft for the program. The X-15 research aircraft was developed to provide in-flight information and data on aerodynamics, structures, flight controls, and the physiological aspects of high-speed, high-altitude flight. A follow-on program used the aircraft as a testbed to carry various scientific experiments beyond the Earth's atmosphere on a repeated basis. For flight in the dense air of the usable atmosphere, the X-15 used conventional aerodynamic controls such as rudder surfaces on the vertical stabilizers to control yaw and canted horizontal surfaces on the tail to control pitch when moving in synchronization or roll when moved differentially. For flight in the thin air outside of the appreciable Earth's atmosphere, the X-15 used a reaction control system. Hydrogen peroxide thrust rockets located on the nose of the aircraft provided pitch and yaw control. Those on the wings provided roll control. Because of the large fuel consumption, the X-15 was air launched from a B-52

  2. Synchronism of naupliar development of Sacculina carcini Thompson, 1836 (Pancrustacea, Rhizocephala) revealed by precise monitoring

    NASA Astrophysics Data System (ADS)

    Trédez, Fabien; Rabet, Nicolas; Bellec, Laure; Audebert, Fabienne

    2017-01-01

    Sacculina carcini is member of a highly-specialized group of parasitic cirripeds (Rhizocephala) that use crabs ( Carcinus maenas) as hosts to carry out the reproductive phase of their life cycle. We describe the naupliar development of S. carcini Thompson, 1836 from a very precise monitoring of three different broods from three specimens. Nauplii were sampled every 4 h, from the release of the larvae until the cypris stage. Larval development, from naupliar instar 1 to the cypris stage, lasts 108 h at 18 °C. A rigorous sampling allowed us to describe an additional intermediate naupliar instar, not described previously. Naupliar instars are renumbered from 1 to 5. Nauplius 1 (N1) larvae hatch in the interna; N2 are released from the interna and last between 12 and 16 h; N3 appear between 12 and 16 h after release; N4 appear between 28 and 32 h; and N5 appear between 44 and 48 h. The cypris stage appears between 108 and 112 h. The redescribed morphologies allowed us to identify new characters. Antennular setation discriminates naupliar instars 3, 4 and 5. Telson and furca morphologies discriminate all naupliar instars. Furthermore, we demonstrate that the speed of larval development is similar within a single brood and between broods from different specimens, suggesting synchronization of larval development. From precise monitoring of broods every 4 h, we demonstrate that the life cycle of S. carcini includes five instars of naupliar larvae instead of four. The morphological characters of the larvae discriminate these naupliar instars and allow the identification of S. carcini from other Rhizocephala species. S. carcini larvae develop synchronously. Consequently, they might be an informative model to study larval development in crustaceans.

  3. The Fort Gay, West Virginia School/Community Project: An Assessment.

    ERIC Educational Resources Information Center

    Bertram, Charles L.

    Administered by the 21-member School Community Council (SCC), the Fort Gay-Thompson Urban/Rural project attempts to involve both school personnel and community representatives in the planning of the community's educational program. The project's major goals are to develop and implement comprehensive staff training, and to combine efforts of staff…

  4. Note: Enhanced energy harvesting from low-frequency magnetic fields utilizing magneto-mechano-electric composite tuning-fork.

    PubMed

    Yang, Aichao; Li, Ping; Wen, Yumei; Yang, Chao; Wang, Decai; Zhang, Feng; Zhang, Jiajia

    2015-06-01

    A magnetic-field energy harvester using a low-frequency magneto-mechano-electric (MME) composite tuning-fork is proposed. This MME composite tuning-fork consists of a copper tuning fork with piezoelectric Pb(Zr(1-x)Ti(x))O3 (PZT) plates bonded near its fixed end and with NdFeB magnets attached at its free ends. Due to the resonance coupling between fork prongs, the MME composite tuning-fork owns strong vibration and high Q value. Experimental results show that the proposed magnetic-field energy harvester using the MME composite tuning-fork exhibits approximately 4 times larger maximum output voltage and 7.2 times higher maximum power than the conventional magnetic-field energy harvester using the MME composite cantilever.

  5. Geomorphic Effects of Engineered Log Jams in River Restoration, Middle Fork John Day River

    NASA Astrophysics Data System (ADS)

    Duffin, J.; McDowell, P. F.

    2014-12-01

    The Middle Fork of the John Day River (MFJD) Intensively Monitored Watershed in eastern Oregon is a multi-phase restoration implementation and monitoring project. MFJD is a tributary to the Colombia and is part of one of the longest free flowing rivers systems in the continental United States. It is a gravel and cobble bed river with a drainage area of 2,100 km2. The river has endured extensive channel and floodplain degradation from years of channel alteration and straightening due to human influences including dredge mining, ranching, and farming. As part of the river restoration project on the MFJD, engineered log jams have been constructed to address many of the restoration goals including creating scour pools, inhibiting bank erosion, creating and maintaining a sinuous river planform, and increasing complexity of fish habitat. There is a need for more detailed understanding on ELJ channel morphologic effects and how site-specific characteristics and differences in log jam infrastructure interact to create the in-channel features over timescales longer than a few years. This study uses detailed channel bed topographic surveys collected either with a total station or RTK-GPS technology. Geomorphic change detection techniques are utilized to monitor topographic change under and around the 26 log structures in two different river reaches over a six to seven year period The log structures are often associated with deepening of pools as desired, but also some structures show sedimentation under the structure. Differences in the patterns will be assessed based on the design, location, and specific characteristics of the log structures; variables include number and placement of logs, volume of structure, location on meander bend, and sediment sizes.

  6. Jay L. King, Joseph D. Huxman, and Orion D. Billeter Assist Pilot Milt Thompson into the M2-F2 Attac

    NASA Technical Reports Server (NTRS)

    1966-01-01

    NASA research pilot Milt Thompson is helped into the cockpit of the M2-F2 lifting body research aircraft at NASA's Flight Research Center (now the Dryden Flight Research Center). The M2-F2 is attached to a wing pylon under the wing of NASA's B-52 mothership. The flight was a captive flight with the pilot on-board. Milt Thompson flew in the lifting body throughout the flight, but it was never dropped from the mothership. NASA B-52, Tail Number 008, is an air launch carrier aircraft, 'mothership,' as well as a research aircraft platform that has been used on a variety of research projects. The aircraft, a 'B' model built in 1952 and first flown on June 11, 1955, is the oldest B-52 in flying status and has been used on some of the most significant research projects in aerospace history. Some of the significant projects supported by B-52 008 include the X-15, the lifting bodies, HiMAT (highly maneuverable aircraft technology), Pegasus, validation of parachute systems developed for the space shuttle program (solid-rocket-booster recovery system and the orbiter drag chute system), and the X-38. The B-52 served as the launch vehicle on 106 X-15 flights and flew a total of 159 captive-carry and launch missions in support of that program from June 1959 to October 1968. Information gained from the highly successful X-15 program contributed to the Mercury, Gemini, and Apollo human spaceflight programs as well as space shuttle development. Between 1966 and 1975, the B-52 served as the launch aircraft for 127 of the 144 wingless lifting body flights. In the 1970s and 1980s, the B-52 was the launch aircraft for several aircraft at what is now the Dryden Flight Research Center, Edwards, California, to study spin-stall, high-angle-of attack, and maneuvering characteristics. These included the 3/8-scale F-15/spin research vehicle (SRV), the HiMAT (Highly Maneuverable Aircraft Technology) research vehicle, and the DAST (drones for aerodynamic and structural testing). The aircraft

  7. Mcm10: A Dynamic Scaffold at Eukaryotic Replication Forks

    PubMed Central

    Baxley, Ryan M.; Bielinsky, Anja-Katrin

    2017-01-01

    To complete the duplication of large genomes efficiently, mechanisms have evolved that coordinate DNA unwinding with DNA synthesis and provide quality control measures prior to cell division. Minichromosome maintenance protein 10 (Mcm10) is a conserved component of the eukaryotic replisome that contributes to this process in multiple ways. Mcm10 promotes the initiation of DNA replication through direct interactions with the cell division cycle 45 (Cdc45)-minichromosome maintenance complex proteins 2-7 (Mcm2-7)-go-ichi-ni-san GINS complex proteins, as well as single- and double-stranded DNA. After origin firing, Mcm10 controls replication fork stability to support elongation, primarily facilitating Okazaki fragment synthesis through recruitment of DNA polymerase-α and proliferating cell nuclear antigen. Based on its multivalent properties, Mcm10 serves as an essential scaffold to promote DNA replication and guard against replication stress. Under pathological conditions, Mcm10 is often dysregulated. Genetic amplification and/or overexpression of MCM10 are common in cancer, and can serve as a strong prognostic marker of poor survival. These findings are compatible with a heightened requirement for Mcm10 in transformed cells to overcome limitations for DNA replication dictated by altered cell cycle control. In this review, we highlight advances in our understanding of when, where and how Mcm10 functions within the replisome to protect against barriers that cause incomplete replication. PMID:28218679

  8. Bioavailability of mercury in East Fork Poplar Creek soils

    SciTech Connect

    Barnett, M.O.; Turner, R.R.

    1995-05-01

    The initial risk assessment for the East Fork Poplar Creek (EFPC) floodplain in Oak Ridge, Tennessee, a superfund site heavily contaminated with mercury, was based upon a reference dose for mercuric chloride, a soluble mercury compound not expected to be present in the floodplain, which is frequently saturated with water. Previous investigations had suggested mercury in the EFPC floodplain was less soluble and therefore less bioavailable than mercuric chloride, possibly making the results of the risk assessment unduly conservative. A bioavailability study, designed to measure the amount of mercury available for absorption in a child`s digestive tract, the most critical risk endpoint and pathway, was performed on twenty soils from the EFPC floodplain. The average percentage of mercury released during the study for the twenty soils was 5.3%, compared to 100% of the compound mercuric chloride subjected to the same conditions. Alteration of the procedure to test additional conditions possible during soil digestion did not appreciably alter the results. Therefore, use of a reference dose for mercuric chloride in the EFPC risk assessment without inclusion of a corresponding bioavailability factor may be unduly conservative.

  9. BIOLOGICAL MONITORING PROGRAM FOR EAST FORK POPLAR CREEK

    SciTech Connect

    ADAMS, S.M.; ASHWOOD, T.L.; BEATY, T.W.; BRANDT, C.C.

    1997-10-24

    In May 1985, a National Pollutant Discharge Elimination System (NPDES) permit was issued for the Oak Ridge Y-12 Plant. As a condition of the permit a Biological Monitoring and Abatement Program (BMAP) was developed to demonstrate that the effluent limitations established for the Y- 12 Plant protect the classified uses of the receiving stream (East Fork Poplar Creek; EFPC), in particular, the growth and propagation of aquatic life (Lear et al. 1989). A second objective of the BMAP is to document the ecological effects resulting from the implementation of a water pollution control program designed to eliminate direct discharges of wastewaters to EFPC and to minimize the inadvertent release of pollutants to the environment. Because of the complex nature of the discharges to EFPC and the temporal and spatial variability in the composition of the discharges, a comprehensive, integrated approach to biological monitoring was developed. A new permit was issued to the Y-12 Plant on April 28, 1995 and became effective on July 1, 1995. Biological monitoring continues to be required under the new permit. The BMAP consists of four major tasks that reflect different but complementary approaches to evaluating the effects of the Y-12 Plant discharges on the aquatic integrity of EFPC. These tasks are (1) toxicity monitoring, (2) biological indicator studies, (3) bioaccumulation studies, and (4) ecological surveys of the periphyton, benthic macroinvertebrate, and fish communities.

  10. Biological monitoring program for East Fork Poplar Creek

    SciTech Connect

    Adams, S.M.; Ashwood, T.L.; Beaty, T.W.; Brandt, C.C.; Christensen, S.W.; Cicerone, D.S.; Greeley, M.S. Jr.; Hill, W.R.; Kszos, L.S.

    1997-04-18

    In May 1985, a National Pollutant Discharge Elimination System (NPDES) permit was issued for the Oak Ridge Y-12 Plant. As a condition of the permit, a Biological Monitoring and Abatement Program (BMAP) was developed to demonstrate that the effluent limitations established for the Y-12 Plant protect the classified uses of the receiving stream (East Fork Poplar Creek; EFPC), in particular, the growth and propagation of aquatic life (Lear et al. 1989). A second objective of the BMAP is to document the ecological effects resulting from the implementation of a water pollution control program designed to eliminate direct discharges of wastewaters to EFPC and to minimize the inadvertent release of pollutants to the environment. Because of the complex nature of the discharges to EFPC and the temporal and spatial variability in the composition of the discharges, a comprehensive, integrated approach to biological monitoring was developed. A new permit was issued to the Y-12 Plant on April 28, 1995 and became effective on July 1, 1995. Biological monitoring continues to be required under the new permit. The BMAP consists of four major tasks that reflect different but complementary approaches to evaluating the effects of the Y-12 Plant discharges on the aquatic integrity of EFPC. These tasks are (1) toxicity monitoring, (2) biological indicator studies, (3) bioaccumulation studies, and (4) ecological surveys of the periphyton, benthic macroinvertebrate, and fish communities.

  11. BIOLOGICAL MONITORING PROGRAM FOR EAST FORK POPLAR CREEK

    SciTech Connect

    ADAMS, S.M.; BEATY, T.W.; BRANDT, C.C.; CHRISTENSEN, S.W.; CICERONE, D.S.

    1998-09-09

    In May 1985, a National Pollutant Discharge Elimination System (NPDES) permit was issued for the Oak Ridge Y-12 Plant. As a condition of the permit, a Biological Monitoring and Abatement Program (BMAP) was developed to demonstrate that the effluent limitations established for the Y-12 Plant protect the classified uses of the receiving stream (East Fork Poplar Creek; EFPC), in particular, the growth and propagation of aquatic life (Lear et al. 1989). A second objective of the BMAP is to document the ecological effects resulting from the implementation of a water pollution control program designed to eliminate direct discharges of wastewaters to EFPC and to minimize the inadvertent release of pollutants to the environment. Because of the complex nature of the discharges to EFPC and the temporal and spatial variability in the composition of the discharges, a comprehensive, integrated approach to biological monitoring was developed. A new permit was issued to the Y-12 Plant on April 28, 1995 and became effective on July 1, 1995. Biological monitoring continues to be required under the new permit. The BMAP consists of four major tasks that reflect different but complementary approaches to evaluating the effects of the Y-12 Plant discharges on the aquatic integrity of EFPC. These tasks are (1) toxicity monitoring, (2) biological indicator studies, (3) bioaccumulation studies, and (4) ecological surveys of the periphyton, benthic macroinvertebrate, and fish communities.

  12. CDK1 phosphorylates WRN at collapsed replication forks

    PubMed Central

    Palermo, Valentina; Rinalducci, Sara; Sanchez, Massimo; Grillini, Francesca; Sommers, Joshua A.; Brosh, Robert M.; Zolla, Lello; Franchitto, Annapaola; Pichierri, Pietro

    2016-01-01

    Regulation of end-processing is critical for accurate repair and to switch between homologous recombination (HR) and non-homologous end joining (NHEJ). End resection is a two-stage process but very little is known about regulation of the long-range resection, especially in humans. WRN participates in one of the two alternative long-range resection pathways mediated by DNA2 or EXO1. Here we demonstrate that phosphorylation of WRN by CDK1 is essential to perform DNA2-dependent end resection at replication-related DSBs, promoting HR, replication recovery and chromosome stability. Mechanistically, S1133 phosphorylation of WRN is dispensable for relocalization in foci but is involved in the interaction with the MRE11 complex. Loss of WRN phosphorylation negatively affects MRE11 foci formation and acts in a dominant negative manner to prevent long-range resection altogether, thereby licensing NHEJ at collapsed forks. Collectively, we unveil a CDK1-dependent regulation of the WRN-DNA2-mediated resection and identify an undescribed function of WRN as a DSB repair pathway switch. PMID:27634057

  13. Project IMPACT: A Case Study in Gifted Education.

    ERIC Educational Resources Information Center

    Denton, Drew

    Project IMPACT, a joint effort by public and private schools in Grand Forks (ND) to provide services to gifted elementary students, is described. Four project objectives are identified: to combine educational resources of public and private schools; to provide workshops and resources for teachers; to identify teachers suitable for teaching…

  14. Mercury Contributions from Flint Creek and other Tributaries to the Upper Clark Fork River in Northwestern Montana

    NASA Astrophysics Data System (ADS)

    Langner, H.; Young, M.; Staats, M. F.

    2013-12-01

    Methylmercury contamination in biota is a major factor diminishing the environmental quality of the Upper Clark Fork River (CFR), e.g. by triggering human consumption limits of fish. The CFR is subject to one of the largest Superfund cleanup projects in the US, but remediation and restoration is currently focused exclusively on other mining-related contaminants (As, Cu, Zn, Pb, Cd), which may be counterproductive with respect to the bio-availability of mercury, for example by creation of wetlands along mercury-contaminated reaches of the river. The identification and elimination of Hg sources is an essential step toward reducing the methylmercury exposure in the biota of the CFR watershed because a strong correlation exists between total mercury levels in river sediment and methylmercury levels in aquatic life. We analyzed duplicate samples from the top sediment layer of the main stem and significant tributaries to the Clark Fork River along a 240 km reach between Butte, MT and downstream of the Missoula Valley. Mercury concentrations were 1.3 × 1.6 (mean × SD, n = 35) in the main stem. Concentrations in tributaries varied widely (0.02 to 85 mg/kg) and seemed only loosely related to the number of historic precious metal mines in the watershed. In the upper reach of the CFR, elevated Hg levels are likely caused by residual contaminated sediments in the flood plain. Levels tend to decrease downstream until Drummond, MT, where Flint Creek contributes a significant amount of mercury, causing Hg levels in the main stem CFR to increase from 0.7 to 4 mg/kg. Levels continue to decrease downstream. Flint Creek is the single largest contributor of Hg to the CFR. Detailed sampling of the main stem Flint Creek and tributaries (26 sites) showed extremely high levels in two tributaries (22 to 85 mg/kg) where historic milling operations were located. Elimination of these point sources may be accomplished comparatively economically and may significantly reduce mercury levels in

  15. Sources of alkalinity and acidity along an acid mine drainage remediated stream in SE Ohio: Hewett Fork

    NASA Astrophysics Data System (ADS)

    Schleich, K. L.; Lopez, D. A.; Bowman, J. R.; Kruse, N. A.; Mackey, A. L.; VanDervort, D.; Korenowsky, R.

    2013-12-01

    In the remediation of acid mine drainage impacted streams, it is important to locate and quantify the sources of acidity and alkalinity inputs. These parameters affect the long-term recovery of the stream habitat. Previous studies have focused on treating the remediation of AMD as point source pollution, targeting the main acid seep for remediation. However, in the interest of biological and chemical recovery, it is important to understand how sources of alkalinity and acidity, throughout the stream, affect water and sediment quality. The Hewett Fork watershed in Southeastern Ohio is impacted by AMD from the AS-14 mine complex in Carbondale, Ohio. In attempts to remediate the stream, the water is being treated with a continuous alkaline input from a calcium oxide doser. While the section of watershed furthest downstream from the doser is showing signs of recovery, the water chemistry and aquatic life near the doser are still impacted. The objective of this study is to examine and model the chemistry of the tributaries of Hewett Fork to see how they contribute to the alkalinity and acidity budgets of the main stem of the stream. By examining the inputs of tributaries into the main stem, this project aims to understand processes occurring during remediation throughout the entire stream. Discharge was measured during a dry period in October, 2012 and at a high flow in May, 2013. Field parameters such as pH, TDS, DO, alkalinity and acidity were also determined. Low flow data collected during fall sampling shows variable flow along the stream path, the stream gains water from ground water at some points while it loses water at others, potentially due to variable elevation of the water table. Flow data collected during spring sampling shows that Hewett Fork is a gaining stream during that period with inputs from groundwater contributing to increasing flow downstream. When using this data to calculate the net alkalinity load along the stream, there are areas with alkaline

  16. Historical perspectives on channel pattern in the Clark Fork River, Montana and implications for post-dam removal restoration

    NASA Astrophysics Data System (ADS)

    Woelfle-Erskine, C. A.; Wilcox, A. C.

    2009-12-01

    Active restoration approaches such as channel reconstruction have moved beyond the realm of small streams and are being applied to larger rivers. Uncertainties arising from limited knowledge, fluvial and ecosystem variability, and contaminants are especially significant in restoration of large rivers, where project costs and the social, infrastructural, and ecological costs of failure are high. We use the case of Milltown Dam removal on the Clark Fork River, Montana and subsequent channel reconstruction in the former reservoir to examine the use of historical research and uncertainty analysis in river restoration. At a cost of approximately $120 million, the Milltown Dam removal involves the mechanical removal of approximately 2 million cubic meters of sediments contaminated by upstream mining, followed by restoration of the former reservoir reach in which a single-thread meandering channel is being constructed. Historical maps, surveys, photographs, and accounts suggest a conceptual model of a multi-thread, anastomosing river in the reach targeted for channel reconstruction, upstream of the confluence of the Clark Fork and Blackfoot Rivers. We supplemented historical research with analysis of aerial photographs, topographic data, and USGS stage-discharge measurements in a lotic but reservoir-influenced reach of the Clark Fork River within our study area to estimate avulsion frequency (0.8 avulsions/year over a 70-year period) and average rates of lateral migration and aggradation. These were used to calculate the mobility number, a dimensionless relationship between channel filling and lateral migration timescales that can be used to predict whether a river’s planform is single or multi-threaded. The mobility number within our study reach ranged from 0.6 (multi-thread channel) to 1.7 (transitional channel). We predict that, in the absence of active channel reconstruction, the post-dam channel pattern would evolve to one that alternates between single and multi

  17. Two Dimensional Modeling of the Extent and Stability of Cold Water Refugia at the Confluences of the South Fork of the Eel River

    NASA Astrophysics Data System (ADS)

    Greer, G.; Thompson, S. E.

    2015-12-01

    Like many large rivers draining from forested uplands, the South Fork of the Eel River is characterized by a warm main stem fed by small cold water tributaries along its length. The confluences of the tributaries with the main stem form localized zones of cold water which provide habitat for anadromous fish species such as salmon. These cold water refugia are likely to be increasingly important for fish as temperatures warm and rainfall becomes more erratic due to projected climate change. These sites are protected from drying out over summer (unlike the tributaries, which can fragment if flows become too low), and they are accessible to migrating fish (as tributaries may not be if winter flows are too low to submerge in-channel obstacles). The overall significance of these refugia, however, is controlled by their spatial extent and temporal persistence. The factors that determine the shape, persistence, and stability of these refugia (as a function of varying flow and temperature regimes) remain poorly understood. A combination of scaling arguments and a 2D model is used to estimate the effects of varying flow and thermal regimes on the spatial extent of the cold water zones in the main stem. The stability of the cold water zones is also assessed in light of diurnal flow and temperature variations. The results are compared to in situ temperature data collected at the confluence of the South Fork of the Eel River and Elder Creek, and are used to project the likely significance of tributary confluences for generating cold-water habitat throughout the South Fork of the Eel River.

  18. Horvitz-Thompson survey sample methods for estimating large-scale animal abundance

    USGS Publications Warehouse

    Samuel, M.D.; Garton, E.O.

    1994-01-01

    Large-scale surveys to estimate animal abundance can be useful for monitoring population status and trends, for measuring responses to management or environmental alterations, and for testing ecological hypotheses about abundance. However, large-scale surveys may be expensive and logistically complex. To ensure resources are not wasted on unattainable targets, the goals and uses of each survey should be specified carefully and alternative methods for addressing these objectives always should be considered. During survey design, the impoflance of each survey error component (spatial design, propofiion of detected animals, precision in detection) should be considered carefully to produce a complete statistically based survey. Failure to address these three survey components may produce population estimates that are inaccurate (biased low), have unrealistic precision (too precise) and do not satisfactorily meet the survey objectives. Optimum survey design requires trade-offs in these sources of error relative to the costs of sampling plots and detecting animals on plots, considerations that are specific to the spatial logistics and survey methods. The Horvitz-Thompson estimators provide a comprehensive framework for considering all three survey components during the design and analysis of large-scale wildlife surveys. Problems of spatial and temporal (especially survey to survey) heterogeneity in detection probabilities have received little consideration, but failure to account for heterogeneity produces biased population estimates. The goal of producing unbiased population estimates is in conflict with the increased variation from heterogeneous detection in the population estimate. One solution to this conflict is to use an MSE-based approach to achieve a balance between bias reduction and increased variation. Further research is needed to develop methods that address spatial heterogeneity in detection, evaluate the effects of temporal heterogeneity on survey

  19. Evaluation of the Doraiswamy-Thompson winter wheat crop calendar model incorporating a modified spring restart sequence

    NASA Technical Reports Server (NTRS)

    Taylor, T. W.; Ravet, F. W.; Smika, D. (Principal Investigator)

    1981-01-01

    The Robertson phenology was used to provide growth stage information to a wheat stress indicator mode. A stress indicator model demands two acurate predictions from a crop calendar: date of spring growth initiation; and crop calendar stage at growth initiation. Several approaches for restarting the Robertson phenology model at spring growth initiation were studied. Although best results were obtained with a solar thermal unit method, an alternate approach which indicates soil temperature as the controlling parameter for spring growth initiation was selected and tested. The modified model (Doraiswamy-Thompson) is compared to LACIE-Robertson model predictions.

  20. Quartz tuning-fork oscillations in He II and drag coefficient

    NASA Astrophysics Data System (ADS)

    Gritsenko, I. A.; Zadorozhko, A. A.; Neoneta, A. S.; Chagovets, V. K.; Sheshin, G. A.

    2011-07-01

    The temperature dependencies of drag coefficient for quartz tuning forks of various geometric dimensions, immersed in the He II, were determined experimentally in the temperature range 0.1-3 K. It is identified, that these dependencies are similar, but the values of drag coefficient are different for tuning forks with different geometric dimensions. It is shown, that the obtained specific drag coefficient depends only on the temperature and frequency of vibrations, when the value of drag coefficient is normalized to the surface area of moving tuning-fork prong. The temperature dependencies of normalized drag coefficient for the tuning forks of various dimensions, wire, and microsphere, oscillating in the Не II, are compared. It is shown, that in the ballistic regime of scattering of quasiparticles, these dependencies are identical and have a slope proportional to T4, which is determined by the density of thermal excitations. In the hydrodynamic regime at T > 0.5 K, the behavior of the temperature dependence of specific drag coefficient is affected by the size and frequency of vibrating body. The empirical relation, which allows to describe the behavior of specific drag coefficient for vibrating tuning forks, microsphere, and wire everywhere over the temperature region and at various frequencies, is proposed.

