Private Tutoring in Eastern Europe and Central Asia: Policy Choices and Implications

ERIC Educational Resources Information Center

Silova, Iveta

2010-01-01

Private tutoring has become increasingly visible in Eastern Europe and Central Asia since the collapse of the socialist bloc in the early 1990s. Yet, this unprecedented growth of private tutoring, in its varied forms and arrangements, has remained largely unnoticed by policymakers in the region. Based on the data from the cross-national studies of…

Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins.

PubMed

Varadi, Mihaly; Zsolyomi, Fruzsina; Guharoy, Mainak; Tompa, Peter

2015-01-01

Proteins form large macromolecular assemblies with RNA that govern essential molecular processes. RNA-binding proteins have often been associated with conformational flexibility, yet the extent and functional implications of their intrinsic disorder have never been fully assessed. Here, through large-scale analysis of comprehensive protein sequence and structure datasets we demonstrate the prevalence of intrinsic structural disorder in RNA-binding proteins and domains. We addressed their functionality through a quantitative description of the evolutionary conservation of disordered segments involved in binding, and investigated the structural implications of flexibility in terms of conformational stability and interface formation. We conclude that the functional role of intrinsically disordered protein segments in RNA-binding is two-fold: first, these regions establish extended, conserved electrostatic interfaces with RNAs via induced fit. Second, conformational flexibility enables them to target different RNA partners, providing multi-functionality, while also ensuring specificity. These findings emphasize the functional importance of intrinsically disordered regions in RNA-binding proteins.

Regional medicine use in the Rhine basin and its implication on water quality

NASA Astrophysics Data System (ADS)

Hut, R. W.; Houtman, C. J.; van de Giesen, N. C.; de Jong, S. A. P.

2012-04-01

Do Germans use more painkillers than the French? Pharmaceuticals used in our Western society form an important group of contaminants found in the river Rhine. As this river is the drinking water source for millions of Europeans, methods to investigate relations between drug use and their penetration in the watercycle are of great importance. An analysis is presented relating medicine residue in the river Rhine to the number of people living in its watershed. An extensive measuring campaign was carried out, sampling river Rhine at 42 locations from its source to the start of its delta (Dutch-German border). The samples were analyzed for 40 common pharmaceuticals. Using discharge data, digital elevation models and demographic data from Eurostat, the relation between total load of drug residue and population was analyzed. Results show regional differences in drug use as well as implications for (down)stream water quality concerning contamination with pharmaceuticals.

2-D Structure of the A Region of Xist RNA and Its Implication for PRC2 Association

PubMed Central

Maenner, Sylvain; Blaud, Magali; Fouillen, Laetitia; Savoye, Anne; Marchand, Virginie; Dubois, Agnès; Sanglier-Cianférani, Sarah; Van Dorsselaer, Alain; Clerc, Philippe; Avner, Philip; Visvikis, Athanase; Branlant, Christiane

2010-01-01

In placental mammals, inactivation of one of the X chromosomes in female cells ensures sex chromosome dosage compensation. The 17 kb non-coding Xist RNA is crucial to this process and accumulates on the future inactive X chromosome. The most conserved Xist RNA region, the A region, contains eight or nine repeats separated by U-rich spacers. It is implicated in the recruitment of late inactivated X genes to the silencing compartment and likely in the recruitment of complex PRC2. Little is known about the structure of the A region and more generally about Xist RNA structure. Knowledge of its structure is restricted to an NMR study of a single A repeat element. Our study is the first experimental analysis of the structure of the entire A region in solution. By the use of chemical and enzymatic probes and FRET experiments, using oligonucleotides carrying fluorescent dyes, we resolved problems linked to sequence redundancies and established a 2-D structure for the A region that contains two long stem-loop structures each including four repeats. Interactions formed between repeats and between repeats and spacers stabilize these structures. Conservation of the spacer terminal sequences allows formation of such structures in all sequenced Xist RNAs. By combination of RNP affinity chromatography, immunoprecipitation assays, mass spectrometry, and Western blot analysis, we demonstrate that the A region can associate with components of the PRC2 complex in mouse ES cell nuclear extracts. Whilst a single four-repeat motif is able to associate with components of this complex, recruitment of Suz12 is clearly more efficient when the entire A region is present. Our data with their emphasis on the importance of inter-repeat pairing change fundamentally our conception of the 2-D structure of the A region of Xist RNA and support its possible implication in recruitment of the PRC2 complex. PMID:20052282

Physiological regeneration of skin appendages and implications for regenerative medicine

PubMed Central

Chuong, Cheng-Ming; Randall, Valerie A; Widelitz, Randall B.; Wu, Ping; Jiang, Ting-Xin

2013-01-01

The concept of regenerative medicine is relatively new, but animals are well known to remake their hair and feathers regularly by normal regenerative physiological processes. Here we focus on 1) how extra-follicular environments can regulate hair and feather stem cell activities and 2) how different configurations of stem cells can shape organ forms in different body regions to fulfil changing physiological needs. PMID:22505663

Pre-Columbian urbanism, anthropogenic landscapes, and the future of the Amazon.

PubMed

Heckenberger, Michael J; Russell, J Christian; Fausto, Carlos; Toney, Joshua R; Schmidt, Morgan J; Pereira, Edithe; Franchetto, Bruna; Kuikuro, Afukaka

2008-08-29

The archaeology of pre-Columbian polities in the Amazon River basin forces a reconsideration of early urbanism and long-term change in tropical forest landscapes. We describe settlement and land-use patterns of complex societies on the eve of European contact (after 1492) in the Upper Xingu region of the Brazilian Amazon. These societies were organized in articulated clusters, representing small independent polities, within a regional peer polity. These patterns constitute a "galactic" form of prehistoric urbanism, sharing features with small-scale urban polities in other areas. Understanding long-term change in coupled human-environment systems relating to these societies has implications for conservation and sustainable development, notably to control ecological degradation and maintain regional biodiversity.

Expanded Craters on Mars: Implications for Shallow, Mid-latitude Excess Ice

NASA Astrophysics Data System (ADS)

Viola, Donna

Understanding the age and distribution of shallow ice on Mars is valuable for interpreting past and present climate conditions, and has implications on habitability and future in situ resource utilization. Many ice-related features, such as lobate debris aprons and concentric crater fill, have been studied using a range of remote sensing techniques. Here, I explore the distribution of expanded craters, a form of sublimation thermokarst where shallow, excess ice has been destabilized and sublimated following an impact event. This leads to the collapse of the overlying dry regolith to produce the appearance of diameter widening. The modern presence of these features suggests that excess ice has remained preserved in the terrain immediately surrounding the craters since the time of their formation in order to maintain the surface. High-resolution imagery is ideal for observing thermokarst features, and much of the work described here will utilize data from the Context Camera (CTX) and High Resolution Imaging Science Experiment (HiRISE) on the Mars Reconnaissance Orbiter (MRO). Expanded craters tend to be found in clusters that emanate radially from at least four primary craters in Arcadia Planitia, and are interpreted as secondary craters that formed nearly simultaneously with their primaries. Crater age dates of the primaries indicate that the expanded secondaries, as well as the ice layer into which they impacted, must be at least tens of millions of years old. Older double-layer ejecta craters in Arcadia Planitia commonly have expanded craters superposed on their ejecta - and they tend to be more expanded (with larger diameters) in the inner ejecta layer. This has implications on the formation mechanisms for craters with this unique ejecta morphology. Finally, I explore the distribution of expanded craters south of Arcadia Planitia and across the southern mid-latitudes, along with scalloped depressions (another form of sublimation thermokarst), in order to identify the modern excess ice boundary in this region and any longitudinal variations. This study identifies some potential low-latitude locations with patchy excess ice, possibly preserved during a past climate. Through these studies, I will infer regions that contain abundant ice today and consider the implications that this ice has on both the martian climate and future exploration.

Crystal Structures of T Cell Receptor (Beta) Chains Related to Rheumatoid Arthritis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li,H.; van Vranken, S.; Zhao, Y.

The crystal structures of the V{beta}17+ {beta} chains of two human T cell receptors (TCRs), originally derived from the synovial fluid (SF4) and tissue (C5-1) of a patient with rheumatoid arthritis (RA), have been determined in native (SF4) and mutant (C5-1{sub F104{yields}Y/C187{yields}S}) forms, respectively. These TCR {beta} chains form homo-dimers in solution and in crystals. Structural comparison reveals that the main-chain conformations in the CDR regions of the C5-1 and SF4 V{beta}17 closely resemble those of a V{beta}17 JM22 in a bound form; however, the CDR3 region shows different conformations among these three V{beta}17 structures. At the side-chain level, conformationalmore » differences were observed at the CDR2 regions between our two ligand-free forms and the bound JM22 form. Other significant differences were observed at the V{beta} regions 8-12, 40-44, and 82-88 between C5-1/SF4 and JM22 V{beta}17, implying that there is considerable variability in the structures of very similar {beta} chains. Structural alignments also reveal a considerable variation in the V{beta}-C{beta} associations, and this may affect ligand recognition. The crystal structures also provide insights into the structure basis of T cell recognition of Mycoplasma arthritidis mitogen (MAM), a superantigen that may be implicated in the development of human RA. Structural comparisons of the V{beta} domains of known TCR structures indicate that there are significant similarities among V{beta} regions that are MAM-reactive, whereas there appear to be significant structural differences among those V{beta} regions that lack MAM-reactivity. It further reveals that CDR2 and framework region (FR) 3 are likely to account for the binding of TCR to MAM.« less

INTER- AND INTRA-CLUSTER AGE GRADIENTS IN MASSIVE STAR FORMING REGIONS AND INDIVIDUAL NEARBY STELLAR CLUSTERS REVEALED BY MYStIX

NASA Astrophysics Data System (ADS)

Getman, Konstantin V.; Feigelson, Eric; Kuhn, Michael A.; Broos, Patrick S; Townsley, Leisa K.; Naylor, Tim; Povich, Matthew S.; Luhman, Kevin; Garmire, Gordon

2014-08-01

The MYStIX (Massive Young Star-Forming Complex Study in Infrared and X-ray) project seeks to characterize 20 OB-dominated young star forming regions (SFRs) at distances <4 kpc using photometric catalogs from the Chandra X-ray Observatory, Spitzer Space Telescope, UKIRT and 2MASS surveys. As part of the MYStIX project, we developed a new stellar chronometer that employs near-infrared and X-ray photometry data, AgeJX. Computing AgeJX averaged over MYStIX (sub)clusters reveals previously unknown age gradients across most of the MYStIX regions as well as within some individual rich clusters. Within the SFRs, the inferred AgeJX ages are youngest in obscured locations in molecular clouds, intermediate in revealed stellar clusters, and oldest in distributed stellar populations. Noticeable intra-cluster gradients are seen in the NGC 2024 (Flame Nebula) star cluster and the Orion Nebula Cluster (ONC): stars in cluster cores appear younger and thus were formed later than stars in cluster halos. The latter result has two important implications for the formation of young stellar clusters. Clusters likely form slowly: they do not arise from a single nearly-instantaneous burst of star formation. The simple models where clusters form inside-out are likely incorrect, and more complex models are needed. We provide several star formation scenarios that alone or in combination may lead to the observed core-halo age gradients.

Could Mars be dark and altered?

USGS Publications Warehouse

Calvin, Wendy M.

1998-01-01

There is a long known dichotomy in the martian albedo, with an associated, but mostly assumed, mineralogical split as well. The bright red regions are inferred to be weathered, oxidized dust and the dark grey regions unaltered volcanic material. A number of recent analyses suggest this division is unnaturally simplistic and the association of many dark regions with the former presence of water requires a re‐examination of the spectra in light of potential alteration minerals. I present an alternate interpretation of the reflectance spectral characteristics of some dark regions on Mars that includes dark layer silicates. If their presence is confirmed on Mars this will have implications for sequestration of current and past volatile inventories, clues to the extent and type of geochemical weathering, and potential zones where bacterial life forms may have emerged.

Unfolding the Future of the Long War: Motivations, Prospects, and Implications for the U.S. Army

DTIC Science & Technology

2008-01-01

chauvinism for its legitimacy. State-Centric State-Centric aims to spread effective governance throughout the Muslim world by strengthening...involvement in the region during times of sectarian violence would challenge IO capabilities to aid in discrediting arguments and propaganda of...quent extensions of the framework to other potential interpretations, have formed the bases for arguments both in support of and against the

Searching the Sinus Amoris: Using profiles of geological units, impact and volcanic features to characterize a major terrane interface on the Moon

NASA Technical Reports Server (NTRS)

Clark, P.; Joerg, S.; Dehon, R.

1994-01-01

Geochemical profiles of surface units, impact, and volcanic features are studied in detail to determine the underlying structure in an area of extensive mare/highland interface, Sinus Amoris. This study region includes and surrounds the northeastern embayment of Mare Tranquillitatis. The concentrations of two major rock-forming elements (Mg and Al), which were derived from the Apollo 15 orbital geochemical measurements, were used in this study. Mapped units and deposits associated with craters in the northwestern part of the region tend to have correlated low Mg and Al concentrations, indicating the presence of Potassium (K)-Rare Earth Elements (REE)-Phosphorus (P) (KREEP)-enriched basalt. Found along the northeastern rim of Tranquillitatis were areas with correlated high Mg and Al concentration, indicating the presence of troctolite. Distinctive west/east and north/south trends were observed in the concentrations of Mg and Al, and, by implication, in the distribution of major rock components on the surface. Evidence for a systematic geochemical transition in highland or basin-forming units may be observed here in the form of distinctive differences in chemistry in otherwise similar units in the western and eastern portions of the study region.

Beneath it all: bedrock geology of the Catskill Mountains and implications of its weathering.

PubMed

Ver Straeten, Charles A

2013-09-01

The Devonian-age bedrock of the Catskill Mountains has been the focus of many studies. This paper reviews the character and composition of the rocks of the Catskills, and examines weathering (rock decay) processes and their implications in the Catskills. Rocks of the Catskills and closest foothills consist of siliciclastic rocks (sandstones, mudrocks, conglomerates) with minimal, locally dispersed carbonate rocks. The former are dominated by quartz, metamorphic and sedimentary rock fragments, and clay minerals. Other minor sediment components include cements, authigenic and heavy minerals, and fossil organic matter. Physical, chemical, and biological weathering of the Catskill bedrock since uplift of the Appalachian region, combined with glaciation, have dissected a plateau of nearly horizontally layered rocks into a series of ridges, valleys, and peaks. The varied weathering processes, in conjunction with many factors (natural and anthropogenic), fragment the rocks, forming sediment and releasing various elements and compounds. These may have positive, neutral, or negative implications for the region's soils, waters, ecology, and human usage. A new generation of studies and analyses of the Catskill bedrock is needed to help answer a broad set of questions and problems across various fields of interest. © 2013 New York Academy of Sciences.

Hills and Valleys: Understanding the Under-Eye

PubMed Central

Naik, Milind N

2016-01-01

Soft tissue deflation and descent have long been implicated in the pathogenesis of facial aging. In the periorbital area, the upper orbital region is thought to change by descent of the eyebrow, as well as deflation of brow fat. While the understanding of the aging changes in the upper eyelid region are relatively simple, the lower eyelid poses a myriad of aging changes, each demanding a specific management plan. These can be best described in terms of elevations, or ‘Hills’ and hollows, or ‘Valleys’. This article simplifies the understanding of the lower eyelid in the light of anatomical knowledge, and available literature. It forms a basis of easy diagnosis and treatment of the soft tissue changes in the lower eyelid and malar region. PMID:27398004

Holocene sediment distribution on the inner continental shelf of northeastern South Carolina: implications for the regional sediment budget and long-term shoreline response

USGS Publications Warehouse

Denny, Jane F.; Schwab, William C.; Baldwin, Wayne E.; Barnhardt, Walter A.; Gayes, Paul T.; Morton, R.A.; Warner, John C.; Driscoll, Neal W.; Voulgaris, George

2013-01-01

High-resolution geophysical and sediment sampling surveys were conducted offshore of the Grand Strand, South Carolina to define the shallow geologic framework of the inner shelf. Results are used to identify and map Holocene sediment deposits, infer sediment transport pathways, and discuss implications for the regional coastal sediment budget. The thickest deposits of Holocene sediment observed on the inner shelf form shoal complexes composed of moderately sorted fine sand, which are primarily located offshore of modern tidal inlets. These shoal deposits contain ~67 M m3 of sediment, approximately 96% of Holocene sediment stored on the inner shelf. Due to the lack of any significant modern fluvial input of sand to the region, the Holocene deposits are likely derived from reworking of relict Pleistocene and older inner-shelf deposits during the Holocene marine transgression. The Holocene sediments are concentrated in the southern part of the study area, due to a combination of ancestral drainage patterns, a regional shift in sediment supply from the northeast to the southwest in the late Pleistocene, and proximity to modern inlet systems. Where sediment is limited, only small, low relief ridges have formed and Pleistocene and older deposits are exposed on the seafloor. The low-relief ridges are likely the result of a thin, mobile veneer of sediment being transported across an irregular, erosional surface formed during the last transgression. Sediment textural trends and seafloor morphology indicate a long-term net transport of sediment to the southwest. This is supported by oceanographic studies that suggest the long-term sediment transport direction is controlled by the frequency and intensity of storms that pass through the region, where low pressure systems yield net along-shore flow to the southwest and a weak onshore component. Current sediment budget estimates for the Grand Strand yield a deficit for the region. Volume calculations of Holocene deposits on the inner shelf suggest that there is sufficient sediment to balance the sediment budget and provide a source of sediment to the shoreline. Although the processes controlling cross-shelf sediment transport are not fully understood, in sediment-limited environments such as the Grand Strand, erosion of the inner shelf likely contributes significant sediment to the beach system.

The role of maxillofacial radiologists in gunshot injuries: a hypothesized missile trajectory in two case reports

PubMed Central

Sansare, K; Khanna, V; Karjodkar, F

2011-01-01

Gunshot injuries are an emerging form of trauma that oral radiologists increasingly have to deal with. There are two main types of gunshot injuries: high-velocity and low-velocity bullet injuries. The outcome of high-velocity gunshot injury is usually fatal; however, a non-fatal low-velocity injury to the maxillofacial region is more likely to be encountered by the oral and maxillofacial radiologist. It is therefore important to up-to-date knowledge of ballistic science and its implications in the field of maxillofacial radiology. The ability of oral and maxillofacial radiologists to predict the missile trajectory will aid the assessment and localization of the damage caused by the bullet and its splinters. Predicting the missile trajectory may also be of help to law enforcement agencies and forensic scientists in determining the type of firearm used and direction of fire. This article, which examines two cases, attempts to highlight to the oral radiologist this emerging form of trauma and its implications. PMID:21159916

The role of maxillofacial radiologists in gunshot injuries: a hypothesized missile trajectory in two case reports.

PubMed

Sansare, K; Khanna, V; Karjodkar, F

2011-01-01

Gunshot injuries are an emerging form of trauma that oral radiologists increasingly have to deal with. There are two main types of gunshot injuries: high-velocity and low-velocity bullet injuries. The outcome of high-velocity gunshot injury is usually fatal; however, a non-fatal low-velocity injury to the maxillofacial region is more likely to be encountered by the oral and maxillofacial radiologist. It is therefore important to up-to-date knowledge of ballistic science and its implications in the field of maxillofacial radiology. The ability of oral and maxillofacial radiologists to predict the missile trajectory will aid the assessment and localization of the damage caused by the bullet and its splinters. Predicting the missile trajectory may also be of help to law enforcement agencies and forensic scientists in determining the type of firearm used and direction of fire. This article, which examines two cases, attempts to highlight to the oral radiologist this emerging form of trauma and its implications.

Brazil on the Rise: Implications on U.S. Policies

DTIC Science & Technology

2012-04-01

Brazilian Joint Counternarcotics Opportunity………….6 U.S. Efforts in Bolivia Brazil Fills the U.S. Counternarcotics Gap in Bolivia Future for...efforts Brazil has undertaken with Bolivia, one can see how a multilateral effort in the region yields better results to address the situation...form of Brazil. Brazil Fills the U.S. Counternarcotics Gap in Bolivia In 1998 there was reportedly little to no narcotics transiting Brazil, and

Properties of Minor Ions in the Solar Wind and Implications for the Background Solar Wind Plasma

NASA Technical Reports Server (NTRS)

Wagner, William (Technical Monitor); Esser, Ruth

2004-01-01

The scope of the investigation is to extract information on the properties of the bulk solar wind from the minor ion observations that are provided by instruments on board NASA space craft and theoretical model studies. Ion charge states measured in situ in interplanetary space are formed in the inner coronal regions below 5 solar radii, hence they carry information on the properties of the solar wind plasma in that region. The plasma parameters that are important in the ion forming processes are the electron density, the electron temperature and the flow speeds of the individual ion species. In addition, if the electron distribution function deviates from a Maxwellian already in the inner corona, then the enhanced tail of that distribution function, also called halo, greatly effects the ion composition. This study is carried out using solar wind models, coronal observations, and ion calculations in conjunction with the in situ observations.

The Volatile Fraction of Comets as Quantified at Infrared Wavelengths - An Emerging Taxonomy and Implications for Natal Heritage

NASA Technical Reports Server (NTRS)

Mumma, M. J.; DiSanti, M. A.; Bonev, B. P.; Villanueva, G. L.; Magee-Sauer, K.; Gibb, E. L.; Paganini, L.; Radeva, Y. L.; Charnley, S. B.

2012-01-01

It is relatively easy to identify the reservoir from which a given comet was ejected. But dynamical models demonstrate that the main cometary reservoirs (Kuiper Belt, Oort Cloud) each contain icy bodies that formed in a range of environments in the protoplanetary disk, and the Oort Cloud may even contain bodies that formed in disks of sibling stars in the Sun s birth cluster. The cometary nucleus contains clues to the formative region(s) of its individual components. The composition of ices and rocky grains reflect a range of processes experienced by material while on the journey from the natal interstellar cloud core to the cometary nucleus. For that reason, emphasis is placed on classifying comets according to their native ices and dust (rather than orbital dynamics). Mumma & Charnley [1] reviewed the current status of taxonomies for comets and relation to their natal heritage.

Hydrodynamics with strength: scaling-invariant solutions for elastic-plastic cavity expansion models

NASA Astrophysics Data System (ADS)

Albright, Jason; Ramsey, Scott; Baty, Roy

2017-11-01

Spherical cavity expansion (SCE) models are used to describe idealized detonation and high-velocity impact in a variety of materials. The common theme in SCE models is the presence of a pressure-driven cavity or void within a domain comprised of plastic and elastic response sub-regions. In past work, the yield criterion characterizing material strength in the plastic sub-region is usually taken for granted and assumed to take a known functional form restrictive to certain classes of materials, e.g. ductile metals or brittle geologic materials. Our objective is to systematically determine a general functional form for the yield criterion under the additional requirement that the SCE admits a similarity solution. Solutions determined under this additional requirement have immediate implications toward development of new compressible flow algorithm verification test problems. However, more importantly, these results also provide novel insight into modeling the yield criteria from the perspective of hydrodynamic scaling.

Round window chamber and fustis: endoscopic anatomy and surgical implications.

PubMed

Marchioni, Daniele; Soloperto, Davide; Colleselli, Elena; Tatti, Maria Fatima; Patel, Nirmal; Jufas, Nicholas

2016-11-01

The round window region is of critical importance in the anatomy of the middle ear. The aim of this paper is to describe its anatomy from an endoscopic point of view, emphasizing structures that have important surgical implications, in particular the fustis and the subcochlear canaliculus. The fustis, a smooth bony structure that forms the floor of the round window region, is a constant and important structure. It seems to indicate the round window membrane and the correct position of scala tympani. A structure connecting the round window region to the petrous apex, named the subcochlear canaliculus, is also described. A retrospective review of video recordings of endoscopic dissection and surgical procedures, carried out between June 2014 and February 2015, was conducted across two Tertiary university referral centers. A total of 42 dissections were analyzed in the study. We observed the fustis in all the cases and we identify two different anatomical conformations. The subcochlear canaliculus was found in 81.0 %, with a pneumatization direct to the petrous apex in 47.7 %. Conformation and limits of the round window niche may influence the surgical view of the round window membrane. Endoscopic approaches allow a very detailed view, which enables a comprehensive exploration of the round window region. Accurate knowledge of the anatomical relationships of this region has important advantages during middle ear surgery.

Hydrogeology of an ancient arid closed basin: implications for tabular sandstone-hosted uranium deposits

USGS Publications Warehouse

Sanford, R.F.

1990-01-01

Hydrogeologic modeling shows that tabular-type uranium deposits in the Grants uranium region of the San Juan basin, New Mexico, formed in zones of ascending and discharging regional ground-water flow. The association of either lacustrine mudstone or actively subsiding structures and uranium deposits can best be explained by the occurrence of lakes at topographic depressions where ground water having different sources and compositions is likely to converge, mix, and discharge. Ascending and discharging flow also explains the association of uranium deposits with underlying evaporites and suggests a brine interface. The simulations contradict previous suggestions that ground water moved downward in the mudflat. -Author

Neighborhood Variation of Sustainable Urban Morphological Characteristics.

PubMed

Lai, Poh-Chin; Chen, Si; Low, Chien-Tat; Cerin, Ester; Stimson, Robert; Wong, Pui Yun Paulina

2018-03-07

Compact cities and their urban forms have implications on sustainable city development because of high density urban settlement, increased accessibility, and a balanced land use mix. This paper uses quantitative means of understanding urban morphological characteristics with reference to the differing qualities of the urban form (i.e., street patterns, building volumes, land uses and greenery). The results, based on 89 neighborhood communities of Hong Kong, show varying degrees of regional differences in the urban built form supported by numerical statistics and graphical illustrations. This paper offers empirical evidence on some morphological characteristics that can be estimated objectively using modern geospatial technologies and applied universally to inform urban planning. However, more studies linking these quantifiable measures of the physical form with sustainable urban living are needed to account for human comfort in the totality of environmental, social, and economic responsibilities.

Neighborhood Variation of Sustainable Urban Morphological Characteristics

PubMed Central

Chen, Si; Stimson, Robert

2018-01-01

Compact cities and their urban forms have implications on sustainable city development because of high density urban settlement, increased accessibility, and a balanced land use mix. This paper uses quantitative means of understanding urban morphological characteristics with reference to the differing qualities of the urban form (i.e., street patterns, building volumes, land uses and greenery). The results, based on 89 neighborhood communities of Hong Kong, show varying degrees of regional differences in the urban built form supported by numerical statistics and graphical illustrations. This paper offers empirical evidence on some morphological characteristics that can be estimated objectively using modern geospatial technologies and applied universally to inform urban planning. However, more studies linking these quantifiable measures of the physical form with sustainable urban living are needed to account for human comfort in the totality of environmental, social, and economic responsibilities. PMID:29518956

MYStIX: Dynamical evolution of young clusters

NASA Astrophysics Data System (ADS)

Kuhn, Michael A.

2014-08-01

The spatial structure of young stellar clusters in Galactic star-forming regions provides insight into these clusters’ dynamical evolution---a topic with implications for open questions in star-formation and cluster survival. The Massive Young Star-Forming Complex Study in Infrared and X-ray (MYStIX) provides a sample of >30,000 young stars in star-forming regions (d<3.6 kpc) that contain at least one O-type star. We use the finite mixture model analysis to identify subclusters of stars and determine their properties: including subcluster radii, intrinsic numbers of stars, central density, ellipticity, obscuration, and age. In 17 MYStIX regions we find 142 subclusters, with a diverse radii and densities and age spreads of up to ~1 Myr in a region. There is a strong negative correlation between subcluster radius and density, which indicates that embedded subclusters expand but also gain stars as they age. Subcluster expansion is also shown by a positive radius--age correlation, which indicates that subclusters are expanding at <1 km/s. The subcluster ellipticity distribution and number--density relation show signs of a hierarchical merger scenario, whereby young stellar clusters are built up through mergers of smaller clumps, causing evolution from a clumpy spatial distribution of stars (seen in some regions) to a simpler distribution of stars (seen in other regions). Many of the simple young stellar clusters show signs of dynamically relaxation, even though they are not old enough for this to have occurred through two-body interactions. However, this apparent contradiction might be explained if small subcluster, which have shorter dynamical relaxation times, can produce dynamically relaxed clusters through hierarchical mergers.

Ventral aspect of the visual form pathway is not critical for the perception of biological motion

PubMed Central

Gilaie-Dotan, Sharon; Saygin, Ayse Pinar; Lorenzi, Lauren J.; Rees, Geraint; Behrmann, Marlene

2015-01-01

Identifying the movements of those around us is fundamental for many daily activities, such as recognizing actions, detecting predators, and interacting with others socially. A key question concerns the neurobiological substrates underlying biological motion perception. Although the ventral “form” visual cortex is standardly activated by biologically moving stimuli, whether these activations are functionally critical for biological motion perception or are epiphenomenal remains unknown. To address this question, we examined whether focal damage to regions of the ventral visual cortex, resulting in significant deficits in form perception, adversely affects biological motion perception. Six patients with damage to the ventral cortex were tested with sensitive point-light display paradigms. All patients were able to recognize unmasked point-light displays and their perceptual thresholds were not significantly different from those of three different control groups, one of which comprised brain-damaged patients with spared ventral cortex (n > 50). Importantly, these six patients performed significantly better than patients with damage to regions critical for biological motion perception. To assess the necessary contribution of different regions in the ventral pathway to biological motion perception, we complement the behavioral findings with a fine-grained comparison between the lesion location and extent, and the cortical regions standardly implicated in biological motion processing. This analysis revealed that the ventral aspects of the form pathway (e.g., fusiform regions, ventral extrastriate body area) are not critical for biological motion perception. We hypothesize that the role of these ventral regions is to provide enhanced multiview/posture representations of the moving person rather than to represent biological motion perception per se. PMID:25583504

Implications of Sino-American Strategic Competition on Southeast Asia’s Post-Cold War Regional Order

DTIC Science & Technology

2003-12-01

NAVAL POSTGRADUATE SCHOOL MONTEREY, CALIFORNIA THESIS IMPLICATIONS OF SINO-AMERICAN STRATEGIC COMPETITION ON SOUTHEAST ASIA’S...Implications of Sino-American Strategic Competition on Southeast Asia’s Post-Cold War Regional Order 5. FUNDING NUMBERS 6. AUTHOR Sidharto R...IMPLICATIONS OF SINO-AMERICAN STRATEGIC COMPETITION ON SOUTHEAST ASIA’S POST-COLD WAR REGIONAL ORDER Sidharto R. Suryodipuro Civilian, Foreign

Implications of SWAS Observations for Interstellar Chemistry and Star Formation

NASA Technical Reports Server (NTRS)

Bergin, Edwin A.; Melnick, Gary J.; Stauffer, John R.; Ashby, Matthew L. N.; Chin, Gordon; Erickson, Neal R.; Goldsmith, Paul F.; Harwit, Martin; Howe, John E.; Kleiner, Steven C.

2000-01-01

A long standing prediction of steady state gas-phase chemical theory is that H2O and O2 are important reservoirs of elemental oxygen and major coolants of the interstellar medium. Analysis of SWAS observations has set sensitive upper limits on the abundance Of O2 and has provided H2O abundances toward a variety of star forming regions. Based on these results, we show that gaseous H2O and O2 are not dominant carriers of elemental oxygen in molecular clouds. Instead the available oxygen is presumably frozen on dust grains in the form of molecular ices, with a significant portion potentially remaining in atomic form, along with CO, in the gas phase. H2O and O2 are also not significant coolants for quiescent molecular gas. In the case of H2O, a number of known chemical processes can locally elevate its abundance in regions with enhanced temperatures, such as warm regions surrounding young stars or in hot shocked gas. Thus, water can be a locally important coolant. The new information provided by SWAS, when combined with recent results from the Infrared Space Observatory, also provide several hard observational constraints for theoretical models of the chemistry in molecular clouds and we discuss various models that satisfy these conditions.

Biopharmaceutical Evaluation and CMC Aspects of Oral Modified Release Formulations.

PubMed

Chang, Rong-Kun; Mathias, Neil; Hussain, Munir A

2017-09-01

This article discusses the range of outcomes from biopharmaceutical studies of specific modified release (MR) product examples in preclinical models and humans. It touches upon five major biopharmaceutical areas for MR drug products: (1) evidence for regional permeability throughout the GI tract, (2) susceptibility to food-effect, (3) susceptibility to pH-effect, (4) impact of chronopharmacology in designing MR products, and (5) implications to narrow therapeutic index products. Robust bioperformance requires that product quality is met through a thorough understanding of the appropriate critical quality attributes that ensure reliable and robust manufacture of a MR dosage form. The quality-by-design (QbD) aspects of MR dosage form design and development are discussed with the emphasis on the regulatory view of the data required to support dosage form development.

Memory retrieval and the parietal cortex: a review of evidence from a dual-process perspective.

PubMed

Vilberg, Kaia L; Rugg, Michael D

2008-01-01

Although regions of the parietal cortex have been consistently implicated in episodic memory retrieval, the functional roles of these regions remain poorly understood. The present review presents a meta-analysis of findings from event-related fMRI studies reporting the loci of retrieval effects associated with familiarity- and recollection-related recognition judgments. The results of this analysis support previous suggestions that retrieval-related activity in lateral parietal cortex dissociates between superior regions, where activity likely reflects the task relevance of different classes of recognition test items, and more inferior regions where retrieval-related activity appears closely linked to successful recollection. It is proposed that inferior lateral parietal cortex forms part of a neural network supporting the 'episodic buffer' [Baddeley, A. D. (2000). The episodic buffer: A new component of working memory? Trends in Cognitive Sciences, 4, 417-423].

Regional variability among nonlinear chlorophyll-phosphorus relationships in lakes

USGS Publications Warehouse

Filstrup, Christopher T.; Wagner, Tyler; Soranno, Patricia A.; Stanley, Emily H.; Stow, Craig A.; Webster, Katherine E.; Downing, John A.

2014-01-01

The relationship between chlorophyll a (Chl a) and total phosphorus (TP) is a fundamental relationship in lakes that reflects multiple aspects of ecosystem function and is also used in the regulation and management of inland waters. The exact form of this relationship has substantial implications on its meaning and its use. We assembled a spatially extensive data set to examine whether nonlinear models are a better fit for Chl a—TP relationships than traditional log-linear models, whether there were regional differences in the form of the relationships, and, if so, which regional factors were related to these differences. We analyzed a data set from 2105 temperate lakes across 35 ecoregions by fitting and comparing two different nonlinear models and one log-linear model. The two nonlinear models fit the data better than the log-linear model. In addition, the parameters for the best-fitting model varied among regions: the maximum and lower Chl aasymptotes were positively and negatively related to percent regional pasture land use, respectively, and the rate at which chlorophyll increased with TP was negatively related to percent regional wetland cover. Lakes in regions with more pasture fields had higher maximum chlorophyll concentrations at high TP concentrations but lower minimum chlorophyll concentrations at low TP concentrations. Lakes in regions with less wetland cover showed a steeper Chl a—TP relationship than wetland-rich regions. Interpretation of Chl a—TP relationships depends on regional differences, and theory and management based on a monolithic relationship may be inaccurate.

Coronal Heating Topology: The Interplay of Current Sheets and Magnetic Field Lines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rappazzo, A. F.; Velli, M.; Matthaeus, W. H.

2017-07-20

The magnetic topology and field line random walk (FLRW) properties of a nanoflare-heated and magnetically confined corona are investigated in the reduced magnetohydrodynamic regime. Field lines originating from current sheets form coherent structures, called current sheet connected (CSC) regions, which extend around them. CSC FLRW is strongly anisotropic, with preferential diffusion along the current sheets’ in-plane length. CSC FLRW properties remain similar to those of the entire ensemble but exhibit enhanced mean square displacements and separations due to the stronger magnetic field intensities in CSC regions. The implications for particle acceleration and heat transport in the solar corona and wind,more » and for solar moss formation are discussed.« less

Katabatic jumps in the Martian northern polar regions

NASA Astrophysics Data System (ADS)

Spiga, Aymeric; Smith, Isaac

2018-07-01

Martian polar regions host active regional wind circulations, such as the downslope katabatic winds which develop owing to near-surface radiative cooling and sloped topography. Many observations (stratigraphy from radar profiling, frost streaks, spectral analysis of ices) concur to show that aeolian processes play a key role in glacial processes in Martian polar regions. A spectacular manifestation of this resides in elongated clouds that forms within the polar spiral troughs, a series of geological depressions in Mars' polar caps. Here we report mesoscale atmospheric modeling in Martian polar regions making use of five nested domains operating a model downscaling from horizontal resolutions of twenty kilometers to 200 m in a typical polar trough. We show that strong katabatic jumps form at the bottom of polar troughs with an horizontal morphology and location similar to trough clouds, large vertical velocity (up to +3 m/s) and temperature perturbations (up to 20 K) propitious to cloud formation. This strongly suggests that trough clouds on Mars are caused by katabatic jumps forming within polar troughs. This phenomena is analogous to the terrestrial Loewe phenomena over Antarctica's slopes and coastlines, resulting in a distinctive "wall of snow" during katabatic events. Our mesoscale modeling results thereby suggest that trough clouds might be present manifestations of the ice migration processes that yielded the internal cap structure discovered by radar observations, as part of a "cyclic step" process. This has important implications for the stability and possible migration over geological timescales of water ice surface reservoirs-and, overall, for the evolution of Mars' polar caps over geological timescales.

A gastric acid secretion model.

PubMed Central

de Beus, A M; Fabry, T L; Lacker, H M

1993-01-01

A theory of gastric acid production and self-protection is formulated mathematically and examined for clinical and experimental correlations, implications, and predictions using analytic and numerical techniques. In our model, gastric acid secretion in the stomach, as represented by an archetypal gastron, consists of two chambers, circulatory and luminal, connected by two different regions of ion exchange. The capillary circulation of the gastric mucosa is arranged in arterial-venous arcades which pass from the gastric glands up to the surface epithelial lining of the lumen; therefore the upstream region of the capillary chamber communicates with oxyntic cells, while the downstream region communicates with epithelial cells. Both cell types abut the gastric lumen. Ion currents across the upstream region are calculated from a steady-state oxyntic cell model with active ion transport, while the downstream ion fluxes are (facilitated) diffusion driven or secondarily active. Water transport is considered iso-osmotic. The steady-state model is solved in closed form for low gastric lumen pH. A wide variety of previously performed static and dynamic experiments on ion and CO2 transport in the gastric lumen and gastric blood supply are for the first time correlated with each other for an (at least) semiquantitative test of current concepts of gastric acid secretion and for the purpose of model verification. Agreement with the data is reported with a few outstanding and instructive exceptions. Model predictions and implications are also discussed. Images FIGURE 1 PMID:8396457

Implications of abundant hygroscopic minerals in the Martian regolith

NASA Technical Reports Server (NTRS)

Clark, B. C.

1978-01-01

Converging lines of evidence suggest that a significant portion of the Martian surface fines may consist of salts and smectite clays. Salts can form stoichiometric hydrates as well as eutectic solutions with depressed freezing points; clays contain bound water of constitution and adsorb significant quantities of water from the vapor phase. The formation of ice may be suppressed by these minerals in some regions on Mars, and their presence in abundance would imply important consequences for atmospheric and geologic processes and the prospects for exobiology.

Structural and functional analyses of human cerebral cortex using a surface-based atlas

NASA Technical Reports Server (NTRS)

Van Essen, D. C.; Drury, H. A.

1997-01-01

We have analyzed the geometry, geography, and functional organization of human cerebral cortex using surface reconstructions and cortical flat maps of the left and right hemispheres generated from a digital atlas (the Visible Man). The total surface area of the reconstructed Visible Man neocortex is 1570 cm2 (both hemispheres), approximately 70% of which is buried in sulci. By linking the Visible Man cerebrum to the Talairach stereotaxic coordinate space, the locations of activation foci reported in neuroimaging studies can be readily visualized in relation to the cortical surface. The associated spatial uncertainty was empirically shown to have a radius in three dimensions of approximately 10 mm. Application of this approach to studies of visual cortex reveals the overall patterns of activation associated with different aspects of visual function and the relationship of these patterns to topographically organized visual areas. Our analysis supports a distinction between an anterior region in ventral occipito-temporal cortex that is selectively involved in form processing and a more posterior region (in or near areas VP and V4v) involved in both form and color processing. Foci associated with motion processing are mainly concentrated in a region along the occipito-temporal junction, the ventral portion of which overlaps with foci also implicated in form processing. Comparisons between flat maps of human and macaque monkey cerebral cortex indicate significant differences as well as many similarities in the relative sizes and positions of cortical regions known or suspected to be homologous in the two species.

Analysis of policy implications and challenges of the Cuban health assistance program related to human resources for health in the Pacific

PubMed Central

2012-01-01

Background Cuba has extended its medical cooperation to Pacific Island Countries (PICs) by supplying doctors to boost service delivery and offering scholarships for Pacific Islanders to study medicine in Cuba. Given the small populations of PICs, the Cuban engagement could prove particularly significant for health systems development in the region. This paper reviews the magnitude and form of Cuban medical cooperation in the Pacific and analyses its implications for health policy, human resource capacity and overall development assistance for health in the region. Methods We reviewed both published and grey literature on health workforce in the Pacific including health workforce plans and human resource policy documents. Further information was gathered through discussions with key stakeholders involved in health workforce development in the region. Results Cuba formalised its relationship with PICs in September 2008 following the first Cuba-Pacific Islands ministerial meeting. Some 33 Cuban health personnel work in Pacific Island Countries and 177 Pacific island students are studying medicine in Cuba in 2010 with the most extensive engagement in Kiribati, the Solomon Islands, Tuvalu and Vanuatu. The cost of the Cuban medical cooperation to PICs comes in the form of countries providing benefits and paying allowances to in-country Cuban health workers and return airfares for their students in Cuba. This has been seen by some PICs as a cheaper alternative to training doctors in other countries. Conclusions The Cuban engagement with PICs, while smaller than engagement with other countries, presents several opportunities and challenges for health system strengthening in the region. In particular, it allows PICs to increase their health workforce numbers at relatively low cost and extends delivery of health services to remote areas. A key challenge is that with the potential increase in the number of medical doctors, once the local students return from Cuba, some PICs may face substantial rises in salary expenditure which could significantly strain already stretched government budgets. Finally, the Cuban engagement in the Pacific has implications for the wider geo-political and health sector support environment as the relatively few major bilateral donors, notably Australia (through AusAID) and New Zealand (through NZAID), and multilaterals such as the World Bank will need to accommodate an additional player with whom existing links are limited. PMID:22558940

A new species of Dyoros (Brachiopoda; Chonetoidea) from Nevada (United States) and stratigraphic implications for the Pennsylvanian and Permian Antler Overlap assemblage [Une nouvelle espèce de Dyoros (Brachiopoda; Chonetoidea) du Nevada (États-Unis) et implications stratigraphiques pour le Complexe chevauchant d'Antler (Pennsylvanien et Permien)

USGS Publications Warehouse

Racheboeuf, Patrick R.; Moore, Thomas E.; Blodgett, Robert B.

2004-01-01

Newly discovered fossil localities in coarse-grained deposits of the Pennsylvanian and Permian Antler overlap assemblage in the southern Shoshone Range, north-central Nevada have yielded a low-diversity assemblage consisting chiefly of a new species of chonetoidean brachiopod: Dyoros (Lissosia) nevadaensis nov. sp. The subgenus Dyoros (Lissosia), is known from Leonardian and lower Guadalupian strata in North America, mainly in Texas. The coarse-grained lithology of the host strata, their unconformable relation on deformed lower Paleozoic rocks, and the Leonardian and(or) lower Guadalupian age indicated by Dyoros (Lissosia) provide evidence that host strata are younger than strata of the Antler overlap assemblage in nearby areas of the southern Shoshone Range and suggest that an unconformity of local extent may be present within the overlap assemblage. The fossil age ranges and lithologic data suggest that the host strata may be correlative with the Guadalupian Edna Mountain Formation, an unconformity-bounded unit that forms the upper part of the Antler sequence in the Battle Mountain area to the north. This correlation suggests that the unconformity beneath these strata may have regional extent in north-central Nevada. The origin of the inferred regional unconformity is unknown and may have resulted from relative changes of sea level or regional extensional or contractional tectonism in the area of the former Antler highlands, which forms the substrate for the Antler overlap assemblage. ?? 2004 Elsevier SAS. All rights reserved.

Neogene evolution of the North New Guinea basin, Papua New Guinea: New constraints from seismic and subsidence analysis and implications for hydrocarbon exploration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cullen, A.B.; Pigott, J.D.

1990-06-01

The present-day North New Guinea basin is a Plio-Pleistocene successor basin that formed subsequent to accretion of the Finisterre volcanic arc to the Australian Plate. The Ramu, Sepik, and Piore infrabasins formed in a forearc setting relative to the continental Maramuni magmatic arc. The evolution of these infrabasins was strongly influenced by accretion of the composite Torricelli-Prince Alexander terrane to the Australian Plate. Regional reflection seismic data and tectonic subsidence-subsidence rate calculations for seven wells drilled in the North New Guinea basin reveal a complex history. The timing and magnitude of subsidence and changes in subsidence rates differ between eachmore » of the Miocene infrabasins. A diachronous middle to late Miocene unconformity generally truncates infrabasin sequences. The Nopan No. 1 in the Sepik basin, however, has a complete middle Miocene to Pleistocene sedimentary record. This well records late Miocene negative subsidence rates documenting that the Nopan anticline grew as erosion occurred elsewhere in the region. This circumstance suggests that the major, sequence-bounding unconformity results from regional uplift and deformation, rather than changes in global sea level. The Plio-Pleistocene evolution of the North New Guinea basin has two profound implications regarding hydrocarbon exploration. First, the late Pliocene structural inversion of parts of the basin hinders stratigraphic and facies correlation inferred from the present setting. The recognition of basin inversion is particularly important in the Piore basin for predicting the distribution of potential reservoir facies in the Miocene carbonates. Second, the subsidence data suggest that although potential source rocks may be thermally within the oil window, these rocks may not have had sufficient time to mature owing to their recent burial.« less

Pre-main-sequence isochrones - II. Revising star and planet formation time-scales

NASA Astrophysics Data System (ADS)

Bell, Cameron P. M.; Naylor, Tim; Mayne, N. J.; Jeffries, R. D.; Littlefair, S. P.

2013-09-01

We have derived ages for 13 young (<30 Myr) star-forming regions and find that they are up to a factor of 2 older than the ages typically adopted in the literature. This result has wide-ranging implications, including that circumstellar discs survive longer (≃ 10-12 Myr) and that the average Class I lifetime is greater (≃1 Myr) than currently believed. For each star-forming region, we derived two ages from colour-magnitude diagrams. First, we fitted models of the evolution between the zero-age main sequence and terminal-age main sequence to derive a homogeneous set of main-sequence ages, distances and reddenings with statistically meaningful uncertainties. Our second age for each star-forming region was derived by fitting pre-main-sequence stars to new semi-empirical model isochrones. For the first time (for a set of clusters younger than 50 Myr), we find broad agreement between these two ages, and since these are derived from two distinct mass regimes that rely on different aspects of stellar physics, it gives us confidence in the new age scale. This agreement is largely due to our adoption of empirical colour-Teff relations and bolometric corrections for pre-main-sequence stars cooler than 4000 K. The revised ages for the star-forming regions in our sample are: ˜2 Myr for NGC 6611 (Eagle Nebula; M 16), IC 5146 (Cocoon Nebula), NGC 6530 (Lagoon Nebula; M 8) and NGC 2244 (Rosette Nebula); ˜6 Myr for σ Ori, Cep OB3b and IC 348; ≃10 Myr for λ Ori (Collinder 69); ≃11 Myr for NGC 2169; ≃12 Myr for NGC 2362; ≃13 Myr for NGC 7160; ≃14 Myr for χ Per (NGC 884); and ≃20 Myr for NGC 1960 (M 36).

Revising Star and Planet Formation Timescales

NASA Astrophysics Data System (ADS)

Bell, Cameron P. M.; Naylor, Tim; Mayne, N. J.; Jeffries, R. D.; Littlefair, S. P.

2013-07-01

We have derived ages for 13 young (<30 Myr) star-forming regions and find that they are up to a factor of 2 older than the ages typically adopted in the literature. This result has wide-ranging implications, including that circumstellar discs survive longer (≃ 10-12 Myr) and that the average Class I lifetime is greater (≃1 Myr) than currently believed. For each star-forming region, we derived two ages from colour-magnitude diagrams. First, we fitted models of the evolution between the zero-age main sequence and terminal-age main sequence to derive a homogeneous set of main-sequence ages, distances and reddenings with statistically meaningful uncertainties. Our second age for each star-forming region was derived by fitting pre-main-sequence stars to new semi-empirical model isochrones. For the first time (for a set of clusters younger than 50 Myr), we find broad agreement between these two ages, and since these are derived from two distinct mass regimes that rely on different aspects of stellar physics, it gives us confidence in the new age scale. This agreement is largely due to our adoption of empirical colour-Teff relations and bolometric corrections for pre-main-sequence stars cooler than 4000 K. The revised ages for the star-forming regions in our sample are: 2 Myr for NGC 6611 (Eagle Nebula; M 16), IC 5146 (Cocoon Nebula), NGC 6530 (Lagoon Nebula; M 8) and NGC 2244 (Rosette Nebula); 6 Myr for σ Ori, Cep OB3b and IC 348; ≃10 Myr for λ Ori (Collinder 69); ≃11 Myr for NGC 2169; ≃12 Myr for NGC 2362; ≃13 Myr for NGC 7160; ≃14 Myr for χ Per (NGC 884); and ≃20 Myr for NGC 1960 (M 36).

Properties of Minor Ions in the Solar Wind and Implications for the Background Solar Wind Plasma

NASA Technical Reports Server (NTRS)

Esser, Ruth; Wagner, William (Technical Monitor)

2003-01-01

Ion charge states measured in situ in interplanetary space are formed in the inner coronal regions below 5 solar radii, hence they carry information on the properties of the solar wind plasma in that region. The plasma parameters that are important in the ion forming processes are the electron density, the electron temperature and the flow speeds of the individual ion species. In addition, if the electron distribution function deviates from a Maxwellian already in the inner corona, then the enhanced tail of that distribution function, also called halo, greatly effects the ion composition. The goal of the proposal is to make use of ion fractions observed in situ in the solar wind to learn about both, the plasma conditions in the inner corona and the expansion and ion formation itself. This study is carried out using solar wind models, coronal observations, and ion fraction calculations in conjunction with the in situ observations.

Staufen1 senses overall transcript secondary structure to regulate translation

PubMed Central

Ricci, Emiliano P; Kucukural, Alper; Cenik, Can; Mercier, Blandine C; Singh, Guramrit; Heyer, Erin E; Ashar-Patel, Ami; Peng, Lingtao; Moore, Melissa J

2015-01-01

Human Staufen1 (Stau1) is a double-stranded RNA (dsRNA)-binding protein implicated in multiple post-transcriptional gene-regulatory processes. Here we combined RNA immunoprecipitation in tandem (RIPiT) with RNase footprinting, formaldehyde cross-linking, sonication-mediated RNA fragmentation and deep sequencing to map Staufen1-binding sites transcriptome wide. We find that Stau1 binds complex secondary structures containing multiple short helices, many of which are formed by inverted Alu elements in annotated 3′ untranslated regions (UTRs) or in ‘strongly distal’ 3′ UTRs. Stau1 also interacts with actively translating ribosomes and with mRNA coding sequences (CDSs) and 3′ UTRs in proportion to their GC content and propensity to form internal secondary structure. On mRNAs with high CDS GC content, higher Stau1 levels lead to greater ribosome densities, thus suggesting a general role for Stau1 in modulating translation elongation through structured CDS regions. Our results also indicate that Stau1 regulates translation of transcription-regulatory proteins. PMID:24336223

Paleoclimates on Titan: the case of a pure nitrogen atmosphere

NASA Astrophysics Data System (ADS)

Charnay, Benjamin; Forget, Francois; Tobie, Gabriel; Sotin, Christophe; Wordsworth, Robin

2016-06-01

Several clues indicate that Titan's atmosphere has been depleted in methane during some period of its history, possibly as recently as 0.5-1 billion years ago. It could also happen in the future. Under these conditions, the atmosphere becomes only composed of nitrogen with a range of temperature and pressure allowing liquid or solid nitrogen to condense. We explored these exotic climates throughout Titan's history with a 3D Global Climate Model (GCM) including the nitrogen cycle and the radiative effect of nitrogen clouds (Charnay et al. 2014). We found that for the last billion years, only small polar nitrogen lakes should have formed. Yet, before 1 Ga, a significant part of the atmosphere could have condensed, forming deep nitrogen polar seas, which could have flowed and flooded the equatorial regions. During this talk, I will present our results and discuss the possible implications for the erosion and the age of Titan's surface, for the flattening of the polar regions and for the methane outgassing on Titan.

Ceruloplasmin regulates iron levels in the CNS and prevents free radical injury.

PubMed

Patel, Bharatkumar N; Dunn, Robert J; Jeong, Suh Young; Zhu, Qinzhang; Julien, Jean-Pierre; David, Samuel

2002-08-01

Ceruloplasmin is a ferroxidase that oxidizes toxic ferrous iron to its nontoxic ferric form. We have previously reported that a glycosylphosphatidylinositol-anchored form of ceruloplasmin is expressed in the mammalian CNS. To better understand the role of ceruloplasmin in iron homeostasis in the CNS, we generated a ceruloplasmin gene-deficient (Cp(-/-)) mouse. Adult Cp(-/-) mice showed increased iron deposition in several regions of the CNS such as the cerebellum and brainstem. Increased lipid peroxidation was also seen in some CNS regions. Cerebellar cells from neonatal Cp(-/-) mice were also more susceptible to oxidative stress in vitro. Cp(-/-) mice showed deficits in motor coordination that were associated with a loss of brainstem dopaminergic neurons. These results indicate that ceruloplasmin plays an important role in maintaining iron homeostasis in the CNS and in protecting the CNS from iron-mediated free radical injury. Therefore, the antioxidant effects of ceruloplasmin could have important implications for various neurodegenerative diseases such as Parkinson's disease and Alzheimer's disease in which iron deposition is known to occur.

Functional implications of an intermeshing cogwheel-like interaction between TolC and MacA in the action of macrolide-specific efflux pump MacAB-TolC.

PubMed

Xu, Yongbin; Song, Saemee; Moeller, Arne; Kim, Nahee; Piao, Shunfu; Sim, Se-Hoon; Kang, Mooseok; Yu, Wookyung; Cho, Hyun-Soo; Chang, Iksoo; Lee, Kangseok; Ha, Nam-Chul

2011-04-15

Macrolide-specific efflux pump MacAB-TolC has been identified in diverse gram-negative bacteria including Escherichia coli. The inner membrane transporter MacB requires the outer membrane factor TolC and the periplasmic adaptor protein MacA to form a functional tripartite complex. In this study, we used a chimeric protein containing the tip region of the TolC α-barrel to investigate the role of the TolC α-barrel tip region with regard to its interaction with MacA. The chimeric protein formed a stable complex with MacA, and the complex formation was abolished by substitution at the functionally essential residues located at the MacA α-helical tip region. Electron microscopic study delineated that this complex was made by tip-to-tip interaction between the tip regions of the α-barrels of TolC and MacA, which correlated well with the TolC and MacA complex calculated by molecular dynamics. Taken together, our results demonstrate that the MacA hexamer interacts with TolC in a tip-to-tip manner, and implies the manner by which MacA induces opening of the TolC channel.

Functional Implications of an Intermeshing Cogwheel-like Interaction between TolC and MacA in the Action of Macrolide-specific Efflux Pump MacAB-TolC*

PubMed Central

Xu, Yongbin; Song, Saemee; Moeller, Arne; Kim, Nahee; Piao, Shunfu; Sim, Se-Hoon; Kang, Mooseok; Yu, Wookyung; Cho, Hyun-Soo; Chang, Iksoo; Lee, Kangseok; Ha, Nam-Chul

2011-01-01

Macrolide-specific efflux pump MacAB-TolC has been identified in diverse Gram-negative bacteria including Escherichia coli. The inner membrane transporter MacB requires the outer membrane factor TolC and the periplasmic adaptor protein MacA to form a functional tripartite complex. In this study, we used a chimeric protein containing the tip region of the TolC α-barrel to investigate the role of the TolC α-barrel tip region with regard to its interaction with MacA. The chimeric protein formed a stable complex with MacA, and the complex formation was abolished by substitution at the functionally essential residues located at the MacA α-helical tip region. Electron microscopic study delineated that this complex was made by tip-to-tip interaction between the tip regions of the α-barrels of TolC and MacA, which correlated well with the TolC and MacA complex calculated by molecular dynamics. Taken together, our results demonstrate that the MacA hexamer interacts with TolC in a tip-to-tip manner, and implies the manner by which MacA induces opening of the TolC channel. PMID:21325274

The severe perinatal form of autosomal recessive polycystic kidney disease maps to chromosome 6p21.1-p12: Implications for genetic counseling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guay-Woodford, L.M.; Hopkins, S.D.; Waldo, F.B.

Autosomal recessive polycystic kidney disease (ARPKD) is a one of the most common hereditary renal cystic diseases in children. Its clinical spectrum is widely variable with most cases presenting in infancy. Most affected neonates die within the first few hours of life. At present, prenatal diagnosis relies on fetal sonography, which is often imprecise in detecting even the severe form of the disease. Recently, in a cohort of families with mostly milder ARPKD phenotypes, an ARPKD locus was mapped to a 13-cM region of chromosome 6p21-cen. To determine whether severe perinatal ARPKD also maps to chromosome 6p, we have analyzedmore » the segregation of seven microsatellite markers from the ARPKD interval in 22 families with the severe phenotype. In the majority of the affected infants, ARPKD was documented by hisopathology. Our data confirm linkage and refine the ARPKD region to a 3.8-cM interval, delimited by the markers D6S465/D6S427/D6S436/D6S272 and D6S466. Taken together, these results suggest that, despite the wide variability in clinical phenotypes, there is a single ARPKD gene. These linkage data and the absence of genetic heterogeneity in all families tested to date have important implications for DNA-based prenatal diagnoses as well as for the isolation of the ARPKD gene. 22 refs., 4 figs., 1 tab.« less

Two different sources of water for the early solar nebula.

PubMed

Kupper, Stefan; Tornow, Carmen; Gast, Philipp

2012-06-01

Water is essential for life. This is a trivial fact but has profound implications since the forming of life on the early Earth required water. The sources of water and the related amount of delivery depend not only on the conditions on the early Earth itself but also on the evolutionary history of the solar system. Thus we ask where and when water formed in the solar nebula-the precursor of the solar system. In this paper we explore the chemical mechanics for water formation and its expected abundance. This is achieved by studying the parental cloud core of the solar nebula and its gravitational collapse. We have identified two different sources of water for the region of Earth's accretion. The first being the sublimation of the icy mantles of dust grains formed in the parental cloud. The second source is located in the inner region of the collapsing cloud core - the so-called hot corino with a temperature of several hundred Kelvin. There, water is produced efficiently in the gas phase by reactions between neutral molecules. Additionally, we analyse the dependence of the production of water on the initial abundance ratio between carbon and oxygen.

Sulfate Mineral Formation from Acid-Weathered Phyllosilicates: Implications for the Aqueous History of Mars

NASA Technical Reports Server (NTRS)

Craig, P. I.; Ming, D. W.; Rampe, E. B.; Morris, R. V.

2015-01-01

Phyllosilicates on Mars are thought to have formed under neutral to alkaline conditions during Mars' earliest Noachian geologic era (approx. 4.1-3.7 Gya). Sulfate formation, on the other hand, requires more acidic conditions which are thought to have occurred later during Mars' Hesperian era (approx. 3.7-3.0 Gya). Therefore, regions on Mars where phyllosilicates and sulfates are found in close proximity to each other provide evidence for the geologic and aqueous conditions during this global transition. Both phyllosilicates and sulfates form in the presence of water and thus give clues to the aqueous history of Mars and its potential for habitability. Phyllosilicates that formed during the Noachian era may have been weathered by the prevailing acidic conditions that characterize the Hesperian. Therefore, the purpose of this study is to characterize the alteration products resulting from acid-sulfate weathered phyllosilicates in laboratory experiments. This study focuses on two phyllosilicates commonly identified with sulfates on Mars: nontronite and saponite. We also compare our results to observations of phyllosilicates and sulfates on Mars to better understand the formation process of sulfates in close proximity to phyllosilicates on Mars and constrain the aqueous conditions of these regions on Mars.

Latin American Social Medicine and Global Social Medicine

PubMed Central

Yamada, Seiji

2003-01-01

A fundamental change in the theory underlying public health and medicine is needed. Latin American social medicine (LASM), originating in a region of the world that has been subjected to colonial and postcolonial influence, will be part of this change. To the extent that the social production of disease among people in other regions is a consequence of various large-scale forms of domination, LASM offers a relevant analysis, models of resistance, and exemplars of social medicine in practice. I draw upon LASM to examine the social production of disease in the Marshall Islands and Iraq. I suggest a basis for a global social medicine in the shared experience of suffering and describe implications for public health theory and practice. PMID:14652319

Work and empowerment: women and agriculture in South India.