  1. Triplex structures induce DNA double strand breaks via replication fork collapse in NER deficient cells

    PubMed Central

    Kaushik Tiwari, Meetu; Adaku, Nneoma; Peart, Natoya; Rogers, Faye A.

    2016-01-01

    Structural alterations in DNA can serve as natural impediments to replication fork stability and progression, resulting in DNA damage and genomic instability. Naturally occurring polypurine mirror repeat sequences in the human genome can create endogenous triplex structures evoking a robust DNA damage response. Failures to recognize or adequately process these genomic lesions can result in loss of genomic integrity. Nucleotide excision repair (NER) proteins have been found to play a prominent role in the recognition and repair of triplex structures. We demonstrate using triplex-forming oligonucleotides that chromosomal triplexes perturb DNA replication fork progression, eventually resulting in fork collapse and the induction of double strand breaks (DSBs). We find that cells deficient in the NER damage recognition proteins, XPA and XPC, accumulate more DSBs in response to chromosomal triplex formation than NER-proficient cells. Furthermore, we demonstrate that XPC-deficient cells are particularly prone to replication-associated DSBs in the presence of triplexes. In the absence of XPA or XPC, deleterious consequences of triplex-induced genomic instability may be averted by activating apoptosis via dual phosphorylation of the H2AX protein. Our results reveal that damage recognition by XPC and XPA is critical to maintaining replication fork integrity and preventing replication fork collapse in the presence of triplex structures. PMID:27298253

  2. NEK8 regulates DNA damage-induced RAD51 foci formation and replication fork protection

    PubMed Central

    Abeyta, Antonio; Castella, Maria; Jacquemont, Celine; Taniguchi, Toshiyasu

    2017-01-01

    ABSTRACT Proteins essential for homologous recombination play a pivotal role in the repair of DNA double strand breaks, DNA inter-strand crosslinks and replication fork stability. Defects in homologous recombination also play a critical role in the development of cancer and the sensitivity of these cancers to chemotherapy. RAD51, an essential factor for homologous recombination and replication fork protection, accumulates and forms immunocytochemically detectable nuclear foci at sites of DNA damage. To identify kinases that may regulate RAD51 localization to sites of DNA damage, we performed a human kinome siRNA library screen, using DNA damage-induced RAD51 foci formation as readout. We found that NEK8, a NIMA family kinase member, is required for efficient DNA damage-induced RAD51 foci formation. Interestingly, knockout of Nek8 in murine embryonic fibroblasts led to cellular sensitivity to the replication inhibitor, hydroxyurea, and inhibition of the ATR kinase. Furthermore, NEK8 was required for proper replication fork protection following replication stall with hydroxyurea. Loading of RAD51 to chromatin was decreased in NEK8-depleted cells and Nek8-knockout cells. Single-molecule DNA fiber analyses revealed that nascent DNA tracts were degraded in the absence of NEK8 following treatment with hydroxyurea. Consistent with this, Nek8-knockout cells showed increased chromosome breaks following treatment with hydroxyurea. Thus, NEK8 plays a critical role in replication fork stability through its regulation of the DNA repair and replication fork protection protein RAD51. PMID:27892797

  3. Biological Monitoring Program for East Fork Poplar Creek

    SciTech Connect

    Adams, S.M.; Christensen, S.W.; Greeley, M.S.jr; Hill, W.R.; Kszos, L.A.; McCarthy, J.F.; Peterson, M.J.; Ryon, M.G.; Smith, J.G.; Southworth, G.R.; Stewart, A.J.

    1998-10-15

    In May 1985, a National Pollutant Discharge Elimination System (NPDES) permit was issued for the Oak Ridge Y-12 Plant. As a condition of the permit, a Biologicai Monitoring and Abatement Program (BMAP) was developed to demonstrate that the effluent limitations established for the Y-12 Plant protect the classified uses of the receiving stream (East Fork Poplar Creek; EFPC), in particular, the growth and propagation of aquatic life (Lear et al. 1989). A second objective of the BMAP is to document the ecological effects resulting from the implementation of a water pollution control program designed to eliminate direct discharges of wastewaters to EFPC and to minimize the inadvertent release of pollutants to the environment. Because of the compiex nature of the discharges to EFPC and the temporal and spatial variability in the composition of the discharges, a comprehensive, integrated approach to biological monitoring was developed. A new permit was issued to the Y-12 Plant on April 28, 1995 and became effective on July 1, 1995. Biological monitoring continues to be required under the new permit. The BMAP consists of four major tasks that reflect different but complementary approaches to evaluating the effects of the Y-12 Plant discharges on the aquatic integrity of EFPC, These tasks are (1) toxicity monitoring, (2) biological indicator studies, (3) bioaccumuiation studies, and (4) ecological surveys of the periphyton, benthic macro invertebrate, and fish communities. Monitoring is currently being conducted at five sites, although sites maybe excluded and/or others added depending upon the specific objectives of the various tasks. Criteria used in selecting the sites include: (1) location of sampling sites used in other studies, (2) known or suspected sources of downstream impacts, (3) proximity to U.S. Department of Energy (DOE) Oak Ridge Reservation (ORR) boundaries, (4) concentration of mercury in the adjacent floodplain, (5) appropriate habitat distribution, and (6

  4. Linking habitat quality with trophic performance of steelhead along forest gradients in the South Fork Trinity River Watershed, California

    USGS Publications Warehouse

    McCarthy, Sarah G.; Duda, Jeffrey J.; Emlen, John M.; Hodgson, Garth R.; Beauchamp, David A.

    2009-01-01

    We examined invertebrate prey, fish diet, and energy assimilation in relation to habitat variation for steelhead Oncorhynchus mykiss (anadromous rainbow trout) and rainbow trout in nine low-order tributaries of the South Fork Trinity River, northern California. These streams spanned a range of environmental conditions, which allowed us to use bioenergetics modeling to determine the relative effects of forest cover, stream temperature, season, and fish age on food consumption and growth efficiency. Evidence of seasonal shifts in reliance on aquatic versus terrestrial food sources was detected among forest cover categories and fish ages, although these categories were not robust indicators of O. mykiss condition and growth efficiency. Consumption estimates were generally less than 20% of maximum consumption, and fish lost weight in some streams during summer low-flow conditions when stream temperatures exceeded 15°C. Current 100-year climate change projections for California threaten to exacerbate negative growth patterns and may undermine the productivity of this steelhead population, which is currently not listed as endangered or threatened. To demonstrate the potential effect of global warming on fish growth, we ran three climate change scenarios in two representative streams. Simulated temperature increases ranging from 1.4°C to 5.5°C during the summer and from 1.5°C to 2.9C during the winter amplified the weight loss; estimated average growth for age-1 fish was 0.4–4.5 times lower than normal (low to high estimated temperature increase) in the warm stream and 0.05–0.8 times lower in the cool stream. We conclude that feeding rate and temperature during the summer currently limit the growth and productivity of steelhead and rainbow trout in low-order streams in the South Fork Trinity River basin and predict that climate change will have detrimental effects on steelhead growth as well as on macroinvertebrate communities and stream ecosystems in general.

  5. Regional Ecorisk Field investigation, upper Clark Fork River Basin

    SciTech Connect

    Pastorok, R.; LaTier, A.; Ginn, T.

    1995-12-31

    The Regional Ecorisk Field Investigation was conducted at the Clark Fork River Superfund Site (Montana) to evaluate the relationships between plant communities and tailings deposits in riparian habitats and to evaluate food-chain transfer of trace elements to selected wildlife species. Stations were selected to represent a range of vegetation biomass (or cover) values and apparent impact of trace elements, with some areas of lush vegetation, some areas of mostly unvegetated soil (e.g., < 30 percent plant cover), and a gradient in between. For the evaluation of risk to wildlife, bioaccumulation of metals was evaluated in native or naturalized plants, terrestrial invertebrates, and the deer mouse (Peromyscus maniculatus). Potential reproductive effects in the deer mouse were evaluated by direct measurements. For other wildlife species, bioaccumulation data were interpreted in the context of food web exposure models. Total biomass and species richness of riparian plant communities are related to tailings content of soil as indicated by pH and metals concentrations. Risk to populations of omnivorous small mammals such as the deer mouse was not significant. Relative abundance and reproductive condition of the deer mouse were normal, even in areas of high metals enrichment. Based on exposure models and site-specific tissue residue data for dietary species, risk to local populations of predators such as red fox and American kestrel that feed on deer mice and terrestrial invertebrates is not significant. Risk to herbivores related to metals bioaccumulation in plant tissues is not significant. Population level effects in deer and other large wildlife are not expected because of the large home ranges of such species and compensatory demographic factors.

  6. Changes in growth, photosynthetic activities, biochemical parameters and amino acid profile of Thompson Seedless grapes (Vitis vinifera L.).

    PubMed

    Somkuwar, R G; Bahetwar, Anita; Khan, I; Satisha, J; Ramteke, S D; Itroutwar, Prerna; Bhongale, Aarti; Oulkar, Dashrath

    2014-11-01

    The study on photosynthetic activity and biochemical parameters in Thompson Seedless grapes grafted on Dog Ridge rootstock and its impact on growth, yield and amino acid profile at various stages of berry development was conducted during the year 2012-2013. Leaf and berry samples from ten year old vines of Thompson Seedless were collected at different growth and berry developmental stages. The analysis showed difference in photosynthetic activity, biochemical parameters and amino acid status with the changes in berry development stage. Higher photosynthetic rate of 17.39 umol cm(-2) s(-1) was recorded during 3-4mm berry size and the lowest (10.08 umol cm(-2) s(-1)) was recorded during the veraison stage. The photosynthetic activity showed gradual decrease with the onset of harvest while the different biochemical parameters showed increase and decrease from one stage to another in both berry and leaves. Changes in photosynthetic activity and biochemical parameters thereby affected the growth, yield and amino acid content of the berry. Positive correlation of leaf area and photosynthetic rate was recorded during the period of study. Reducing sugar (352.25 mg g(-1)) and total carbohydrate (132.52 mg g(-1)) was more in berries as compared to leaf. Amino acid profile showed variations in different stages of berry development. Marked variations in photosynthetic as well as biochemical and amino acid content at various berry development stages was recorded and thereby its cumulative effect on the development of fruit quality.

  7. Analytical data for reconnaissance geochemical samples from mine dumps, stream sediments and waters at the Thompson Creek Tungsten Mine, Custer County, Idaho

    USGS Publications Warehouse

    Van Gosen, B. S.; Eppinger, R.G.; Hammarstrom, J.M.; Briggs, P.H.; Crock, J.G.; Gent, C.; Meier, A.L.; Sutley, S.J.; Theodorakos, P.M.

    2000-01-01

    The Thompson Creek mine is an inactive and abandoned tungsten mine located along Thompson Creek about 10.5 miles (17 km) northwest of Clayton, Idaho (see location map in file LOCATION.PDF). The mine consisted initially of open pit mining of outcrops and later of underground workings accessed by a single adit. The mine was worked through 1955 and waste piles presently reside in the flood plain above the east bank of Thompson Creek. A view of the collapsed adit is provided in the TIFF (Tagged-Image File Format) file ADIT.TIF (all photographs taken on 08/13/99). A south-facing view of the mine waste dumps is provided in the TIFF file SOUTH.TIF and a north-facing view is provided in NORTH.TIF.

  8. Multiple critical velocities in oscillatory flow of superfluid 4He due to quartz tuning forks

    NASA Astrophysics Data System (ADS)

    Schmoranzer, D.; Jackson, M. J.; Tsepelin, V.; Poole, M.; Woods, A. J.; Človečko, M.; Skrbek, L.

    2016-12-01

    We report recent investigations into the transition to turbulence in superfluid 4He, realized experimentally by measuring the drag forces acting on two custom-made quartz tuning forks with fundamental resonances at 6.5 kHz and 55.5 kHz, in the temperature range 10 mK to 2.17 K. In pure superfluid in the zero temperature limit, three distinct critical velocities were observed with both tuning forks. We discuss the significance of all critical velocities and associate the third critical velocity reported here with the development of large vortical structures in the flow, which thus starts to mimic turbulence in classical fluids. The interpretation of our results is directly linked to previous experimental work with oscillators such as tuning forks, grids, and vibrating wires, focusing on the behavior of purely superfluid 4He at very low temperatures.

  9. Replication Fork Protection Factors Controlling R-Loop Bypass and Suppression

    PubMed Central

    Chang, Emily Yun-Chia; Stirling, Peter C.

    2017-01-01

    Replication–transcription conflicts have been a well-studied source of genome instability for many years and have frequently been linked to defects in RNA processing. However, recent characterization of replication fork-associated proteins has revealed that defects in fork protection can directly or indirectly stabilize R-loop structures in the genome and promote transcription–replication conflicts that lead to genome instability. Defects in essential DNA replication-associated activities like topoisomerase, or the minichromosome maintenance (MCM) helicase complex, as well as fork-associated protection factors like the Fanconi anemia pathway, both appear to mitigate transcription–replication conflicts. Here, we will highlight recent advances that support the concept that normal and robust replisome function itself is a key component of mitigating R-loop coupled genome instability. PMID:28098815

  10. FANCD2 regulates BLM complex functions independently of FANCI to promote replication fork recovery.

    PubMed

    Chaudhury, Indrajit; Sareen, Archana; Raghunandan, Maya; Sobeck, Alexandra

    2013-07-01

    Fanconi Anemia (FA) and Bloom Syndrome share overlapping phenotypes including spontaneous chromosomal abnormalities and increased cancer predisposition. The FA protein pathway comprises an upstream core complex that mediates recruitment of two central players, FANCD2 and FANCI, to sites of stalled replication forks. Successful fork recovery depends on the Bloom's helicase BLM that participates in a larger protein complex ('BLMcx') containing topoisomerase III alpha, RMI1, RMI2 and replication protein A. We show that FANCD2 is an essential regulator of BLMcx functions: it maintains BLM protein stability and is crucial for complete BLMcx assembly; moreover, it recruits BLMcx to replicating chromatin during normal S-phase and mediates phosphorylation of BLMcx members in response to DNA damage. During replication stress, FANCD2 and BLM cooperate to promote restart of stalled replication forks while suppressing firing of new replication origins. In contrast, FANCI is dispensable for FANCD2-dependent BLMcx regulation, demonstrating functional separation of FANCD2 from FANCI.

  11. Maps showing mines, quarries, prospects, and exposures in the Devils Fork Roadless Area, Scott County, Virginia

    USGS Publications Warehouse

    Behum, Paul T.

    1984-01-01

    The Devils Fork Roadless Area is located at the eastern edge of the Appalachian coal region and is within the Cumberland Mountain section of the Appalachian Plateau physiographic province. Most of the area is drained by Devil Fork and its tributaries. Clinch Rock Branch of Straight Creek, Roddy Branch of Valley Creek, and Stinking Creek, all tributary to the Clinch River, drain small fringe tracts. Altitudes range from about 1,550 ft on the lower part of Straight Fork to about 3,490 ft at Cox Place on Little Mountain. Vegetation varies from mixed hardwoods in the uplands to thickets of conifer, rhododendron, and laurel in moist protected areas, as in coves along drainage courses.

  12. Replication Fork Protection Factors Controlling R-Loop Bypass and Suppression.

    PubMed

    Chang, Emily Yun-Chia; Stirling, Peter C

    2017-01-14

    Replication-transcription conflicts have been a well-studied source of genome instability for many years and have frequently been linked to defects in RNA processing. However, recent characterization of replication fork-associated proteins has revealed that defects in fork protection can directly or indirectly stabilize R-loop structures in the genome and promote transcription-replication conflicts that lead to genome instability. Defects in essential DNA replication-associated activities like topoisomerase, or the minichromosome maintenance (MCM) helicase complex, as well as fork-associated protection factors like the Fanconi anemia pathway, both appear to mitigate transcription-replication conflicts. Here, we will highlight recent advances that support the concept that normal and robust replisome function itself is a key component of mitigating R-loop coupled genome instability.

  13. Pathological Changes of von Economo Neuron and Fork Neuron in Neuropsychiatric Diseases.

    PubMed

    Liu, Jia; Wang, Lu-ning; Arzberger, Thomas; Zhu, Ming-wei

    2016-02-01

    von Economo neuron (VEN) is a bipolar neuron characterized by a large spindle-shaped soma. VEN is generally distributed in the layer V of anterior insular lobe and anterior cingulate cortex. Fork neuron is another featured bipolar neuron. In recent years,many studies have illustrated that VEN and fork neurons are correlated with complicated cognition such as self-consciousness and social emotion. Studies in the development and morpholigies of these two neurons as well as their pathological changes in various neurological and psychiatric disorders have found that the abnormal number and functions of VEN can cause corresponding dysfunctions in social recognition and emotions both during the neuro-developmental stages of childhood and during the nerve degeneration in old age stage. Therefore, more attentions should be paid on the research of VEN and fork neurons in neuropsychiatric diseases.

  14. 77 FR 66865 - Record of Decision for the Oil and Gas Management Plan, Big South Fork National River and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-11-07

    ... National Park Service Record of Decision for the Oil and Gas Management Plan, Big South Fork National River... (ROD) for the Oil and Gas Management Plan (Plan) for Big South Fork National River and Recreation Area and Obed Wild and Scenic River. On September 5, 2012, the Southeast Regional Director, approved...

  15. 33 CFR 165.552 - Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey. 165.552 Section 165.552 Navigation and Navigable... Coast Guard District § 165.552 Security Zone; Oyster Creek Generation Station, Forked River,...

  16. 33 CFR 165.552 - Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey. 165.552 Section 165.552 Navigation and Navigable... Coast Guard District § 165.552 Security Zone; Oyster Creek Generation Station, Forked River,...

  17. 33 CFR 165.552 - Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey. 165.552 Section 165.552 Navigation and Navigable... Coast Guard District § 165.552 Security Zone; Oyster Creek Generation Station, Forked River,...

  18. HLTF’s Ancient HIRAN Domain Binds 3′-DNA Ends to Drive Replication Fork Reversal

    PubMed Central

    Kile, Andrew C.; Chavez, Diana A.; Bacal, Julien; Eldirany, Sherif; Korzhnev, Dmitry M.; Bezsonova, Irina; Eichman, Brandt F.; Cimprich, Karlene A.

    2015-01-01

    Summary Stalled replication forks are a critical problem for the cell because they can lead to complex genome rearrangements that underlie cell death and disease. Processes such as DNA damage tolerance and replication fork reversal protect stalled forks from these events. A central mediator of these DNA damage responses in humans is the Rad5-related DNA translocase, HLTF. Here, we present biochemical and structural evidence that the HIRAN domain, an ancient and conserved domain found in HLTF and other DNA processing proteins, is a modified oligonucleotide/oligosaccharide (OB) fold that binds to 3′-ssDNA ends. We demonstrate that the HIRAN domain promotes HLTF-dependent fork reversal in vitro, through its interaction with 3′-ssDNA ends found at forks. Finally, we show that HLTF restrains replication fork progression in cells in a HIRAN-dependent manner. These findings establish a mechanism of HLTF-mediated fork reversal and provide insight into the requirement for distinct fork remodeling activities in the cell. PMID:26051180

  19. Integrating Salmon Recovery, Clean Water Act Compliance, Restoration, and Climate Change Impacts in the South Fork Nooksack River

    EPA Science Inventory

    "The South Fork Nooksack River (SFNR) is an important tributary to the Nooksack River, Bellingham Bay, and the Salish Sea. The South Fork Nooksack River comprises one of the 22 independent populations of spring Chinook in the Puget Sound Chinook Evolutionarily Significant Un...

  20. 33 CFR 165.552 - Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey. 165.552 Section 165.552 Navigation and Navigable... Coast Guard District § 165.552 Security Zone; Oyster Creek Generation Station, Forked River,...

  1. 33 CFR 165.552 - Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Security Zone; Oyster Creek Generation Station, Forked River, Ocean County, New Jersey. 165.552 Section 165.552 Navigation and Navigable... Coast Guard District § 165.552 Security Zone; Oyster Creek Generation Station, Forked River,...

  2. Recombination occurs within minutes of replication blockage by RTS1 producing restarted forks that are prone to collapse

    PubMed Central

    Nguyen, Michael O; Jalan, Manisha; Morrow, Carl A; Osman, Fekret; Whitby, Matthew C

    2015-01-01

    The completion of genome duplication during the cell cycle is threatened by the presence of replication fork barriers (RFBs). Following collision with a RFB, replication proteins can dissociate from the stalled fork (fork collapse) rendering it incapable of further DNA synthesis unless recombination intervenes to restart replication. We use time-lapse microscopy and genetic assays to show that recombination is initiated within ∼10 min of replication fork blockage at a site-specific barrier in fission yeast, leading to a restarted fork within ∼60 min, which is only prevented/curtailed by the arrival of the opposing replication fork. The restarted fork is susceptible to further collapse causing hyper-recombination downstream of the barrier. Surprisingly, in our system fork restart is unnecessary for maintaining cell viability. Seemingly, the risk of failing to complete replication prior to mitosis is sufficient to warrant the induction of recombination even though it can cause deleterious genetic change. DOI: http://dx.doi.org/10.7554/eLife.04539.001 PMID:25806683

  3. X-15 test pilots - Engle, Rushworth, McKay, Knight, Thompson, and Dana

    NASA Technical Reports Server (NTRS)

    1966-01-01

    The X-15 flight crew, left to right; Air Force Captain Joseph H. Engle, Air Force Major Robert A. Rushworth, NASA pilot John B. 'Jack' McKay, Air Force pilot William J. 'Pete' Knight, NASA pilot Milton O. Thompson, and NASA pilot Bill Dana. of their 125 X-15 flights, 8 were above the 50 miles that constituted the Air Force's definition of the beginning of space (Engle 3, Dana 2, Rushworth, Knight, and McKay one each). NASA used the international definition of space as beginning at 62 miles above the earth. The X-15 was a rocket-powered aircraft 50 ft long with a wingspan of 22 ft. It was a missile-shaped vehicle with an unusual wedge-shaped vertical tail, thin stubby wings, and unique fairings that extended along the side of the fuselage. The X-15 weighed about 14,000 lb empty and approximately 34,000 lb at launch. The XLR-99 rocket engine, manufactured by Thiokol Chemical Corp., was pilot controlled and was capable of developing 57,000 lb of rated thrust (actual thrust reportedly climbed to 60,000 lb). North American Aviation built three X-15 aircraft for the program. The X-15 research aircraft was developed to provide in-flight information and data on aerodynamics, structures, flight controls, and the physiological aspects of high-speed, high-altitude flight. A follow-on program used the aircraft as a testbed to carry various scientific experiments beyond the Earth's atmosphere on a repeated basis. For flight in the dense air of the usable atmosphere, the X-15 used conventional aerodynamic controls such as rudder surfaces on the vertical stabilizers to control yaw and canted horizontal surfaces on the tail to control pitch when moving in synchronization or roll when moved differentially. For flight in the thin air outside of the appreciable Earth's atmosphere, the X-15 used a reaction control system. Hydrogen peroxide thrust rockets located on the nose of the aircraft provided pitch and yaw control. Those on the wings provided roll control. Because of the large

  4. Geohydrologic appraisal of water resources of the South Fork, Long Island, New York

    USGS Publications Warehouse

    Nemickas, Bronius; Koszalka, Edward J.

    1982-01-01

    The ground-water resources of the South Fork of Long Island, N.Y., were investigated from April 1974 to September 1977. The study area encompasses 137 square miles and includes the eastern part of the Town of Southampton and the entire Town of East Hampton. The South Fork consists of a Paleozoic basement complex that is overlain by Cretaceous and Pleistocene sediments. The surficial material is composed of Late Wisconsinan glacial and glaciofluvial deposits in association with beach and marsh deposits of Recent age. Till underlies most of the eastern part of the South Fork. Precipitation is the sole source of fresh ground water on the South Fork. Average annual precipitation recorded at Bridgehampton from 1931-76 is 45 inches; about half this amount reaches the ground-water reservoir. It is estimated that overland runoff amounts to 0.5 inches per year, and evapotranspiration is 23 inches per year. Thus, recharge equals approximately 22 inches per year. Hydraulic conductivity and transmissivity of the Magothy (Cretaceous) and upper glacial (Pleistocene) aquifers on the South Fork were estimated from aquifer tests and specific-capacity data. The average horizontal hydraulic conductivity of the Magothy aquifer is 70 feet per day, and of the upper glacial aquifer 350 feet per day. Transmissivity of the Magothy aquifer on the South Fork ranges from 600 to 24,100 feet squared per day; transmissivity of the upper glacial aquifer ranges from 5,400 feet to 22,700 feet squared per day. No potable water is available from the underlying Lloyd aquifer. The position of the freshwater to saline-water interface is depicted in maps. In the southern part of the area, the freshwater reservoir follows the Ghyben-Herzberg principle, but in the northern part, the depth to interface is less than expected owing to a greater degree of anisotropy of the geologic units. Total public-supply pumpage on the South Fork is estimated to be about 3 Mgal/day, (million gallons per day). Public

  5. Regulating telomere length from the inside out: the replication fork model

    PubMed Central

    2016-01-01

    Telomere length is regulated around an equilibrium set point. Telomeres shorten during replication and are lengthened by telomerase. Disruption of the length equilibrium leads to disease; thus, it is important to understand the mechanisms that regulate length at the molecular level. The prevailing protein-counting model for regulating telomerase access to elongate the telomere does not explain accumulating evidence of a role of DNA replication in telomere length regulation. Here I present an alternative model: the replication fork model that can explain how passage of a replication fork and regulation of origin firing affect telomere length. PMID:27401551

  6. The Sound Field Around a Tuning Fork and the Role of a Resonance Box

    NASA Astrophysics Data System (ADS)

    Bogacz, Bogdan F.; Pedziwiatr, Antoni T.

    2015-02-01

    Atypical two-tine tuning fork is barely audible when held vibrating at an arm's length. It is enough, however, to touch its base to a table or, better, to a resonance box and the emitted sound becomes much louder. An inquiring student may pose questions: Why is a bare tuning fork such a weak emitter of sound?What is the role of the resonance box?Where does energy connected with larger intensity of emitted acoustic waves come from?

  7. Endonuclease cleavage of blocked replication forks: An indirect pathway of DNA damage from antitumor drug-topoisomerase complexes

    NASA Astrophysics Data System (ADS)

    Hong, George; Kreuzer, Kenneth N.