PubMed

Rao, Smriti

2011-01-01

This article explores the implications of women's work in agriculture in Telangana, a region in the state of Andhra Pradesh, India. I suggest that higher capital costs for cultivators' post-liberalisation increased the pressure to contain wage costs in a region where women form the majority of the agricultural wage labour force. Under such conditions, when women perform both own-cultivation as well as agricultural wage work in the fields of others, they face pressure to restrict bargaining for higher wages, contributing to a widening gender wage gap. To the extent that wages shape intra-household bargaining power, the empowering effect of workforce participation for such women would thus be blunted. From available NSS data I provide some preliminary evidence in support of this argument.

DELAYED HYPERSENSITIVITY

PubMed Central

Uhr, Jonathan W.; Salvin, S. B.; Pappenheimer, A. M.

1957-01-01

A general method for induction of the delayed hypersensitive state directed against single protein antigens is described. The method consists of intradermal injection of minute amounts of washed immune precipitates containing the antigen in question. Provided the specific precipitates are formed in the region of antibody excess, maximal sensitivity develops at least 2 to 3 weeks before detectable circulating antibody is formed in guinea pigs against the sensitizing antigen. Neither adjuvant nor killed acid-fast bacteria are required for induction of the delayed hypersensitive state although the degree of sensitization is considerably increased when the sensitizing material is incorporated in Freund's complete adjuvant. Characteristics of the "delayed" as opposed to the "immediate" hypersensitive states in the guinea pig are described and implications of the findings are discussed. PMID:13385403

Rumor, gossip and blame: implications for HIV/AIDS prevention in the South African lowveld.

PubMed

Stadler, Jonathan

2003-08-01

The HIV/AIDS epidemic provides fertile breeding ground for theories of the origin of HIV/AIDS, its mode of transmission, and the allocation of blame. Drawing on ethnographic research in the Bushbuckridge region of the South African lowveld, this article examines the articulation of AIDS through gossip and rumor. These oral forms create moral readings of behavior and shape folk discourses of AIDS that resist dominant epidemiological explanations. Significantly, constructions of AIDS are not uniform. Although elders claim AIDS as traditional and curable, younger men and women support theories of AIDS as a modern, foreign disease. Witchcraft beliefs are popular in explaining why certain people die and not others. At times, rumor may escalate into a moral panic. The implications of these findings for social responses to the AIDS epidemic and HIV/AIDS prevention are explored.

Very high potassium (VHK) basalt - Complications in mare basalt petrogenesis

NASA Technical Reports Server (NTRS)

Shervais, J. W.; Taylor, L. A.; Laul, J. C.; Shih, C.-Y.; Nyquist, L. E.

1985-01-01

The first comprehensive report on the petrology and geochemistry of Apollo 14 VHK (Very High Potassium) basalts and their implications for lunar evolution is presented. The reported data are most consistent with the hypothesis that VHK basalts formed through the partial assimilation of granite by a normal low-Ti, high-Al mare basalt magma. Assimilation was preceded by the diffusion-controlled exchange of alkalis and Ba between basalt magma and the low-temperature melt fraction of the granite. Hypotheses involving volatile/nonvolatile fractionations or long-term enrichment of the source regions in K are inconsistent with the suprachondritic Ba/La ratios and low initial Sr-87/Sr-86 ratios of VHK basalt. An important implication of this conclusion is that granite should be a significant component of the lunar crust at the Apollo 14 site.

Invited review: climate change impacts in polar regions: lessons from Antarctic moss bank archives.

PubMed

Royles, Jessica; Griffiths, Howard

2015-03-01

Mosses are the dominant plants in polar and boreal regions, areas which are experiencing rapid impacts of regional warming. Long-term monitoring programmes provide some records of the rate of recent climate change, but moss peat banks contain an unrivalled temporal record of past climate change on terrestrial plant Antarctic systems. We summarise the current understanding of climatic proxies and determinants of moss growth for contrasting continental and maritime Antarctic regions, as informed by 13C and 18O signals in organic material. Rates of moss accumulation are more than three times higher in the maritime Antarctic than continental Antarctica with growing season length being a critical determinant of growth rate, and high carbon isotope discrimination values reflecting optimal hydration conditions. Correlation plots of 13C and 18O values show that species (Chorisodontium aciphyllum / Polytrichum strictum) and growth form (hummock / bank) are the major determinants of measured isotope ratios. The interplay between moss growth form, photosynthetic physiology, water status and isotope composition are compared with developments of secondary proxies, such as chlorophyll fluorescence. These approaches provide a framework to consider the potential impact of climate change on terrestrial Antarctic habitats as well as having implications for future studies of temperate, boreal and Arctic peatlands. There are many urgent ecological and environmental problems in the Arctic related to mosses in a changing climate, but the geographical ranges of species and life-forms are difficult to track individually. Our goal was to translate what we have learned from the more simple systems in Antarctica, for application to Arctic habitats. © 2014 John Wiley & Sons Ltd.

Characterization of phyllosilicates observed in the central Mawrth Vallis region, Mars, their potential formational processes, and implications for past climate

USGS Publications Warehouse

McKeown, N.K.; Bishop, J.L.; Noe Dobrea, E.Z.; Ehlmann, B.L.; Parente, M.; Mustard, J.F.; Murchie, S.L.; Swayze, G.A.; Bibring, J.-P.; Silver, E.A.

2009-01-01

Mawrth Vallis contains one of the largest exposures of phyllosilicates on Mars. Nontronite, montmorillonite, kaolinite, and hydrated silica have been identified throughout the region using data from the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM). In addition, saponite has been identified in one observation within a crater. These individual minerals are identified and distinguished by features at 1.38-1.42, ???1.91, and 2.17-2.41 ??m. There are two main phyllosilicate units in the Mawrth Vallis region. The lowermost unit is nontronite bearing, unconformably overlain by an Al-phyllosilicate unit containing montmorillonite plus hydrated silica, with a thin layer of kaolinite plus hydrated silica at the top of the unit. These two units are draped by a spectrally unremarkable capping unit. Smectites generally form in neutral to alkaline environments, while kaolinite and hydrated silica typically form in slightly acidic conditions; thus, the observed phyllosilicates may reflect a change in aqueous chemistry. Spectra retrieved near the boundary between the nontronite and Al-phyllosilicate units exhibit a strong positive slope from 1 to 2 ??m, likely from a ferrous component within the rock. This ferrous component indicates either rapid deposition in an oxidizing environment or reducing conditions. Formation of each of the phyllosilicate minerals identified requires liquid water, thus indicating a regional wet period in the Noachian when these units formed. The two main phyllosilicate units may be extensive layers of altered volcanic ash. Other potential formational processes include sediment deposition into a marine or lacustrine basin or pedogenesis. Copyright 2009 by the American Geophysical Union.

Amplitude mediated chimera states with active and inactive oscillators

NASA Astrophysics Data System (ADS)

Mukherjee, Rupak; Sen, Abhijit

2018-05-01

The emergence and nature of amplitude mediated chimera states, spatio-temporal patterns of co-existing coherent and incoherent regions, are investigated for a globally coupled system of active and inactive Ginzburg-Landau oscillators. The existence domain of such states is found to shrink and shift in parametric space with the increase in the fraction of inactive oscillators. The role of inactive oscillators is found to be twofold—they get activated to form a separate region of coherent oscillations and, in addition, decrease the common collective frequency of the coherent regions by their presence. The dynamical origin of these effects is delineated through a bifurcation analysis of a reduced model system that is based on a mean field approximation. Our results may have practical implications for the robustness of such states in biological or physical systems where age related deterioration in the functionality of components can occur.

Systematic Search for Gene-Gene Interaction Effect on Prostate Cancer Risk

DTIC Science & Technology

2011-07-01

PLEASE DO NOT RETURN YOUR FORM TO THE ABOVE ADDRESS. 1. REPORT DATE (DD-MM-YYYY) 2 . REPORT TYPE 3. DATES COVERED (From - To) 4. TITLE AND SUBTITLE 5a...identify SNPs in the genome that interact to have stronger effects on PCa risk in the CGEMS GWAS data, 2 ) confirm the gene-gene interaction effect on PCa...for pairs of SNPs implicated in Aim 2 among the remaining 1,893 cases and 781 controls in CAPS, and 4) fine map the genomic regions where SNPs have

The current state of GMO governance: are we ready for GM animals?

PubMed

Vàzquez-Salat, Núria; Salter, Brian; Smets, Greet; Houdebine, Louis-Marie

2012-01-01

Given the history of GMO conflict and debate, the GM animal future is dependent on the response of the regulatory landscape and its associated range of interest groups at national, regional and international levels. Focusing on the EU and the USA, this article examines the likely form of that multi-level response, the increased role of cultural values, the contribution of new and existing interest groups and the consequent implications for the commercialization of both green and red GM animal biotechnology. Copyright © 2012. Published by Elsevier Inc.

Anomalous Bilateral Communication between the Inferior Alveolar Nerve and the Auriculotemporal Nerve: A Rare Variation

PubMed Central

BHARDWAJ, Nikha; SAHNI, Priya; SINGHVI, Abhishek; NAYAK, Meghanand; TIWARI, Vineeta

2014-01-01

Branches of the posterior division of the mandibular nerve show various anomalous communications in the infratemporal region. Understanding such communication has relevance in the management of neuropathies and surgical procedures in this region. This study was conducted to explore such communicating branches, anticipating that they might provide information of clinical significance. A total of 15 human cadavers (30 infratemporal regions) were studied to explore such communicating branches in infratemporal region. The branches of the posterior division of the mandibular nerve were carefully dissected, and these branches were studied and analysed for any abnormal course. In one case, a rare type of bilateral communication between the auriculotemporal nerve and the inferior alveolar nerve, forming a loop with no association with any structure, was observed. It is possible that such communicating branches may be associated with delayed regression of the first arch vessels. The clinical implications of these anomalous communications require further detailed study for improved management of neuropathies and surgical procedures. PMID:25977637

An Enterprising Approach to Regional Growth: Implications for Policy and the Role of VET--Support Document

ERIC Educational Resources Information Center

Garlick, Steve; Taylor, Michael; Plummer, Paul

2007-01-01

"An Enterprising Approach to Regional Growth: Implications for Policy and the Role of Vocational Education and Training" explores patterns of regional economic growth in Australia over the period 1984 to 2002 with the aim of identifying the drivers of variation in regional growth; the research also aimed to identify regional…

Structural Variation within the Amygdala and Ventromedial Prefrontal Cortex Predicts Memory for Impressions in Older Adults

PubMed Central

Cassidy, Brittany S.; Gutchess, Angela H.

2012-01-01

Research has shown that lesions to regions involved in social and emotional cognition disrupt socioemotional processing and memory. We investigated how structural variation of regions involved in socioemotional memory [ventromedial prefrontal cortex (vmPFC), amygdala], as opposed to a region implicated in explicit memory (hippocampus), affected memory for impressions in young and older adults. Anatomical MRI scans for 15 young and 15 older adults were obtained and reconstructed to gather information about cortical thickness and subcortical volume. Young adults had greater amygdala and hippocampus volumes than old, and thicker left vmPFC than old, although right vmPFC thickness did not differ across the age groups. Participants formed behavior-based impressions and responded to interpersonally meaningful, social but interpersonally irrelevant, or non-social prompts, and completed a memory test. Results showed that greater left amygdala volume predicted enhanced overall memory for impressions in older but not younger adults. Increased right vmPFC thickness in older, but not younger, adults correlated with enhanced memory for impressions formed in the interpersonally meaningful context. Hippocampal volume was not predictive of social memory in young or older adults. These findings demonstrate the importance of structural variation in regions linked to socioemotional processing in the retention of impressions with age, and suggest that the amygdala and vmPFC play integral roles when encoding and retrieving social information. PMID:22973250

Isolation of an Asymmetric RNA Uncoating Intermediate for a Single-Stranded RNA Plant Virus

PubMed Central

Bakker, Saskia E.; Ford, Robert J.; Barker, Amy M.; Robottom, Janice; Saunders, Keith; Pearson, Arwen R.; Ranson, Neil A.; Stockley, Peter G.

2012-01-01

We have determined the three-dimensional structures of both native and expanded forms of turnip crinkle virus (TCV), using cryo-electron microscopy, which allows direct visualization of the encapsidated single-stranded RNA and coat protein (CP) N-terminal regions not seen in the high-resolution X-ray structure of the virion. The expanded form, which is a putative disassembly intermediate during infection, arises from a separation of the capsid-forming domains of the CP subunits. Capsid expansion leads to the formation of pores that could allow exit of the viral RNA. A subset of the CP N-terminal regions becomes proteolytically accessible in the expanded form, although the RNA remains inaccessible to nuclease. Sedimentation velocity assays suggest that the expanded state is metastable and that expansion is not fully reversible. Proteolytically cleaved CP subunits dissociate from the capsid, presumably leading to increased electrostatic repulsion within the viral RNA. Consistent with this idea, electron microscopy images show that proteolysis introduces asymmetry into the TCV capsid and allows initial extrusion of the genome from a defined site. The apparent formation of polysomes in wheat germ extracts suggests that subsequent uncoating is linked to translation. The implication is that the viral RNA and its capsid play multiple roles during primary infections, consistent with ribosome-mediated genome uncoating to avoid host antiviral activity. PMID:22306464

Prospecting for Martian Ice from Orbit

NASA Technical Reports Server (NTRS)

Kanner, L. C.; Bell, M. S.; Allen, C. C.

2003-01-01

Recent data from the Gamma-Ray Spectrometer (GRS) on Mars Odyssey indicate the presence of a hydrogen-rich layer tens of centimeters thick in high latitudes on Mars. This hydrogen-rich layer correlates to previously determined regions of ice stability. It has been suggested that the subsurface hydrogen is ice and constitutes 35 plus or minus 15% by weight near the north and south polar regions. This study constrains the location of subsurface ice deposits on the scale of kilometers or smaller by combining GRS data with surface features indicative of subsurface ice. The most recognizable terrestrial geomorphic indicators of subsurface ice, formed in permafrost and periglacial environments, include thermokarst pits, pingos, pseudocraters and patterned ground. Patterned ground features have geometric forms such as circles, polygons, stripes and nets. This study focuses on the polygonal form of patterned ground, selected for its discernable shape and subsurface implications. Polygonal features are typically demarcated by troughs, beneath which grow vertical ice-wedges. Ice-wedges form in thermal contraction cracks in ice-rich soil and grow with annual freezing and thawing events repeated over tens of years. Ice wedges exist below the depth of seasonal freeze-thaw. Terrestrial ice wedges can be several meters deep and polygons can be tens of meters apart, and, on rare occasions, up to 1 km. The crack spacing of terrestrial polygons is typically 3 to 10 times the crack depth.

Visual completion from 2D cross-sections: Implications for visual theory and STEM education and practice.

PubMed

Gagnier, Kristin Michod; Shipley, Thomas F

2016-01-01

Accurately inferring three-dimensional (3D) structure from only a cross-section through that structure is not possible. However, many observers seem to be unaware of this fact. We present evidence for a 3D amodal completion process that may explain this phenomenon and provide new insights into how the perceptual system processes 3D structures. Across four experiments, observers viewed cross-sections of common objects and reported whether regions visible on the surface extended into the object. If they reported that the region extended, they were asked to indicate the orientation of extension or that the 3D shape was unknowable from the cross-section. Across Experiments 1, 2, and 3, participants frequently inferred 3D forms from surface views, showing a specific prior to report that regions in the cross-section extend straight back into the object, with little variance in orientation. In Experiment 3, we examined whether 3D visual inferences made from cross-sections are similar to other cases of amodal completion by examining how the inferences were influenced by observers' knowledge of the objects. Finally, in Experiment 4, we demonstrate that these systematic visual inferences are unlikely to result from demand characteristics or response biases. We argue that these 3D visual inferences have been largely unrecognized by the perception community, and have implications for models of 3D visual completion and science education.

Parkin promotes proteasomal degradation of p62: implication of selective vulnerability of neuronal cells in the pathogenesis of Parkinson's disease.

PubMed

Song, Pingping; Li, Shanshan; Wu, Hao; Gao, Ruize; Rao, Guanhua; Wang, Dongmei; Chen, Ziheng; Ma, Biao; Wang, Hongxia; Sui, Nan; Deng, Haiteng; Zhang, Zhuohua; Tang, Tieshan; Tan, Zheng; Han, Zehan; Lu, Tieyuan; Zhu, Yushan; Chen, Quan

2016-02-01

Mutations or inactivation of parkin, an E3 ubiquitin ligase, are associated with familial form or sporadic Parkinson's disease (PD), respectively, which manifested with the selective vulnerability of neuronal cells in substantia nigra (SN) and striatum (STR) regions. However, the underlying molecular mechanism linking parkin with the etiology of PD remains elusive. Here we report that p62, a critical regulator for protein quality control, inclusion body formation, selective autophagy and diverse signaling pathways, is a new substrate of parkin. P62 levels were increased in the SN and STR regions, but not in other brain regions in parkin knockout mice. Parkin directly interacts with and ubiquitinates p62 at the K13 to promote proteasomal degradation of p62 even in the absence of ATG5. Pathogenic mutations, knockdown of parkin or mutation of p62 at K13 prevented the degradation of p62. We further showed that parkin deficiency mice have pronounced loss of tyrosine hydroxylase positive neurons and have worse performance in motor test when treated with 6-hydroxydopamine hydrochloride in aged mice. These results suggest that, in addition to their critical role in regulating autophagy, p62 are subjected to parkin mediated proteasomal degradation and implicate that the dysregulation of parkin/p62 axis may involve in the selective vulnerability of neuronal cells during the onset of PD pathogenesis.

Phylogenetic relationships, character evolution, and taxonomic implications within the slipper lobsters (Crustacea: Decapoda: Scyllaridae).

PubMed

Yang, Chien-Hui; Bracken-Grissom, Heather; Kim, Dohyup; Crandall, Keith A; Chan, Tin-Yam

2012-01-01

The slipper lobsters belong to the family Scyllaridae which contains a total of 20 genera and 89 species distributed across four subfamilies (Arctidinae, Ibacinae, Scyllarinae, and Theninae). We have collected nucleotide sequence data from regions of five different genes (16S, 18S, COI, 28S, H3) to estimate phylogenetic relationships among 54 species from the Scyllaridae with a focus on the species rich subfamily Scyllarinae. We have included in our analyses at least one representative from all 20 genera in the Scyllaridae and 35 of the 52 species within the Scyllarinae. Our resulting phylogenetic estimate shows the subfamilies are monophyletic, except for Ibacinae, which has paraphyletic relationships among genera. Many of the genera within the Scyllarinae form non-monophyletic groups, while the genera from all other subfamilies form well supported clades. We discuss the implications of this history on the evolution of morphological characters and ecological transitions (nearshore vs. offshore) within the slipper lobsters. Finally, we identify, through ancestral state character reconstructions, key morphological features diagnostic of the major clades of diversity within the Scyllaridae and relate this character evolution to current taxonomy and classification. Copyright © 2011 Elsevier Inc. All rights reserved.

Long-lived volcanism within Argyre basin, Mars

NASA Astrophysics Data System (ADS)

Williams, Jean-Pierre; Dohm, James M.; Soare, Richard J.; Flahaut, Jessica; Lopes, Rosaly M. C.; Pathare, Asmin V.; Fairén, Alberto G.; Schulze-Makuch, Dirk; Buczkowski, Debra L.

2017-09-01

The Argyre basin, one of the largest impact structures on Mars with a diameter >1200 km, formed in the Early Noachian ∼3.93 Ga. The basin has collected volatiles and other material through time, and experienced partial infilling with water evident from stratigraphic sequences, crater statistics, topography, and geomorphology. Although volcanism has not been previously associated with the Argyre basin, our study of the northwest portion of the basin floor has revealed landforms suggesting volcanic and tectonic activity occurred including Argyre Mons, a ∼50 km wide volcanic-structure formed ∼3 Ga. Giant polygons with a similar surface age are also identified on terrain adjacent to the base of Argyre Mons, indicating the structure may have formed in a water-rich environment. In addition to Argyre Mons, cones, vents, mounds, dikes, and cavi or hollows, many of which are associated with extensional tectonics, are observed in the region. Multiple features appear to disrupt icy (and largely uncratered) terrain indicating a relatively young, Late Amazonian, formation age for at least some of the volcanic and tectonic features. The discovery of Argyre Mons, along with additional endogenic modification of the basin floor, suggests that the region has experienced episodes of volcanism over a protracted period of time. This has implications for habitability as the basin floor has been a region of elevated heat flow coupled with liquid water, water ice, and accumulation of sediments of diverse provenance with ranging geochemistry, along with magma-water interactions.

Defining and Mapping Mammalian Coat Pattern Genes: Multiple Genomic Regions Implicated in Domestic Cat Stripes and Spots

PubMed Central

Eizirik, Eduardo; David, Victor A.; Buckley-Beason, Valerie; Roelke, Melody E.; Schäffer, Alejandro A.; Hannah, Steven S.; Narfström, Kristina; O'Brien, Stephen J.; Menotti-Raymond, Marilyn

2010-01-01

Mammalian coat patterns (e.g., spots, stripes) are hypothesized to play important roles in camouflage and other relevant processes, yet the genetic and developmental bases for these phenotypes are completely unknown. The domestic cat, with its diversity of coat patterns, is an excellent model organism to investigate these phenomena. We have established three independent pedigrees to map the four recognized pattern variants classically considered to be specified by a single locus, Tabby; in order of dominance, these are the unpatterned agouti form called “Abyssinian” or “ticked” (Ta), followed by Spotted (Ts), Mackerel (TM), and Blotched (tb). We demonstrate that at least three different loci control the coat markings of the domestic cat. One locus, responsible for the Abyssinian form (herein termed the Ticked locus), maps to an ∼3.8-Mb region on cat chromosome B1. A second locus controls the Tabby alleles TM and tb, and maps to an ∼5-Mb genomic region on cat chromosome A1. One or more additional loci act as modifiers and create a spotted coat by altering mackerel stripes. On the basis of our results and associated observations, we hypothesize that mammalian patterned coats are formed by two distinct processes: a spatially oriented developmental mechanism that lays down a species-specific pattern of skin cell differentiation and a pigmentation-oriented mechanism that uses information from the preestablished pattern to regulate the synthesis of melanin profiles. PMID:19858284

Defining and mapping mammalian coat pattern genes: multiple genomic regions implicated in domestic cat stripes and spots.

PubMed

Eizirik, Eduardo; David, Victor A; Buckley-Beason, Valerie; Roelke, Melody E; Schäffer, Alejandro A; Hannah, Steven S; Narfström, Kristina; O'Brien, Stephen J; Menotti-Raymond, Marilyn

2010-01-01

Mammalian coat patterns (e.g., spots, stripes) are hypothesized to play important roles in camouflage and other relevant processes, yet the genetic and developmental bases for these phenotypes are completely unknown. The domestic cat, with its diversity of coat patterns, is an excellent model organism to investigate these phenomena. We have established three independent pedigrees to map the four recognized pattern variants classically considered to be specified by a single locus, Tabby; in order of dominance, these are the unpatterned agouti form called "Abyssinian" or "ticked" (T(a)), followed by Spotted (T(s)), Mackerel (T(M)), and Blotched (t(b)). We demonstrate that at least three different loci control the coat markings of the domestic cat. One locus, responsible for the Abyssinian form (herein termed the Ticked locus), maps to an approximately 3.8-Mb region on cat chromosome B1. A second locus controls the Tabby alleles T(M) and t(b), and maps to an approximately 5-Mb genomic region on cat chromosome A1. One or more additional loci act as modifiers and create a spotted coat by altering mackerel stripes. On the basis of our results and associated observations, we hypothesize that mammalian patterned coats are formed by two distinct processes: a spatially oriented developmental mechanism that lays down a species-specific pattern of skin cell differentiation and a pigmentation-oriented mechanism that uses information from the preestablished pattern to regulate the synthesis of melanin profiles.

Further mapping of 10q26 supports strong association of HTRA1 polymorphisms with age-related macular degeneration.

PubMed

Gibbs, Daniel; Yang, Zhenglin; Constantine, Ryan; Ma, Xiang; Camp, Nicola J; Yang, Xian; Chen, Hayou; Jorgenson, Adam; Hau, Vincent; Dewan, Andrew; Zeng, Jiexi; Harmon, Jennifer; Buehler, Jeanette; Brand, John M; Hoh, Josephine; Cameron, D Joshua; Dixit, Manjusha; Tong, Zongzhong; Zhang, Kang

2008-02-01

Age-related macular degeneration (AMD) is a complex disorder with genetic and environmental influences. The genetic influences affecting AMD are not well understood and few genes have been consistently implicated and replicated for this disease. A polymorphism (rs11200638) in a transcription factor binding site of the HTRA1 gene has been described, in previous reports, as being most significantly associated with AMD. In this paper, we investigate haplotype association and individual polymorphic association by genotyping additional variants in the AMD risk-associated region of chromosome 10q26. We demonstrate that rs11200638 in the promoter region and rs2293870 in exon 1 of HTRA1, are among the most significantly associated variants for advanced forms of AMD.

Attenuating illusory binding with TMS of the right parietal cortex

PubMed Central

Esterman, Michael; Verstynen, Timothy; Robertson, Lynn C.

2007-01-01

A number of neuroimaging and neuropsychology studies have implicated various regions of parietal cortex as playing a critical role in the binding of color and form into conjunctions. The current study investigates the role of two such regions by examining how parietal transcranial magnetic stimulation (TMS) influences binding errors known as ‘illusory conjunctions.’ Participants made fewer binding errors after 1 Hz rTMS of the right intraparietal sulcus (IPS), while basic perception of features (colors and shape) was unaffected. No perceptual effects were found following left IPS stimulation, or stimulation of the right angular gyrus at the junction of the transverse occipital sulcus (IPS/TOS). These results support a role for the parietal cortex in feature binding but in ways that may require rethinking. PMID:17336097

Carbon and oxygen abundances from recombination lines in low-metallicity star-forming galaxies. Implications for chemical evolution

NASA Astrophysics Data System (ADS)

Esteban, C.; García-Rojas, J.; Carigi, L.; Peimbert, M.; Bresolin, F.; López-Sánchez, A. R.; Mesa-Delgado, A.

2014-09-01

We present deep echelle spectrophotometry of the brightest emission-line knots of the star-forming galaxies He 2-10, Mrk 1271, NGC 3125, NGC 5408, POX 4, SDSS J1253-0312, Tol 1457-262, Tol 1924-416 and the H II region Hubble V in the Local Group dwarf irregular galaxy NGC 6822. The data have been taken with the Very Large Telescope Ultraviolet-Visual Echelle Spectrograph in the 3100-10420 Å range. We determine electron densities and temperatures of the ionized gas from several emission-line intensity ratios for all the objects. We derive the ionic abundances of C2+ and/or O2+ from faint pure recombination lines in several of the objects, permitting to derive their C/H and C/O ratios. We have explored the chemical evolution at low metallicities analysing the C/O versus O/H, C/O versus N/O and C/N versus O/H relations for Galactic and extragalactic H II regions and comparing with results for Galactic halo stars and damped Lyα systems. We find that H II regions in star-forming dwarf galaxies occupy a different locus in the C/O versus O/H diagram than those belonging to the inner discs of spiral galaxies, indicating their different chemical evolution histories, and that the bulk of C in the most metal-poor extragalactic H II regions should have the same origin than in halo stars. The comparison between the C/O ratios in H II regions and in stars of the Galactic thick and thin discs seems to give arguments to support the merging scenario for the origin of the Galactic thick disc. Finally, we find an apparent coupling between C and N enrichment at the usual metallicities determined for H II regions and that this coupling breaks in very low metallicity objects.

Many forms of culture.

PubMed

Cohen, Adam B

2009-04-01

Psychologists interested in culture have focused primarily on East-West differences in individualism-collectivism, or independent-interdependent self-construal. As important as this dimension is, there are many other forms of culture with many dimensions of cultural variability. Selecting from among the many understudied cultures in psychology, the author considers three kinds of cultures: religion, socioeconomic status, and region within a country. These cultures vary in a number of psychologically interesting ways. By studying more types of culture, psychologists stand to enrich how they define culture, how they think about universality and cultural specificity, their views of multiculturalism, how they do research on culture, and what dimensions of culture they study. Broadening the study of culture will have far-reaching implications for clinical issues, intergroup relations, and applied domains. (c) 2009 APA, all rights reserved.

Characterization of 3D interconnected microstructural network in mixed ionic and electronic conducting ceramic composites

NASA Astrophysics Data System (ADS)

Harris, William M.; Brinkman, Kyle S.; Lin, Ye; Su, Dong; Cocco, Alex P.; Nakajo, Arata; Degostin, Matthew B.; Chen-Wiegart, Yu-Chen Karen; Wang, Jun; Chen, Fanglin; Chu, Yong S.; Chiu, Wilson K. S.

2014-04-01

The microstructure and connectivity of the ionic and electronic conductive phases in composite ceramic membranes are directly related to device performance. Transmission electron microscopy (TEM) including chemical mapping combined with X-ray nanotomography (XNT) have been used to characterize the composition and 3-D microstructure of a MIEC composite model system consisting of a Ce0.8Gd0.2O2 (GDC) oxygen ion conductive phase and a CoFe2O4 (CFO) electronic conductive phase. The microstructural data is discussed, including the composition and distribution of an emergent phase which takes the form of isolated and distinct regions. Performance implications are considered with regards to the design of new material systems which evolve under non-equilibrium operating conditions.The microstructure and connectivity of the ionic and electronic conductive phases in composite ceramic membranes are directly related to device performance. Transmission electron microscopy (TEM) including chemical mapping combined with X-ray nanotomography (XNT) have been used to characterize the composition and 3-D microstructure of a MIEC composite model system consisting of a Ce0.8Gd0.2O2 (GDC) oxygen ion conductive phase and a CoFe2O4 (CFO) electronic conductive phase. The microstructural data is discussed, including the composition and distribution of an emergent phase which takes the form of isolated and distinct regions. Performance implications are considered with regards to the design of new material systems which evolve under non-equilibrium operating conditions. Electronic supplementary information (ESI) available. See DOI: 10.1039/c3nr06684c

International labour migration in the Asian-Pacific region: patterns, policies and economic implications.

PubMed

Athukorala, P

1993-11-01

"This paper reviews the literature on international labour migration from and within the Asian-Pacific region. It deals with patterns and characteristics of migration flows, government policies towards labour migration, and economic implications of labour migration for both labour-exporting and importing countries in the region. The indications are that, despite gradual slowing down of labour flows to the western industrial countries and the Middle East, labour migration will continue to be a major economic influence on surplus-labour countries in the region. As an integral part of the growth dynamism in the region, labour migration has now begun to take on a regional dimension, with immense implications for the process of industrial restructuring in high growth economies and the changing pattern of economic interdependence among countries." excerpt

The interhemispheric CA1 circuit governs rapid generalisation but not fear memory.

PubMed

Zhou, Heng; Xiong, Gui-Jing; Jing, Liang; Song, Ning-Ning; Pu, De-Lin; Tang, Xun; He, Xiao-Bing; Xu, Fu-Qiang; Huang, Jing-Fei; Li, Ling-Jiang; Richter-Levin, Gal; Mao, Rong-Rong; Zhou, Qi-Xin; Ding, Yu-Qiang; Xu, Lin

2017-12-19

Encoding specificity theory predicts most effective recall by the original conditions at encoding, while generalization endows recall flexibly under circumstances which deviate from the originals. The CA1 regions have been implicated in memory and generalization but whether and which locally separated mechanisms are involved is not clear. We report here that fear memory is quickly formed, but generalization develops gradually over 24 h. Generalization but not fear memory is impaired by inhibiting ipsilateral (ips) or contralateral (con) CA1, and by optogenetic silencing of the ipsCA1 projections onto conCA1. By contrast, in vivo fEPSP recordings reveal that ipsCA1-conCA1 synaptic efficacy is increased with delay over 24 h when generalization is formed but it is unchanged if generalization is disrupted. Direct excitation of ipsCA1-conCA1 synapses using chemogenetic hM3Dq facilitates generalization formation. Thus, rapid generalization is an active process dependent on bilateral CA1 regions, and encoded by gradual synaptic learning in ipsCA1-conCA1 circuit.

The geomorphology of Rhea - Implications for geologic history and surface processes

NASA Technical Reports Server (NTRS)

Moore, J. M.; Horner, V. M.; Greeley, R.

1985-01-01

Morphological analyses of landforms on Rhea are used to define three physiographic provinces: cratered terrain 1 undifferentiated; cratered terrain 1 lineated; and cratered terrain 2. The important statigraphic relationships between the different provinces are examined with respect to major impact basins and tectonic features. It is shown that the formation of multiringed basins may have caused, or at least controlled the locations of major resurfacing and mantling events. The diameters of the central peaks relative to the impact crater diameters are found to be significantly larger than those within the craters of the moon or Mercury. Both cratered and noncrater lineaments have regional orientations which do not fit current global or regional stress models. On the basis of the morphological analysis, a chronological order is established for the origin of the three provinces: the cratered terrain 1 province was formed first; and cratered terrain 1 lineated and cratered terrain 2 were formed second, and last, respectively. It is shown that the chronological order is generally consistent with current theoretical models of the evolution of Rhea.

Dissecting the telomere-inner nuclear membrane interface formed in meiosis.

PubMed

Pendlebury, Devon F; Fujiwara, Yasuhiro; Tesmer, Valerie M; Smith, Eric M; Shibuya, Hiroki; Watanabe, Yoshinori; Nandakumar, Jayakrishnan

2017-12-01

Tethering telomeres to the inner nuclear membrane (INM) allows homologous chromosome pairing during meiosis. The meiosis-specific protein TERB1 binds the telomeric protein TRF1 to establish telomere-INM connectivity and is essential for mouse fertility. Here we solve the structure of the human TRF1-TERB1 interface to reveal the structural basis for telomere-INM linkage. Disruption of this interface abrogates binding and compromises telomere-INM attachment in mice. An embedded CDK-phosphorylation site within the TRF1-binding region of TERB1 provides a mechanism for cap exchange, a late-pachytene phenomenon involving the dissociation of the TRF1-TERB1 complex. Indeed, further strengthening this interaction interferes with cap exchange. Finally, our biochemical analysis implicates distinct complexes for telomere-INM tethering and chromosome-end protection during meiosis. Our studies unravel the structure, stoichiometry, and physiological implications underlying telomere-INM tethering, thereby providing unprecedented insights into the unique function of telomeres in meiosis.

Growing Global Migration and Its Implications for the United States

DTIC Science & Technology

2001-03-01

Growing Global Migration and Its Implications for the United States NIE 2001-02D March 2001 Report Documentation Page Form ApprovedOMB No. 0704-0188...00-00-2001 4. TITLE AND SUBTITLE Growing Global Migration and Its Implications for the United States 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c...unclassified Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std Z39-18 Growing Global Migration and Its Implications for the United States This

Density functional theory study of defect energies and space charge distribution at a solid-oxide electrolyte surface

NASA Astrophysics Data System (ADS)

Han, Chu; Bongiorno, Angelo

2014-03-01

Yttrium-doped barium zirconate (BZY) is a proton conducting electrolyte forming a class of novel materials for new generation of solid oxide fuel cells, for hydrogen separation and purification, and for electrolysis of water. Here we use density functional theory calculations to compute the energy of protons and oxygen vacancies at the surface and in the bulk of lightly Y-doped BZY materials. We found that protons are energetically more stable at the surface termination than in the bulk of BZY by about 1 eV. In contrast, doubly-positively charged oxygen vacancies are found to form iso-energetic defects at both the terminal surface layer and in the bulk of BZY, while in the sub-surface region the defect energy raises by about 1 eV with respect to the value in the bulk. The energetic behavior of protons and oxygen vacancies in the near surface region of BZY is attributed to the competition of strain and electrostatic effects. Lattice model representations of BZY surfaces are then used in combination with Monte Carlo simulations to solve the Poisson-Boltzmann equation and investigate the implication of the results above on the structure of the space charge region at the surface of BZY materials.

Comparisons of Satellite Retrieval of Aerosol Properties from SeaWiFS and TOMS to the AERONET Measurements during ACE-Asia

NASA Technical Reports Server (NTRS)

Hsu, Christina N.; Tsay, Si-Chee; Herman, R.; Holben, Brent; Bhartia, P. K. (Technical Monitor)

2002-01-01

The primary goal of the ACE (Aerosol Characterization Experiment)-Asia mission is to increase our understanding of how atmospheric aerosol particles over the Asian-Pacific region affect the Earth climate system. In support of the day-to-day flight planning of ACE-Asia, we built a near real-time system to provide satellite data from the polar-orbiting instruments Earth Probe TOMS (Total Ozone Mapping Spectrometer) (in the form of absorbing aerosol index) and SeaWiFS (Sea-Viewing Wide Field-of-View Sensor) (in the form of aerosol optical thickness and Angstrom exponent). The results were available via web access. These satellite data provide a 'big picture' of aerosol distribution in the region, which is complementary to the ground based measurements. In this paper, we will briefly discuss the algorithms used to generate these data. The retrieved aerosol optical thickness and Angstrom exponent from SeaWiFS will be compared with those obtained from various AERONET (Aerosol Robotic Network) sites over the Asian-Pacific region. The TOMS aerosol index will also be compared with AERONET aerosol optical thickness over different aerosol conditions. Finally, we will discuss the climate implication of our studies using the combined satellite and AERONET observations.

VLBA SURVEYS OF OH MASERS IN STAR-FORMING REGIONS. I. SATELLITE LINES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ruiz-Velasco, A. E.; Felli, D.; Migenes, V.

2016-05-10

Using the Very Long Baseline Array we performed a high-resolution OH maser survey in Galactic star-forming regions (SFRs). We observed all the ground state spectral lines: the main lines at 1665 and 1667 MHz and the satellite lines at 1612 and 1720 MHz. Due to the exceptionality of finding satellite lines in SFRs, we will focus our discussion on those lines. In our sample of 41 OH maser sources, five (12%) showed the 1612 MHz line and ten (24%) showed the 1720 MHz line, with only one source showing both lines. We find that 1720 MHz emission is correlated withmore » the presence of H ii regions, suggesting that this emission could be used to diagnose or trace high-mass star formation. We include an analysis of the possible mechanisms that could be causing this correlation as well as assessing the possible relationships between lines in our sample. In particular, the presence of magnetic fields seems to play an important role as we found Zeeman splitting in four of our sources (W75 N, W3(OH), W51 and NGC 7538). Our results have implications for current understanding of the formation of high-mass stars as well as on the masing processes present in SFRs.« less

Variation in the nrDNA ITS of Pinus subsection Cembroides: implications for molecular systematic studies of pine species complexes.

PubMed

Gernandt, D S; Liston, A; Piñero, D

2001-12-01

The pinyon pines (Pinus subsection Cembroides), distributed in semiarid regions of the western United States and Mexico, include a mixture of relictual and more recently evolved taxa. To investigate relationships among the pinyons, we screened and partially sequenced 3000-bp clones of the nuclear ribosomal DNA internal transcribed spacer (ITS) region for 16 taxa from subsect. Cembroides and nine representatives from four other subsections of subgenus Strobus. Restriction digests of clones reveal within-individual heterogeneity, suggesting that concerted evolution is operating slowly on the ITS in pine species. Two ITS clones were identified as pseudogenes. Tandem subrepeats in the ITS1 form stem loops comparable to those in other genera of Pinaceae and may be promoting recombination between rDNA repeats, resulting in ITS1 chimeras. Within the pinyon clade, phylogenetic structure is present, but different clones from the same (or different) individuals of a species are polyphyletic, indicating that coalescence of ITS copies within individual genomes predates evolutionary divergence in the group. At the level of subsection and above, the ITS region corresponds well with morphological and cpDNA evidence. Except for P. nelsonii, the pinyons are monophyletic, with both subsect. Cembroides and P. nelsonii forming a clade with the foxtail and bristlecone pines (subsect. Balfourianae) of western North America.

Dynamo-driven plasmoid formation from a current-sheet instability

DOE PAGES

Ebrahimi, F.

2016-12-15

Axisymmetric current-carrying plasmoids are formed in the presence of nonaxisymmetric fluctuations during nonlinear three-dimensional resistive MHD simulations in a global toroidal geometry. In this study, we utilize the helicity injection technique to form an initial poloidal flux in the presence of a toroidal guide field. As helicity is injected, two types of current sheets are formed from the oppositely directed field lines in the injector region (primary reconnecting current sheet), and the poloidal flux compression near the plasma edge (edge current sheet). We first find that nonaxisymmetric fluctuations arising from the current-sheet instability isolated near the plasma edge have tearingmore » parity but can nevertheless grow fast (on the poloidal Alfven time scale). These modes saturate by breaking up the current sheet. Second, for the first time, a dynamo poloidal flux amplification is observed at the reconnection site (in the region of the oppositely directed magnetic field). This fluctuation-induced flux amplification increases the local Lundquist number, which then triggers a plasmoid instability and breaks the primary current sheet at the reconnection site. Finally, the plasmoids formation driven by large-scale flux amplification, i.e., a large-scale dynamo, observed here has strong implications for astrophysical reconnection as well as fast reconnection events in laboratory plasmas.« less

Deletion of ETS-1, a gene in the Jacobsen syndrome critical region, causes ventricular septal defects and abnormal ventricular morphology in mice

PubMed Central

Ye, Maoqing; Coldren, Chris; Liang, Xingqun; Mattina, Teresa; Goldmuntz, Elizabeth; Benson, D. Woodrow; Ivy, Dunbar; Perryman, M.B.; Garrett-Sinha, Lee Ann; Grossfeld, Paul

2010-01-01

Congenital heart defects comprise the most common form of major birth defects, affecting 0.7% of all newborn infants. Jacobsen syndrome (11q-) is a rare chromosomal disorder caused by deletions in distal 11q. We have previously determined that a wide spectrum of the most common congenital heart defects occur in 11q-, including an unprecedented high frequency of hypoplastic left heart syndrome (HLHS). We identified an ∼7 Mb ‘cardiac critical region’ in distal 11q that contains a putative causative gene(s) for congenital heart disease. In this study, we utilized chromosomal microarray mapping to characterize three patients with 11q- and congenital heart defects that carry interstitial deletions overlapping the 7 Mb cardiac critical region. We propose that this 1.2 Mb region of overlap harbors a gene(s) that causes at least a subset of the congenital heart defects that occur in 11q-. We demonstrate that one gene in this region, ETS-1 (a member of the ETS family of transcription factors), is expressed in the endocardium and neural crest during early mouse heart development. Gene-targeted deletion of ETS-1 in mice in a C57/B6 background causes, with high penetrance, large membranous ventricular septal defects and a bifid cardiac apex, and less frequently a non-apex-forming left ventricle (one of the hallmarks of HLHS). Our results implicate an important role for the ETS-1 transcription factor in mammalian heart development and should provide important insights into some of the most common forms of congenital heart disease. PMID:19942620

Developmental origin of the clavicle, and its implications for the evolution of the neck and the paired appendages in vertebrates.

PubMed

Nagashima, Hiroshi; Sugahara, Fumiaki; Watanabe, Keisuke; Shibata, Masahiro; Chiba, Akina; Sato, Noboru

2016-10-01

In fish, the pectoral appendage is adjacent to the head, but during vertebrate evolution a long neck region emerged via caudal relocation of the pectoral appendage. The pectoral appendage is comprised of endochondral portions, such as the humerus and the scapula, and a dermal portion, such as the clavicle, that contributes to the shoulder girdle. In the search for clues to the mechanism of the caudal relocation of the pectoral appendage, the cell lineage of the rostral lateral plate mesoderm was analyzed in chickens. It was found that, despite the long neck region in chickens, the origin of the clavicle attached to the head mesoderm ranged between 1 and 14 somite levels. Because the pectoral limb bud and the endochondral pectoral appendage developed on 15-20 and 15-24 somite levels, respectively, the clavicle-forming region corresponds to the embryonic neck, which suggests that the relocation would have been executed by the expansion of the source of the clavicle. The rostral portion of the clavicle-forming region overlaps the source of the cucullaris muscle, embraces the pharyngeal arches caudally, and can be experimentally replaced with the head mesoderm to form the cucullaris muscle, which implies that the mesodermal portion could have been the head mesoderm and that the clavicle would have developed at the head/trunk boundary. The link between the head mesoderm and the presumptive clavicle appears to have been the developmental constraint needed to create the evolutionarily conserved musculoskeletal connectivities characterizing the gnathostome neck. In this sense, the dermal girdle of the ganathostomes would represent the wall of the branchial chamber into which the endochondral pectoral appendage appears to have attached since its appearance in evolution. © 2016 Anatomical Society.

Unprecedented Proliferation of Novel Pelagic Sargassum Form has Implications for Ecosystem Function and Regional Diversity in the Caribbean

NASA Astrophysics Data System (ADS)

Siuda, A. N.; Schell, J. M.; Goodwin, D. S.

2016-02-01

Pelagic Sargassum is a planktonic macroalgae comprised of two species, S. fluitans and S. natans, each exhibiting a variety of morphological forms; it is found throughout the North Atlantic, Caribbean Sea, and Gulf of Mexico. Drifting open ocean Sargassum provides essential habitat and food resources to organisms across multiple trophic levels, from resident shrimp to migratory sea turtles. Historic observations, including Sea Education Association's (SEA) 22-year field sampling dataset, indicate that S. natans-I and S. fluitans-III are most common and that S. natans-VIII is rare. Furthermore, SEA's long-term record shows very low pelagic Sargassum abundance in the Eastern Caribbean in contrast to the Sargasso Sea. During April 2014, Sargassum began washing ashore along Caribbean coastlines in unprecedented quantities. Shipboard observations of the recent inundation event occurred November 2014 to May 2015. In total, 30.5 kg of pelagic Sargassum was collected in 92.6% of surface neuston tows, sorted and weighed by morphological form. Notably, the predominant Sargassum form observed during the 2014/15 event is S. natans-VIII, a documented change in Sargassum diversity. Strong spatial patterns were also observed, with S. natans-VIII dominant in the Western Tropical Atlantic (87.3% wet weight) and Eastern Caribbean (95.3% wet weight) and S. natans-I most common in the South Sargasso Sea (87.5% wet weight). S. fluitans-III was observed in low abundance across all regions. These sudden assemblage and abundance changes, the biophysical mechanisms of which are not yet understood, have significant ecological consequences at multiple scales. Impacts to associated mobile fauna diversity and community structure, dependent fisheries and iconic species, and coastal ecosystem function will echo throughout the Caribbean, and should comprise focal areas of future research efforts across the region.

Geological and Tectonic Evidence for the Formation and Extensional Collapse of the West Antarctic Plateau: Implications for the Formation of the West Antarctic Rift System and the Transantarctic Mountains

NASA Astrophysics Data System (ADS)

Fitzgerald, P. G.; Studinger, M.; Bialas, R. W.; Buck, W.

2007-12-01

The Transantarctic Mountains (TAM), the world's longest and highest non-contractional intracontinental mountain belt, define the western boundary of the West Antarctic rift system (WARS). The WARS is a broad region of extended continental lithosphere, ca. 750-1000 km wide, lying dominantly below sea-level. A new model (Bialas et al., 2007), proposes that a region of thickened continental crust and high-standing topography, the "West Antarctic Plateau", underwent extensional collapse to leave a remnant edge representing the proto-TAM. Tectonic and paleogeographic reconstructions indicate the plateau formed inboard of a continental arc along the paleo- Pacific margin of Antarctica, active throughout the Paleozoic until the late Mesozoic. This high-standing region was responsible for confining sediments (Beacon Supergroup) to elongate basins along the length of the TAM. Much of the present region of the WARS has been correlated with the Lachlan Fold belt of southeastern Australia. This belt formed from the Ordovician to Carboniferous during back-arc basin formation associated with slab roll- back with short periods of compression. Convergence along the paleo-Pacific margin, perhaps enhanced by subduction of more buoyant oceanic lithosphere as the Phoenix-Pacific ridge was obliquely subducted, resulted in crustal thickening and formation of high-standing terrain (the plateau). Extensional collapse of the plateau most likely began in the Jurassic during initial rifting between East and West Antarctica, but was mainly accomplished during distributed rifting in the Cretaceous (ca. 105-85) following subduction of the Phoenix-Pacific ridge and prior to the separation of New Zealand from Marie Byrd Land. Continued formation of the TAM continued in the Cenozoic concomitant with extension in the WARS that was localized along its western margin adjacent to the TAM. Glacial erosion in the Oligocene and early-Miocene enhanced peak height in the TAM. In this presentation we discuss the diverse geological, geophysical, thermochronological and tectonic evidence for the West Antarctic Plateau and the implications for the formation of the Transantarctic Mountains.

A comparison of the regional slope characteristics of Venus and earth - Implications for geologic processes on Venus

NASA Technical Reports Server (NTRS)

Sharpton, V. L.; Head, J. W., III

1986-01-01

The range of 3 degree by 3 degree regional slopes of the Earth and Venus is similar (approximately 0.0-2.4 degrees), although the surface distribution of these values differs significantly. On earth, cratonic and abyssal plains form extensive regions of 0.0 degree slope. Within these regions a variety of features (mid-ocean ridges, volcanic island chains, subduction zones, and floded mountains) have regional slope characteristics influenced by seafloor spreading and plate recycling, as well as an active weathering regime. The plains provinces of Venus are much more rugged than earth's plains and are marked by numerous closely spaced circular and linear features (0.1-0.2 degree regional slope) concentrated into broad linear zones of global extent. Although Venus highlands are bounded by narrow zones of relatively steep slope, the margins of Aphrodite Terra and Beta Regio are not as steep as earth's continental margins and appear to be best developed parallel to the trends of major chasmata within these regions. Ishtar Terra's margins are significantly steeper and more continuous than other highland margins and are comparable to passive margins on earth. The Venus highlands do not contain appreciable smooth, flat interior regions, implying that highland topography is not significantly modified by erosion or deposition.

Protein protein interactions: organization, cooperativity and mapping in a bottom-up Systems Biology approach

NASA Astrophysics Data System (ADS)

Keskin, Ozlem; Ma, Buyong; Rogale, Kristina; Gunasekaran, K.; Nussinov, Ruth

2005-06-01

Understanding and ultimately predicting protein associations is immensely important for functional genomics and drug design. Here, we propose that binding sites have preferred organizations. First, the hot spots cluster within densely packed 'hot regions'. Within these regions, they form networks of interactions. Thus, hot spots located within a hot region contribute cooperatively to the stability of the complex. However, the contributions of separate, independent hot regions are additive. Moreover, hot spots are often already pre-organized in the unbound (free) protein states. Describing a binding site through independent local hot regions has implications for binding site definition, design and parametrization for prediction. The compactness and cooperativity emphasize the similarity between binding and folding. This proposition is grounded in computation and experiment. It explains why summation of the interactions may over-estimate the stability of the complex. Furthermore, statistically, charge-charge coupling of the hot spots is disfavored. However, since within the highly packed regions the solvent is screened, the electrostatic contributions are strengthened. Thus, we propose a new description of protein binding sites: a site consists of (one or a few) self-contained cooperative regions. Since the residue hot spots are those conserved by evolution, proteins binding multiple partners at the same sites are expected to use all or some combination of these regions.

The Theory and Practice of Genre Criticism: Genre Criticism: The Analysis of Form, Part I; Genre Criticism: Judgment Argument and Evidence, Part II; [and] Genre Criticism: A Topical Bibliography, Part III.

ERIC Educational Resources Information Center

Creps, Earl

A three-part study of the forms of rhetorical criticism is offered. Part one reviews the nature of genre criticism, enumerates several concepts of form and the types of genre criticism they produce, and discusses the implications of this relationship between form and genre. Part two is an essay on the methodological implications of form-grounded…

Neuropsychology of prefrontal cortex

PubMed Central

Siddiqui, Shazia Veqar; Chatterjee, Ushri; Kumar, Devvarta; Siddiqui, Aleem; Goyal, Nishant

2008-01-01

The history of clinical frontal lobe study is long and rich which provides valuable insights into neuropsychologic determinants of functions of prefrontal cortex (PFC). PFC is often classified as multimodal association cortex as extremely processed information from various sensory modalities is integrated here in a precise fashion to form the physiologic constructs of memory, perception, and diverse cognitive processes. Human neuropsychologic studies also support the notion of different functional operations within the PFC. The specification of the component ‘executive’ processes and their localization to particular regions of PFC have been implicated in a wide variety of psychiatric disorders. PMID:19742233

Apport de la gravimétrie à l'étude de la structure du bassin des Triffa (Maroc nord-oriental) : implications hydrogéologiques

NASA Astrophysics Data System (ADS)

Khattach, Driss; Keating, Pierre; Mili, El Mostafa; Chennouf, Touria; Andrieux, Pierre; Milhi, Abdellah

2004-12-01

Various techniques (horizontal and vertical derivatives, upward continuation, Euler deconvolution) have been applied to the gravity data from the Triffa's plain and the north flank of the Beni-Snassen massif to delineate various major geological structures such as faults and basins. These results allow the production of a structural map showing the fault systems for the survey area. This map forms the basis for planning future hydrogeological research in this region. To cite this article: D. Khattach et al., C. R. Geoscience 336 (2004).

Water Supply Deficiency and Implications for Rural Development in the Niger-Delta Region of Nigeria

ERIC Educational Resources Information Center

Nkwocha, E. E.

2009-01-01

There is a growing concern about the marginalization of the Niger Delta region of Nigeria in terms of infrastructural and social services provision. This study examined the water supply deficiency and its general implications for rural development within the region. Data and other study characteristics were extracted from 501 subjects drawn from…

N-terminal domains of fibrillin 1 and fibrillin 2 direct the formation of homodimers: a possible first step in microfibril assembly.

PubMed Central

Trask, T M; Ritty, T M; Broekelmann, T; Tisdale, C; Mecham, R P

1999-01-01

Aggregation of fibrillin molecules via disulphide bonds is postulated to be an early step in microfibril assembly. By expressing fragments of fibrillin 1 and fibrillin 2 in a mammalian expression system, we found that the N-terminal region of each protein directs the formation of homodimers and that disulphide bonds stabilize this interaction. A large fragment of fibrillin 1 containing much of the region downstream from the N-terminus remained as a monomer when expressed in the same cell system, indicating that this region of the protein lacks dimerization domains. This finding also confirms that the overexpression of fibrillin fragments does not in itself lead to spurious dimer formation. Pulse-chase analysis demonstrated that dimer formation occurred intracellularly, suggesting that the process of fibrillin aggregation is initiated early after biosynthesis of the molecules. These findings also implicate the N-terminal region of fibrillin 1 and fibrillin 2 in directing the formation of a dimer intermediate that aggregates to form the functional microfibril. PMID:10359653

The global distribution of giant radiating dike swarms on Venus: Implications for the global stress state

NASA Astrophysics Data System (ADS)

Grosfils, E. B.; Head, J. W.

1994-04-01

Magellan radar data of Venus reveal 163 large radial lineament systems composed of graben, fissure, and fracture elements. On the basis of their structure, plan view geometry, and volcanic associations, at least 72% are interpreted to have formed primarily through subsurface dike swarm emplacement, the remainder through uplift or a combination of these two mechanisms. The population of swarms is used to determine regional and global stress orientation. The stress configuration recorded from 330-210 deg E (Aphrodite Terra) is best explained by isostatic compensation of existing long wavelength topography or coupling between mantle flow and the lithosphere. The rest are correlated with concentrations of rifting and volcanism in the Beta-Atla-Themis region. The global stress field on Venus is different than that of Earth, where plate boundary forces dominate.

The global distribution of giant radiating dike swarms on Venus: Implications for the global stress state

NASA Technical Reports Server (NTRS)

Grosfils, Eric B.; Head, James W.

1994-01-01

Magellan radar data of Venus reveal 163 large radial lineament systems composed of graben, fissure, and fracture elements. On the basis of their structure, plan view geometry, and volcanic associations, at least 72% are interpreted to have formed primarily through subsurface dike swarm emplacement, the remainder through uplift or a combination of these two mechanisms. The population of swarms is used to determine regional and global stress orientation. The stress configuration recorded from 330-210 deg E (Aphrodite Terra) is best explained by isostatic compensation of existing long wavelength topography or coupling between mantle flow and the lithosphere. The rest are correlated with concentrations of rifting and volcanism in the Beta-Atla-Themis region. The global stress field on Venus is different than that of Earth, where plate boundary forces dominate.

Plasma Equilibrium in a Magnetic Field with Stochastic Regions

DOE Office of Scientific and Technical Information (OSTI.GOV)

J.A. Krommes and Allan H. Reiman

The nature of plasma equilibrium in a magnetic field with stochastic regions is examined. It is shown that the magnetic differential equation that determines the equilibrium Pfirsch-Schluter currents can be cast in a form similar to various nonlinear equations for a turbulent plasma, allowing application of the mathematical methods of statistical turbulence theory. An analytically tractable model, previously studied in the context of resonance-broadening theory, is applied with particular attention paid to the periodicity constraints required in toroidal configurations. It is shown that even a very weak radial diffusion of the magnetic field lines can have a significant effect onmore » the equilibrium in the neighborhood of the rational surfaces, strongly modifying the near-resonant Pfirsch-Schluter currents. Implications for the numerical calculation of 3D equilibria are discussed« less

High-Resolution Optical and Near-Infrared Imaging of Young Circumstellar Disks

NASA Technical Reports Server (NTRS)

McCaughrean, Mark; Stapelfeldt, Karl; Close, Laird

2000-01-01

In the past five years, observations at optical and near-infrared wavelengths obtained with the Hubble Space Telescope and ground-based adaptive optics have provided the first well-resolved images of young circumstellar disks which may form planetary systems. We review these two observational techniques and highlight their results by presenting prototype examples of disks imaged in the Taurus-Auriga and Orion star-forming regions. As appropriate, we discuss the disk parameters that may be typically derived from the observations, as well as the implications that the observations may have on our understanding of, for example, the role of the ambient environment in shaping the disk evolution. We end with a brief summary of the prospects for future improvements in space- and ground-based optical/IR imaging techniques, and how they may impact disk studies.

Spectroscopic Characterization of Mineralogy Across Vesta: Evidence of Different Lithologies

NASA Technical Reports Server (NTRS)

De Sanotis, M. C.; Ammannito, E.; Filacchione, G.; Capria, M. T.; Tosi, F.; Capaccioni, F.; Zambon, F.; Carraro, F.; Fonte, S.; Frigeri, A.;

Topographic variations in chaos on Europa: Implications for diapiric formation

NASA Technical Reports Server (NTRS)

Schenk, Paul M.; Pappalardo, Robert T.

2004-01-01

Disrupted terrain, or chaos, on Europa, might have formed through melting of a floating ice shell from a subsurface ocean [Cam et al., 1998; Greenberg et al., 19991, or breakup by diapirs rising from the warm lower portion of the ice shell [Head and Pappalardo, 1999; Collins et al., 20001. Each model makes specific and testable predictions for topographic expression within chaos and relative to surrounding terrains on local and regional scales. High-resolution stereo-controlled photoclinometric topography indicates that chaos topography, including the archetypal Conamara Chaos region, is uneven and commonly higher than surrounding plains by up to 250 m. Elevated and undulating topography is more consistent with diapiric uplift of deep material in a relatively thick ice shell, rather than melt-through and refreezing of regionally or globally thin ice by a subsurface ocean. Vertical and horizontal scales of topographic doming in Conamara Chaos are consistent with a total ice shell thickness >15 km. Contact between Europa's ocean and surface may most likely be indirectly via diapirism or convection.

Topographic variations in chaos on Europa: Implications for diapiric formation

NASA Astrophysics Data System (ADS)

Schenk, Paul M.; Pappalardo, Robert T.

2004-08-01

Disrupted terrain, or chaos, on Europa, might have formed through melting of a floating ice shell from a subsurface ocean [Carr et al., 1998; Greenberg et al., 1999], or breakup by diapirs rising from the warm lower portion of the ice shell [Head and Pappalardo, 1999; Collins et al., 2000]. Each model makes specific and testable predictions for topographic expression within chaos and relative to surrounding terrains on local and regional scales. High-resolution stereo-controlled photoclinometric topography indicates that chaos topography, including the archetypal Conamara Chaos region, is uneven and commonly higher than surrounding plains by up to 250 m. Elevated and undulating topography is more consistent with diapiric uplift of deep material in a relatively thick ice shell, rather than melt-through and refreezing of regionally or globally thin ice by a subsurface ocean. Vertical and horizontal scales of topographic doming in Conamara Chaos are consistent with a total ice shell thickness >15 km. Contact between Europa's ocean and surface may most likely be indirectly via diapirism or convection.