    2003-04-01

    The cytotoxicity of several important antitumor drugs depends on formation of the covalent topoisomerase-DNA cleavage complex. However, cellular processes such as DNA replication are necessary to convert the cleavage complex into a cytotoxic lesion, but the molecular mechanism of this conversion and the precise nature of the cytotoxic lesion are unknown. Using a bacteriophage T4 model system, we have previously shown that antitumor drug-induced cleavage complexes block replication forks in vivo. In this report, we show that these blocked forks can be cleaved by T4 endonuclease VII to create overt DNA breaks. The accumulation of blocked forks increased in endonuclease VII-deficient infections, suggesting that endonuclease cleavage contributes to fork processing in vivo. Furthermore, purified endonuclease VII cleaved the blocked forks in vitro close to the branch points. These results suggest that an indirect pathway of branched-DNA cleavage contributes to the cytotoxicity of antitumor drugs that target DNA topoisomerases.

  8. Fluvial sediment in Salem Fork watershed, West Virginia

    USGS Publications Warehouse

    Flint, R.F.

    1972-01-01

    Suspended sediment discharged from the 8.32-square-mile Salem Fork study area in Harrison County, W. Va., averaged 3,500 tons per year during the first 4-year period of investigation and 1,770 tons per year during the second 4-year period. The difference as attributed to increased flow control, effected by the completion of detention structures and other conservation measures, the absence of appreciable sediment-producing construction activities, and a reduction of the amounts of rainfall and runoff during the second 4-year period. Particle-size distribution of the suspended sediment discharged from the watershed remained unchanged during the two 4-year periods. Although sand and some silt were deposited in upstream reservoirs, sands and other sediments were evidently entrained in the flow below the reservoirs. During the 7.75-year period, reservoir 11A had a trap efficiency of 88 percent. The average annual sediment yield of subwatershed 11A was 1.31 tons per acre, or 837 tons per square mile. Outflow from reservoir 11A occurred during 81 percent of the investigation 'period, October 1954 to June 1962, and 78 percent of the sediment discharge from the reservoir occurred during less than 6 percent of the investigation period. A comparison of particle-size distribution of inflow sediment with that of outflow sediment revealed that practically all sands and some silts entering reservoir 11A were deposited in the reservoir. Chemical analyses of inflow water and the particle-size analyses suggested that flocculation of fine sediments occurred in the reservoir. Analysis of the sediment data collected at the outflow of reservoir 9 during 1956-62 revealed that the average annual sediment discharge was 128,000 pounds per year. Limited particle-size data suggested that practically no sand was discharged from reservoir 9, even though the inflow contained sand. Average annual inflow to reservoirs 11A and 9 compared favorably with average annual runoff for the entire watershed

  9. EEPD1 Rescues Stressed Replication Forks and Maintains Genome Stability by Promoting End Resection and Homologous Recombination Repair

    PubMed Central

    Wu, Yuehan; Lee, Suk-Hee; Williamson, Elizabeth A.; Reinert, Brian L.; Cho, Ju Hwan; Xia, Fen; Jaiswal, Aruna Shanker; Srinivasan, Gayathri; Patel, Bhavita; Brantley, Alexis; Zhou, Daohong; Shao, Lijian; Pathak, Rupak; Hauer-Jensen, Martin; Singh, Sudha; Kong, Kimi; Wu, Xaiohua; Kim, Hyun-Suk; Beissbarth, Timothy; Gaedcke, Jochen; Burma, Sandeep; Nickoloff, Jac A.; Hromas, Robert A.

    2015-01-01

    Replication fork stalling and collapse is a major source of genome instability leading to neoplastic transformation or cell death. Such stressed replication forks can be conservatively repaired and restarted using homologous recombination (HR) or non-conservatively repaired using micro-homology mediated end joining (MMEJ). HR repair of stressed forks is initiated by 5’ end resection near the fork junction, which permits 3’ single strand invasion of a homologous template for fork restart. This 5’ end resection also prevents classical non-homologous end-joining (cNHEJ), a competing pathway for DNA double-strand break (DSB) repair. Unopposed NHEJ can cause genome instability during replication stress by abnormally fusing free double strand ends that occur as unstable replication fork repair intermediates. We show here that the previously uncharacterized Exonuclease/Endonuclease/Phosphatase Domain-1 (EEPD1) protein is required for initiating repair and restart of stalled forks. EEPD1 is recruited to stalled forks, enhances 5’ DNA end resection, and promotes restart of stalled forks. Interestingly, EEPD1 directs DSB repair away from cNHEJ, and also away from MMEJ, which requires limited end resection for initiation. EEPD1 is also required for proper ATR and CHK1 phosphorylation, and formation of gamma-H2AX, RAD51 and phospho-RPA32 foci. Consistent with a direct role in stalled replication fork cleavage, EEPD1 is a 5’ overhang nuclease in an obligate complex with the end resection nuclease Exo1 and BLM. EEPD1 depletion causes nuclear and cytogenetic defects, which are made worse by replication stress. Depleting 53BP1, which slows cNHEJ, fully rescues the nuclear and cytogenetic abnormalities seen with EEPD1 depletion. These data demonstrate that genome stability during replication stress is maintained by EEPD1, which initiates HR and inhibits cNHEJ and MMEJ. PMID:26684013

  10. Recent sedimentation and surface-water flow patterns on the flood plain of the North Fork Forked Deer River, Dyer County, Tennessee

    USGS Publications Warehouse

    Wolfe, W.J.; Diehl, T.H.

    1993-01-01

    Sedimentation in the 19th and 20th centuries has had a major effect on surface-water drainage conditions along a 7-mile section of the North, Fork Forked Deer River flood plain, Dyer County, Tenn. During the century prior to 1930, 5 to 12 feet of sediment were deposited over much of the flood plain, resulting in channel obstruction and widespread flooding. The estimated bankfull capacity of the natural channel before it was channelized in 19 16 was comparable to the base flow of the river during the 1980's. Ditching of the river between 191i6 and 1;9,21 was followed by reductions in sedimentation rates over parts of the flood plain. However, the effects of sedimentation have persisted. Occlusions along the natural channel of the river have divided this stream reach into a series of sloughs. These sloughs continue to fill with sediment and are surrounded by ponds that have expanded since 1941. Degradation of the North Fork Forked Deer ditch may eventually reduce ponding over much of the flood plain. Active incision of headcuts in both banks of the ditch is enhancing the drainage of widespread ponded areas. These headcuts likely will have limited effect on drainage of most tributaries. The highest recent sedimentation rates, in places more than 0.2 foot per year, are concentrated near the flood-plain margin along tributary streams. In conjunction with beaver dams and debris, ongoing sedimentation has blocked flow in several tributaries, posing a flood hazard to agricultural land near the flood-plain margin. The occluded tributaries likely will continue to overflow unless they are periodically dredged or their sediment loads are reduced.

  11. Channelization and floodplain forests: Impacts of accelerated sedimentation and valley plug formation on floodplain forests of the Middle Fork Forked Deer River, Tennessee, USA

    USGS Publications Warehouse

    Oswalt, S.N.; King, S.L.

    2005-01-01

    We evaluated the severe degradation of floodplain habitats resulting from channelization and concomitant excessive coarse sedimentation on the Middle Fork Forked Deer River in west Tennessee from 2000 to 2003. Land use practices have resulted in excessive sediment in the tributaries and river system eventually resulting in sand deposition on the floodplain, increased overbank flooding, a rise in the groundwater table, and ponding of upstream timber. Our objectives were to: (1) determine the composition of floodplain vegetation communities along the degraded river reach, (2) to isolate relationships among these communities, geomorphic features, and environmental variables and (3) evaluate successional changes based on current stand conditions. Vegetation communities were not specifically associated with predefined geomorphic features; nevertheless, hydrologic and geomorphic processes as a result of channelization have clearly affected vegetation communities. The presence of valley plugs and continued degradation of upstream reaches and tributaries on the impacted study reach has arrested recovery of floodplain plant communities. Historically common species like Liquidambar styraciflua L. and Quercus spp. L. were not important, with importance values (IV) less than 1, and occurred in less than 20% of forested plots, while Acer rubrum L., a disturbance-tolerant species, was the most important species on the site (IV = 78.1) and occurred in 87% of forested plots. The results of this study also indicate that channelization impacts on the Middle Fork Forked Deer River are more temporally and spatially complex than previously described for other river systems. Rehabilitation of this system necessitates a long-term, landscape-scale solution that addresses watershed rehabilitation in a spatially and temporally hierarchical manner. ?? 2005 Elsevier B.V. All rights reserved.

  12. Carbon Dioxide, Hydrographic, and Chemical Data Obtained During the R/V Thomas G. Thompson Cruise in the Pacific Ocean

    SciTech Connect

    Sabine, C.L.; Key, R.M.; Hall, M.; Kozyr, A.

    1999-08-01

    This data documentation discusses the procedures and methods used to measure total carbon dioxide (TCO2), total alkalinity (TALK), and radiocarbon (delta 14C), at hydrographic stations, as well as the underway partial pressure of CO2 (pCO2) during the R/V Thomas G. Thompson oceanographic cruise in the Pacific Ocean (Section P10). Conducted as part of the World Ocean Circulation Experiment (WOCE), the cruise began in Suva, Fiji, on October 5, 1993, and ended in Yokohama, Japan, on November 10, 1993. Measurements made along WOCE Section P10 included pressure, temperature, salinity [measured by conductivity temperature, and depth sensor (CTD)], bottle salinity, bottle oxygen, phosphate, nitrate, silicate, chlorofluorocarbons (CFC-11, CFC-12), TCO2, TALK, delta 14C, and underway pCO2.

  13. Characteristics of Subcooled Liquid Methane During Passage Through a Spray-Bar Joule-Thompson Thermodynamic Vent System

    NASA Technical Reports Server (NTRS)

    Hastings, L. J.; Bolshinskiy, L. G.; Hedayat, A.; Schnell, A.

    2011-01-01

    NASA s Marshall Space Flight Center (MSFC) conducted liquid methane (LCH4) testing in November 2006 using the multipurpose hydrogen test bed (MHTB) outfitted with a spray-bar thermodynamic vent system (TVS). The basic objective was to identify any unusual or unique thermodynamic characteristics associated with subcooled LCH4 that should be considered in the design of space-based TVSs. Thirteen days of testing were performed with total tank heat loads ranging from 720 W to 420 W at a fill level of approximately 90%. During an updated evaluation of the data, it was noted that as the fluid passed through the Joule Thompson expansion, thermodynamic conditions consistent with the pervasive presence of metastability were indicated. This paper describes the observed thermodynamic conditions that correspond with metastability and effects on TVS performance.

  14. Transgenic plants from shoot apical meristems of Vitis vinifera L. "Thompson Seedless" via Agrobacterium-mediated transformation.

    PubMed

    Dutt, M; Li, Z T; Dhekney, S A; Gray, D J

    2007-12-01

    Shoot apical meristem explants of Vitis vinifera "Thompson Seedless" were used for Agrobacterium-mediated genetic transformation. It was determined that the meristems had to be subjected to a dark growth phase then wounded to obtain transgenic plants. Morphological and histological studies illustrated the role of wounding to expose apical meristem cells for transformation. A bifunctional egfp/nptII fusion gene was used to select kanamycin resistant plants that expressed green fluorescent protein (GFP). Kanamycin at a concentration of 16 mg L(-1) in selection medium resulted in recovery of non-chimeric transgenic plants that uniformly expressed GFP, whereas 8 mg L(-1) kanamycin allowed non-transgenic and/or chimeric plants to develop. Polymerase chain reaction (PCR) and Southern blot analyses confirmed the presence of transgenes and their stable integration into the genome of regenerated plants. Up to 1% of shoot tips produced stable transgenic cultures within 6 weeks of treatment, resulting in a total of 18 independent lines.

  15. Warts and All: Personal Reflections on Social Justice in Counseling Psychology. Reply to Kiselica, Palmer, Thompson and Shermis, and Watts. Rejoinder

    ERIC Educational Resources Information Center

    Goodman, Lisa A.; Liang, Belle; Weintraub, Sarah R.; Helms, Janet E.; Latta, Rachel E.

    2004-01-01

    In their comments regarding Goodman, Liang, Helms, Latta, Sparks, and Weintraub's article "Training Counseling Psychologists as Social Justice Agents: Feminist and Multicultural Principles in Action," Kiselica, Palmer, Thompson and Shermis, and Watts offered a number of useful suggestions for elaborating on social justice theory,…

  16. "It Is Better to Light a Candle than to Curse the Darkness": Ethel Thompson Overby and Democratic Schooling in Richmond, Virginia, 1910-1958

    ERIC Educational Resources Information Center

    Ward Randolph, Adah L.

    2012-01-01

    In 1933, Ethel Thompson Overby became the first African American female principal in Richmond, Virginia. Her motto was "It is better to light a candle than to curse the darkness" (Overby 1975, 1). Before becoming principal, Overby had been a teacher in the southern urban "de jure" segregated schools of the city. How did the…

  17. Numerical performance analysis of quartz tuning fork-based force sensors

    NASA Astrophysics Data System (ADS)

    Dagdeviren, Omur E.; Schwarz, Udo D.

    2017-01-01

    Quartz tuning fork-based force sensors where one prong is immobilized onto a holder while the other one is allowed to oscillate freely (‘qPlus’ configuration) are in widespread use for high-resolution scanning probe microscopy applications. Due to the small size of the tuning forks (≈3 mm) and the complexity of the sensor assemblies, the reliable and repeatable manufacturing of the sensors has been challenging. In this paper, we investigate the contribution of the amount and location of the epoxy glue used to attach the tuning fork to its holder on the sensor’s performance. Towards this end, we use finite element analysis to model the entire sensor assembly and to perform static and dynamic numerical simulations. Our analysis reveals that increasing the thickness of the epoxy layer between prong and holder results in a decrease of the sensor’s spring constant, eigenfrequency, and quality factor while showing an increasing deviation from oscillation in its primary modal shape. Adding epoxy at the sides of the tuning fork also leads to a degradation of the quality factor even though in this case, spring constant and eigenfrequency rise in tandem with a lessening of the deviation from its ideal modal shape.

  18. NUTRIENT CONCENTRATIONS IN FLOWING WATERS OF THE SOUTH FORK BROAD RIVER, GEORGIA WATERSHED

    EPA Science Inventory

    The South Fork Broad River (SFBR) drains about 635 km2 of the Georgia Piedmont. The SFBR watershed is primarily rural and undeveloped although the human population increased by about 25% between 1990 and 2000. Forestry and agriculture are the main land uses. Agriculture consis...

  19. Human HLTF mediates postreplication repair by its HIRAN domain-dependent replication fork remodelling

    PubMed Central

    Achar, Yathish Jagadheesh; Balogh, David; Neculai, Dante; Juhasz, Szilvia; Morocz, Monika; Gali, Himabindu; Dhe-Paganon, Sirano; Venclovas, Česlovas; Haracska, Lajos

    2015-01-01

    Defects in the ability to respond properly to an unrepaired DNA lesion blocking replication promote genomic instability and cancer. Human HLTF, implicated in error-free replication of damaged DNA and tumour suppression, exhibits a HIRAN domain, a RING domain, and a SWI/SNF domain facilitating DNA-binding, PCNA-polyubiquitin-ligase, and dsDNA-translocase activities, respectively. Here, we investigate the mechanism of HLTF action with emphasis on its HIRAN domain. We found that in cells HLTF promotes the filling-in of gaps left opposite damaged DNA during replication, and this postreplication repair function depends on its HIRAN domain. Our biochemical assays show that HIRAN domain mutant HLTF proteins retain their ubiquitin ligase, ATPase and dsDNA translocase activities but are impaired in binding to a model replication fork. These data and our structural study indicate that the HIRAN domain recruits HLTF to a stalled replication fork, and it also provides the direction for the movement of the dsDNA translocase motor domain for fork reversal. In more general terms, we suggest functional similarities between the HIRAN, the OB, the HARP2, and other domains found in certain motor proteins, which may explain why only a subset of DNA translocases can carry out fork reversal. PMID:26350214

  20. NUTRIENT CONCENTRATIONS IN FLOWING WATERS OF THE SOUTH FORK BROAD RIVER, GEORGIA WATERSHED

    EPA Science Inventory

    We monitored concentrations of nutrients, dissolved organic matter (DOM) and other parameters in 17 headwater streams, at three sites on the main stem, and in three major tributaries near their confluence with the South Fork Broad River on a monthly basis for over a year. Concent...

  1. East Fork Watershed Cooperative: Toward better system-scale watershed management

    EPA Science Inventory

    The East Fork Watershed Cooperative is a group intent on understanding how to best manage water quality in a large mixed-use Midwestern watershed system. The system contains a reservoir that serves as a source of drinking water and is popular for water recreation. The reservoir i...

  2. Mammalian RAD52 Functions in Break-Induced Replication Repair of Collapsed DNA Replication Forks.

    PubMed

    Sotiriou, Sotirios K; Kamileri, Irene; Lugli, Natalia; Evangelou, Konstantinos; Da-Ré, Caterina; Huber, Florian; Padayachy, Laura; Tardy, Sebastien; Nicati, Noemie L; Barriot, Samia; Ochs, Fena; Lukas, Claudia; Lukas, Jiri; Gorgoulis, Vassilis G; Scapozza, Leonardo; Halazonetis, Thanos D

    2016-12-15

    Human cancers are characterized by the presence of oncogene-induced DNA replication stress (DRS), making them dependent on repair pathways such as break-induced replication (BIR) for damaged DNA replication forks. To better understand BIR, we performed a targeted siRNA screen for genes whose depletion inhibited G1 to S phase progression when oncogenic cyclin E was overexpressed. RAD52, a gene dispensable for normal development in mice, was among the top hits. In cells in which fork collapse was induced by oncogenes or chemicals, the Rad52 protein localized to DRS foci. Depletion of Rad52 by siRNA or knockout of the gene by CRISPR/Cas9 compromised restart of collapsed forks and led to DNA damage in cells experiencing DRS. Furthermore, in cancer-prone, heterozygous APC mutant mice, homozygous deletion of the Rad52 gene suppressed tumor growth and prolonged lifespan. We therefore propose that mammalian RAD52 facilitates repair of collapsed DNA replication forks in cancer cells.

  3. Inferring Causes of Biological Impairment in the Clear Fork Watershed, West Virginia (Final)

    EPA Science Inventory

    The Clear Fork, WV case study illustrates a causal assessment in a watershed using the USEPA stressor identification process described on www.epa.gov/caddis. This case study demonstrates that a watershed-wide causal assessment has several advantages for making analysis practical,...

  4. 78 FR 74005 - Amendment of Class D and Class E Airspace; Grand Forks, ND

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-12-10

    ... MSL within a 4.2-mile radius of Grand Forks International Airport. This Class D airspace area is... airspace extending upward from the surface to and including 3,400 feet MSL within a 4.9-mile radius of....9-mile radius to 5.6 miles south of the airport, excluding that airspace within the Grand...

  5. A chloroplast DNA helicase II from pea that prefers fork-like replication structures

    PubMed

    Tuteja; Phan

    1998-11-01

    A DNA helicase, called chloroplast DNA (ctDNA) helicase II, was purified to apparent homogeneity from pea (Pisum sativum). The enzyme contained intrinsic, single-stranded, DNA-dependent ATPase activity and an apparent molecular mass of 78 kD on sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The DNA helicase was markedly stimulated by DNA substrates with fork-like replication structures. A 5'-tailed fork was more active than the 3'-tailed fork, which itself was more active than substrates without a fork. The direction of unwinding was 3' to 5' along the bound strand, and it failed to unwind blunt-ended duplex DNA. DNA helicase activity required only ATP or dATP hydrolysis. The enzyme also required a divalent cation (Mg2+>Mn2+>Ca2+) for its unwinding activity and was inhibited at 200 mM KCl or NaCl. This enzyme could be involved in the replication of ctDNA. The DNA major groove-intercalating ligands nogalamycin and daunorubicin were inhibitory to unwinding (Ki approximately 0.85 &mgr;M and 2.2 &mgr;M, respectively) and ATPase (Ki approximately 1.3 &mgr;M and 3.0 &mgr;M, respectively) activities of pea ctDNA helicase II, whereas ellipticine, etoposide (VP-16), and camptothecin had no effect on the enzyme activity. These ligands may be useful in further studies of the mechanisms of chloroplast helicase activities.

  6. Inferring Causes of Biological Impairment in the Clear Fork Watershed, West Virginia (Final)

    EPA Science Inventory

    EPA announced the availability of the final report, Inferring Causes of Biological Impairment in the Clear Fork Watershed, West Virginia. This study illustrates a causal assessment in a watershed using the US EPA stressor identification process described on the www.epa....

  7. Double Moutain Fork Brazos River between Lubbock and Buffalo Lakes, Texas

    USGS Publications Warehouse

    Joerns, J.O.

    1955-01-01

    The purpose of this investigation was to study quantity, quality, and possible sources of the low flow and spring inflow of the Double Mountain Fork of the Brazos River between the Lubbock sewage disposal plant, 3 miles southeast of Lubbock, and a County Road crossing about 15 miles downstream and 4.2 miles northeast of Slaton, Lubbock County (fig. 1).

  8. Human HLTF mediates postreplication repair by its HIRAN domain-dependent replication fork remodelling

    DOE PAGES

    Achar, Yathish Jagadheesh; Balogh, David; Neculai, Dante; ...

    2015-09-08

    Defects in the ability to respond properly to an unrepaired DNA lesion blocking replication promote genomic instability and cancer. Human HLTF, implicated in error-free replication of damaged DNA and tumour suppression, exhibits a HIRAN domain, a RING domain, and a SWI/SNF domain facilitating DNA-binding, PCNA-polyubiquitin-ligase, and dsDNA-translocase activities, respectively. Here, we investigate the mechanism of HLTF action with emphasis on its HIRAN domain. We found that in cells HLTF promotes the filling-in of gaps left opposite damaged DNA during replication, and this postreplication repair function depends on its HIRAN domain. Our biochemical assays show that HIRAN domain mutant HLTF proteinsmore » retain their ubiquitin ligase, ATPase and dsDNA translocase activities but are impaired in binding to a model replication fork. These data and our structural study indicate that the HIRAN domain recruits HLTF to a stalled replication fork, and it also provides the direction for the movement of the dsDNA translocase motor domain for fork reversal. We suggest functional similarities between the HIRAN, the OB, the HARP2, and other domains found in certain motor proteins, which may explain why only a subset of DNA translocases can carry out fork reversal.« less

  9. EFFECTS OF HABITAT DEGRADATION ON BIOLOGICAL ENDPOINTS IN THE SOUTH FORK BROAD RIVER BASIN, GEORGIA

    EPA Science Inventory

    Many of the streams of the lower Piedmont ecoregion in Georgia have been negatively impacted to some degree by habitat degradation due primarily to sedimentation. The South Fork of the Broad River watershed has been designated as sediment impacted under Section 303(d) of the Clea...

  10. LIFE HISTORY MONITORING OF SALMONIDS IN THE WEST FORK SMITH RIVER, UMPQUA BASIN, OREGON

    EPA Science Inventory

    As a life-cycle monitoring basin for the Oregon Salmon Plan, the Oregon Department of Fish and Wildlife has estimated adult returns, distribution and smolt outmigration of coho, chinook and winter steelhead in the West Fork Smith River since 1998. In 2001/2002, the Environmenta...

  11. 16 CFR Figure 1 to Part 1512 - Bicycle Front Fork Cantilever Bending Test Rig

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 16 Commercial Practices 2 2014-01-01 2014-01-01 false Bicycle Front Fork Cantilever Bending Test Rig 1 Figure 1 to Part 1512 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION FEDERAL HAZARDOUS SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Pt. 1512, Fig. 1 Figure 1 to Part 1512—Bicycle...

  12. 16 CFR Figure 1 to Part 1512 - Bicycle Front Fork Cantilever Bending Test Rig

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 16 Commercial Practices 2 2011-01-01 2011-01-01 false Bicycle Front Fork Cantilever Bending Test Rig 1 Figure 1 to Part 1512 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION FEDERAL HAZARDOUS SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Pt. 1512, Fig. 1 Figure 1 to Part 1512—Bicycle...

  13. 16 CFR Figure 1 to Part 1512 - Bicycle Front Fork Cantilever Bending Test Rig

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 16 Commercial Practices 2 2012-01-01 2012-01-01 false Bicycle Front Fork Cantilever Bending Test Rig 1 Figure 1 to Part 1512 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION FEDERAL HAZARDOUS SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Pt. 1512, Fig. 1 Figure 1 to Part 1512—Bicycle...

  14. 16 CFR Figure 1 to Part 1512 - Bicycle Front Fork Cantilever Bending Test Rig

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 16 Commercial Practices 2 2013-01-01 2013-01-01 false Bicycle Front Fork Cantilever Bending Test Rig 1 Figure 1 to Part 1512 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION FEDERAL HAZARDOUS SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Pt. 1512, Fig. 1 Figure 1 to Part 1512—Bicycle...

  15. 16 CFR Figure 1 to Part 1512 - Bicycle Front Fork Cantilever Bending Test Rig

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 16 Commercial Practices 2 2010-01-01 2010-01-01 false Bicycle Front Fork Cantilever Bending Test Rig 1 Figure 1 to Part 1512 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION FEDERAL HAZARDOUS SUBSTANCES ACT REGULATIONS REQUIREMENTS FOR BICYCLES Pt. 1512, Fig. 1 Figure 1 to Part 1512—Bicycle...

  16. Archaeal Hel308 helicase targets replication forks in vivo and in vitro and unwinds lagging strands.

    PubMed

    Guy, Colin P; Bolt, Edward L

    2005-01-01

    Mutations in mammalian and Drosophila Hel308 and PolQ paralogues cause genome instability but their helicase functions are mysterious. By in vivo and in vitro analysis, we show that Hel308 from archaea (Hel308a) may act at stalled replication forks. Introducing hel308a into Escherichia coli dnaE strains that conditionally accumulate stalled forks caused synthetic lethality, an effect indistinguishable from E.coli RecQ. Further analysis in vivo indicated that the effect of hel308a is exerted independently of homologous recombination. The minimal biochemical properties of Hel308a protein were the same as human Hel308. We describe how helicase actions of Hel308a at fork structures lead specifically to displacement of lagging strands. The invading strand of D-loops is also targeted. Using archaeal Hel308, we propose models of action for the helicase domain of PolQ, promoting loading of the translesion polymerase domain. We speculate that removal of lagging strands at stalled forks by Hel308 promotes the formation of initiation zones, priming restart of lagging strand synthesis.

  17. Risks at the DNA Replication Fork: Effects upon Carcinogenesis and Tumor Heterogeneity

    PubMed Central

    Mertz, Tony M.; Harcy, Victoria; Roberts, Steven A.