Fine-scale mapping of a locus for severe bipolar mood disorder on chromosome 18p11.3 in the Costa Rican population

PubMed Central

McInnes, L. Alison; Service, Susan K.; Reus, Victor I.; Barnes, Glenn; Charlat, Olga; Jawahar, Satya; Lewitzky, Steve; Yang, Qing; Duong, Quyen; Spesny, Mitzi; Araya, Carmen; Araya, Xinia; Gallegos, Alvaro; Meza, Luis; Molina, Julio; Ramirez, Rolando; Mendez, Roxana; Silva, Sandra; Fournier, Eduardo; Batki, Steven L.; Mathews, Carol A.; Neylan, Thomas; Glatt, Charles E.; Escamilla, Michael A.; Luo, David; Gajiwala, Paresh; Song, Terry; Crook, Stephen; Nguyen, Jasmine B.; Roche, Erin; Meyer, Joanne M.; Leon, Pedro; Sandkuijl, Lodewijk A.; Freimer, Nelson B.; Chen, Hong

2001-01-01

We have searched for genes predisposing to bipolar disorder (BP) by studying individuals with the most extreme form of the affected phenotype, BP-I, ascertained from the genetically isolated population of the Central Valley of Costa Rica (CVCR). The results of a previous linkage analysis on two extended CVCR BP-I pedigrees, CR001 and CR004, and of linkage disequilibrium (LD) analyses of a CVCR population sample of BP-I patients implicated a candidate region on 18p11.3. We further investigated this region by creating a physical map and developing 4 new microsatellite and 26 single-nucleotide polymorphism markers for typing in the pedigree and population samples. We report the results of fine-scale association analyses in the population sample, as well as evaluation of haplotypes in pedigree CR001. Our results suggest a candidate region containing six genes but also highlight the complexities of LD mapping of common disorders. PMID:11572994

A view to the future of natural gas and electricity: An integrated modeling approach

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cole, Wesley J.; Medlock, Kenneth B.; Jani, Aditya

This paper demonstrates the value of integrating two highly spatially resolved models: the Rice World Gas Trade Model (RWGTM) of the natural gas sector and the Regional Energy Deployment System (ReEDS) model of the U.S. electricity sector. The RWGTM passes electricity-sector natural gas prices to the ReEDS model, while the ReEDS model returns electricity-sector natural gas demand to the RWGTM. The two models successfully converge to a solution under reference scenario conditions. We present electricity-sector and natural gas sector evolution using the integrated models for this reference scenario. This paper demonstrates that the integrated models produced similar national-level results asmore » when running in a stand-alone form, but that regional and state-level results can vary considerably. As we highlight, these regional differences have potentially significant implications for electric sector planners especially in the wake of substantive policy changes for the sector (e.g., the Clean Power Plan).« less

Association of reading disability on chromosome 6p22 in the Afrikaner population.

PubMed

Platko, Jill V; Wood, Frank B; Pelser, Izelda; Meyer, Marianne; Gericke, George S; O'Rourke, Julia; Birns, Julie; Purcell, Shaun; Pauls, David L

2008-10-05

The genetic basis of reading disability (RD) has long been established through family and twin studies. More recently genetic linkage studies have identified genomic regions that appear to harbor susceptibility genes for RD. Association studies have been shown to have greater power for detecting genes of modest effect, particularly in genetically isolated populations. Hence, a case control study of RD was undertaken in the Afrikaner population in South Africa. Sixty-eight microsatellite markers in regions where linkages had been reported in previous studies were genotyped on 122 children with reading disability and 112 typically reading controls drawn from the same school population. A single allele of marker D6S299 showed a highly significant association with the RD phenotype (D6S299[229], P-value 0.000014). Other markers on other chromosomes also showed suggestive associations. Of particular interest were markers on chromosomes 1 and 15. These two regions have been implicated in studies of populations that formed the founding population in the Afrikaner population.

A view to the future of natural gas and electricity: An integrated modeling approach

DOE PAGES

Cole, Wesley J.; Medlock, Kenneth B.; Jani, Aditya

2016-03-17

This paper demonstrates the value of integrating two highly spatially resolved models: the Rice World Gas Trade Model (RWGTM) of the natural gas sector and the Regional Energy Deployment System (ReEDS) model of the U.S. electricity sector. The RWGTM passes electricity-sector natural gas prices to the ReEDS model, while the ReEDS model returns electricity-sector natural gas demand to the RWGTM. The two models successfully converge to a solution under reference scenario conditions. We present electricity-sector and natural gas sector evolution using the integrated models for this reference scenario. This paper demonstrates that the integrated models produced similar national-level results asmore » when running in a stand-alone form, but that regional and state-level results can vary considerably. As we highlight, these regional differences have potentially significant implications for electric sector planners especially in the wake of substantive policy changes for the sector (e.g., the Clean Power Plan).« less

Discovery of novel targets for multi-epitope vaccines: Screening of HIV-1 genomes using association rule mining

PubMed Central

Paul, Sinu; Piontkivska, Helen

2009-01-01

Background Studies have shown that in the genome of human immunodeficiency virus (HIV-1) regions responsible for interactions with the host's immune system, namely, cytotoxic T-lymphocyte (CTL) epitopes tend to cluster together in relatively conserved regions. On the other hand, "epitope-less" regions or regions with relatively low density of epitopes tend to be more variable. However, very little is known about relationships among epitopes from different genes, in other words, whether particular epitopes from different genes would occur together in the same viral genome. To identify CTL epitopes in different genes that co-occur in HIV genomes, association rule mining was used. Results Using a set of 189 best-defined HIV-1 CTL/CD8+ epitopes from 9 different protein-coding genes, as described by Frahm, Linde & Brander (2007), we examined the complete genomic sequences of 62 reference HIV sequences (including 13 subtypes and sub-subtypes with approximately 4 representative sequences for each subtype or sub-subtype, and 18 circulating recombinant forms). The results showed that despite inclusion of recombinant sequences that would be expected to break-up associations of epitopes in different genes when two different genomes are recombined, there exist particular combinations of epitopes (epitope associations) that occur repeatedly across the world-wide population of HIV-1. For example, Pol epitope LFLDGIDKA is found to be significantly associated with epitopes GHQAAMQML and FLKEKGGL from Gag and Nef, respectively, and this association rule is observed even among circulating recombinant forms. Conclusion We have identified CTL epitope combinations co-occurring in HIV-1 genomes including different subtypes and recombinant forms. Such co-occurrence has important implications for design of complex vaccines (multi-epitope vaccines) and/or drugs that would target multiple HIV-1 regions at once and, thus, may be expected to overcome challenges associated with viral escape. PMID:19580659

Direct Measurement of Dust Attenuation in z approx. 1.5 Star-Forming Galaxies from 3D-HST: Implications for Dust Geometry and Star Formation Rates

NASA Technical Reports Server (NTRS)

Price, Sedona H.; Kriek, Mariska; Brammer, Gabriel B; Conroy, Charlie; Schreiber, Natascha M. Foerster; Franx, Marijn; Fumagalli, Mattia; Lundren, Britt; Momcheva, Ivelina; Nelson, Erica J.;

Mechanism of IAPP amyloid fibril formation involves an intermediate with a transient β-sheet

PubMed Central

Buchanan, Lauren E.; Dunkelberger, Emily B.; Tran, Huong Q.; Cheng, Pin-Nan; Chiu, Chi-Cheng; Cao, Ping; Raleigh, Daniel P.; de Pablo, Juan J.; Nowick, James S.; Zanni, Martin T.

2013-01-01

Amyloid formation is implicated in more than 20 human diseases, yet the mechanism by which fibrils form is not well understood. We use 2D infrared spectroscopy and isotope labeling to monitor the kinetics of fibril formation by human islet amyloid polypeptide (hIAPP or amylin) that is associated with type 2 diabetes. We find that an oligomeric intermediate forms during the lag phase with parallel β-sheet structure in a region that is ultimately a partially disordered loop in the fibril. We confirm the presence of this intermediate, using a set of homologous macrocyclic peptides designed to recognize β-sheets. Mutations and molecular dynamics simulations indicate that the intermediate is on pathway. Disrupting the oligomeric β-sheet to form the partially disordered loop of the fibrils creates a free energy barrier that is the origin of the lag phase during aggregation. These results help rationalize a wide range of previous fragment and mutation studies including mutations in other species that prevent the formation of amyloid plaques. PMID:24218609

The FBXO7 homologue nutcracker and binding partner PI31 in Drosophila melanogaster models of Parkinson's disease.

PubMed

Merzetti, Eric M; Dolomount, Lindsay A; Staveley, Brian E

2017-01-01

Parkinsonian-pyramidal syndrome (PPS) is an early onset form of Parkinson's disease (PD) that shows degeneration of the extrapyramidal region of the brain to result in a severe form of PD. The toxic protein build-up has been implicated in the onset of PPS. Protein removal is mediated by an intracellular proteasome complex: an E3 ubiquitin ligase, the targeting component, is essential for function. FBXO7 encodes the F-box component of the SCF E3 ubiquitin ligase linked to familial forms of PPS. The Drosophila melanogaster homologue nutcracker (ntc) and a binding partner, PI31, have been shown to be active in proteasome function. We show that altered expression of either ntc or PI31 in dopaminergic neurons leads to a decrease in longevity and locomotor ability, phenotypes both associated with models of PD. Furthermore, expression of ntc-RNAi in an established α-synuclein-dependent model of PD rescues the phenotypes of diminished longevity and locomotor control.

Molecular systematics and historical biogeography of tree boas (Corallus spp.).

PubMed

Colston, Timothy J; Grazziotin, Felipe G; Shepard, Donald B; Vitt, Laurie J; Colli, Guarino R; Henderson, Robert W; Blair Hedges, S; Bonatto, Sandro; Zaher, Hussam; Noonan, Brice P; Burbrink, Frank T

2013-03-01

Inferring the evolutionary and biogeographic history of taxa occurring in a particular region is one way to determine the processes by which the biodiversity of that region originated. Tree boas of the genus Corallus are an ancient clade and occur throughout Central and South America and the Lesser Antilles, making it an excellent group for investigating Neotropical biogeography. Using sequenced portions of two mitochondrial and three nuclear loci for individuals of all recognized species of Corallus, we infer phylogenetic relationships, present the first molecular analysis of the phylogenetic placement of the enigmatic C. cropanii, develop a time-calibrated phylogeny, and explore the biogeographic history of the genus. We found that Corallus diversified within mainland South America, via over-water dispersals to the Lesser Antilles and Central America, and via the traditionally recognized Panamanian land bridge. Divergence time estimates reject the South American Caribbean-Track as a general biogeographic model for Corallus and implicate a role for events during the Oligocene and Miocene in diversification such as marine incursions and the uplift of the Andes. Our findings also suggest that recognition of the island endemic species, C. grenadensis and C. cookii, is questionable as they are nested within the widely distributed species, C. hortulanus. Our results highlight the importance of using widespread taxa when forming and testing biogeographic hypotheses in complex regions and further illustrate the difficulty of forming broadly applicable hypotheses regarding patterns of diversification in the Neotropical region. Copyright © 2012 Elsevier Inc. All rights reserved.

A preference for mathematical processing outweighs the selectivity for Arabic numbers in the inferior temporal gyrus.

PubMed

Grotheer, Mareike; Jeska, Brianna; Grill-Spector, Kalanit

2018-03-28

A region in the posterior inferior temporal gyrus (ITG), referred to as the number form area (NFA, here ITG-numbers) has been implicated in the visual processing of Arabic numbers. However, it is unknown if this region is specifically involved in the visual encoding of Arabic numbers per se or in mathematical processing more broadly. Using functional magnetic resonance imaging (fMRI) during experiments that systematically vary tasks and stimuli, we find that mathematical processing, not preference to Arabic numbers, consistently drives both mean and distributed responses in the posterior ITG. While we replicated findings of higher responses in ITG-numbers to numbers than other visual stimuli during a 1-back task, this preference to numbers was abolished when participants engaged in mathematical processing. In contrast, an ITG region (ITG-math) that showed higher responses during an adding task vs. other tasks maintained this preference for mathematical processing across a wide range of stimuli including numbers, number/letter morphs, hands, and dice. Analysis of distributed responses across an anatomically-defined posterior ITG expanse further revealed that mathematical task but not Arabic number form can be successfully and consistently decoded from these distributed responses. Together, our findings suggest that the function of neuronal regions in the posterior ITG goes beyond the specific visual processing of Arabic numbers. We hypothesize that they ascribe numerical content to the visual input, irrespective of the format of the stimulus. Copyright © 2018 Elsevier Inc. All rights reserved.

The place character as land use change determinant in Deli Serdang

NASA Astrophysics Data System (ADS)

Lindarto, D.; Sirojuzilam; Badaruddin; Aulia, DN

2018-03-01

The Mebidangro concept of development (Medan, Binjai, Deli Serdang, Karo) in Sumatera Utara creating peri urban area in region hinterland Medan city especially in Tembung village, Percut Sei Tuan District. This peri urban area is a conjunction of several rural-urban activities that forming a friendly atmosphere. The dynamic of population structure shows occurrence the sprawl of land use change condition. In the site of the urban region showing the unique performance that built the place character. The aim of the study is to uncover the place character as one of land use change determinant factors. The study conducted with quantitative approach intended at obtaining variables which describing several factors forming land use change. Descriptive approach give an idea, justification, and fact-finding with correct interpretation. Data collected through a purposive sampling of 320 respondents who stay and built the building and land between 2010 till 2014. With overlay figure/ground technique, scoring analysis, descriptive quantitative and SEM (Structural Equational Models) gained a result that urban heritage (p=0,008) potentially as one of the main land use change driving factors besides accessibility (p=0,039), infrastructure (p=0,010), social-economic (p=0,038) in fact topographic factor (p=0,663) was inversely potentially. The implication of the findings is required intensive attention toward the form of place character (mosque, the quarter, district activity, peri urban edges city and railway) as determinant factors of land use change considering forming the identity of the rapid change in land use transformation.

Functional genomics of gam56: characterisation of the role of a 56 kilodalton sexual stage antigen in oocyst wall formation in Eimeria maxima.

PubMed

Belli, Sabina I; Witcombe, David; Wallach, Michael G; Smith, Nicholas C

2002-12-19

Gam56 (M(r) 56,000) is an antigen found in the sexual (macrogametocyte) stage of the intestinal parasite Eimeria maxima that is implicated in protective immunity. The gene (gam56) encoding this protein was cloned and sequenced. It is a single-copy, intronless gene, that localises to a 1,754 bp transcript, and is first detected at 120 h p.i. The gene predicts two distinct protein domains; a tyrosine-serine rich region, composed of amino acids implicated in oocyst wall formation in Eimeria spp., and a proline-methionine rich region often detected in extensins, protein components of plant cell walls. The tyrosine-serine rich region predicts a secondary structure commonly seen in the structural protein fibroin, a component of the cocoon of the caterpillar Bombyx mori. The inference that gam56 is a structural component of the oocyst wall was confirmed when a specific antibody to gam56 recognised the wall forming bodies in macrogametocytes, and the walls of oocysts and sporocysts. Together, these data identify a developmentally regulated, sexual stage gene in E. maxima that shares primary and secondary structure features in common with intrinsic structural proteins in other parasites such as Schistosoma mansoni and Fasciola hepatica, and other organisms across different phyla, including the caterpillar Bombyx mori. In addition, these findings provide evidence for the molecular mechanisms underlying oocyst wall formation in Eimeria and the role of gametocyte antigens in this process.

Eastern Thought and Movement Forms: Possible Implications for Western Sport.

ERIC Educational Resources Information Center

Case, Bob

1984-01-01

Eastern thought and movement forms can serve as a model for Western sports. Possible implications for physical education that stem from Eastern philosophic beliefs include practical and utilitarian concerns, hidden dimensions, metaphysical concerns, competition concerns, and pedagogical concerns. (DF)

Extended asymmetric hot region formation due to shockwave interactions following void collapse in shocked high explosive

NASA Astrophysics Data System (ADS)

Shan, Tzu-Ray; Wixom, Ryan R.; Thompson, Aidan P.

2016-08-01

In both continuum hydrodynamics simulations and also multimillion atom reactive molecular dynamics simulations of shockwave propagation in single crystal pentaerythritol tetranitrate (PETN) containing a cylindrical void, we observed the formation of an initial radially symmetric hot spot. By extending the simulation time to the nanosecond scale, however, we observed the transformation of the small symmetric hot spot into a longitudinally asymmetric hot region extending over a much larger volume. Performing reactive molecular dynamics shock simulations using the reactive force field (ReaxFF) as implemented in the LAMMPS molecular dynamics package, we showed that the longitudinally asymmetric hot region was formed by coalescence of the primary radially symmetric hot spot with a secondary triangular hot zone. We showed that the triangular hot zone coincided with a double-shocked region where the primary planar shockwave was overtaken by a secondary cylindrical shockwave. The secondary cylindrical shockwave originated in void collapse after the primary planar shockwave had passed over the void. A similar phenomenon was observed in continuum hydrodynamics shock simulations using the CTH hydrodynamics package. The formation and growth of extended asymmetric hot regions on nanosecond timescales has important implications for shock initiation thresholds in energetic materials.

Learning-dependent plasticity with and without training in the human brain.

PubMed

Zhang, Jiaxiang; Kourtzi, Zoe

2010-07-27

Long-term experience through development and evolution and shorter-term training in adulthood have both been suggested to contribute to the optimization of visual functions that mediate our ability to interpret complex scenes. However, the brain plasticity mechanisms that mediate the detection of objects in cluttered scenes remain largely unknown. Here, we combine behavioral and functional MRI (fMRI) measurements to investigate the human-brain mechanisms that mediate our ability to learn statistical regularities and detect targets in clutter. We show two different routes to visual learning in clutter with discrete brain plasticity signatures. Specifically, opportunistic learning of regularities typical in natural contours (i.e., collinearity) can occur simply through frequent exposure, generalize across untrained stimulus features, and shape processing in occipitotemporal regions implicated in the representation of global forms. In contrast, learning to integrate discontinuities (i.e., elements orthogonal to contour paths) requires task-specific training (bootstrap-based learning), is stimulus-dependent, and enhances processing in intraparietal regions implicated in attention-gated learning. We propose that long-term experience with statistical regularities may facilitate opportunistic learning of collinear contours, whereas learning to integrate discontinuities entails bootstrap-based training for the detection of contours in clutter. These findings provide insights in understanding how long-term experience and short-term training interact to shape the optimization of visual recognition processes.

Influence of a large-scale field on energy dissipation in magnetohydrodynamic turbulence

NASA Astrophysics Data System (ADS)

Zhdankin, Vladimir; Boldyrev, Stanislav; Mason, Joanne

2017-07-01

In magnetohydrodynamic (MHD) turbulence, the large-scale magnetic field sets a preferred local direction for the small-scale dynamics, altering the statistics of turbulence from the isotropic case. This happens even in the absence of a total magnetic flux, since MHD turbulence forms randomly oriented large-scale domains of strong magnetic field. It is therefore customary to study small-scale magnetic plasma turbulence by assuming a strong background magnetic field relative to the turbulent fluctuations. This is done, for example, in reduced models of plasmas, such as reduced MHD, reduced-dimension kinetic models, gyrokinetics, etc., which make theoretical calculations easier and numerical computations cheaper. Recently, however, it has become clear that the turbulent energy dissipation is concentrated in the regions of strong magnetic field variations. A significant fraction of the energy dissipation may be localized in very small volumes corresponding to the boundaries between strongly magnetized domains. In these regions, the reduced models are not applicable. This has important implications for studies of particle heating and acceleration in magnetic plasma turbulence. The goal of this work is to systematically investigate the relationship between local magnetic field variations and magnetic energy dissipation, and to understand its implications for modelling energy dissipation in realistic turbulent plasmas.

Pbx3 Deficiency Results in Central Hypoventilation

PubMed Central

Rhee, Joon Whan; Arata, Akiko; Selleri, Licia; Jacobs, Yakop; Arata, Satoru; Onimaru, Hiroshi; Cleary, Michael L.

2004-01-01

Pbx proteins comprise a family of TALE (three amino acid loop extension) class homeodomain transcription factors that are implicated in developmental gene expression through their abilities to form hetero-oligomeric DNA-binding complexes and function as transcriptional regulators in numerous cell types. We demonstrate here that one member of this family, Pbx3, is expressed at high levels predominantly in the developing central nervous system, including a region of the medulla oblongata that is implicated in the control of respiration. Pbx3-deficient mice develop to term but die within a few hours of birth from central respiratory failure due to abnormal activity of inspiratory neurons in the medulla. This partially phenocopies the defect in mice deficient for Rnx, a metaHox homeodomain transcription factor, that we demonstrate here is capable of forming a DNA-binding complex with Pbx3. Rnx expression is unperturbed in Pbx3-deficient mice, but its ability to enhance transcription in vitro as a complex with TALE proteins is compromised in the absence of Pbx3. Thus, Pbx3 is essential for respiration and, like its DNA-binding partner Rnx, is critical for proper development of medullary respiratory control mechanisms. Pbx3-deficient mice provide a model for congenital central hypoventilation syndrome and suggest that Pbx3 mutations may promote the pathogenesis of this disorder. PMID:15466398

Pauling and Corey's alpha-pleated sheet structure may define the prefibrillar amyloidogenic intermediate in amyloid disease.

PubMed

Armen, Roger S; DeMarco, Mari L; Alonso, Darwin O V; Daggett, Valerie

2004-08-10

Transthyretin, beta(2)-microglobulin, lysozyme, and the prion protein are four of the best-characterized proteins implicated in amyloid disease. Upon partial acid denaturation, these proteins undergo conformational change into an amyloidogenic intermediate that can self-assemble into amyloid fibrils. Many experiments have shown that pH-mediated changes in structure are required for the formation of the amyloidogeneic intermediate, but it has proved impossible to characterize these conformational changes at high resolution using experimental means. To probe these conformational changes at atomic resolution, we have performed molecular dynamics simulations of these proteins at neutral and low pH. In low-pH simulations of all four proteins, we observe the formation of alpha-pleated sheet secondary structure, which was first proposed by L. Pauling and R. B. Corey [(1951) Proc. Natl. Acad. Sci. USA 37, 251-256]. In all beta-sheet proteins, transthyretin and beta(2)-microglobulin, alpha-pleated sheet structure formed over the strands that are highly protected in hydrogen-exchange experiments probing amyloidogenic conditions. In lysozyme and the prion protein, alpha-sheets formed in the specific regions of the protein implicated in the amyloidogenic conversion. We propose that the formation of alpha-pleated sheet structure may be a common conformational transition in amyloidosis.

Pauling and Corey's α-pleated sheet structure may define the prefibrillar amyloidogenic intermediate in amyloid disease

PubMed Central

Armen, Roger S.; DeMarco, Mari L.; Alonso, Darwin O. V.; Daggett, Valerie

2004-01-01

Transthyretin, β2-microglobulin, lysozyme, and the prion protein are four of the best-characterized proteins implicated in amyloid disease. Upon partial acid denaturation, these proteins undergo conformational change into an amyloidogenic intermediate that can self-assemble into amyloid fibrils. Many experiments have shown that pH-mediated changes in structure are required for the formation of the amyloidogeneic intermediate, but it has proved impossible to characterize these conformational changes at high resolution using experimental means. To probe these conformational changes at atomic resolution, we have performed molecular dynamics simulations of these proteins at neutral and low pH. In low-pH simulations of all four proteins, we observe the formation of α-pleated sheet secondary structure, which was first proposed by L. Pauling and R. B. Corey [(1951) Proc. Natl. Acad. Sci. USA 37, 251–256]. In all β-sheet proteins, transthyretin and β2-microglobulin, α-pleated sheet structure formed over the strands that are highly protected in hydrogen-exchange experiments probing amyloidogenic conditions. In lysozyme and the prion protein, α-sheets formed in the specific regions of the protein implicated in the amyloidogenic conversion. We propose that the formation of α-pleated sheet structure may be a common conformational transition in amyloidosis. PMID:15280548

Soil emissions of gaseous reactive nitrogen from North American arid lands: an overlooked source.

NASA Astrophysics Data System (ADS)

Sparks, J. P.; McCalley, C. K.; Strahm, B. D.

2008-12-01

The biosphere-atmosphere exchange and transformation of nitrogen has important ramifications for both terrestrial biogeochemistry and atmospheric chemistry. Several important mechanisms within this process (e.g., photochemistry, nitrogen deposition, aerosol formation) are strongly influenced by the emission of reactive nitrogen compounds from the Earth's surface. Therefore, a quantification of emission sources is a high priority for future conceptual understanding. One source largely overlooked in most global treatments are the soil emissions from arid and semi-arid landscapes worldwide. Approximately 35-40% of global terrestrial land cover is aridland and emission of reactive nitrogen from soils in these regions has the potential to strongly influence both regional and global biogeochemistry. Here we present estimates of soil emission of oxidized (NO, total NOy including NO2 and HONO) and reduced (NH3) forms of reactive nitrogen from two North American arid regions: the Mojave Desert and the Colorado Plateau. Soil fluxes in these regions are highly dependent on soil moisture conditions. Soil moisture is largely driven by pulsed rain events with fluxes increasing 20-40 fold after a rain event. Using field measurements made across seasons under an array of moisture conditions, precipitation records, and spatially explicit cover type information we have estimated annual estimates for the Mojave Desert (1.5 ± 0.7 g N ha-1 yr-1), the shale derived (1.4 ± 0.9 g N ha-1 yr-1), and sandy soil derived (2.8 ± 1.2 g N ha-1 yr-1) regions of the Colorado Plateau. The chemical composition of soil emissions varies significantly both with season and soil moisture content. Emissions from dry soils tend to be dominated by ammonia and forms of NOy other than NO. In contrast, NO becomes a dominant portion of the flux post rain events (~30% of the total flux). This variability in chemical form has significant implications for the tropospheric fate of the emitted N. NO and other nitrogen oxides are likely to participate in photochemistry, ozone production, and production of organic nitrates and nitric acid. In contrast, NH3 is likely to locally redeposit or form secondary aerosols in the presence of sulphate. Given the vastly different influence of oxidized versus reduced forms of N on atmospheric chemistry, the variable chemical partitioning of soil emissions based on season and water availability observed in this study is likely to improve the performance of regional photochemistry models.

Analysis of very-high-resolution Galileo images of Europa: Implications for small-scale structure and surface evolution

NASA Astrophysics Data System (ADS)

Leonard, E. J.; Pappalardo, R. T.; Yin, A.; Prockter, L. M.; Patthoff, D. A.

2014-12-01

The Galileo Solid State Imager (SSI) recorded nine very high-resolution frames (8 at 12 m/pixel and 1 at 6 m/pixel) during the E12 flyby of Europa in Dec. 1997. To understand the implications for the small-scale structure and evolution of Europa, we mosaicked these frames (observations 12ESMOTTLE01 and 02, incidence ≈18°, emission ≈77°) into their regional context (part of observation 11ESREGMAP01, 220 m/pixel, incidence ≈74°, emission ≈23°), despite their very different viewing and lighting conditions. We created a map of geological units based on morphology, structure, and albedo along with stereoscopic images where the frames overlapped. The highly diverse units range from: high albedo sub-parallel ridge and grooved terrain; to variegated-albedo hummocky terrain; to low albedo and relatively smooth terrain. We classified and analyzed the diverse units solely based on the high-resolution image mosaic, prior to comparison to the context image, to obtain an in-depth look at possible surface evolution and underlying formational processes. We infer that some of these units represent different stages and forms of resurfacing, including cryovolcanic and tectonic resurfacing. However, significant morphological variation among units in the region indicates that there are different degrees of resurfacing at work. We have created candidate morphological sequences that provide insight into the conversion of ridged plains to chaotic terrain—generally, a process of subduing formerly sharp features through tectonic modification and/or cryovolcanism. When the map of the high-resolution area is compared to the regional context, features that appear to be one unit at regional resolution are comprised of several distinct units at high resolution, and features that appear to be smooth in the context image are found to show distinct textures. Moreover, in the context image, transitions from ridged units to disrupted units appear to be gradual; however the high-resolution image reveals them to be abrupt, suggesting tectonic control of these boundaries. These discrepancies could have important implications for a future landed exploration.

Lexical and syntactic representations in the brain: An fMRI investigation with multi-voxel pattern analyses

PubMed Central

Fedorenko, Evelina; Nieto-Castañon, Alfonso; Kanwisher, Nancy

2011-01-01

Work in theoretical linguistics and psycholinguistics suggests that human linguistic knowledge forms a continuum between individual lexical items and abstract syntactic representations, with most linguistic representations falling between the two extremes and taking the form of lexical items stored together with the syntactic/semantic contexts in which they frequently occur. Neuroimaging evidence further suggests that no brain region is selectively sensitive to only lexical information or only syntactic information. Instead, all the key brain regions that support high-level linguistic processing have been implicated in both lexical and syntactic processing, suggesting that our linguistic knowledge is plausibly represented in a distributed fashion in these brain regions. Given this distributed nature of linguistic representations, multi-voxel pattern analyses (MVPAs) can help uncover important functional properties of the language system. In the current study we use MVPAs to ask two questions: 1) Do language brain regions differ in how robustly they represent lexical vs. syntactic information?; and 2) Do any of the language bran regions distinguish between “pure” lexical information (lists of words) and “pure” abstract syntactic information (jabberwocky sentences) in the pattern of activity? We show that lexical information is represented more robustly than syntactic information across many language regions (with no language region showing the opposite pattern), as evidenced by a better discrimination between conditions that differ along the lexical dimension (sentences vs. jabberwocky, and word lists vs. nonword lists) than between conditions that differ along the syntactic dimension (sentences vs. word lists, and jabberwocky vs. nonword lists). This result suggests that lexical information may play a more critical role than syntax in the representation of linguistic meaning. We also show that several language regions reliably discriminate between “pure” lexical information and “pure” abstract syntactic information in their patterns of neural activity. PMID:21945850

Diversity of human immunodeficiency virus type 1 subtypes in Kagera and Kilimanjaro regions, Tanzania.

PubMed

Nyombi, Balthazar M; Kristiansen, Knut I; Bjune, Gunnar; Müller, Fredrik; Holm-Hansen, Carol

2008-06-01

A strategy to prevent the spread of HIV-1 worldwide is complicated by the high genetic diversity of the virus. To gain a better understanding of the HIV-1 genetic diversity in Tanzania, a molecular epidemiological investigation was conducted in Kagera and Kilimanjaro regions. While several studies have addressed HIV-1 subtypes in Tanzania, this is the first study to describe the virus subtypes circulating in Kagera. The Kagera region is the epicenter of the HIV-1 epidemic in Africa, and it was therefore of interest to compare the prevalence of HIV subtypes in this region and Kilimanjaro. Blood samples were obtained from 246 HIV-1-infected pregnant women attending antenatal clinics. Plasma HIV-1 RNA was extracted, amplified, and sequenced in the env C2V3 and/or pol regions from 209 samples. Based on the analysis of env C2V3 and pol sequences, 47.4% had concordant subtypes, 19.1% were discordant indicating recombination, and for 33.5% sequences were obtained for only one region. The distribution HIV-1 subtypes based on the phylogenetic analysis of paired env C2V3/ pol sequences in Kagera region was A/A (27.8%), C/C (29.6%), D/D (16.7%), and unique recombinant forms (25.9%), and in Kilimanjaro region was A/A (32.9%), C/C (25.9%), D/D (10.6%), CRF10_CD (1.2%), and unique recombinant forms (29.4%). The env C2V3 subsubtype A2 and env C2V3/pol CRF10_CD were also observed indicating that these recombinants are circulating in Tanzania. The high diversity of HIV-1 subtypes and the high prevalence of recombinants demonstrated in this study necessitate expanded and continuous monitoring of the epidemic in Tanzania. The trend may have implications for current national control strategies against the HIV-1 epidemic.

Lexical and syntactic representations in the brain: an fMRI investigation with multi-voxel pattern analyses.

PubMed

Fedorenko, Evelina; Nieto-Castañon, Alfonso; Kanwisher, Nancy

2012-03-01

Work in theoretical linguistics and psycholinguistics suggests that human linguistic knowledge forms a continuum between individual lexical items and abstract syntactic representations, with most linguistic representations falling between the two extremes and taking the form of lexical items stored together with the syntactic/semantic contexts in which they frequently occur. Neuroimaging evidence further suggests that no brain region is selectively sensitive to only lexical information or only syntactic information. Instead, all the key brain regions that support high-level linguistic processing have been implicated in both lexical and syntactic processing, suggesting that our linguistic knowledge is plausibly represented in a distributed fashion in these brain regions. Given this distributed nature of linguistic representations, multi-voxel pattern analyses (MVPAs) can help uncover important functional properties of the language system. In the current study we use MVPAs to ask two questions: (1) Do language brain regions differ in how robustly they represent lexical vs. syntactic information? and (2) Do any of the language bran regions distinguish between "pure" lexical information (lists of words) and "pure" abstract syntactic information (jabberwocky sentences) in the pattern of activity? We show that lexical information is represented more robustly than syntactic information across many language regions (with no language region showing the opposite pattern), as evidenced by a better discrimination between conditions that differ along the lexical dimension (sentences vs. jabberwocky, and word lists vs. nonword lists) than between conditions that differ along the syntactic dimension (sentences vs. word lists, and jabberwocky vs. nonword lists). This result suggests that lexical information may play a more critical role than syntax in the representation of linguistic meaning. We also show that several language regions reliably discriminate between "pure" lexical information and "pure" abstract syntactic information in their patterns of neural activity. Copyright © 2011 Elsevier Ltd. All rights reserved.

Crystalline Silicates in Comets: Modeling Irregularly-Shaped Forsterite Crystals and Its Implications on Condensation Conditions

NASA Technical Reports Server (NTRS)

Wooden, Diane H.; Lindsay, Sean S.

2011-01-01

Crystalline silicates in comets are a product of the condensation in the hot inner regions (T > or approx. equals 1400 K [1]) of our proto-planetary disk or annealing at somewhat lower temperatures (T > or approx. equals 1000-1200 K) [2, 3, 4] in shocks coupled with disk evolutionary processes that include radial transport of crystals from their formation locations out to the cold outer regions where comet nuclei formed. The grain shape of forsterite (crystals) could be indicative of their formation pathways at high temperatures through vapor-solid condensation or at lower temperatures through vapor-liquid-solid formation and growth [5, 6, 7]. Experiments demonstrate that crystals that formed from a rapidly cooled highly supersaturated silicate vapor are characterized by bulky, platy, columnar/needle and droplet shapes for values of temperature and supersaturation, T and sigma, of 1000-1450 C and < 97, 700-1000 C and 97-161, 580-820 C and 131-230, and <500 C and > 230, respectively [7]. The experimental columnar/needle shapes, which form by vapor-liquid-solid at lower temperatures (<820 C), are extended stacks of plates, where the extension is not correlated with an axial direction: columnar/needles may be extended in the c-axis or a-axis direction, can change directions, and/or are off-kilter or a bit askew extending in a combination of the a- and c-axis direction.

Molecular architecture of human prion protein amyloid: a parallel, in-register beta-structure.

PubMed

Cobb, Nathan J; Sönnichsen, Frank D; McHaourab, Hassane; Surewicz, Witold K

2007-11-27

Transmissible spongiform encephalopathies (TSEs) represent a group of fatal neurodegenerative diseases that are associated with conformational conversion of the normally monomeric and alpha-helical prion protein, PrP(C), to the beta-sheet-rich PrP(Sc). This latter conformer is believed to constitute the main component of the infectious TSE agent. In contrast to high-resolution data for the PrP(C) monomer, structures of the pathogenic PrP(Sc) or synthetic PrP(Sc)-like aggregates remain elusive. Here we have used site-directed spin labeling and EPR spectroscopy to probe the molecular architecture of the recombinant PrP amyloid, a misfolded form recently reported to induce transmissible disease in mice overexpressing an N-terminally truncated form of PrP(C). Our data show that, in contrast to earlier, largely theoretical models, the con formational conversion of PrP(C) involves major refolding of the C-terminal alpha-helical region. The core of the amyloid maps to C-terminal residues from approximately 160-220, and these residues form single-molecule layers that stack on top of one another with parallel, in-register alignment of beta-strands. This structural insight has important implications for understanding the molecular basis of prion propagation, as well as hereditary prion diseases, most of which are associated with point mutations in the region found to undergo a refolding to beta-structure.

Identifying a Network of Brain Regions Involved in Aversion-Related Processing: A Cross-Species Translational Investigation

PubMed Central

Hayes, Dave J.; Northoff, Georg

2011-01-01

The ability to detect and respond appropriately to aversive stimuli is essential for all organisms, from fruit flies to humans. This suggests the existence of a core neural network which mediates aversion-related processing. Human imaging studies on aversion have highlighted the involvement of various cortical regions, such as the prefrontal cortex, while animal studies have focused largely on subcortical regions like the periaqueductal gray and hypothalamus. However, whether and how these regions form a core neural network of aversion remains unclear. To help determine this, a translational cross-species investigation in humans (i.e., meta-analysis) and other animals (i.e., systematic review of functional neuroanatomy) was performed. Our results highlighted the recruitment of the anterior cingulate cortex, the anterior insula, and the amygdala as well as other subcortical (e.g., thalamus, midbrain) and cortical (e.g., orbitofrontal) regions in both animals and humans. Importantly, involvement of these regions remained independent of sensory modality. This study provides evidence for a core neural network mediating aversion in both animals and humans. This not only contributes to our understanding of the trans-species neural correlates of aversion but may also carry important implications for psychiatric disorders where abnormal aversive behavior can often be observed. PMID:22102836

An exhumed Late Paleozoic canyon in the rocky mountains

USGS Publications Warehouse

Soreghan, G.S.; Sweet, D.E.; Marra, K.R.; Eble, C.F.; Soreghan, M.J.; Elmore, R.D.; Kaplan, S.A.; Blum, M.D.

2007-01-01

Landscapes are thought to be youthful, particularly those of active orogenic belts. Unaweep Canyon in the Colorado Rocky Mountains, a large gorge drained by two opposite-flowing creeks, is an exception. Its origin has long been enigmatic, but new data indicate that it is an exhumed late Paleozoic landform. Its survival within a region of profound late Paleozoic orogenesis demands a reassessment of tectonic models for the Ancestral Rocky Mountains, and its form and genesis have significant implications for understanding late Paleozoic equatorial climate. This discovery highlights the utility of paleogeomorphology as a tectonic and climatic indicator. ?? 2007 by The University of Chicago. All rights reserved.

Do some of the sub-micrometer cosmic dust particles come from the sun.

NASA Technical Reports Server (NTRS)

Hemenway, C. L.; Erkes, J. W.; Greenberg, J. M.; Hallgren, D. S.; Schmalberger, D. C.

1973-01-01

Studies of cosmic dust particles collected at altitudes of 80 to 120 km over White Sands, New Mexico, and at times of noctilucent clouds over Kiruna, Sweden, indicate that an anomalously high atomic weight contribution is present within those particles collected at Kiruna. The elements observed are inconsistent with an origin due to atomic bomb fallout, meteoroidal crumbling, lunar ejecta, or comets. Many of these heavy elements may be stable in particulate form at the relatively high temperatures found in the coolest regions of the solar atmosphere. Some implications of the sun as the source of a significant component of cosmic dust are discussed.

Variation in handshape and orientation in British Sign Language: The case of the ‘1’ hand configuration

PubMed Central

Fenlon, Jordan; Schembri, Adam; Rentelis, Ramas; Cormier, Kearsy

2013-01-01

This paper investigates phonological variation in British Sign Language (BSL) signs produced with a ‘1’ hand configuration in citation form. Multivariate analyses of 2084 tokens reveals that handshape variation in these signs is constrained by linguistic factors (e.g., the preceding and following phonological environment, grammatical category, indexicality, lexical frequency). The only significant social factor was region. For the subset of signs where orientation was also investigated, only grammatical function was important (the surrounding phonological environment and social factors were not significant). The implications for an understanding of pointing signs in signed languages are discussed. PMID:23805018

Progression of cutaneous melanoma: implications for treatment

PubMed Central

Leong, Stanley P. L.; Mihm, Martin C.; Murphy, George F.; Hoon, Dave S. B.; Kashani-Sabet, Mohammed; Agarwala, Sanjiv S.; Zager, Jonathan S.; Hauschild, Axel; Sondak, Vernon K.; Guild, Valerie; Kirkwood, John M.

2015-01-01

The survival rates of melanoma, like any type of cancer, become worse with advancing stage. Spectrum theory is most consistent with the progression of melanoma from the primary site to the in-transit locations, regional or sentinel lymph nodes and beyond to the distant sites. Therefore, early diagnosis and surgical treatment before its spread is the most effective treatment. Recently, new approaches have revolutionized the diagnosis and treatment of melanoma. Genomic profiling and sequencing will form the basis for molecular taxonomy for more accurate subgrouping of melanoma patients in the future. New insights of molecular mechanisms of metastasis are summarized in this review article. Sentinel lymph node biopsy has become a standard of care for staging primary melanoma without the need for a more morbid complete regional lymph node dissection. With recent developments in molecular biology and genomics, novel molecular targeted therapy is being developed through clinical trials. PMID:22892755

Microstructure characterization of hypereutectoid aluminium bronze composite coating

NASA Astrophysics Data System (ADS)

Kucita, P.; Wang, S. C.; Li, W. S.; Cook, R. B.; Starink, M. J.

2015-10-01

Hypereutectoid aluminium bronze coating was deposited onto an E.N. 10503 steel substrate using plasma transferred arc welding (PTA). Microstructure characterisation of the coating and a section near the steel substrate joint was carried out using SEM, EBSD, EDS in conjunction with XRD and depth-sensing nano-indentation. The constituent phases in the coating were identified as: martensitic Cu3Al β1' phase, solid solution of Al in Cu α phase and the intermetallic Fe3Al κ1 phase. The region near the steel substrate was characterised by high hardness, large grains and presence of Cu precipitates. No cracks were observed in this region. The coating has high hardness of 4.9GPa and Young's modulus of 121.7GPa. This is attributed to homogeneous distribution of sub microns size Fe3Al intermetallic phase. The implications of the coating to the engineering application of sheet metal forming are discussed.

Radio supernovae and super star clusters in the circumnuclear region of NGC 1365

NASA Astrophysics Data System (ADS)

Lindblad, P. O.; Kristen, H.

Groundbased optical and VLA observations have shown that the nucleus of the barred Seyfert 1 galaxy NGC 1365 is surrounded by a number of star forming regions, or "hot spots", as well as a number of resolved and unresolved continuum radio sources. HST/FOC observations reveal that the nucleus is surrounded by a ring of very compact unresolved sources of the kind that have been discovered in a number of other galaxies, and that have been assumed to be very compact young globular star clusters. The hot spots are resolved into groups of such compact sources. VLA observations at lambda = 2 cm, where the resolution approaches that of HST, reveals that the brightest unresolved radio source at 2 cm, which has been assumed to be a radio supernova, coincides with one of the compact HST sources. The implications of this will be discussed.

Social context of human immunodeficiency virus transmission in Africa: historical and cultural bases of east and central African sexual relations.

PubMed

Larson, A

1989-01-01

The literature relating to the social context of sexual relations in East and Central Africa has several implications for the heterosexual transmission of human immunodeficiency virus (HIV). Colonially created cities in the region still discriminate economically and socially against women. Rapid urbanization is occurring, but migrants maintain strong ties with rural areas. Traditional attitudes towards marriage and sexuality affect urban behavior in the extent of marital stability, the frequency of polygyny, and the emotional bond between spouses. Ethnic groups in Kampala and Nairobi exemplify the cultural foundations of two forms of sexual relations found in the region, one characterized by prostitution and the other by small circles of interchanging lovers. The first results in a more rapid spread of HIV through the urban population and outwards into rural areas. Each pattern exerts unique constraints on behavioral change and requires different prevention campaigns.

ALMA Detection of Interstellar Methoxymethanol (CH3OCH2OH)

NASA Astrophysics Data System (ADS)

McGuire, Brett A.; Shingledecker, Christopher N.; Willis, Eric R.; Burkhardt, Andrew M.; El-Abd, Samer; Motiyenko, Roman A.; Brogan, Crystal L.; Hunter, Todd R.; Margulès, Laurent; Guillemin, Jean-Claude; Garrod, Robin T.; Herbst, Eric; Remijan, Anthony J.

2017-12-01

We report the detection of interstellar methoxymethanol (CH3OCH2OH) in Atacama Large Millimeter/submillimeter Array (ALMA) Bands 6 and 7 toward the MM1 core in the high-mass star-forming region NGC 6334I at ∼0.″1–1″ spatial resolution. A column density of 4(2) × 1018 cm‑2 at T ex = 200 K is derived toward MM1, ∼34 times less abundant than methanol (CH3OH), and significantly higher than predicted by astrochemical models. Probable formation and destruction pathways are discussed, primarily through the reaction of the CH3OH photodissociation products, the methoxy (CH3O) and hydroxymethyl (CH2OH) radicals. Finally, we comment on the implications of these mechanisms on gas-phase versus grain-surface routes operative in the region, and the possibility of electron-induced dissociation of CH3OH rather than photodissociation.

On the formation of runaway stars BN and x in the Orion Nebula Cluster

NASA Astrophysics Data System (ADS)

Farias, J. P.; Tan, J. C.

2018-05-01

We explore scenarios for the dynamical ejection of stars BN and x from source I in the Kleinmann-Low nebula of the Orion Nebula Cluster (ONC), which is important because it is the closest region of massive star formation. This ejection would cause source I to become a close binary or a merger product of two stars. We thus consider binary-binary encounters as the mechanism to produce this event. By running a large suite of N-body simulations, we find that it is nearly impossible to match the observations when using the commonly adopted masses for the participants, especially a source I mass of 7 M⊙. The only way to recreate the event is if source I is more massive, that is, 20 M⊙. However, even in this case, the likelihood of reproducing the observed system is low. We discuss the implications of these results for understanding this important star-forming region.

Elucidating secondary organic aerosol from diesel and gasoline vehicles through detailed characterization of organic carbon emissions.

PubMed

Gentner, Drew R; Isaacman, Gabriel; Worton, David R; Chan, Arthur W H; Dallmann, Timothy R; Davis, Laura; Liu, Shang; Day, Douglas A; Russell, Lynn M; Wilson, Kevin R; Weber, Robin; Guha, Abhinav; Harley, Robert A; Goldstein, Allen H

2012-11-06

Emissions from gasoline and diesel vehicles are predominant anthropogenic sources of reactive gas-phase organic carbon and key precursors to secondary organic aerosol (SOA) in urban areas. Their relative importance for aerosol formation is a controversial issue with implications for air quality control policy and public health. We characterize the chemical composition, mass distribution, and organic aerosol formation potential of emissions from gasoline and diesel vehicles, and find diesel exhaust is seven times more efficient at forming aerosol than gasoline exhaust. However, both sources are important for air quality; depending on a region's fuel use, diesel is responsible for 65% to 90% of vehicular-derived SOA, with substantial contributions from aromatic and aliphatic hydrocarbons. Including these insights on source characterization and SOA formation will improve regional pollution control policies, fuel regulations, and methodologies for future measurement, laboratory, and modeling studies.

Structure of a Bacterial Dynamin-like Protein Lipid Tube Provides a Mechanism For Assembly and Membrane Curving

PubMed Central

Low, Harry H.; Sachse, Carsten; Amos, Linda A.; Löwe, Jan

2009-01-01

Summary Proteins of the dynamin superfamily mediate membrane fission, fusion, and restructuring events by polymerizing upon lipid bilayers and forcing regions of high curvature. In this work, we show the electron cryomicroscopy reconstruction of a bacterial dynamin-like protein (BDLP) helical filament decorating a lipid tube at ∼11 Å resolution. We fitted the BDLP crystal structure and produced a molecular model for the entire filament. The BDLP GTPase domain dimerizes and forms the tube surface, the GTPase effector domain (GED) mediates self-assembly, and the paddle region contacts the lipids and promotes curvature. Association of BDLP with GMPPNP and lipid induces radical, large-scale conformational changes affecting polymerization. Nucleotide hydrolysis seems therefore to be coupled to polymer disassembly and dissociation from lipid, rather than membrane restructuring. Observed structural similarities with rat dynamin 1 suggest that our results have broad implication for other dynamin family members. PMID:20064379

Oligomerization of coronin: Implication on actin filament length in Leishmania.

PubMed

Srivastava, Rashmi; Prasadareddy Kajuluri, Lova; Pathak, Neelam; Gupta, Chhitar M; Sahasrabuddhe, Amogh A

2015-12-01

Coronin proteins bind with actin filaments and participate in regulation of actin-dependent processes. These proteins contain a coiled-coil domain at their C-terminus, which is responsible for their dimeric or trimeric forms. However, the functional significance of these oligomeric configurations in organizing the actin cytoskeleton is obscure. Here, we report that the Leishmania coronin exists in a higher oligomeric form through its coiled-coil domain, the truncation of which ablates the ability of Leishmania coronin to assist actin-filament formation. F-actin co-sedimentation assay using purified proteins shows that the coiled-coil domain does not interact with actin-filaments and its absence does not abrogate actin-coronin interaction. Furthermore, it was shown that unlike other coronins, Leishmania coronin interacts with actin-filaments through its unique region. These results provided important insights into the role of coronin oligomerization in modulating actin-network. © 2015 Wiley Periodicals, Inc.

Zircon-quartz-calcite segregations in carbonate-alkaline metasomatic rocks of the western Baikal region and their petrogenetic implications

NASA Astrophysics Data System (ADS)

Savelyeva, V. B.; Bazarova, E. P.; Sharygin, V. V.; Karmanov, N. S.

2015-12-01

Fine-grained segregations up to 5 mm in size composed of graphic intergrowths of zircon, quartz, calcite and containing up to 0.8 wt % SrO have been found in albite-riebeckite and dolomite-biotite metasomatic rocks formed after alaskite granite. They contain magnetite, titanomagnetite (25.4 wt % TiO2), cerite-(Ce,Nd), rutile (up to 1.2 wt % Nb2O5), as well as rare micrograins of monazite-(Ce), bastnaesite-(Ce), and barite (up to 5.7 wt % SrO). The fine-grained structure of mineral aggregates suggests a metacolloidal nature. It is assumed that the zircon-quartz-calcite assemblage was formed due to exchange decomposition reaction between the salt phase of hydrothermal solution with predominant Na2CO3, elevated Zr and, to a lesser extent, Fe, Ti, LREE, Nb contents and dissolved calcium and silica compounds of a Na2SiO3 type.

A 2D Microphysical Analysis of Aerosol Nucleation in the Polar Winter Stratosphere: Implications for H2SO4 Photolysis and Nucleation Mechanisms

NASA Technical Reports Server (NTRS)

Mills, Michael J.; Toon, Owen B.; Mills, Michael J.; Solomon, Susan

1997-01-01

Each spring a layer of small particles forms between 20 and 30 km in the polar regions. Results are presented from a 2D microphysical model of sulfate aerosol, which provide the first self-consistent explanation of the observed "CN layer." Photochemical conversion of sulfuric acid to SO2 in the upper stratosphere and mesosphere is necessary for this layer to form. Recent laboratory measurements of H2SO4 and SO3 photolysis rates are consistent with such conversion, though an additional source of SO2 may be required. Nucleation throughout the polar winter extends the top of the aerosol layer to higher altitudes, despite strong downward transport of ambient air. This finding may be important to heterogeneous chemistry at the top of the aerosol layer in polar winter and spring.

Barium bioaccumulation by bacterial biofilms and implications for Ba cycling and use of Ba proxies.

PubMed

Martinez-Ruiz, Francisca; Jroundi, Fadwa; Paytan, Adina; Guerra-Tschuschke, Isabel; Abad, María Del Mar; González-Muñoz, María Teresa

2018-04-24

Ba proxies have been broadly used to reconstruct past oceanic export production. However, the precise mechanisms underlying barite precipitation in undersaturated seawater are not known. The link between bacterial production and particulate Ba in the ocean suggests that bacteria may play a role. Here we show that under experimental conditions marine bacterial biofilms, particularly extracellular polymeric substances (EPS), are capable of bioaccumulating Ba, providing adequate conditions for barite precipitation. An amorphous P-rich phase is formed at the initial stages of Ba bioaccumulation, which evolves into barite crystals. This supports that in high productivity regions where large amounts of organic matter are subjected to bacterial degradation, the abundant EPS would serve to bind the necessary Ba and form nucleation sites leading to barite precipitation. This also provides new insights into barite precipitation and opens an exciting field to explore the role of EPS in mineral precipitation in the ocean.

Methodological issues in medical workforce analysis: implications for regional Australia.

PubMed

Hays, R B; Veitch, P C; Franklin, L; Crossland, L

1998-02-01

Medical workforce data have a profound impact on health policy formulation, but derived doctor population ratios (DPR) are often more relevant to plotting national trends than providing a detailed regional or local workforce perspective. Regional workforce data may be more useful if national approaches are augmented by local information. In developing a detailed workforce analysis for one region of Australia, the authors encountered several challenging methodological issues, including the accuracy of medical workforce databases, clarity of definition of community boundaries, interpretation of workforce definitions and the difficulty accounting for local community needs. This paper discusses the implications for regional workforce research.

Integrative genomic analysis implicates limited peripheral adipose storage capacity in the pathogenesis of human insulin resistance.

PubMed

Lotta, Luca A; Gulati, Pawan; Day, Felix R; Payne, Felicity; Ongen, Halit; van de Bunt, Martijn; Gaulton, Kyle J; Eicher, John D; Sharp, Stephen J; Luan, Jian'an; De Lucia Rolfe, Emanuella; Stewart, Isobel D; Wheeler, Eleanor; Willems, Sara M; Adams, Claire; Yaghootkar, Hanieh; Forouhi, Nita G; Khaw, Kay-Tee; Johnson, Andrew D; Semple, Robert K; Frayling, Timothy; Perry, John R B; Dermitzakis, Emmanouil; McCarthy, Mark I; Barroso, Inês; Wareham, Nicholas J; Savage, David B; Langenberg, Claudia; O'Rahilly, Stephen; Scott, Robert A

2017-01-01

Insulin resistance is a key mediator of obesity-related cardiometabolic disease, yet the mechanisms underlying this link remain obscure. Using an integrative genomic approach, we identify 53 genomic regions associated with insulin resistance phenotypes (higher fasting insulin levels adjusted for BMI, lower HDL cholesterol levels and higher triglyceride levels) and provide evidence that their link with higher cardiometabolic risk is underpinned by an association with lower adipose mass in peripheral compartments. Using these 53 loci, we show a polygenic contribution to familial partial lipodystrophy type 1, a severe form of insulin resistance, and highlight shared molecular mechanisms in common/mild and rare/severe insulin resistance. Population-level genetic analyses combined with experiments in cellular models implicate CCDC92, DNAH10 and L3MBTL3 as previously unrecognized molecules influencing adipocyte differentiation. Our findings support the notion that limited storage capacity of peripheral adipose tissue is an important etiological component in insulin-resistant cardiometabolic disease and highlight genes and mechanisms underpinning this link.

Dissecting the telomere–inner nuclear membrane interface formed in meiosis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pendlebury, Devon F.; Fujiwara, Yasuhiro; Tesmer, Valerie M.

Tethering telomeres to the inner nuclear membrane (INM) allows homologous chromosome pairing during meiosis. The meiosis-specific protein TERB1 binds the telomeric protein TRF1 to establish telomere–INM connectivity and is essential for mouse fertility. Here we solve the structure of the human TRF1–TERB1 interface to reveal the structural basis for telomere–INM linkage. Disruption of this interface abrogates binding and compromises telomere–INM attachment in mice. An embedded CDK-phosphorylation site within the TRF1-binding region of TERB1 provides a mechanism for cap exchange, a late-pachytene phenomenon involving the dissociation of the TRF1–TERB1 complex. Indeed, further strengthening this interaction interferes with cap exchange. Finally, ourmore » biochemical analysis implicates distinct complexes for telomere–INM tethering and chromosome-end protection during meiosis. Our studies unravel the structure, stoichiometry, and physiological implications underlying telomere–INM tethering, thereby providing unprecedented insights into the unique function of telomeres in meiosis.« less

Local growth of dust- and ice-mixed aggregates as cometary building blocks in the solar nebula

NASA Astrophysics Data System (ADS)

Lorek, S.; Lacerda, P.; Blum, J.

2018-03-01

Context. Comet formation by gravitational instability requires aggregates that trigger the streaming instability and cluster in pebble-clouds. These aggregates form as mixtures of dust and ice from (sub-)micrometre-sized dust and ice grains via coagulation in the solar nebula. Aim. We investigate the growth of aggregates from (sub-)micrometre-sized dust and ice monomer grains. We are interested in the properties of these aggregates: whether they might trigger the streaming instability, how they compare to pebbles found on comets, and what the implications are for comet formation in collapsing pebble-clouds. Methods: We used Monte Carlo simulations to study the growth of aggregates through coagulation locally in the comet-forming region at 30 au. We used a collision model that can accommodate sticking, bouncing, fragmentation, and porosity of dust- and ice-mixed aggregates. We compared our results to measurements of pebbles on comet 67P/Churyumov-Gerasimenko. Results: We find that aggregate growth becomes limited by radial drift towards the Sun for 1 μm sized monomers and by bouncing collisions for 0.1 μm sized monomers before the aggregates reach a Stokes number that would trigger the streaming instability (Stmin). We argue that in a bouncing-dominated system, aggregates can reach Stmin through compression in bouncing collisions if compression is faster than radial drift. In the comet-forming region ( 30 au), aggregates with Stmin have volume-filling factors of 10-2 and radii of a few millimetres. These sizes are comparable to the sizes of pebbles found on comet 67P/Churyumov-Gerasimenko. The porosity of the aggregates formed in the solar nebula would imply that comets formed in pebble-clouds with masses equivalent to planetesimals of the order of 100 km in diameter.

Perturbative corrections to B → D form factors in QCD

NASA Astrophysics Data System (ADS)

Wang, Yu-Ming; Wei, Yan-Bing; Shen, Yue-Long; Lü, Cai-Dian

2017-06-01

We compute perturbative QCD corrections to B → D form factors at leading power in Λ/ m b , at large hadronic recoil, from the light-cone sum rules (LCSR) with B-meson distribution amplitudes in HQET. QCD factorization for the vacuum-to- B-meson correlation function with an interpolating current for the D-meson is demonstrated explicitly at one loop with the power counting scheme {m}_c˜ O(√{Λ {m}_b}) . The jet functions encoding information of the hard-collinear dynamics in the above-mentioned correlation function are complicated by the appearance of an additional hard-collinear scale m c , compared to the counterparts entering the factorization formula of the vacuum-to- B-meson correction function for the construction of B → π from factors. Inspecting the next-to-leading-logarithmic sum rules for the form factors of B → Dℓν indicates that perturbative corrections to the hard-collinear functions are more profound than that for the hard functions, with the default theory inputs, in the physical kinematic region. We further compute the subleading power correction induced by the three-particle quark-gluon distribution amplitudes of the B-meson at tree level employing the background gluon field approach. The LCSR predictions for the semileptonic B → Dℓν form factors are then extrapolated to the entire kinematic region with the z-series parametrization. Phenomenological implications of our determinations for the form factors f BD +,0 ( q 2) are explored by investigating the (differential) branching fractions and the R( D) ratio of B → Dℓν and by determining the CKM matrix element |V cb | from the total decay rate of B → Dμν μ .

Implications of land disturbance on drinking water treatability in a changing climate: demonstrating the need for "source water supply and protection" strategies.

PubMed

Emelko, Monica B; Silins, Uldis; Bladon, Kevin D; Stone, Micheal

2011-01-01

Forests form the critical source water areas for downstream drinking water supplies in many parts of the world, including the Rocky Mountain regions of North America. Large scale natural disturbances from wildfire and severe insect infestation are more likely because of warming climate and can significantly impact water quality downstream of forested headwaters regions. To investigate potential implications of changing climate and wildfire on drinking water treatment, the 2003 Lost Creek Wildfire in Alberta, Canada was studied. Four years of comprehensive hydrology and water quality data from seven watersheds were evaluated and synthesized to assess the implications of wildfire and post-fire intervention (salvage-logging) on downstream drinking water treatment. The 95th percentile turbidity and DOC remained low in streams draining unburned watersheds (5.1 NTU, 3.8 mg/L), even during periods of potential treatment challenge (e.g., stormflows, spring freshet); in contrast, they were elevated in streams draining burned (15.3 NTU, 4.6 mg/L) and salvage-logged (18.8 NTU, 9.9 mg/L) watersheds. Persistent increases in these parameters and observed increases in other contaminants such as nutrients, heavy metals, and chlorophyll-a in discharge from burned and salvage-logged watersheds present important economic and operational challenges for water treatment; most notably, a potential increased dependence on solids and DOC removal processes. Many traditional source water protection strategies would fail to adequately identify and evaluate many of the significant wildfire- and post-fire management-associated implications to drinking water "treatability"; accordingly, it is proposed that "source water supply and protection strategies" should be developed to consider a suppliers' ability to provide adequate quantities of potable water to meet demand by addressing all aspects of drinking water "supply" (i.e., quantity, timing of availability, and quality) and their relationship to "treatability" in response to land disturbance. Copyright © 2010 Elsevier Ltd. All rights reserved.

Historical Agricultural Nitrogen Fertilizer Management in the Contiguous United States during 1850-2015.

NASA Astrophysics Data System (ADS)

Lu, C.; Cao, P.; Yu, Z.

2017-12-01

The United States has a century-long history of managing anthropogenic nitrogen (N) fertilizer to booster the crop production. Accurate characterization of N fertilizer use history could provide essential implications for N use efficiency (NUE) enhancement and N loss reduction. However, a spatially explicit time-series data remains lacking to describe how N fertilizer use varied among crop types, regions, and time periods. In this study, we therefore developed long-term gridded N management maps depicting N fertilizer application rate, timing, and ratio of fertilizer forms in nine major crops (i.e. corn, soybean, winter wheat, spring wheat, cotton, sorghum, rice, barley, and durum wheat) in the contiguous U.S. at a resolution of 1 km × 1 km during 1850-2015. We found that N application rates of the U.S. increased by approximately 34 times since 1940. Nonetheless, spatial analysis revealed that N-use hotspots have shifted from the West and Southeast to the Midwest and the Great Plains since 1900. Specifically, corn of the Corn Belt region received the most intensive N input in spring, followed by large N application amount in fall, implying a high N loss risk in this region. Moreover, spatiotemporal patterns of NH4+/NO3- ratio varied largely among regions. Generally, farmers have increasingly favored NH4+-form fertilizers over NO3- fertilizers since the 1940s. The N fertilizer use data developed in this study could serve as an essential input for modeling communities to fully assess the N addition impacts, and improve N management to alleviate environmental problems.

Structural characterization of CYP144A1 - a cytochrome P450 enzyme expressed from alternative transcripts in Mycobacterium tuberculosis

NASA Astrophysics Data System (ADS)

Chenge, Jude; Kavanagh, Madeline E.; Driscoll, Max D.; McLean, Kirsty J.; Young, Douglas B.; Cortes, Teresa; Matak-Vinkovic, Dijana; Levy, Colin W.; Rigby, Stephen E. J.; Leys, David; Abell, Chris; Munro, Andrew W.

2016-05-01

Mycobacterium tuberculosis (Mtb) causes the disease tuberculosis (TB). The virulent Mtb H37Rv strain encodes 20 cytochrome P450 (CYP) enzymes, many of which are implicated in Mtb survival and pathogenicity in the human host. Bioinformatics analysis revealed that CYP144A1 is retained exclusively within the Mycobacterium genus, particularly in species causing human and animal disease. Transcriptomic annotation revealed two possible CYP144A1 start codons, leading to expression of (i) a “full-length” 434 amino acid version (CYP144A1-FLV) and (ii) a “truncated” 404 amino acid version (CYP144A1-TRV). Computational analysis predicted that the extended N-terminal region of CYP144A1-FLV is largely unstructured. CYP144A1 FLV and TRV forms were purified in heme-bound states. Mass spectrometry confirmed production of intact, His6-tagged forms of CYP144A1-FLV and -TRV, with EPR demonstrating cysteine thiolate coordination of heme iron in both cases. Hydrodynamic analysis indicated that both CYP144A1 forms are monomeric. CYP144A1-TRV was crystallized and the first structure of a CYP144 family P450 protein determined. CYP144A1-TRV has an open structure primed for substrate binding, with a large active site cavity. Our data provide the first evidence that Mtb produces two different forms of CYP144A1 from alternative transcripts, with CYP144A1-TRV generated from a leaderless transcript lacking a 5‧-untranslated region and Shine-Dalgarno ribosome binding site.

Structural evolution of the Chugach-Prince William terrane at the hinge of the orocline in Prince William Sound, and implications for ore deposits: A section in Geologic studies in Alaska by the U.S. Geological Survey, 1992

USGS Publications Warehouse

Haeussler, Peter J.; Nelson, Steven W.

1993-01-01

The Chugach-Prince William terrane is a Mesozoic through Tertiary accretionary complex that lies along coastal southern and southeastern Alaska. In Prince William Sound, the regional structural fabric bends about 90°, forming an orocline. Rocks at the hinge of the orocline consist of turbidites, conglomerate, and minor volcanic rocks and limestone. The structural geology in the hinge region defines a number of domains (each >15 km2) consisting of kilometer-scale tight folds. Adjacent domains may have up to a 90° difference in the strike of bedding and trend of fold axes. Four granite to tonalitic or gabbro plutons are dated or inferred to be about 35 Main age, and all were emplaced after regional folding. Base-metal sulfide mineral occurrences, barren quartz veins, and strikeslip late faults locally cut the plutons and generally strike north-south. The mineral occurrences often have a dendritic network of quartz veinlets adjacent to the mineralized zone and brecciated wall rock within the zone. Oroclinal bending, in the style of bending a bar, is consistent with the origin of the complicated domainal geometry of the structures. The Contact fault, thought by some workers to juxtapose two parts of the accretionary prism, truncates one of these 35-Ma plutons with strike-slip offset, but previous reverse motion cannot be ruled out. A magmatic source for the ore-forming fluids is consistent with the structural and mineralogical data. The north-south orientation of mineralized zones suggests that east-west extension occurred possibly during release of fluids from the plutons, which locally hydrofractured the wall rocks and allowed migration of ore-forming fluids along preexisting fractures.

Elucidation of amyloid beta-protein oligomerization mechanisms: discrete molecular dynamics study.

PubMed

Urbanc, B; Betnel, M; Cruz, L; Bitan, G; Teplow, D B

2010-03-31

Oligomers of amyloid beta-protein (Abeta) play a central role in the pathology of Alzheimer's disease. Of the two predominant Abeta alloforms, Abeta(1-40) and Abeta(1-42), Abeta(1-42) is more strongly implicated in the disease. We elucidated the structural characteristics of oligomers of Abeta(1-40) and Abeta(1-42) and their Arctic mutants, [E22G]Abeta(1-40) and [E22G]Abeta(1-42). We simulated oligomer formation using discrete molecular dynamics (DMD) with a four-bead protein model, backbone hydrogen bonding, and residue-specific interactions due to effective hydropathy and charge. For all four peptides under study, we derived the characteristic oligomer size distributions that were in agreement with prior experimental findings. Unlike Abeta(1-40), Abeta(1-42) had a high propensity to form paranuclei (pentameric or hexameric) structures that could self-associate into higher-order oligomers. Neither of the Arctic mutants formed higher-order oligomers, but [E22G]Abeta(1-40) formed paranuclei with a similar propensity to that of Abeta(1-42). Whereas the best agreement with the experimental data was obtained when the charged residues were modeled as solely hydrophilic, further assembly from spherical oligomers into elongated protofibrils was induced by nonzero electrostatic interactions among the charged residues. Structural analysis revealed that the C-terminal region played a dominant role in Abeta(1-42) oligomer formation whereas Abeta(1-40) oligomerization was primarily driven by intermolecular interactions among the central hydrophobic regions. The N-terminal region A2-F4 played a prominent role in Abeta(1-40) oligomerization but did not contribute to the oligomerization of Abeta(1-42) or the Arctic mutants. The oligomer structure of both Arctic peptides resembled Abeta(1-42) more than Abeta(1-40), consistent with their potentially more toxic nature.

Formation of the UV Spectrum of Molecular Hydrogen in the Sun

NASA Astrophysics Data System (ADS)

Jaeggli, S. A.; Judge, P. G.; Daw, A. N.

2018-03-01

Ultraviolet (UV) lines of molecular hydrogen have been observed in solar spectra for almost four decades, but the behavior of the molecular spectrum and its implications for solar atmospheric structure are not fully understood. Data from the High-Resolution Telescope Spectrometer (HRTS) instrument revealed that H2 emission forms in particular regions, selectively excited by a bright UV transition region and chromospheric lines. We test the conditions under which H2 emission can originate by studying non-LTE models, sampling a broad range of temperature stratifications and radiation conditions. Stratification plays the dominant role in determining the population densities of H2, which forms in greatest abundance near the continuum photosphere. However, opacity due to the photoionization of Si and other neutrals determines the depth to which UV radiation can penetrate to excite the H2. Thus the majority of H2 emission forms in a narrow region, at about 650 km in standard one-dimensional (1D) models of the quiet Sun, near the τ = 1 opacity surface for the exciting UV radiation, generally coming from above. When irradiated from above using observed intensities of bright UV emission lines, detailed non-LTE calculations show that the spectrum of H2 seen in the quiet-Sun Solar Ultraviolet Measurement of Emitted Radiation atlas spectrum and HRTS light-bridge spectrum can be satisfactorily reproduced in 1D stratified atmospheres, without including three-dimensional or time-dependent thermal structures. A detailed comparison to observations from 1205 to 1550 Å is presented, and the success of this 1D approach to modeling solar UV H2 emission is illustrated by the identification of previously unidentified lines and upper levels in HRTS spectra.

Oil Sands Operations in Alberta, Canada: A large source of secondary organic aerosol

NASA Astrophysics Data System (ADS)

Liggio, J.; Li, S. M.; Hayden, K.; Taha, Y. M.; Stroud, C.; Darlington, A. L.; Drollette, B.; Gordon, M.; Lee, P.; Liu, P.; Leithead, A.; Moussa, S.; Wang, D.; O'Brien, J.; Mittermeier, R. L.; Brook, J.; Lu, G.; Staebler, R. M.; Han, Y.; Tokarek, T. W.; Osthoff, H. D.; Makar, P.; Zhang, J.; Plata, D.; Gentner, D. R.

2015-12-01

Little is known of the reaction products of emissions to the atmosphere from extraction of oil from unconventional sources in the oil sands (OS) region of Alberta, Canada. This study examines these reaction products, and in particular, the extent to which they form secondary organic aerosol (SOA), which can significantly contribute to regional particulate matter formation. An aircraft measurement campaign was conducted over the Athabasca oil sands region between August 13 and September 7, 2013. A broad suite of measurements were made during 22 flights, including organic aerosol mass and composition with a High Resolution Time of Flight Aerosol Mass Spectrometer (HR-ToF-AMS) and organic aerosol gas-phase precursors by Proton Transfer Reaction (PTR) and off-line gas chromatography mass spectrometry. Large concentrations of organic aerosol were measured downwind of the OS region, which we show to be entirely secondary in nature. Laboratory experiments demonstrated that bitumen (the mined product) contains semi-volatile vapours in the C12-C18 range that will be emitted at ambient temperatures. When oxidized, these vapours form SOA with highly similar HR-ToF-AMS spectra to the SOA measured in the flights. Box modelling of the OS plume evolution indicated that the measured levels of traditional volatile organic compounds (VOCs) are not capable of accounting for the amount of SOA formed in OS plumes. This discrepancy is only reconciled in the model by including bitumen vapours along with their oxidation and condensation into the model. The concentration of bitumen vapours required to produce SOA matching observations is similar to that of traditional VOC precursors of SOA. It was further estimated that the cumulative SOA mass formation approximately 100 km downwind of the OS during these flights, and under these meteorological conditions was up to 82 tonnes/day. The combination of airborne measurements, laboratory experiments and box modelling indicated that semi-volatile organic compounds (SVOC) are emitted from OS operations which accounted for >85% of the formed SOA mass in these plumes. Implications of this SOA formation will be discussed.

Dorsal and ventral stream contributions to form-from-motion perception in a patient with form-from motion deficit: a case report.

PubMed

Mercier, Manuel R; Schwartz, Sophie; Spinelli, Laurent; Michel, Christoph M; Blanke, Olaf

2017-03-01

The main model of visual processing in primates proposes an anatomo-functional distinction between the dorsal stream, specialized in spatio-temporal information, and the ventral stream, processing essentially form information. However, these two pathways also communicate to share much visual information. These dorso-ventral interactions have been studied using form-from-motion (FfM) stimuli, revealing that FfM perception first activates dorsal regions (e.g., MT+/V5), followed by successive activations of ventral regions (e.g., LOC). However, relatively little is known about the implications of focal brain damage of visual areas on these dorso-ventral interactions. In the present case report, we investigated the dynamics of dorsal and ventral activations related to FfM perception (using topographical ERP analysis and electrical source imaging) in a patient suffering from a deficit in FfM perception due to right extrastriate brain damage in the ventral stream. Despite the patient's FfM impairment, both successful (observed for the highest level of FfM signal) and absent/failed FfM perception evoked the same temporal sequence of three processing states observed previously in healthy subjects. During the first period, brain source localization revealed cortical activations along the dorsal stream, currently associated with preserved elementary motion processing. During the latter two periods, the patterns of activity differed from normal subjects: activations were observed in the ventral stream (as reported for normal subjects), but also in the dorsal pathway, with the strongest and most sustained activity localized in the parieto-occipital regions. On the other hand, absent/failed FfM perception was characterized by weaker brain activity, restricted to the more lateral regions. This study shows that in the present case report, successful FfM perception, while following the same temporal sequence of processing steps as in normal subjects, evoked different patterns of brain activity. By revealing a brain circuit involving the most rostral part of the dorsal pathway, this study provides further support for neuro-imaging studies and brain lesion investigations that have suggested the existence of different brain circuits associated with different profiles of interaction between the dorsal and the ventral streams.

International housing construction developments - implications for hardwood utilization

Treesearch

Delton Alderman

2011-01-01

This paper describes the current state of international housing markets, providing general and statistical information on regional housing markets and will posit implications for the future. The emphasis is on regions that use appreciable quantities of wood in housing construction, principally North America, Europe, and Japan. In the past 15 years, housing markets...

Haemophilus ducreyi Cutaneous Ulcer Strains Diverged from Both Class I and Class II Genital Ulcer Strains: Implications for Epidemiological Studies.

PubMed

Gangaiah, Dharanesh; Spinola, Stanley M

2016-12-01

Haemophilus ducreyi has emerged as a major cause of cutaneous ulcers (CU) in yaws-endemic regions of the tropics in the South Pacific, South East Asia and Africa. H. ducreyi was once thought only to cause the genital ulcer (GU) disease chancroid; GU strains belong to 2 distinct classes, class I and class II. Using whole-genome sequencing of 4 CU strains from Samoa, 1 from Vanuatu and 1 from Papua New Guinea, we showed that CU strains diverged from the class I strain 35000HP and that one CU strain expressed β-lactamase. Recently, the Center for Disease Control and Prevention released the genomes of 11 additional CU strains from Vanuatu and Ghana; however, the evolutionary relationship of these CU strains to previously-characterized CU and GU strains is unknown. We performed phylogenetic analysis of 17 CU and 10 GU strains. Class I and class II GU strains formed two distinct clades. The class I strains formed two subclades, one containing 35000HP and HD183 and the other containing the remainder of the class I strains. Twelve of the CU strains formed a subclone under the class I 35000HP subclade, while 2 CU strains formed a subclone under the other class I subclade. Unexpectedly, 3 of the CU strains formed a subclone under the class II clade. Phylogenetic analysis of dsrA-hgbA-ncaA sequences yielded a tree similar to that of whole-genome phylogenetic tree. CU strains diverged from multiple lineages within both class I and class II GU strains. Multilocus sequence typing of dsrA-hgbA-ncaA could be reliably used for epidemiological investigation of CU and GU strains. As class II strains grow relatively poorly and are relatively more susceptible to vancomycin than class I strains, these findings have implications for methods to recover CU strains. Comparison of contemporary CU and GU isolates would help clarify the relationship between these entities.

Methylphenidate and Atomoxetine Inhibit Social Play Behavior through Prefrontal and Subcortical Limbic Mechanisms in Rats

PubMed Central

Achterberg, E.J. Marijke; van Kerkhof, Linda W.M.; Damsteegt, Ruth; Trezza, Viviana

2015-01-01

Positive social interactions during the juvenile and adolescent phases of life, in the form of social play behavior, are important for social and cognitive development. However, the neural mechanisms of social play behavior remain incompletely understood. We have previously shown that methylphenidate and atomoxetine, drugs widely used for the treatment of attention-deficit hyperactivity disorder (ADHD), suppress social play in rats through a noradrenergic mechanism of action. Here, we aimed to identify the neural substrates of the play-suppressant effects of these drugs. Methylphenidate is thought to exert its effects on cognition and emotion through limbic corticostriatal systems. Therefore, methylphenidate was infused into prefrontal and orbitofrontal cortical regions as well as into several subcortical limbic areas implicated in social play. Infusion of methylphenidate into the anterior cingulate cortex, infralimbic cortex, basolateral amygdala, and habenula inhibited social play, but not social exploratory behavior or locomotor activity. Consistent with a noradrenergic mechanism of action of methylphenidate, infusion of the noradrenaline reuptake inhibitor atomoxetine into these same regions also reduced social play. Methylphenidate administration into the prelimbic, medial/ventral orbitofrontal, and ventrolateral orbitofrontal cortex, mediodorsal thalamus, or nucleus accumbens shell was ineffective. Our data show that the inhibitory effects of methylphenidate and atomoxetine on social play are mediated through a distributed network of prefrontal and limbic subcortical regions implicated in cognitive control and emotional processes. These findings increase our understanding of the neural underpinnings of this developmentally important social behavior, as well as the mechanism of action of two widely used treatments for ADHD. PMID:25568111

Rainfall effects on inflow and infiltration in wastewater treatment systems in a coastal plain region.

PubMed

Cahoon, Lawrence B; Hanke, Marc H

2017-04-01

Aging wastewater collection and treatment systems have not received as much attention as other forms of infrastructure, even though they are vital to public health, economic growth, and environmental quality. Inflow and infiltration (I&I) are among potentially widespread problems facing central sewage collection and treatment systems, posing risks of sanitary system overflows (SSOs), system degradation, and water quality impairment, but remain poorly quantified. Whole-system analyses of I&I were conducted by regression analyses of system flow responses to rainfall and temperature for 93 wastewater treatment plants in 23 counties in eastern North Carolina, USA, a coastal plain region with high water tables and generally higher rainfalls than the continental interior. Statistically significant flow responses to rainfall were found in 92% of these systems, with 2-year average I&I values exceeding 10% of rainless system flow in over 40% of them. The effects of rainfall, which can be intense in this coastal region, have region-wide implications for sewer system performance and environmental management. The positive association between rainfall and excessive I&I parallels the effects of storm water runoff on water quality, in that excessive I&I can also drive SSOs, thus confounding water quality protection efforts.

STEREO observations of insitu waves in the vicinity of interplanetary shocks

NASA Astrophysics Data System (ADS)

Golla, T.; MacDowall, R. J.

2017-12-01

We present the high time resolution observations of the in situ waves obtained by the time domain sampler (TDS) of the WAVES experiment on the STEREO spacecraft in the vicinity of typical quasi-perpendicular super-critical interplanetary shocks. We show that often Langmuir waves occur as coherent one dimensional magnetic field aligned wave packets in the upstream regions and persist over large distances. The characteristics of these wave packets are consistent with those of Langmuir solitons formed as a result of oscillatting two stream instability (OTSI). Very intense high frequency waves which are completely different from Langmuir waves occur in the transition regions. These waves occur as very incoherent emissions and exhibit broad fundamental and second harmonic spectral peaks. We identify these waves as electron acoustic waves excited by the electron beams in the transition regions. We also show that very intense low frequency ion sound waves occur in the downstream regions. We discuss the implications of these observations on the theories of (1) strong Langmuir turbulence, (2) beam stabilization, (3) emission mechanisms of solar type II radio bursts, (4) wave-particle interactions responsible for collisionless dissipation, and (5) heating of the downstream plasmas.

Cloning, genomic organization, and chromosomal localization of human citrate transport protein to the DiGeorge/velocardiofacial syndrome minimal critical region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Goldmuntz, E.; Budarf, M.L.; Wang, Zhili

1996-04-15

DiGeorge syndrome (DGS) and velocardiofacial syndrome have been shown to be associated with microdeletions of chromosomal region 22q11. More recently, patients with conotruncal anomaly face syndrome and some nonsyndromic patients with isolated forms of conotruncal cardiac defects have been found to have 22q11 microdeletions as well. The commonly deleted region, called the DiGeorge chromosomal region (DGCR), spans approximately 1.2 mb and is estimated to contain at least 30 genes. We report a computational approach for gene identification that makes use of large-scale sequencing of cosmids from a contig spanning the DGCR. Using this methodology, we have mapped the human homologmore » of a rodent citrate transport protein to the DGCR. We have isolated a partial cDNA containing the complete open reading frame and have determined the genomic structure by comparing the genomic sequence from the cosmid to the sequence of the cDNA clone. Whether the citrate transport protein can be implicated in the biological etiology of DGS or other 22q11 microdeletion syndromes remains to be defined. 36 refs., 3 figs., 1 tab.« less

Core sequence of PAPf39 amyloid fibrils and mechanism of pH-dependent fibril formation: the role of monomer conformation.

PubMed

French, Kinsley C; Makhatadze, George I

2012-12-21

PAPf39, a 39-residue peptide fragment from human prostatic acidic phosphatase, has been shown to form amyloid fibrils in semen (SEVI), which increase HIV infectivity by up to 5 orders of magnitude. The sequence of the PAPf39 fibrillar core was identified using hydrogen-deuterium exchange (HDX) mass spectrometry and protease protection assays. The central and C-terminal regions are highly protected from HDX and proteolytic cleavage and, thus, are part of the fibrillar core. Conversely, the N-terminal region is unprotected from HDX and proteolytic cleavage, suggesting that it is exposed and not part of the fibrillar core. This finding was tested using two N-terminal truncated variants, PAPf39Δ1-8 and PAPf39Δ1-13. Both variants formed amyloid fibrils at neutral pH. However, these variants showed a markedly different pH dependence of fibril formation versus that of PAPf39. PAPf39 fibrils can form at pH 7.7, but not at pH 5.5 or 2.5, while both N-terminally truncated variants can form fibrils at these pH values. Thus, the N-terminal region is not necessary for fibril formation but modulates the pH dependence of PAPf39 fibril formation. PAPf39Δ1-8 and PAPf39Δ1-13 are capable of seeding PAPf39 fibril formation at neutral pH, suggesting that these variants are structurally compatible with PAPf39, yet no mixed fibril formation occurs between the truncated variants and PAPf39 at low pH. This suggests that pH affects the PAPf39 monomer conformational ensemble, which is supported by far-UV circular dichroism spectroscopy. A conceptual model describing the pH dependence of PAPf39 aggregation is proposed and provides potential biological implications.

Diffuse nitrogen loss simulation and impact assessment of stereoscopic agriculture pattern by integrated water system model and consideration of multiple existence forms

NASA Astrophysics Data System (ADS)

Zhang, Yongyong; Gao, Yang; Yu, Qiang

2017-09-01

Agricultural nitrogen loss becomes an increasingly important source of water quality deterioration and eutrophication, even threatens water safety for humanity. Nitrogen dynamic mechanism is still too complicated to be well captured at watershed scale due to its multiple existence forms and instability, disturbance of agricultural management practices. Stereoscopic agriculture is a novel agricultural planting pattern to efficiently use local natural resources (e.g., water, land, sunshine, heat and fertilizer). It is widely promoted as a high yield system and can obtain considerable economic benefits, particularly in China. However, its environmental quality implication is not clear. In our study, Qianyanzhou station is famous for its stereoscopic agriculture pattern of Southern China, and an experimental watershed was selected as our study area. Regional characteristics of runoff and nitrogen losses were simulated by an integrated water system model (HEQM) with multi-objective calibration, and multiple agriculture practices were assessed to find the effective approach for the reduction of diffuse nitrogen losses. Results showed that daily variations of runoff and nitrogen forms were well reproduced throughout watershed, i.e., satisfactory performances for ammonium and nitrate nitrogen (NH4-N and NO3-N) loads, good performances for runoff and organic nitrogen (ON) load, and very good performance for total nitrogen (TN) load. The average loss coefficient was 62.74 kg/ha for NH4-N, 0.98 kg/ha for NO3-N, 0.0004 kg/ha for ON and 63.80 kg/ha for TN. The dominating form of nitrogen losses was NH4-N due to the applied fertilizers, and the most dramatic zones aggregated in the middle and downstream regions covered by paddy and orange orchard. In order to control diffuse nitrogen losses, the most effective practices for Qianyanzhou stereoscopic agriculture pattern were to reduce farmland planting scale in the valley by afforestation, particularly for orchard in the downstream regions, followed by fertilizer application optimization.

Extended asymmetric hot region formation due to shockwave interactions following void collapse in shocked high explosive

DOE PAGES

Shan, Tzu -Ray; Wixom, Ryan R.; Thompson, Aidan P.

2016-08-01

In both continuum hydrodynamics simulations and also multimillion atom reactive molecular dynamics simulations of shockwave propagation in single crystal pentaerythritol tetranitrate (PETN) containing a cylindrical void, we observed the formation of an initial radially symmetric hot spot. By extending the simulation time to the nanosecond scale, however, we observed the transformation of the small symmetric hot spot into a longitudinally asymmetric hot region extending over a much larger volume. Performing reactive molecular dynamics shock simulations using the reactive force field (ReaxFF) as implemented in the LAMMPS molecular dynamics package, we showed that the longitudinally asymmetric hot region was formed bymore » coalescence of the primary radially symmetric hot spot with a secondary triangular hot zone. We showed that the triangular hot zone coincided with a double-shocked region where the primary planar shockwave was overtaken by a secondary cylindrical shockwave. The secondary cylindrical shockwave originated in void collapse after the primary planar shockwave had passed over the void. A similar phenomenon was observed in continuum hydrodynamics shock simulations using the CTH hydrodynamics package. Furthermore, the formation and growth of extended asymmetric hot regions on nanosecond timescales has important implications for shock initiation thresholds in energetic materials.« less

Extended asymmetric hot region formation due to shockwave interactions following void collapse in shocked high explosive

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shan, Tzu -Ray; Wixom, Ryan R.; Thompson, Aidan P.

In both continuum hydrodynamics simulations and also multimillion atom reactive molecular dynamics simulations of shockwave propagation in single crystal pentaerythritol tetranitrate (PETN) containing a cylindrical void, we observed the formation of an initial radially symmetric hot spot. By extending the simulation time to the nanosecond scale, however, we observed the transformation of the small symmetric hot spot into a longitudinally asymmetric hot region extending over a much larger volume. Performing reactive molecular dynamics shock simulations using the reactive force field (ReaxFF) as implemented in the LAMMPS molecular dynamics package, we showed that the longitudinally asymmetric hot region was formed bymore » coalescence of the primary radially symmetric hot spot with a secondary triangular hot zone. We showed that the triangular hot zone coincided with a double-shocked region where the primary planar shockwave was overtaken by a secondary cylindrical shockwave. The secondary cylindrical shockwave originated in void collapse after the primary planar shockwave had passed over the void. A similar phenomenon was observed in continuum hydrodynamics shock simulations using the CTH hydrodynamics package. Furthermore, the formation and growth of extended asymmetric hot regions on nanosecond timescales has important implications for shock initiation thresholds in energetic materials.« less

Non-robust dynamic inferences from macroeconometric models: Bifurcation stratification of confidence regions

NASA Astrophysics Data System (ADS)

Barnett, William A.; Duzhak, Evgeniya Aleksandrovna

2008-06-01

Grandmont [J.M. Grandmont, On endogenous competitive business cycles, Econometrica 53 (1985) 995-1045] found that the parameter space of the most classical dynamic models is stratified into an infinite number of subsets supporting an infinite number of different kinds of dynamics, from monotonic stability at one extreme to chaos at the other extreme, and with many forms of multiperiodic dynamics in between. The econometric implications of Grandmont’s findings are particularly important, if bifurcation boundaries cross the confidence regions surrounding parameter estimates in policy-relevant models. Stratification of a confidence region into bifurcated subsets seriously damages robustness of dynamical inferences. Recently, interest in policy in some circles has moved to New-Keynesian models. As a result, in this paper we explore bifurcation within the class of New-Keynesian models. We develop the econometric theory needed to locate bifurcation boundaries in log-linearized New-Keynesian models with Taylor policy rules or inflation-targeting policy rules. Central results needed in this research are our theorems on the existence and location of Hopf bifurcation boundaries in each of the cases that we consider.

Effect of Intrinsic Twist on Length of Crystalline and Disordered Regions in Cellulose Microfibrils

NASA Astrophysics Data System (ADS)

Nili, Abdolmadjid; Shklyaev, Oleg; Zhao, Zhen; Zhong, Linghao; Crespi, Vincent

2013-03-01

Cellulose is the most abundant biological material in the world. It provides mechanical reinforcement for plant cell wall, and could potentially serve as renewable energy source for biofuel. Native cellulose forms a non-centrosymmetric chiral crystal due to lack of roto-inversion symmetry of constituent glucose chains. Chirality of cellulose crystal could result in an overall twist. Competition between unwinding torsional/extensional and twisting energy terms leads to twist induced frustration along fibril's axis. The accumulated frustration could be the origin of periodic disordered regions observed in cellulose microfibrils. These regions could play significant role in properties of cellulose bundles and ribbons as well as biological implications on plant cell walls. We propose a mechanical model based on Frenkel-Kontorova mechanism to investigate effects of radius dependent twist on crystalline size in cellulose microfibrils. Parameters of the model are adjusted according to all-atom molecular simulations. This work is supported by the US Department of Energy, Office of Basic Energy Sciences as part of The Center for LignoCellulose Structure and Formation, an Energy Frontier Research Center

Surface energetics and protein-protein interactions: analysis and mechanistic implications

PubMed Central

Peri, Claudio; Morra, Giulia; Colombo, Giorgio

2016-01-01

Understanding protein-protein interactions (PPI) at the molecular level is a fundamental task in the design of new drugs, the prediction of protein function and the clarification of the mechanisms of (dis)regulation of biochemical pathways. In this study, we use a novel computational approach to investigate the energetics of aminoacid networks located on the surface of proteins, isolated and in complex with their respective partners. Interestingly, the analysis of individual proteins identifies patches of surface residues that, when mapped on the structure of their respective complexes, reveal regions of residue-pair couplings that extend across the binding interfaces, forming continuous motifs. An enhanced effect is visible across the proteins of the dataset forming larger quaternary assemblies. The method indicates the presence of energetic signatures in the isolated proteins that are retained in the bound form, which we hypothesize to determine binding orientation upon complex formation. We propose our method, BLUEPRINT, as a complement to different approaches ranging from the ab-initio characterization of PPIs, to protein-protein docking algorithms, for the physico-chemical and functional investigation of protein-protein interactions. PMID:27050828

Long-term depression at the mossy fiber-deep cerebellar nucleus synapse.

PubMed

Zhang, Wei; Linden, David J

2006-06-28

Several lines of evidence have indicated that the deep cerebellar nuclei (DCN) are a site of memory storage for certain forms of motor learning, most notably associative eyelid conditioning. In particular, these experiments, together with network models, have implicated the excitatory glutamatergic synapse between mossy fibers and DCN neurons in this memory trace. However, to date, evidence for persistent use-dependent change in the strength of this synapse has been almost entirely absent. Here, we report that high-frequency burst stimulation of mossy fibers, either alone or paired with postsynaptic depolarization, gives rise to long-term depression (LTD) of the mossy fiber-DCN synapse. This form of LTD is not associated with changes in the paired-pulse ratio and is blocked by loading with a postsynaptic Ca2+ chelator but not by bath application of an NMDA receptor antagonist. Mossy fiber-DCN LTD requires activation of a group I metabotropic glutamate receptor (mGluR) and protein translation. Unlike mGluR/translation-dependent LTD in other brain regions, this form of LTD requires mGluR1 and is mGluR5 independent.

Academic stress and personality interact to increase the neural response to high-calorie food cues.

PubMed

Neseliler, Selin; Tannenbaum, Beth; Zacchia, Maria; Larcher, Kevin; Coulter, Kirsty; Lamarche, Marie; Marliss, Errol B; Pruessner, Jens; Dagher, Alain

2017-09-01

Psychosocial stress is associated with an increased intake of palatable foods and weight gain in stress-reactive individuals. Personality traits have been shown to predict stress-reactivity. However, it is not known if personality traits influence brain activity in regions implicated in appetite control during psychosocial stress. The current study assessed whether Gray's Behavioural Inhibition System (BIS) scale, a measure of stress-reactivity, was related to the activity of brain regions implicated in appetite control during a stressful period. Twenty-two undergraduate students participated in a functional magnetic resonance imaging (fMRI) experiment once during a non-exam period and once during final exams in a counter-balanced order. In the scanner, they viewed food and scenery pictures. In the exam compared with the non-exam condition, BIS scores related to increased perceived stress and correlated with increased blood-oxygen-level dependent (BOLD) response to high-calorie food images in regions implicated in food reward and subjective value, such as the ventromedial prefrontal cortex, (vmPFC) and the amygdala. BIS scores negatively related to the functional connectivity between the vmPFC and the dorsolateral prefrontal cortex. The results demonstrate that the BIS trait influences stress reactivity. This is observed both as an increased activity in brain regions implicated in computing the value of food cues and decreased connectivity of these regions to prefrontal regions implicated in self-control. This suggests that the effects of real life stress on appetitive brain function and self-control is modulated by a personality trait. This may help to explain why stressful periods can lead to overeating in vulnerable individuals. Copyright © 2017 Elsevier Ltd. All rights reserved.

THE EVOLUTION OF CIRCUMPLANETARY DISKS AROUND PLANETS IN WIDE ORBITS: IMPLICATIONS FOR FORMATION THEORY, OBSERVATIONS, AND MOON SYSTEMS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shabram, Megan; Boley, Aaron C.

2013-04-10

Using radiation hydrodynamics simulations, we explore the evolution of circumplanetary disks around wide-orbit proto-gas giants. At large distances from the star ({approx}100 AU), gravitational instability followed by disk fragmentation can form low-mass substellar companions (massive gas giants and/or brown dwarfs) that are likely to host large disks. We examine the initial evolution of these subdisks and their role in regulating the growth of their substellar companions, as well as explore consequences of their interactions with circumstellar material. We find that subdisks that form in the context of GIs evolve quickly from a very massive state. Long-term accretion rates from themore » subdisk onto the proto-gas giant reach {approx}0.3 Jupiter masses kyr{sup -1}. We also find consistency with previous simulations, demonstrating that subdisks are truncated at {approx}1/3 of the companion's Hill radius and are thick, with (h/r) of {approx}> 0.2. The thickness of subdisks draws to question the use of thin-disk approximations for understanding the behavior of subdisks, and the morphology of subdisks has implications for the formation and extent of satellite systems. These subdisks create heating events in otherwise cold regions of the circumstellar disk and serve as planet formation beacons that can be detected by instruments such as ALMA.« less

Uncertain Representations of Sub-Grid Pollutant Transport in Chemistry-Transport Models and Impacts on Long-Range Transport and Global Composition

NASA Technical Reports Server (NTRS)

Pawson, Steven; Zhu, Z.; Ott, L. E.; Molod, A.; Duncan, B. N.; Nielsen, J. E.

2009-01-01

Sub-grid transport, by convection and turbulence, is known to play an important role in lofting pollutants from their source regions. Consequently, the long-range transport and climatology of simulated atmospheric composition are impacted. This study uses the Goddard Earth Observing System, Version 5 (GEOS-5) atmospheric model to study pollutant transport. The baseline model uses a Relaxed Arakawa-Schubert (RAS) scheme that represents convection through a sequence of linearly entraining cloud plumes characterized by unique detrainment levels. Thermodynamics, moisture and trace gases are transported in the same manner. Various approximate forms of trace-gas transport are implemented, in which the box-averaged cloud mass fluxes from RAS are used with different numerical approaches. Substantial impacts on forward-model simulations of CO (using a linearized chemistry) are evident. In particular, some aspects of simulations using a diffusive form of sub-grid transport bear more resemblance to space-biased CO observations than do the baseline simulations with RAS transport. Implications for transport in the real atmosphere will be discussed. Another issue of importance is that many adjoint/inversion computations use simplified representations of sub-grid transport that may be inconsistent with the forward models: implications will be discussed. Finally, simulations using a complex chemistry model in GEOS-5 (in place of the linearized CO model) are underway: noteworthy results from this simulation will be mentioned.

Forming Spirals From Shadows

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2016-07-01

What causes the large-scale spiral structures found in some protoplanetary disks? Most models assume theyre created by newly-forming planets, but a new study suggests that planets might have nothing to do with it.Perturbations from Planets?In some transition disks protoplanetary disks with gaps in their inner regions weve directly imaged large-scale spiral arms. Many theories currently attribute the formation of these structures to young planets: either the direct perturbations of a planet embedded in the disk cause the spirals, or theyre indirectly caused by the orbit of a planetary body outside of the arms.Another example of spiral arms detected in a protoplanetary disk, MWC 758. [NASA/ESA/ESO/M. Benisty et al.]But what if you could get spirals without any planets? A team of scientists led by Matas Montesinos (University of Chile) have recently published a study in which they examine what happens to a shadowed protoplanetary disk.Casting Shadows with WarpsIn the teams setup, they envision a protoplanetary disk that is warped: the inner region is slightly tilted relative to the outer region. As the central star casts light out over its protoplanetary disk, this disk warping would cause some regions of the disk to be shaded in a way that isnt axially symmetric with potentially interesting implications.Montesinos and collaborators ran 2D hydrodynamics simulations to determine what happens to the motion of particles within the disk when they pass in and out of the shadowed regions. Since the shadowed regions are significantly colder than the illuminated disk, the pressure in these regions is much lower. Particles are therefore accelerated and decelerated as they pass through these regions, and the lack of axial symmetry causes spiral density waves to form in the disk as a result.Initial profile for the stellar heating rate per unit area for one of the authors simulations. The regions shadowed as a result of the disk warp subtend 0.5 radians each (shown on the left and right sides of the disks here). [Montesinos et al. 2016]Observations of Shadow SpiralsIn the authors models, two shadowed regions result in the formation of two spiral arms. The arms that develop start at a pitch angle of 1522, and gradually evolve to a shallower 1114 pitch at distances of ~65150 AU.The more luminous the central star, the more quickly the spiral arms form, due to the greater contrast between illuminated and shadowed disk regions: for a 0.25 solar-mass disk illuminated by a 1 solar-luminosity star, arms start to form after about 2500 orbits. If we increasethe stars brightness to 100 solar luminosities, the arms form after only 150 orbits.Montesinos and collaborators conclude by testing whether or not such spiral structures would be observable. They use a 3D radiative transfer code to produce scattered-light predictions of what the disk would look like to direct-imaging telescopes. They find that these shadow-induced spirals should be detectable.This first study clearly demonstrates that large-scale spiral density waves can form in protoplanetary disks without the presence of planets. The authors now plan to add more detailed physics to their models to better understand what we might observe when looking at systems that were shapedin this way.Density evolution in two shadowed disks. Top row: disk illuminated by a 100 L star, at 150, 250, and 500 orbits (from left to right). Bottom row: disk illuminated by a 1 L star, at 2500, 3500, and 4000 orbits. The rightmost top and bottom panels show control simulations (no shadows were present on the disk) after 1000 and 6000 orbits. (A different type of spiral starts to develop in the bottom control simulation as a result of a gravitational instability, but it never extends to the edges of the disk.) [Montesinos et al. 2016]CitationMatas Montesinos et al 2016 ApJ 823 L8. doi:10.3847/2041-8205/823/1/L8

Transport of Aerosols: Regional and Global Implications for Climate, Weather, and Air Quality

NASA Technical Reports Server (NTRS)

Chin, Mian; Diehl, Thomas; Yu, Hongbin; Bian, Huisheng; Remer, Lorraine; Kahn, Ralph

2008-01-01

Long-range transport of atmospheric aerosols can have a significant impact on global climate, regional weather, and local air quality. In this study, we use a global model GOCART together with satellite data and ground-based measurements to assess the emission and transport of pollution, dust, biomass burning, and volcanic aerosols and their implications. In particular, we will show the impact of emissions and long-range transport of aerosols from major pollution and dust source regions to (1) the surface air quality, (2) the atmospheric heating rates, and (3) surface radiation change near the source and downwind regions.

A web-based multicriteria evaluation of spatial trade-offs between environmental and economic implications from hydraulic fracturing in a shale gas region in Ohio.

PubMed

Liu, X; Gorsevski, P V; Yacobucci, M M; Onasch, C M

2016-06-01

Planning of shale gas infrastructure and drilling sites for hydraulic fracturing has important spatial implications. The evaluation of conflicting and competing objectives requires an explicit consideration of multiple criteria as they have important environmental and economic implications. This study presents a web-based multicriteria spatial decision support system (SDSS) prototype with a flexible and user-friendly interface that could provide educational or decision-making capabilities with respect to hydraulic fracturing site selection in eastern Ohio. One of the main features of this SDSS is to emphasize potential trade-offs between important factors of environmental and economic ramifications from hydraulic fracturing activities using a weighted linear combination (WLC) method. In the prototype, the GIS-enabled analytical components allow spontaneous visualization of available alternatives on maps which provide value-added features for decision support processes and derivation of final decision maps. The SDSS prototype also facilitates nonexpert participation capabilities using a mapping module, decision-making tool, group decision module, and social media sharing tools. The logical flow of successively presented forms and standardized criteria maps is used to generate visualization of trade-off scenarios and alternative solutions tailored to individual user's preferences that are graphed for subsequent decision-making.

Novel TDP2-ubiquitin interactions and their importance for the repair of topoisomerase II-mediated DNA damage

PubMed Central

Rao, Timsi; Gao, Rui; Takada, Saeko; Al Abo, Muthana; Chen, Xiang; Walters, Kylie J.; Pommier, Yves; Aihara, Hideki

2016-01-01

Tyrosyl DNA phosphodiesterase 2 (TDP2) is a multifunctional protein implicated in DNA repair, signal transduction and transcriptional regulation. In its DNA repair role, TDP2 safeguards genome integrity by hydrolyzing 5′-tyrosyl DNA adducts formed by abortive topoisomerase II (Top2) cleavage complexes to allow error-free repair of DNA double-strand breaks, thereby conferring cellular resistance against Top2 poisons. TDP2 consists of a C-terminal catalytic domain responsible for its phosphodiesterase activity, and a functionally uncharacterized N-terminal region. Here, we demonstrate that this N-terminal region contains a ubiquitin (Ub)-associated (UBA) domain capable of binding multiple forms of Ub with distinct modes of interactions and preference for either K48- or K63-linked polyUbs over monoUb. The structure of TDP2 UBA bound to monoUb shows a canonical mode of UBA-Ub interaction. However, the absence of the highly conserved MGF motif and the presence of a fourth α-helix make TDP2 UBA distinct from other known UBAs. Mutations in the TDP2 UBA-Ub binding interface do not affect nuclear import of TDP2, but severely compromise its ability to repair Top2-mediated DNA damage, thus establishing the importance of the TDP2 UBA–Ub interaction in DNA repair. The differential binding to multiple Ub forms could be important for responding to DNA damage signals under different contexts or to support the multi-functionality of TDP2. PMID:27543075

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wurzburg, Beth A; Jardetzky, Theodore S; Stanford)

The structure of immunoglobulin E (IgE)-Fc 3-4 has been solved in three new crystal forms, providing 13 snapshots of the Fc conformation and revealing a diverse range of open-closed motions among subunit chains and dimers. A more detailed analysis of the open-to-closed motion of IgE-Fc 3-4 was possible with so many structures, and the new structures allow a more thorough examination of the flexibility of IgE-Fc and its implications for receptor binding. The existence of a hydrophobic pocket at the elbow region of the Fc appears to be conformation dependent and suggests a means of regulating the IgE-Fc conformation (andmore » potentially receptor binding) with small molecules.« less

Selectively altering belief formation in the human brain

PubMed Central

Sharot, Tali; Kanai, Ryota; Marston, David; Korn, Christoph W.; Rees, Geraint; Dolan, Raymond J.

2012-01-01

Humans form beliefs asymmetrically; we tend to discount bad news but embrace good news. This reduced impact of unfavorable information on belief updating may have important societal implications, including the generation of financial market bubbles, ill preparedness in the face of natural disasters, and overly aggressive medical decisions. Here, we selectively improved people’s tendency to incorporate bad news into their beliefs by disrupting the function of the left (but not right) inferior frontal gyrus using transcranial magnetic stimulation, thereby eliminating the engrained “good news/bad news effect.” Our results provide an instance of how selective disruption of regional human brain function paradoxically enhances the ability to incorporate unfavorable information into beliefs of vulnerability. PMID:23011798

Brief communication: Impacts of a developing polynya off Commonwealth Bay, East Antarctica, triggered by grounding of iceberg B09B

NASA Astrophysics Data System (ADS)

Fogwill, Christopher J.; van Sebille, Erik; Cougnon, Eva A.; Turney, Chris S. M.; Rintoul, Steve R.; Galton-Fenzi, Benjamin K.; Clark, Graeme F.; Marzinelli, E. M.; Rainsley, Eleanor B.; Carter, Lionel

2016-11-01

The dramatic calving of the Mertz Glacier tongue in 2010, precipitated by the movement of iceberg B09B, reshaped the oceanographic regime across the Mertz Polynya and Commonwealth Bay, regions where high-salinity shelf water (HSSW) - the precursor to Antarctic bottom water (AABW) - is formed. Here we present post-calving observations that suggest that this reconfiguration and subsequent grounding of B09B have driven the development of a new polynya and associated HSSW production off Commonwealth Bay. Supported by satellite observations and modelling, our findings demonstrate how local icescape changes may impact the formation of HSSW, with potential implications for large-scale ocean circulation.

Role of medial prefrontal cortex Narp in the extinction of morphine conditioned place preference.

PubMed

Blouin, Ashley M; Han, Sungho; Pearce, Anne M; Cheng, Kailun; Lee, Jongah J; Johnson, Alexander W; Wang, Chuansong; During, Matthew J; Holland, Peter C; Shaham, Yavin; Baraban, Jay M; Reti, Irving M

2013-01-15

Narp knockout (KO) mice demonstrate an impaired extinction of morphine conditioned place preference (CPP). Because the medial prefrontal cortex (mPFC) has been implicated in extinction learning, we tested whether Narp cells in this region play a role in the extinction of morphine CPP. We found that intracranial injections of adenoassociated virus (AAV) expressing wild-type (WT) Narp into the mPFC of Narp KO mice rescued the extinction and the injection of AAV expressing a dominant negative form of Narp (NarpN) into the mPFC of WT mice impaired the extinction of morphine CPP. These findings suggest that Narp in the mPFC mediates the extinction of morphine CPP.

Mapping Historic Gypsy Moth Defoliation with MODIS Satellite Data: Implications for Forest Threat Early Warning System

NASA Technical Reports Server (NTRS)

Spurce, Joseph P.; Hargrove, William; Ryan, Robert E.; Smooth, James C.; Prados, Don; McKellip, Rodney; Sader, Steven A.; Gasser, Jerry; May, George

2008-01-01

This viewgraph presentation reviews a project, the goal of which is to study the potential of MODIS data for monitoring historic gypsy moth defoliation. A NASA/USDA Forest Service (USFS) partnership was formed to perform the study. NASA is helping USFS to implement satellite data products into its emerging Forest Threat Early Warning System. The latter system is being developed by the USFS Eastern and Western Forest Threat Assessment Centers. The USFS Forest Threat Centers want to use MODIS time series data for regional monitoring of forest damage (e.g., defoliation) preferably in near real time. The study's methodology is described, and the results of the study are shown.

The Galactic Distribution of Massive Star Formation from the Red MSX Source Survey

NASA Astrophysics Data System (ADS)

Figura, Charles C.; Urquhart, J. S.

2013-01-01

Massive stars inject enormous amounts of energy into their environments in the form of UV radiation and molecular outflows, creating HII regions and enriching local chemistry. These effects provide feedback mechanisms that aid in regulating star formation in the region, and may trigger the formation of subsequent generations of stars. Understanding the mechanics of massive star formation presents an important key to understanding this process and its role in shaping the dynamics of galactic structure. The Red MSX Source (RMS) survey is a multi-wavelength investigation of ~1200 massive young stellar objects (MYSO) and ultra-compact HII (UCHII) regions identified from a sample of colour-selected sources from the Midcourse Space Experiment (MSX) point source catalog and Two Micron All Sky Survey. We present a study of over 900 MYSO and UCHII regions investigated by the RMS survey. We review the methods used to determine distances, and investigate the radial galactocentric distribution of these sources in context with the observed structure of the galaxy. The distribution of MYSO and UCHII regions is found to be spatially correlated with the spiral arms and galactic bar. We examine the radial distribution of MYSOs and UCHII regions and find variations in the star formation rate between the inner and outer Galaxy and discuss the implications for star formation throughout the galactic disc.

Flanking HS-62.5 and 3' HS1, and regions upstream of the LCR, are not required for beta-globin transcription.

PubMed

Bender, M A; Byron, Rachel; Ragoczy, Tobias; Telling, Agnes; Bulger, Michael; Groudine, Mark

2006-08-15

The locus control region (LCR) was thought to be necessary and sufficient for establishing and maintaining an open beta-globin locus chromatin domain in the repressive environment of the developing erythrocyte. However, deletion of the LCR from the endogenous locus had no significant effect on chromatin structure and did not silence transcription. Thus, the cis-regulatory elements that confer the open domain remain unidentified. The conserved DNaseI hypersensitivity sites (HSs) HS-62.5 and 3'HS1 that flank the locus, and the region upstream of the LCR have been implicated in globin gene regulation. The flanking HSs bind CCCTC binding factor (CTCF) and are thought to interact with the LCR to form a "chromatin hub" involved in beta-globin gene activation. Hispanic thalassemia, a deletion of the LCR and 27 kb upstream, leads to heterochromatinization and silencing of the locus. Thus, the region upstream of the LCR deleted in Hispanic thalassemia (upstream Hispanic region [UHR]) may be required for expression. To determine the importance of the UHR and flanking HSs for beta-globin expression, we generated and analyzed mice with targeted deletions of these elements. We demonstrate deletion of these regions alone, and in combination, do not affect transcription, bringing into question current models for the regulation of the beta-globin locus.

Region-specific deletions of RIM1 reproduce a subset of global RIM1α−/− phenotypes

PubMed Central

Haws, M E; Kaeser, P S; Jarvis, D L; Südhof, T C; Powell, C M

2012-01-01

The presynaptic protein RIM1α mediates multiple forms of presynaptic plasticity at both excitatory and inhibitory synapses. Previous studies of mice lacking RIM1α (RIM1α−/− throughout the brain showed that deletion of RIM1α results in multiple behavioral abnormalities. In an effort to begin to delineate the brain regions in which RIM1 deletion mediates these abnormal behaviors, we used conditional (floxed) RIM1 knockout mice (fRIM1). By crossing these fRIM1 mice to previously characterized transgenic cre lines, we aimed to delete RIM1 selectively in the dentate gyrus (DG), using a specific preproopiomelanocortin promoter driving cre recombinase (POMC-cre) line , and in pyramidal neurons of the CA3 region of hippocampus, using the kainate receptor subunit 1 promoter driving cre recombinase (KA-cre). Neither of these cre driver lines was uniquely selective to the targeted regions. In spite of this, we were able to reproduce a subset of the global RIM1α−/− behavioral abnormalities, thereby narrowing the brain regions in which loss of RIM1 is sufficient to produce these behavioral differences. Most interestingly, hypersensitivity to the pyschotomimetic MK-801 was shown in mice lacking RIM1 selectively in the DG, arcuate nucleus of the hypothalamus and select cerebellar neurons, implicating novel brain regions and neuronal subtypes in this behavior. PMID:22103334

The Delivery of Water During Terrestrial Planet Formation

NASA Astrophysics Data System (ADS)

O'Brien, David P.; Izidoro, Andre; Jacobson, Seth A.; Raymond, Sean N.; Rubie, David C.

2018-02-01

The planetary building blocks that formed in the terrestrial planet region were likely very dry, yet water is comparatively abundant on Earth. Here we review the various mechanisms proposed for the origin of water on the terrestrial planets. Various in-situ mechanisms have been suggested, which allow for the incorporation of water into the local planetesimals in the terrestrial planet region or into the planets themselves from local sources, although all of those mechanisms have difficulties. Comets have also been proposed as a source, although there may be problems fitting isotopic constraints, and the delivery efficiency is very low, such that it may be difficult to deliver even a single Earth ocean of water this way. The most promising route for water delivery is the accretion of material from beyond the snow line, similar to carbonaceous chondrites, that is scattered into the terrestrial planet region as the planets are growing. Two main scenarios are discussed in detail. First is the classical scenario in which the giant planets begin roughly in their final locations and the disk of planetesimals and embryos in the terrestrial planet region extends all the way into the outer asteroid belt region. Second is the Grand Tack scenario, where early inward and outward migration of the giant planets implants material from beyond the snow line into the asteroid belt and terrestrial planet region, where it can be accreted by the growing planets. Sufficient water is delivered to the terrestrial planets in both scenarios. While the Grand Tack scenario provides a better fit to most constraints, namely the small mass of Mars, planets may form too fast in the nominal case discussed here. This discrepancy may be reduced as a wider range of initial conditions is explored. Finally, we discuss several more recent models that may have important implications for water delivery to the terrestrial planets.

Geologic and geomorphic controls on the occurrence of fens in the Oregon Cascades and implications for vulnerability and conservation

USGS Publications Warehouse

Aldous, A.; Gannett, Marshall W.; Keith, Mackenzie K.; O'Connor, James E.

2015-01-01

Montane fens are biologically diverse peat-forming wetlands that develop at points of groundwater discharge. To protect these ecosystems, it is critical to understand their locations on the landscape and the hydrogeologic systems that support them. The upper Deschutes Basin has a groundwater flow system that supports baseflow in many rivers, but little is known about the wetland types and groundwater dependence of the thousands of wetlands within the watershed. In 292 randomly selected wetlands, we quantified landscape metrics thought useful for discriminating montane fens from non-peat-forming wetlands. We inspected these wetlands and classified 67 of them as fens. Of the landscape metrics, only geology reliably differentiated fens from other types of wetlands. Nearly all fens develop in low-permeability glacial till found at approximately 1400–1800 m in elevation, and are concentrated in areas mantled by pumice deposits that originated primarily from the eruption of Mt. Mazama approximately 7700 years BP. Stratigraphic and hydrologic factors indicate the fens are supplied by perched aquifers in glacial till, instead of the deeper regional aquifer system. Their hydrogeologic setting makes the fens highly vulnerable to expected changes to recharge associated with climate change, but not to groundwater pumping from the regional aquifer.

A survey of ABCA1 sequence variation confirms association with dementia

PubMed Central

Reynolds, Chandra A.; Hong, Mun-Gwan; Eriksson, Ulrika K.; Blennow, Kaj; Bennet, Anna M.; Johansson, Boo; Malmberg, Bo; Berg, Stig; Wiklund, Fredrik; Gatz, Margaret; Pedersen, Nancy L.; Prince, Jonathan A.

2009-01-01

We and others have conducted targeted genetic association analyses of ABCA1 in relation to Alzheimer disease risk with a resultant mixture of both support and refutation, but all previous studies have been based upon only a few markers. Here, a detailed survey of genetic variation in the ABCA1 region has been performed in a total of 1567 Swedish dementia cases (including 1275 with Alzheimer disease) and 2203 controls, providing evidence of association with maximum significance at marker rs2230805 (OR = 1.39; 95% CI 1.23–1.57, P = 7.7 × 10−8). Haplotype-based tests confirmed association of this genomic region after excluding rs2230805, and imputation did not reveal additional markers with greater support. Significantly associating markers reside in two distinct linkage disequilibrium blocks with maxima near the promoter and in the terminal exon of a truncated ABCA1 splice-form. The putative risk allele of rs2230805 was also found to be associated with reduced cerebrospinal fluid levels of β-amyloid. The strongest evidence of association was obtained when all forms of dementia were considered together, but effect sizes were similar when only confirmed Alzheimer disease cases were assessed. Results further implicate ABCA1 in dementia, reinforcing the putative involvement of lipid transport in neurodegenerative disease. PMID:19606474

Cocaine-conditioned odor cues without chronic exposure: Implications for the development of addiction vulnerability.

PubMed

Lowen, Steven B; Rohan, Michael L; Gillis, Timothy E; Thompson, Britta S; Wellons, Clara B W; Andersen, Susan L

2015-01-01

Adolescents are highly vulnerable to addiction and are four times more likely to become addicted at first exposure than at any other age. The dopamine D1 receptor, which is typically overexpressed in the normal adolescent prefrontal cortex, is involved in drug cue responses and is associated with relapse in animal models. In human drug addicts, imaging methods have detected increased activation in response to drug cues in reward- and habit-associated brain regions. These same methods can be applied more quantitatively to rodent models. Here, changes in neuronal activation in response to cocaine-conditioned cues were observed using functional magnetic resonance imaging in juvenile rats that were made to over-express either D1 receptors or green fluorescent protein by viral-mediated transduction. Reduced activation was observed in the amygdala and dopamine cell body regions in the low cue-preferring/control juvenile rats in response to cocaine cues. In contrast, increased activation was observed in the dorsal striatum, nucleus accumbens, prefrontal cortex, and dopamine cell bodies in high cue-preferring/D1 juveniles. The increase in cue salience that is mediated by increased D1 receptor density, rather than excessive cocaine experience, appears to underlie the transition from aversion to reward in cue-induced neural response and may form the basis for habit-forming vulnerability.

Cisplatin carbonato complexes. Implications for uptake, antitumor properties, and toxicity.

PubMed

Centerwall, Corey R; Goodisman, Jerry; Kerwood, Deborah J; Dabrowiak, James C

2005-09-21

The reaction of aquated cisplatin with carbonate which is present in culture media and blood is described. The first formed complex is a monochloro monocarbonato species, which upon continued exposure to carbonate slowly forms a biscarbonato complex. The formation of carbonato species under conditions that simulate therapy may have important implications for uptake, antitumor properties, and toxicity of cisplatin.

Geologic Map of the Niobe Planitia Quadrangle (V-23), Venus

USGS Publications Warehouse

Hansen, Vicki L.

2009-01-01

The Niobe Planitia quadrangle (V-23) encompasses approximately 8,000,000 km2 of the Venusian equatorial region extending from lat 0 deg to 25 deg N. and from long 90 deg to 120 deg E. (approximately 9,500 15-minute quadrangles on Earth). The map area lies along the north margin of the equatorial highland, Aphrodite Terra (V-35), and extends into the lowland region to the north, preserving a transition from southern highlands to northern lowlands (figs. 1, 2, map sheet). The northern parts of the crustal plateau, Ovda Regio and Haasttse-baad Tessera, mark the south margin of the map area; Niobe and Sogolon Planitiae make up the lowland region. The division between Niobe and Sogolon Planitiae is generally topographic, and Sogolon Planitia forms a relatively small elongate basin. Mesolands, the intermediate topographic level of Venus, are essentially absent or represented only by Gegute Tessera, which forms a slightly elevated region that separates Niobe Planitia from Llorona Planitia to the east (V-24). Lowlands within the map area host five features currently classified as coronae: Maya Corona (lat 23 deg N., long 97 deg E.) resides to the northwest and Dhisana, Allatu, Omeciuatl, and Bhumiya Coronae cluster loosely in the east-central area. Lowlands extend north, east, and west of the map area. Mapping the Niobe Planitia quadrangle (V-23) provides an excellent opportunity to examine a large tract of lowlands and the adjacent highlands with the express goal of clarifying the processes responsible for resurfacing this part of Venus and the resulting implications for Venus evolution. Although Venus lowlands are widely considered to have a volcanic origin, lowlands in the map area lack adjacent coronae or other obvious volcanic sources.

Methamphetamine-induced sensitization differentially alters pCREB and DeltaFosB throughout the limbic circuit of the mammalian brain.

PubMed

McDaid, John; Graham, Martin P; Napier, T Celeste

2006-12-01

Enhancements in behavior that accompany repeated, intermittent administration of abused drugs (sensitization) endure long after drug administration has ceased. Such persistence reflects changes in intracellular signaling cascades and associated gene transcription factors in brain regions that are engaged by abused drugs. This process is not characterized for the most potent psychomotor stimulant, methamphetamine. Using motor behavior as an index of brain state in rats, we verified that five once-daily injections of 2.5 mg/kg methamphetamine induced behavioral sensitization that was demonstrated (expressed) 3 and 14 days later. Using immunoblot procedures, limbic brain regions implicated in behavioral sensitization were assayed for extracellular signal-regulated kinase and its phosphorylated form (pERK/ERK, a signal transduction kinase), cAMP response element binding protein and its phosphorylated form (pCREB/CREB, a constitutively expressed transcriptional regulator), and DeltaFosB (a long-lasting transcription factor). pERK, ERK, and CREB levels were not changed for any region assayed. In the ventral tegmental area, pCREB and DeltaFosB also were not changed. pCREB (activated CREB) was elevated in the frontal cortex at 3 days withdrawal, but not at 14 days. pCREB levels were decreased at 14 days withdrawal in the nucleus accumbens and ventral pallidum. Accumbal and pallidal levels of DeltaFosB were increased at 3 days withdrawal, and this increase persisted to 14 days in the pallidum. Thus, only the ventral pallidum showed changes in molecular processes that consistently correlated with motor sensitization, revealing that this region may be associated with this enduring behavioral phenotype initiated by methamphetamine. The present findings expand our understanding of the neuroanatomical and molecular substrates that may play a role in the persistence of druginduced sensitization.