    2017-01-01

    The ability of all organisms to copy their genetic information via DNA replication is a prerequisite for cell division and a biological imperative of life. In multicellular organisms, however, mutations arising from DNA replication errors in the germline and somatic cells are the basis of genetic diseases and cancer, respectively. Within human tumors, replication errors additionally contribute to mutator phenotypes and tumor heterogeneity, which are major confounding factors for cancer therapeutics. Successful DNA replication involves the coordination of many large-scale, complex cellular processes. In this review, we focus on the roles that defects in enzymes that normally act at the replication fork and dysregulation of enzymes that inappropriately damage single-stranded DNA at the fork play in causing mutations that contribute to carcinogenesis. We focus on tumor data and experimental evidence that error-prone variants of replicative polymerases promote carcinogenesis and on research indicating that the primary target mutated by APOBEC (apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like) cytidine deaminases is ssDNA present at the replication fork. Furthermore, we discuss evidence from model systems that indicate replication stress and other cancer-associated metabolic changes may modulate mutagenic enzymatic activities at the replication fork. PMID:28117753

  18. Human HLTF mediates postreplication repair by its HIRAN domain-dependent replication fork remodelling

    SciTech Connect

    Achar, Yathish Jagadheesh; Balogh, David; Neculai, Dante; Juhasz, Szilvia; Morocz, Monika; Gali, Himabindu; Dhe-Paganon, Sirano; Venclovas, Česlovas; Haracska, Lajos

    2015-09-08

    Defects in the ability to respond properly to an unrepaired DNA lesion blocking replication promote genomic instability and cancer. Human HLTF, implicated in error-free replication of damaged DNA and tumour suppression, exhibits a HIRAN domain, a RING domain, and a SWI/SNF domain facilitating DNA-binding, PCNA-polyubiquitin-ligase, and dsDNA-translocase activities, respectively. Here, we investigate the mechanism of HLTF action with emphasis on its HIRAN domain. We found that in cells HLTF promotes the filling-in of gaps left opposite damaged DNA during replication, and this postreplication repair function depends on its HIRAN domain. Our biochemical assays show that HIRAN domain mutant HLTF proteins retain their ubiquitin ligase, ATPase and dsDNA translocase activities but are impaired in binding to a model replication fork. These data and our structural study indicate that the HIRAN domain recruits HLTF to a stalled replication fork, and it also provides the direction for the movement of the dsDNA translocase motor domain for fork reversal. We suggest functional similarities between the HIRAN, the OB, the HARP2, and other domains found in certain motor proteins, which may explain why only a subset of DNA translocases can carry out fork reversal.

  19. Structure of the replication fork in ultraviolet light-irradiated human cells.

    PubMed Central

    Cordeiro-Stone, M; Schumacher, R I; Meneghini, R

    1979-01-01

    The DNA extracted from xeroderma pigmentosum human fibroblasts previously irradiated with 12.5 J/m2 of UV light and pulse-labeled for 45 min with radioactive and (or) heavy precursors, was used to determine the structural characteristics of the replication fork. Density equilibrium centrifugation experiments showed that a fork moved 6 micrometer in 45 min and bypassed 3 pyrimidine dimers in both strands. The same length was covered in 15-20 min in control cells. The delay in irradiated cells was apparently due to pyrimidine dimers acting as temporary blocks to the fork movement. Evidence for this interpretation comes from kinetics of incorporation of [3H]thymidine into DNA, which show that the time necessary to attain a new stable level of DNA synthesis in irradiated cells is equivalent to that required for the replication fork to cover the interdimer distance in one strand. On the other hand, the action of S1 nuclease on DNA synthesized soon after irradiation gives rise to a bimodal distribution in neutral sucrose gradients, one peak corresponding to 43 X 10(6) daltons and the other to 3 X 10(6) daltons. These two DNA species are generated by the attack of the S1 nuclease on single-stranded regions associated with the replication fork. A possible explanation for these results is given by a model according to which there is a delayed bypass of the dimer in the leading strand and the appearance of gaps opposite pyrimidine dimers in the lagging strand, as a direct consequence of the discontinuous mode of DNA replication. In terms of the model, the DNA of 43 X 10(6) daltons corresponds to the leading strand, linked to the unreplicated branch of the forks, whereas the piece of 3 X 10(6) daltons is the intergap DNA coming from the lagging strand. Pulse and chase experiments reveal that the low molecular weight DNA grows in a pattern that suggests that more than one gap may be formed per replication fork. PMID:233582

  20. Groundwater and climate change: a sensitivity analysis for the Grand Forks aquifer, southern British Columbia, Canada

    NASA Astrophysics Data System (ADS)

    Allen, D. M.; Mackie, D. C.; Wei, M.

    The Grand Forks aquifer, located in south-central British Columbia, Canada was used as a case study area for modeling the sensitivity of an aquifer to changes in recharge and river stage consistent with projected climate-change scenarios for the region. Results suggest that variations in recharge to the aquifer under the different climate-change scenarios, modeled under steady-state conditions, have a much smaller impact on the groundwater system than changes in river-stage elevation of the Kettle and Granby Rivers, which flow through the valley. All simulations showed relatively small changes in the overall configuration of the water table and general direction of groundwater flow. High-recharge and low-recharge simulations resulted in approximately a +0.05 m increase and a -0.025 m decrease, respectively, in water-table elevations throughout the aquifer. Simulated changes in river-stage elevation, to reflect higher-than-peak-flow levels (by 20 and 50%), resulted in average changes in the water-table elevation of 2.72 and 3.45 m, respectively. Simulated changes in river-stage elevation, to reflect lower-than-baseflow levels (by 20 and 50%), resulted in average changes in the water-table elevation of -0.48 and -2.10 m, respectively. Current observed water-table elevations in the valley are consistent with an average river-stage elevation (between current baseflow and peak-flow stages). L'aquifère de Grand Forks, situé en Colombie britannique (Canada), a été utilisé comme zone d'étude pour modéliser la sensibilité d'un aquifère à des modifications de la recharge et du niveau de la rivière, correspondant à des scénarios envisagés de changement climatique dans cette région. Les résultats font apparaître que les variations de recharge de l'aquifère pour différents scénarios de changement climatique, modélisées pour des conditions de régime permanent, ont un impact sur le système aquifère beaucoup plus faible que les changements du niveau des

  1. A one-dimensional, steady-state, dissolved-oxygen model and waste-load assimilation study for West Fork Blue River, Washington County, Indiana

    USGS Publications Warehouse

    Peters, James G.; Wilber, W.G.; Crawford, Charles G.; Girardi, F.P.

    1979-01-01

    A digital computer model calibrated to observe stream conditions was used to evaluate water quality in West Fork Blue River, Washington County, IN. Instream dissolved-oxygen concentration averaged 96.5% of saturation at selected sites on West Fork Blue River during two 24-hour summer surveys. This high dissolved-oxygen concentration reflects small carbonaceous and nitrogenous waste loads; adequate dilution of waste by the stream; and natural reaeration. Nonpoint source waste loads accounted for an average of 53.2% of the total carbonaceous biochemical-oxygen demand and 90.2% of the nitrogenous biochemical-oxygen demand. Waste-load assimilation was studiedfor critical summer and winter low flows. Natural streamflow for these conditions was zero, so no benefit from dilution was provided. The projected stream reaeration capacity was not sufficient to maintain the minimum daily dissolved-oxygen concentration (5 milligrams per liter) in the stream with current waste-discharge restrictions. During winter low flow, ammonia toxicity, rather than dissolved-oxygen concentration, was the limiting water-quality criterion downstream from the Salem wastewater-treatment facility. (USGS)

  2. A one-dimensional, steady-state, dissolved-oxygen model and waste-load assimilation study for South Fork, Wildcat Creek, Clinton County, Indiana

    USGS Publications Warehouse

    Crawford, Charles G.; Wilber, William G.; Peters, James G.

    1979-01-01

    The Indiana State Board of Health is developing a State water-quality management plan that includes establishing limits for wastewater effluents discharged into Indiana streams. A digital model calibrated to conditions in South Fork Wildcat Creek was used to predict alternatives for future waste loadings that would be compatible with Indiana stream water-quality standards defined for two critical hydrologic conditions, summer and winter low flows. Natural streamflow during the 7-day, 10-year low flow is zero, so no benefit from dilution is provided. The Indiana State Board of Health 's projected ammonia-nitrogen concentration for the Frankfort wastewater-treatment facility will violate the instream total ammonia-nitrogen standard of 2.5 mg/l and 4.0 mg/l during summer and winter low flows, respectively. The model indicates that nitrification and algal respiration were significant factors affecting the dissolved-oxygen dynamics of South Fork Wildcat Creek during two water-quality surveys. Stream water quality during the two water-quality surveys was degraded by the discharge of wastewater receiving only primary treatment. Benthic deposits resulting from this wastewater discharge seem to exert a considerable oxygen demand. The discharge of partially treated wastewater should be eliminated when a new wastewater-treatment facility becomes operational in mid-1979. Therefore, benthic-oxygen demand due to benthic deposits should become negligible at that time.

  3. Dissolved-Solids Load in Henrys Fork Upstream from the Confluence with Antelope Wash, Wyoming, Water Years 1970-2009

    USGS Publications Warehouse

    Foster, Katharine; Kenney, Terry A.

    2010-01-01

    Annual dissolved-solids load at the mouth of Henrys Fork was estimated by using data from U.S. Geological Survey streamflow-gaging station 09229500, Henrys Fork near Manila, Utah. The annual dissolved-solids load for water years 1970-2009 ranged from 18,300 tons in 1977 to 123,300 tons in 1983. Annual streamflows for this period ranged from 14,100 acre-feet in 1977 to 197,500 acre-feet in 1983. The 25-percent trimmed mean dissolved-solids load for water years 1970-2009 was 44,300 tons per year at Henrys Fork near Manila, Utah. Previous simulations using a SPAtially Referenced Regression On Watershed attributes (SPARROW) model for dissolved solids specific to water year 1991 conditions in the Upper Colorado River Basin predicted an annual dissolved-solids load of 25,000 tons for the Henrys Fork Basin upstream from Antelope Wash. On the basis of computed dissolved-solids load data from Henrys Fork near Manila, Utah, together with estimated annual dissolved-solids load from Antelope Wash and Peoples Canal, this prediction was adjusted to 37,200 tons. As determined by simulations with the Upper Colorado River Basin SPARROW model, approximately 56 percent (14,000 tons per year) of the dissolved-solids load at Henrys Fork upstream from Antelope Wash is associated with the 21,500 acres of irrigated agricultural lands in the upper Henrys Fork Basin.

  4. Mechanism of chromosomal DNA replication initiation and replication fork stabilization in eukaryotes.

    PubMed

    Wu, LiHong; Liu, Yang; Kong, DaoChun

    2014-05-01

    Chromosomal DNA replication is one of the central biological events occurring inside cells. Due to its large size, the replication of genomic DNA in eukaryotes initiates at hundreds to tens of thousands of sites called DNA origins so that the replication could be completed in a limited time. Further, eukaryotic DNA replication is sophisticatedly regulated, and this regulation guarantees that each origin fires once per S phase and each segment of DNA gets duplication also once per cell cycle. The first step of replication initiation is the assembly of pre-replication complex (pre-RC). Since 1973, four proteins, Cdc6/Cdc18, MCM, ORC and Cdt1, have been extensively studied and proved to be pre-RC components. Recently, a novel pre-RC component called Sap1/Girdin was identified. Sap1/Girdin is required for loading Cdc18/Cdc6 to origins for pre-RC assembly in the fission yeast and human cells, respectively. At the transition of G1 to S phase, pre-RC is activated by the two kinases, cyclindependent kinase (CDK) and Dbf4-dependent kinase (DDK), and subsequently, RPA, primase-polα, PCNA, topoisomerase, Cdc45, polδ, and polɛ are recruited to DNA origins for creating two bi-directional replication forks and initiating DNA replication. As replication forks move along chromatin DNA, they frequently stall due to the presence of a great number of replication barriers on chromatin DNA, such as secondary DNA structures, protein/DNA complexes, DNA lesions, gene transcription. Stalled forks must require checkpoint regulation for their stabilization. Otherwise, stalled forks will collapse, which results in incomplete DNA replication and genomic instability. This short review gives a concise introduction regarding the current understanding of replication initiation and replication fork stabilization.

  5. Evaluation of the Life History of Native Salmonids in the Malheur River Basin; Cooperative Bull Trout/Redband Trout Research Project, 1999-2000 Annual Report.

    SciTech Connect

    Schwabe, Lawrence; Tiley, Mark; Perkins, Raymond R.

    2000-11-01

    The purpose of this study is to document the seasonal distribution of adult/sub-adult bull trout (Salvelinus confluentus) in the Malheur River basin. Due to the decline of bull trout in the Columbia Basin, the United States Fish and Wildlife Service listed bull trout as a threatened species in June 1998. Past land management activities; construction of dams; and fish eradication projects in the North Fork and Middle Fork Malheur River by poisoning have worked in concert to cumulatively impact native species in the Malheur Basin (Bowers et. al. 1993). Survival of the remaining bull trout populations is severely threatened (Buchanan 1997). 1999 Research Objects are: (1) Document the migratory patterns of adult/sub-adult bull trout in the North Fork Malheur River; (2) Determine the seasonal bull trout use of Beulah Reservoir and bull trout entrainment; and (3) Timing and location of bull trout spawning in the North Fork Malheur River basin. The study area includes the Malheur basin from the mouth of the Malheur River located near Ontario, Oregon to the headwaters of the North Fork Malheur River (Map 1). All fish collected and most of the telemetry effort was done on the North Fork Malheur River subbasin (Map 2). Fish collection was conducted on the North Fork Malheur River at the tailwaters of Beulah Reservoir (RK 29), Beulah Reservoir (RK 29-RK 33), and in the North Fork Malheur River at Crane Crossing (RK 69) to the headwaters of the North Fork Malheur. Radio telemetry was done from the mouth of the Malheur River in Ontario, Oregon to the headwaters of the North Fork Malheur. This report will reflect all migration data collected from 3/1/99 to 12/31/99.

  6. Directionality of replication fork movement determined by two-dimensional native-native DNA agarose gel electrophoresis.

    PubMed

    Ivessa, Andreas S

    2013-01-01

    The analysis of replication intermediates by the neutral-neutral two-dimensional agarose gel technique allows determining the chromosomal positions where DNA replication initiates, whether replication forks pause or stall at specific sites, or whether two DNA molecules undergo DNA recombination events. This technique does not, however, immediately tell in which direction replication forks migrate through the DNA region under investigation. Here, we describe the procedure to determine the direction of replication fork progression by carrying out a restriction enzyme digest of DNA imbedded in agarose after the completion of the first dimension of a 2D gel.

  7. Recreational Appendix Report, Elm Fork Flood Control Project, Dallas and Denton Counties, Texas.

    DTIC Science & Technology

    1973-05-01

    to be expanded both upstream and downstream along the meanders of the River extending from California Crossing Road downstream to the Wildflower ...Plan for Wildflower Meadow ........ ....... 62 11 Small Trail Side Museum and Rest Area . . . . ....... 63 12 Large Trail Side Museum...64 13 Plan - Trail Side Museum Area ..... .............. 65 14 Motorcycle Barrier and Control Gate. . . . ......... 67 15 California Crossing

  8. Cultural Resource Investigation of the Dworshak Reservoir Project, North Fork Clearwater River, Northern Idaho.

    DTIC Science & Technology

    1983-01-01

    to Lapwai, the Lapwai group, the Potlatch and Cottonwood creeks group, and the bands from Ahsahka upstream, including the groups at Kamiah and...location of a trade depot for a steamship service which was to connect the railhead of the Clearwater River at Potlatch Creek, with points on the upper...Company, formed in 1900, and the Potlatch Timber Company soon controlled much of the 23 Fig. 6. View of Dent homestead, ca. 1905, compass direction not

  9. 77 FR 55796 - Sand Lick Fork Watershed Restoration Project; Daniel Boone National Forest, KY

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-09-11

    ... of 0.6 miles of Powell County Road 212 to Forest Service maintenance, conversion of 3.1 miles of..., 212A, 2045, 2120 and the section of county road to be transferred to Forest Service maintenance... Forest Plan provides for the maintenance of the physical integrity of aquatic ecosystems,...

  10. Flood-inundation maps for the East Fork White River at Columbus, Indiana

    USGS Publications Warehouse

    Lombard, Pamela J.

    2013-01-01

    Digital flood-inundation maps for a 5.4-mile reach of the East Fork White River at Columbus, Indiana, from where the Flatrock and Driftwood Rivers combine to make up East Fork White River to just upstream of the confluence of Clifty Creek with the East Fork White River, were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Department of Transportation. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation, depict estimates of the areal extent of flooding corresponding to selected water levels (stages) at USGS streamgage 03364000, East Fork White River at Columbus, Indiana. Current conditions at the USGS streamgage may be obtained on the Internet from the USGS National Water Information System (http://waterdata.usgs.gov/in/nwis/uv/?site_no=03364000&agency_cd=USGS&). The National Weather Service (NWS) forecasts flood hydrographs for the East Fork White River at Columbus, Indiana at their Advanced Hydrologic Prediction Service (AHPS) flood warning system Website (http://water.weather.gov/ahps/), that may be used in conjunction with the maps developed in this study to show predicted areas of flood inundation. In this study, flood profiles were computed for the stream reach by means of a one-dimensional step-backwater model. The hydraulic model was calibrated by using the most current stage-discharge relation at USGS streamgage 03364000, East Fork White River at Columbus, Indiana. The calibrated hydraulic model was then used to determine 15 water-surface profiles for flood stages at 1-foot (ft) intervals referenced to the streamgage datum and ranging from bankfull to approximately the highest recorded water level at the streamgage. The simulated water-surface profiles were then combined with a geographic information system digital elevation model (derived from Light Detection and Ranging (LiDAR) data), having a 0.37-ft vertical accuracy and a 1.02 ft

  11. A distinct replication fork protection pathway connects Fanconi anemia tumor suppressors to RAD51-BRCA1/2.

    PubMed

    Schlacher, Katharina; Wu, Hong; Jasin, Maria

    2012-07-10

    Genes mutated in patients with Fanconi anemia (FA) interact with the DNA repair genes BRCA1 and BRCA2/FANCD1 to suppress tumorigenesis, but the molecular functions ascribed to them cannot fully explain all of their cellular roles. Here, we show a repair-independent requirement for FA genes, including FANCD2, and BRCA1 in protecting stalled replication forks from degradation. Fork protection is surprisingly rescued in FANCD2-deficient cells by elevated RAD51 levels or stabilized RAD51 filaments. Moreover, FANCD2-mediated fork protection is epistatic with RAD51 functions, revealing an unanticipated fork protection pathway that connects FA genes to RAD51 and the BRCA1/2 breast cancer suppressors. Collective results imply a unified molecular mechanism for repair-independent functions of FA, RAD51, and BRCA1/2 proteins in preventing genomic instability and suppressing tumorigenesis.

  12. Moonlighting at replication forks - a new life for homologous recombination proteins BRCA1, BRCA2 and RAD51.

    PubMed

    Kolinjivadi, Arun Mouli; Sannino, Vincenzo; de Antoni, Anna; Técher, Hervé; Baldi, Giorgio; Costanzo, Vincenzo

    2017-01-12

    Coordination between DNA replication and DNA repair ensures maintenance of genome integrity, which is lost in cancer cells. Emerging evidence has linked homologous recombination (HR) proteins RAD51, BRCA1 and BRCA2 to the stability of nascent DNA. This function appears to be distinct from double-strand break (DSB) repair and is in part due to the prevention of MRE11-mediated degradation of nascent DNA at stalled forks. The role of RAD51 in fork protection resembles the activity described for its prokaryotic orthologue RecA, which prevents nuclease-mediated degradation of DNA and promotes replication fork restart in cells challenged by DNA-damaging agents. Here, we examine the mechanistic aspects of HR-mediated fork protection, addressing the crosstalk between HR and replication proteins.

  13. Using Caffeine as a Water Quality Indicator in the Ambient Monitoring Program for Third Fork Creek Watershed, Durham, North Carolina

    PubMed Central

    Spence, Porché L

    2015-01-01

    Caffeine has been suggested as a chemical indicator for domestic wastewater in freshwater systems, although it is not included in water quality monitoring programs. The Third Fork Creek watershed in Durham, NC, is highly urbanized, with a history of receiving untreated wastewater from leaking and overflowing sanitary sewers. The poor water quality originating in the Third Fork Creek watershed threatens its intended uses and jeopardizes drinking water, aquatic life, and recreational activities provided by Jordan Lake. Organic waste contaminants have been detected in both Third Fork Creek watershed and Jordan Lake; however, the sampling periods were temporary, resulting in a few samples collected during nonstorm periods. It is recommended that (1) the concentration of caffeine and other organic waste contaminants are determined during storm and nonstorm periods and (2) caffeine is monitored regularly with traditional water quality indicators to evaluate the health of Third Fork Creek watershed. PMID:26157335

  14. Final report for the pilot-scale thermal treatment of Lower East Fork Poplar Creek floodplain soils

    SciTech Connect

    1994-09-01

    IT Corporation (IT) was contracted by Martin Marietta Energy Systems, Inc. (Energy Systems) to perform a pilot-scale demonstration of the effectiveness of thermal desorption as a remedial technology for removing mercury from the Lower East Fork Poplar Creek (LEFPC) floodplain soil. Previous laboratory studies by Energy Systems suggested that this technology could reduce mercury to very low levels. This pilot-scale demonstration study was initiated to verify on an engineering scale the performance of thermal desorption. This report includes the details of the demonstration study, including descriptions of experimental equipment and procedures, test conditions, sampling and analysis, quality assurance (QA), detailed test results, and an engineering assessment of a conceptual full-scale treatment facility. The specific project tasks addressed in this report were performed between October 1993 and June 1994. These tasks include soil receipt, preparation, and characterization; prepilot (bench-scale) desorption tests; front-end materials handling tests; pilot tests; back-end materials handling tests; residuals treatment; and engineering scale-up assessment.

  15. FANCD2-controlled chromatin access of the Fanconi-associated nuclease FAN1 is crucial for the recovery of stalled replication forks.

    PubMed

    Chaudhury, Indrajit; Stroik, Daniel R; Sobeck, Alexandra

    2014-11-01

    Fanconi anemia (FA) is a cancer predisposition syndrome characterized by cellular hypersensitivity to DNA interstrand cross-links (ICLs). Within the FA pathway, an upstream core complex monoubiquitinates and recruits the FANCD2 protein to ICLs on chromatin. Ensuing DNA repair involves the Fanconi-associated nuclease 1 (FAN1), which interacts selectively with monoubiquitinated FANCD2 (FANCD2(Ub)) at ICLs. Importantly, FANCD2 has additional independent functions: it binds chromatin and coordinates the restart of aphidicolin (APH)-stalled replication forks in concert with the BLM helicase, while protecting forks from nucleolytic degradation by MRE11. We identified FAN1 as a new crucial replication fork recovery factor. FAN1 joins the BLM-FANCD2 complex following APH-mediated fork stalling in a manner dependent on MRE11 and FANCD2, followed by FAN1 nuclease-mediated fork restart. Surprisingly, APH-induced activation and chromatin recruitment of FAN1 occur independently of the FA core complex or the FAN1 UBZ domain, indicating that the FANCD2(Ub) isoform is dispensable for functional FANCD2-FAN1 cross talk during stalled fork recovery. In the absence of FANCD2, MRE11 exonuclease-promoted access of FAN1 to stalled forks results in severe FAN1-mediated nucleolytic degradation of nascent DNA strands. Thus, FAN1 nuclease activity at stalled replication forks requires tight regulation: too little inhibits fork restart, whereas too much causes fork degradation.

  16. Environmental Assessment - Construct a Ground-to-Air Transmitter and Receiver (GATR) Facility at Grand Forks Air Force Base

    DTIC Science & Technology

    2006-06-06

    are long and severe with almost continuous snow cover. The spring and fall seasons are generally short transition periods. The average annual...the late fall, winter, and spring , and from the southeast during the summer. Grand Forks County is included in the ND Air Quality Control Region...approximately 10 miles northeast of Grand Forks AFB, the mean discharge of the Turtle River is 50.3 feet cubed per second (ft3/s). Peak flows

  17. Diel changes in stable carbon isotope ratios and trace element concentrations in the Clark Fork River, MT.

    NASA Astrophysics Data System (ADS)

    Parker, S.; Gammons, C.; Degrandpre, M.

    2004-12-01

    A diel (24-hr) water sampling was conducted on the Clark Fork River near Deer Lodge, Montana from 31-July to 1-August of 2003. The Clark Fork River is located in southwestern Montana and its upper reaches have been heavily affected by historic mining and smelting activities in the Butte and Anaconda areas. River floodplains and sediment beds contain significant quantities of metals (iron, aluminum, copper, zinc, lead, cadmium.) and arsenic. Two sites about 1.2 km apart, were sampled with a mean transit time for the water of 2.5 hours between the sites. The river in the study reach is characterized by oxic conditions, moderate alkalinity, moderate biological productivity and a pH range of about 8.0 to 8.5 during the summer low water months. During the mid-summer months, water in the Clark Fork River and its tributary streams is diverted for irrigation. Some of this water returns to the main stem in a chemically modified form as surface or groundwater return flow. This greatly complicates the hydrogeology and nutrient balance of the watershed. The two samplings sites used in this study make it possible to analyze the changes in chemical and physical properties of the water as it travels between the sites. Results reported here show that there is a large degree of temporal and spatial variability across the study area. In situ instruments were deployed and hourly water samples were collected for analysis from both sites. Diel concentration cycles are documented for dissolved forms of manganese, zinc and nitrate. Particulate forms of zinc, aluminum, copper, iron and manganese are shown to undergo twenty-four hour concentration changes. Total suspended solids (TSS) also show a diel change with the mass of TSS increasing at night. Dissolved arsenic is shown to undergo a diurnal concentration cycle at both sampling sites that was out of phase by the average 2.5 hour transit time between the two sites. This arsenic fluctuation may be a pulse of As that is being advected

  18. Hydrologic, water-quality, and biological characteristics of the North Fork Flathead River, Montana, water years 2007-2008

    USGS Publications Warehouse

    Mills, Taylor J.; Schweiger, E. William; Mast, M. Alisa; Clow, David W.