Direct Measurements of Dust Attenuation in z ~ 1.5 Star-forming Galaxies from 3D-HST: Implications for Dust Geometry and Star Formation Rates

NASA Astrophysics Data System (ADS)

Price, Sedona H.; Kriek, Mariska; Brammer, Gabriel B.; Conroy, Charlie; Förster Schreiber, Natascha M.; Franx, Marijn; Fumagalli, Mattia; Lundgren, Britt; Momcheva, Ivelina; Nelson, Erica J.; Skelton, Rosalind E.; van Dokkum, Pieter G.; Whitaker, Katherine E.; Wuyts, Stijn

2014-06-01

The nature of dust in distant galaxies is not well understood, and until recently few direct dust measurements have been possible. We investigate dust in distant star-forming galaxies using near-infrared grism spectra of the 3D-HST survey combined with archival multi-wavelength photometry. These data allow us to make a direct comparison between dust around star-forming regions (A V, H II ) and the integrated dust content (A V, star). We select a sample of 163 galaxies between 1.36 <= z <= 1.5 with Hα signal-to-noise ratio >=5 and measure Balmer decrements from stacked spectra to calculate A V, H II . First, we stack spectra in bins of A V, star, and find that A V, H II = 1.86 A V, star, with a significance of σ = 1.7. Our result is consistent with the two-component dust model, in which galaxies contain both diffuse and stellar birth cloud dust. Next, we stack spectra in bins of specific star formation rate (log SSFR), star formation rate (log SFR), and stellar mass (log M *). We find that on average A V, H II increases with SFR and mass, but decreases with increasing SSFR. Interestingly, the data hint that the amount of extra attenuation decreases with increasing SSFR. This trend is expected from the two-component model, as the extra attenuation will increase once older stars outside the star-forming regions become more dominant in the galaxy spectrum. Finally, using Balmer decrements we derive dust-corrected Hα SFRs, and find that stellar population modeling produces incorrect SFRs if rapidly declining star formation histories are included in the explored parameter space.

The effect of geothermal fluid composition in lime-pozzolan reactions on elastic and transport properties.

NASA Astrophysics Data System (ADS)

MacFarlane, J.; Vanorio, T.

2016-12-01

Calcium-Silicate-Hydrates (C-S-H) are a complex family of hydrates known to form within hyper-alkaline geothermal systems as well as concrete. Within both environments the formation of C-S-H can be linked to the lime-pozzolan reaction. Pozzolan's defined as a siliceous or alumino-siliceous material, which in itself possesses little or no cementing property, but in the presence of moisture chemically reacts with calcium hydroxide at ordinary temperatures to form cementitious compounds. C-S-H fibers have been discovered in a low permeability, caprock layer beneath the Campi Flegrei caldera, as well as within ancient Roman concrete made using volcanic ash and fluids from the Campi Flegrei region over 2000 years ago. By replicating the recipe for Roman concrete, fibrous minerals have been formed in laboratory experiments and imaged using a scanning electron microscope. The formation of C-S-H within concrete has been shown to depend on the mineral ions present, among other factors. Here, we report on how the geothermal fluid composition effects the elastic and transport properties of laboratory samples. Samples were made using the same volcanic ash as the Romans, called Pozzolana, slaked lime and geothermal fluid. Two geothermal fluids from the Campi Flegrei region were compared, as well as deionized water as a control. Preliminary results have shown changes in both the elastic and transport properties between sample sets made with geothermal fluid and the control. These changes are attributed to the structure of the C-S-H that forms in the lime-pozzolan reaction. Understanding how the geothermal fluid composition controls the properties of this reaction has implications for the understanding of both geothermal systems and concrete engineering.

High voltage semiconductor devices and methods of making the devices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matocha, Kevin; Chatty, Kiran; Banerjee, Sujit

A multi-cell MOSFET device including a MOSFET cell with an integrated Schottky diode is provided. The MOSFET includes n-type source regions formed in p-type well regions which are formed in an n-type drift layer. A p-type body contact region is formed on the periphery of the MOSFET. The source metallization of the device forms a Schottky contact with an n-type semiconductor region adjacent the p-type body contact region of the device. Vias can be formed through a dielectric material covering the source ohmic contacts and/or Schottky region of the device and the source metallization can be formed in the vias.more » The n-type semiconductor region forming the Schottky contact and/or the n-type source regions can be a single continuous region or a plurality of discontinuous regions alternating with discontinuous p-type body contact regions. The device can be a SiC device. Methods of making the device are also provided.« less

High voltage semiconductor devices and methods of making the devices

DOEpatents

Matocha, Kevin; Chatty, Kiran; Banerjee, Sujit

2017-02-28

A multi-cell MOSFET device including a MOSFET cell with an integrated Schottky diode is provided. The MOSFET includes n-type source regions formed in p-type well regions which are formed in an n-type drift layer. A p-type body contact region is formed on the periphery of the MOSFET. The source metallization of the device forms a Schottky contact with an n-type semiconductor region adjacent the p-type body contact region of the device. Vias can be formed through a dielectric material covering the source ohmic contacts and/or Schottky region of the device and the source metallization can be formed in the vias. The n-type semiconductor region forming the Schottky contact and/or the n-type source regions can be a single continuous region or a plurality of discontinuous regions alternating with discontinuous p-type body contact regions. The device can be a SiC device. Methods of making the device are also provided.

Resting-state functional connectivity indexes reading competence in children and adults.

PubMed

Koyama, Maki S; Di Martino, Adriana; Zuo, Xi-Nian; Kelly, Clare; Mennes, Maarten; Jutagir, Devika R; Castellanos, F Xavier; Milham, Michael P

2011-06-08

Task-based neuroimaging studies face the challenge of developing tasks capable of equivalently probing reading networks across different age groups. Resting-state fMRI, which requires no specific task, circumvents these difficulties. Here, in 25 children (8-14 years) and 25 adults (21-46 years), we examined the extent to which individual differences in reading competence can be related to resting-state functional connectivity (RSFC) of regions implicated in reading. In both age groups, reading standard scores correlated positively with RSFC between the left precentral gyrus and other motor regions, and between Broca's and Wernicke's areas. This suggests that, regardless of age group, stronger coupling among motor regions, as well as between language/speech regions, subserves better reading, presumably reflecting automatized articulation. We also observed divergent RSFC-behavior relationships in children and adults, particularly those anchored in the left fusiform gyrus (FFG) (the visual word form area). In adults, but not children, better reading performance was associated with stronger positive correlations between FFG and phonology-related regions (Broca's area and the left inferior parietal lobule), and with stronger negative relationships between FFG and regions of the "task-negative" default network. These results suggest that both positive RSFC (functional coupling) between reading regions and negative RSFC (functional segregation) between a reading region and default network regions are important for automatized reading, characteristic of adult readers. Together, our task-independent RSFC findings highlight the importance of appreciating developmental changes in the neural correlates of reading competence, and suggest that RSFC may serve to facilitate the identification of reading disorders in different age groups.

Magma Reservoirs Feeding Giant Radiating Dike Swarms: Insights from Venus

NASA Technical Reports Server (NTRS)

Grosfils, E. B.; Ernst, R. E.

2003-01-01

Evidence of lateral dike propagation from shallow magma reservoirs is quite common on the terrestrial planets, and examination of the giant radiating dike swarm population on Venus continues to provide new insight into the way these complex magmatic systems form and evolve. For example, it is becoming clear that many swarms are an amalgamation of multiple discrete phases of dike intrusion. This is not surprising in and of itself, as on Earth there is clear evidence that formation of both magma reservoirs and individual giant radiating dikes often involves periodic magma injection. Similarly, giant radiating swarms on Earth can contain temporally discrete subswarms defined on the basis of geometry, crosscutting relationships, and geochemical or paleomagnetic signatures. The Venus data are important, however, because erosion, sedimentation, plate tectonic disruption, etc. on Earth have destroyed most giant radiating dike swarm's source regions, and thus we remain uncertain about the geometry and temporal evolution of the magma sources from which the dikes are fed. Are the reservoirs which feed the dikes large or small, and what are the implications for how the dikes themselves form? Does each subswarm originate from a single, periodically reactivated reservoir, or do subswarms emerge from multiple discrete geographic foci? If the latter, are these discrete foci located at the margins of a single large magma body, or do multiple smaller reservoirs define the character of the magmatic center as a whole? Similarly, does the locus of magmatic activity change with time, or are all the foci active simultaneously? Careful study of giant radiating dike swarms on Venus is yielding the data necessary to address these questions and constrain future modeling efforts. Here, using giant radiating dike swarms from the Nemesis Tessera (V14) and Carson (V43) quadrangles as examples, we illustrate some of the dike swarm focal region diversity observed on Venus and briefly explore some key implications for the questions framed above.

Global Perspectives on Cancer Health Disparities: Impact, Utility, and Implications for Cancer Nursing

PubMed Central

So, Winnie K. W.; Chan, Raymond Javan; Truant, Tracy; Trevatt, Paul; Bialous, Stella Aguinaga; Barton-Burke, Margaret

2016-01-01

This paper examines cancer health disparities and contributing factors at national, regional, and international levels. The authors all live in different countries and regions with different health-care systems and practices. Despite the shared cancer nursing perspective, each country or global region approaches cancer disparities differently. With globalization the world is becoming smaller, and in turn becoming interconnected and interdependent. This article focuses on cancer health disparities and global cancer nursing, exemplifying these concepts about the impact and implications of person-centered care. PMID:28083548

The microglial fractalkine receptor is not required for activity-dependent plasticity in the mouse visual system.

PubMed

Lowery, Rebecca L; Tremblay, Marie-Eve; Hopkins, Brittany E; Majewska, Ania K

2017-11-01

Microglia have recently been implicated as key regulators of activity-dependent plasticity, where they contribute to the removal of inappropriate or excess synapses. However, the molecular mechanisms that mediate this microglial function are still not well understood. Although multiple studies have implicated fractalkine signaling as a mediator of microglia-neuron communications during synaptic plasticity, it is unclear whether this is a universal signaling mechanism or whether its role is limited to specific brain regions and stages of the lifespan. Here, we examined whether fractalkine signaling mediates microglial contributions to activity-dependent plasticity in the developing and adolescent visual system. Using genetic ablation of fractalkine's cognate receptor, CX 3 CR1, and both ex vivo characterization and in vivo imaging in mice, we examined whether fractalkine signaling is required for microglial dynamics and modulation of synapses, as well as activity-dependent plasticity in the visual system. We did not find a role for fractalkine signaling in mediating microglial properties during visual plasticity. Ablation of CX 3 CR1 had no effect on microglial density, distribution, morphology, or motility, in either adolescent or young adult mice across brain regions that include the visual cortex. Ablation of CX 3 CR1 also had no effect on baseline synaptic turnover or contact dynamics between microglia and neurons. Finally, we found that fractalkine signaling is not required for either early or late forms of activity-dependent visual system plasticity. These findings suggest that fractalkine is not a universal regulator of synaptic plasticity, but rather has heterogeneous roles in specific brain regions and life stages. © 2017 Wiley Periodicals, Inc.

History of plains resurfacing in the Scandia region of Mars

USGS Publications Warehouse

Tanaka, Kenneth L.; Fortezzo, Corey M.; Hayward, Rosalyn K.; Rodriguez, J. Alexis P.; Skinner, James A.

2011-01-01

We present a preliminary photogeologic map of the Scandia region of Mars with the objective of reconstructing its resurfacing history. The Scandia region includes the lower section of the regional lowland slope of Vastitas Borealis extending about 500–1800 km away from Alba Mons into the Scandia sub-basin below −4800 m elevation. Twenty mapped geologic units express the diverse stratigraphy of the region. We particularly focus on the materials making up the Vastitas Borealis plains and its Scandia sub-region, where erosional processes have obscured stratigraphic relations and made the reconstruction of the resurfacing history particularly challenging. Geologic mapping implicates the deposition, erosion, and deformation/degradation of geologic units predominantly during Late Hesperian and Early Amazonian time (~3.6–3.3 Ga). During this time, Alba Mons was active, outflow channels were debouching sediments into the northern plains, and basal ice layers of the north polar plateau were accumulating. We identify zones of regional tectonic contraction and extension as well as gradation and mantling. Depressions and scarps within these zones indicate collapse and gradation of Scandia outcrops and surfaces at scales of meters to hundreds of meters. We find that Scandia Tholi display concentric ridges, rugged peaks, irregular depressions, and moats that suggest uplift and tilting of layered plains material by diapirs and extrusion, erosion, and deflation of viscous, sedimentary slurries as previously suggested. These appear to be long-lived features that both pre-date and post-date impact craters. Mesa-forming features may have similar origins and occur along the southern margin of the Scandia region, including near the Phoenix Mars Lander site. Distinctive lobate materials associated with local impact craters suggest impact-induced mobilization of surface materials. We suggest that the formation of the Scandia region features potentially resulted from crustal heating related to Alba Mons volcanism, which acted upon a sequence of lavas, outflow channel sediments, and polar ice deposits centered within the Scandia region. These volatile-enriched sediments may have been in a state of partial volatile melt, resulting in the mobilization of deeply buried ancient materials and their ascent and emergence as sediment and mud breccia diapirs to form tholi features. Similar subsurface instabilities proximal to Alba Mons may have led to surface disruption, as suggested by local and regional scarps, mesas, moats, and knob fields.

Gemini Spectroscopic Survey of Young Intermediate-Mass Star-Forming Regions

NASA Astrophysics Data System (ADS)

Lundquist, Michael; Kobulnicky, Henry

2018-01-01

The majority of stars form in embedded clusters. Current research into star formation has focused on either high-mass star-forming regions or low-mass star-forming regions. We present the results from a Gemini spectroscopic survey of young intermediate-mass star-forming regions. These are star forming regions selected to produce stars up to but not exceeding 8 solar masses. We obtained spectra of these regions with GNIRS on Gemini North and Flamingos-2 on Gemini South. We also combine this with near-infrared imaging from 2MASS, UKIDSS, and VVV to study the stellar content.

A regional interdependence model of musculoskeletal dysfunction: research, mechanisms, and clinical implications

PubMed Central

Sueki, Derrick G; Cleland, Joshua A; Wainner, Robert S

2013-01-01

The term ‘regional interdependence’ or RI has recently been introduced into the vernacular of physical therapy and rehabilitation literature as a clinical model of musculoskeletal assessment and intervention. The underlying premise of this model is that seemingly unrelated impairments in remote anatomical regions of the body may contribute to and be associated with a patient’s primary report of symptoms. The clinical implication of this premise is that interventions directed at one region of the body will often have effects at remote and seeming unrelated areas. The formalized concept of RI is relatively new and was originally derived in an inductive manner from a variety of earlier publications and clinical observations. However, recent literature has provided additional support to the concept. The primary purpose of this article will be to further refine the operational definition for the concept of RI, examine supporting literature, discuss possible clinically relevant mechanisms, and conclude with a discussion of the implications of these findings on clinical practice and research. PMID:24421619

Copper attachment to prion protein at a non-octarepeat site

NASA Astrophysics Data System (ADS)

Hodak, Miroslav; Bernholc, Jerry

2011-03-01

Prion protein (PrP) plays a causative role in a group of neurodegenerative diseases, which include ``mad cow disease'' or its human form variant Creutzfeld-Jacob disease. Normal function of PrP remains unknown, but it is now well established that PrP can efficiently bind copper ions and this ability has been linked to its function. The primary binding sites are located in the so-called octarepeat region located between residues 60-91. While these are by now well characterized, the sites located outside these region remain mostly undetermined. In this work, we investigate the properties of Cu binding site located at His 111 using recently developed hybrid Kohn-Sham/orbital-free density functional simulations. Experimental data indicate that copper is coordinated by either four nitrogens or three nitrogens and one oxygen. We investigate both possibilities, comparing their energetics and attachment geometries. Similarities and differences with other binding sites and implications for PrP function will also be discussed.

Spatial distribution of dinoflagellates from the tropical coastal waters of the South Andaman, India: Implications for coastal pollution monitoring.

PubMed

Narale, Dhiraj Dhondiram; Anil, Arga Chandrashekar

2017-02-15

Dinoflagellate community structure from two semi-enclosed areas along the South Andaman region, India, was investigated to assess the anthropogenic impact on coastal water quality. At the densely inhabited Port Blair Bay, the dominance of mixotrophs in water and Protoperidinoids in sediments was attributed to anthropogenic nutrient enrichment and prey availability. A significant decrease in dinoflagellate abundance from inner to outer bay emphasize the variation in nutrient availability. The dominance of autotrophs and Gonyaulacoid cysts at the North Bay highlight low nutrient conditions with less anthropogenic pressure. The occurrence of oceanic Ornithocercus steinii and Diplopsalis sp. could evince the oceanic water intrusion into the North Bay. Nine potentially harmful and red-tide-forming species including Alexandrium tamarense complex, A. minutum were identified in this study. Although there are no harmful algal bloom (HABs) incidences in this region so far, increasing coastal pollution could support their candidature towards the future HABs initiation and development. Copyright © 2016 Elsevier Ltd. All rights reserved.

Geophysical Data (Gravity and Magnetic) from the Area Between Adana, Kahramanmaras and Hatay in the Eastern Mediterranean Region: Tectonic Implications

NASA Astrophysics Data System (ADS)

Over, Semir; Akin, Ugur; Sen, Rahime

2018-01-01

The gravity and magnetic maps of the area between Adana-Kahramanmaras-Hatay provinces were produced from a compilation of data gathered during the period between 1973 and 1989. Reduced to the pole (RTP) and pseudo-gravity transformation (PGT) methods were applied to the magnetic data, while derivative ratio (DR) processing was applied to both gravity and magnetic data, respectively. Bouguer, RTP and PGT maps show the image of a buried structure corresponding to ophiolites under undifferentiated Quaternary deposits in the Adana depression and Iskenderun Gulf. DR maps show two important faults which reflect the tectonic framework in the study area: (1) the Karatas-Osmaniye Fault extending from Osmaniye to Karatas in the south between Adana and Iskenderun depressions and (2) Amanos Fault (southern part of East Anatolian Fault) in the Hatay region running southward from Turkoglu to Amik Basin along Amanos Mountain forming the actual plate boundary between the Anatolian block (part of Eurasian plate) and Arabian plate.

Identification of hydrophobic amino acids required for lipid activation of C. elegans CTP:phosphocholine cytidylyltransferase.

PubMed

Braker, Jay D; Hodel, Kevin J; Mullins, David R; Friesen, Jon A

2009-12-01

CTP:phosphocholine cytidylyltransferase (CCT), critical for phosphatidylcholine biosynthesis, is activated by translocation to the membrane surface. The lipid activation region of Caenorhabditis elegans CCT is between residues 246 and 266 of the 347 amino acid polypeptide, a region proposed to form an amphipathic alpha helix. When leucine 246, tryptophan 249, isoleucine 256, isoleucine 257, or phenylalanine 260, on the hydrophobic face of the helix, were changed individually to serine low activity was observed in the absence of lipid vesicles, similar to wild-type CCT, while lipid stimulated activity was reduced compared to wild-type CCT. Mutational analysis of phenylalanine 260 implicated this residue as a contributor to auto-inhibition of CCT while mutation of L246, W249, I256, and I257 simultaneously to serine resulted in significantly higher activity in the absence of lipid vesicles and an enzyme that was not lipid activated. These results support a concerted mechanism of lipid activation that requires multiple residues on the hydrophobic face of the putative amphipathic alpha helix.

Local Dkk1 Crosstalk from Breeding Ornaments Impedes Regeneration of Injured Male Zebrafish Fins

PubMed Central

Kang, Junsu; Nachtrab, Gregory; Poss, Kenneth D.

2013-01-01

SUMMARY Precise spatiotemporal regulation of signaling activators and inhibitors can help limit developmental crosstalk between neighboring tissues during morphogenesis, homeostasis, and regeneration. Here, we find that the secreted Wnt inhibitor Dkk1b is abundantly produced by dense regions of androgen-regulated epidermal tubercles (ET) on the surfaces of adult male zebrafish pectoral fins. High-speed videos and amputation experiments reveal that pectoral fins and their ET are employed for male spawning. Formation and vigorous turnover of ET involve Dkk1b induction and maintenance, whereas Dkk1b is typically restricted from the regeneration blastema after amputation injury. When amputation occurs through an ET-containing region, a Dkk1b-enriched wound epidermis forms and blastema formation is disrupted, compromising regeneration. Thus, homeostatic signaling by key breeding ornaments can interfere with injury-activated tissue regeneration. Our findings help explain sexually dimorphic fin regeneration in zebrafish, and have implications for how regenerative potential might decline as development progresses or during species evolution. PMID:24135229

ELAV Links Paused Pol II to Alternative Polyadenylation in the Drosophila Nervous System

PubMed Central

Oktaba, Katarzyna; Zhang, Wei; Lotz, Thea Sabrina; Jun, David Jayhyun; Lemke, Sandra Beatrice; Ng, Samuel Pak; Esposito, Emilia; Levine, Michael; Hilgers, Valérie

2014-01-01

SUMMARY Alternative polyadenylation (APA) has been implicated in a variety of developmental and disease processes. A particularly dramatic form of APA occurs in the developing nervous system of flies and mammals, whereby various developmental genes undergo coordinate 3′ UTR extension. In Drosophila, the RNA-binding protein ELAV inhibits RNA processing at proximal polyadenylation sites, thereby fostering the formation of exceptionally long 3′ UTRs. Here, we present evidence that paused Pol II promotes recruitment of ELAV to extended genes. Replacing promoters of extended genes with heterologous promoters blocks normal 3′ extension in the nervous system, while extension-associated promoters can induce 3′ extension in ectopic tissues expressing ELAV. Computational analyses suggest that promoter regions of extended genes tend to contain paused Pol II and associated cis-regulatory elements such as GAGA. ChIP-Seq assays identify ELAV in the promoter regions of extended genes. Our study provides evidence for a regulatory link between promoter-proximal pausing and APA. PMID:25544561

Global Migration Dynamics Underlie Evolution and Persistence of Human Influenza A (H3N2)

PubMed Central

Bedford, Trevor; Cobey, Sarah; Beerli, Peter; Pascual, Mercedes

2010-01-01

The global migration patterns of influenza viruses have profound implications for the evolutionary and epidemiological dynamics of the disease. We developed a novel approach to reconstruct the genetic history of human influenza A (H3N2) collected worldwide over 1998 to 2009 and used it to infer the global network of influenza transmission. Consistent with previous models, we find that China and Southeast Asia lie at the center of this global network. However, we also find that strains of influenza circulate outside of Asia for multiple seasons, persisting through dynamic migration between northern and southern regions. The USA acts as the primary hub of temperate transmission and, together with China and Southeast Asia, forms the trunk of influenza's evolutionary tree. These findings suggest that antiviral use outside of China and Southeast Asia may lead to the evolution of long-term local and potentially global antiviral resistance. Our results might also aid the design of surveillance efforts and of vaccines better tailored to different geographic regions. PMID:20523898

Ultra Light Axionic Dark Matter: Galactic Halos and Implications for Observations with Pulsar Timing Arrays

NASA Astrophysics Data System (ADS)

de Martino, Ivan; Broadhurst, Tom; Tye, S.-H. Henry; Chiueh, Tzihong; Shive, Hsi-Yu; Lazkoz, Ruth

2018-01-01

The cold dark matter (CDM) paradigm successfully explains the cosmic structure over an enormous span of redshifts. However, it fails when probing the innermost regions of dark matter halos and the properties of the Milky Way's dwarf galaxy satellites. Moreover, the lack of experimental detection of Weakly Interacting Massive Particle (WIMP) favors alternative candidates such as light axionic dark matter that naturally arise in string theory. Cosmological N-body simulations have shown that axionic dark matter forms a solitonic core of size of ≃ 150 pc in the innermost region of the galactic halos. The oscillating scalar field associated to the axionic dark matter halo produces an oscillating gravitational potential that induces a time dilation of the pulse arrival time of ≃ 400 ns/(m_B/10^{-22} eV) for pulsar within such a solitonic core. Over the whole galaxy, the averaged predicted signal may be detectable with current and forthcoming pulsar timing array telescopes.

Deep Structure of Northern Apennines Subduction Orogen (Italy) as Revealed by a Joint Interpretation of Passive and Active Seismic Data

NASA Astrophysics Data System (ADS)

Piana Agostinetti, Nicola; Faccenna, Claudio

2018-05-01

The Apennines is a well-studied orogeny formed by the accretion of continental slivers during the subduction of the Adriatic plate, but its deep structure is still a topic of controversy. Here we illuminated the deep structure of the Northern Apennines belt by combining results from the analysis of active seismic (CROP03) and receiver function data. The result from combining these two approaches provides a new robust view of the structure of the deep crust/upper mantle, from the back-arc region to the Adriatic subduction zone. Our analysis confirms the shallow Moho depth beneath the back-arc region and defines the top of the downgoing plate, showing that the two plates separate at depth about 40 km closer to the trench than reported in previous reconstructions. This spatial relationship has profound implications for the geometry of the shallow subduction zone and of the mantle wedge, by the amount of crustal material consumed at trench.

Complete abolition of reading and writing ability with a third ventricle colloid cyst: implications for surgical intervention and proposed neural substrates of visual recognition and visual imaging ability.

PubMed

Barker, Lynne Ann; Morton, Nicholas; Romanowski, Charles A J; Gosden, Kevin

2013-10-24

We report a rare case of a patient unable to read (alexic) and write (agraphic) after a mild head injury. He had preserved speech and comprehension, could spell aloud, identify words spelt aloud and copy letter features. He was unable to visualise letters but showed no problems with digits. Neuropsychological testing revealed general visual memory, processing speed and imaging deficits. Imaging data revealed an 8 mm colloid cyst of the third ventricle that splayed the fornix. Little is known about functions mediated by fornical connectivity, but this region is thought to contribute to memory recall. Other regions thought to mediate letter recognition and letter imagery, visual word form area and visual pathways were intact. We remediated reading and writing by multimodal letter retraining. The study raises issues about the neural substrates of reading, role of fornical tracts to selective memory in the absence of other pathology, and effective remediation strategies for selective functional deficits.

Double-gap Alfvén eigenmodes: revisiting eigenmode interaction with the alfvén continuum.

PubMed

Gorelenkov, N N

2005-12-31

A new type of global shear Alfvén eigenmode is found in tokamak plasmas where the mode localization is in the region intersecting the Alfvén continuum. The eigenmode is formed by the coupling of two solutions from two adjacent gaps (akin to potential wells) in the shear Alfvén continuum. For tokamak plasmas with reversed magnetic shear, it is shown that the toroidicity-induced solution tunnels through the continuum to match the ellipticity-induced Alfvén eigenmode so that the resulting solution is continuous at the point of resonance with the continuum. The existence of these double-gap Alfvén eigenmodes allows for potentially new ways of coupling edge fields to the plasma core in conditions where the core region is conventionally considered inaccessible. Implications include new approaches to heating and current drive in fusion plasmas as well as its possible use as a core diagnostic in burning plasmas.

Experiments and Spectral Studies of Martian Volcanic Rocks: Implications for the Origin of Pathfinder Rocks and Soils

NASA Technical Reports Server (NTRS)

Rutherford, Malcolm J.; Mustard, Jack; Weitz, Catherine

2002-01-01

The composition and spectral properties of the Mars Pathfinder rocks and soils together with the identification of basaltic and andesitic Mars terrains based on Thermal Emission Spectrometer (TES) data raised interesting questions regarding the nature and origin of Mars surface rocks. We have investigated the following questions: (1) are the Pathfinder rocks igneous and is it possible these rocks could have formed by known igneous processes, such as equilibrium or fractional crystallization, operating within SNC magmas known to exist on Mars? If it is possible, what P (depth) and PH2O conditions are required? (2) whether TES-based interpretations of plagioclase-rich basalt and andesitic terrains in the south and north regions of Mars respectively are unique. Are the surface compositions of these regions plagioclase-rich, possibly indicating the presence of old AI-rich crust of Mars, or are the spectra being affected by something like surface weathering processes that might determine the spectral pyroxene to plagioclase ratio?

The Atmospheric Dynamics of Alpha Tau (K5 III) -- Clues to Understanding the Magnetic Dynamo

NASA Technical Reports Server (NTRS)

Carpenter Kenneth G.

2008-01-01

Using HST/GHRS, HST/STIS and FUSE archival data for (alpha) Tau and the CHIANTI spectroscopic code, we have derived line shifts, volumetric emission measures, and plasma density estimates, and calculated filling factors for a number of UV lines forming between 10,000 K and 300,000 K in the outer atmosphere of this red giant star. The data suggest the presence of low-temperature extended regions and high-temperature compact regions, associated with magnetically open and closed structures in the stellar atmosphere, respectively. The signatures of UV lines from Alpha Tau can be consistently understood via a model of upward-traveling Alfven waves in a gravitationally stratified atmosphere. These wakes cause non-thermal broadening in UV lines due to unresolved wave motions and downward plasma motions in compact magnetic loops heated by resonant .4lf\\en wave heating. We discuss implications of this interpretation for understanding the nature of magnetic dynamos operating in late-type giants.

Producing custom regional climate data sets for impact assessment with xarray

NASA Astrophysics Data System (ADS)

Simcock, J. G.; Delgado, M.; Greenstone, M.; Hsiang, S. M.; Kopp, R. E.; Carleton, T.; Hultgren, A.; Jina, A.; Nath, I.; Rising, J. A.; Rode, A.; Yuan, J.; Chong, T.; Dobbels, G.; Hussain, A.; Song, Y.; Wang, J.; Mohan, S.; Larsen, K.; Houser, T.

2017-12-01

Research in the field of climate impact assessment and valuation frequently requires the pairing of economic observations with historical or projected weather variables. Impact assessments with large geographic scope or spatially aggregated data frequently require climate variables to be prepared for use with administrative/political regions, economic districts such as utility service areas, physical regions such as watersheds, or other larger, non-gridded shapes. Approaches to preparing such data in the literature vary from methods developed out of convenience to more complex measures intended to account for spatial heterogeneity. But more sophisticated methods are difficult to implement, from both a theoretical and a technical standpoint. We present a new python package designed to assist researchers in the preparation of historical and projected climate data for arbitrary spatial definitions. Users specify transformations by providing (a) sets of regions in the form of shapefiles, (b) gridded data to be transformed, and, optionally, (c) gridded weights to use in the transformation. By default, aggregation to regions is conducted such that the resulting regional data draws from each grid cell according to the cell's share of total region area. However, researchers can provide alternative weighting schemes, such that the regional data is weighted by, for example, the population or planted agricultural area within each cell. An advantage of this method is that it enables easy preparation of nonlinear transformations of the climate data before aggregation to regions, allowing aggregated variables to more accurately capture the spatial heterogeneity within a region in the transformed data. At this session, we will allow attendees to view transformed climate projections, examining the effect of various weighting schemes and nonlinear transformations on aggregate regional values, highlighting the implications for climate impact assessment work.

The Origin of the Excess Near-Infrared Diffuse Sky Brightness: Population III Stars or Zodiacal Light?

NASA Technical Reports Server (NTRS)

Dwek, Eli

2006-01-01

The intensity of the diffuse 1 to 5 micron sky emission from which solar system and Galactic foregrounds have been subtracted is in excess of that expected from energy released by galaxies and stars that formed during the z < 5 redshift interval. The spectral signature of this excess near-infrared background light (NIRBL) component is almost identical to that of reflected sunlight from the interplanetary dust cloud, and could therefore be the result of the incomplete subtraction of this foreground emission component from the diffuse sky maps. Alternatively, this emission component could be extragalactic. Its spectral signature is consistent with that of redshifted continuum and recombination line emission from H-II regions formed by the first generation of very massive stars. In this talk I will present the implications of this excess emission for our understanding of the zodiacal dust cloud, the formation rate of Pop III stars, and the TeV gamma-ray opacity to nearby blazars.

Meteor wake in high frame-rate images--implications for the chemistry of ablated organic compounds

NASA Technical Reports Server (NTRS)

Jenniskens, Peter; Stenbaek-Nielsen, Hans C.

2004-01-01

Extraterrestrial organic matter may have been chemically altered into forms more ameanable for prebiotic chemistry in the wake of a meteor after ablation. We measured the rate of cooling of the plasma in the meteor wake from the intensity decay just behind a meteoroid by freezing its motion in high frame-rate 1000 frames/s video images, with an intensified camera that has a short phosphor decay time. Though the resulting cooling rate was found to be lower than theoretically predicted, our calculations indicated that there would have been insufficient collisions to break apart large organic compounds before most reactive radicals and electrons were lost from the air plasma. Organic molecules delivered from space to the early Earth via meteors might therefore have survived in a chemically altered form. In addition, we discovered that relatively small meteoroids generated far-ultraviolet emission that is absorbed in the immediate environment of the meteoroid, which may chemically alter the atmosphere over a much larger region than previously recognized.

X-ray insights into star and planet formation.

PubMed

Feigelson, Eric D

2010-04-20

Although stars and planets form in cold environments, X-rays are produced in abundance by young stars. This review examines the implications of stellar X-rays for star and planet formation studies, highlighting the contributions of NASA's (National Aeronautics and Space Administration) Chandra X-ray Observatory. Seven topics are covered: X-rays from protostellar outflow shocks, X-rays from the youngest protostars, the stellar initial mass function, the structure of young stellar clusters, the fate of massive stellar winds, X-ray irradiation of protoplanetary disks, and X-ray flare effects on ancient meteorites. Chandra observations of star-forming regions often show dramatic star clusters, powerful magnetic reconnection flares, and parsec-scale diffuse plasma. X-ray selected samples of premain sequence stars significantly advance studies of star cluster formation, the stellar initial mass function, triggered star-formation processes, and protoplanetary disk evolution. Although X-rays themselves may not play a critical role in the physics of star formation, they likely have important effects on protoplanetary disks by heating and ionizing disk gases.

[New business model for medical specialists].

PubMed

Houwen, L G H J Louis

2013-01-01

The reforms in the field of medical specialist care have important implications for the professional practice of medical specialists and their working relationship with the hospital. This leads to a considerable amount of pressure placed upon the way physicians have traditionally practiced their liberal professions, which is by forming partnerships and practicing from within the hospitals based on an admission agreement. As of 2015, the tax benefits for entrepreneurs will be abolished and the formation of regional partnerships will be discouraged. These developments not only pose threats but also offer opportunities for both the entrepreneurial medical specialist and the innovative hospital. In this article, the prospect of a future business model for specialist medical care will be outlined and explored by proposing three new organizational forms. The central vision of this model is that physicians who wish to retain their status of liberal professional practitioners in the twenty-first century should be more involved in the ownership structure of hospitals. The social importance of responsible patient care remains paramount.

Trimeric Structure of (+)-Pinoresinol-forming Dirigent Protein at 1.95 Å Resolution with Three Isolated Active Sites

DOE PAGES

Kim, Kye-Won; Smith, Clyde A.; Daily, Michael D.; ...

2014-11-19

Control over phenoxy radical-radical coupling reactions in vivo in vascular plants was enigmatic until our discovery of dirigent proteins (DPs, from the Latin dirigere, to guide or align). The first three-dimensional structure of a DP ((+)-pinoresinol-forming DP, 1.95 Å resolution, rhombohedral space group H32)) is reported herein. It has a tightly packed trimeric structure with an eight-stranded β-barrel topology for each DP monomer. Each putative substrate binding and orientation coupling site is located on the trimer surface but too far apart for intermolecular coupling between sites. It is proposed that each site enables stereoselective coupling (using either two coniferyl alcoholmore » radicals or a radical and a monolignol). Interestingly, there are six differentially conserved residues in DPs affording either the (+)- or (₋)-antipodes in the vicinity of the putative binding site and region known to control stereoselectivity. We find DPs are involved in lignan biosynthesis, whereas dirigent domains/sites have been implicated in lignin deposition.« less

A case study of cumulus formation beneath a stratocumulus sheet: Its structure and effect on boundary layer budgets

NASA Technical Reports Server (NTRS)

Barlow, Roy W.; Nicholls, S.

1990-01-01

On several occasions during the FIRE Marine Stratocumulus IFO off the California coast, small cumulus were observed to form during the morning beneath the main stratocumulus (Sc) deck. This occurs in the type of situation described by Turton and Nicholls (1987) in which there is insufficient generation of turbulent kinetic energy (TKE) from the cloudtop or the surface to sustain mixing throughout the layer, and a separation of the surface and cloud layers occurs. The build up of humidity in the surface layer allows cumuli to form, and the more energetic of these may penetrate back into the Sc deck, reconnecting the layers. The results presented were collected by the UKMO C-130 aircraft flying in a region where these small cumulus had grown to the extent that they had penetrated into the main Sc deck above. The structure of these penetrative cumulus are examined and their implications on the layer flux and radiation budget discussed.

X-ray insights into star and planet formation

PubMed Central

Feigelson, Eric D.

2010-01-01

Although stars and planets form in cold environments, X-rays are produced in abundance by young stars. This review examines the implications of stellar X-rays for star and planet formation studies, highlighting the contributions of NASA’s (National Aeronautics and Space Administration) Chandra X-ray Observatory. Seven topics are covered: X-rays from protostellar outflow shocks, X-rays from the youngest protostars, the stellar initial mass function, the structure of young stellar clusters, the fate of massive stellar winds, X-ray irradiation of protoplanetary disks, and X-ray flare effects on ancient meteorites. Chandra observations of star-forming regions often show dramatic star clusters, powerful magnetic reconnection flares, and parsec-scale diffuse plasma. X-ray selected samples of premain sequence stars significantly advance studies of star cluster formation, the stellar initial mass function, triggered star-formation processes, and protoplanetary disk evolution. Although X-rays themselves may not play a critical role in the physics of star formation, they likely have important effects on protoplanetary disks by heating and ionizing disk gases. PMID:20404197

What controls the mass transport by mode-2 internal solitary-like waves?

NASA Astrophysics Data System (ADS)

Deepwell, David; Stastna, Marek

2016-04-01

Horizontally propagating internal waves are a regular occurrence in the coastal ocean. Their most commonly observed vertical structure is mode-1 in which isopycnals rise and fall in concert at all depths. Second mode waves, where isopycnals expand from and contract toward the pycnocline centre, have been found in recent observations to occur more frequently than previously thought. For the more common convex configuration, these waves mix the pycnocline, and under certain conditions form recirculating cores which efficiently transport material. In the laboratory, mode-2 waves are easily formed by releasing a mixed region into an ambient stratification. Using high resolution, three dimensional, direct numerical simulations of a laboratory configuration we describe the mass transport efficiency of mode-2 waves under a variety of different parameter regimes and initializations. We identify pycnocline configurations for which transport is especially efficient, and explore the structure of recirculating cores during their formation, propagation and disintegration and its implications on mass transport.

Tertiary basin development and tectonic implications, Whipple detachment system, Colorado River extensional corridor, California and Arizona

NASA Technical Reports Server (NTRS)

Nielson, J. E.; Beratan, K. K.

1990-01-01

This paper reports on geologic mapping, stratigraphic and structural observations, and radiometric dating of Miocene deposits of the Whipple detachment system, Colorado River extensional corridor of California and Arizona. From these data, four regions are distinguished in the study area that correspond to four Miocene depositional basins. It is shown that these basins developed in about the same positions, relative to each other and to volcanic sources, as they occupy at present. They formed in the early Miocene from a segmentation of the upper crust into blocks bounded by high-angle faults that trended both parallel and perpendicular to the direction of extension and which were terminated at middle crustal depths by a low-angle detachment fault.

Effects of Replication and Transcription on DNA Structure-Related Genetic Instability.

PubMed

Wang, Guliang; Vasquez, Karen M

2017-01-05

Many repetitive sequences in the human genome can adopt conformations that differ from the canonical B-DNA double helix (i.e., non-B DNA), and can impact important biological processes such as DNA replication, transcription, recombination, telomere maintenance, viral integration, transposome activation, DNA damage and repair. Thus, non-B DNA-forming sequences have been implicated in genetic instability and disease development. In this article, we discuss the interactions of non-B DNA with the replication and/or transcription machinery, particularly in disease states (e.g., tumors) that can lead to an abnormal cellular environment, and how such interactions may alter DNA replication and transcription, leading to potential conflicts at non-B DNA regions, and eventually result in genetic stability and human disease.

Effects of Replication and Transcription on DNA Structure-Related Genetic Instability

PubMed Central

Wang, Guliang; Vasquez, Karen M.

2017-01-01

Many repetitive sequences in the human genome can adopt conformations that differ from the canonical B-DNA double helix (i.e., non-B DNA), and can impact important biological processes such as DNA replication, transcription, recombination, telomere maintenance, viral integration, transposome activation, DNA damage and repair. Thus, non-B DNA-forming sequences have been implicated in genetic instability and disease development. In this article, we discuss the interactions of non-B DNA with the replication and/or transcription machinery, particularly in disease states (e.g., tumors) that can lead to an abnormal cellular environment, and how such interactions may alter DNA replication and transcription, leading to potential conflicts at non-B DNA regions, and eventually result in genetic stability and human disease. PMID:28067787

The Integrative Self: How Self-Reference Integrates Perception and Memory.

PubMed

Sui, Jie; Humphreys, Glyn W

2015-12-01

We propose a new account of how self-reference affects information processing. We report evidence that self-reference affects the binding of memory to source, the integration of parts into perceptual wholes, and the ability to switch from a prior association to new associations. Self-reference also influences the integration of different stages of processing, linking attention to decision making, and affects the coupling between brain regions mediating self-representation and attention to the environment. Taken together, the data suggest that self-reference acts as a form of 'integrative glue' which can either enhance or disrupt performance, depending on the task context. We discuss the implications for understanding the self, and future directions for research. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Aedes albopictus in Italy: an underestimated health problem].

PubMed

Romi, R

2001-01-01

Since 1990, Ae. albopictus has spread in 9 regions and 30 provinces of the country. This species was introduced in Italy in shipments of scrap tires form the USA. In Italy, Ae. albopictus is the major biting pest throughout much of its range and, although there is no evidence that this mosquito is the vector of human disease in the country, the species might be involved in the transmission of some arboviruses which have been reported in the Mediterranean Basin. Aim of this paper is to provide an update on the distribution of Ae. albopictus in Italy and to renew the interest in a problem frequently underestimated. Public health implications after a ten-year presence of the species are also discussed.

Mutation spectrum of fork-head transcriptional factor gene (FOXL2) in Indian Blepharophimosis Ptosis Epicanthus Inversus Syndrome (BPES) patients.

PubMed

Kaur, Inderjeet; Hussain, Avid; Naik, Milind N; Murthy, Ramesh; Honavar, Santosh G

2011-06-01

The fork-head transcription factor gene (FOXL2) gene has been implicated in Blepharophimosis Ptosis Epicanthus Inversus Syndrome (BPES) type I and type II. The authors aimed to evaluate the involvement of FOXL2 in familial and sporadic cases of BPES in an Indian cohort. The present cohort comprised clinically well-characterised BPES cases that included six affected families, two sporadic cases and 60 unaffected normal controls. The 5' untranslated and coding region of FOXL2 was screened by resequencing and confirmed by restriction digestion. Further, genotype-phenotype correlations were done to understand the implications of the observed mutation. Six mutations were observed in eight cases (87.5%). These included a novel deletion (c.860delC), three previously reported duplications (c.663-692dup 30, c.672-701dup30 and c.843-859dup17), a frame shift (c.804dupC) and a homozygous missense mutation (p.E69K). The p.E69k mutation was seen in both heterozygous and homozygous form in a large four-generational family, and disease severity was found to be directly linked to the allelic dosage. Two SNPs (c.501C→T, c.536C→G) were also noted. An unusual coexistence of polycystic ovarian disease (PCOD) with BPES was also seen in one of the families. Mutations in the region downstream of the fork-head domain were predominantly responsible for BPES among Indian patients.

DHX9 helicase is involved in preventing genomic instability induced by alternatively structured DNA in human cells

PubMed Central

Jain, Aklank; Bacolla, Albino; del Mundo, Imee M.; Zhao, Junhua; Wang, Guliang; Vasquez, Karen M.

2013-01-01

Sequences that have the capacity to adopt alternative (i.e. non-B) DNA structures in the human genome have been implicated in stimulating genomic instability. Previously, we found that a naturally occurring intra-molecular triplex (H-DNA) caused genetic instability in mammals largely in the form of DNA double-strand breaks. Thus, it is of interest to determine the mechanism(s) involved in processing H-DNA. Recently, we demonstrated that human DHX9 helicase preferentially unwinds inter-molecular triplex DNA in vitro. Herein, we used a mutation-reporter system containing H-DNA to examine the relevance of DHX9 activity on naturally occurring H-DNA structures in human cells. We found that H-DNA significantly increased mutagenesis in small-interfering siRNA-treated, DHX9-depleted cells, affecting mostly deletions. Moreover, DHX9 associated with H-DNA in the context of supercoiled plasmids. To further investigate the role of DHX9 in the recognition/processing of H-DNA, we performed binding assays in vitro and chromatin immunoprecipitation assays in U2OS cells. DHX9 recognized H-DNA, as evidenced by its binding to the H-DNA structure and enrichment at the H-DNA region compared with a control region in human cells. These composite data implicate DHX9 in processing H-DNA structures in vivo and support its role in the overall maintenance of genomic stability at sites of alternatively structured DNA. PMID:24049074

DHX9 helicase is involved in preventing genomic instability induced by alternatively structured DNA in human cells.

PubMed

Jain, Aklank; Bacolla, Albino; Del Mundo, Imee M; Zhao, Junhua; Wang, Guliang; Vasquez, Karen M

2013-12-01

Sequences that have the capacity to adopt alternative (i.e. non-B) DNA structures in the human genome have been implicated in stimulating genomic instability. Previously, we found that a naturally occurring intra-molecular triplex (H-DNA) caused genetic instability in mammals largely in the form of DNA double-strand breaks. Thus, it is of interest to determine the mechanism(s) involved in processing H-DNA. Recently, we demonstrated that human DHX9 helicase preferentially unwinds inter-molecular triplex DNA in vitro. Herein, we used a mutation-reporter system containing H-DNA to examine the relevance of DHX9 activity on naturally occurring H-DNA structures in human cells. We found that H-DNA significantly increased mutagenesis in small-interfering siRNA-treated, DHX9-depleted cells, affecting mostly deletions. Moreover, DHX9 associated with H-DNA in the context of supercoiled plasmids. To further investigate the role of DHX9 in the recognition/processing of H-DNA, we performed binding assays in vitro and chromatin immunoprecipitation assays in U2OS cells. DHX9 recognized H-DNA, as evidenced by its binding to the H-DNA structure and enrichment at the H-DNA region compared with a control region in human cells. These composite data implicate DHX9 in processing H-DNA structures in vivo and support its role in the overall maintenance of genomic stability at sites of alternatively structured DNA.

Ground-penetrating radar investigation of active faults along the Dead Sea Transform and implications for seismic hazards within the city of Aqaba, Jordan

NASA Astrophysics Data System (ADS)

Slater, Lee; Niemi, Tina M.

2003-06-01

Ground-penetrating radar (GPR) was used in an effort to locate a major active fault that traverses Aqaba City, Jordan. Measurements over an exposed (trenched) cross fault outside of the city identify a radar signature consisting of linear events and horizontal offset/flexured reflectors both showing a geometric correlation with two known faults at a control site. The asymmetric linear events are consistent with dipping planar reflectors matching the known direction of dip of the faults. However, other observations regarding this radar signature render the mechanism generating these events more complex and uncertain. GPR measurements in Aqaba City were limited to vacant lots. Seven GPR profiles were conducted approximately perpendicular to the assumed strike of the fault zone, based on regional geological evidence. A radar response very similar to that obtained over the cross fault was observed on five of the profiles in Aqaba City, although the response is weaker than that obtained at the control site. The positions of the identified responses form a near straight line with a strike of 45°. Although subsurface verification of the fault by trenching within the city is needed, the geophysical evidence for fault zone location is strong. The location of the interpreted fault zone relative to emergency services, military bases, commercial properties, and residential areas is defined to within a few meters. This study has significant implications for seismic hazard analysis in this tectonically active and heavily populated region.

Lineament Azimuths on Europa: Implications for Evolution of the Europan Ice Shell

NASA Astrophysics Data System (ADS)

Kachingwe, M.; Rhoden, A.; Lekic, V.; Hurford, T., Jr.; Henning, W. G.

2016-12-01

Tectonic activity on Europa has been linked to tidal stress caused by its eccentric orbit, finite obliquity, and possibly non-synchronous rotation of the icy shell. Cycloids and other lineaments are thought to form in response to tidal normal stress while strike-slip motion along preexisting faults has been attributed to tidal shear stress. Tectonic features can thus provide constraints on the rotational parameters that govern tidal stress and insight into the tidal-tectonic processes operating on ice-covered ocean bodies. Past lineament azimuth predictions based on stress models accounting for either spin pole precession or longitude translation yielded distributions that varied with location on Europa (e.g. Hurford, 2005; Fig. 16 of Rhoden and Hurford, 2013). Until now, these predicted azimuths have only been tested on a few spatially restricted regions. Additionally, these predictions were made using a thin shell approximation, which neglects the viscoelastic response of Europa's ice shell. Here, we present new measurements of lineament azimuths across geographically diverse regions of Europa, focusing on locations where lineament azimuths have never before been measured but which have been imaged at better than 250 km/pixel resolution. We focus on lineaments that do not exhibit substantial curvature, and we quantify deviations in azimuth observed along each lineament. We quantitatively compare the observed distributions against published predictions as well as new predictions made with a viscoelastic tidal stress model. These results have implications for Europa's interior and the evolution of tidal stress over time.

A U-Rich Element in the 5′ Untranslated Region Is Necessary for the Translation of p27 mRNA

PubMed Central

Millard, S. Sean; Vidal, Anxo; Markus, Maurice; Koff, Andrew

2000-01-01

Increased translation of p27 mRNA correlates with withdrawal of cells from the cell cycle. This raised the possibility that antimitogenic signals might mediate their effects on p27 expression by altering complexes that formed on p27 mRNA, regulating its translation. In this report, we identify a U-rich sequence in the 5′ untranslated region (5′UTR) of p27 mRNA that is necessary for efficient translation in proliferating and nonproliferating cells. We show that a number of factors bind to the 5′UTR in vitro in a manner dependent on the U-rich element, and their availability in the cytosol is controlled in a growth- and cell cycle-dependent fashion. One of these factors is HuR, a protein previously implicated in mRNA stability, transport, and translation. Another is hnRNP C1 and C2, proteins implicated in mRNA processing and the translation of a specific subset of mRNAs expressed in differentiated cells. In lovastatin-treated MDA468 cells, the mobility of the associated hnRNP C1 and C2 proteins changed, and this correlated with increased p27 expression. Together, these data suggest that the U-rich dependent RNP complex on the 5′UTR may regulate the translation of p27 mRNA and may be a target of antimitogenic signals. PMID:10913178

Bypass diode for a solar cell

DOEpatents

Rim, Seung Bum; Kim, Taeseok; Smith, David D; Cousins, Peter J

2013-11-12

Methods of fabricating bypass diodes for solar cells are described. In once embodiment, a method includes forming a first conductive region of a first conductivity type above a substrate of a solar cell. A second conductive region of a second conductivity type is formed on the first conductive region. In another embodiment, a method includes forming a first conductive region of a first conductivity type above a substrate of a solar cell. A second conductive region of a second conductivity type is formed within, and surrounded by, an uppermost portion of the first conductive region but is not formed in a lowermost portion of the first conductive region.

Architecture of the human renal inner medulla and functional implications

PubMed Central

Wei, Guojun; Rosen, Seymour; Dantzler, William H.

2015-01-01

The architecture of the inner stripe of the outer medulla of the human kidney has long been known to exhibit distinctive configurations; however, inner medullary architecture remains poorly defined. Using immunohistochemistry with segment-specific antibodies for membrane fluid and solute transporters and other proteins, we identified a number of distinctive functional features of human inner medulla. In the outer inner medulla, aquaporin-1 (AQP1)-positive long-loop descending thin limbs (DTLs) lie alongside descending and ascending vasa recta (DVR, AVR) within vascular bundles. These vascular bundles are continuations of outer medullary vascular bundles. Bundles containing DTLs and vasa recta lie at the margins of coalescing collecting duct (CD) clusters, thereby forming two regions, the vascular bundle region and the CD cluster region. Although AQP1 and urea transporter UT-B are abundantly expressed in long-loop DTLs and DVR, respectively, their expression declines with depth below the outer medulla. Transcellular water and urea fluxes likely decline in these segments at progressively deeper levels. Smooth muscle myosin heavy chain protein is also expressed in DVR of the inner stripe and the upper inner medulla, but is sparsely expressed at deeper inner medullary levels. In rodent inner medulla, fenestrated capillaries abut CDs along their entire length, paralleling ascending thin limbs (ATLs), forming distinct compartments (interstitial nodal spaces; INSs); however, in humans this architecture rarely occurs. Thus INSs are relatively infrequent in the human inner medulla, unlike in the rodent where they are abundant. UT-B is expressed within the papillary epithelium of the lower inner medulla, indicating a transcellular pathway for urea across this epithelium. PMID:26290371

Kinetic and Spectroscopic Studies of Bicupin Oxalate Oxidase and Putative Active Site Mutants

PubMed Central

Moomaw, Ellen W.; Hoffer, Eric; Moussatche, Patricia; Salerno, John C.; Grant, Morgan; Immelman, Bridget; Uberto, Richard; Ozarowski, Andrew; Angerhofer, Alexander

2013-01-01

Ceriporiopsis subvermispora oxalate oxidase (CsOxOx) is the first bicupin enzyme identified that catalyzes manganese-dependent oxidation of oxalate. In previous work, we have shown that the dominant contribution to catalysis comes from the monoprotonated form of oxalate binding to a form of the enzyme in which an active site carboxylic acid residue must be unprotonated. CsOxOx shares greatest sequence homology with bicupin microbial oxalate decarboxylases (OxDC) and the 241-244DASN region of the N-terminal Mn binding domain of CsOxOx is analogous to the lid region of OxDC that has been shown to determine reaction specificity. We have prepared a series of CsOxOx mutants to probe this region and to identify the carboxylate residue implicated in catalysis. The pH profile of the D241A CsOxOx mutant suggests that the protonation state of aspartic acid 241 is mechanistically significant and that catalysis takes place at the N-terminal Mn binding site. The observation that the D241S CsOxOx mutation eliminates Mn binding to both the N- and C- terminal Mn binding sites suggests that both sites must be intact for Mn incorporation into either site. The introduction of a proton donor into the N-terminal Mn binding site (CsOxOx A242E mutant) does not affect reaction specificity. Mutation of conserved arginine residues further support that catalysis takes place at the N-terminal Mn binding site and that both sites must be intact for Mn incorporation into either site. PMID:23469254

Relationship between potential aggregation-prone regions and HLA-DR-binding T-cell immune epitopes: implications for rational design of novel and follow-on therapeutic antibodies.

PubMed

Kumar, Sandeep; Mitchell, Mark A; Rup, Bonita; Singh, Satish K

2012-08-01

Aggregation and unwanted immunogenicity are hurdles to avoid in successful commercial development of antibody-based therapeutics. In this article, the relationship between aggregation-prone regions (APRs), capable of forming cross-β motifs/amyloid fibrils, and major histocompatibility complex class II-restricted human leukocyte antigen (HLA)-DR-binding T-cell immune epitopes (TcIEs) is analyzed using amino acid sequences of 25 therapeutic antibodies, 55 TcIEs recognized by T-regulatory cells (tregitopes), 1000 randomly generated 15-residue-long peptides, 2257 human self-TcIEs (autoantigens), and 11 peptides in HLA-peptide cocrystal structures. Sequence analyses from these diverse sources consistently show a high level of correlation between APRs and TcIEs: approximately one-third of TcIEs contain APRs, but the majority of APRs occur within TcIE regions (TcIERs). Tregitopes also contain APRs. Most APR-containing TcIERs can bind multiple HLA-DR alleles, suggesting that aggregation-driven adverse immune responses could impact a broad segment of patient population. This article has identified common molecular sequence-structure loci that potentially contribute toward both manufacturability and safety profiles of the therapeutic antibodies, thereby laying a foundation for simultaneous optimization of these attributes in novel and follow-on candidates. Incidence of APRs within TcIERs is not special to biotherapeutics, self-TcIEs from human proteins, involved in various diseases, also contain predicted APRs and experimentally proven amyloid-fibril-forming peptide sequence portions. Copyright © 2012 Wiley Periodicals, Inc.

Synergistic and additive properties of the beta-globin locus control region (LCR) revealed by 5'HS3 deletion mutations: implication for LCR chromatin architecture.

PubMed

Fang, Xiangdong; Sun, Jin; Xiang, Ping; Yu, Man; Navas, Patrick A; Peterson, Kenneth R; Stamatoyannopoulos, George; Li, Qiliang

2005-08-01

Deletion of the 234-bp core element of the DNase I hypersensitive site 3 (5'HS3) of the locus control region (LCR) in the context of a human beta-globin locus yeast artificial chromosome (beta-YAC) results in profound effects on globin gene expression in transgenic mice. In contrast, deletion of a 2.3-kb 5'HS3 region, which includes the 234-bp core sequence, has a much milder phenotype. Here we report the effects of these deletions on chromatin structure in the beta-globin locus of adult erythroblasts. The 234-bp 5'HS3 deletion abolished histone acetylation throughout the beta-globin locus; recruitment of RNA polymerase II (pol II) to the LCR and beta-globin gene promoter was reduced to a basal level; and formation of all the 5' DNase I hypersensitive sites of the LCR was disrupted. The 2.3-kb 5'HS3 deletion mildly reduced the level of histone acetylation but did not change the profile across the whole locus; the 5' DNase I hypersensitive sites of the LCR were formed, but to a lesser extent; and recruitment of pol II was reduced, but only marginally. These data support the hypothesis that the LCR forms a specific chromatin structure and acts as a single entity. Based on these results we elaborate on a model of LCR chromatin architecture which accommodates the distinct phenotypes of the 5'HS3 and HS3 core deletions.

Molecular profiling of the developing avian telencephalon: regional timing and brain subdivision continuities.

PubMed

Chen, Chun-Chun; Winkler, Candace M; Pfenning, Andreas R; Jarvis, Erich D

2013-11-01

In our companion study (Jarvis et al. [2013] J Comp Neurol. doi: 10.1002/cne.23404) we used quantitative brain molecular profiling to discover that distinct subdivisions in the avian pallium above and below the ventricle and the associated mesopallium lamina have similar molecular profiles, leading to a hypothesis that they may form as continuous subdivisions around the lateral ventricle. To explore this hypothesis, here we profiled the expression of 16 genes at eight developmental stages. The genes included those that define brain subdivisions in the adult and some that are also involved in brain development. We found that phyletic hierarchical cluster and linear regression network analyses of gene expression profiles implicated single and mixed ancestry of these brain regions at early embryonic stages. Most gene expression-defined pallial subdivisions began as one ventral or dorsal domain that later formed specific folds around the lateral ventricle. Subsequently a clear ventricle boundary formed, partitioning them into dorsal and ventral pallial subdivisions surrounding the mesopallium lamina. These subdivisions each included two parts of the mesopallium, the nidopallium and hyperpallium, and the arcopallium and hippocampus, respectively. Each subdivision expression profile had a different temporal order of appearance, similar in timing to the order of analogous cell types of the mammalian cortex. Furthermore, like the mammalian pallium, expression in the ventral pallial subdivisions became distinct during prehatch development, whereas the dorsal portions did so during posthatch development. These findings support the continuum hypothesis of avian brain subdivision development around the ventricle and influence hypotheses on homologies of the avian pallium with other vertebrates. Copyright © 2013 Wiley Periodicals, Inc.

Ontogeny of the morphology-performance axis in an amphibious fish (Kryptolebias marmoratus).

PubMed

Styga, Joseph M; Houslay, Thomas M; Wilson, Alastair J; Earley, Ryan L

2017-12-01

Establishing links between morphology and performance is important for understanding the functional, ecological, and evolutionary implications of morphological diversity. Relationships between morphology and performance are expected to be age dependent if, at different points during ontogeny, animals must perform in different capacities to achieve high fitness returns. Few studies have examined how the relationship between form and function changes across ontogeny. Here, we assess this relationship in the amphibious mangrove rivulus (Kryptolebias marmoratus) fish, a species that is both capable of and reliant on "tail-flip jumping" for terrestrial locomotion. Tail-flip jumping entails an individual transferring its weight to the caudal region of the body, launching itself from the substrate to navigate to new aquatic or semi-aquatic habitats. By combining repeated trials of jumping performance in 237 individuals from distinct age classes with a clearing and staining procedure to visualize bones in the caudal region, we test the hypotheses that as age increases (i) average jumping performance (body lengths jumped) will increase, (ii) the amount of variation for each trait will change, and (iii) the patterns of covariation/correlation among traits, which tell us about the integration of form with function, will also change. We find a significant increase in size-adjusted jumping performance with age, and modification to the correlation structure among traits across ontogeny. However, we also find that significant links between form and function evident in young animals disappear at later ontogenetic stages. Our study suggests that different functional mechanisms may be associated with high performance at different stages of development. © 2018 Wiley Periodicals, Inc.

Advanced stages of embryonic development and cotylocidial morphogenesis in the intrauterine eggs of Aspidogaster limacoides Diesing, 1835 (Aspidogastrea), with comments on their phylogenetic implications.

PubMed

Świderski, Zdzisław; Poddubnaya, Larisa G; Gibson, David I; Młocicki, Daniel

2012-06-01

Ultrastructural aspects of the advanced embryonic development and cotylocidial morphogenesis of the aspidogastrean Aspidogaster limacoides are described. The posterior or distal regions of the uterus are filled with eggs containing larvae at advanced stages of morphogenesis and fully-formed cotylocidia. Various stages and organs of this larva are described in detail, including the aspects of the developing and fully-differentiated cotylocidium, the body wall (tegument and musculature), glandular regions and the protonephridial excretory system. Blastomere multiplication by means of mitotic divisions takes place simultaneously with the degeneration or apoptosis of some micromeres; this frequently observed characteristic is compared and discussed in relation to corresponding reports for other neodermatans. During the advanced stages of the embryonic development of A. limacoides, the vitelline syncytium disappears and the size of the embryo increases rapidly. Evident polarization of the differentiating larva was observed; towards one pole of the egg, cytodifferentiation of the mouth, surrounded by the oral sucker and cephalic glands, takes place, whereas, towards the opposite pole, differentiation of the posterior sucker (incipient ventral disc) occurs. The oral and posterior suckers are formed from numerous embryonic cells which have differentiated into myocytes. The central part of the oral sucker undergoes invagination and forms the future pharynx and intestine. Fully-developed cotylocidia of A. limacoides have a neodermatan type of tegument, flame cells and two types of glandular structures. These results suggest a sister relationship between the Aspidogastrea and the Digenea, although the systematic position of aspidogastreans in relation to other platyhelminth taxa remains somewhat equivocal.

Figure-ground assignment to a translating contour: a preference for advancing vs. receding motion.

PubMed

Barenholtz, Elan; Tarr, Michael J

2009-05-28

Past research on figure-ground assignment to contours has largely considered static stimuli. Here we report a simple and extremely robust dynamic cue to figural assignment, based on whether the bounding region of a contour is growing larger within the field of view ("advancing") rather than smaller ("receding"). Subjects viewed a straight or jagged contour dividing two colored regions translating behind a virtual aperture and had to report which color they had seen "moving in front", effectively assigning figure to that side of the contour. Across three experiments, subjects showed a strong preference to assign figure such that the bounded contour was advancing. This was true regardless of the direction of motion of the contour and regardless of the initial/ending size of the bounded regions (i.e., the motion cue served to override the conventional cue to figure-ground of smaller area). In a fourth, control experiment, subjects showed no such bias when it was the aperture, rather than the contour, that moved, demonstrating that the effect depends on contour motion and not simply an increase in area. We discuss a possible explanation for this bias as well as the general implications regarding dynamic factors in form perception.

Global and regional drivers of accelerating CO2 emissions

PubMed Central

Raupach, Michael R.; Marland, Gregg; Ciais, Philippe; Le Quéré, Corinne; Canadell, Josep G.; Klepper, Gernot; Field, Christopher B.

2007-01-01

CO2 emissions from fossil-fuel burning and industrial processes have been accelerating at a global scale, with their growth rate increasing from 1.1% y−1 for 1990–1999 to >3% y−1 for 2000–2004. The emissions growth rate since 2000 was greater than for the most fossil-fuel intensive of the Intergovernmental Panel on Climate Change emissions scenarios developed in the late 1990s. Global emissions growth since 2000 was driven by a cessation or reversal of earlier declining trends in the energy intensity of gross domestic product (GDP) (energy/GDP) and the carbon intensity of energy (emissions/energy), coupled with continuing increases in population and per-capita GDP. Nearly constant or slightly increasing trends in the carbon intensity of energy have been recently observed in both developed and developing regions. No region is decarbonizing its energy supply. The growth rate in emissions is strongest in rapidly developing economies, particularly China. Together, the developing and least-developed economies (forming 80% of the world's population) accounted for 73% of global emissions growth in 2004 but only 41% of global emissions and only 23% of global cumulative emissions since the mid-18th century. The results have implications for global equity. PMID:17519334

Higher education is an age-independent predictor of white matter integrity and cognitive control in late adolescence.

PubMed

Noble, Kimberly G; Korgaonkar, Mayuresh S; Grieve, Stuart M; Brickman, Adam M

2013-09-01

Socioeconomic status is an important predictor of cognitive development and academic achievement. Late adolescence provides a unique opportunity to study how the attainment of socioeconomic status (in the form of years of education) relates to cognitive and neural development, during a time when age-related cognitive and neural development is ongoing. During late adolescence it is possible to disambiguate age- and education-related effects on the development of these processes. Here we assessed the degree to which higher educational attainment was related to performance on a cognitive control task, controlling for age. We then used diffusion tensor imaging (DTI) to assess the degree to which white matter microstructure might mediate this relationship. When covarying age, significant associations were found between educational attainment and fractional anisotropy (FA) in the superior longitudinal fasciculus (SLF) and cingulum bundle (CB). Further, when covarying age, FA in these regions was associated with cognitive control. Finally, mediation analyses revealed that the age-independent association between educational attainment and cognitive control was completely accounted for by FA in these regions. The uncinate fasciculus, a late-myelinated control region not implicated in cognitive control, did not mediate this effect. © 2013 John Wiley & Sons Ltd.

RSRM TP-H1148 Main Grain Propellant Crack Initiation Evaluation

NASA Technical Reports Server (NTRS)

Earnest, Todd E.

2005-01-01

Pressurized TP-HI 148 propellant fracture toughness testing was performed to assess the potential for initiation of visually undetectable cracks in the RSRM forward segment transition region during motor ignition. Two separate test specimens were used in this evaluation. Testing was performed in cold-gas and hot-fire environments, and under both static and dynamic pressurization conditions. Analysis of test results demonstrates safety factors against initiation of visually undetectable cracks in excess of 8.0. The Reusable Solid Rocket Motor (RSRM) forward segment is cast with PBAN propellant (TP-HI 148) to form T an 1 1-point star configuration that transitions to a tapered center perforated bore (see Figure 1). The geometry of the transition region between the fin valleys and the bore causes a localized area of high strain during horizontal storage. Updated analyses using worst-case mechanical properties at 40 F and improved modeling techniques indicated a slight reduction in safety margins over previous predictions. Although there is no history of strain induced cracks or flaws in the transition region propellant, a proactive test effort was initiated to better understand the implications of the new analysis, primarily the resistance of TP-H1148 propellant to crack initiation' during RSRM ignition.

Relationship between high- and low-grade Archean terranes: Implications for early Earth paleogeography

NASA Technical Reports Server (NTRS)

Eriksson, K. A.

1986-01-01

The Western Gneiss Terrain (WGT) of the Yilgarn Block, Western Australia was studied. The WGT forms an arcuate belt of Archean gneisses that flank the western margin of the Yilgarn Block. In general the WGT is composed of high-grade orthogneisses and paragneisses which contain supracrustal belts composed largely of siliciclastic metasediments and subordinate iron formation. The platformal nature of the metasedimentary belts and lack of obvious metavolcanic lithologies contrasts with the composition of typical Yilgarn greenstones to the east. Radiometric data from WGT rocks indicates that these rocks are significantly older than Yilgarn rocks to the east (less than 3.3 Ga) and this has led to the suggestion that the WGT represents sialic basement to Yilgarn granite-greenstone belts. The Mount Narryer region exposes the northernmost occurrence of high-grade metasediments within the WGT and consists of quartz-rich clastic metasediments at upper amphibolite to granulite grade. Most occurrences of supracrustal rocks in this region comprise isolated lenses within the gneissic basement. However, at Mount Narryer a unique sequence of metaclastics with preserved bedding provide an unusual window into the parentage of similar supracrustal bodies in this region.

Ionotropic NMDA receptor signaling is required for the induction of long-term depression in the mouse hippocampal CA1 region.

PubMed

Babiec, Walter E; Guglietta, Ryan; Jami, Shekib A; Morishita, Wade; Malenka, Robert C; O'Dell, Thomas J

2014-04-09

Previous studies have provided strong support for the notion that NMDAR-mediated increases in postsynaptic Ca(2+) have a crucial role in the induction of long-term depression (LTD). This view has recently been challenged, however, by findings suggesting that LTD induction is instead attributable to an ion channel-independent, metabotropic form of NMDAR signaling. Thus, to explore the role of ionotropic versus metabotropic NMDAR signaling in LTD, we examined the effects of varying extracellular Ca(2+) levels or blocking NMDAR channel ion fluxes with MK-801 on LTD and NMDAR signaling in the mouse hippocampal CA1 region. We find that the induction of LTD in the adult hippocampus is highly sensitive to extracellular Ca(2+) levels and that MK-801 blocks NMDAR-dependent LTD in the hippocampus of both adult and immature mice. Moreover, MK-801 inhibits NMDAR-mediated activation of p38-MAPK and dephosphorylation of AMPAR GluA1 subunits at sites implicated in LTD. Thus, our results indicate that the induction of LTD in the hippocampal CA1 region is dependent on ionotropic, rather than metabotropic, NMDAR signaling.

Regional Influences on Chinese Medicine Education: Comparing Australia and Hong Kong

PubMed Central

Chung, Vincent C. H.; Zhang, Anthony L.; Adams, Jon

2016-01-01

High quality education programs are essential for preparing the next generation of Chinese medicine (CM) practitioners. Currently, training in CM occurs within differing health and education policy contexts. There has been little analysis of the factors influencing the form and status of CM education in different regions. Such a task is important for understanding how CM is evolving internationally and predicting future workforce characteristics. This paper compares the status of CM education in Australia and Hong Kong across a range of dimensions: historical and current positions in the national higher education system, regulatory context and relationship to the health system, and public and professional legitimacy. The analysis highlights the different ways in which CM education is developing in these settings, with Hong Kong providing somewhat greater access to clinical training opportunities for CM students. However, common trends and challenges shape CM education in both regions, including marginalisation from mainstream health professions, a small but established presence in universities, and an emphasis on biomedical research. Three factors stand out as significant for the evolution of CM education in Australia and Hong Kong and may have international implications: continuing biomedical dominance, increased competition between universities, and strengthened links with mainland China. PMID:27379170

The neuroscience of musical improvisation.

PubMed

Beaty, Roger E

2015-04-01

Researchers have recently begun to examine the neural basis of musical improvisation, one of the most complex forms of creative behavior. The emerging field of improvisation neuroscience has implications not only for the study of artistic expertise, but also for understanding the neural underpinnings of domain-general processes such as motor control and language production. This review synthesizes functional magnetic resonance imagining (fMRI) studies of musical improvisation, including vocal and instrumental improvisation, with samples of jazz pianists, classical musicians, freestyle rap artists, and non-musicians. A network of prefrontal brain regions commonly linked to improvisatory behavior is highlighted, including the pre-supplementary motor area, medial prefrontal cortex, inferior frontal gyrus, dorsolateral prefrontal cortex, and dorsal premotor cortex. Activation of premotor and lateral prefrontal regions suggests that a seemingly unconstrained behavior may actually benefit from motor planning and cognitive control. Yet activation of cortical midline regions points to a role of spontaneous cognition characteristic of the default network. Together, such results may reflect cooperation between large-scale brain networks associated with cognitive control and spontaneous thought. The improvisation literature is integrated with Pressing's theoretical model, and discussed within the broader context of research on the brain basis of creative cognition. Copyright © 2015 Elsevier Ltd. All rights reserved.

Corporate and philanthropic models of hospital governance: a taxonomic evaluation.

PubMed

Weiner, B J; Alexander, J A

1993-08-01

We assess the theoretical integrity and practical utility of the corporate-philanthropic governance typology frequently invoked in debates about the appropriate form of governance for nonprofit hospitals operating in increasingly competitive health care environments. Data were obtained from a 1985 national mailed survey of nonprofit hospitals conducted by the American Hospital Association (AHA) and the Hospital Research and Educational Trust (HRET). A sample 1,577 nonprofit community hospitals were selected for study. Representativeness was assessed by comparing the sample with the population of non-profit community hospitals on the dimensions of bed size, ownership type, urban-rural location, multihospital system membership, and census region. Measurement of governance types was based on hospital governance attributes conforming to those cited in the literature as distinguishing corporate from philanthropic models and classified into six central dimensions of governance: (1) size, (2) committee structure and activity, (3) board member selection, (4) board composition, (5) CEO power and influence, and (6) bylaws and activities. Cluster analysis and ANCOVA indicated that hospital board forms adhered only partially to corporate and philanthropic governance models. Further, board forms varied systematically by specific organizational and environmental conditions. Boards exhibiting more corporate governance forms were more likely to be large, privately owned, urban, and operating in competitive markets than were hospitals showing more philanthropic governance forms. Findings suggest that the corporate-philanthropic governance distinction must be seen as an ideal rather than an actual depiction of hospital governance forms. Implications for health care governance are discussed.

Water-Ammonia Ionic Ocean on Uranus and Neptune-Clue from Tropospheric Hydrogen Sulfide Clouds

NASA Astrophysics Data System (ADS)

Atreya, S. K.; Egeler, P. A.; Wong, A.

2005-12-01

Interior models of the ice-giants, Uranus and Neptune, predict a water-ammonia ionic ocean at tens of kilobar pressure [1,2]. If correct, its implication for planetary formation models is profound. In this presentation we demonstrate that the existence of an ionic ocean will manifest itself in the planets' tropospheric cloud structure, particularly in the form of a hydrogen sulfide, i.e. H2S-ice, cloud. In fact, an H2S cloud was introduced ad hoc in the 3-5 bar region to explain microwave absorption [3] and the methane [4] observations, but its presence cannot be proved in the absence of entry probes. Our equilibrium cloud condensation model (ECCM) shows that an H2S-ice cloud does not form when conventional enrichment factors (20-30× solar at Uranus, and 30-50× solar at Neptune) are employed for all heavy elements (mass >4) [5]. However, a deep ``cloud'' composed of a weak solution of ammonia and water forms, and its base is at 370 and 500 bars, respectively, for 30× solar and 50× solar enrichment factors. If an ionic ``ocean'' exists much deeper, water vapor, as well as ammonia dissolved in it, would be severely depleted at levels above this ocean. The consequences of such water vapor and ammonia depletions are that (1) clouds of water and ammonia, if present, are much less prominent; (2) only small amount of H2S vapor is removed by NH3, to form an NH4SH cloud; so that (3) a cloud of H2S-ice can now form; and (4) an H2O ``ocean'' in the 1-kilobar region [6] does not form. This scenario has important implications for the design of entry probe missions, as measurements to only 10-20 bars, rather than kilobar levels, will need to be made. The heavy elements, Ar, Kr, Xe, Ne, C, and S, as well as He, D/H, GeH4, AsH3, PH3, and CO can all be accessed at pressures less than 20 bars. These measurements are critical for constraining the formation models [5,7,8]. Measurement of water in the well-mixed region of Uranus and Neptune is technologically highly challenging, even if there were no ionic ocean. And, neither H2O nor NH3 can be accessed if there is a deep ionic ocean. On the other hand, if all other heavy elements and above species and isotopes were measured, O and N are not critical for the formation models of Uranus and Neptune [5]. References: [1] Podolak, et al., 1991, in Uranus (J. Bergstralh, et al., eds.), Univ. of Arizona Press. pp 48-49.1991; [2] Ree, FH, Physica, 1986, 139-140B, 73-78; [3] de Pater, et al., 1991, Icarus, 91, 220; [4] Baines, K, Hammel, H, 1994, Icarus, 109, 20 ; [5] Atreya, SK, and Wong, AS, pp121-126, in ``Outer Planets", T. Encrenaz, et al., eds, Springer, 2005; [6] Wiktorowicz, SJ, Ingersoll, AP, 2004 DPS 36.0501; [7] Owen, T, Encrenaz, T, 2003, 106, 121; [8] Atreya, S.K., et al., 2003, Planet Space Sci., 47. 1243.

On The Sfr-M* Main Sequence Archetypal Star-Formation History And Analytical Models

NASA Astrophysics Data System (ADS)

Ciesla, Laure; Elbaz, David; Fensch, Jeremy

2017-06-01

From the evolution of the main sequence we can build the star formation history (SFH) of MS galaxies, assuming that they follow this relation all their life. We show that this SFH is not only a function of cosmic time but also involve the seed mass of the galaxy. We discuss the implications of this MS SFH on the stellar mass growth, and the entry in the passive region of the UVJ diagram, while the galaxy is still forming stars. We test the ability of different analytical SFH forms found in the literature to probe the SFR of all type of galaxies. Using a sample of GOODS-South galaxies, we show that these SFHs artificially enhance or create a gradient of age, parallel to the MS. A simple model of a MS galaxy, such as those expected from compaction or variation in gas accretion, undergoing some fluctuations provide does not predict such a gradient, that we show is due to SFH assumptions. We propose an improved analytical form, taking into account a flexibility in the recent SFH that we calibrate as a diagnostic to identify rapidly quenched galaxies from large photometric survey.

Trafficking in persons: a health concern?

PubMed

Zimmerman, Cathy; Kiss, Ligia; Houssain, Mazeda; Watts, Charlotte

2009-01-01

Human trafficking is a phenomenon that has now been documented in most regions in the world. Although trafficking of women and girls for sexual exploitation is the most commonly recognised form of trafficking, it is widely acknowledged that human trafficking also involves men, women and children who are trafficked for various forms of labour exploitation and into other abusive circumstances. Despite the violence and harm inherent in most trafficking situations, there remains extremely little evidence on the individual and public health implications of any form of human trafficking. The Brazilian government has recently launched a national plan to combat human trafficking. However, because the health risks associated with human trafficking have not been well-recognised or documented, there is extremely limited reliable data on the health needs of trafficked persons to inform policy and practices.. Brazilian policy-makers and service providers should be encouraged to learn about the likely range of health impacts of trafficking, and incorporate this into anti-trafficking protection and response strategies. As well as prevention activities, the government, international and local organisations should work together with the public health research community to study the health needs of trafficked persons and explore opportunities to provide safe and appropriate services to victims in need of care.

South Pole Hydrogen Distribution for Present Lunar Conditions: Implications for Past Impacts

NASA Technical Reports Server (NTRS)

Elphic, R. C.; Paige, D. A.; Siegler, M. A.; Vasavada, A. R.; Eke, V. R.; Teodoro, L. F. A.; Lawrence, D. J.

2010-01-01

It has been known since the Lunar Prospector mission that the poles of the Moon evidently harbor enhanced concentrations of hydrogen [1,2]. The physical and chemical form of the hydrogen has been much debated. Using imagery from Clementine it was possible to roughly estimate permanently-shadowed regions (PSRs), and to perform image reconstructions of the Lunar Prospector epithermal neutron flux maps [3,4]. The hydrogen concentrations resulting from these reconstructions were consistent with a few weight percent water ice in selected locations. With the LCROSS impact, we now know that hydrogen in the form of ice does exist in lunar polar cold traps [5]. Armed with this information, and new data from LRO/Diviner, we can examine whether the pre-sent-day distribution of hydrogen in the form of water ice is consistent with a past large impact that delivered a large mass of volatiles to the lunar surface. These volatiles, mixed with solid impact ejecta, would then be lost from locations having high mean temperatures but would otherwise remain trapped in locations with sufficiently low mean annual temperatures [6]. The time scales for loss would depend on the location-dependent temperatures as well as impact history.

Haemophilus ducreyi Cutaneous Ulcer Strains Diverged from Both Class I and Class II Genital Ulcer Strains: Implications for Epidemiological Studies

PubMed Central

Gangaiah, Dharanesh

2016-01-01

Background Haemophilus ducreyi has emerged as a major cause of cutaneous ulcers (CU) in yaws-endemic regions of the tropics in the South Pacific, South East Asia and Africa. H. ducreyi was once thought only to cause the genital ulcer (GU) disease chancroid; GU strains belong to 2 distinct classes, class I and class II. Using whole-genome sequencing of 4 CU strains from Samoa, 1 from Vanuatu and 1 from Papua New Guinea, we showed that CU strains diverged from the class I strain 35000HP and that one CU strain expressed β-lactamase. Recently, the Center for Disease Control and Prevention released the genomes of 11 additional CU strains from Vanuatu and Ghana; however, the evolutionary relationship of these CU strains to previously-characterized CU and GU strains is unknown. Methodology/Principal Findings We performed phylogenetic analysis of 17 CU and 10 GU strains. Class I and class II GU strains formed two distinct clades. The class I strains formed two subclades, one containing 35000HP and HD183 and the other containing the remainder of the class I strains. Twelve of the CU strains formed a subclone under the class I 35000HP subclade, while 2 CU strains formed a subclone under the other class I subclade. Unexpectedly, 3 of the CU strains formed a subclone under the class II clade. Phylogenetic analysis of dsrA-hgbA-ncaA sequences yielded a tree similar to that of whole-genome phylogenetic tree. Conclusions/Significance CU strains diverged from multiple lineages within both class I and class II GU strains. Multilocus sequence typing of dsrA-hgbA-ncaA could be reliably used for epidemiological investigation of CU and GU strains. As class II strains grow relatively poorly and are relatively more susceptible to vancomycin than class I strains, these findings have implications for methods to recover CU strains. Comparison of contemporary CU and GU isolates would help clarify the relationship between these entities. PMID:28027326

Teaching Regional Perspectives in Canada.

ERIC Educational Resources Information Center

McCreath, Peter

1978-01-01

Defines Canadian regionalism in terms of geographical features and their political, social, and economic implications, rather than in terms of political and provincial boundaries. The significance of regionalism is mentioned as an important topic for Canadian studies. Increasing awareness and acceptance of regional perspectives is presented as an…

Orogenic inheritance in Death Valley region, western US Basin and Range: implications for Neogene crustal extension.

NASA Astrophysics Data System (ADS)

Lima, R. D.; Hayman, N. W.; Prior, M. G.; Stockli, D. F.; Kelly, E. D.

2016-12-01

Deformation and temperature evolution during orogenic stages may influence later fabric development, thus controlling large-scale extensional processes that can occur millions of years later. Here, we describe pressure-temperature and fabric evolution from the Death Valley (DV) region and show how inherited fabrics, formed in late orogenic stages during Late Cretaceous time, influenced later Neogene age Basin and Range (BR) extension. The DV region is one of the most extended and thinned regions in the western US BR province, and the two of the ranges that bound the eastern valley expose basement rocks exhumed during the Neogene extension. In the Funeral range, it has been established that older (Precambrian) basement underwent Mesozoic age syn-deformational metamorphism during the Sevier-Laramide orogeny. In contrast, the Black Mountains record widespread tectonic stretching and magmatism of Miocene age on Precambrian basement, and have, overall, been lacking previous evidence of Mesozoic metamorphism and fabric development. In the Funeral Range Late Cretaceous migmatitic fabrics were overprinted by zones of high-strain fabrics formed due to melt-consuming reaction that define an overall P-T cooling path likely during late- to post-orogenesis. These fabrics form interconnected layers of quartz + biotite aggregates, in which individual quartz grains lack evidence of intracrystalline plastic deformation and show consistently random [c]-axis microfabrics. This suggests coupled reaction-diffusion processes that favored diffusion-assisted creep. New geochronometric results of melt products in the Black Mountains show evidence of partial melting of Late Cretaceous age. Contrasting with the neighboring Funeral Range, overprinting by extensional fabrics of Miocene age is widespread, and consists of high-strain, anastomosing foliation composed of retrograde products from preexisting, higher-temperature fabrics. These include interconnected fine-grained chlorite + quartz and sericite aggregates showing [c]-axis quartz microfabrics consistent with diffusion-assisted creep. In both ranges, the formation of new-over-old fabric due to the extensional deformation is favored by local heterogeneities in bulk composition due previous melt segregation during late- to post-orogenic stages.

Geomorphic investigation of craters in Alba Mons, Mars: Implications for Late Amazonian glacial activity in the region

NASA Astrophysics Data System (ADS)

Sinha, Rishitosh K.; Vijayan, S.

2017-09-01

Evidence for mid-high latitude glacial episodes existing within the Late Amazonian history of Mars has been reported from analysis of variety of glacial/periglacial landforms and their stratigraphic relationships. In this study, using the Context Camera (CTX) images, we have surveyed the interior of craters within the Alba Mons region of Mars (30°-60°N; 80°-140°W) to decipher the presence of ice-related flow features. The primary goals of this study are to (1) suggest from observations that the flow features identified in the interior of Alba Mons craters have flow characteristic possibly different from concentric crater fill (CCF) landforms and (2) interpret the extent of glacial activity that led to formation of flow features with respect to previously described mid-latitude ice-related landforms. Our geomorphic investigation revealed evidence for the presence of tongue-like or lobate shaped ice-related flow feature from the interior of ∼346 craters in the study region. The presence of ring-mold crater morphologies and brain-terrain texture preserved on the surface of flow features suggests that they are possibly formed of near-surface ice-rich bodies. We found that these flow features tend to form inside both the smaller (<5 km) and larger (>5 km) diameter craters emplaced at a wide range of elevation (from ∼ -3.3 km to 6.1 km). The measurement of overall length and flow direction of flow features is suggestive that they are similar to pole-facing small-scale lobate debris apron (LDA) formed inside craters. Crater size-frequency distribution of these small-scale LDAs reveals a model age of ∼10-100 Ma. Together with topographic and geomorphic observations, orientation measurements, and distribution within the study region, we suggest that the flow features (identified as pole-facing small-scale LDAs in the interior of craters) have flow characteristic possibly different from CCF landforms. Our observations and findings support the results of previous analyses that suggests Mars to have preserved records of multiple debris-covered glacial episodes occurred in the Late Amazonian.

The topography of Ceres and implications for the formation of linear surface structures

NASA Astrophysics Data System (ADS)

Buczkowski, D.; Otto, K.; Ruesch, O.; Scully, J. E. C.; Williams, D. A.; Mest, S. C.; Schenk, P.; Jaumann, R.; Nathues, A.; Preusker, F.; Park, R. S.; Raymond, C. A.; Russell, C. T.

2015-12-01

NASA's Dawn spacecraft began orbiting the dwarf planet Ceres in April 2015. Framing Camera data from the Approach (1.3 km/px) and Survey (415 m/px) orbits include digital terrain models derived from processing stereo images. These models have supported various scientific studies of the surface. The eastern hemisphere of Ceres is topographically higher than the western hemisphere. Some of linear structures on Ceres (which include grooves, pit crater chains, fractures and troughs) appear to be radial to the large basins Urvara and Yalode, and most likely formed due to impact processes. However, set of regional linear structures (RLS) that do not have any obvious relationship to impact craters are found on the eastern hemisphere topographic high region. Many of the longer RLS are comprised of smaller structures that have linked together, suggestive of en echelon fractures. Polygonal craters, theorized to form when pervasive subsurface fracturing affects crater formation [1], are widespread on Ceres [2], and those proximal to the RLS have straight crater rims aligned with the grooves and troughs, suggesting that the RLS are fracture systems. A cross-section of one RLS is displayed in FC images of the Occator crater wall. Comparing these images to the digital terrain models show 1) that the structure dips ~60º and 2) there is downward motion on the hanging wall, implying normal faulting. The digital terrain models also reveal the presence of numerous positive relief features with sub-circular shapes. These dome-like features have been tentatively interpreted as volcanic/magmatic features [3]; other possibilities include salt domes. Analog models of domal uplift in areas of regional extension [4] predict patterns of linear structures similar to those observed in the RLS near Occator. Utilizing topography data provided by the Ceres digital terrain models, we assess the relationship between the RLS and nearby domes and topographic high regions to determine the mechanism by which the RLS may have formed. [1] Thomas, P.C. et al. (1999) Icarus, doi: 10.1006/icar.1999.6121 [2] Otto et al. (2015) EPSC2015-284 [3] Ruesch et al. [this meeting] [4] Sims et al. (2013) AAPG Bulletin, doi: 10.1306/02101209136

Visual priming within and across symbolic format using a tachistoscopic picture identification task: a PET study.

PubMed

Lebreton, K; Desgranges, B; Landeau, B; Baron, J C; Eustache, F

2001-07-01

The present work was aimed at characterizing picture priming effects from two complementary behavioral and functional neuroimaging (positron emission tomography, PET) studies. In two experiments, we used the same line drawings of common living/nonliving objects in a tachistoscopic identification task to contrast two forms of priming. In the within-format priming condition (picture-picture), subjects were instructed to perform a perceptual encoding task in the study phase, whereas in the cross-format priming condition (word-picture), they were instructed to perform a semantic encoding task. In Experiment 1, we showed significant priming effects in both priming conditions. However, the magnitude of priming effects in the same-format/perceptual encoding condition was higher than that in the different-format/semantic encoding condition, while the recognition performance did not differ between the two conditions. This finding supports the existence of two forms of priming that may be subserved by different systems. Consistent with these behavioral findings, the PET data for Experiment 2 revealed distinct priming-related patterns of regional cerebral blood flow (rCBF) decreases for the two priming conditions when primed items were compared to unprimed items. The same-format priming condition involved reductions in cerebral activity particularly in the right extrastriate cortex and left cerebellum, while the different-format priming condition was associated with rCBF decreases in the left inferior temporo-occipital cortex, left frontal regions, and the right cerebellum. These results suggest that the extrastriate cortex may subserve general aspects of perceptual priming, independent of the kind of stimuli, and that the right part of this cortex could underlie the same-format-specific system for pictures. These data also support the idea that the cross-format/semantic encoding priming for pictures represents a form of lexico-semantic priming subserved by a semantic neural network extending from left temporo-occipital cortex to left frontal regions. These results reinforce the distinction between perceptual and conceptual priming for pictures, indicating that different cerebral processes and systems are implicated in these two forms of picture priming.

Probing Protoplanetary Disks: From Birth to Planets

NASA Astrophysics Data System (ADS)

Cox, Erin Guilfoil

2018-01-01

Disks are very important in the evolution of protostars and their subsequent planets. How early disks can form has implications for early planet formation. In the youngest protostars (i.e., Class 0 sources) magnetic fields can control disk growth. When the field is parallel to the collapsing core’s rotation axis, infalling material loses angular momentum and disks form in later stages. Sub-/millimeter polarization continuum observations of Class 0 sources at ~1000 au resolution support this idea. However, in the inner (~100 au), denser regions, it is unknown if the polarization only traces aligned dust grains. Recent theoretical studies have shown that self-scattering of thermal emission in the disk may contribute significantly to the polarization. Determining the scattering contribution in these sources is important to disentangle the magnetic field. At older times (the Class II phase), the disk structure can both act as a modulator and signpost of planet formation, if there is enough of a mass reservoir. In my dissertation talk, I will present results that bear on disk evolution at both young and late ages. I will present 8 mm polarization results of two Class 0 protostars (IRAS 4A and IC348 MMS) from the VLA at ~50 au resolution. The inferred magnetic field of IRAS 4A has a circular morphology, reminiscent of material being dragged into a rotating structure. I will show results from SOFIA polarization data of the area surrounding IRAS 4A at ~4000 au. I will also present ALMA 850 micron polarization data of ten protostars in the Perseus Molecular Cloud. Most of these sources show very ordered patterns and low (~0.5%) polarization in their inner regions, while having very disordered patterns and high polarization patterns in their extended emission that may suggest different mechanisms in the inner/outer regions. Finally, I will present results from our ALMA dust continuum survey of protoplanetary disks in Rho Ophiuchus; we measured both the sizes and fluxes of 49 pre main-sequence stellar systems and detected either gaps or cavities in ~6 of these sources. Combined, these results build upon how early protoplanetary disks can form around young protostars and thus how early planets can begin to form.

The Alboran volcanic arc archipelago isolated the Mediterranean during the Messinian salinity crisis forming the land bridge for biota dispersal across the western Mediterranean

NASA Astrophysics Data System (ADS)

Booth-Rea, Guillermo; Ranero, Cesar R.; Grevemeyer, Ingo

2017-04-01

The Mediterranean Sea desiccation during isolation from the world oceans created the well-known Messinian salinity crisis but also landbridges that permitted the exchange of terrestrial biota between Africa and Iberia contributing to the present biodiversity of the Mediterranean region. The hypotheses for the cause chocking the Mediterranean have typically sought to explain geological features, particularly the giant salt deposits, but the implications of the faunal changes occurring around that time remain inadequately integrated by current geological models. We present wide-angle seismic data that constrain for the first time the 16-18 km thick crust structure of a volcanic arc formed mostly between 10 to 6 Ma across the eastern region of the Alboran basin. The crustal structure supports that the arc created an archipelago forming a land bridge across the basin that largely isolated the Mediterranean. After the cessation of volcanic activity, the archipelago progressively submerged by thermal subsidence and accompanying sediment loading, having emerged islands that persisted into the Pleistocene time and shallow straits forming sills during the early Pliocene. The presence of an archipelago in the eastern region of the basin may explain a number of puzzling observations previously inexplicable by the proposed barriers closing the Gibraltar arc west of Alboran. The progressive volcanic build up of the archipelago together with the closure of the Betic and Rifean marine corridors would explain the initial isolation of the Mediterranean since 7.1 Ma and the exchange of terrestrial biota since 6.2 Ma, i.e. before desiccation, which diversified radiating from SE Iberia and the opposite segment of the eastern Rif. In addition, an eastern barrier agrees with the continuous Messinian-age open marine sediments drilled at ODP site 976 in the western Alboran basin, which may have been the refuge of typical Mediterranean taxa that rapidly repopulated the Mediterranean in the Pliocene. Lastly, the proposed eastern barrier agrees well with the western extension of thick salt deposits. In sum, the new models may be able to integrate for the first time sedimentological, faunal, oceanographical and tectonic patterns, previously not explained by a single geodynamic model.

Three-dimensional reconstruction of prostate cancer architecture with serial immunohistochemical sections: hallmarks of tumour growth, tumour compartmentalisation, and implications for grading and heterogeneity.

PubMed

Tolkach, Yuri; Thomann, Stefan; Kristiansen, Glen

2018-05-01

Conventional morphology of prostate cancer considers only the two-dimensional (2D) architecture of the tumour. Our aim was to examine the feasibility of three-dimensional (3D) reconstruction of tumour morphology based on multiple consecutive histological sections and to decipher relevant features of prostate cancer architecture. Seventy-five consecutive histological sections (5 μm) of a typical prostate adenocarcinoma (Gleason score of 3 + 4 = 7) were immunostained (pan-cytokeratin) and scanned for further 3D reconstructions with fiji/imagej software. The main findings related to the prostate cancer architecture in this case were: (i) continuity of all glands, with the tumour being an integrated system, even in Gleason pattern 4 with poorly formed glands-no short-range migration of cells by Gleason pattern 4 (poorly formed glands); (ii) no repeated interconnections between the glands, with a tumour building a tree-like branched structure with very 'plastic' branches (maximal depth of investigation 375 μm); (iii) very stark compartmentalisation of the tumour related to extensive branching, the coexistence of independent terminal units of such branches in one 2D slice explaining intratumoral heterogeneity; (iv) evidence of a craniocaudal growth direction in interglandular regions of the prostate and for a lateromedial growth direction in subcapsular posterolateral regions; and (v) a 3D architecture-based description of Gleason pattern 4 with poorly formed glands, and its continuum with Gleason pattern 3. Consecutive histological sections provide high-quality material for 3D reconstructions of the tumour architecture, with excellent resolution. The reconstruction of multiple regions in this typical case of a Gleason score 3 + 4 = 7 tumour provides insights into relevant aspects of tumour growth, the continuity of Gleason patterns 3 and 4, and tumour heterogeneity. © 2018 John Wiley & Sons Ltd.

The curious history of Tethys as evidenced by irregular craters and variable tectonism

NASA Astrophysics Data System (ADS)

Ferguson, S. N.; Rhoden, A.; Nayak, M.; Asphaug, E. I.

2017-12-01

At first glance, the surface of Saturn's moon Tethys appears dominated by craters and its large canyon system, Ithaca Chasma. However, high-resolution Cassini imagery reveals a surface rife with curious geologic features, perhaps indicative of non-heliocentric impact populations and, potentially, a history of tectonic activity. We mapped three regions on Tethys to survey the diversity of features present on the surface, determine crater counts for each region, map and analyze fracture patterns, and identify constraints on the impactor populations. One study region is just south and west of the Odysseus impact basin (R1), and the other two regions sit slightly west of Ithaca Chasma (R2 and R3). The regions were imaged at average resolutions of 200m/pix, which is adequate to identify craters down to D=1km. Of 1200 total craters counted, we have identified 195 elliptical craters and 28 polygonal craters. Elliptical craters likely form from slow, oblique impacts, whereas polygonal craters are indicative of underlying tectonic structure. We identified 605 small craters, D=1-2km, across the three regions; we find that R1 has many more 1-10 km craters than R2 and R3. We also mapped 367 linear features. The median and range of orientations of the linear features vary across the regions. Despite their proximity, the orientations of lineations in R2 and R3 are not consistent with the orientation of Ithaca Chasma. This could be suggestive of different epochs of tectonic activity on Tethys. When compared with R2 and R3, R1 has more small craters, more lineations, and a preferred orientation of lineations that is distinct from the other two regions. Possible causes for a larger population of small craters in R1 include secondary craters from Odysseus and oblique impacts from debris ejected from Tethys' co-orbital moons, which should create many more 1km craters in R1 than the other regions. Due to the oblique impact angles predicted for incoming co-orbital debris, these impacts may have also produced some of the lineations observed in R1. Oblique impacts can also form elliptical craters, but that would imply much larger debris than expected from the craters presently observed on the co-orbitals. We discuss additional analysis and implications of Tethys' curious geologic features on its bombardment and tectonic history.

Nature and tectonic implications of uneven sedimentary filling of the South China Sea oceanic basin

NASA Astrophysics Data System (ADS)

Yin, Shaoru; Li, Jiabiao; Ding, Weiwei; Fang, Yinxia

2017-04-01

The IODP Expedition 349 in 2014, for the first time, illustrated significant differences of sediment rate and lithology in the central South China Sea (SCS) oceanic basin. Based on seismic reflection profiles tied to IODP349 drilling data, we investigated characteristics of sedimentary filling of the whole SCS oceanic basin, and examined their implications for tectonics. Results show that sediments fill the SCS oceanic basin mainly in three depositional patterns. Firstly, during the Oligocene to middle Miocene, sediments amassed almost solely and then connected like a band parallel to the continent in a low average sediment rate (<10 m/Myr) in the northern oceanic basin. These sediments were deposited mainly in the form of submarine fans and mass transport deposits. Sediments were predominately supplied by the Red and Pearl Rivers and the Dongsha Islands. The sedimentary characteristics likely reflect the latest early Miocene end of seafloor spreading of the SCS and the first-phase rapid uplift of the Tibetan Plateau. Secondly, during the late Miocene, deposition mainly occurred in the Northwest Sub-basin and extended southeastward with a middle average sediment rate ( 30 m/Myr). Sediments were mostly transported by the Red River and Xisha Trough and deposited in the form of submarine fans. The abnormal increase of sediment rate in the Northwest Sub-basin reflects late Miocene slip reversal of the Red River Fault. Finally, since the Pliocene, sediments gradually propagated northeastward in the Southwestern Sub-basin, and accumulated rapidly in the southeastern and northeastern basin, especially in the northern Manila Trench during the Quaternary, in an average sediment rate about 60-80 m/Myr. These sediments were transported mainly by submarine canyons and settled in the form of submarine fans and canyon-overbank deposition. Sediments came from four major sources, including Taiwan, Dongsha Islands, Mekong River, and northern Palawan. The Pliocene to Quaternary explosion of uneven sedimentary filling in the SCS oceanic basin points to the combined action of local and regional tectonics, including the two-phase rapid uplift of the Tibetan Plateau, the Pliocene to Quaternary increased northwestward movement of the Philippine Sea plate and Dongsha event. This study exhibits hitherto most completed observation of sedimentary filling of the SCS oceanic basin and provides new geophysical evidences for the local and regional important tectonics.

Searching for Prebiotically Important Molecules in Protoplanetary Disks

NASA Astrophysics Data System (ADS)

Gibb, Erika L.; Brown, L. R.; Sudholt, E.

2012-05-01

Understanding how prebiotic molecules form and are distributed around young stars is an important step in determining how and where life can form in planetary systems. In general, protoplanetary disks consist of a cold, dense midplane where, beyond the frost line, water and organic molecules will condense onto dust grains as icy coatings. The surface of the disk is exposed to stellar and interstellar radiation, giving rise to a photon-dominated region characterized by ionization and dissociation products. Between these two layers is a warm molecular layer where a rich molecular chemistry is predicted to occur. The warm molecular layer is somewhat protected from ionizing radiation by the dust and polycyclic aromatic hydrocarbons (PAHs) in the surface region. We present a high-resolution (λ / Δλ 25,000), near-infrared spectroscopic survey of the L-band toward T Tauri star GV Tau N. The data were acquired with the NIRSPEC instrument on the Keck II telescope, located on Mauna Kea, HI. We detected strong HCN absorption lines that we interpret to be located in the warm molecular layer of a nearly edge-on protoplanetary disk. We discuss significant differences in spectra acquired in 2006 and 2010 and implications for the material in the disk of GV Tau N, including rotational temperatures, abundances, and inferred location. This work was supported by the NSF Stellar Astronomy Program (Grant #0908230) and the NASA Exobiology program (NNX11AG44G).

Dark-matter admixed white dwarfs

NASA Astrophysics Data System (ADS)

Leung, Shing Chi; Chu, Ming Chung; Lin, Lap Ming; Wong, Ka Wing

2014-03-01

We study the equilibrium structures of white dwarfs (WD) with dark matter cores formed by non-self-annihilating dark matter (DM) particles with masses ranging from 1 GeV to 100 GeV, assuming in form of an ideal degenerate Fermi gas inside the stars. For DM particles of mass 10 GeV and 100 GeV, we find that stable stellar models exist only if the mass of the DM core inside the star is less than O and -3)Msun , respectively. The global properties of these stars, and the corresponding Chandrasekhar mass (CM) limits, are essentially the same as those of traditional WD models without DM. Nevertheless, in the 10 GeV case, the gravitational attraction of the DM core is strong enough to squeeze the normal matter in the core region to densities above neutron drip. For the 1 GeV case, the DM core inside the star can be as massive as O and affects the global structure of the star significantly. The radius of a stellar model with DM can be about two times smaller than that of a traditional WD. Furthermore, the CM limit can be decreased by as much as 40%. Our results may have implications on the extent to which type Ia supernovae can be regarded as standard candles. This work is partially supported by a grant from the Research Grant Council of the Hong Kong Special Administrative Region, China (Project No. 400910).

A postmortem analysis of NMDA ionotropic and group 1 metabotropic glutamate receptors in the nucleus accumbens in schizophrenia.

PubMed

Lum, Jeremy S; Millard, Samuel J; Huang, Xu-Feng; Ooi, Lezanne; Newell, Kelly A

2018-03-01

The nucleus accumbens (NAcc) has been implicated in the pathology and treatment of schizophrenia. Recent postmortem evidence suggests a hyperglutamatergic state in the NAcc. With the present study we aimed to explore possible glutamatergic alterations in the NAcc of a large schizophrenia cohort. We performed immunoblots on postmortem NAcc samples from 30 individuals who had schizophrenia and 30 matched controls. We examined the protein expression of primary glutamatergic receptors, including the N -methyl-D-aspartate (NMDA) receptor (NR1, NR2A and NR2B subunits) and the group 1 metabotropic glutamate receptor (mGluR1 and mGluR5; dimeric and monomeric forms). In addition, we measured the group 1 mGluR endogenous regulators, neurochondrin and Homer1b/c, which have recently been implicated in the pathophysiology of schizophrenia. Protein levels of glutamatergic receptors and endogenous regulators were not significantly different between the controls and individuals who had schizophrenia. Furthermore, mGluR5, but not mGluR1, showed a positive association with NMDA receptor subunits, suggesting differential interactions between these receptors in this brain region. Investigation of these proteins in antipsychotic-naive individuals, in addition to the subregions of the NAcc and subcellular fractions, will strengthen future studies. The present study does not provide evidence for glutamatergic abnormalities within the NAcc of individuals with schizophrenia. Taken together with the results of previous studies, these findings suggest NMDA receptors and group 1 mGluRs are altered in a brain region-dependent manner in individuals with schizophrenia. The differential associations between mGluR1, mGluR5 and NMDA receptors observed in this study warrant further research into the interactions of these proteins and the implications for the therapeutic and adverse effect profile of glutamatergic-based novel therapeutics.

A postmortem analysis of NMDA ionotropic and group 1 metabotropic glutamate receptors in the nucleus accumbens in schizophrenia.

PubMed

Lum, Jeremy S; Millard, Samuel J; Huang, Xu-Feng; Ooi, Lezanne; Newell, Kelly A

2017-10-06

The nucleus accumbens (NAcc) has been implicated in the pathology and treatment of schizophrenia. Recent postmortem evidence suggests a hyperglutamatergic state in the NAcc. With the present study we aimed to explore possible glutamatergic alterations in the NAcc of a large schizophrenia cohort. We performed immunoblots on postmortem NAcc samples from 30 individuals who had schizophrenia and 30 matched controls. We examined the protein expression of primary glutamatergic receptors, including the N -methyl-D-aspartate (NMDA) receptor (NR1, NR2A and NR2B subunits) and the group 1 metabotropic glutamate receptor (mGluR1 and mGluR5; dimeric and monomeric forms). In addition, we measured the group 1 mGluR endogenous regulators, neurochondrin and Homer1b/c, which have recently been implicated in the pathophysiology of schizophrenia. Protein levels of glutamatergic receptors and endogenous regulators were not significantly different between the controls and individuals who had schizophrenia. Furthermore, mGluR5, but not mGluR1, showed a positive association with NMDA receptor subunits, suggesting differential interactions between these receptors in this brain region. Investigation of these proteins in antipsychotic-naive individuals, in addition to the subregions of the NAcc and subcellular fractions, will strengthen future studies. The present study does not provide evidence for glutamatergic abnormalities within the NAcc of individuals with schizophrenia. Taken together with the results of previous studies, these findings suggest NMDA receptors and group 1 mGluRs are altered in a brain region-dependent manner in individuals with schizophrenia. The differential associations between mGluR1, mGluR5 and NMDA receptors observed in this study warrant further research into the interactions of these proteins and the implications for the therapeutic and adverse effect profile of glutamatergic-based novel therapeutics.

Massive Star Formation Viewed through Extragalactic-Tinted Glasses

NASA Astrophysics Data System (ADS)

Willis, Sarah; Marengo, M.; Smith, H. A.; Allen, L.

2014-01-01

Massive Galactic star forming regions are the local analogs to the luminous star forming regions that dominate the emission from star forming galaxies. Their proximity to us enables the characterization of the full range of stellar masses that form in these more massive environments, improving our understanding of star formation tracers used in extragalactic studies. We have surveyed a sample of massive star forming regions with a range of morphologies and luminosities to probe the star formation activity in a variety of environments. We have used Spitzer IRAC and deep ground based J, H, Ks observations to characterize the Young Stellar Object (YSO) content of 6 massive star forming regions. These YSOs provide insight into the rate and efficiency of star formation within these regions, and enable comparison with nearby, low mass star forming regions as well as extreme cases of Galactic star formation including ‘mini-starburst’ regions. In addition, we have conducted an in-depth analysis of NGC 6334 to investigate how the star formation activity varies within an individual star forming region, using Herschel data in the far-infrared to probe the earliest stages of the ongoing star formation activity.

Electrical isolation of component cells in monolithically interconnected modules

DOEpatents

Wanlass, Mark W.

2001-01-01

A monolithically interconnected photovoltaic module having cells which are electrically connected which comprises a substrate, a plurality of cells formed over the substrate, each cell including a primary absorber layer having a light receiving surface and a p-region, formed with a p-type dopant, and an n-region formed with an n-type dopant adjacent the p-region to form a single pn-junction, and a cell isolation diode layer having a p-region, formed with a p-type dopant, and an n-region formed with an n-type dopant adjacent the p-region to form a single pn-junction, the diode layer intervening the substrate and the absorber layer wherein the absorber and diode interfacial regions of a same conductivity type orientation, the diode layer having a reverse-breakdown voltage sufficient to prevent inter-cell shunting, and each cell electrically isolated from adjacent cells with a vertical trench trough the pn-junction of the diode layer, interconnects disposed in the trenches contacting the absorber regions of adjacent cells which are doped an opposite conductivity type, and electrical contacts.

Essays on the Impacts of Geography and Institutions on Access to Energy and Public Infrastructure Services

NASA Astrophysics Data System (ADS)

Archibong, Belinda

While previous literature has emphasized the importance of energy and public infrastructure services for economic development, questions surrounding the implications of unequal spatial distribution in access to these resources remain, particularly in the developing country context. This dissertation provides evidence on the nature, origins and implications of this distribution uniting three strands of research from the development and political economy, regional science and energy economics fields. The dissertation unites three papers on the nature of spatial inequality of access to energy and infrastructure with further implications for conflict risk , the historical institutional and biogeographical determinants of current distribution of access to energy and public infrastructure services and the response of households to fuel price changes over time. Chapter 2 uses a novel survey dataset to provide evidence for spatial clustering of public infrastructure non-functionality at schools by geopolitical zone in Nigeria with further implications for armed conflict risk in the region. Chapter 3 investigates the drivers of the results in chapter 2, exploiting variation in the spatial distribution of precolonial institutions and geography in the region, to provide evidence for the long-term impacts of these factors on current heterogeneity of access to public services. Chapter 4 addresses the policy implications of energy access, providing the first multi-year evidence on firewood demand elasticities in India, using the spatial variation in prices for estimation.

Social cost of carbon pricing of power sector CO2: accounting for leakage and other social implications from subnational policies

NASA Astrophysics Data System (ADS)

Bistline, John E.; Rose, Steven K.

2018-01-01

In environments where climate policy has partial coverage or unequal participation, carbon dioxide (CO2) emissions or economic activity may shift to locations and sectors where emissions are unregulated. This is referred to as leakage. Leakage can offset or augment emissions reductions associated with a policy, which has important environmental and economic implications. Although leakage has been studied at national levels, analysis of leakage for subnational policies is limited. This is despite greater market integration and many existing state and regional environmental regulations in the US. This study explores leakage potential, net emissions changes, and other social implications in the US energy system with regionally differentiated pricing of power sector CO2 emissions. We undertake an economic analysis using EPRI’s US-REGEN model, where power sector CO2 emissions are priced in individual US regions with a range of social cost of carbon (SCC) values. SCC estimates are being considered by policy-makers for valuing potential societal damages from CO2 emissions. In this study, we evaluate the emissions implications within the SCC pricing region, within the power sector outside the SCC region, and outside the power sector (i.e. in the rest of the energy system). Results indicate that CO2 leakage is possible within and outside the electric sector, ranging from negative 70% to over 80% in our scenarios, with primarily positive leakage outcomes. Typically ignored in policy analysis, leakage would affect CO2 reduction benefits. We also observe other potential societal effects within and across regions, such as higher electricity prices, changes in power sector investments, and overall consumption losses. Efforts to reduce leakage, such as constraining power imports into the SCC pricing region likely reduce leakage, but could also result in lower net emissions reductions, as well as larger price increases. Thus, it is important to look beyond leakage and consider a broader set of environmental and economic metrics. Leakage rates, net emissions outcomes, electricity price changes, fuel market effects, and macroeconomic costs vary by region of the country, time, policy stringency, policy design (e.g. leakage mitigation provisions), policy environment in neighboring regions, and price responsiveness of demand.

Study, Talk, and Action. A Report of a National Conference on Regionalism and Regionalization in American Postsecondary Education.

ERIC Educational Resources Information Center

Martorana, S. V., Ed.; Nespoli, Lawrence A., Ed.

This report of a National Conference on Regionalism and Regionalization in American Postsecondary Education contains an overview and summary of the final project report, a keynote address, four papers on the implications of regionalism, some reactor comments, an essay on leadership, and four descriptive accounts of operational regionalization…

Autism: reduced connectivity between cortical areas involved in face expression, theory of mind, and the sense of self.

PubMed

Cheng, Wei; Rolls, Edmund T; Gu, Huaguang; Zhang, Jie; Feng, Jianfeng

2015-05-01

Whole-brain voxel-based unbiased resting state functional connectivity was analysed in 418 subjects with autism and 509 matched typically developing individuals. We identified a key system in the middle temporal gyrus/superior temporal sulcus region that has reduced cortical functional connectivity (and increased with the medial thalamus), which is implicated in face expression processing involved in social behaviour. This system has reduced functional connectivity with the ventromedial prefrontal cortex, which is implicated in emotion and social communication. The middle temporal gyrus system is also implicated in theory of mind processing. We also identified in autism a second key system in the precuneus/superior parietal lobule region with reduced functional connectivity, which is implicated in spatial functions including of oneself, and of the spatial environment. It is proposed that these two types of functionality, face expression-related, and of one's self and the environment, are important components of the computations involved in theory of mind, whether of oneself or of others, and that reduced connectivity within and between these regions may make a major contribution to the symptoms of autism. © The Author (2015). Published by Oxford University Press on behalf of the Guarantors of Brain.

Populations of High-Luminosity Density-Bounded HII Regions in Spiral Galaxies? Evidence and Implications

NASA Technical Reports Server (NTRS)

Beckman, J. E.; Rozas, M.; Zurita, A.; Watson, R. A.; Knapen, J. H.

2000-01-01

In this paper we present evidence that the H II regions of high luminosity in disk galaxies may be density bounded, so that a significant fraction of the ionizing photons emitted by their exciting OB stars escape from the regions. The key piece of evidence is the presence, in the Ha luminosity functions (LFs) of the populations of H iI regions, of glitches, local sharp peaks at an apparently invariant luminosity, defined as the Stromgren luminosity Lstr), LH(sub alpha) = Lstr = 10(sup 38.6) (+/- 10(sup 0.1)) erg/ s (no other peaks are found in any of the LFs) accompanying a steepening of slope for LH(sub alpha) greater than Lstr This behavior is readily explicable via a physical model whose basic premises are: (a) the transition at LH(sub alpha) = Lstr marks a change from essentially ionization bounding at low luminosities to density bounding at higher values, (b) for this to occur the law relating stellar mass in massive star-forming clouds to the mass of the placental cloud must be such that the ionizing photon flux produced within the cloud is a function which rises more steeply than the mass of the cloud. Supporting evidence for the hypothesis of this transition is also presented: measurements of the central surface brightnesses of H II regions for LH(sub alpha) less than Lstr are proportional to L(sup 1/3, sub H(sub alpha)), expected for ionization bounding, but show a sharp trend to a steeper dependence for LH(sub alpha) greater than Lstr, and the observed relation between the internal turbulence velocity parameter, sigma, and the luminosity, L, at high luminosities, can be well explained if these regions are density bounded. If confirmed, the density-bounding hypothesis would have a number of interesting implications. It would imply that the density-bounded regions were the main sources of the photons which ionize the diffuse gas in disk galaxies. Our estimates, based on the hypothesis, indicate that these regions emit sufficient Lyman continuum not only to ionize the diffuse medium, but to cause a typical spiral to emit significant ionizing flux into the intergalactic medium. The low scatter observed in Lstr, less than 0.1 mag rms in the still quite small sample measured to date, is an invitation to widen the data base, and to calibrate against primary standards, with the aim of obtaining a precise, approx. 10(exp 5) solar luminosity widely distributed standard candle.

Beyond the Solar Circle - Tracing Trends in Massive Star Formation for the Inner and Outer Galaxy

NASA Astrophysics Data System (ADS)

Djordjevic, Julie; Thompson, Mark; Urquhart, James

2018-01-01

Observations towards nearby galaxies are biased towards massive stars, affecting simulations and typically overestimating models for galactic evolution and star formation rates. The Milky Way provides an ideal template for studying the key factors that affect these massive star formation rates and efficiencies at high resolution, fine-tuning those models. We examine trends in massive star formation through the Galactic distribution of compact and ultracompact HII regions (UC HII regions) identified and confirmed as genuine via multi-wavelength inspection of submillimeter, radio, and infrared survey data. Previous catalogs focused on the inner Galaxy (RGC ≤ 8.5 kpc) but results from the recently completed SASSy 850 µm survey with JCMT’s SCUBA-2 show potential star forming clumps out to ~20 kpc. We follow a similar approach to Urquhart et at. (2013) who compiled a catalog of UC HII regions by cross matching CORNISH 5 GHz data with ATLASGAL 870 µm and GLIMPSE 3-color images. The CORNISH survey, however, was limited to the range 10° < l < 60° . By utilizing the RMS radio and infrared catalogs which cover the entire Galactic plane, we can examine the remaining ATLASGAL regions (300° < l < 10° ) as well as the SASSy ranges (60° < l < 240°). With this method we more than doubled the sample size of the CORNISH study, finding a grand total of 539 embedded UC HII regions across the Galaxy. We derive their properties and also look at the parameters of the host clumps to determine the implications for massive star formation rates and efficiencies as a function of galactocentric radius. We find that there is no significant change in the rate of massive star formation in the outer vs inner Galaxy. However, many of the potentially star forming SASSy clumps have no available radio counterpart to confirm the presence of an HII region or other star formation tracer. This begs the question whether there really is less star formation in this area or whether simply a lack of available data. Hence, we also present early results from follow-up radio observations with the VLA on selected SASSy clumps.

The Formation of Frost and Liquid Brines on Spacecraft Materials at Mars Environmental Conditions

NASA Astrophysics Data System (ADS)

Fischer, Erik; Martinez, German; Neamati, Daniel; Renno, Nilton O.

2017-10-01

There is evidence that frost formed on the camera calibration target of the Opportunity Rover [1], and that frozen brine splashed on the struts of the Phoenix lander during landing melted, producing droplets of liquid brine [2]. Moreover, there is evidence that tiny amounts of frost might have formed at the MSL landing site, early in the morning during the coldest winter sols [3].The Michigan Mars Environmental Chamber (MMEC) is capable of simulating temperatures ranging from ~90 to 500 K, atmospheric pressures ranging from ~10-3 to 105 Pa, and relative humidity ranging from less than 1% to 100%. The MMEC is also capable of simulating the diurnal and seasonal cycles of the Mars polar, mid-latitudes, and equatorial regions (including Mars Special Regions). Moreover, the MMEC is equipped with instruments to study the formation of frost and liquid brines [4,5].We use the MMEC to study the formation of frost and brine droplets on spacecraft materials. Our laboratory experiments indicate that frost forms on spacecraft materials at Mars environmental conditions. They also indicate that small amounts of liquid brine could form on spacecraft surfaces if salts are present (e.g., deposited with dust aerosols or splashed during landing) when frost forms. These results have important implications for planetary protection.Our main goal is to identify the spacecraft materials on which frost and liquid brines are most likely and least likely to form at the environmental conditions created by a Mars lander. This will improve our understanding of forward contamination so that standards for spacecraft fabrication and operations can be refined in order to minimize planetary contamination.References:[1] Landis, G. A. (2007). Lunar Planet. Sci. Conference 38, 2423.[2] Rennó, N. O., et al. (2009). J. Geophys. Res.: Planets (1991-2012), 114(E1).[3] Martínez, G. M., et al. (2016). Icarus, 280, 93-102.[4] Fischer, E., et al. (2014). Geophys. Res. Lett. 41(13), 4456-4462.[5] Fischer, E., et al. (2016). Astrobiology, 16(12), 937-948.

Perspectives on Global and Regional Security and Implications of Nuclear and Space Technologies: U.S.-Brazil Strategic Dialogue, Phase 2 Report

DTIC Science & Technology

2014-10-01

its leadership of the regional opposition to the U.S.- Colombian anti-drug trafficking and terrorism partnership. Brazil has been critical of U.S... legislative action. There is no system for the President to push through legislation , as there is in the United States. All bills must go through both...the development of the defense industry. The political implications are that legislation can easily be halted or speeded along, based on the

Population genetic analysis of Mountain Plover using mitochondrial DNA sequence data

USGS Publications Warehouse

Oyler-McCance, S.J.; St. John, J.; Knopf, F.L.; Quinn, T.W.