    2012-01-01

    In water year 2007, the U.S. Geological Survey, in cooperation with the National Park Service, began a 2-year study to collect hydrologic, water-quality, and biological data to provide a baseline characterization of the North Fork Flathead River from the United States-Canada border to its confluence with the Middle Fork of the Flathead River near Columbia Falls, Montana. Although mining in the Canadian portion of the North Fork Basin was banned in 2010 by a Memorandum of Understanding issued by the Province of British Columbia, baseline characterization was deemed important for the evaluation of any potential future changes in hydrology, water quality, or aquatic biology in the basin. The North Fork Basin above Columbia Falls (including Canada) drains an area of 1,564 square miles, and the study area encompasses the portion of the basin in Montana, which is 1,126 square miles. Seasonal patterns in the hydrology of the North Fork are dominated by the accumulation and melting of seasonal snowpack in the basin. Low-flow conditions occurred during the late-summer, fall, and winter months, and high-flow conditions coincided with the spring snowmelt. Substantial gains in streamflow occurred along the study reach of the North Fork, 85 percent of which were accounted for by tributary inflows during low-flow conditions, indicating unmeasured streamflow inputs along the main stem were 15 percent or less.

  19. The RecQ DNA helicase Rqh1 constrains Exonuclease 1-dependent recombination at stalled replication forks

    PubMed Central

    Osman, Fekret; Ahn, Jong Sook; Lorenz, Alexander; Whitby, Matthew C.

    2016-01-01

    DNA double-strand break (DSB) repair by homologous recombination (HR) involves resection of the break to expose a 3′ single-stranded DNA tail. In budding yeast, resection occurs in two steps: initial short-range resection, performed by Mre11-Rad50-Xrs2 and Sae2; and long-range resection catalysed by either Exo1 or Sgs1-Dna2. Here we use genetic assays to investigate the importance of Exo1 and the Sgs1 homologue Rqh1 for DNA repair and promotion of direct repeat recombination in the fission yeast Schizosaccharomyces pombe. We find that Exo1 and Rqh1 function in alternative redundant pathways for promoting survival following replication fork breakage. Exo1 promotes replication fork barrier-induced direct repeat recombination but intriguingly limits recombination induced by fork breakage. Direct repeat recombination induced by ultraviolet light depends on either Exo1 or Rqh1. Finally, we show that Rqh1 plays a major role in limiting Exo1-dependent direct repeat recombination induced by replication fork stalling but only a minor role in constraining recombination induced by fork breakage. The implications of our findings are discussed in the context of the benefits that long-range resection may bring to processing perturbed replication forks. PMID:26957021

  20. The RecQ DNA helicase Rqh1 constrains Exonuclease 1-dependent recombination at stalled replication forks.

    PubMed

    Osman, Fekret; Ahn, Jong Sook; Lorenz, Alexander; Whitby, Matthew C

    2016-03-09

    DNA double-strand break (DSB) repair by homologous recombination (HR) involves resection of the break to expose a 3' single-stranded DNA tail. In budding yeast, resection occurs in two steps: initial short-range resection, performed by Mre11-Rad50-Xrs2 and Sae2; and long-range resection catalysed by either Exo1 or Sgs1-Dna2. Here we use genetic assays to investigate the importance of Exo1 and the Sgs1 homologue Rqh1 for DNA repair and promotion of direct repeat recombination in the fission yeast Schizosaccharomyces pombe. We find that Exo1 and Rqh1 function in alternative redundant pathways for promoting survival following replication fork breakage. Exo1 promotes replication fork barrier-induced direct repeat recombination but intriguingly limits recombination induced by fork breakage. Direct repeat recombination induced by ultraviolet light depends on either Exo1 or Rqh1. Finally, we show that Rqh1 plays a major role in limiting Exo1-dependent direct repeat recombination induced by replication fork stalling but only a minor role in constraining recombination induced by fork breakage. The implications of our findings are discussed in the context of the benefits that long-range resection may bring to processing perturbed replication forks.

  1. A rotary pumping model for helicase function of MCM proteins at a distance from replication forks.

    PubMed

    Laskey, Ronald A; Madine, Mark A

    2003-01-01

    We propose an integrated model for eukaryotic DNA replication to explain the following problems: (1) How is DNA spooled through fixed sites of replication? (2) What and where are the helicases that unwind replicating DNA? (3) Why are the best candidates for replicative helicases, namely mini-chromosome maintenance (MCM) proteins, not concentrated at the replication fork? (4) How do MCM proteins spread away from loading sites at origins of replication? We draw on recent discoveries to argue that the MCM hexameric ring is a rotary motor that pumps DNA along its helical axis by simple rotation, such that the movement resembles that of a threaded bolt through a nut, and we propose that MCM proteins act at a distance from the replication fork to unwind DNA. This model would place DNA replication in a growing list of processes, such as recombination and virus packaging, that are mediated by ring-shaped ATPases pumping DNA by helical rotation.

  2. Bend and refractive index sensing based on the tuning fork fiber

    NASA Astrophysics Data System (ADS)

    Sun, Bo; Li, Xuyou; Yu, Yingying; He, Kunpeng

    2015-08-01

    A fiber-optic based on the tuning fork structure is investigated for bend and refractive index (RI). The new bend/RI sensor based on the tuning fork structure is ease of fabrication, low cost, and simple signal acquisition. The operation principle relies on the power coupling of two cores inputted into light simultaneously. The beam-propagation method (BPM) is employed for modeling the propagation of light along the optical fiber sensing device proposed. The simulation results show that it exhibits very high sensitivity, accuracy and wide dynamic range in making curvature and RI measurements. The bending sensitivity is about 0.01184 W/m-1 at curvatures ranging from 0 to 50 m-1, the RI sensitivity is about -1.5557, -22.3031 and -102.44878 W/RIU at refractive indexes ranging from 1.33-1.418, 1.418-1.45 and 1.45-1.456, respectively.

  3. Acute MUS81 depletion leads to replication fork slowing and a constitutive DNA damage response

    PubMed Central

    Xing, Meichun; Wang, Xiaohui; Palmai-Pallag, Timea; Shen, Huahao; Helleday, Thomas; Hickson, Ian D.; Ying, Songmin

    2015-01-01

    The MUS81 protein belongs to a conserved family of DNA structure-specific nucleases that play important roles in DNA replication and repair. Inactivation of the Mus81 gene in mice has no major deleterious consequences for embryonic development, although cancer susceptibility has been reported. We have investigated the role of MUS81 in human cells by acutely depleting the protein using shRNAs. We found that MUS81 depletion from human fibroblasts leads to accumulation of ssDNA and a constitutive DNA damage response that ultimately activates cellular senescence. Moreover, we show that MUS81 is required for efficient replication fork progression during an unperturbed S-phase, and for recovery of productive replication following replication stalling. These results demonstrate essential roles for the MUS81 nuclease in maintenance of replication fork integrity. PMID:26415217

  4. Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae

    PubMed Central

    Azvolinsky, Anna; Giresi, Paul G.; Lieb, Jason D.; Zakian, Virginia A.

    2009-01-01

    SUMMARY Replication forks face multiple obstacles that slow their progression. By two-dimensional gel analysis, yeast forks pause at stable DNA protein complexes, and this pausing is greatly increased in the absence of the Rrm3 helicase. We used a genome wide approach to identify 96 sites of very high DNA polymerase binding in wild type cells. Most of these binding sites were not previously identified pause sites. Rather, the most highly represented genomic category among high DNA polymerase binding sites was the open reading frames (ORFs) of highly transcribed RNA polymerase II genes. Twice as many pause sites were identified in rrm3 compared to wild type cells as pausing in this strain occurred at both highly transcribed RNA polymerase II genes and the previously identified protein DNA complexes. ORFs of highly transcribed RNA polymerase II genes are the first class of natural pause sites that are not exacerbated in rrm3 cells. PMID:19560424

  5. Impacts of hikers on aquatic invertebrates in the North Fork of the Virgin River, Utah

    USGS Publications Warehouse

    Caires, A.M.; Vinson, M.R.; Brasher, A.M.D.

    2010-01-01

    Effects of in-stream hiking on benthic standing stocks and drifting aquatic invertebrates and on organic matter were examined in the North Fork of the Virgin River, Zion National Park, Washington County, Utah. Densities of drifting aquatic invertebrates and organic matter increased with increasing numbers of hikers and reached a threshold level at high numbers of hikers. However, there was no apparent longer-term effect on standing stocks of benthic invertebrates or on organic matter. Densities of benthic invertebrates and organic matter did not differ among sites. Results suggest that in-stream hiking in the North Fork of the Virgin River increases drifting by invertebrates, but invertebrates from nearby undisturbed patches readily colonize impacted reaches.

  6. Initial Geomorphic Responses to Removal of Milltown Dam, Clark Fork River, Montana, USA

    NASA Astrophysics Data System (ADS)

    Wilcox, A. C.; Brinkerhoff, D.; Woelfle-Erskine, C.

    2008-12-01

    The removal of Milltown Dam on the Clark Fork River, Montana, USA, is creating a field-scale experiment on upstream and downstream responses to dam removal and on how gravel-bed rivers respond to sediment pulses. Milltown Dam was removed in 2008, reconnecting the Clark Fork River to its upstream basin in terms of sediment transport and fish passage. This dam removal is especially notable because (1) it is the largest dam removal to date in the United States in terms of the volume of reservoir sediment potentially available for downstream transport (over 3 million m3; 1.7 million m3 are being mechanically removed); and (2) the dam is the downstream end of the largest Superfund site in the United States, the Clark Fork Complex, and reservoir sediments are composed largely of contaminated mine tailings. Data collection on pre- and post-dam removal channel morphology, bed sediment characteristics, and sediment loads are being used to investigate spatial and temporal patterns of sediment transport and deposition associated with this dam removal. In the first several months following breaching of the dam, snowmelt runoff with a 3-year recurrence interval peak caused substantial erosion and downstream transport of metals-laden sediments from Milltown reservoir. Reservoir sediments in the Clark Fork arm of Milltown reservoir eroded at levels far exceeding modeling predictions as a result of both incision to the new base level created by dam removal and bank retreat of over 200 m in reaches upstream of a constructed bypass reach and remediation area. Copper and other metals in these eroded reservoir sediments provide a tracer for identifying whether sediment deposits observed downstream of the dam originated from Milltown reservoir or uncontaminated tributaries and indicate that Milltown sediments have reached over 200 km downstream. Downstream deposition has been greatest along channel margins and in side-channel areas, whereas the transport capacity of the active channel

  7. New species of Triplocania Roesler with forewing M3 forked (Psocodea: 'Psocoptera': Ptiloneuridae), from Brazil.

    PubMed

    Da Silva Neto, Alberto Moreira; Rafael, José Albertino; Aldrete, Alfonso N García

    2014-07-16

    Four new Brazilian species of Triplocania with forewing M3 forked are described and illustrated based on male specimens, namely: Triplocania lamasi n.sp. (Mato Grosso: Brazil), Triplocania mariateresae n.sp. (Rio de Janeiro: Brazil), Triplocania newi n.sp. (Tocantins: Brazil) and Triplocania plaumanni n.sp. (Santa Catarina: Brasil). They differ from all the other species in the genus, in which the males are known, by the hypandrium and phallosome structures.

  8. Slow Replication Fork Velocity of Homologous Recombination-Defective Cells Results from Endogenous Oxidative Stress

    PubMed Central

    Magdalou, Indiana; Machon, Christelle; Dardillac, Elodie; Técher, Hervé; Guitton, Jérôme; Debatisse, Michelle; Lopez, Bernard S.

    2016-01-01

    Replications forks are routinely hindered by different endogenous stresses. Because homologous recombination plays a pivotal role in the reactivation of arrested replication forks, defects in homologous recombination reveal the initial endogenous stress(es). Homologous recombination-defective cells consistently exhibit a spontaneously reduced replication speed, leading to mitotic extra centrosomes. Here, we identify oxidative stress as a major endogenous source of replication speed deceleration in homologous recombination-defective cells. The treatment of homologous recombination-defective cells with the antioxidant N-acetyl-cysteine or the maintenance of the cells at low O2 levels (3%) rescues both the replication fork speed, as monitored by single-molecule analysis (molecular combing), and the associated mitotic extra centrosome frequency. Reciprocally, the exposure of wild-type cells to H2O2 reduces the replication fork speed and generates mitotic extra centrosomes. Supplying deoxynucleotide precursors to H2O2-exposed cells rescued the replication speed. Remarkably, treatment with N-acetyl-cysteine strongly expanded the nucleotide pool, accounting for the replication speed rescue. Remarkably, homologous recombination-defective cells exhibit a high level of endogenous reactive oxygen species. Consistently, homologous recombination-defective cells accumulate spontaneous γH2AX or XRCC1 foci that are abolished by treatment with N-acetyl-cysteine or maintenance at 3% O2. Finally, oxidative stress stimulated homologous recombination, which is suppressed by supplying deoxynucleotide precursors. Therefore, the cellular redox status strongly impacts genome duplication and transmission. Oxidative stress should generate replication stress through different mechanisms, including DNA damage and nucleotide pool imbalance. These data highlight the intricacy of endogenous replication and oxidative stresses, which are both evoked during tumorigenesis and senescence initiation

  9. Brief reconnaissance study for the addition of hydropower for Carr Fork Dam, Sassafras, Kentucky

    SciTech Connect

    Gebhard, T.G. Jr.

    1982-05-24

    The feasibility of retrofitting the Carr Fork Dam near Hazard, KY for power generation was examined. This dam has a developable head of 80 ft and was built in 1975 to provide flood protection. The study of environmental, institutional, safety, and economic factors showed that the total investment cost would be $909,600 and that hydroelectric power development at this site is not feasible unless a higher price could be obtained for the power sold. (LCL)

  10. Tumor Suppression by BRCA-1: A Critical Role at DNA Replication Forks

    DTIC Science & Technology

    2006-10-01

    free extracts derived from Xenopus laevis eggs that support: 1. Semi-conservative, cell-cycle regulated DNA replication; 2. Many facets of the DNA...extracts derived from Xenopus laevis eggs that support: 1. Semi-conservative, cell-cycle regulated DNA replication; 2. Many facets of the DNA damage...assess the consequences of complete loss of BRCA1/BARD1 on fork progression and stalling. BODY Cell-free systems derived from Xenopus eggs can

  11. Slow Replication Fork Velocity of Homologous Recombination-Defective Cells Results from Endogenous Oxidative Stress.

    PubMed

    Wilhelm, Therese; Ragu, Sandrine; Magdalou, Indiana; Machon, Christelle; Dardillac, Elodie; Técher, Hervé; Guitton, Jérôme; Debatisse, Michelle; Lopez, Bernard S

    2016-05-01

    Replications forks are routinely hindered by different endogenous stresses. Because homologous recombination plays a pivotal role in the reactivation of arrested replication forks, defects in homologous recombination reveal the initial endogenous stress(es). Homologous recombination-defective cells consistently exhibit a spontaneously reduced replication speed, leading to mitotic extra centrosomes. Here, we identify oxidative stress as a major endogenous source of replication speed deceleration in homologous recombination-defective cells. The treatment of homologous recombination-defective cells with the antioxidant N-acetyl-cysteine or the maintenance of the cells at low O2 levels (3%) rescues both the replication fork speed, as monitored by single-molecule analysis (molecular combing), and the associated mitotic extra centrosome frequency. Reciprocally, the exposure of wild-type cells to H2O2 reduces the replication fork speed and generates mitotic extra centrosomes. Supplying deoxynucleotide precursors to H2O2-exposed cells rescued the replication speed. Remarkably, treatment with N-acetyl-cysteine strongly expanded the nucleotide pool, accounting for the replication speed rescue. Remarkably, homologous recombination-defective cells exhibit a high level of endogenous reactive oxygen species. Consistently, homologous recombination-defective cells accumulate spontaneous γH2AX or XRCC1 foci that are abolished by treatment with N-acetyl-cysteine or maintenance at 3% O2. Finally, oxidative stress stimulated homologous recombination, which is suppressed by supplying deoxynucleotide precursors. Therefore, the cellular redox status strongly impacts genome duplication and transmission. Oxidative stress should generate replication stress through different mechanisms, including DNA damage and nucleotide pool imbalance. These data highlight the intricacy of endogenous replication and oxidative stresses, which are both evoked during tumorigenesis and senescence initiation

  12. Hydrology and water chemistry of shallow aquifers along the upper Clark Fork, western Montana

    USGS Publications Warehouse

    Nimick, D.A.

    1993-01-01

    Shallow ground-water resources in western Montana have been developed primarily in Quaternary alluvium and Tertiary deposits, although bedrock supplies water to wells locally. Well-yield and trans- missivity values were largest (medians of 40 gallons per minute and 970 feet squared per day, respec- tively) in alluvium and smallest (medians of 15 gallons per minute and 130 feet squared per day, respectively) in bedrock. Chemical composition of ground water was dominated by calcium, magnesium, and bicarbonate derived from dissolution of carbonate minerals. Other water types may be the result of ion exchange (increased sodium) and mixing of geothermal water or leachate from mine wastes (increased sulfate). Although concen- trations of arsenic were relatively small (maximum of 20 micrograms per liter), they were somewhat larger in alluvium within 300 feet of the Clark Fork. Elevated concentrations of cadmium (maximum of 6 micrograms per liter) were measured in water from one well downgradient from tailings ponds. Although mining and smelting activities have resulted in widespread distribution of contami- nants in the Clark Fork valley, this study indicates that ground water contains elevated concentrations of trace elements only locally. Streamflow data indicate significant ground-water inflow to the Clark Fork in two reaches. Between Racetrack and Garrison, irrigation-return flow probably augments naturally occurring ground-water discharge. Between Jens and Cramer Creek, geo- thermal water from bedrock flows through alluvium to the river. In the Clark Fork, the maximum arsenic concentration was 8.1 micrograms per liter; copper and manganese concentrations were largest at Warm Springs (maximums of 14 and 350 micrograms per liter, respectively) and decreased downstream.

  13. Environmental Assessment: Building Addition Building 233 at Grand Forks AFB, North Dakota

    DTIC Science & Technology

    2004-03-22

    construction methods. With respect to construction, we have the following comments: 1. All necessary measures must be taken to minimize fugitive dust...scheduled in the area. In addition, we believe the proposed activities are consistent with the State Implementation Plan for the Control of Air...0527, Draft EA, Addition to Building 233, Grand Forks AFB, ND. Dear Ms. Durako: We have reviewed: Environmental Assessment: Building Addition

  14. Environmental Assessment: Construct Fire Station at Grand Forks Air Force Base

    DTIC Science & Technology

    2006-03-01

    Base Development CEQ Council on Environmental Quality CES Civil Engineer Squadron CEV Environmental Management Flight CFR Code of Federal...Act RAPCON Radar Approach Control USACE U.S. Army Corps of Engineers USAF U.S. Air Force VII SECTION 1 Purpose of and Need for Action 1.1...SPONSORING/MONITORING AGENCY NAME(S) AND ADDRESS(ES) 319 Civil Engineer Squadron, 525 Tuskegee Airmen Blvd, Grand Forks AFB, ND, 58205-6434 10

  15. Gaussian Random Fields Methods for Fork-Join Network with Synchronization Constraints

    DTIC Science & Technology

    2014-12-22

    research papers, under review in Mathematics of Operations Research (minor revision) and Annals of Applied Probability. One paper was on the finalist...2.00 1.00 Hongyuan Lu, Guodong Pang. Heavy Traffic Limits for A Fork-Join Network In the Halfin-Whitt Regime, Annals of Applied Probability (11 2014...fellowships for further studies in science , mathematics, engineering or technology fields: Student Metrics This section only applies to graduating

  16. A retrospective study of the chemical analysis cost for the remediation of Lower East Fork Poplar Creek, Oak Ridge, Tennessee

    SciTech Connect

    Klatt, L.N.

    1998-06-01

    A retrospective study of the remediation of Lower East Fork Poplar Creek (LEFPC) in Oak Ridge, Tennessee was completed. The study was conducted by reviewing the public Comprehensive Environmental Response, Compensation, and Liability Act record documents associated with the remediation of LEFPC and through discussions with the project staff involved or familiar with the project. The remediation took place in two phases. The first phase involved the excavation of about 5,560 yd{sup 3} of soil at the National Oceanic and Atmospheric Administration (NOAA) locations in 1996. The second phase involved the excavation of 39,200 yd{sup 3} at another NOAA location and at the Bruner location in 1997. For the entire project (remedial investigation through cleanup), a total of 7,708 samples (1 sample for each 5.8 yd{sup 3} of soil remediated) were analyzed for mercury. The project obtained special regulatory approval to use two methods for the determination of mercury in soils that are not part of the Resource Conservation and Recovery Act SW-846 methods manual. The mercury analysis cost was $678,000, which represents 9.6% of the cleanup cost. During the cleanup phase of the project, an on-site laboratory was used. The estimated cost savings that the on-site laboratory provided fall into two categories: direct reduction of costs associated with chemical analysis and sample shipment totaling approximately $38,000, which represents a 5.3% savings relative to the estimated cost of using an off-site laboratory, and savings in the amount of $890,000 (12.5% of the $7.1 M cleanup cost), associated with expediting execution of the cleanup work by providing rapid (< 3 hours) sample result turnaround time. The manner in which the analytical services were procured for the LEFPC project suggest that the development of new chemical analysis technology must address deployment, performance, regulatory, robustness, reliability, and business appropriateness factors if the technology is to be

  17. On bandwidth characteristics of tuning fork micro-gyroscope with mechanically coupled sense mode.

    PubMed

    Ni, Yunfang; Li, Hongsheng; Huang, Libin; Ding, Xukai; Wang, Haipeng

    2014-07-21

    The bandwidth characteristics of a tuning fork micro-gyroscope with mechanically coupled sense mode were investigated in this paper to provide some references for mechanical bandwidth design. The concept of sense mode mechanical coupling is introduced first. Theoretical frequency response analyses were then carried out on the mechanical part of the gyroscope. Equations representing the relationships between the differential output signal and the frequency of the input angular rate were deduced in full frequency range and further simplified in low frequency range. Based on these equations, bandwidth characteristics under ideal and non-ideal conditions are discussed. Analytical results show that under ideal conditions, the bandwidth characteristics of a tuning fork micro-gyroscope are similar to those of a single mass micro-gyroscope, but under non-ideal conditions, especially when sense mass and/or stiffness are asymmetric, the bandwidth characteristics would be quite different because the in-phase mode would participate in the anti-phase vibration response. Experimental verifications were carried out on two micro-gyroscope prototypes designed in our laboratory. The deduced equations and analytical results can be used in guiding the mechanical bandwidth design of tuning fork micro-gyroscopes with mechanically coupled sense mode.

  18. Nucleoid occlusion prevents cell division during replication fork arrest in Bacillus subtilis

    PubMed Central

    Bernard, Remi; Marquis, Kathleen A.; Rudner, David Z.

    2010-01-01

    Summary How bacteria respond to chromosome replication stress has been traditionally studied using temperature-sensitive mutants and chemical inhibitors. These methods inevitably arrest all replication and lead to induction of transcriptional responses and inhibition of cell division. Here, we used repressor proteins bound to operator arrays to generate a single stalled replication fork. These replication roadblocks impeded replisome progression on one arm, leaving replication of the other arm and re-initiation unaffected. Remarkably, despite robust generation of RecA-GFP filaments and a strong block to cell division during the roadblock, patterns of gene expression were not significantly altered. Consistent with these findings, division inhibition was not mediated by the SOS-induced regulator YneA nor by RecA-independent repression of ftsL. In support of the idea that nucleoid occlusion prevents inappropriate cell division during fork arrest, immature FtsZ-rings formed adjacent to the DNA mass but rarely on top of it. Furthermore, mild alterations in chromosome compaction resulted in cell division that guillotined the DNA. Strikingly, the nucleoid occlusion protein Noc had no discernable role in division inhibition. Our data indicate that Noc-independent nucleoid occlusion prevents inappropriate cell division during replication fork arrest. They further suggest that Bacillus subtilis normally manages replication stress rather than inducing a stress-response. PMID:20807205

  19. Replication-fork stalling and processing at a single psoralen interstrand crosslink in Xenopus egg extracts.

    PubMed

    Le Breton, Cyrille; Hennion, Magali; Arimondo, Paola B; Hyrien, Olivier

    2011-04-15

    Interstrand crosslink (ICL)-inducing agents block the separation of the two DNA strands. They prevent transcription and replication and are used in clinics for the treatment of cancer and skin diseases. Here, we have introduced a single psoralen ICL at a specific site in plasmid DNA using a triplex-forming-oligonucleotide (TFO)-psoralen conjugate and studied its repair in Xenopus egg extracts that support nuclear assembly and replication of plasmid DNA. Replication forks arriving from either side stalled at the psoralen ICL. In contrast to previous observations with other ICL-inducing agents, the leading strands advanced up to the lesion without any prior pausing. Subsequently, incisions were introduced on one parental strand on both sides of the ICL. These incisions could be detected whether one or both forks reached the ICL. Using small molecule inhibitors, we found that the ATR-Chk1 pathway, but not the ATM-Chk2 pathway, stimulated both the incision step and the subsequent processing of the broken replication intermediates. Our results highlight both similarities and differences in fork stalling and repair induced by psoralen and by other ICL-forming agents.

  20. On Bandwidth Characteristics of Tuning Fork Micro-Gyroscope with Mechanically Coupled Sense Mode

    PubMed Central

    Ni, Yunfang; Li, Hongsheng; Huang, Libin; Ding, Xukai; Wang, Haipeng

    2014-01-01

    The bandwidth characteristics of a tuning fork micro-gyroscope with mechanically coupled sense mode were investigated in this paper to provide some references for mechanical bandwidth design. The concept of sense mode mechanical coupling is introduced first. Theoretical frequency response analyses were then carried out on the mechanical part of the gyroscope. Equations representing the relationships between the differential output signal and the frequency of the input angular rate were deduced in full frequency range and further simplified in low frequency range. Based on these equations, bandwidth characteristics under ideal and non-ideal conditions are discussed. Analytical results show that under ideal conditions, the bandwidth characteristics of a tuning fork micro-gyroscope are similar to those of a single mass micro-gyroscope, but under non-ideal conditions, especially when sense mass and/or stiffness are asymmetric, the bandwidth characteristics would be quite different because the in-phase mode would participate in the anti-phase vibration response. Experimental verifications were carried out on two micro-gyroscope prototypes designed in our laboratory. The deduced equations and analytical results can be used in guiding the mechanical bandwidth design of tuning fork micro-gyroscopes with mechanically coupled sense mode. PMID:25051030

  1. The progression of replication forks at natural replication barriers in live bacteria

    PubMed Central

    Moolman, M. Charl; Tiruvadi Krishnan, Sriram; Kerssemakers, Jacob W.J.; de Leeuw, Roy; Lorent, Vincent; Sherratt, David J.; Dekker, Nynke H.