2005-01-01

Mountain Plover (Charadrius montanus) distribution and abundance have been reduced drastically in the past 30 years and the conversion of shortgrass prairie to agriculture has caused breeding populations to become geographically isolated. This, coupled with the fact that Mountain Plovers are thought to show fidelity to breeding grounds, leads to the prediction that the isolated breeding populations would be genetically distinct. This pattern, if observed, would have important management implications for a species at risk of extinction. Our study examined genetic variation at two mitochondrial regions for 20–30 individuals from each of four breeding sites. We found no evidence of significant population differentiation in the data from the control region or the ATPase 6/8 region. Nested-clade analysis revealed no relationship between haplotype phylogeny, and geography among the 47 control region haplotypes. In the ATPase 6/8 region, however, one of the two clades provided information suggesting that, historically, there has been continuous range expansion. Analysis of mismatch distributions and Tajima's D suggest that the Mountain Plover underwent a population expansion, following the Pleistocene glacial period. To explain the lack of detectable genetic differentiation among populations, despite their geographic isolation and fidelity to breeding locations, we speculate that there is sufficient female-mediated gene flow to homogenize gene pools among populations. Such gene flow might ensue if pair bonds are formed in mixed flocks on wintering grounds rather than on the summer breeding grounds.

Translocation and deletion breakpoints in cancer genomes are associated with potential non-B DNA-forming sequences.

PubMed

Bacolla, Albino; Tainer, John A; Vasquez, Karen M; Cooper, David N

2016-07-08

Gross chromosomal rearrangements (including translocations, deletions, insertions and duplications) are a hallmark of cancer genomes and often create oncogenic fusion genes. An obligate step in the generation of such gross rearrangements is the formation of DNA double-strand breaks (DSBs). Since the genomic distribution of rearrangement breakpoints is non-random, intrinsic cellular factors may predispose certain genomic regions to breakage. Notably, certain DNA sequences with the potential to fold into secondary structures [potential non-B DNA structures (PONDS); e.g. triplexes, quadruplexes, hairpin/cruciforms, Z-DNA and single-stranded looped-out structures with implications in DNA replication and transcription] can stimulate the formation of DNA DSBs. Here, we tested the postulate that these DNA sequences might be found at, or in close proximity to, rearrangement breakpoints. By analyzing the distribution of PONDS-forming sequences within ±500 bases of 19 947 translocation and 46 365 sequence-characterized deletion breakpoints in cancer genomes, we find significant association between PONDS-forming repeats and cancer breakpoints. Specifically, (AT)n, (GAA)n and (GAAA)n constitute the most frequent repeats at translocation breakpoints, whereas A-tracts occur preferentially at deletion breakpoints. Translocation breakpoints near PONDS-forming repeats also recur in different individuals and patient tumor samples. Hence, PONDS-forming sequences represent an intrinsic risk factor for genomic rearrangements in cancer genomes. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

Single gate p-n junctions in graphene-ferroelectric devices

NASA Astrophysics Data System (ADS)

Hinnefeld, J. Henry; Xu, Ruijuan; Rogers, Steven; Pandya, Shishir; Shim, Moonsub; Martin, Lane W.; Mason, Nadya

2016-05-01

Graphene's linear dispersion relation and the attendant implications for bipolar electronics applications have motivated a range of experimental efforts aimed at producing p-n junctions in graphene. Here we report electrical transport measurements of graphene p-n junctions formed via simple modifications to a PbZr0.2Ti0.8O3 substrate, combined with a self-assembled layer of ambient environmental dopants. We show that the substrate configuration controls the local doping region, and that the p-n junction behavior can be controlled with a single gate. Finally, we show that the ferroelectric substrate induces a hysteresis in the environmental doping which can be utilized to activate and deactivate the doping, yielding an "on-demand" p-n junction in graphene controlled by a single, universal backgate.

Thermodynamic stability of RNA structures formed by CNG trinucleotide repeats. Implication for prediction of RNA structure.

PubMed

Broda, Magdalena; Kierzek, Elzbieta; Gdaniec, Zofia; Kulinski, Tadeusz; Kierzek, Ryszard

2005-08-16

Trinucleotide repeat expansion diseases (TREDs) are correlated with elongation of CNG DNA and RNA repeats to pathological level. This paper shows, for the first time, complete data concerning thermodynamic stabilities of RNA with CNG trinucleotide repeats. Our studies include the stability of oligoribonucleotides composed of two to seven of CAG, CCG, CGG, and CUG repeats. The thermodynamic parameters of helix propagation correlated with the presence of multiple N-N mismatches within CNG RNA duplexes were also determined. Moreover, the total stability of CNG RNA hairpins, as well as the contribution of trinucleotide repeats placed only in the stem or loop regions, was evaluated. The improved thermodynamic parameters allow to predict much more accurately the thermodynamic stabilities and structures of CNG RNAs.

The genetic basis of panic and phobic anxiety disorders.

PubMed

Smoller, Jordan W; Gardner-Schuster, Erica; Covino, Jennifer

2008-05-15

Panic disorder and phobic anxiety disorders are common disorders that are often chronic and disabling. Genetic epidemiologic studies have documented that these disorders are familial and moderately heritable. Linkage studies have implicated several chromosomal regions that may harbor susceptibility genes; however, candidate gene association studies have not established a role for any specific loci to date. Increasing evidence from family and genetic studies suggests that genes underlying these disorders overlap and transcend diagnostic boundaries. Heritable forms of anxious temperament, anxiety-related personality traits and neuroimaging assays of fear circuitry may represent intermediate phenotypes that predispose to panic and phobic disorders. The identification of specific susceptibility variants will likely require much larger sample sizes and the integration of insights from genetic analyses of animal models and intermediate phenotypes. Copyright 2008 Wiley-Liss, Inc.

Geohydrological Implications of Climate Change on Water Resource Development

DTIC Science & Technology

1979-05-01

Region 16 - Great Basin ............................... 130 11. Region 17 - Pacific Northwest......................... 135 18. Region 18 - California...Great Basin Region. 131 51. Location and drainage of the Pacific Northwest Region. 135 52. Distribution of major aquifers in the Pacific Northwest 139...individual stations within the Great Basin Region. 26. Estimated ratios of Q scenario/Q present for average temp- 133 eratures and precipitation within the

Pathological findings in dicephalus dipus dibrachius: implications for mechanisms in two pairs of lateral conjoined twins.

PubMed

Itoh, K; Imai, Y; Obayashi, C; Hayashi, Y; Hanioka, K; Itoh, H

1993-06-01

The anatomical and pathological features of two pairs of dicephalic conjoined twins (case 1 and 2) are described. Both twins showed duplicitas lateralis representing diprosopus dipus dibrachius. There were two complete heads on two necks, one thorax, one abdomen and externally normal two arms and two legs. Case 1 showed dicephalus with anencephaly, two vertebral columns and two spinal cords, which converged from the thoracic region distally. The esophagus, stomachs and partial small intestines were duplicated, which fused at yolk sac (with Meckel's diverticulum). The heart was incompletely fused. The lungs and trachea were doubled. Two spinal cords were fused from the thoracic region caudally and showed myelomeningocele and Arnold-Chiari malformation in case 2. Two larynxes and two thracheas connected with the incompletely fused three lobes of lungs. The conjoined lungs were hypoplastic. The heart was single, showing ventral septal defect, transposition of great arteries, two cuspid aortic valves and preductal aortic coarctation. The duplicated esophagi were conjoined in Y-shape and single stomach, duodenum, intestine and colon were found. There were pairs of kidneys, adrenal glands and ureters and single female genitalia in both cases. These findings indicate that the craniocaudal paleoaxes were separated in the cranial region and converted or fused under the thoracic region like a Y-shape. Further development defects and deformations might be important factors to form malformations in these case.

The inhabited environment, infrastructure development and advanced urbanization in China’s Yangtze River Delta Region

NASA Astrophysics Data System (ADS)

Zhu, Xiaoqing; Gao, Weijun; Zhou, Nan; Kammen, Daniel M.; Wu, Yiqun; Zhang, Yao; Chen, Wei

2016-12-01

This paper analyzes the relationship among the inhabited environment, infrastructure development and environmental impacts in China’s heavily urbanized Yangtze River Delta region. Using primary human environment data for the period 2006-2014, we examine factors affecting the inhabited environment and infrastructure development: urban population, GDP, built-up area, energy consumption, waste emission, transportation, real estate and urban greenery. Then we empirically investigate the impact of advanced urbanization with consideration of cities’ differences. Results from this study show that the growth rate of the inhabited environment and infrastructure development is strongly influenced by regional development structure, functional orientations, traffic network and urban size and form. The effect of advanced urbanization is more significant in large and mid-size cities than huge and mega cities. Energy consumption, waste emission and real estate in large and mid-size cities developed at an unprecedented rate with the rapid increase of economy. However, urban development of huge and mega cities gradually tended to be saturated. The transition development in these cities improved the inhabited environment and ecological protection instead of the urban construction simply. To maintain a sustainable advanced urbanization process, policy implications included urban sprawl control polices, ecological development mechanisms and reforming the economic structure for huge and mega cities, and construct major cross-regional infrastructure, enhance the carrying capacity and improvement of energy efficiency and structure for large and mid-size cities.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Otto, C., Thomas, G.A.; Peticolas, W.L.; Rippe, K.

Raman spectra of the parallel-stranded duplex formed from the deoxyoligonucleotides 5{prime}-d-((A){sub 10}TAATTTTAAATATTT)-3{prime} (D1) and 5{prime}-d((T){sub 10}ATTAAAATTTATAAA)-3{prime} (D2) in H{sub 2}O and D{sub 2}O have been acquired. The spectra of the parallel-stranded DNA are then compared to the spectra of the antiparallel double helix formed from the deoxyoligonucleotides D1 and 5{prime}-d(AAATATTTAAAATTA-(T){sub 10})-3{prime} (D3). The Raman spectra of the antiparallel-stranded (aps) duplex are reminiscent of the spectra of poly(d(A)){center dot}poly(d(T)) and a B-form structure similar to that adopted by the homopolymer duplex is assigned to the antiparallel double helix. The spectra of the parallel-stranded (ps) and antiparallel-stranded duplexes differ significantly due tomore » changes in helical organization, i.e., base pairing, base stacking, and backbone conformation. Large changes observed in the carbonyl stretching region implicate the involvement of the C(2) carbonyl of thymine in base pairing. The interaction of adenine with the C(2) carbonyl of thymine is consistent with formation of reverse Watson-Crick base pairing in parallel-stranded DNA. Phosphate-furanose vibrations similar to those observed for B-form DNA of heterogeneous sequence and high A,T content are observed at 843 and 1,092 cm{sup {minus}1} in the spectra of the parallel-stranded duplex.« less

Method of forming contacts for a back-contact solar cell

DOEpatents

Manning, Jane

2013-07-23

Methods of forming contacts for back-contact solar cells are described. In one embodiment, a method includes forming a thin dielectric layer on a substrate, forming a polysilicon layer on the thin dielectric layer, forming and patterning a solid-state p-type dopant source on the polysilicon layer, forming an n-type dopant source layer over exposed regions of the polysilicon layer and over a plurality of regions of the solid-state p-type dopant source, and heating the substrate to provide a plurality of n-type doped polysilicon regions among a plurality of p-type doped polysilicon regions.

28 CFR 542.15 - Appeals.

Code of Federal Regulations, 2010 CFR

2010-07-01

... response may submit an Appeal on the appropriate form (BP-10) to the appropriate Regional Director within... Regional Director's response may submit an Appeal on the appropriate form (BP-11) to the General Counsel... appeal. (b) Form. (1) Appeals to the Regional Director shall be submitted on the form designed for...

28 CFR 542.15 - Appeals.

Code of Federal Regulations, 2011 CFR

2011-07-01

... response may submit an Appeal on the appropriate form (BP-10) to the appropriate Regional Director within... Regional Director's response may submit an Appeal on the appropriate form (BP-11) to the General Counsel... appeal. (b) Form. (1) Appeals to the Regional Director shall be submitted on the form designed for...

MULTIPLE CURRENT SHEET SYSTEMS IN THE OUTER HELIOSPHERE: ENERGY RELEASE AND TURBULENCE

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burgess, D.; Gingell, P. W.; Matteini, L.

2016-05-01

In the outer heliosphere, beyond the solar wind termination shock, it is expected that the warped heliospheric current sheet forms a region of closely packed, multiple, thin current sheets. Such a system may be subject to the ion-kinetic tearing instability, and hence may generate magnetic islands and hot populations of ions associated with magnetic reconnection. Reconnection processes in this environment have important implications for local particle transport, and for particle acceleration at reconnection sites and in turbulence. We study this complex environment by means of three-dimensional hybrid simulations over long timescales, in order to capture the evolution from linear growthmore » of the tearing instability to a fully developed turbulent state at late times. The final state develops from the highly ordered initial state via both forward and inverse cascades. Component and spectral anisotropy in the magnetic fluctuations is present when a guide field is included. The inclusion of a population of newborn interstellar pickup protons does not strongly affect these results. Finally, we conclude that reconnection between multiple current sheets can act as an important source of turbulence in the outer heliosphere, with implications for energetic particle acceleration and propagation.« less

Dance and the brain: a review.

PubMed

Karpati, Falisha J; Giacosa, Chiara; Foster, Nicholas E V; Penhune, Virginia B; Hyde, Krista L

2015-03-01

Dance is a universal form of human expression that offers a rich source for scientific study. Dance provides a unique opportunity to investigate brain plasticity and its interaction with behavior. Several studies have investigated the behavioral correlates of dance, but less is known about the brain basis of dance. Studies on dance observation suggest that long- and short-term dance training affect brain activity in the action observation and simulation networks. Despite methodological challenges, the feasibility of conducting neuroimaging while dancing has been demonstrated, and several brain regions have been implicated in dance execution. Preliminary work from our laboratory suggests that long-term dance training changes both gray and white matter structure. This article provides a critical summary of work investigating the neural correlates of dance. It covers functional neuroimaging studies of dance observation and performance as well as structural neuroimaging studies of expert dancers. To stimulate ongoing dialogue between dance and science, future directions in dance and brain research as well as implications are discussed. Research on the neuroscience of dance will lead to a better understanding of brain-behavior relationships and brain plasticity in experts and nonexperts and can be applied to the development of dance-based therapy programs. © 2014 New York Academy of Sciences.

Alien Phytogeographic Regions of Southern Africa: Numerical Classification, Possible Drivers, and Regional Threats

PubMed Central

Hugo, Sanet; Van Rensburg, Berndt J.; Van Wyk, Abraham E.; Steenkamp, Yolande

2012-01-01

The distributions of naturalised alien plant species that have invaded natural or semi-natural habitat are often geographically restricted by the environmental conditions in their new range, implying that alien species with similar environmental requirements and tolerances may form assemblages and characterise particular areas. The aim of this study was to use objective numerical techniques to reveal any possible alien phytogeographic regions (i.e. geographic areas with characteristic alien plant assemblages) in southern Africa. Quarter degree resolution presence records of naturalised alien plant species of South Africa, Lesotho, Swaziland, Namibia and Botswana were analysed through a divisive hierarchical classification technique, and the output was plotted on maps for further interpretation. The analyses revealed two main alien phytogeographic regions that could be subdivided into eight lower level phytogeographic regions. Along with knowledge of the environmental requirements of the characteristic species and supported by further statistical analyses, we hypothesised on the main drivers of alien phytogeographic regions, and suggest that environmental features such as climate and associated biomes were most important, followed by human activities that modify climatic and vegetation features, such as irrigation and agriculture. Most of the characteristic species are not currently well-known as invasive plant species, but many may have potential to become troublesome in the future. Considering the possibility of biotic homogenization, these findings have implications for predicting the characteristics of the plant assemblages of the future. However, the relatively low quality of the dataset necessitates further more in-depth studies with improved data before the findings could be directly beneficial for management. PMID:22574145

Widespread exposure of Noachian phyllosilicates in the Margaritifer region of Mars: Implications for paleohydrology and astrobiological detection

NASA Astrophysics Data System (ADS)

Thomas, Rebecca J.; Hynek, Brian M.; Osterloo, Mikki M.; Kierein-Young, Kathryn S.

2017-03-01

The best locations at which to detect evidence for early life on Mars are in materials formed in near-surface aqueous environments, particularly where this resulted in the deposition of minerals such as clays that are favorable to preservation of organics. The geological history of the Margaritifer region has resulted in exceptional potential to preserve such deposits and to render them discoverable. Due to its topographic setting at the interface between highlands and lowlands, Margaritifer was a major sink for water and sediments in the early, Noachian, period, potentially creating environments that were habitable and conducive to clay formation. Subsequently, during the Late Hesperian to Amazonian, the ancient surface was extensively disrupted in association with the formation of multiple chaos regions. This activity had the potential to expose any astrobiological evidence from the earlier period. We used orbital image, spectral and topographic data to investigate the extent and means of exposure of Noachian clay-bearing deposits across the region. We find that they are indeed exposed over a very wide area in Margaritifer and that their mineralogy is most consistent with clay formation in a low-energy near-neutral pH groundwater environment. We additionally find that evidence for subsequent acidic groundwater activity is absent, indicating that biosignature preservation in these units is favored, perhaps to a greater degree than for similar deposits in the surrounding region. Further, due to the intense Hesperian-Amazonian geologic activity here, early clay-bearing units are exposed to a greater degree than achievable in regions with more localized erosive mechanisms.

Highly conserved CDR3 region in circulating CD4+Vβ5+ T cells may be associated with cytotoxic activity in Chagas disease

PubMed Central

Menezes, C A S; Sullivan, A K; Falta, M T; Mack, D G; Freed, B M; Rocha, M O C; Gollob, K J; Fontenot, A P; Dutra, W O

2012-01-01

Human infection with Trypanosoma cruzi leads to Chagas disease, which presents as several different clinical conditions ranging from an asymptomatic form to a severe dilated cardiomyopathy. Several studies have demonstrated that T cells play a critical role in the development of cardiac pathology, as well as in immunoregulation during chronic disease. However, the mechanisms that drive protective or pathogenic T cell response are not known. We have shown that CD4+ T cells from chagasic patients preferentially express T cell receptor (TCR) β-chain variable region (Vβ) 5. The aim of this work was to determine whether T cells expressing this particular Vβ region displayed variable or restricted CDR3 sequences, as an indicator of the nature of the stimulus leading to the activation of these T cells in vivo. Additionally, we aimed to evaluate phenotypic characteristics of these cells that might be associated with pathology. CDR3 junctional region sequencing of Vβ5·1 expressing CD4+ T cells revealed the occurrence of a highly homologous CDR3 region with conserved TCR Jβ region usage among patients with cardiac, but not indeterminate, Chagas disease. Moreover, correlation analysis indicated that the frequency of CD4+Vβ5·1+ cells is associated with granzyme A expression, suggesting that these cells might display cytotoxic function. Together these results provide new insight into T cell recognition of antigens involved in Chagas disease and suggest that these cells may be implicated in the pathogenesis of chagasic cardiomyopathy. PMID:22774985

Corporate and philanthropic models of hospital governance: a taxonomic evaluation.

PubMed Central

Weiner, B J; Alexander, J A

1993-01-01

OBJECTIVE. We assess the theoretical integrity and practical utility of the corporate-philanthropic governance typology frequently invoked in debates about the appropriate form of governance for nonprofit hospitals operating in increasingly competitive health care environments. DATA SOURCES. Data were obtained from a 1985 national mailed survey of nonprofit hospitals conducted by the American Hospital Association (AHA) and the Hospital Research and Educational Trust (HRET). STUDY DESIGN. A sample 1,577 nonprofit community hospitals were selected for study. Representativeness was assessed by comparing the sample with the population of non-profit community hospitals on the dimensions of bed size, ownership type, urban-rural location, multihospital system membership, and census region. DATA COLLECTION. Measurement of governance types was based on hospital governance attributes conforming to those cited in the literature as distinguishing corporate from philanthropic models and classified into six central dimensions of governance: (1) size, (2) committee structure and activity, (3) board member selection, (4) board composition, (5) CEO power and influence, and (6) bylaws and activities. PRINCIPAL FINDINGS. Cluster analysis and ANCOVA indicated that hospital board forms adhered only partially to corporate and philanthropic governance models. Further, board forms varied systematically by specific organizational and environmental conditions. Boards exhibiting more corporate governance forms were more likely to be large, privately owned, urban, and operating in competitive markets than were hospitals showing more philanthropic governance forms. CONCLUSIONS. Findings suggest that the corporate-philanthropic governance distinction must be seen as an ideal rather than an actual depiction of hospital governance forms. Implications for health care governance are discussed. PMID:8344823

Identification of Multiple Loci Associated with Social Parasitism in Honeybees

PubMed Central

Pirk, Christian W.; Allsopp, Mike H.

2016-01-01

In colonies of the honeybee Apis mellifera, the queen is usually the only reproductive female, which produces new females (queens and workers) by laying fertilized eggs. However, in one subspecies of A. mellifera, known as the Cape bee (A. m. capensis), worker bees reproduce asexually by thelytoky, an abnormal form of meiosis where two daughter nucleii fuse to form single diploid eggs, which develop into females without being fertilized. The Cape bee also exhibits a suite of phenotypes that facilitate social parasitism whereby workers lay such eggs in foreign colonies so their offspring can exploit their resources. The genetic basis of this switch to social parasitism in the Cape bee is unknown. To address this, we compared genome variation in a sample of Cape bees with other African populations. We find genetic divergence between these populations to be very low on average but identify several regions of the genome with extreme differentiation. The regions are strongly enriched for signals of selection in Cape bees, indicating that increased levels of positive selection have produced the unique set of derived phenotypic traits in this subspecies. Genetic variation within these regions allows unambiguous genetic identification of Cape bees and likely underlies the genetic basis of social parasitism. The candidate loci include genes involved in ecdysteroid signaling and juvenile hormone and dopamine biosynthesis, which may regulate worker ovary activation and others whose products localize at the centrosome and are implicated in chromosomal segregation during meiosis. Functional analysis of these loci will yield insights into the processes of reproduction and chemical signaling in both parasitic and non-parasitic populations and advance understanding of the process of normal and atypical meiosis. PMID:27280405

Discovery of jarosite within the Mawrth Vallis region of Mars: Implications for the geologic history of the region

NASA Astrophysics Data System (ADS)

Farrand, William H.; Glotch, Timothy D.; Rice, James W.; Hurowitz, Joel A.; Swayze, Gregg A.

2009-12-01

Analysis of visible to near infrared reflectance data from the MRO CRISM hyperspectral imager has revealed the presence of an ovoid-shaped landform, approximately 3 by 5 km in size, within the layered terrains surrounding the Mawrth Vallis outflow channel. This feature has spectral absorption features consistent with the presence of the ferric sulfate mineral jarosite, specifically a K-bearing jarosite (KFe 3(SO 4) 2(OH) 6). Terrestrial jarosite is formed through the oxidation of iron sulfides in acidic environments or from basaltic precursor minerals with the addition of sulfur. Previously identified phyllosilicates in the Mawrth Vallis layered terrains include a basal sequence of layers containing Fe-Mg smectites and an upper set of layers of hydrated silica and aluminous phyllosilicates. In terms of its fine scale morphology revealed by MRO HiRISE imagery, the jarosite-bearing unit has fracture patterns very similar to that observed in Fe-Mg smectite-bearing layers, but unlike that observed in the Al-bearing phyllosilicate unit. The ovoid-shaped landform is situated in an east-west bowl-shaped depression superposed on a north sloping surface. Spectra of the ovoid-shaped jarosite-bearing landform also display an anomalously high 600 nm shoulder, which may be consistent with the presence of goethite and a 1.92 μm absorption which could indicate the presence of ferrihydrite. Goethite, jarosite, and ferrihydrite can be co-precipitated and/or form through transformation of schwertmannite, both processes generally occurring under low pH conditions (pH 2-4). To date, this location appears to be unique in the Mawrth Vallis region and could represent precipitation of jarosite in acidic, sulfur-rich ponded water during the waning stages of drying.

Seasonal change of topology and resilience of ecological networks in wetlandscapes

NASA Astrophysics Data System (ADS)

Bin, Kim; Park, Jeryang

2017-04-01

Wetlands distributed in a landscape provide various ecosystem services including habitat for flora and fauna, hydrologic controls, and biogeochemical processes. Hydrologic regime of each wetland at a given landscape varies by hydro-climatic and geological conditions as well as the bathymetry, forming a certain pattern in the wetland area distribution and spatial organization. However, its large-scale pattern also changes over time as this wetland complex is subject to stochastic hydro-climatic forcing in various temporal scales. Consequently, temporal variation in the spatial structure of wetlands inevitably affects the dispersal ability of species depending on those wetlands as habitat. Here, we numerically show (1) the spatiotemporal variation of wetlandscapes by forcing seasonally changing stochastic rainfall and (2) the corresponding ecological networks which either deterministically or stochastically forming the dispersal ranges. We selected four vernal pool regions with distinct climate conditions in California. The results indicate that the spatial structure of wetlands in a landscape by measuring the wetland area frequency distribution changes by seasonal hydro-climatic condition but eventually recovers to the initial state. However, the corresponding ecological networks, which the structure and function change by the change of distances between wetlands, and measured by degree distribution and network efficiency, may not recover to the initial state especially in the regions with high seasonal dryness index. Moreover, we observed that the changes in both the spatial structure of wetlands in a landscape and the corresponding ecological networks exhibit hysteresis over seasons. Our analysis indicates that the hydrologic and ecological resilience of a wetlandcape may be low in a dry region with seasonal hydro-climatic forcing. Implications of these results for modelling ecological networks depending on hydrologic systems especially for conservation purposes are discussed.

Identification of Multiple Loci Associated with Social Parasitism in Honeybees.

PubMed

Wallberg, Andreas; Pirk, Christian W; Allsopp, Mike H; Webster, Matthew T

2016-06-01

In colonies of the honeybee Apis mellifera, the queen is usually the only reproductive female, which produces new females (queens and workers) by laying fertilized eggs. However, in one subspecies of A. mellifera, known as the Cape bee (A. m. capensis), worker bees reproduce asexually by thelytoky, an abnormal form of meiosis where two daughter nucleii fuse to form single diploid eggs, which develop into females without being fertilized. The Cape bee also exhibits a suite of phenotypes that facilitate social parasitism whereby workers lay such eggs in foreign colonies so their offspring can exploit their resources. The genetic basis of this switch to social parasitism in the Cape bee is unknown. To address this, we compared genome variation in a sample of Cape bees with other African populations. We find genetic divergence between these populations to be very low on average but identify several regions of the genome with extreme differentiation. The regions are strongly enriched for signals of selection in Cape bees, indicating that increased levels of positive selection have produced the unique set of derived phenotypic traits in this subspecies. Genetic variation within these regions allows unambiguous genetic identification of Cape bees and likely underlies the genetic basis of social parasitism. The candidate loci include genes involved in ecdysteroid signaling and juvenile hormone and dopamine biosynthesis, which may regulate worker ovary activation and others whose products localize at the centrosome and are implicated in chromosomal segregation during meiosis. Functional analysis of these loci will yield insights into the processes of reproduction and chemical signaling in both parasitic and non-parasitic populations and advance understanding of the process of normal and atypical meiosis.

The Cygnus OB2 Star Forming Complex

NASA Astrophysics Data System (ADS)

Rybarczyk, Daniel R.; Bania, Thomas

2018-01-01

Almost all astrophysical systems—from planets to stars to supernovae to entire galaxies—are impacted by the process of star formation. The brightest, most massive stars (OB stars) form in hot young clusters called OB associations. Cygnus OB2 is an OB association containing over 160 OB stars, making it one of the largest in the Milky Way Galaxy. At a distance of less than 1.5 kpc, its proximity to the Sun makes it optimal for assessing the process of Galactic star formation and its implications for stellar evolution, Galactic structure, and Galactic chemical evolution. Using existing data sets, we derive comprehensive maps of the distribution of thermal continuum, atomic, and molecular emission from the interstellar gas in Cyg OB2. The thermal continuum emission stems from the plasma ionized by OB stars. The atomic gas is probed by emission from atomic hydrogen, HI, at 21 cm wavelength. The molecular gas is traced by emission from the CO molecule which is a proxy for molecular hydrogen, H2. We combine these atomic and molecular data to derive a map of the total proton column density distribution in Cyg OB2. We also analyze the velocity fields of the OB stars, the atomic and molecular hydrogen gas, and the HII regions' radio recombination emission. As expected, we find HII regions to be spatially coincident with zones of higher cloud density. Surrounding the greatest concentration of OB stars is a cavity in the radio continuum and CO emission. This results from shock waves produced by the combined action of the high HII region pressure and winds from the OB stars. Such a distribution implies that Cyg OB2 is old enough to have evolved to this state.

Discovery of jarosite within the Mawrth Vallis region of Mars: Implications for the geologic history of the region

USGS Publications Warehouse

Farrand, W. H.; Glotch, T.D.; Rice, J. W.; Hurowitz, J.A.; Swayze, G.A.

2009-01-01

Analysis of visible to near infrared reflectance data from the MRO CRISM hyperspectral imager has revealed the presence of an ovoid-shaped landform, approximately 3 by 5 km in size, within the layered terrains surrounding the Mawrth Vallis outflow channel. This feature has spectral absorption features consistent with the presence of the ferric sulfate mineral jarosite, specifically a K-bearing jarosite (KFe3(SO4)2(OH)6). Terrestrial jarosite is formed through the oxidation of iron sulfides in acidic environments or from basaltic precursor minerals with the addition of sulfur. Previously identified phyllosilicates in the Mawrth Vallis layered terrains include a basal sequence of layers containing Fe-Mg smectites and an upper set of layers of hydrated silica and aluminous phyllosilicates. In terms of its fine scale morphology revealed by MRO HiRISE imagery, the jarosite-bearing unit has fracture patterns very similar to that observed in Fe-Mg smectite-bearing layers, but unlike that observed in the Al-bearing phyllosilicate unit. The ovoid-shaped landform is situated in an east-west bowl-shaped depression superposed on a north sloping surface. Spectra of the ovoid-shaped jarosite-bearing landform also display an anomalously high 600 nm shoulder, which may be consistent with the presence of goethite and a 1.92 ??m absorption which could indicate the presence of ferrihydrite. Goethite, jarosite, and ferrihydrite can be co-precipitated and/or form through transformation of schwertmannite, both processes generally occurring under low pH conditions (pH 2-4). To date, this location appears to be unique in the Mawrth Vallis region and could represent precipitation of jarosite in acidic, sulfur-rich ponded water during the waning stages of drying. ?? 2009 Elsevier Inc. All rights reserved.

A Functional Cartography of Cognitive Systems

PubMed Central

Mattar, Marcelo G.; Cole, Michael W.; Thompson-Schill, Sharon L.; Bassett, Danielle S.

2015-01-01

One of the most remarkable features of the human brain is its ability to adapt rapidly and efficiently to external task demands. Novel and non-routine tasks, for example, are implemented faster than structural connections can be formed. The neural underpinnings of these dynamics are far from understood. Here we develop and apply novel methods in network science to quantify how patterns of functional connectivity between brain regions reconfigure as human subjects perform 64 different tasks. By applying dynamic community detection algorithms, we identify groups of brain regions that form putative functional communities, and we uncover changes in these groups across the 64-task battery. We summarize these reconfiguration patterns by quantifying the probability that two brain regions engage in the same network community (or putative functional module) across tasks. These tools enable us to demonstrate that classically defined cognitive systems—including visual, sensorimotor, auditory, default mode, fronto-parietal, cingulo-opercular and salience systems—engage dynamically in cohesive network communities across tasks. We define the network role that a cognitive system plays in these dynamics along the following two dimensions: (i) stability vs. flexibility and (ii) connected vs. isolated. The role of each system is therefore summarized by how stably that system is recruited over the 64 tasks, and how consistently that system interacts with other systems. Using this cartography, classically defined cognitive systems can be categorized as ephemeral integrators, stable loners, and anything in between. Our results provide a new conceptual framework for understanding the dynamic integration and recruitment of cognitive systems in enabling behavioral adaptability across both task and rest conditions. This work has important implications for understanding cognitive network reconfiguration during different task sets and its relationship to cognitive effort, individual variation in cognitive performance, and fatigue. PMID:26629847

River Intrusion in Karst Springs in Eogenetic Aquifers: Implications for Speleogenesis

NASA Astrophysics Data System (ADS)

Martin, J. B.; Gulley, J.; Screaton, E. J.

2008-12-01

Conceptual models of speleogenesis generally assume uni-directional transport in integrated conduit systems from discrete recharge points to discharge at karst springs. Estavelles, however, are karst springs that function intermittently as discrete recharge points when river stage rises more rapidly than local aquifer heads. As river water chemistry changes between baseflow and floods, estavelles should influence mass transport through (e.g. organic carbon, nutrients, and oxygen) and speleogenesis within karst systems. Estavelles are common in our study area in north-central Florida, particularly along the lower reaches of the Santa Fe River, where it flows across the unconfined karstic Floridan aquifer. River stage in this unconfined region can rise much faster than aquifer heads when large amounts of rain fall on the confined regions in its upper reaches. Backflooding into the estavelles during elevated river stage drives river water into the ground, causing some springs to reverse and other springs to recirculate large volumes of river water. Floodwaters originating in the confined region are highly undersaturated with respect to calcite, and thus river water transitions from slightly supersaturated to highly undersaturated with respect to calcite during flood events. As a result, conduits connected to estavelles are continuously enlarged as springs reverse or recirculate calcite-undersaturated river water. It has been suggested that currently flooded caves (i.e. karst conduits) associated with springs in Florida formed entirely underwater because speleothems, which are prevalent in flooded caves in the Yucatan and Bahamas, have not been observed by cave divers. Results of this study indicate that the absence of speleothems does not necessarily provide evidence of a continuous phreatic history for underwater caves. Instead speleothems that formed in caves while dry could have been dissolved by backflooding of estavelles with undersaturated water

Architecture of the human renal inner medulla and functional implications.

PubMed

Wei, Guojun; Rosen, Seymour; Dantzler, William H; Pannabecker, Thomas L

2015-10-01

The architecture of the inner stripe of the outer medulla of the human kidney has long been known to exhibit distinctive configurations; however, inner medullary architecture remains poorly defined. Using immunohistochemistry with segment-specific antibodies for membrane fluid and solute transporters and other proteins, we identified a number of distinctive functional features of human inner medulla. In the outer inner medulla, aquaporin-1 (AQP1)-positive long-loop descending thin limbs (DTLs) lie alongside descending and ascending vasa recta (DVR, AVR) within vascular bundles. These vascular bundles are continuations of outer medullary vascular bundles. Bundles containing DTLs and vasa recta lie at the margins of coalescing collecting duct (CD) clusters, thereby forming two regions, the vascular bundle region and the CD cluster region. Although AQP1 and urea transporter UT-B are abundantly expressed in long-loop DTLs and DVR, respectively, their expression declines with depth below the outer medulla. Transcellular water and urea fluxes likely decline in these segments at progressively deeper levels. Smooth muscle myosin heavy chain protein is also expressed in DVR of the inner stripe and the upper inner medulla, but is sparsely expressed at deeper inner medullary levels. In rodent inner medulla, fenestrated capillaries abut CDs along their entire length, paralleling ascending thin limbs (ATLs), forming distinct compartments (interstitial nodal spaces; INSs); however, in humans this architecture rarely occurs. Thus INSs are relatively infrequent in the human inner medulla, unlike in the rodent where they are abundant. UT-B is expressed within the papillary epithelium of the lower inner medulla, indicating a transcellular pathway for urea across this epithelium. Copyright © 2015 the American Physiological Society.

Cranial architecture of tube-snouted gasterosteiformes (Syngnathus rostellatus and Hippocampus capensis).

PubMed

Leysen, Heleen; Jouk, Philippe; Brunain, Marleen; Christiaens, Joachim; Adriaens, Dominique

2010-03-01

The long snout of pipefishes and seahorses (Syngnathidae, Gasterosteiformes) is formed as an elongation of the ethmoid region. This is in contrast to many other teleosts with elongate snouts (e.g., butterflyfishes) in which the snout is formed as an extension of the jaws. Syngnathid fishes perform very fast suction feeding, accomplished by powerful neurocranial elevation and hyoid retraction. Clearly, suction through a long and narrow tube and its hydrodynamic implications can be expected to require certain adaptations in the cranium, especially in musculoskeletal elements of the feeding apparatus. Not much is known about which skeletal elements actually support the snout and what the effect of elongation is on related structures. Here, we give a detailed morphological description of the cartilaginous and bony feeding apparatus in both juvenile and adult Syngnathus rostellatus and Hippocampus capensis. Our results are compared with previous morphological studies of a generalized teleost, Gasterosteus aculeatus. We found that the ethmoid region is elongated early during development, with the ethmoid plate, the hyosymplectic, and the basihyal cartilage being extended in the chondrocranium. In the juveniles of both species almost all bones are forming, although only as a very thin layer. The elongation of the vomeral, mesethmoid, quadrate, metapterygoid, symplectic, and preopercular bones is already present. Probably, because of the long and specialized parental care which releases advanced developmental stages from the brooding pouch, morphology of the feeding apparatus of juveniles is already very similar to that of the adults. We describe morphological features related to snout elongation that may be considered adaptations for suction feeding; e.g. the peculiar shape of the interhyal bone and its saddle-shaped articulation with the posterior ceratohyal bone might aid in explosive hyoid retraction by reducing the risk of hyoid dislocation.

Late Jurassic rhyolites from the Wuchagou region in the central Great Xing'an Range, NE China: Petrogenesis and tectonic implications

NASA Astrophysics Data System (ADS)

Ji, Zheng; Ge, Wen-Chun; Yang, Hao; Wang, Qing-hai; Zhang, Yan-long; Wang, Zhi-hui; Bi, Jun-Hui

2018-06-01

We report geochronological, whole-rock geochemical, and zircon Hf isotopic data for Late Jurassic rhyolites in the central Great Xing'an Range of northeastern China, to determine their petrogenesis, source, and tectonic setting. Laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) zircon U-Pb ages indicate that the rhyolites previously mapped as the lower Permian Dashizhai Formation in the Wuchagou region formed during the Late Jurassic (162-154 Ma). Geochemically, these rhyolites belong to the mid- to high-K calc-alkaline series and show peraluminous characteristics and consistent correlations between major elements and SiO2. They are characterized by enrichments in large ion lithophile elements (LILEs; e.g., Rb and K) and light rare earth elements (LREEs), and depletions in high field strength elements (HFSEs; e.g., Nb, Ta, and Ti) and heavy rare earth elements (HREEs). In situ Hf isotopic analyses of zircons from the rhyolites reveal relatively homogeneous Hf isotopic compositions, with εHf(t) values of +4.84 to +9.44, and two-stage model ages of 606-895 Ma. Based on their eruption ages, geochemical characteristics, and Hf isotopic compositions, we conclude that the magmas that formed the Late Jurassic rhyolites were produced during partial melting of a Neoproterozoic quartz-bearing amphibolite-facies mafic crust. These magmas subsequently underwent extensive fractional crystallization of plagioclase, hornblende, Ti-bearing phases, monazite, and apatite. Combined with previous data, our results demonstrate that the Late Jurassic volcanic rocks in the Great Xing'an Range were formed in a post-collisional extensional setting. The gravitational collapse of the orogenically thickened crust was caused by break-off of the subducted oceanic slab and upwelling of asthenosphere after closure of the Mongol-Okhotsk Ocean.

Evidence of yttrium silicate inclusions in YSZ-porcelain veneers.

PubMed

Stoner, Brian R; Griggs, Jason A; Neidigh, John; Piascik, Jeffrey R

2014-04-01

This report introduces the discovery of crystalline defects that can form in the porcelain veneering layer when in contact with yttria-stabilized zirconia (YSZ). The focus was on dental prostheses and understanding the defects that form in the YSZ/porcelain system; however the data reported herein may have broader implications toward the use and stability of YSZ-based ceramics in general. Specimens were cut from fully sintered YSZ plates and veneering porcelain was applied (<1 mm thick) to one surface and fired under manufacturer's recommended protocol. Scanning electron microscopy (SEM) with integrated electron dispersive X-ray (EDAX) was used for microstructural and elemental analysis. EDAX, for chemical analysis and transmission electron diffraction (TED) for structural analysis were both performed in the transmission electron microscope (TEM). Additionally, in order to spatially resolve Y-rich precipitates, micro-CT scans were conducted at varying depths within the porcelain veneer. Local EDAX (SEM) was performed in the regions of visible inclusions and showed significant increases in yttrium concentration. TEM specimens also showed apparent inclusions in the porcelain and selected area electron diffraction was performed on these regions and found the inclusions to be crystalline and identified as either yttrium-silicate (Y2 SiO5 ) or yttrium-disilicate (Y2 Si2 O7 ). Micro-CT data showed that yttrium-silicate precipitates were distributed throughout the thickness of the porcelain veneer. Future studies are needed to determine whether many of the premature failures associated with this materials system may be the result of crystalline flaws that form as a result of high temperature yttrium diffusion near the surfaces of YSZ. © 2013 Wiley Periodicals, Inc.

Structural control on arc volcanism: The Caviahue Copahue complex, Central to Patagonian Andes transition (38°S)

NASA Astrophysics Data System (ADS)

Melnick, Daniel; Folguera, Andrés; Ramos, Victor A.

2006-11-01

This paper describes the volcanostratigraphy, structure, and tectonic implications of an arc volcanic complex in an oblique subduction setting: the Caviahue caldera Copahue volcano (CAC) of the Andean margin. The CAC is located in a first-order morphotectonic transitional zone, between the low and narrow Patagonian and the high and broad Central Andes. The evolution of the CAC started at approximately 4-3 Ma with the opening of the 20 × 15 km Caviahue pull-apart caldera; Las Mellizas volcano formed inside the caldera and collapsed at approximately 2.6 Ma; and the Copahue volcano evolved in three stages: (1) 1.2-0.7 Ma formed the approximately 1 km thick andesitic edifice, (2) 0.7-0.01 Ma erupted andesitic-dacitic subglacial pillow lavas, and (3) 0.01-0 Ma erupted basaltic-andesites and pyroclastic flows from fissures, aligned cones, and summit craters. Magma ascent has occurred along planes perpendicular to the least principal horizontal stress, whereas hydrothermal activity and hot springs also occur along parallel planes. At a regional scale, Quaternary volcanism concentrates along the NE-trending, 90 km long Callaqui-Copahue-Mandolegüe lineament, the longest of the southern volcanic zone, which is here interpreted as an inherited crustal-scale transfer zone from a Miocene rift basin. At a local scale within the CAC, effusions are controlled by local structures that formed at the intersection of regional fault systems. The Central to Patagonian Andes transition occurs at the Callaqui-Copahue-Mandolegüe lineament, which decouples active deformation from the intra-arc strike-slip Liquiñe-Ofqui fault zone to the south and the backarc Copahue-Antiñir thrust system.

A reduced-form approach for representing the impacts of wind and solar PV deployment on the structure and operation of the electricity system

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Nils; Strubegger, Manfred; McPherson, Madeleine

In many climate change mitigation scenarios, integrated assessment models of the energy and climate systems rely heavily on renewable energy technologies with variable and uncertain generation, such as wind and solar PV, to achieve substantial decarbonization of the electricity sector. However, these models often include very little temporal resolution and thus have difficulty in representing the integration costs that arise from mismatches between electricity supply and demand. The global integrated assessment model, MESSAGE, has been updated to explicitly model the trade-offs between variable renewable energy (VRE) deployment and its impacts on the electricity system, including the implications for electricity curtailment,more » backup capacity, and system flexibility. These impacts have been parameterized using a reduced-form approach, which allows VRE integration impacts to be quantified on a regional basis. In addition, thermoelectric technologies were updated to include two modes of operation, baseload and flexible, to better account for the cost, efficiency, and availability penalties associated with flexible operation. In this paper, the modeling approach used in MESSAGE is explained and the implications for VRE deployment in mitigation scenarios are assessed. Three important stylized facts associated with integrating high VRE shares are successfully reproduced by our modeling approach: (1) the significant reduction in the utilization of non-VRE power plants; (2) the diminishing role for traditional baseload generators, such as nuclear and coal, and the transition to more flexible technologies; and (3) the importance of electricity storage and hydrogen electrolysis in facilitating the deployment of VRE.« less

The Valley Networks on Mars

NASA Astrophysics Data System (ADS)

Gulick, V. C.

2002-12-01

Despite three decades of exploration, the valley networks on Mars still seem to raise more questions than they answer. Valley systems have formed in the southern highlands, along some regions of the dichotomy boundary and the south rim of Valles Marineris, around the rim of some impact craters, and on the flanks of some volcanoes. They are found on some of the oldest and youngest terrains as well as on intermediate aged surfaces. There is surprisingly little consensus as to the formation and the paleoclimatic implications of the valley networks. Did the valleys require a persistent solar-driven atmospheric hydrological cycle involving precipitation, surface runoff, infiltration and groundwater outflow as they typically do on Earth? Or are they the result of magmatic or impact-driven thermal cycling of ground water involving persistent outflow and subsequent runoff? Are they the result of some other process(es)? Ground-water sapping, surface-water runoff, debris flows, wind erosion, and formation mechanisms involving other fluids have been proposed. Until such basic questions as these are definitively answered, their significance for understanding paleoclimatic change on Mars remains cloudy. I will review what is known about valley networks using data from both past and current missions. I will discuss what we have learned about their morphology, environments in which they formed, their spatial and temporal associations, possible formation mechanisms, relation to outflow channel and gully formation, as well as the possible implications for past climate change on Mars. Finally I will discuss how future, meter to submeter scale imaging and other remote sensing observations may shed new light on the debate over the origin of these enigmatic features.

Literacy and Locality.

ERIC Educational Resources Information Center

Davis, Ken, Ed.

1986-01-01

Noting that despite the homogenizing influence of the mass media, the United States remains a land of regions, this focused journal issue celebrates regionalism (especially Kentucky regionalism) by exploring its implications for the teaching of English and language arts. The articles and their authors are as follows: (1) "Literacy and…

Introduction to an Updated Analysis of Planetary Protection: "Special Regions" on Mars

NASA Astrophysics Data System (ADS)

Beaty, D. W.; Rummel, J. D.; Viola, D.

2014-03-01

Since the beginning of human activity in space science and exploration, there has been an appreciation of the negative consequences of transferring life from one planet to another. Given the unknown consequences of contact between two life forms and the fundamental value of studying a new form life, thoughtfulness and caution are warranted. The "special regions" concept is a component of the International Council for Science's Committee on Space Research (COSPAR) Planetary Protection Policy, as it applies to Mars. These are regions "within which terrestrial organisms are likely to replicate" as well as "any region which is interpreted to have a high potential for the existence of extant martian life." Robotic missions planning to have direct contact with such special regions are given planetary protection categorization (IVc), with stringent cleanliness constraints on the portions of the mission contacting such regions. The current, quantitative definition of "special regions based on temperature and water activity limits was adopted by COSPAR in 2008 after a two-year process that included meetings of the Mars Exploration Planning and Analysis Group's (MEPAG) Special Regions Science Analysis Group (SR-SAG) and COSPAR's Panel on Planetary Protection. In this study, the MEPAG SR-SAG2 will review and update the technical information that underlie NASA's and COSPAR's definition of special regions on Mars, enabling interpretations of when and where they could occur in light of new discoveries since 2007. This will include updates of current understanding in (1) the known physical limits to life on Earth, including low temperature and low water activity, the biological capture/use of vapor-phase water, and survival over long time scales with short periods of growth; (2) observational data sets and new models from Mars that could be relevant to our understanding of the natural variations on Mars of water activity and temperature, including recurring slope lineae (RSL), gullies, the distribution of surface and subsurface ice, brine stability, and atmosphere-regolith interactions; and (3) mineral and amorphous material water content and its potential biological availability, including mineral deliquescence. This information will be used to reconsider the parameters used to define the term "special region," including the temperature and water activity thresholds, timescales for the existence of a special region (episodic or continuous), and the spatial scale used to apply "special" or "non-special" designations. Additionally, both text and map forms will be prepared, describing Mars environments that are judged to be "special" or for which there is a significant (but still unknown) probability that the threshold conditions for a special region would be exceeded within the assumed 500-year limit. A preliminary analysis of the kinds and amounts of water-related resources on Mars of potential interest to the eventual human exploration of Mars will also be performed, and the planetary protection implications of attempting to access/exploit them will be evaluated. Members of the community who have information on any of these topics are encouraged to contact one of the authors of this abstract.

The ubiquity of energy-dense snack foods: a national multicity study.

PubMed

Farley, Thomas A; Baker, Erin T; Futrell, Lauren; Rice, Janet C

2010-02-01

We assessed the availability and accessibility of energy-dense snacks in retail stores whose primary merchandise was not food and whether these varied by store type, region, or socioeconomic factors. We conducted systematic observations of 1082 retail stores in 19 US cities and determined the availability and accessibility of 6 categories of energy-dense snack foods. Snack food was available in 41% of the stores; the most common forms were candy (33%), sweetened beverages (20%), and salty snacks (17%). These foods were often within arm's reach of the cash register queue. We observed snack foods in 96% of pharmacies, 94% of gasoline stations, 22% of furniture stores, 16% of apparel stores, and 29% to 65% of other types of stores. Availability varied somewhat by region but not by the racial or socioeconomic characteristics of nearby census tracts. Energy-dense snack foods and beverages, implicated as contributors to the obesity epidemic, are widely available in retail stores whose primary business is not food. The ubiquity of these products may contribute to excess energy consumption in the United States.

Cadmium-cysteine coordination in the BK inner pore region and its structural and functional implications.

PubMed

Zhou, Yu; Xia, Xiao-Ming; Lingle, Christopher J

2015-04-21

To probe structure and gating-associated conformational changes in BK-type potassium (BK) channels, we examined consequences of Cd(2+) coordination with cysteines introduced at two positions in the BK inner pore. At V319C, the equivalent of valine in the conserved Kv proline-valine-proline (PVP) motif, Cd(2+) forms intrasubunit coordination with a native glutamate E321, which would place the side chains of V319C and E321 much closer together than observed in voltage-dependent K(+) (Kv) channel structures, requiring that the proline between V319C and E321 introduces a kink in the BK S6 inner helix sharper than that observed in Kv channel structures. At inner pore position A316C, Cd(2+) binds with modest state dependence, suggesting the absence of an ion permeation gate at the cytosolic side of BK channel. These results highlight fundamental structural differences between BK and Kv channels in their inner pore region, which likely underlie differences in voltage-dependent gating between these channels.

Missing mass or missing light?

NASA Astrophysics Data System (ADS)

Davies, J. I.

1990-07-01

Disney et al. (1989) have argued that the observational data are consistent with disk galaxies being optically thick, particularly in their inner regions. Here, these results are used to reinterpret the radial surface-brightness distributions of spiral galaxies. It is found that the fitting of a profile with an absorbed disk plus bulge leads to both disk and bulge masses (mass in luminous material) that are larger than previously assumed. In addition, it is shown how the rotation velocity, as determined from optical data in the central regions, may systematically underestimate the true rotational velocity in an optically thick disk. If the bulges of late-type galaxies are as large as is hypothesized, then this has important implications in models of galaxy evolution and galaxy dynamics. The model greatly reduces or even eliminates the need for dark matter within the optical radius; it removes a major argument against S0 evolution from later-type galaxies; it accounts for the similarity of rotation curve forms among galaxies of different morphological types; and it leads to a further reappraisal of the observed constancy of the extrapolated central surface brightness of galactic disks.

Intrusive Images in Psychological Disorders

PubMed Central

Brewin, Chris R.; Gregory, James D.; Lipton, Michelle; Burgess, Neil

2010-01-01

Involuntary images and visual memories are prominent in many types of psychopathology. Patients with posttraumatic stress disorder, other anxiety disorders, depression, eating disorders, and psychosis frequently report repeated visual intrusions corresponding to a small number of real or imaginary events, usually extremely vivid, detailed, and with highly distressing content. Both memory and imagery appear to rely on common networks involving medial prefrontal regions, posterior regions in the medial and lateral parietal cortices, the lateral temporal cortex, and the medial temporal lobe. Evidence from cognitive psychology and neuroscience implies distinct neural bases to abstract, flexible, contextualized representations (C-reps) and to inflexible, sensory-bound representations (S-reps). We revise our previous dual representation theory of posttraumatic stress disorder to place it within a neural systems model of healthy memory and imagery. The revised model is used to explain how the different types of distressing visual intrusions associated with clinical disorders arise, in terms of the need for correct interaction between the neural systems supporting S-reps and C-reps via visuospatial working memory. Finally, we discuss the treatment implications of the new model and relate it to existing forms of psychological therapy. PMID:20063969

Basin-scale heterogeneity in Antarctic precipitation and its impact on surface mass variability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fyke, Jeremy; Lenaerts, Jan T. M.; Wang, Hailong

Annually averaged precipitation in the form of snow, the dominant term of the Antarctic Ice Sheet surface mass balance, displays large spatial and temporal variability. Here we present an analysis of spatial patterns of regional Antarctic precipitation variability and their impact on integrated Antarctic surface mass balance variability simulated as part of a preindustrial 1800-year global, fully coupled Community Earth System Model simulation. Correlation and composite analyses based on this output allow for a robust exploration of Antarctic precipitation variability. We identify statistically significant relationships between precipitation patterns across Antarctica that are corroborated by climate reanalyses, regional modeling and icemore » core records. These patterns are driven by variability in large-scale atmospheric moisture transport, which itself is characterized by decadal- to centennial-scale oscillations around the long-term mean. We suggest that this heterogeneity in Antarctic precipitation variability has a dampening effect on overall Antarctic surface mass balance variability, with implications for regulation of Antarctic-sourced sea level variability, detection of an emergent anthropogenic signal in Antarctic mass trends and identification of Antarctic mass loss accelerations.« less

Morphological structure in the Arabic mental lexicon: Parallels between standard and dialectal Arabic

PubMed Central

Boudelaa, Sami; Marslen-Wilson, William D.

2012-01-01

The Arabic language is acquired by its native speakers both as a regional spoken Arabic dialect, acquired in early childhood as a first language, and as the more formal variety known as Modern Standard Arabic (MSA), typically acquired later in childhood. These varieties of Arabic show a range of linguistic similarities and differences. Since previous psycholinguistic research in Arabic has primarily used MSA, it remains to be established whether the same cognitive properties hold for the dialects. Here we focus on the morphological level, and ask whether roots and word patterns play similar or different roles in MSA and in the regional dialect known as Southern Tunisian Arabic (STA). In two intra-modal auditory-auditory priming experiments, we found similar results with strong priming effects for roots and patterns in both varieties. Despite differences in the timing and nature of the acquisition of MSA and STA, root and word pattern priming was clearly distinguishable from form-based and semantic-based priming in both varieties. The implication of these results for theories of Arabic diglossia and theories of morphological processing are discussed. PMID:24347753

Synucleins: are they two-edged swords?

PubMed

Surguchov, Andrei

2013-02-01

The synuclein family consists of three distinct highly homologous genes, α-synuclein, β-synuclein, and γ-synuclein, which have so far been found only in vertebrates. Proteins encoded by these genes are characterized by an acidic C-terminal region and five or six imperfect repeat motifs (KTKEGV) distributed throughout the highly conserved N-terminal region. Numerous data demonstrate that synucleins are implicated in two groups of the most devastating human disorders, i.e., neurodegenerative diseases (NDDs) and cancer. Mutations in the α-synuclein gene are associated with familial forms of Parkinson's disease (PD), and accumulation of α-synuclein inclusions is a hallmark of this disorder. In breast cancer, increased expression of γ-synuclein correlates with disease progression. Conversely, some results indicate that the members of the synuclein family may have a protective effect. How might these small proteins combine such controversial properties? We present evidence that synuclein's features are basically regulated by two mechanisms, i.e., posttranslational modifications (PTMs) and the level of their expression. We also discuss a new, emerging area of investigation of synucleins, namely, their role in the cell-to-cell propagation of pathology. Copyright © 2012 Wiley Periodicals, Inc.

Basin-scale heterogeneity in Antarctic precipitation and its impact on surface mass variability

DOE PAGES

Fyke, Jeremy; Lenaerts, Jan T. M.; Wang, Hailong

2017-11-15

Annually averaged precipitation in the form of snow, the dominant term of the Antarctic Ice Sheet surface mass balance, displays large spatial and temporal variability. Here we present an analysis of spatial patterns of regional Antarctic precipitation variability and their impact on integrated Antarctic surface mass balance variability simulated as part of a preindustrial 1800-year global, fully coupled Community Earth System Model simulation. Correlation and composite analyses based on this output allow for a robust exploration of Antarctic precipitation variability. We identify statistically significant relationships between precipitation patterns across Antarctica that are corroborated by climate reanalyses, regional modeling and icemore » core records. These patterns are driven by variability in large-scale atmospheric moisture transport, which itself is characterized by decadal- to centennial-scale oscillations around the long-term mean. We suggest that this heterogeneity in Antarctic precipitation variability has a dampening effect on overall Antarctic surface mass balance variability, with implications for regulation of Antarctic-sourced sea level variability, detection of an emergent anthropogenic signal in Antarctic mass trends and identification of Antarctic mass loss accelerations.« less

VNTR alleles associated with the {alpha}-globin locus are haplotype and population related

DOE Office of Scientific and Technical Information (OSTI.GOV)

Martinson, J.J.; Clegg, J.B.; Boyce, A.J.

1994-09-01

The human {alpha}-globin complex contains several polymorphic restriction-enzyme sites (i.e., RFLPs) linked to form haplotypes and is flanked by two hypervariable VNTR loci, the 5{prime} hypervariable region (HVR) and the more highly polymorphic 3{prime}HVR. Using a combination of RFLP analysis and PCR, the authors have characterized the 5{prime}HVR and 3{prime}HVR alleles associated with the {alpha}-globin haplotypes of 133 chromosomes, and they here show that specific {alpha}-globin haplotypes are each associated with discrete subsets of the alleles observed at these two VNTR loci. This statistically highly significant association is observed over a region spanning {approximately} 100 kb. With the exception ofmore » closely related haplotypes, different haplotypes do not share identically sized 3{prime}HVR alleles. Earlier studies have shown that {alpha}-globin haplotype distributions differ between populations; the current findings also reveal extensive population substructure in the repertoire of {alpha}-globin VNTRs. If similar features are characteristic of other VNTR loci, this will have important implications for forensic and anthropological studies. 42 refs., 5 figs., 5 tabs.« less

The Ubiquity of Energy-Dense Snack Foods: A National Multicity Study

PubMed Central

Farley, Thomas A.; Baker, Erin T.; Rice, Janet C.

2010-01-01

Objectives. We assessed the availability and accessibility of energy-dense snacks in retail stores whose primary merchandise was not food and whether these varied by store type, region, or socioeconomic factors. Methods. We conducted systematic observations of 1082 retail stores in 19 US cities and determined the availability and accessibility of 6 categories of energy-dense snack foods. Results. Snack food was available in 41% of the stores; the most common forms were candy (33%), sweetened beverages (20%), and salty snacks (17%). These foods were often within arm's reach of the cash register queue. We observed snack foods in 96% of pharmacies, 94% of gasoline stations, 22% of furniture stores, 16% of apparel stores, and 29% to 65% of other types of stores. Availability varied somewhat by region but not by the racial or socioeconomic characteristics of nearby census tracts. Conclusions. Energy-dense snack foods and beverages, implicated as contributors to the obesity epidemic, are widely available in retail stores whose primary business is not food. The ubiquity of these products may contribute to excess energy consumption in the United States. PMID:20019297

A Bayesian network approach to knowledge integration and representation of farm irrigation: 1. Model development

NASA Astrophysics Data System (ADS)

Wang, Q. J.; Robertson, D. E.; Haines, C. L.

2009-02-01

Irrigation is important to many agricultural businesses but also has implications for catchment health. A considerable body of knowledge exists on how irrigation management affects farm business and catchment health. However, this knowledge is fragmentary; is available in many forms such as qualitative and quantitative; is dispersed in scientific literature, technical reports, and the minds of individuals; and is of varying degrees of certainty. Bayesian networks allow the integration of dispersed knowledge into quantitative systems models. This study describes the development, validation, and application of a Bayesian network model of farm irrigation in the Shepparton Irrigation Region of northern Victoria, Australia. In this first paper we describe the process used to integrate a range of sources of knowledge to develop a model of farm irrigation. We describe the principal model components and summarize the reaction to the model and its development process by local stakeholders. Subsequent papers in this series describe model validation and the application of the model to assess the regional impact of historical and future management intervention.

Method of forming contacts for a back-contact solar cell

DOEpatents

Manning, Jane

2015-10-20

Methods of forming contacts for solar cells are described. In one embodiment, a method includes forming a silicon layer above a substrate, forming and patterning a solid-state p-type dopant source on the silicon layer, forming an n-type dopant source layer over exposed regions of the silicon layer and over a plurality of regions of the solid-state p-type dopant source, and heating the substrate to provide a plurality of n-type doped silicon regions among a plurality of p-type doped silicon regions.