    2016-01-01

    Protein–DNA complexes are one of the principal barriers the replisome encounters during replication. One such barrier is the Tus–ter complex, which is a direction dependent barrier for replication fork progression. The details concerning the dynamics of the replisome when encountering these Tus–ter barriers in the cell are poorly understood. By performing quantitative fluorescence microscopy with microfuidics, we investigate the effect on the replisome when encountering these barriers in live Escherichia coli cells. We make use of an E. coli variant that includes only an ectopic origin of replication that is positioned such that one of the two replisomes encounters a Tus–ter barrier before the other replisome. This enables us to single out the effect of encountering a Tus–ter roadblock on an individual replisome. We demonstrate that the replisome remains stably bound after encountering a Tus–ter complex from the non-permissive direction. Furthermore, the replisome is only transiently blocked, and continues replication beyond the barrier. Additionally, we demonstrate that these barriers affect sister chromosome segregation by visualizing specific chromosomal loci in the presence and absence of the Tus protein. These observations demonstrate the resilience of the replication fork to natural barriers and the sensitivity of chromosome alignment to fork progression. PMID:27166373

  2. Brown trout avoidance of metals in water characteristic of the Clark Fork River, Montana

    USGS Publications Warehouse

    Woodward, Daniel F.; Hansen, James A.; Bergman, Harold L.; Delonay, Aaron J.; Little, Edward E.

    1995-01-01

    The avoidance response of brown trout (Salmo trutta) to mixtures of cadmium, copper, lead, and zinc was determined in water simulating the Clark Fork River, Montana. Effects of acidification on the avoidance response were also evaluated. Tests were conducted in a cylindrical chamber that received reference water at one end and metal-contaminated water at the other; a distinct boundary formed at the center where the chamber drained. A 1 × mixture of the four metals (Cd, 1.1 μg/L; Cu, 12 μg/L; Pb, 3.2 μg/L; and Zn, 55 μg/L) that was representative of the ambient metals concentrations of the Clark Fork River resulted in avoidance by brown trout. Brown trout also avoided 0.5×, 2×, 4×, and 10× mixtures but not a 0.1 × mixture. A reduction in pH from 8.0 to either 7.0, 6.0, or 5.0 resulted in significant avoidance. Avoidance reactions to metals, similar to those observed in our laboratory experiments, may contribute to the depression of brown trout populations in the Clark Fork River.

  3. A tip-attached tuning fork sensor for the control of DNA translocation through a nanopore

    NASA Astrophysics Data System (ADS)

    Hyun, Changbae; Kaur, Harpreet; Huang, Tao; Li, Jiali

    2017-02-01

    In this work, we demonstrate that a tuning fork can be used as a force detecting sensor for manipulating DNA molecules and for controlling the DNA translocation rate through a nanopore. One prong of a tuning fork is glued with a probe tip which DNA molecules can be attached to. To control the motion and position of the tip, the tuning fork is fixed to a nanopositioning system which has sub-nanometer position control. A fluidic chamber is designed to fulfill many requirements for the experiment: for the access of a DNA-attached tip approaching to a nanopore, for housing a nanopore chip, and for measuring ionic current through a solid-state nanopore with a pair of electrodes. The location of a nanopore is first observed by transmission electron microscopy, and then is determined inside the liquid chambers with an optical microscope combined with local scanning the probe tip on the nanopore surface. When a DNA-immobilized tip approaches a membrane surface near a nanopore, free ends of the immobilized DNA strings can be pulled and trapped into the pore by an applied voltage across the nanopore chip, resulting in an ionic current reduction through the nanopore. The trapped DNA molecules can be lifted up from the nanopore at a user controlled speed. This integrated apparatus allows manipulation of biomolecules (DNA, RNA, and proteins) attached to a probe tip with sub-nanometer precision, and simultaneously allows measurement of the biomolecules by a nanopore device.

  4. Stream Habitat Modeling to Support Water Management Decisions for the North Fork Shenandoah River, Virginia

    NASA Astrophysics Data System (ADS)

    Averett, A.; Persinger, J. W.; Orth, D. J.

    2005-05-01

    The Shenandoah River and its tributaries, the North Fork and South Fork, represent an excellent model of a multiple use river. Due to documented fish kills, frequent low flow events, and proximity to the Washington D.C. metropolitan area, there is growing concern regarding the sustainability of this natural resource. In 1999, a four-year IFIM (Instream Flow Incremental Methodology) study was initiated to evaluate the response of hydraulics and fish habitat to low flow conditions in the North Fork Shenandoah River (NFSR) basin. Habitat suitability criteria were developed onsite for guilds of riffle, fast generalist, pool-run, and pool-cover fishes. Habitat responses to stream flows were quantified for these habitat guilds and habitat conditions conducive to nuisance algal blooms. In addition, we compared usable habitat conditions under baseline and alternative hydrologic time series corresponding to water use restrictions. Model results were used to identify aquatic conservation flows and establish a stepwise process for implementing aquatic conservation flow management in the NFSR basin. This process will facilitate the adoption of water use conservation measures at appropriate times during future extreme droughts.

  5. Establishing a context for river rehabilitation, North Fork Gunnison River, Colorado.

    PubMed

    Jaquette, Christopher; Wohl, Ellen; Cooper, David

    2005-05-01

    Initial river rehabilitation efforts along the North Fork Gunnison River in Colorado focused on the use of in-stream structures and channel stabilization to create a single-thread channel with pools along a braided river. These efforts were based on the assumption that the river's braided planform results primarily from land use during the past century. In order to establish a context for further rehabilitation, we evaluated the possibility that the river might be braided as a result of processes independent of land use. We estimated volume, grain-size distribution, and lithology of sediment sources along the river corridor and evaluated the planform stability of the river during the past century using historical sources, aerial photographs covering 1939-1997, and comparison of bankfull discharge and gradient in the study area to values published for braided and meandering rivers. Our results indicate that the North Fork Gunnison River has been primarily braided in its lower reaches during the past few hundred years, although the channel planform tends toward a single-thread channel during decades of lower precipitation and discharge. Although land use is not the primary cause of braiding along the North Fork Gunnison River, it has decreased channel stability, and rehabilitation efforts should be designed to reduce these effects. Our results illustrate the importance of planning river rehabilitation measures within a historical context that accounts for both catchment-scale and reach-scale controls on channel processes and planform.

  6. Vibration amplitude of a tip-loaded quartz tuning fork during shear force microscopy scanning.

    PubMed

    Sandoz, P; Friedt, J-M; Carry, E

    2008-08-01

    This Note reports on experimental results obtained with a recently published vision method for in-plane vibration measurement [Sandoz et al., Rev. Sci. Instrum. 78, 023706 (2007)]. The latter is applied to a tip-loaded quartz tuning fork frequently used in scanning probe microscopy for shear-force monitoring of the tip-sample distance. The vibration amplitude of the tip-loaded prong is compared to that of the free one and the damping induced by tip-surface interactions is measured. The tuning-fork behavior is characterized during approaches from free space to surface contact. Tip-surface contact is clearly identified by a drastic reduction in the prong vibration amplitude. However, no differences were observed between hydrophilic and hydrophobic surfaces. Experiments reported here show that the vibration amplitude of the quartz tuning fork in free space is a good estimate of the vibration amplitude of the tip interacting with the sample surface during shear force sample-tip feedback. The experimental setup for measuring the amplitude is easily integrated in an inverted microscope setup on which the shear force microscope is installed for simultaneous scanning probe and optical microscopy analysis of the sample.

  7. Vibration amplitude of a tip-loaded quartz tuning fork during shear force microscopy scanning

    NASA Astrophysics Data System (ADS)

    Sandoz, P.; Friedt, J.-M.; Carry, É.

    2008-08-01

    This Note reports on experimental results obtained with a recently published vision method for in-plane vibration measurement [Sandoz et al., Rev. Sci. Instrum. 78, 023706 (2007)]. The latter is applied to a tip-loaded quartz tuning fork frequently used in scanning probe microscopy for shear-force monitoring of the tip-sample distance. The vibration amplitude of the tip-loaded prong is compared to that of the free one and the damping induced by tip-surface interactions is measured. The tuning-fork behavior is characterized during approaches from free space to surface contact. Tip-surface contact is clearly identified by a drastic reduction in the prong vibration amplitude. However, no differences were observed between hydrophilic and hydrophobic surfaces. Experiments reported here show that the vibration amplitude of the quartz tuning fork in free space is a good estimate of the vibration amplitude of the tip interacting with the sample surface during shear force sample-tip feedback. The experimental setup for measuring the amplitude is easily integrated in an inverted microscope setup on which the shear force microscope is installed for simultaneous scanning probe and optical microscopy analysis of the sample.

  8. Acoustic Doppler current profiling from the JGOFS Arabian Sea cruises aboard the RV T.G. THOMPSON: TN043, January 8, 1995--February 4, 1995; TN044, February 8, 1995--February 25, 1995; TN045, March 14, 1995--April 10, 1995; TN046, April 14, 1995--April 29, 1995

    SciTech Connect

    Flagg, C.N.; Kim, H.S.; Shi, Y.

    1995-09-01

    Acoustic Doppler current profiler (ADCP) data from the R/V T.G. THOMPSON is part of the core data for the US JGOFS Arabian Sea project along with hydrographic and nutrient data. Seventeen cruises on the THOMPSON are scheduled to take place between September 1994 and January 1996. This is the second in a series of data reports covering the ADCP data from the Arabian Sea JGOFS cruises TNO43 through TNO46. ADCP data are being collected on all the JGOFS Arabian Sea cruises using an autonomous data acquisition system developed for ship-of-opportunity cruises. This system, referred to as the AutoADCP, makes it possible to collect the ADCP data without the constant monitoring usually necessary and assures constant data coverage and uniform data quality. This data report presents ADCP results from the second group of four JGOFS cruises, TNO43 through TNO46, concentrating on the data collection and processing methods. The ADCP data itself reside in a CODAS data base at Brookhaven National Laboratory and is generally available to JGOFS investigators through contact with the authors. The CODAS data base and associated ADCP processing software were developed over a number of years by Eric Firing and his group at the University of Hawaii. The CODAS software is shareware available for PC`s or Unix computers and is the single most widely used ADCP processing program for ship mounted units.

  9. A cost-benefit analysis of preventative management for zebra and quagga mussels in the Colorado-Big Thompson System

    USGS Publications Warehouse

    Thomas, Catherine M.

    2010-01-01

    net benefits of preventative management strategies. This study builds a bioeconomic simulation model to predict and compare the expected economic costs of the CDOW boat inspection program ot the benefits of reduced expected control costs to water conveyance systems, hydropower generation stations, and minicipal water treatment facilities. The model is based on a case study water delivery and storage system, the Colorado-Big Thompson system. The Colorado-Big Thomspon system is an excellent example of water systems in the Rocky Mountain West. The system is nearly entirely man-made, with all of its reservoirs and delivery points connected via pipelines, tunnels, and canals. The structures and hydropower systems of the Colorado-Big Thompson system are common to other western storage and delivery systems, making the methods and insight developed from this case study transferal to other western systems. The model developed in this study contributes to the bioeconomic literature in several ways. Foremost, the model predicts the spread of dreissena mussels and associated damage costs for a connected water system in the Rocky Mountain West. Very few zebra mussel studies have focused on western water systems. Another distinguishing factor is the simultaneous consideration of spread from propagules introduced by boats and by flows. Most zebra mussel dispersal models consider boater movement patterns combined with limnological characteristics as predictors of spread. A separate set of studies have addressed mussel spread via downstream flows. To the author's knowledge, this is the first study that builds a zebra mussel spread model that specifically accounts for propagule pressure from boat introductions and from downstream flow introductions. By modeling an entire connected system, the study highlights how the spatial layout of a system, and the risk of invasion within a system affect the benefits of preventative management. This report is presented in five chapters. The first

  10. Morphological and molecular characterization of Pseudocohnilembus longisetus Thompson, 1965 from farmed black rockfish Sebastes schlegelii in Korea.

    PubMed

    Whang, Ilson; Kang, Hyun-Sil; Lee, Jehee

    2011-06-30

    The morphology, infraciliature, silverline system, and the small subunit ribosomal RNA (SSU rRNA) of the little-known marine scuticociliate Pseudocohnilembus longisetusThompson, 1965 from the diseased black rockfish Sebastes schlegelii in Korea were studied. This scuticociliate possessed the typical characteristics of the genus Pseudocohnilembus, but could be discriminated from Pseudocohnilembus hargisi, and Pseudocohnilembus persalinus in terms of the body size, shape, the number of somatic kineties and kinetids in somatic kinety 1, and the number/position of contractile vacuole pores. The SSU rRNA gene of P. longisetus was sequenced in order to gain a better understanding of appropriate phylogenetic classification. The SSU rRNA was 1754 bp and the sequence was deposited in GenBank under accession number FJ899594. The SSU rRNA gene sequences of P. longisetus had an identity of 98.1%, 96.8% and 95.3% with P. hargisi, P. persalinus, and Pseudocohnilembus marinus SSU rRNA sequences, respectively. Our population of P. longisetus belonged to the genus Pseudocohnilembus and was in an isolated position based on the SSU rRNA gene tree, which was consistent with the conclusions based on the morphological studies. However, further investigation is required to determine the pathogenicity of this species.

  11. A celebration of mechanics: from nano to macro. The J. Michael T. Thompson Festschrift issue

    PubMed Central

    Elishakoff, Isaac

    2013-01-01

    This Theme Issue is dedicated to the topic ‘Mechanics: from nano to macro’ and marks the 75th birthday of Dr J. Michael T. Thompson, Fellow of the Royal Society, whose current affiliations are as follows: (i) Honorary Fellow, Department of Applied Mathematics and Theoretical Physics, Centre for Mathematical Sciences, University of Cambridge; (ii) Emeritus Professor of Nonlinear Dynamics, Department of Civil, Environmental and Geomatic Engineering, University College London; and (iii) Professor of Theoretical and Applied Dynamics (Distinguished Sixth Century Chair, part-time), University of Aberdeen. He also serves as Chairman of the Board of Directors at ES-Consult (consulting engineers) in Copenhagen, Denmark. The pertinent question that arises from the very start is: should we first salute Michael and then describe the Theme Issue, or vice versa? Indeed, according to Blaise Pascal (1623–1662), the last thing one discovers in composing a work is what to put first. I would like to take the liberty of deviating from the tradition of the Philosophical Transactions and start with the tribute to Michael; after all he is the prime cause of this Theme Issue. PMID:23690647

  12. Effect of the Surfactant Tween 80 on the Detachment and Dispersal of Salmonella enterica Serovar Thompson Single Cells and Aggregates from Cilantro Leaves as Revealed by Image Analysis

    PubMed Central

    Huynh, Steven

    2014-01-01

    Salmonella enterica has the ability to form biofilms and large aggregates on produce surfaces, including on cilantro leaves. Aggregates of S. enterica serovar Thompson that remained attached to cilantro leaves after rigorous washing and that were present free or bound to dislodged leaf tissue in the wash suspension were observed by confocal microscopy. Measurement of S. Thompson population sizes in the leaf washes by plate counts failed to show an effect of 0.05% Tween 80 on the removal of the pathogen from cilantro leaves 2 and 6 days after inoculation. On the contrary, digital image analysis of micrographs of single cells and aggregates of green fluorescent protein (GFP)-S. Thompson present in cilantro leaf washes revealed that single cells represented 13.7% of the cell assemblages in leaf washes containing Tween 80, versus 9.3% in those without the surfactant. Moreover, Tween 80 decreased the percentage of the total S. Thompson cell population located in aggregates equal to or larger than 64 cells from 9.8% to 4.4% (P < 0.05). Regression analysis of the frequency distribution of aggregate size in leaf washes with and without Tween 80 showed that the surfactant promoted the dispersal of cells from large aggregates into smaller ones and into single cells (P < 0.05). Our study underlines the importance of investigating bacterial behavior at the scale of single cells in order to uncover trends undetectable at the population level by bacterial plate counts. Such an approach may provide valuable information to devise strategies aimed at enhancing the efficacy of produce sanitization treatments. PMID:24907336

  13. Production of autoinducer 2 in Salmonella enterica serovar Thompson contributes to its fitness in chickens but not on cilantro leaf surfaces.

    PubMed

    Brandl, M T; Miller, W G; Bates, A H; Mandrell, R E

    2005-05-01

    Food-borne illness caused by Salmonella enterica has been linked traditionally to poultry products but is associated increasingly with fresh fruits and vegetables. We have investigated the role of the production of autoinducer 2 (AI-2) in the ability of S. enterica serovar Thompson to colonize the chicken intestine and the cilantro phyllosphere. A mutant of S. enterica serovar Thompson that is defective in AI-2 production was constructed by insertional mutagenesis of luxS. The population size of the S. enterica serovar Thompson parental strain was significantly higher than that of its LuxS(-) mutant in the intestine, spleen, and droppings of chicks 12 days after their oral inoculation with the strains in a ratio of 1:1. In contrast, no significant difference in the population dynamics of the parental and LuxS(-) strain was observed after their inoculation singly or in mixtures onto cilantro plants. Digital image analysis revealed that 54% of S. enterica serovar Thompson cells were present in large aggregates on cilantro leaves but that the frequency distributions of the size of aggregates formed by the parental strain and the LuxS(-) mutant were not significantly different. Carbon utilization profiles indicated that the AI-2-producing strain utilized a variety of amino and organic acids more efficiently than its LuxS(-) mutant but that most sugars were utilized similarly in both strains. Thus, inherent differences in the nutrients available to S. enterica in the phyllosphere and in the chicken intestine may underlie the differential contribution of AI-2 synthesis to the fitness of S. enterica in these environments.

  14. Effect of the surfactant tween 80 on the detachment and dispersal of Salmonella enterica serovar Thompson single cells and aggregates from cilantro leaves as revealed by image analysis.

    PubMed

    Brandl, Maria T; Huynh, Steven

    2014-08-01

    Salmonella enterica has the ability to form biofilms and large aggregates on produce surfaces, including on cilantro leaves. Aggregates of S. enterica serovar Thompson that remained attached to cilantro leaves after rigorous washing and that were present free or bound to dislodged leaf tissue in the wash suspension were observed by confocal microscopy. Measurement of S. Thompson population sizes in the leaf washes by plate counts failed to show an effect of 0.05% Tween 80 on the removal of the pathogen from cilantro leaves 2 and 6 days after inoculation. On the contrary, digital image analysis of micrographs of single cells and aggregates of green fluorescent protein (GFP)-S. Thompson present in cilantro leaf washes revealed that single cells represented 13.7% of the cell assemblages in leaf washes containing Tween 80, versus 9.3% in those without the surfactant. Moreover, Tween 80 decreased the percentage of the total S. Thompson cell population located in aggregates equal to or larger than 64 cells from 9.8% to 4.4% (P < 0.05). Regression analysis of the frequency distribution of aggregate size in leaf washes with and without Tween 80 showed that the surfactant promoted the dispersal of cells from large aggregates into smaller ones and into single cells (P < 0.05). Our study underlines the importance of investigating bacterial behavior at the scale of single cells in order to uncover trends undetectable at the population level by bacterial plate counts. Such an approach may provide valuable information to devise strategies aimed at enhancing the efficacy of produce sanitization treatments.

  15. Flood-inundation maps for the East Fork White River near Bedford, Indiana

    USGS Publications Warehouse

    Fowler, Kathleen K.

    2014-01-01

    Digital flood-inundation maps for an 1.8-mile reach of the East Fork White River near Bedford, Indiana (Ind.) were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Department of Transportation. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/ depict estimates of the areal extent and depth of flooding corresponding to selectedwater levels (stages) at USGS streamgage 03371500, East Fork White River near Bedford, Ind. Current conditions for estimating near-real-time areas of inundation using USGS streamgage information may be obtained on the Internet at http://waterdata.usgs.gov/in/nwis/uv?site_no=03371500. In addition, information has been provided to the National Weather Service (NWS) for incorporation into their Advanced Hydrologic Prediction Service (AHPS) flood warning system (http://water.weather.gov/ahps/). The NWS forecasts flood hydrographs at many places that are often colocated with USGS streamgages, including the East Fork White River near Bedford, Ind. NWS-forecasted peak-stage information may be used in conjunction with the maps developed in this study to show predicted areas of flood inundation. For this study, flood profiles were computed for the East Fork White River reach by means of a one-dimensional step-backwater model. The hydraulic model was calibrated by using the most current stage-discharge relations at USGS streamgage 03371500, East Fork White River near Bedford, Ind., and documented high-water marks from the flood of June 2008. The calibrated hydraulic model was then used to determine 20 water-surface profiles for flood stages at 1-foot intervals referenced to the streamgage datum and ranging from bankfull to the highest stage of the current stage-discharge rating curve. The simulated water-surface profiles were then combined with a geographic information system (GIS) digital elevation model (DEM, derived from

  16. Flood-inundation maps for the East Fork White River at Shoals, Indiana

    USGS Publications Warehouse

    Boldt, Justin A.

    2016-05-06

    Digital flood-inundation maps for a 5.9-mile reach of the East Fork White River at Shoals, Indiana (Ind.), were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Office of Community and Rural Affairs. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/ depict estimates of the areal extent and depth of flooding corresponding to selected water levels (stages) at the USGS streamgage on the East Fork White River at Shoals, Ind. (USGS station number 03373500). Near-real-time stages at this streamgage may be obtained on the Internet from the USGS National Water Information System at http://waterdata.usgs.gov/ or the National Weather Service (NWS) Advanced Hydrologic Prediction Service (AHPS) at http://water.weather.gov/ahps/, which also forecasts flood hydrographs at this site (NWS AHPS site SHLI3). NWS AHPS forecast peak stage information may be used in conjunction with the maps developed in this study to show predicted areas of flood inundation.Flood profiles were computed for the East Fork White River reach by means of a one-dimensional, step-backwater model developed by the U.S. Army Corps of Engineers. The hydraulic model was calibrated by using the current stage-discharge relation (USGS rating no. 43.0) at USGS streamgage 03373500, East Fork White River at Shoals, Ind. The calibrated hydraulic model was then used to compute 26 water-surface profiles for flood stages at 1-foot (ft) intervals referenced to the streamgage datum and ranging from approximately bankfull (10 ft) to the highest stage of the current stage-discharge rating curve (35 ft). The simulated water-surface profiles were then combined with a geographic information system (GIS) digital elevation model (DEM), derived from light detection and ranging (lidar) data, to delineate the area flooded at each water level. The areal extent of the 24-ft flood-inundation map was

  17. Replication Terminator Protein-Based Replication Fork-Arrest Systems in Various Bacillus Species

    PubMed Central

    Griffiths, A. A.; Andersen, P. A.; Wake, R. G.

    1998-01-01

    The replication terminator protein (RTP) of Bacillus subtilis interacts with its cognate DNA terminators to cause replication fork arrest, thereby ensuring that the forks approaching one another at the conclusion of a round of replication meet within a restricted terminus region. A similar situation exists in Escherichia coli, but it appears that the fork-arrest systems in these two organisms have evolved independently of one another. In the present work, RTP homologs in four species closely related to B. subtilis (B. atrophaeus, B. amyloliquefaciens, B. mojavensis, and B. vallismortis) have been identified and characterized. An RTP homolog could not be identified in another closely related species, B. licheniformis. The nucleotide and amino acid changes from B. subtilis among the four homologs are consistent with the recently established phylogenetic tree for these species. The GC contents of the rtp genes raise the possibility that these organisms arose within this branch of the tree by horizontal transfer into a common ancestor after their divergence from B. licheniformis. Only 5 amino acid residue positions were changed among the four homologs, despite an up to 17.2% change in the nucleotide sequence, a finding that highlights the importance of the precise folded structure to the functioning of RTP. The absence of any significant change in the proposed DNA-binding region of RTP emphasizes the importance of its high affinity for the DNA terminator in its functioning. By coincidence, the single change (E30K) found in the B. mojavensis RTP corresponds exactly to that purposefully introduced by others into B. subtilis RTP to implicate a crucial role for E30 in the fork-arrest mechanism. The natural occurrence of this variant is difficult to reconcile with such an implication, and it was shown directly that RTP.E30K functions normally in fork arrest in B. subtilis in vivo. Additional DNA terminators were identified in the new RTP homolog-containing strains, allowing

  18. Nucleolytic processing of aberrant replication intermediates by an Exo1-Dna2-Sae2 axis counteracts fork collapse-driven chromosome instability

    PubMed Central

    Colosio, Arianna; Frattini, Camilla; Pellicanò, Grazia; Villa-Hernández, Sara; Bermejo, Rodrigo

    2016-01-01

    Problems during DNA replication underlie genomic instability and drive malignant transformation. The DNA damage checkpoint stabilizes stalled replication forks thus counteracting aberrant fork transitions, DNA breaks and chromosomal rearrangements. We analyzed fork processing in checkpoint deficient cells by coupling psoralen crosslinking with replication intermediate two-dimensional gel analysis. This revealed a novel role for Exo1 nuclease in resecting reversed replication fork structures and counteracting the accumulation of aberrant intermediates resembling fork cleavage products. Genetic analyses demonstrated a functional interplay of Exo1 with Mus81, Dna2 and Sae2 nucleases in promoting cell survival following replication stress, suggestive of concerted nucleolytic processing of stalled forks. While Mus81 and other Structure Specific Endonucleases do not contribute to obvious collapsed fork transitions, Dna2 promotes reversed fork resection likely by facilitating Exo1 access to nascent strands. Instead, Sae2 cooperates with Exo1 in counteracting putative fork cleavage events linked to double strand breaks formation and increased gross chromosomal rearrangement rates. Our data indicate that in checkpoint deficient cells diverse nuclease activities interface to eliminate aberrant replication intermediates and prevent chromosome instability. PMID:27672038

  19. Nucleolytic processing of aberrant replication intermediates by an Exo1-Dna2-Sae2 axis counteracts fork collapse-driven chromosome instability.

    PubMed

    Colosio, Arianna; Frattini, Camilla; Pellicanò, Grazia; Villa-Hernández, Sara; Bermejo, Rodrigo

    2016-12-15

    Problems during DNA replication underlie genomic instability and drive malignant transformation. The DNA damage checkpoint stabilizes stalled replication forks thus counteracting aberrant fork transitions, DNA breaks and chromosomal rearrangements. We analyzed fork processing in checkpoint deficient cells by coupling psoralen crosslinking with replication intermediate two-dimensional gel analysis. This revealed a novel role for Exo1 nuclease in resecting reversed replication fork structures and counteracting the accumulation of aberrant intermediates resembling fork cleavage products. Genetic analyses demonstrated a functional interplay of Exo1 with Mus81, Dna2 and Sae2 nucleases in promoting cell survival following replication stress, suggestive of concerted nucleolytic processing of stalled forks. While Mus81 and other Structure Specific Endonucleases do not contribute to obvious collapsed fork transitions, Dna2 promotes reversed fork resection likely by facilitating Exo1 access to nascent strands. Instead, Sae2 cooperates with Exo1 in counteracting putative fork cleavage events linked to double strand breaks formation and increased gross chromosomal rearrangement rates. Our data indicate that in checkpoint deficient cells diverse nuclease activities interface to eliminate aberrant replication intermediates and prevent chromosome instability.

  20. Effects of controlled burning of chaparral on streamflow and sediment characteristics, East Fork Sycamore Creek, central Arizona

    USGS Publications Warehouse

    Baldys, Stanley; Hjalmarson, H.W.

    1994-01-01

    The effects of controlled burning of part of a chaparral-covered drainage basin on streamflow and sediment characteristics were studied in the upper reaches of the Sycamore Creek basin in central Arizona. A paired-watershed method was used to analyze data collected in two phases separated by the controlled burning of 45 percent of the East Fork Sycamore Creek drainage basin by the U.S. Forest Service on October 31, 1981. Statistically significant increases in streamflow in East Fork occurred from October 26, 1982, through August 25, 1984. Streamflow for August 26, 1984, through the end of data collection for the study on May 31, 1986, was generally at or less than preburn levels. An increase in the percentage of time that flow occurred in East Fork was noted for water years 1983 and 1984. No increase in the magnitude of instantaneous peak flows as a result of the burn was discernable at statistically significant levels. Suspended-sediment yields computed for data collected during water year 1983 were significantly greater in the East Fork drainage basin, 546 tons per square mile, than in the West Fork drainage basin, 22.6 tons per square mile. Suspended-sediment yields computed for East Fork and West Fork for water year 1985, 38.3 and 13.3 tons per square mile, respectively, were much closer in yield. These more uniform yields indicate a possible return to preburn conditions. Data collection did not begin until 11 months after the burn; therefore, the largest increases in streamflow and sediment yields, which commonly occur during the year after a burn, may not have been measured. During the second through fourth years after the burn, smaller increases in stream- flow and sediment yields were found in this study than were found in similar studies in this region.

  1. THE WERNER AND BLOOM SYNDROME PROTEINS HELP RESOLVE REPLICATION BLOCKAGE BY CONVERTING (REGRESSED) HOLLIDAY JUNCTIONS TO FUNCTIONAL REPLICATION FORKS

    PubMed Central

    Machwe, Amrita; Karale, Rajashree; Xu, Xioahua; Liu, Yilun; Orren, David K.

    2011-01-01

    Cells cope with blockage of replication fork progression in a manner so that DNA synthesis can be completed and genomic instability minimized. Models for resolution of blocked replication involve fork regression to form Holliday junction structures. The human RecQ helicases WRN and BLM (deficient in Werner and Bloom syndromes, respectively) are critical for maintaining genomic stability and postulated to function in accurate resolution of replication blockage. Consistent with this notion, WRN and BLM localize to sites of blocked replication after certain DNA damaging treatments and exhibit enhanced activity on replication and recombination intermediates. Here we examined the actions of WRN and BLM on a special Holliday junction substrate reflective of a regressed replication fork. Our results demonstrate that, in reactions requiring ATP hydrolysis, both WRN and BLM convert this Holliday junction substrate primarily to a four-stranded replication fork structure, suggesting they target the Holliday junction to initiate branch migration. In agreement, the Holliday junction binding protein RuvA inhibits the WRN- and BLM-mediated conversion reactions. Importantly, this conversion product is suitable for replication with its leading daughter strand readily extended by DNA polymerases. Furthermore, binding to and conversion of this Holliday junction is optimal in low MgCl2, suggesting that WRN and BLM preferentially act on the square planar (open) conformation of Holliday junctions. Our findings suggest that, subsequent to fork regression events, WRN and/or BLM could re-establish functional replication forks to help overcome fork blockage. Such a function is highly consistent with phenotypes associated with WRN- and BLM-deficient cells. PMID:21736299

  2. Project: "Project!"

    ERIC Educational Resources Information Center

    Grayson, Katherine

    2007-01-01

    In November 2006, the editors of "Campus Technology" launched their first-ever High-Resolution Projection Study, to find out if the latest in projector technology could really make a significant difference in teaching, learning, and educational innovation on US campuses. The author and her colleagues asked campus educators,…

  3. Environmental Statement for Lavon Dam and Reservoir Modification and East Fork Channel Improvement - Pertaining to East Fork Channel and Levee Improvement Increment I. Supplement.

    DTIC Science & Technology

    1977-01-01

    Fork Channel and Levee Improvement Increment .p I ON0TRACT OR GRANT NUMBER.) US Army Corps of Engineers u l F t W o r t h , T X .... .- - -- 9...the abaract ontered in Blook 20 I dlfforent be- r Report) IS. SUPPLEMENTARY NOTES IS. KEY WORDS (Continue on reovere side It necosary and Idontdir by...0 ’ ’ % I N" ’S S S S S I S I S S S I S I S / S - S S I 5 I S IIN I S / S aeAf"- d"b* mm AR r -kp ’ r do~ -dC -4W% P* ~ qbb IELEVATION IN 360 I (1 It

  4. The Late Cretaceous Middle Fork caldera, its resurgent intrusion, and enduring landscape stability in east-central Alaska

    USGS Publications Warehouse

    Bacon, Charles R.; Dusel-Bacon, Cynthia; Aleinikoff, John N.; Slack, John F.

    2014-01-01

    The Middle Fork is a relatively well preserved caldera within a broad region of Paleozoic metamorphic rocks and Mesozoic plutons bounded by northeast-trending faults. In the relatively downdropped and less deeply exhumed crustal blocks, Cretaceous–Early Tertiary silicic volcanic rocks attest to long-term stability of the landscape. Within the Middle Fork caldera, the granite porphyry is interpreted to have been exposed by erosion of thick intracaldera tuff from an asymmetric resurgent dome. The Middle Fork of the North Fork of the Fortymile River incised an arcuate valley into and around the caldera fill on the west and north and may have cut down from within an original caldera moat. The 70 Ma land surface is preserved beneath proximal outflow tuff at the west margin of the caldera structure and beneath welded outflow tuff 16–23 km east-southeast of the caldera in a paleovalley. Within ∼50 km of the Middle Fork caldera are 14 examples of Late Cretaceous (?)–Tertiary felsic volcanic and hypabyssal intrusive rocks that range in area from <1 km2 to ∼100 km2. Rhyolite dome clusters north and northwest of the caldera occupy tectonic basins associated with northeast-trending faults and are relatively little eroded. Lava of a latite complex, 12–19 km northeast of the caldera, apparently flowed into the paleovalley of the Middle Fork of the North Fork of the Fortymile River. To the northwest of the Middle Fork caldera, in the Mount Harper crustal block, mid-Cretaceous plutonic rocks are widely exposed, indicating greater total exhumation. To the southeast of the Middle Fork block, the Mount Veta block has been uplifted sufficiently to expose a ca. 68–66 Ma equigranular granitic pluton. Farther to the southeast, in the Kechumstuk block, the flat-lying outflow tuff remnant in Gold Creek and a regionally extensive high terrace indicate that the landscape there has been little modified since 70 Ma other than entrenchment of tributaries in response to post–2

  5. Hydrology of the North Fork of the Right Fork of Miller Creek, Carbon County, Utah, before, during, and after underground coal mining

    USGS Publications Warehouse

    Slaughter, C.B.; Freethey, G.W.; Spangler, L.E.

    1995-01-01

    From 1988-92 the U.S. Geological Survey, in cooperation with the Utah Division of Oil, Gas, and Mining, studied the effects of underground coal mining and the resulting subsidence on the hydrologic system near the North Fork of the Right Fork of Miller Creek, Carbon County, Utah. The subsidence caused open fractures at land surface, debris slides, and rockfalls in the canyon above the mined area. Land surface subsided and moved several feet horizontally. The perennial stream and a tributary upstream from the mined area were diverted below the ground by surface fractures where the overburden thickness above the Wattis coal seam is 300 to 500 feet. The reach downstream was dry but flow resumed where the channel traversed the Star Point Sandstone, which forms the aquifer below the coal seams where ground-water discharge provides new base flow. Concentrations of dissolved constituents in the stream water sampled just downstream from the mined area increased from about 300 mg/L (milligrams per liter) to more than 1,500 mg/L, and the water changed from primarily a magnesium calcium bicarbonate to primarily a magnesium sulfate type. Monitored water levels in two wells completed in the perched aquifer(s) above the mine indicate that fractures from subsidence- related deformation drained the perched aquifer in the Blackhawk Formation. The deformation also could have contributed to the decrease in discharge of three springs above the mined area, but discharge from other springs in the area did not change ubstantially; thus, the relation between subsidence and spring discharge, if any, is not clear. No significant changes in the chemical character of water discharging from springs were detected, but the dissolved-solids concentration in water collected from a perched sandstone aquifer overlying the mined coal seams increased during mining activity.

  6. 2008 Wind Energy Projects, Wind Powering America (Poster)

    SciTech Connect

    Not Available

    2009-01-01

    The Wind Powering America program produces a poster at the end of every calendar year that depicts new U.S. wind energy projects. The 2008 poster includes the following projects: Stetson Wind Farm in Maine; Dutch Hill Wind Farm in New York; Grand Ridge Wind Energy Center in Illinois; Hooper Bay, Alaska; Forestburg, South Dakota; Elbow Creek Wind Project in Texas; Glacier Wind Farm in Montana; Wray, Colorado; Smoky Hills Wind Farm in Kansas; Forbes Park Wind Project in Massachusetts; Spanish Fork, Utah; Goodland Wind Farm in Indiana; and the Tatanka Wind Energy Project on the border of North Dakota and South Dakota.

  7. Differential regulation of the anti-crossover and replication fork regression activities of Mph1 by Mte1

    PubMed Central

    Xue, Xiaoyu; Papusha, Alma; Choi, Koyi; Bonner, Jaclyn N.; Kumar, Sandeep; Niu, Hengyao; Kaur, Hardeep; Zheng, Xiao-Feng; Donnianni, Roberto A.; Lu, Lucy; Lichten, Michael; Zhao, Xiaolan; Ira, Grzegorz; Sung, Patrick

    2016-01-01

    We identified Mte1 (Mph1-associated telomere maintenance protein 1) as a multifunctional regulator of Saccharomyces cerevisiae Mph1, a member of the FANCM family of DNA motor proteins important for DNA replication fork repair and crossover suppression during homologous recombination. We show that Mte1 interacts with Mph1 and DNA species that resemble a DNA replication fork and the D loop formed during recombination. Biochemically, Mte1 stimulates Mph1-mediated DNA replication fork regression and branch migration in a model substrate. Consistent with this activity, genetic analysis reveals that Mte1 functions with Mph1 and the associated MHF complex in replication fork repair. Surprisingly, Mte1 antagonizes the D-loop-dissociative activity of Mph1–MHF and exerts a procrossover role in mitotic recombination. We further show that the influence of Mte1 on Mph1 activities requires its binding to Mph1 and DNA. Thus, Mte1 differentially regulates Mph1 activities to achieve distinct outcomes in recombination and replication fork repair. PMID:26966246

  8. Simultaneous binding to the tracking strand, displaced strand and the duplex of a DNA fork enhances unwinding by Dda helicase.

    PubMed

    Aarattuthodiyil, Suja; Byrd, Alicia K; Raney, Kevin D

    2014-10-01

    Interactions between helicases and the tracking strand of a DNA substrate are well-characterized; however, the role of the displaced strand is a less understood characteristic of DNA unwinding. Dda helicase exhibited greater processivity when unwinding a DNA fork compared to a ss/ds DNA junction substrate. The lag phase in the unwinding progress curve was reduced for the forked DNA compared to the ss/ds junction. Fewer kinetic steps were required to unwind the fork compared to the ss/ds junction, suggesting that binding to the fork leads to disruption of the duplex. DNA footprinting confirmed that interaction of Dda with a fork leads to two base pairs being disrupted whereas no disruption of base pairing was observed with the ss/ds junction. Neutralization of the phosphodiester backbone resulted in a DNA-footprinting pattern similar to that observed with the ss/ds junction, consistent with disruption of the interaction between Dda and the displaced strand. Several basic residues in the 1A domain which were previously proposed to bind to the incoming duplex DNA were replaced with alanines, resulting in apparent loss of interaction with the duplex. Taken together, these results suggest that Dda interaction with the tracking strand, displaced strand and duplex coordinates DNA unwinding.

  9. Gas Phase Photoacoustic Sensor at 8.41 mu m Using Quartz Tuning Forks and Amplitude Modulated Quantum Cascade Lasers

    SciTech Connect

    Wojcik, Michael D.; Phillips, Mark C.; Cannon, Bret D.; Taubman, Matthew S.

    2006-10-01

    We demonstrate the performance of a novel long-wave infrared photoacoustic laser absorbance spectrometer for gas-phase species using an amplitude modulated (AM) quantum cascade (QC) laser and a quartz tuning fork microphone. Photoacoustic signal was generated by focusing the output of a Fabry-Perot QC laser operating at 8.41 ?m between the legs of a quartz tuning fork which served as a transducer for the transient acoustic pressure wave. The QC laser was modulated at the resonant frequency of the tuning fork (32.8 kHz) and delivered a modest 5.3 mW at the tuning fork. This spectrometer was calibrated using the infrared absorber Freon-134a by performing a simultaneous absorption measurement using a 35 cm absorption cell. The NEAS of this instrument was determined to be 2 x 10{sup -8} W cm-1 Hz{sup -1/2}. A corresponding theoretical analysis of the instrument sensitivity is presented and is capable of quantitatively reproducing the experimental NEAS, indicating that the fundamental sensitivity of this technique is limited by the noise floor of the tuning fork itself.

  10. Replication fork progression is paused in two large chromosomal zones flanking the DNA replication origin in Escherichia coli.

    PubMed

    Akiyama, Masahiro Tatsumi; Oshima, Taku; Chumsakul, Onuma; Ishikawa, Shu; Maki, Hisaji

    2016-08-01

    Although the speed of nascent DNA synthesis at individual replication forks is relatively uniform in bacterial cells, the dynamics of replication fork progression on the chromosome are hampered by a variety of natural impediments. Genome replication dynamics can be directly measured from an exponentially growing cell population by sequencing newly synthesized DNA strands that were specifically pulse-labeled with the thymidine analogue 5-bromo-2'-deoxyuridine (BrdU). However, a short pulse labeling with BrdU is impracticable for bacteria because of poor incorporation of BrdU into the cells, and thus, the genomewide dynamics of bacterial DNA replication remain undetermined. Using a new thymidine-requiring Escherichia coli strain, eCOMB, and high-throughput sequencing, we succeeded in determining the genomewide replication profile in bacterial cells. We also found that fork progression is paused in two ~200-kb chromosomal zones that flank the replication origin in the growing cells. This origin-proximal obstruction to fork progression was overcome by an increased thymidine concentration in the culture medium and enhanced by inhibition of transcription. These indicate that DNA replication near the origin is sensitive to the impediments to fork progression, namely a scarcity of the DNA precursor deoxythymidine triphosphate and probable conflicts between replication and transcription machineries.

  11. Water-quality trends and constituent-transport analysis for selected sampling sites in the Milltown Reservoir/Clark Fork River Superfund Site in the upper Clark Fork Basin, Montana, water years 1996–2015

    USGS Publications Warehouse

    Sando, Steven K.; Vecchia, Aldo V.

    2016-07-20

    During the extended history of mining in the upper Clark Fork Basin in Montana, large amounts of waste materials enriched with metallic contaminants (cadmium, copper, lead, and zinc) and the metalloid trace element arsenic were generated from mining operations near Butte and milling and smelting operations near Anaconda. Extensive deposition of mining wastes in the Silver Bow Creek and Clark Fork channels and flood plains had substantial effects on water quality. Federal Superfund remediation activities in the upper Clark Fork Basin began in 1983 and have included substantial remediation near Butte and removal of the former Milltown Dam near Missoula. To aid in evaluating the effects of remediation activities on water quality, the U.S. Geological Survey began collecting streamflow and water-quality data in the upper Clark Fork Basin in the 1980s.Trend analysis was done on specific conductance, selected trace elements (arsenic, copper, and zinc), and suspended sediment for seven sampling sites in the Milltown Reservoir/Clark Fork River Superfund Site for water years 1996–2015. The most upstream site included in trend analysis is Silver Bow Creek at Warm Springs, Montana (sampling site 8), and the most downstream site is Clark Fork above Missoula, Montana (sampling site 22), which is just downstream from the former Milltown Dam. Water year is the 12-month period from October 1 through September 30 and is designated by the year in which it ends. Trend analysis was done by using a joint time-series model for concentration and streamflow. To provide temporal resolution of changes in water quality, trend analysis was conducted for four sequential 5-year periods: period 1 (water years 1996–2000), period 2 (water years 2001–5), period 3 (water years 2006–10), and period 4 (water years 2011–15). Because of the substantial effect of the intentional breach of Milltown Dam on March 28, 2008, period 3 was subdivided into period 3A (October 1, 2005–March 27, 2008

  12. In-Field Performance Testing of the Fork Detector for Quantitative Spent Fuel Verification

    SciTech Connect

    Gauld, Ian C.; Hu, Jianwei; De Baere, P.; Vaccaro, S.; Schwalbach, P.; Liljenfeldt, Henrik; Tobin, Stephen

    2015-01-01

    Expanding spent fuel dry storage activities worldwide are increasing demands on safeguards authorities that perform inspections. The European Atomic Energy Community (EURATOM) and the International Atomic Energy Agency (IAEA) require measurements to verify declarations when spent fuel is transferred to difficult-to-access locations, such as dry storage casks and the repositories planned in Finland and Sweden. EURATOM makes routine use of the Fork detector to obtain gross gamma and total neutron measurements during spent fuel inspections. Data analysis is performed by modules in the integrated Review and Analysis Program (iRAP) software, developed jointly by EURATOM and the IAEA. Under the framework of the US Department of Energy–EURATOM cooperation agreement, a module for automated Fork detector data analysis has been developed by Oak Ridge National Laboratory (ORNL) using the ORIGEN code from the SCALE code system and implemented in iRAP. EURATOM and ORNL recently performed measurements on 30 spent fuel assemblies at the Swedish Central Interim Storage Facility for Spent Nuclear Fuel (Clab), operated by the Swedish Nuclear Fuel and Waste Management Company (SKB). The measured assemblies represent a broad range of fuel characteristics. Neutron count rates for 15 measured pressurized water reactor assemblies are predicted with an average relative standard deviation of 4.6%, and gamma signals are predicted on average within 2.6% of the measurement. The 15 measured boiling water reactor assemblies exhibit slightly larger deviations of 5.2% for the gamma signals and 5.7% for the neutron count rates, compared to measurements. These findings suggest that with improved analysis of the measurement data, existing instruments can provide increased verification of operator declarations of the spent fuel and thereby also provide greater ability to confirm integrity of an assembly. These results support the application of the Fork detector as a fully quantitative spent fuel

  13. Human brain factor 1, a new member of the fork head gene family

    SciTech Connect

    Murphy, D.B.; Wiese, S.; Burfeind, P.

    1994-06-01

    Analysis of cDNA clones that cross-hybridized with the fork head domain of the rat HNF-3 gene family revealed 10 cDNAs from human fetal brain and human testis cDNA libraries containing this highly conserved DNA-binding domain. Three of these cDNAs (HFK1, HFK2, and HFK3) were further analyzed. The cDNA HFK1 has a length of 2557 nucleotides and shows strong homology at the nucleotide level (91.2%) to brain factor 1 (BF-1) from rat. The HFK1 cDNA codes for a putative 476 amino acid protein. The homology to BF-1 from rat in the coding region at the amino acid level is 87.5%. The fork head homologous region includes 111 amino acids starting at amino acid 160 and has a 97.5% homology to BF-1. Southern hybridization revealed that HFK1 is highly conserved among mammalian species and possibly birds. Northern analysis with total RNA from human tissues and poly(A)-rich RNA from mouse revealed a 3.2-kb transcript that is present in human and mouse fetal brain and in adult mouse brain. In situ hybridization with sections of mouse embryo and human fetal brain reveals that HFK1 expression is restricted to the neuronal cells in the telencepthalon, with strong expression being observed in the developing dentate gyrus and hippocampus. HFK1 was chromosomally localized by in situ hybridization to 14q12. The cDNA clones HFK2 and HFK3 were analyzed by restriction analysis and sequencing. HFK2 and HFK3 were found to be closely related but different from HFK1. Therefore, it would appear that HFK1, HFK2, HFK3, and BF-1 form a new fork head related subfamily. 33 refs., 6 figs.

  14. Water quality of Fremont Lake and New Fork Lakes, western Wyoming: A progress report

    SciTech Connect

    Peterson, D.A.; Averett, R.C.; Mora, K.L.

    1987-01-01

    Fremont Lake and New Fork Lakes in the New Fork River drainage of western Wyoming were selected for a comprehensive study of hydrologic processes affecting mountain lakes in the Rocky Mountains. Information is needed about lakes in this area to assess their response to existing and planned development. The concerns include regional issues such as acid precipitation from gas-sweetening plants, coal-fired power plants, and smelters, as well as local issues, such as shoreline development and raising outlet control structures. Onsite measurements indicated strong thermal stratification in the lakes during the summer. Isothermal conditions occurred during December 1983 and May 1984. Mean phytoplankton concentrations were less than 5,000 cells/ml, and chlorophyll a concentrations were weakly correlated with phytoplankton concentrations. Zooplankton concentrations were small, less than 6 organisms/L. The numbers of benthic invertebrates/unit area in Fremont Lake were extremely small. The lake waters and inflow and outflow streams were chemically dilute solutions. Mean dissolved-solids concentrations were 13 mg/L in Fremont Lake and 24 mg/L in New Fork Lakes. Calcium and bicarbonate were the predominant ions. Concentrations of phosphorus and nitrogen usually were less than detection limits. Trace-metals concentrations in the lakes were similar to those in precipitation and generally were small. Dissolved organic-carbon concentrations were about 1 mg/L. Concentrations of fulvic and humic acids were relatively large in the inlet of Fremont Lake during the spring. Pine Creek has deposited 800 metric tons of sediment, on an annual average, to the delta of Fremont Lake. Most sediment is deposited during spring runoff. 32 refs., 33 figs., 9 tabs.

  15. Water quality of Fremont Lake and New Fork Lakes, western Wyoming; a progress report

    USGS Publications Warehouse

    Peterson, D.A.; Averett, R.C.; Mora, K.L.

    1987-01-01

    Fremont Lake and New Fork Lakes in the New Fork River drainage of western Wyoming were selected for a comprehensive study of hydrologic processes affecting mountain lakes in the Rocky Mountains. Information is needed about lakes in this area to assess their response to existing and planned development. The concerns include regional issues such as acid precipitation from gas-sweetening plants, coal-fired powerplants, and smelters, as well as local issues, such as shoreline development and raising outlet control structures. Onsite measurements indicated strong thermal stratification in the lakes during the summer. Isothermal conditions occurred during December 1983 and May 1984. Mean phytoplankton concentrations were less than 5,000 cells/ml, and chlorophyll a concentrations were weakly correlated with phytoplankton concentrations. Zooplankton concentrations were small, less than 6 organisms/L. The numbers of benthic invertebrates/unit area in Fremont Lake were extremely small. The lake waters and inflow and outflow streams were chemically dilute solutions. Mean dissolved-solids concentrations were 13 mg/L in Fremont Lake and 24 mg/L in New Fork Lakes. Calcium and bicarbonate were the predominant ions. Concentrations of phosphorus and nitrogen usually were less than detection limits. Trace-metals concentrations in the lakes were similar to those in precipitation and generally were small. Dissolved organic-carbon concentrations were about 1 mg/L. Concentrations of fulvic and humic acids were relatively large in the inlet of Fremont Lake during the spring. Pine Creek has deposited 800 metric tons of sediment, on an annual average, to the delta of Fremont Lake. Most sediment is deposited during spring runoff. (USGS)

  16. South Fork of the Santa Clara River, Santa Clarita Valley, California. Supplement.

    DTIC Science & Technology

    1985-01-01

    designed as a broad - crested weir to pass the maximum probable flood (PF) with a peak of 24,500 ofs. The spillway crest length of 100 feet and the...California or the EPA. The Clean Water Act of 1977 requires a Federal agency to evaluate the effects of discharge of dredged or fill material into waters of...J42 THE EVALUATION OF THE EFFECTS OF THIE DISCHARGE OF DREDGED OR FILL MATERIAL INTO THE WATERS OF THE UNITED STATES SOUTH FORK, SANTA CLARA RIVER LOlS

  17. Hydrogeologic framework of the North Fork and surrounding areas, Long Island, New York

    USGS Publications Warehouse

    Schubert, Christopher E.; Bova, Richard G.; Misut, Paul E.

    2004-01-01

    Ground water on the North Fork of Long Island is the sole source of drinking water, but the supply is vulnerable to saltwater intrusion and upconing in response to heavy pumping. Information on the area's hydrogeologic framework is needed to analyze the effects of pumping and drought on ground-water levels and the position of the freshwater-saltwater interface. This will enable water-resource managers and water-supply purveyors to evaluate a wide range of water-supply scenarios to safely meet water-use demands. The extent and thickness of hydrogeologic units and position of the freshwater-saltwater interface were interpreted from previous work and from exploratory drilling during this study.The fresh ground-water reservoir on the North Fork consists of four principal freshwater flow systems (referred to as Long Island mainland, Cutchogue, Greenport, and Orient) within a sequence of unconsolidated Pleistocene and Late Cretaceous deposits. A thick glacial-lake-clay unit appears to truncate underlying deposits in three buried valleys beneath the northern shore of the North Fork. Similar glacial-lake deposits beneath eastern and east-central Long Island Sound previously were inferred to be younger than the surficial glacial deposits exposed along the northern shore of Long Island. Close similarities in thickness and upper-surface altitude between the glacial-lake-clay unit on the North Fork and the glacial-lake deposits in Long Island Sound indicate, however, that the two are correlated at least along the North Fork shore.The Matawan Group and Magothy Formation, undifferentiated, is the uppermost Cretaceous unit on the North Fork and constitutes the Magothy aquifer. The upper surface of this unit contains a series of prominent erosional features that can be traced beneath Long Island Sound and the North Fork. Northwest-trending buried ridges extend several miles offshore from areas southeast of Rocky Point and Horton Point. A promontory in the irregular, north

  18. Thermoelastic investigation of a quartz tuning fork used in infrared spectroscopy

    SciTech Connect

    Spajer, M. Cavallier, B.; Euphrasie, S.; Matten, G.; Vacheret, X.; Vairac, P.; Vernier, D.; Jalocha, A.

    2013-11-11

    The performances of quartz tuning forks (QTF) used in infrared spectroscopy for pollutant detection are investigated. The transduction between light and QTF vibration is elucidated, thanks to QTF encapsulation under vacuum. From the sensitivity enhancement which is obtained, we conclude that their interaction is photo-thermoelastic rather than photo-thermoacoustic. A mapping of the local sensitivity of the QTF is obtained by scanning its faces with the excitation probe beam. The comparison between the signal mapping and the theoretical strain mapping indicates that the most efficient areas of the QTF correspond to the areas where the strain or stress is the highest.

  19. Photo-thermal quartz tuning fork excitation for dynamic mode atomic force microscope

    SciTech Connect

    Bontempi, Alexia; Teyssieux, Damien; Thiery, Laurent; Hermelin, Damien; Vairac, Pascal; Friedt, Jean-Michel

    2014-10-13

    A photo-thermal excitation of a Quartz Tuning Fork (QTF) for topographic studies is introduced. The non-invasive photo-thermal excitation presents practical advantages compared to QTF mechanical and electrical excitations, including the absence of the anti-resonance and its associated phase rotation. Comparison between our theoretical model and experiments validate that the optical transduction mechanism is a photo-thermal rather than photo-thermoacoustic phenomenon. Topographic maps in the context of near-field microscopy distance control have been achieved to demonstrate the performance of the system.

  20. Autoimmune Pancreatitis Diagnosed with Core Biopsy Obtained from a Novel Fork-Tip EUS Needle

    PubMed Central

    Saini, Sameer D.; Chamberlain, Priscilla R.; Prabhu, Anoop

    2017-01-01

    The endoscopic diagnosis of autoimmune pancreatitis from histologic criteria remains challenging as it requires adequate architectural details rather than cytology alone. A 67-year-old man presented with progressive abdominal pain and weight loss. Cross-sectional imaging showed inflammatory changes of the pancreatic body and tail and periaortitis on abdominal computed tomography, but normal serum immunoglobulin G4. A mass-like lesion of the pancreatic body and tail was identified on endoscopic ultrasonography. A histologic diagnosis of autoimmune pancreatitis was accomplished through needle biopsy using a novel fork-tip needle. PMID:28144612

  1. Hydrogeologic framework of the North Fork and surrounding areas, Long Island, New York

    USGS Publications Warehouse

    Schubert, Christopher E.; Bova, Richard G.; Misut, Paul E.

    2004-01-01

    Ground water on the North Fork of Long Island is the sole source of drinking water, but the supply is vulnerable to saltwater intrusion and upconing in response to heavy pumping. Information on the area?s hydrogeologic framework is needed to analyze the effects of pumping and drought on ground-water levels and the position of the freshwater-saltwater interface. This will enable water-resource managers and water-supply purveyors to evaluate a wide range of water-supply scenarios to safely meet water-use demands. The extent and thickness of hydrogeologic units and position of the freshwater-saltwater interface were interpreted from previous work and from exploratory drilling during this study. The fresh ground-water reservoir on the North Fork consists of four principal freshwater flow systems (referred to as Long Island mainland, Cutchogue, Greenport, and Orient) within a sequence of unconsolidated Pleistocene and Late Cretaceous deposits. A thick glacial-lake-clay unit appears to truncate underlying deposits in three buried valleys beneath the northern shore of the North Fork. Similar glacial-lake deposits beneath eastern and east-central Long Island Sound previously were inferred to be younger than the surficial glacial deposits exposed along the northern shore of Long Island. Close similarities in thickness and upper-surface altitude between the glacial-lake-clay unit on the North Fork and the glacial-lake deposits in Long Island Sound indicate, however, that the two are correlated at least along the North Fork shore. The Matawan Group and Magothy Formation, undifferentiated, is the uppermost Cretaceous unit on the North Fork and constitutes the Magothy aquifer. The upper surface of this unit contains a series of prominent erosional features that can be traced beneath Long Island Sound and the North Fork. Northwest-trending buried ridges extend several miles offshore from areas southeast of Rocky Point and Horton Point. A promontory in the irregular, north

  2. Note: Wide band amplifier for quartz tuning fork sensors with digitally controlled stray capacitance compensation

    NASA Astrophysics Data System (ADS)

    Peng, Ping; Hao, Lifeng; Ding, Ning; Jiao, Weicheng; Wang, Qi; Zhang, Jian; Wang, Rongguo

    2015-11-01

    We presented a preamplifier design for quartz tuning fork (QTF) sensors in which the stray capacitance is digitally compensated. In this design, the manually controlled variable capacitor is replaced by a pair of varicap diodes, whose capacitance could be accurately tuned by a bias voltage. A tuning circuit including a single side low power operational amplifier, a digital-to-analog converter, and a microprocessor is also described, and the tuning process can be conveniently carried out on a personal computer. For the design, the noise level was investigated experimentally.

  3. Integrated Natural Resources Management Plan Grand Forks Air Force Base, North Dakota. 2004-2008

    DTIC Science & Technology

    2005-12-01

    Instruction 32-7064. t.L~~ t .-󈧏 ~~..,c...- I’ CIL- William J. Bender, Colonel, USAF Commander, 319 Air Refueling Wing Grand Forks Air Force Base...Prairie egion US Fish and Wildlife Service PO Box 25486, DFC Denver, CO 80225 Date I 2004·2008 UPDATE FOR INTEGRATED NATURAL RESOURCES...io omv;r<: ~ • -1e conservation and n:’labll! t ?-~~;)𔃻 of r.aturai rr?sources on n::!i~ary installatic:·ls • -~1e sustamable multipurpose use cf

  4. Monitoring the spatiotemporal dynamics of proteins at replication forks and in assembled chromatin using isolation of proteins on nascent DNA.

    PubMed

    Sirbu, Bianca M; Couch, Frank B; Cortez, David

    2012-03-01

    Understanding the processes of DNA replication, chromatin assembly and maturation, and the replication stress response requires the ability to monitor protein dynamics at active and damaged replication forks. Detecting protein accumulation at replication forks or damaged sites has primarily relied on immunofluorescence imaging, which is limited in resolution and antibody sensitivity. Here we describe a procedure to isolate proteins on nascent DNA (iPOND) that permits a high-resolution spatiotemporal analysis of proteins at replication forks or on chromatin following DNA replication in cultured cells. iPOND relies on labeling of nascent DNA with the nucleoside analog 5-ethynyl-2'-deoxyuridine (EdU). Biotin conjugation to EdU-labeled DNA using click chemistry facilitates a single-step streptavidin purification of proteins bound to the nascent DNA. iPOND permits an interrogation of any cellular process linked to DNA synthesis using a 3- to 4-d protocol.

  5. The Influence of Humidity on the Shear Force Between Tip and Sample in Nsom Using Piezoelectric Fork

    NASA Astrophysics Data System (ADS)

    Zhang, Tianhao; Fang, Zheyu; Zheng, Jianya; Gao, Limo; Yang, Haidong; Yin, Meirong; Yang, Jia; Lu, Yanzhen; Kang, Huizhen; Yang, Dapeng; Yang, Huizhan

    The distance between tip and sample can be regulated using piezoelectric quartz fork glued with micro optic fiber probe. A biquadrate vibration equation for the fork-probe-sample system is established to theoretically analyze the relations of the electric current flow through fork versus tip-sample (T-S) distance (I-d). The I-d curve and the action distance for shear force are influenced by environmental humidity. The results reinforce the opinions in the earlier works by other researches that the physical origin of the shear force is due to a material filling the tip-sample gap. Furthermore, the intrinsic reasons for shear force damping between tip and sample have been confirmed and developed, i.e. the water and hydrocarbon coupled between optic fiber probe and sample due to the capillary cohesion force.

  6. Qualitative Assessment: Evaluating the Impacts of Climate Change on Endangered Species Act Recovery Actions for the South Fork Nooksack River, WA

    EPA Science Inventory

    The South Fork Nooksack River (South Fork) is located in northwest Washington State and is home to nine species of Pacific salmon, including Nooksack early Chinook (aka, spring Chinook salmon), an iconic species for the Nooksack Indian Tribe. The quantity of salmon in the South F...

  7. Stream-Sediment Geochemistry in Mining-Impacted Drainages of the Yankee Fork of the Salmon River, Custer County, Idaho

    USGS Publications Warehouse

    Frost, Thomas P.; Box, Stephen E.

    2009-01-01

    This reconnaissance study was undertaken at the request of the USDA Forest Service, Region 4, to assess the geochemistry, in particular the mercury and selenium contents, of mining-impacted sediments in the Yankee Fork of the Salmon River in Custer County Idaho. The Yankee Fork has been the site of hard-rock and placer mining, primarily for gold and silver, starting in the 1880s. Major dredge placer mining from the 1930s to 1950s in the Yankee Fork disturbed about a 10-kilometer reach. Mercury was commonly used in early hard-rock mining and placer operations for amalgamation and recovery of gold. During the late 1970s, feasibility studies were done on cyanide-heap leach recovery of gold from low-grade ores of the Sunbeam and related deposits. In the mid-1990s a major open-pit bulk-vat leach operation was started at the Grouse Creek Mine. This operation shut down when gold values proved to be lower than expected. Mercury in stream sediments in the Yankee Fork ranges from below 0.02 ppm to 7 ppm, with the highest values associated with old mill locations and lode and placer mines. Selenium ranges from below the detection limit for this study of 0.2 ppm to 4 ppm in Yankee Fork sediment samples. The generally elevated selenium content in the sediment samples reflect the generally high selenium contents in the volcanic rocks that underlie the Yankee Fork and the presence of gold and silver selenides in some of the veins that were exploited in the early phases of mining.

  8. Spatial and Temporal influence of Redondo Peak headwaters in the East Fork Jemez River using Principal Component Analysis approach, Valles Caldera, New Mexico

    NASA Astrophysics Data System (ADS)

    Sanchez, Rodrigo; Meixner, Thomas

    2015-04-01

    The Valles Caldera is a volcanic collapse feature located in the Jemez Mountains in northern New Mexico, southwestern United States. This region is characterized by a bimodal precipitation pattern, i.e. spring snowmelt and summer monsoon rains. Two main streams flow through the Valles Caldera: San Antonio and East Fork Jemez. The junction of these two rivers form the Jemez River which is an important contributor to the Rio Grande that supplies water to cities located in southwestern U.S. Redondo Peak is located in the center of the Valles Caldera that has several springs that drain around all sides of the peak with different hydrologic responses. The main catchments (headwaters) identified in Redondo Peak are: La Jara, Upper Jaramillo, History Grove and Upper Redondo. The main questions that are going to be answered in this research are: Do these head waters affect the chemistry in East Fork Jemez river? and if so, how does this influence vary in space and time? A Principal Component Analysis (PCA) was performed using analyzed water samples for water isotopes and major anions and cations. These samples were collected from the flumes located at each catchment in Redondo Peak, and at different locations along the East Fork Jemez. Samples from the most consistent analytes from 2011 to 2013 were used in this present work. A first PCA was performed to assess how different the La Jara catchment is from Upper Redondo, Upper Jaramillo and History Grove based on the geochemistry of each basin. Prior the analysis the data needs to be normalized in order to avoid biasing towards extreme values. Since La Jara is the reference site for this analysis, its mean and standard deviation were used to normalized the data set of the other catchments. In order to simplify this analysis the two first principal components for each catchment were used to do the projections regardless how much of the variability can be explained. However future analyses are going to be performed with those

  9. Kevorkian v. Thompson.

    PubMed

    1997-01-01

    Court Decision: 947 Federal Supplement 1152; 1997 Jan 6 (date of decision). The United States District Court of the Eastern District of Michigan held that a mentally competent patient who is terminally ill or intractably suffering does not have a liberty interest in assisted suicide under the due process clause of the Fourth Amendment and is not denied equal protection under the Fourteenth Amendment. Plaintiff Jack Kevorkian is a physician who advocates the right to die and assisted patients to commit suicide. Plaintiff Janet Good, the former president of the Michigan Hemlock Society, suffers from terminal pancreatic cancer. The plaintiffs claimed that Michigan's statute prohibiting physician-assisted suicide is unconstitutional. The District Court held that there is no cognizable constitutional right to assisted suicide because the right to suicide or assisted suicide is not deeply rooted in the nation's history and traditions, and because the statute does not infringe on any fundamental right or liberty. The court noted a difference between the withdrawal of life support and acts to hasten death by assisted suicide. The court also held that the law against physician-assisted suicide furthered legitimate state interests in denying to physicians "the role of killers of their patients," in regulating circumstances under which life may be ended, and in protecting the vulnerable but viable from "self-interested importuning of third parties."

  10. Anadronous Fish Habitat Enhancement for the Middle Fork and Upper Salmon River, 1988 Annual Report.

    SciTech Connect

    Andrews, John

    1990-01-01

    The wild and natural salmon and steelhead populations in the Middle Fork and Upper Salmon River are at a critical low. Habitat enhancement through decreasing sediment loads, increasing vegetative cover, removing passage barriers, and providing habitat diversity is imperative to the survival of these specially adapted fish, until passage problems over the Columbia River dams are solved. Personnel from the Boise and Sawtooth National Forests completed all construction work planned for 1988. In Bear Valley, 1573 feet of juniper revetment was constructed at eleven sites, cattle were excluded from 1291 feet of streambanks to prevent bank breakdown, and a small ephemeral gully was filled with juniper trees. Work in the Upper Salmon Drainage consisted of constructing nine rock sills/weirs, two rock deflectors, placing riprap along forty feet of streambank, construction of 2.1 miles of fence on private lands, and opening up the original Valley Creek channel to provide spring chinook passage to the upper watershed. A detailed stream survey of anadromous fish habitat covering 72.0 miles of streams in the Middle Fork Sub-basin was completed.

  11. RNA polymerase II contributes to preventing transcription-mediated replication fork stalls.

    PubMed

    Felipe-Abrio, Irene; Lafuente-Barquero, Juan; García-Rubio, María L; Aguilera, Andrés

    2015-01-13

    Transcription is a major contributor to genome instability. A main cause of transcription-associated instability relies on the capacity of transcription to stall replication. However, we know little of the possible role, if any, of the RNA polymerase (RNAP) in this process. Here, we analyzed 4 specific yeast RNAPII mutants that show different phenotypes of genetic instability including hyper-recombination, DNA damage sensitivity and/or a strong dependency on double-strand break repair functions for viability. Three specific alleles of the RNAPII core, rpb1-1, rpb1-S751F and rpb9∆, cause a defect in replication fork progression, compensated for by additional origin firing, as the main action responsible for instability. The transcription elongation defects of rpb1-S751F and rpb9∆ plus our observation that rpb1-1 causes RNAPII retention on chromatin suggest that RNAPII could participate in facilitating fork progression upon a transcription-replication encounter. Our results imply that the RNAPII or ancillary factors actively help prevent transcription-associated genome instability.

  12. Histone H2B mono-ubiquitylation maintains genomic integrity at stalled replication forks

    PubMed Central

    Northam, Matthew R.; Trujillo, Kelly M.

    2016-01-01

    Histone modifications play an important role in regulating access to DNA for transcription, DNA repair and DNA replication. A central player in these events is the mono-ubiquitylation of histone H2B (H2Bub1), which has been shown to regulate nucleosome dynamics. Previously, it was shown that H2Bub1 was important for nucleosome assembly onto nascent DNA at active replication forks. In the absence of H2Bub1, incomplete chromatin structures resulted in several replication defects. Here, we report new evidence, which shows that loss of H2Bub1 contributes to genomic instability in yeast. Specifically, we demonstrate that H2Bub1-deficient yeast accumulate mutations at a high frequency under conditions of replicative stress. This phenotype is due to an aberrant DNA Damage Tolerance (DDT) response upon fork stalling. We show that H2Bub1 normally functions to promote error-free translesion synthesis (TLS) mediated by DNA polymerase eta (Polη). Without H2Bub1, DNA polymerase zeta (Polζ) is responsible for a highly mutagenic alternative mechanism. While H2Bub1 does not appear to regulate other DDT pathways, error-free DDT mechanisms are employed by H2Bub1-deficient cells as another means for survival. However, in these instances, the anti-recombinase, Srs2, is essential to prevent the accumulation of toxic HR intermediates that arise in an unconstrained chromatin environment. PMID:27458205

  13. FANCD2 influences replication fork processes and genome stability in response to clustered DSBs.

    PubMed

    Zhu, Jiayun; Su, Fengtao; Mukherjee, Shibani; Mori, Eiichiro; Hu, Burong; Asaithamby, Aroumougame

    2015-01-01

    Fanconi Anemia (FA) is a cancer predisposition syndrome and the factors defective in FA are involved in DNA replication, DNA damage repair and tumor suppression. Here, we show that FANCD2 is critical for genome stability maintenance in response to high-linear energy transfer (LET) radiation. We found that FANCD2 is monoubiquitinated and recruited to the sites of clustered DNA double-stranded breaks (DSBs) specifically in S/G2 cells after high-LET radiation. Further, FANCD2 facilitated the repair of clustered DSBs in S/G2 cells and proper progression of S-phase. Furthermore, lack of FANCD2 led to a reduced rate of replication fork progression and elevated levels of both replication fork stalling and new origin firing in response to high-LET radiation. Mechanistically, FANCD2 is required for correct recruitment of RPA2 and Rad51 to the sites of clustered DSBs and that is critical for proper processing of clustered DSBs. Significantly, FANCD2-decifient cells exhibited defective chromosome segregation, elevated levels of chromosomal aberrations, and anchorage-independent growth in response to high-LET radiation. These findings establish FANCD2 as a key factor in genome stability maintenance in response to high-LET radiation and as a promising target to improve cancer therapy.

  14. The forked tongue and edge detection in snakes (Crotalus oreganus): an experimental test.

    PubMed

    Parker, M Rockwell; Young, Bruce A; Kardong, Kenneth V

    2008-02-01

    Many stimulus-detection systems are lateralized to allow for simultaneous comparison of paired stimuli. It has been hypothesized that the deeply forked tongue of snakes and some derived lizards functions as a chemical edge detector where cues gathered by each tine are kept separate to provide two points of lateral odor assessment by the central nervous system via vomeronasal input. While following a chemical trail, one time can be on the trail, the other off, and such differential information prompts the snake to turn back to the trail. The authors tested this hypothesis in rattlesnakes within a predatory context by unilaterally severing the vomeronasal nerves. If edge detection is used by snakes during prey trailing, then unilateral denervation should disrupt trailing ability. The authors found no change in the seven separate trailing parameters measured. Therefore, they found no support for the edge detection hypothesis as it applies to prey trailing behavior. Instead, the deeply forked tongue may represent a chemosensory specialization to increase odor-sampling area, with snakes and derived lizards detecting only the concentration of chemical trails.

  15. Reconnaissance of ground-water resources in the North Fork Gunnison River basin, southwestern Colorado

    USGS Publications Warehouse

    Ackerman, D.J.; Brooks, Tom

    1986-01-01

    Aquifers of large areal extent in the North Fork Gunnison River basin are found in the alluvium and bedrock. Alluvial aquifers yielded water with dissolved solids concentrations ranging from 43 to 2,300 mg/L. Dissolved solids concentrations of water samples from the Mesaverde Formation of Late Cretaceous age and the Dakota Sandstone and Burro Canyon Formations of Late and Early Cretaceous age ranged from 56 to 3,200 mg/L. Dissolved solids concentrations of water samples from Mancos Shale ranged from 1,800 to 8,200 mg/L. Most wells in the North Fork Gunnison River basin are at altitudes below 7,500 ft, yield from 2 to 40 gal/min and are completed in alluvial sand and gravel, sandstone , or fractured bedrock. Springs generally are at altitudes above 7,000 ft, discharge from perched water tables at geologic contacts, have calcium magnesium bicarbonate water types, and are much less saline than water from wells. (Author 's abstract)

  16. An investigation of shallow ground-water quality near East Fork Poplar Creek, Oak Ridge, Tennessee

    USGS Publications Warehouse

    Carmichael, J.K.

    1989-01-01

    Alluvial soils of the flood plain of East Fork Poplar Creek in Oak Ridge, Tennessee, are contaminated with mercury and other metals, organic compounds, and radio-nuclides originating from the Y-12 Plant, a nuclear-processing facility located within the U.S. Department of Energy 's Oak Ridge Reservation. Observation wells were installed in the shallow aquifer of the flood plain, and water quality samples were collected to determine if contaminants are present in the shallow groundwater. Groundwater in the shallow aquifer occurs under water-table conditions. Recharge is primarily from precipitation and discharge is to East Fork Poplar Creek. Groundwater levels fluctuate seasonally in response to variations in recharge and evapotranspiration. During extremely dry periods, the water table drops below the base of the shallow aquifer in some flood-plain areas. Contaminants found in water samples from several of the wells in concentrations which equaled or exceeded drinking-water standards established by the U.S. Environmental Protection Agency are antimony, chromium, lead, mercury, selenium, phenols, and strontium-90. Total and dissolved uranium concentrations exceeded the analytical detection limit in nearly 70% of the wells in the flood plain. The results of water quality determinations demonstrate that elevated concentrations of most trace metals (and possibly organic compounds and radionuclides) were caused by contaminated sediments in the samples. The presence of contaminated sediment in samples is suspected to be the result of borehole contamination during well installation. (USGS)

  17. Quartz Tuning Fork Pressure Gauge for High-Pressure Liquid Helium

    NASA Astrophysics Data System (ADS)

    Botimer, J.; Velasco, A.; Taborek, P.

    2017-01-01

    We have measured the quality factor Q and the frequency f of a 32-kHz quartz tuning fork immersed in liquid ^4He between 0.9 and 3.0 K, over pressures ranging from the saturated vapor pressure to ≈ 25 atm. At constant pressure, as a function of temperature, the quality factor and frequency have strong features related to the temperature dependence of the superfluid fraction. At constant temperature, Q depends on the superfluid fraction, while the frequency is a smooth function of pressure. The behavior is explained using a simple hydrodynamic model. The liquid helium viscosity is obtained from measured values of Q, and together with tabulated values of the helium density as a function of pressure and temperature, the frequency shift can be parameterized as a function of temperature and pressure. The observed sensitivity is ≈ 7.8 Hz/atm. The quartz tuning fork provides a compact low power method of measuring the pressure in the bulk liquid.

  18. RNA polymerase II contributes to preventing transcription-mediated replication fork stalls

    PubMed Central

    Felipe-Abrio, Irene; Lafuente-Barquero, Juan; García-Rubio, María L; Aguilera, Andrés

    2015-01-01

    Transcription is a major contributor to genome instability. A main cause of transcription-associated instability relies on the capacity of transcription to stall replication. However, we know little of the possible role, if any, of the RNA polymerase (RNAP) in this process. Here, we analyzed 4 specific yeast RNAPII mutants that show different phenotypes of genetic instability including hyper-recombination, DNA damage sensitivity and/or a strong dependency on double-strand break repair functions for viability. Three specific alleles of the RNAPII core, rpb1-1, rpb1-S751F and rpb9Δ, cause a defect in replication fork progression, compensated for by additional origin firing, as the main action responsible for instability. The transcription elongation defects of rpb1-S751F and rpb9Δ plus our observation that rpb1-1 causes RNAPII retention on chromatin suggest that RNAPII could participate in facilitating fork progression upon a transcription-replication encounter. Our results imply that the RNAPII or ancillary factors actively help prevent transcription-associated genome instability. PMID:25452497

  19. The Oak Ridge Y-12 Plant biological monitoring and abatement program for East Fork Poplar Creek

    SciTech Connect

    Loar, J.M.; Adams, S.M.; Allison, L.J.; Giddings, J.M.; McCarthy, J.F.; Southworth, G.R.; Smith, J.G.; Stewart, A.J.; Springborn Bionomics, Inc., Wareham, MA; Oak Ridge National Lab., TN )

    1989-10-01

    In May 1985, a National Pollutant Discharge Elimination System permit was issued for the Oak Ridge Y-12 Plant, a nuclear weapons components production facility located in Oak Ridge, Tennessee, and operated by Martin Marietta Energy Systems, Inc., for the US Department of Energy. As a condition of the permit, a Biological Monitoring and Abatement Program (BMAP) was developed to demonstrate that the effluent limitations established for the Oak Ridge Y-12 Plant protect the classified uses of the receiving stream (East Fork Poplar Creek), in particular, the growth and propagation of fish and aquatic life, as designated by the Tennessee Department of Health and Environment. A second purpose for the BMAP is to document the ecological effects resulting from implementation of a water pollution control program that will include construction of nine new wastewater treatment facilities over the next 4 years. Because of the complex nature of the effluent discharged to East Fork Poplar Creek and the temporal and spatial variability in the composition of the effluent (i.e., temporal variability related to various pollution abatement measures that will be implemented over the next several years and spatial variability caused by pollutant inputs downstream of the Oak Ridge Y-12 Plant), a comprehensive, integrated approach to biological monitoring was developed for the BMAP. 39 refs., 5 figs., 8 tabs.

  20. Ground motions from the 2002 Au Sable Forks, New York earthquake of M5.0

    NASA Astrophysics Data System (ADS)

    Sonley, E.; Atkinson, G. M.

    2002-12-01

    The moment magnitude (M) 5.0 earthquake that occurred near Au Sable Forks, New York on April 20, 2002 is the first moderate event in eastern North America to be well recorded on modern regional broadband seismographic stations, and is thus important in refining our understanding of source and propagation processes of moderate ENA earthquakes. We analyze the available seismographic recordings to obtain the source spectrum of the Au Sable Forks earthquake, comparing the results obtained using two methods. In the Direct Method, the Fourier spectra of the records from each station are corrected back to the source by using an empirical regional attenuation model for ENA. In the Empirical Green's Function Method, aftershocks are used as empirical Green's Functions to remove path and site effects. Results from these two methods agree closely, and are in agreement with a two-corner source model for ENA. A pronounced sag in the source spectrum at a frequency near 2 Hz is suggestive of significant source complexity. Observed response spectral amplitudes agree well with the predictions of several ground-motion relations for ENA for an event of M 5.0. It is concluded that ground motions from this earthquake were 'typical' for ENA earthquakes of this magnitude.