Method of forming contacts for a back-contact solar cell

DOEpatents

Manning, Jane

2014-07-15

Methods of forming contacts for solar cells are described. In one embodiment, a method includes forming a silicon layer above a substrate, forming and patterning a solid-state p-type dopant source on the silicon layer, forming an n-type dopant source layer over exposed regions of the silicon layer and over a plurality of regions of the solid-state p-type dopant source, and heating the substrate to provide a plurality of n-type doped silicon regions among a plurality of p-type doped silicon regions.

Understanding global climate change scenarios through bioclimate stratification

NASA Astrophysics Data System (ADS)

Soteriades, A. D.; Murray-Rust, D.; Trabucco, A.; Metzger, M. J.

2017-08-01

Despite progress in impact modelling, communicating and understanding the implications of climatic change projections is challenging due to inherent complexity and a cascade of uncertainty. In this letter, we present an alternative representation of global climate change projections based on shifts in 125 multivariate strata characterized by relatively homogeneous climate. These strata form climate analogues that help in the interpretation of climate change impacts. A Random Forests classifier was calculated and applied to 63 Coupled Model Intercomparison Project Phase 5 climate scenarios at 5 arcmin resolution. Results demonstrate how shifting bioclimate strata can summarize future environmental changes and form a middle ground, conveniently integrating current knowledge of climate change impact with the interpretation advantages of categorical data but with a level of detail that resembles a continuous surface at global and regional scales. Both the agreement in major change and differences between climate change projections are visually combined, facilitating the interpretation of complex uncertainty. By making the data and the classifier available we provide a climate service that helps facilitate communication and provide new insight into the consequences of climate change.

Model of music cognition and amusia.

PubMed

García-Casares, N; Berthier Torres, M L; Froudist Walsh, S; González-Santos, P

2013-04-01

The study of the neural networks involved in music processing has received less attention than work researching the brain's language networks. For the last two decades there has been a growing interest in discovering the functional mechanisms of the musical brain and understanding those disorders in which brain regions linked with perception and production of music are damaged. Congenital and acquired musical deficits in their various forms (perception, execution, music-memory) are grouped together under the generic term amusia. In this selective review we present the "cutting edge" studies on the cognitive and neural processes implicated in music and the various forms of amusia. Musical processing requires a large cortico-subcortical network which is distributed throughout both cerebral hemispheres and the cerebellum. The analysis of healthy subjects using functional neuroimaging and examination of selective deficits (e.g., tone, rhythm, timbre, melodic contours) in patients will improve our knowledge of the mechanisms involved in musical processing and the latter's relationship with other cognitive processes. Copyright © 2011 Sociedad Española de Neurología. Published by Elsevier Espana. All rights reserved.

Trimeric structure of (+)-pinoresinol-forming dirigent protein at 1.95 Å resolution with three isolated active sites.

PubMed

Kim, Kye-Won; Smith, Clyde A; Daily, Michael D; Cort, John R; Davin, Laurence B; Lewis, Norman G

2015-01-16

Control over phenoxy radical-radical coupling reactions in vivo in vascular plants was enigmatic until our discovery of dirigent proteins (DPs, from the Latin dirigere, to guide or align). The first three-dimensional structure of a DP ((+)-pinoresinol-forming DP, 1.95 Å resolution, rhombohedral space group H32)) is reported herein. It has a tightly packed trimeric structure with an eight-stranded β-barrel topology for each DP monomer. Each putative substrate binding and orientation coupling site is located on the trimer surface but too far apart for intermolecular coupling between sites. It is proposed that each site enables stereoselective coupling (using either two coniferyl alcohol radicals or a radical and a monolignol). Interestingly, there are six differentially conserved residues in DPs affording either the (+)- or (-)-antipodes in the vicinity of the putative binding site and region known to control stereoselectivity. DPs are involved in lignan biosynthesis, whereas dirigent domains/sites have been implicated in lignin deposition. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Land use, macroalgae, and a tumor-forming disease in marine turtles.

PubMed

Van Houtan, Kyle S; Hargrove, Stacy K; Balazs, George H

2010-09-29

Wildlife diseases are an increasing concern for endangered species conservation, but their occurrence, causes, and human influences are often unknown. We analyzed 3,939 records of stranded Hawaiian green sea turtles (Chelonia mydas) over 28 years to understand fibropapillomatosis, a tumor-forming disease linked to a herpesvirus. Turtle size is a consistent risk factor and size-standardized models revealed considerable spatial and temporal variability. The disease peaked in some areas in the 1990s, in some regions rates remained constant, and elsewhere rates increased. Land use, onshore of where the turtles feed, may play a role. Elevated disease rates were clustered in watersheds with high nitrogen-footprints; an index of natural and anthropogenic factors that affect coastal eutrophication. Further analysis shows strong epidemiological links between disease rates, nitrogen-footprints, and invasive macroalgae and points to foraging ecology. These turtles now forage on invasive macroalgae, which can dominate nutrient rich waters and sequester environmental N in the amino acid arginine. Arginine is known to regulate immune activity, promote herpesviruses, and contribute to tumor formation. Our results have implications for understanding diseases in aquatic organisms, eutrophication, herpesviruses, and tumor formation.

Chromosomal characterization of Arvicanthis species (Rodentia, Murinae) from western and central Africa: implications for taxonomy.

PubMed

Volobouev, V T; Ducroz, J F; Aniskin, V M; Britton-Davidian, J; Castiglia, R; Dobigny, G; Granjon, L; Lombard, M; Corti, M; Sicard, B; Capanna, E

2002-01-01

A chromosome study of unstriped grass rats of the genus Arvicanthis (Rodentia, Murinae) in western and central Africa is presented. The observations extend the data available to 242 specimens from 59 localities. All individuals karyotyped belong to four karyotypic forms, or cytotypes, earlier described as ANI-1, ANI-2, ANI-3, and ANI-4 and are presumed to correspond to four distinct species. In order to provide diagnostic characters for these western and one central African Arvicanthis species, we standardized the chromosomal data available and developed a G- and C-banded chromosome nomenclature that allows easy species identification. Each form is characterized by a distinct geographical distribution, roughly following the biogeographical domains of western Africa, although their precise limits remain to be assessed. The sole area of sympatry detected is the region of the inner delta of the Niger River, where both ANI-1 and ANI-3 can be found. It is proposed that the three western African species ANI-1, ANI-3, and ANI-4 be renamed as A. niloticus, A. ansorgei, and A. rufinus, respectively. Copyright 2002 S. Karger AG, Basel

Analysis of Rotation and Transport Data in C-Mod ITB Plasmas

NASA Astrophysics Data System (ADS)

Fiore, C. L.; Rice, J. E.; Reinke, M. L.; Podpaly, Y.; Bespamyatnov, I. O.; Rowan, W. L.

2009-11-01

Internal transport barriers (ITBs) spontaneously form near the half radius of Alcator C-Mod plasmas when the EDA H-mode is sustained for several energy confinement times in either off-axis ICRF heated discharges or in purely ohmic heated plasmas. These plasmas exhibit strongly peaked density and pressure profiles, static or peaking temperature profiles, peaking impurity density profiles, and thermal transport coefficients that approach neoclassical values in the core. It has long been observed that the intrinsic central plasma rotation that is strongly co-current following the H-mode transition slows and often reverses as the density peaks as the ITB forms. Recent spatial measurements demonstrate that the rotation profile develops a well in the core region that decreases continuously as central density rises while the value outside of the core remains strongly co-current. This results in the formation of a steep potential gradient/strong electric field at the location of the foot of the ITB density profile. The resulting E X B shearing rate is also quite significant at the foot. These analyses and the implications for plasma transport and stability will be presented.

Modeling and Simulation of a Parametrically Resonant Micromirror With Duty-Cycled Excitation.

PubMed

Shahid, Wajiha; Qiu, Zhen; Duan, Xiyu; Li, Haijun; Wang, Thomas D; Oldham, Kenn R

2014-12-01

High frequency large scanning angle electrostatically actuated microelectromechanical systems (MEMS) mirrors are used in a variety of applications involving fast optical scanning. A 1-D parametrically resonant torsional micromirror for use in biomedical imaging is analyzed here with respect to operation by duty-cycled square waves. Duty-cycled square wave excitation can have significant advantages for practical mirror regulation and/or control. The mirror's nonlinear dynamics under such excitation is analyzed in a Hill's equation form. This form is used to predict stability regions (the voltage-frequency relationship) of parametric resonance behavior over large scanning angles using iterative approximations for nonlinear capacitance behavior of the mirror. Numerical simulations are also performed to obtain the mirror's frequency response over several voltages for various duty cycles. Frequency sweeps, stability results, and duty cycle trends from both analytical and simulation methods are compared with experimental results. Both analytical models and simulations show good agreement with experimental results over the range of duty cycled excitations tested. This paper discusses the implications of changing amplitude and phase with duty cycle for robust open-loop operation and future closed-loop operating strategies.

Age-related changes in HSP25 expression in basal ganglia and cortex of F344/BN rats

PubMed Central

Gupte, Anisha A.; Morris, Jill K.; Zhang, Hongyu; Bomhoff, Gregory L.; Geiger, Paige C.; Stanford, John A.

2010-01-01

Normal aging is associated with chronic oxidative stress. In the basal ganglia, oxidative stress may contribute to the increased risk of Parkinson's disease in the elderly. Neurons are thought to actively utilize compensatory defense mechanisms, such as heat shock proteins (HSPs), to protect from persisting stress. Despite their protective role, little is known about HSP expression in the aging basal ganglia. The purpose of this study was to examine HSP expression in striatum, substantia nigra, globus pallidus and cortex in 6-, 18- and 30-month-old Fischer 344/Brown Norway rats. We found robust age-related increases in phosphorylated and total HSP25 in each brain region studied. Conversely, HSP72 (the inducible form of HSP70) was reduced with age, but only in the striatum. p38 MAPK, a protein implicated in activating HSP25, did not change with age, nor did HSC70 (the constitutive form of HSP70), or HSP60. These results suggest that HSP25 is especially responsive to age-related stress in the basal ganglia. PMID:20144690

VUV photoionization and dissociative photoionization of the prebiotic molecule acetyl cyanide: Theory and experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bellili, A.; Hochlaf, M., E-mail: hochlaf@univ-mlv.fr, E-mail: martin.schwell@lisa.u-pec.fr; Schwell, M., E-mail: hochlaf@univ-mlv.fr, E-mail: martin.schwell@lisa.u-pec.fr

2014-10-07

The present combined theoretical and experimental investigation concerns the single photoionization of gas-phase acetyl cyanide and the fragmentation pathways of the resulting cation. Acetyl cyanide (AC) is inspired from both the chemistry of cyanoacetylene and the Strecker reaction which are thought to be at the origin of medium sized prebiotic molecules in the interstellar medium. AC can be formed by reaction from cyanoacetylene and water but also from acetaldehyde and HCN or the corresponding radicals. In view of the interpretation of vacuum ultraviolet (VUV) experimental data obtained using synchrotron radiation, we explored the ground potential energy surface (PES) of acetylmore » cyanide and of its cation using standard and recently implemented explicitly correlated methodologies. Our PES covers the regions of tautomerism (between keto and enol forms) and of the lowest fragmentation channels. This allowed us to deduce accurate thermochemical data for this astrobiologically relevant molecule. Unimolecular decomposition of the AC cation turns out to be very complex. The implications for the evolution of prebiotic molecules under VUV irradiation are discussed.« less

Implications and mechanism of action of gabapentin in neuropathic pain.

PubMed

Kukkar, Ankesh; Bali, Anjana; Singh, Nirmal; Jaggi, Amteshwar Singh

2013-03-01

Gabapentin is an anti-epileptic agent but now it is also recommended as first line agent in neuropathic pain, particularly in diabetic neuropathy and post herpetic neuralgia. α2δ-1, an auxillary subunit of voltage gated calcium channels, has been documented as its main target and its specific binding to this subunit is described to produce different actions responsible for pain attenuation. The binding to α2δ-1 subunits inhibits nerve injury-induced trafficking of α1 pore forming units of calcium channels (particularly N-type) from cytoplasm to plasma membrane (membrane trafficking) of pre-synaptic terminals of dorsal root ganglion (DRG) neurons and dorsal horn neurons. Furthermore, the axoplasmic transport of α2δ-1 subunits from DRG to dorsal horns neurons in the form of anterograde trafficking is also inhibited in response to gabapentin administration. Gabapentin has also been shown to induce modulate other targets including transient receptor potential channels, NMDA receptors, protein kinase C and inflammatory cytokines. It may also act on supra-spinal region to stimulate noradrenaline mediated descending inhibition, which contributes to its anti-hypersensitivity action in neuropathic pain.

Silicon carbide thyristor

NASA Technical Reports Server (NTRS)

Edmond, John A. (Inventor); Palmour, John W. (Inventor)

1996-01-01

The SiC thyristor has a substrate, an anode, a drift region, a gate, and a cathode. The substrate, the anode, the drift region, the gate, and the cathode are each preferably formed of silicon carbide. The substrate is formed of silicon carbide having one conductivity type and the anode or the cathode, depending on the embodiment, is formed adjacent the substrate and has the same conductivity type as the substrate. A drift region of silicon carbide is formed adjacent the anode or cathode and has an opposite conductivity type as the anode or cathode. A gate is formed adjacent the drift region or the cathode, also depending on the embodiment, and has an opposite conductivity type as the drift region or the cathode. An anode or cathode, again depending on the embodiment, is formed adjacent the gate or drift region and has an opposite conductivity type than the gate.

A chironomid-based record of temperature variability during the past 4000 years in northern China and its possible societal implications

NASA Astrophysics Data System (ADS)

Wang, Haipeng; Chen, Jianhui; Zhang, Shengda; Zhang, David D.; Wang, Zongli; Xu, Qinghai; Chen, Shengqian; Wang, Shijin; Kang, Shichang; Chen, Fahu

2018-03-01

Long-term, high-resolution temperature records which combine an unambiguous proxy and precise dating are rare in China. In addition, the societal implications of past temperature change on a regional scale have not been sufficiently assessed. Here, based on the modern relationship between chironomids and temperature, we use fossil chironomid assemblages in a precisely dated sediment core from Gonghai Lake to explore temperature variability during the past 4000 years in northern China. Subsequently, we address the possible regional societal implications of temperature change through a statistical analysis of the occurrence of wars. Our results show the following. (1) The mean annual temperature (TANN) was relatively high during 4000-2700 cal yr BP, decreased gradually during 2700-1270 cal yr BP and then fluctuated during the last 1270 years. (2) A cold event in the Period of Disunity, the Sui-Tang Warm Period (STWP), the Medieval Warm Period (MWP) and the Little Ice Age (LIA) can all be recognized in the paleotemperature record, as well as in many other temperature reconstructions in China. This suggests that our chironomid-inferred temperature record for the Gonghai Lake region is representative. (3) Local wars in Shanxi Province, documented in the historical literature during the past 2700 years, are statistically significantly correlated with changes in temperature, and the relationship is a good example of the potential societal implications of temperature change on a regional scale.

Prader-Willi syndrome: intellectual abilities and behavioural features by genetic subtype.

PubMed

Milner, Katja M; Craig, Ellen E; Thompson, Russell J; Veltman, Marijcke W M; Thomas, N Simon; Roberts, Sian; Bellamy, Margaret; Curran, Sarah R; Sporikou, Caroline M J; Bolton, Patrick F

2005-10-01

Studies of chromosome 15 abnormality have implicated over-expression of paternally imprinted genes in the 15q11-13 region in the aetiology of autism. To test this hypothesis we compared individuals with Prader-Willi syndrome (PWS) due to uniparental disomy (UPD--where paternally imprinted genes are over-expressed) to individuals with the 15q11-13 deletion form of the syndrome (where paternally imprinted genes are not over-expressed). We also tested reports that PWS cases due to the larger type I (TI) form of deletion show differences to cases with the smaller type II (TII) deletion. Ninety-six individuals with PWS were recruited from genetic centres and the PWS association. Forty-nine individuals were confirmed as having maternal UPD of chromosome 15 and were age and sex matched to 47 individuals with a deletion involving 15q11-13 (32 had the shorter (T II) deletion, and 14 had the longer (TI) deletion). Behavioural assessments were carried out blind to genetic status, using the Autism Diagnostic Observation Schedule (ADOS), the Autism Diagnostic Interview (ADI), the Autism Screening Questionnaire (ASQ), the Children's Yale-Brown Obsessive-Compulsive Scale (CY-BOCS), the Vineland Adaptive Behaviour Scales (VABS), and measurements of intellectual ability, including the Wechsler and Mullen Scales and Raven's Matrices. UPD cases exhibited significantly more autistic-like impairments in reciprocal social interaction on questionnaire, interview and standardised observational measures. Comparison of TI and TII deletion cases revealed few differences, but ability levels tended to be lower in the TI deletion cases. Findings from a large study comparing deletion and UPD forms of Prader-Willi syndrome were consistent with other evidence in indicating that paternally imprinted genes in the 15q11-13 region constitute a genetic risk factor for aspects of autistic symptomatology. These genes may therefore play a role in the aetiology of autism. By contrast with another report, there was no clear-cut relationship between the size of the deletion and the form of cognitive and behavioural phenotype.

Identification and therapeutic potential of a vitronectin binding region of meningococcal msf.

PubMed

Hill, Darryl J; Griffiths, Natalie J; Borodina, Elena; Andreae, Clio A; Sessions, Richard B; Virji, Mumtaz

2015-01-01

The human pathogen Neisseria meningitides (Nm) attains serum resistance via a number of mechanisms, one of which involves binding to the host complement regulator protein vitronectin. We have shown previously that the Meningococcal surface fibril (Msf), a trimeric autotransporter, binds to the activated form of vitronectin (aVn) to increase Nm survival in human serum. In this study, we aimed to identify the aVn-binding region of Msf to assess its potential as an antigen which can elicit antibodies that block aVn binding and/or possess bactericidal properties. Using several recombinant Msf fragments spanning its surface-exposed region, the smallest aVn-binding recombinants were found to span residues 1-86 and 39-124. The use of further deletion constructs and overlapping recombinant Msf fragments suggested that a region of Msf comprising residues 39-82 may be primarily important for aVn binding and that other regions may also be involved but to a lesser extent. Molecular modelling implicated K66 and K68, conserved in all available Msf sequences, to be involved in the interaction. Recombinant fragments which bound to aVn were able to reduce the survival advantage conveyed by aVn-interaction in serum bactericidal assays. Antibodies raised against one such fragment inhibited aVn binding to Msf. In addition, the antibodies enhanced specific killing of Msf-expressing Nm in a dose-dependent manner. Overall, this study identifies an aVn-binding region of Msf, an adhesin known to impart serum resistance properties to the pathogen; and shows that this region of Msf can elicit antibodies with dual properties which reduce pathogen survival within the host and thus has potential as a vaccine antigen.

Identification and Therapeutic Potential of a Vitronectin Binding Region of Meningococcal Msf

PubMed Central

Hill, Darryl J.; Griffiths, Natalie J.; Borodina, Elena; Andreae, Clio A.; Sessions, Richard B.; Virji, Mumtaz

2015-01-01

The human pathogen Neisseria meningitides (Nm) attains serum resistance via a number of mechanisms, one of which involves binding to the host complement regulator protein vitronectin. We have shown previously that the Meningococcal surface fibril (Msf), a trimeric autotransporter, binds to the activated form of vitronectin (aVn) to increase Nm survival in human serum. In this study, we aimed to identify the aVn-binding region of Msf to assess its potential as an antigen which can elicit antibodies that block aVn binding and/or possess bactericidal properties. Using several recombinant Msf fragments spanning its surface-exposed region, the smallest aVn-binding recombinants were found to span residues 1-86 and 39-124. The use of further deletion constructs and overlapping recombinant Msf fragments suggested that a region of Msf comprising residues 39-82 may be primarily important for aVn binding and that other regions may also be involved but to a lesser extent. Molecular modelling implicated K66 and K68, conserved in all available Msf sequences, to be involved in the interaction. Recombinant fragments which bound to aVn were able to reduce the survival advantage conveyed by aVn-interaction in serum bactericidal assays. Antibodies raised against one such fragment inhibited aVn binding to Msf. In addition, the antibodies enhanced specific killing of Msf-expressing Nm in a dose-dependent manner. Overall, this study identifies an aVn-binding region of Msf, an adhesin known to impart serum resistance properties to the pathogen; and shows that this region of Msf can elicit antibodies with dual properties which reduce pathogen survival within the host and thus has potential as a vaccine antigen. PMID:25826209

Lineated Valley Fill and Lobate Debris Aprons in the Deuteronilus Mensae Region, Mars: Implications for Regional Glaciation

NASA Astrophysics Data System (ADS)

Kress, A.; Head, J. W.

2009-03-01

Studies of lineated valley fill and lobate debris aprons in the Deuteronilus Mensae region, Mars, reveal that they are endmembers of a continuum of morphologies with the same mode of origin, which is that of debris-covered glacier.

Neural Representations of Belief Concepts: A Representational Similarity Approach to Social Semantics

PubMed Central

Leshinskaya, Anna; Contreras, Juan Manuel; Caramazza, Alfonso; Mitchell, Jason P.

2017-01-01

Abstract The present experiment identified neural regions that represent a class of concepts that are independent of perceptual or sensory attributes. During functional magnetic resonance imaging scanning, participants viewed names of social groups (e.g. Atheists, Evangelicals, and Economists) and performed a one-back similarity judgment according to 1 of 2 dimensions of belief attributes: political orientation (Liberal to Conservative) or spiritualism (Spiritualist to Materialist). By generalizing across a wide variety of social groups that possess these beliefs, these attribute concepts did not coincide with any specific sensory quality, allowing us to target conceptual, rather than perceptual, representations. Multi-voxel pattern searchlight analysis was used to identify regions in which activation patterns distinguished the 2 ends of both dimensions: Conservative from Liberal social groups when participants focused on the political orientation dimension, and spiritual from Materialist groups when participants focused on the spiritualism dimension. A cluster in right precuneus exhibited such a pattern, indicating that it carries information about belief-attribute concepts and forms part of semantic memory—perhaps a component particularly concerned with psychological traits. This region did not overlap with the theory of mind network, which engaged nearby, but distinct, parts of precuneus. These findings have implications for the neural organization of conceptual knowledge, especially the understanding of social groups. PMID:28108495

Age-Related Changes to the Neural Correlates of Social Evaluation

PubMed Central

Cassidy, Brittany S.; Shih, Joanne Y.; Gutchess, Angela H.

2012-01-01

Recent work suggests the existence of a specialized neural system underlying social processing that may be relatively spared with age, unlike pervasive aging-related decline occurring in many cognitive domains. We investigated how neural mechanisms underlying social evaluation are engaged with age, and how age-related changes to socioemotional goals affect recruitment of regions within this network. In a functional MRI study, fifteen young and fifteen older adults formed behavior-based impressions of individuals. They also responded to a prompt that was interpersonally meaningful, social but interpersonally irrelevant, or non-social. Both age groups engaged regions implicated in mentalizing and impression formation when making social relative to non-social evaluations, including dorsal and ventral medial prefrontal cortices, precuneus, and temporoparietal junction. Older adults had increased activation over young in right temporal pole when making social relative to non-social evaluations, suggesting reliance on past experiences when evaluating others. Young had greater activation than old in posterior cingulate gyrus when making interpersonally irrelevant, compared to interpersonally meaningful, evaluations, potentially reflecting enhanced valuation of this information. The findings demonstrate the age-related preservation of the neural correlates underlying social evaluation, and suggest that functioning in these regions might be mediated by age-related changes in socioemotional goals. PMID:22439896

Words in Context: The Effects of Length, Frequency, and Predictability on Brain Responses During Natural Reading

PubMed Central

Schuster, Sarah; Hawelka, Stefan; Hutzler, Florian; Kronbichler, Martin; Richlan, Fabio

2016-01-01

Word length, frequency, and predictability count among the most influential variables during reading. Their effects are well-documented in eye movement studies, but pertinent evidence from neuroimaging primarily stem from single-word presentations. We investigated the effects of these variables during reading of whole sentences with simultaneous eye-tracking and functional magnetic resonance imaging (fixation-related fMRI). Increasing word length was associated with increasing activation in occipital areas linked to visual analysis. Additionally, length elicited a U-shaped modulation (i.e., least activation for medium-length words) within a brain stem region presumably linked to eye movement control. These effects, however, were diminished when accounting for multiple fixation cases. Increasing frequency was associated with decreasing activation within left inferior frontal, superior parietal, and occipito-temporal regions. The function of the latter region—hosting the putative visual word form area—was originally considered as limited to sublexical processing. An exploratory analysis revealed that increasing predictability was associated with decreasing activation within middle temporal and inferior frontal regions previously implicated in memory access and unification. The findings are discussed with regard to their correspondence with findings from single-word presentations and with regard to neurocognitive models of visual word recognition, semantic processing, and eye movement control during reading. PMID:27365297

Evidence of Titan's Climate History from Evaporite Distribution

NASA Astrophysics Data System (ADS)

MacKenzie, Shannon; Barnes, J. W.; Brown, R.; Sotin, C.; Buratti, B. J.; Clark, R.; Baines, K. H.; Nicholson, P. D.; Le Mouelic, S.; Rodriguez, S.

2013-10-01

5-μm bright material on the surface of Titan has been positively correlated with the shores of RADAR-dark (liquid-filled) and the bottoms of RADAR-bright (empty) lakebeds in the region just south of Ligea Mare by Barnes et al. (2011). This water ice-poor spectral unit was thus proposed to be evaporite, the formerly-dissolved solute deposits left behind when the solvent (here presumably a methane/ethane mixture) evaporates. Because evaporite forms under specific conditions—solute and solvent at or near saturation, no outlets or other means of affecting the solution balance, etc.—the presence of evaporite can shed light on Titan's climate history. Adding to the previously identified cases, we use the breadth of available Cassini VIMS data to comprehensively map new instances of evaporite. In particular, we found new instances of evaporite in the north polar region and the midlatitudes. Our map of the global distribution of Titan's 5-μm-bright deposits can be used to constrain the historical evolution of Titan's surface volatile inventory and may bear on the question of the time variation of the methane concentration in Titan's atmosphere. Furthermore, we explore the implications of the idea that the 5-$\\mu$m-bright areas are indeed mostly evaporitic in nature with respect to the relationship between the regional and global volatile cycles.

The Determinant Factors of Regional Development Toward Land Use Change in Deli Serdang

NASA Astrophysics Data System (ADS)

Lindarto, D.; Sirojuzilam; Badaruddin; Dwira

2017-03-01

The concept of regional development Mebidangro (Medan, Binjai, Deli Serdang, and Karo) creating neighboring region hinterland Medan city with Deli Serdang Regency especially in Tembung village, Percut Sei Tuan District. Population structure in Tembung shows occurrence condition of rural-urban change which seen from the sprawl land use change. The aim of the study is to reveal the genius locus as one of land use change factors. The study conducted with quantitative approach intended at obtaining variables which describing several factors forming land use change. Descriptive approach intended to give an idea, justification, and fact-finding with correct interpretation. Data collected through a purposive sampling of 300 respondents who have built the house between 2010 till 2014. With overlay figure/ground technique, scoring analysis, descriptive quantitative and SEM (Structural Equational Models) gained a result that place character/genius locus (p=0,007) potentially as one of the main land use change driving factors besides accessibility (p=0,039), infrastructure (p=0,005), social-economic p=0,038). Topographic (p=0,663) was inversely potentially. The implication of the findings is required intensive control in space utilization considering the rapid change in land use transformation that tend to have the negative impact of urban sprawl.

Extent of Low-accumulation 'Wind Glaze' Areas on the East Antarctic Plateau: Implications for Continental Ice Mass Balance

NASA Technical Reports Server (NTRS)

Scambos, Theodore A.; Frezzotti, Massimo; Haran, T.; Bohlander, J.; Lenaerts, J. T. M.; Van Den Broeke, M. R.; Jezek, K.; Long, D.; Urbini, S.; Farness, K.;

TDP-43 is directed to stress granules by sorbitol, a novel physiological osmotic and oxidative stressor.

PubMed

Dewey, Colleen M; Cenik, Basar; Sephton, Chantelle F; Dries, Daniel R; Mayer, Paul; Good, Shannon K; Johnson, Brett A; Herz, Joachim; Yu, Gang

2011-03-01

TDP-43, or TAR DNA-binding protein 43, is a pathological marker of a spectrum of neurodegenerative disorders, including amyotrophic lateral sclerosis and frontotemporal lobar degeneration with ubiquitin-positive inclusions. TDP-43 is an RNA/DNA-binding protein implicated in transcriptional and posttranscriptional regulation. Recent work also suggests that TDP-43 associates with cytoplasmic stress granules, which are transient structures that form in response to stress. In this study, we establish sorbitol as a novel physiological stressor that directs TDP-43 to stress granules in Hek293T cells and primary cultured glia. We quantify the association of TDP-43 with stress granules over time and show that stress granule association and size are dependent on the glycine-rich region of TDP-43, which harbors the majority of pathogenic mutations. Moreover, we establish that cells harboring wild-type and mutant TDP-43 have distinct stress responses: mutant TDP-43 forms significantly larger stress granules, and is incorporated into stress granules earlier, than wild-type TDP-43; in striking contrast, wild-type TDP-43 forms more stress granules over time, but the granule size remains relatively unchanged. We propose that mutant TDP-43 alters stress granule dynamics, which may contribute to the progression of TDP-43 proteinopathies.

The role of human ventral visual cortex in motion perception

PubMed Central

Saygin, Ayse P.; Lorenzi, Lauren J.; Egan, Ryan; Rees, Geraint; Behrmann, Marlene

2013-01-01

Visual motion perception is fundamental to many aspects of visual perception. Visual motion perception has long been associated with the dorsal (parietal) pathway and the involvement of the ventral ‘form’ (temporal) visual pathway has not been considered critical for normal motion perception. Here, we evaluated this view by examining whether circumscribed damage to ventral visual cortex impaired motion perception. The perception of motion in basic, non-form tasks (motion coherence and motion detection) and complex structure-from-motion, for a wide range of motion speeds, all centrally displayed, was assessed in five patients with a circumscribed lesion to either the right or left ventral visual pathway. Patients with a right, but not with a left, ventral visual lesion displayed widespread impairments in central motion perception even for non-form motion, for both slow and for fast speeds, and this held true independent of the integrity of areas MT/V5, V3A or parietal regions. In contrast with the traditional view in which only the dorsal visual stream is critical for motion perception, these novel findings implicate a more distributed circuit in which the integrity of the right ventral visual pathway is also necessary even for the perception of non-form motion. PMID:23983030

Two conformational states of the membrane-associated Bacillus thuringiensis Cry4Ba {delta}-endotoxin complex revealed by electron crystallography: Implications for toxin-pore formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ounjai, Puey; Laboratory of Molecular Biophysics and Structural Biochemistry, Institute of Molecular Biology and Genetics, Mahidol University, Salaya Campus, Nakornpathom 73170; Unger, Vinzenz M.

The insecticidal nature of Cry {delta}-endotoxins produced by Bacillus thuringiensis is generally believed to be caused by their ability to form lytic pores in the midgut cell membrane of susceptible insect larvae. Here we have analyzed membrane-associated structures of the 65-kDa dipteran-active Cry4Ba toxin by electron crystallography. The membrane-associated toxin complex was crystallized in the presence of DMPC via detergent dialysis. Depending upon the charge of the adsorbed surface, 2D crystals of the oligomeric toxin complex have been captured in two distinct conformations. The projection maps of those crystals have been generated at 17 A resolution. Both complexes appeared tomore » be trimeric; as in one crystal form, its projection structure revealed a symmetrical pinwheel-like shape with virtually no depression in the middle of the complex. The other form revealed a propeller-like conformation displaying an obvious hole in the center region, presumably representing the toxin-induced pore. These crystallographic data thus demonstrate for the first time that the 65-kDa activated Cry4Ba toxin in association with lipid membranes could exist in at least two different trimeric conformations, conceivably implying the closed and open states of the pore.« less

Fate of Basin-forming Impact Debris from the Moon

NASA Astrophysics Data System (ADS)

Schultz, P. H.; Bruck Syal, M.; Raskin, C.; Owen, J. M.

2016-12-01

Recent work shows that projectile sizes for basin-forming impacts at the Moon are larger than previously estimated [1]. This finding has implications for the source regions of Late Heavy Bombardment impactors as well as added contributions from debris generated by similar basin-forming collisions. At such large scales, portions of the projectile fragment survive without interactions with the surface and continue downrange along the original trajectory. Such a process most likely occurs for oblique collisions (< 35° from the surface tangent) by bodies larger than 10% of the diameter of the Moon. For the SPA collision, more than 20% of the impacting body survives as newly generated Earth/Moon-crossing objects [2]. Over time some of this debris may have contributed to a spike in impact craters 20-50 km in diameter. Here we model lunar impact basin formation using Spheral, an adaptive Smoothed Particle Hydrodynamics code [3,4], focusing on the dynamical fate of basin ejecta and projectile fragments. Models employ self-gravity for the Moon and impactor and include the Earth's gravitational potential. Large impactors and the Moon are each assigned a two-layer, iron core and forsterite mantle structure. The problem is initialized using hydrostatic equlibrium profiles for pressure and density in both the impactor and target. We begin by modeling debris (target and impactor fragments) ejected from the South Pole-Aitken basin impact and extend the analysis to the Imbrium, Orientale, and Crisium basin formation. [1] Schultz, P.H., Crawford, D.A. Origin and implications of non-radial Imbrium Sculpture on the Moon, Nature 535, 391-394(2016). [2] Schultz, P.H., Crawford, D.A. Origin of nearside structural and geochemical anomalies on the Moon. GSA Special Papers 477, 141-159 (2011). [3] Owen, J. M. ASPH modeling of material damage and failure, in: Proceedings of the Fifth International SPHERIC Workshop, 297-304 (2010). [4] Owen, J. M. A compatibly differenced total energy conserving form of SPH. Int. J. Numer. Meth. Fl. 75, 749-774 (2014). This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52- 07NA27344. LLNL-ABS-699382.

Carbon Disulfide (CS2) Mechanisms in Formation of Atmospheric Carbon Dioxide (CO2) Formation from Unconventional Shale Gas Extraction and Processing Operations and Global Climate Change.

PubMed

Rich, Alisa L; Patel, Jay T

2015-01-01

Carbon disulfide (CS2) has been historically associated with the production of rayon, cellophane, and carbon tetrachloride. This study identifies multiple mechanisms by which CS2 contributes to the formation of CO2 in the atmosphere. CS2 and other associated sulfide compounds were found by this study to be present in emissions from unconventional shale gas extraction and processing (E&P) operations. The breakdown products of CS2; carbonyl sulfide (COS), carbon monoxide (CO), and sulfur dioxide (SO2) are indirect greenhouse gases (GHGs) that contribute to CO2 levels in the atmosphere. The heat-trapping nature of CO2 has been found to increase the surface temperature, resulting in regional and global climate change. The purpose of this study is to identify five mechanisms by which CS2 and the breakdown products of CS2 contribute to atmospheric concentrations of CO2. The five mechanisms of CO2 formation are as follows: Chemical Interaction of CS2 and hydrogen sulfide (H2S) present in natural gas at high temperatures, resulting in CO2 formation;Combustion of CS2 in the presence of oxygen producing SO2 and CO2;Photolysis of CS2 leading to the formation of COS, CO, and SO2, which are indirect contributors to CO2 formation;One-step hydrolysis of CS2, producing reactive intermediates and ultimately forming H2S and CO2;Two-step hydrolysis of CS2 forming the reactive COS intermediate that reacts with an additional water molecule, ultimately forming H2S and CO2. CS2 and COS additionally are implicated in the formation of SO2 in the stratosphere and/or troposphere. SO2 is an indirect contributor to CO2 formation and is implicated in global climate change.

Antarctic meteorites

NASA Astrophysics Data System (ADS)

Cassidy, W. A.; Rancitelli, L. A.

1982-04-01

An abundance of meteorites has been discovered on two sites in the Antarctic which may assist in the study of the origins of meteorites and the history of the solar system. Characteristics particular to those meteorites discovered in this region are explained. These specimens, being well preserved due to the climate, have implications in the study of the cosmic ray flux through time, the meteoroid complex in space, and cosmic ray exposure ages. Implications for the study of the Antarctic, particularly the ice flow, are also discussed. Further discoveries of meteorites in this region are anticipated.

Regional Transformation Processes through the Universities-Institutions-Industry Relationship

ERIC Educational Resources Information Center

Cassia, Lucio; Colombelli, Alessandra; Paleari, Stefano

2008-01-01

The purpose of this paper is, first, to highlight the role of the relationships between universities, institutions and firms in different regional development processes working towards a knowledge economy, and, second, to draw some implications for local policy makers. Adopting the regional innovation system (RIS) approach, the authors analyse …

Reporting Hantavirus: A Study of Intercultural Environmental Journalism.

ERIC Educational Resources Information Center

Valenti, JoAnn M.

A study examined media coverage of hantavirus in three Southwestern regional newspapers, including interviews with journalists and sources involved in the coverage, and implications of the media's portrayal of Navajo culture. Content review of regional coverage--67 articles in three regional newspapers were reviewed in the first year of a new…

Method of construction of a multi-cell solar array

NASA Technical Reports Server (NTRS)

Routh, D. E.; Hollis, B. R., Jr.; Feltner, W. R. (Inventor)

1979-01-01

The method of constructing a high voltage, low power, multicell solar array is described. A solar cell base region is formed in a substrate such as but not limited to silicon or sapphire. A protective coating is applied on the base and a patterned etching of the coating and base forms discrete base regions. A semiconductive junction and upper active region are formed in each base region, and defined by photolithography. Thus, discrete cells which are interconnected by metallic electrodes are formed.

Constructivism and the Technology of Instruction: A Conversation.

ERIC Educational Resources Information Center

Duffy, Thomas M., Ed.; Jonassen, David H., Ed.

The essays in this book form a dialogue between instructional developers and learning theorists about the implications of constructivism for instructional design practice. Following an introduction entitled "Constructivism: New Implications for Instructional Technology" (Thomas M. Duffy and David H. Jonassen), the papers are divided into…

Black holes and the multiverse

NASA Astrophysics Data System (ADS)

Garriga, Jaume; Vilenkin, Alexander; Zhang, Jun

2016-02-01

Vacuum bubbles may nucleate and expand during the inflationary epoch in the early universe. After inflation ends, the bubbles quickly dissipate their kinetic energy; they come to rest with respect to the Hubble flow and eventually form black holes. The fate of the bubble itself depends on the resulting black hole mass. If the mass is smaller than a certain critical value, the bubble collapses to a singularity. Otherwise, the bubble interior inflates, forming a baby universe, which is connected to the exterior FRW region by a wormhole. A similar black hole formation mechanism operates for spherical domain walls nucleating during inflation. As an illustrative example, we studied the black hole mass spectrum in the domain wall scenario, assuming that domain walls interact with matter only gravitationally. Our results indicate that, depending on the model parameters, black holes produced in this scenario can have significant astrophysical effects and can even serve as dark matter or as seeds for supermassive black holes. The mechanism of black hole formation described in this paper is very generic and has important implications for the global structure of the universe. Baby universes inside super-critical black holes inflate eternally and nucleate bubbles of all vacua allowed by the underlying particle physics. The resulting multiverse has a very non-trivial spacetime structure, with a multitude of eternally inflating regions connected by wormholes. If a black hole population with the predicted mass spectrum is discovered, it could be regarded as evidence for inflation and for the existence of a multiverse.

Middle Jurassic Radiolaria from a siliceous argillite block in a structural melange zone near Viqueque, Timor Leste: Paleogeographic implications

NASA Astrophysics Data System (ADS)

Haig, David W.; Bandini, Alexandre Nicolas

2013-10-01

Thin-bedded siliceous argillite forming a large block within a structural melange zone at Viqueque, Timor Leste, has yielded a Middle Jurassic (late Bathonian-early Callovian) radiolarian assemblage belonging to Unitary Association Zone 7. Fifty-five species are recognized and illustrated, forming the most diverse radiolarian fauna yet documented from the Jurassic of Timor. The fauna shows little similarity in species content to the few other assemblages previously listed from the Middle or Late Jurassic of Timor, and also has few species in common with faunas known elsewhere in the region from Rotti, Sumatra, South Kalimantan, and Sula. Based on lithofacies similarities and age, the siliceous argillite succession in the melange block at Viqueque is included in the Noni Group originally described as the lower part of the Palelo Series in West Timor. In terms of lithofacies, the Noni Group is distinct from other stratigraphic units known in Timor. It may be associated with volcanic rocks but age relationships are uncertain, although some of the radiolarian cherts in the Noni Group in West Timor have been reported to include tuffaceous sediment. The deep-water character of the siliceous hemipelagite-pelagite facies, the probable volcanic association, and an age close to that of continental breakup in the region suggest deposition in a newly rifted Indian Ocean. In Timor's tectonostratigraphic classification scheme, the Noni Group is here placed in the "Indian Ocean Megasequence".

Investigating the Microstructural Correlation of White Matter in Autism Spectrum Disorder.

PubMed

Dean, Douglas C; Travers, Brittany G; Adluru, Nagesh; Tromp, Do P M; Destiche, Daniel J; Samsin, Danica; Prigge, Molly B; Zielinski, Brandon A; Fletcher, P Thomas; Anderson, Jeffrey S; Froehlich, Alyson L; Bigler, Erin D; Lange, Nicholas; Lainhart, Janet E; Alexander, Andrew L

2016-06-01

White matter microstructure forms a complex and dynamical system that is critical for efficient and synchronized brain function. Neuroimaging findings in children with autism spectrum disorder (ASD) suggest this condition is associated with altered white matter microstructure, which may lead to atypical macroscale brain connectivity. In this study, we used diffusion tensor imaging measures to examine the extent that white matter tracts are interrelated within ASD and typical development. We assessed the strength of inter-regional white matter correlations between typically developing and ASD diagnosed individuals. Using hierarchical clustering analysis, clustering patterns of the pairwise white matter correlations were constructed and revealed to be different between the two groups. Additionally, we explored the use of graph theory analysis to examine the characteristics of the patterns formed by inter-regional white matter correlations and compared these properties between ASD and typical development. We demonstrate that the ASD sample has significantly less coherence in white matter microstructure across the brain compared to that in the typical development sample. The ASD group also presented altered topological characteristics, which may implicate less efficient brain networking in ASD. These findings highlight the potential of graph theory based network characteristics to describe the underlying networks as measured by diffusion magnetic resonance imaging and furthermore indicates that ASD may be associated with altered brain network characteristics. Our findings are consistent with those of a growing number of studies and hypotheses that have suggested disrupted brain connectivity in ASD.

Investigating the Microstructural Correlation of White Matter in Autism Spectrum Disorder

PubMed Central

Travers, Brittany G.; Adluru, Nagesh; Tromp, Do P.M.; Destiche, Daniel J.; Samsin, Danica; Prigge, Molly B.; Zielinski, Brandon A.; Fletcher, P. Thomas; Anderson, Jeffrey S.; Froehlich, Alyson L.; Bigler, Erin D.; Lange, Nicholas; Lainhart, Janet E.; Alexander, Andrew L.

2016-01-01

Abstract White matter microstructure forms a complex and dynamical system that is critical for efficient and synchronized brain function. Neuroimaging findings in children with autism spectrum disorder (ASD) suggest this condition is associated with altered white matter microstructure, which may lead to atypical macroscale brain connectivity. In this study, we used diffusion tensor imaging measures to examine the extent that white matter tracts are interrelated within ASD and typical development. We assessed the strength of inter-regional white matter correlations between typically developing and ASD diagnosed individuals. Using hierarchical clustering analysis, clustering patterns of the pairwise white matter correlations were constructed and revealed to be different between the two groups. Additionally, we explored the use of graph theory analysis to examine the characteristics of the patterns formed by inter-regional white matter correlations and compared these properties between ASD and typical development. We demonstrate that the ASD sample has significantly less coherence in white matter microstructure across the brain compared to that in the typical development sample. The ASD group also presented altered topological characteristics, which may implicate less efficient brain networking in ASD. These findings highlight the potential of graph theory based network characteristics to describe the underlying networks as measured by diffusion magnetic resonance imaging and furthermore indicates that ASD may be associated with altered brain network characteristics. Our findings are consistent with those of a growing number of studies and hypotheses that have suggested disrupted brain connectivity in ASD. PMID:27021440

Black holes and the multiverse

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garriga, Jaume; Vilenkin, Alexander; Zhang, Jun, E-mail: jaume.garriga@ub.edu, E-mail: vilenkin@cosmos.phy.tufts.edu, E-mail: jun.zhang@tufts.edu

Vacuum bubbles may nucleate and expand during the inflationary epoch in the early universe. After inflation ends, the bubbles quickly dissipate their kinetic energy; they come to rest with respect to the Hubble flow and eventually form black holes. The fate of the bubble itself depends on the resulting black hole mass. If the mass is smaller than a certain critical value, the bubble collapses to a singularity. Otherwise, the bubble interior inflates, forming a baby universe, which is connected to the exterior FRW region by a wormhole. A similar black hole formation mechanism operates for spherical domain walls nucleatingmore » during inflation. As an illustrative example, we studied the black hole mass spectrum in the domain wall scenario, assuming that domain walls interact with matter only gravitationally. Our results indicate that, depending on the model parameters, black holes produced in this scenario can have significant astrophysical effects and can even serve as dark matter or as seeds for supermassive black holes. The mechanism of black hole formation described in this paper is very generic and has important implications for the global structure of the universe. Baby universes inside super-critical black holes inflate eternally and nucleate bubbles of all vacua allowed by the underlying particle physics. The resulting multiverse has a very non-trivial spacetime structure, with a multitude of eternally inflating regions connected by wormholes. If a black hole population with the predicted mass spectrum is discovered, it could be regarded as evidence for inflation and for the existence of a multiverse.« less

Tyr721 regulates specific binding of the CSF-1 receptor kinase insert to PI 3'-kinase SH2 domains: a model for SH2-mediated receptor-target interactions.

PubMed Central

Reedijk, M; Liu, X; van der Geer, P; Letwin, K; Waterfield, M D; Hunter, T; Pawson, T

1992-01-01

Efficient binding of active phosphatidylinositol (PI) 3'-kinase to the autophosphorylated macrophage colony stimulating factor receptor (CSF-1R) requires the noncatalytic kinase insert (KI) region of the receptor. To test whether this region could function independently to bind PI 3'-kinase, the isolated CSF-1R KI was expressed in Escherichia coli, and was inducibly phosphorylated on tyrosine. The tyrosine phosphorylated form of the CSF-1R KI bound PI 3'-kinase in vitro, whereas the unphosphorylated form had no binding activity. The p85 alpha subunit of PI 3'-kinase contains two Src homology (SH)2 domains, which are implicated in the interactions of signalling proteins with activated receptors. Bacterially expressed p85 alpha SH2 domains complexed in vitro with the tyrosine phosphorylated CSF-1R KI. Binding of the CSF-1R KI to PI 3'-kinase activity, and to the p85 alpha SH2 domains, required phosphorylation of Tyr721 within the KI domain, but was independent of phosphorylation at Tyr697 and Tyr706. Tyr721 was also critical for the association of activated CSF-1R with PI 3'-kinase in mammalian cells. Complex formation between the CSF-1R and PI 3'-kinase can therefore be reconstructed in vitro in a specific interaction involving the phosphorylated receptor KI and the SH2 domains of p85 alpha. Images PMID:1314163

Symbolic Form in the Pedagogical Implications of Sociolinguistics

ERIC Educational Resources Information Center

Tolic, Mirela

2011-01-01

The author with the help of analysis of symbolic forms and sociolinguistics explains the transformation of "homo communicans in conscious homo symbolicum." He points out the importance of etymological analysis Cassierer's philosophy of symbolic forms and its effects in the modern understanding of sociolinguistics. It is necessary their…

Role of regional planning organizations in transportation planning across boundaries

DOT National Transportation Integrated Search

2014-06-11

The Volpe Center conducted research for the Federal Highway Administration Office of Planning that explores the implications of Regional Planning Organizations (RPO) engaging in transportation planning partnerships and projects of megaregions signifi...

Ocean Data Interoperability Platform (ODIP): using regional data systems for global ocean research

NASA Astrophysics Data System (ADS)

Schaap, D.; Thijsse, P.; Glaves, H.

2017-12-01

Ocean acidification, loss of coral reefs, sustainable exploitation of the marine environment are just a few of the challenges researchers around the world are currently attempting to understand and address. However, studies of these ecosystem level challenges are impossible unless researchers can discover and re-use the large volumes of interoperable multidisciplinary data that are currently only accessible through regional and global data systems that serve discreet, and often discipline specific, user communities. The plethora of marine data systems currently in existence are also using different standards, technologies and best practices making re-use of the data problematic for those engaged in interdisciplinary marine research. The Ocean Data Interoperability Platform (ODIP) is responding to this growing demand for discoverable, accessible and reusable data by establishing the foundations for a common global framework for marine data management. But creation of such an infrastructure is a major undertaking, and one that needs to be achieved in part by establishing different levels of interoperability across existing regional and global marine e-infrastructures. Workshops organised by ODIP II facilitate dialogue between selected regional and global marine data systems in an effort to identify potential solutions that integrate these marine e-infrastructures. The outcomes of these discussions have formed the basis for a number of prototype development tasks that aim to demonstrate effective sharing of data across multiple data systems, and allow users to access data from more than one system through a single access point. The ODIP II project is currently developing four prototype solutions that are establishing interoperability between selected regional marine data management infrastructures in Europe, the USA, Canada and Australia, and with the global POGO, IODE Ocean Data Portal (ODP) and GEOSS systems. The potential impact of implementing these solutions for the individual marine data infrastructures is also being evaluated to determine both the technical and financial implications of their integration within existing systems. These impact assessments form part of the strategy to encourage wider adoption of the ODIP solutions and approach beyond the current scope of the project.

Astrobiological Research on Tardigrades: Implications for Extraterrestrial Life Forms

NASA Astrophysics Data System (ADS)

Horikawa, D. D.

2013-11-01

Tardigrades have been considered as a model for astrobiological studies based on their tolerance to extreme environments. Future research on tardigrades might provide important insight into the possibilities of existence of multicellular life forms.

Calderas and magma reservoirs

NASA Astrophysics Data System (ADS)

Cashman, Katharine V.; Giordano, Guido

2014-11-01

Large caldera-forming eruptions have long been a focus of both petrological and volcanological studies; petrologists have used the eruptive products to probe conditions of magma storage (and thus processes that drive magma evolution), while volcanologists have used them to study the conditions under which large volumes of magma are transported to, and emplaced on, the Earth's surface. Traditionally, both groups have worked on the assumption that eruptible magma is stored within a single long-lived melt body. Over the past decade, however, advances in analytical techniques have provided new views of magma storage regions, many of which provide evidence of multiple melt lenses feeding a single eruption, and/or rapid pre-eruptive assembly of large volumes of melt. These new petrological views of magmatic systems have not yet been fully integrated into volcanological perspectives of caldera-forming eruptions. Here we explore the implications of complex magma reservoir configurations for eruption dynamics and caldera formation. We first examine mafic systems, where stacked-sill models have long been invoked but which rarely produce explosive eruptions. An exception is the 2010 eruption of Eyjafjallajökull volcano, Iceland, where seismic and petrologic data show that multiple sills at different depths fed a multi-phase (explosive and effusive) eruption. Extension of this concept to larger mafic caldera-forming systems suggests a mechanism to explain many of their unusual features, including their protracted explosivity, spatially variable compositions and pronounced intra-eruptive pauses. We then review studies of more common intermediate and silicic caldera-forming systems to examine inferred conditions of magma storage, time scales of melt accumulation, eruption triggers, eruption dynamics and caldera collapse. By compiling data from large and small, and crystal-rich and crystal-poor, events, we compare eruptions that are well explained by simple evacuation of a zoned magma chamber (termed the Standard Model by Gualda and Ghiorso, 2013) to eruptions that are better explained by tapping multiple, rather than single, melt lenses stored within a largely crystalline mush (which we term complex magma reservoirs). We then discuss the implications of magma storage within complex, rather than simple, reservoirs for identifying magmatic systems with the potential to produce large eruptions, and for monitoring eruption progress under conditions where successive melt lenses may be tapped. We conclude that emerging views of complex magma reservoir configurations provide exciting opportunities for re-examining volcanological concepts of caldera-forming systems.

Language Learning as Linguistic Entrepreneurship: Implications for Language Education

ERIC Educational Resources Information Center

De Costa, Peter; Park, Joseph; Wee, Lionel

2016-01-01

The growing emphasis on accountability, competitiveness, efficiency, and profit demonstrates how language education has been impacted by neoliberalism. To bring out the implications of neoliberalism on language education, we explore how language learning is increasingly constructed as a form of linguistic entrepreneurship, or "an act of…

Giant planets and their satellites: What are the relationships between their properties and how they formed

NASA Technical Reports Server (NTRS)

Stevenson, David J.

1991-01-01

The following subject areas are covered: (1) the mass distribution; (2) interior models; (3) atmospheric compositions and their implications; (4) heat flows and their implications; (5) satellite systems; (6) temperatures in the solar nebula; and (7) giant planet formation.

Federal Tax Implications of Charitable Gift Annuities

ERIC Educational Resources Information Center

Teitell, Conrad

1975-01-01

Surveys the federal tax implications of "immediate" charitable gift annuities (annuity payments beginning within one year of transfer) and "deferred payment" charitable gift annuities (beginning at a specified date), both of which enable individuals to make a charitable gift, retain a form of life income, and achieve federal…

Regulated necrosis and its implications in toxicology.

PubMed

Aki, Toshihiko; Funakoshi, Takeshi; Uemura, Koichi

2015-07-03

Recent research developments have revealed that caspase-dependent apoptosis is not the sole form of regulated cell death. Caspase-independent, but genetically regulated, forms of cell death include pyroptosis, necroptosis, parthanatos, and the recently discovered ferroptosis and autosis. Importantly, regulated necrosis can be modulated by small molecule inhibitors/activators, confirming the cell autonomous mechanism of these forms of cell death. The success of small molecule-mediated manipulation of regulated necrosis has produced great changes in the field of cell death research, and has also brought about significant changes in the fields of pharmacology as well as toxicology. In this review, we intend to summarize the modes of regulated cell death other than apoptosis, and discuss their implications in toxicology. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Implications of Orientation in Sheared Cocoa Butter

NASA Astrophysics Data System (ADS)

Guthrie, Sarah E.; Mazzanti, Gianfranco; Marangoni, Alejandro; Idziak, Stefan H. J.

2004-03-01

We will present x-ray and mechanical studies of oriented phases of cocoa butter. The structural elements of foods play an important role in determining such things as quality and shelf stability. The specific structure and properties of cocoa butter, however, are complicated due to the ability of the cocoa butter to form crystals in six polymorphic forms. Recent work has shown that the application of shear not only accelerates the transitions to more stable polymorphs, but also causes orientation of the crystallites[1]. The implications of orientation on the structures formed under conditions of shear and cooling will be described using x-ray diffraction and mechanical measurements. 1 G. Mazzanti, S. E. Guthrie, E. B. Sirota et al., Crystal Growth & Design 3 (5), 721 (2003).

The Discovery of a Disk-Jet System Directly Exposed to Strong Ultraviolet Fields in the Rosette Nebula

NASA Astrophysics Data System (ADS)

Li, Jin Zeng; Rector, Travis A.

2004-01-01

We report on the discovery of an optical jet with a striking morphology in the Rosette Nebula. It could be the most extreme case known of an accretion disk and jet system directly exposed to strong ionization fields that impose strong effects on disk evolution. Unlike typical optical flows, this jet system is found to have a high excitation nature mainly due to disruptive interaction with the violent environment. As a result, the extension of the highly collimated jet and possible former episodes of the degenerated counterjet all show bow-shocked structures. Our results provide implications on how incipience of massive stars in giant molecular clouds prevents further generations of low-mass star formation, and possibly also how isolated substellar/planetary-mass objects in regions of massive star formation are formed.

Single gate p-n junctions in graphene-ferroelectric devices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hinnefeld, J. Henry; Mason, Nadya, E-mail: nadya@illinois.edu; Xu, Ruijuan

Graphene's linear dispersion relation and the attendant implications for bipolar electronics applications have motivated a range of experimental efforts aimed at producing p-n junctions in graphene. Here we report electrical transport measurements of graphene p-n junctions formed via simple modifications to a PbZr{sub 0.2}Ti{sub 0.8}O{sub 3} substrate, combined with a self-assembled layer of ambient environmental dopants. We show that the substrate configuration controls the local doping region, and that the p-n junction behavior can be controlled with a single gate. Finally, we show that the ferroelectric substrate induces a hysteresis in the environmental doping which can be utilized to activatemore » and deactivate the doping, yielding an “on-demand” p-n junction in graphene controlled by a single, universal backgate.« less

Exceptionally Long-Lived Charge Separated State in Zeolitic Imidazolate Framework: Implication for Photocatalytic Applications

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pattengale, Brian; Yang, Sizhuo; Ludwig, John

2016-06-22

Zeolitic Imidazolate Frameworks (ZIFs) have emerged as a novel class of porous metal-organic frameworks (MOFs) for catalysis application because of their exceptional thermal and chemical stability. Inspired by the broad absorption of ZIF-67 in UV-visible-near IR region, we explored its excited state and charge separation dynamics, properties essential for photocatalytic applications, using optical (OTA) and X-ray transient absorption (XTA) spectroscopy. OTA results show that an exceptionally long-lived excited state is formed after photoexcitation. This long-lived excited state was confirmed to be the charge separated state with ligandto-metal charge transfer character using XTA. The surprisingly long-lived charge separated state, together withmore » its intrinsic hybrid nature, all point to its potential application in heterogeneous photocatalysis and energy conversion.« less

Gamma-Ray Bursts from Neutron Star Kicks

NASA Astrophysics Data System (ADS)

Huang, Y. F.; Dai, Z. G.; Lu, T.; Cheng, K. S.; Wu, X. F.

2003-09-01

The idea that gamma-ray bursts might be a phenomenon associated with neutron star kicks was first proposed by Dar & Plaga. Here we study this mechanism in more detail and point out that the neutron star should be a high-speed one (with proper motion larger than ~1000 km s-1). It is shown that the model agrees well with observations in many aspects, such as the energetics, the event rate, the collimation, the bimodal distribution of durations, the narrowly clustered intrinsic energy, and the association of gamma-ray bursts with supernovae and star-forming regions. We also discuss the implications of this model on the neutron star kick mechanism and suggest that the high kick speed was probably acquired as the result of the electromagnetic rocket effect of a millisecond magnetar with an off-centered magnetic dipole.

Quantum mechanical streamlines. I - Square potential barrier

NASA Technical Reports Server (NTRS)

Hirschfelder, J. O.; Christoph, A. C.; Palke, W. E.

1974-01-01

Exact numerical calculations are made for scattering of quantum mechanical particles hitting a square two-dimensional potential barrier (an exact analog of the Goos-Haenchen optical experiments). Quantum mechanical streamlines are plotted and found to be smooth and continuous, to have continuous first derivatives even through the classical forbidden region, and to form quantized vortices around each of the nodal points. A comparison is made between the present numerical calculations and the stationary wave approximation, and good agreement is found between both the Goos-Haenchen shifts and the reflection coefficients. The time-independent Schroedinger equation for real wavefunctions is reduced to solving a nonlinear first-order partial differential equation, leading to a generalization of the Prager-Hirschfelder perturbation scheme. Implications of the hydrodynamical formulation of quantum mechanics are discussed, and cases are cited where quantum and classical mechanical motions are identical.

Economic geology of natural gas hydrate

USGS Publications Warehouse

Max, M.D.; Johnson, A.H.; Dillon, William P.

2006-01-01

This is the first book that attempts to broadly integrate the most recent knowledge in the fields of hydrate nucleation and growth in permafrost regions and marine sediments. Gas hydrate reactant supply, growth models, and implications for pore fill by natural gas hydrate are discussed for both seawater precursors in marine sediments and for permafrost hydrate. These models for forming hydrate concentrations that will constitute targets for exploration are discussed, along with exploration methods. Thermodynamic models for the controlled conversion of hydrate to natural gas, which can be recovered using conventional industry practices, suggest that a number of different types of hydrate occurrence are likely to be practical sources of hydrate natural gas. Current progress in the various aspects of commercial development of hydrate gas deposits are discussed, along with the principal extractive issues that have yet to be resolved.

Intraspecific Adaptations to Thermal Gradients in a Cosmopolitan Coccolithophore

NASA Astrophysics Data System (ADS)

Matson, P. G.; Ladd, T. M.; Iglesias-Rodriguez, D.

2016-02-01

The species concept in marine phytoplankton has enormous biological complexity. Differences in genomic, morphological, physiological, biogeochemical, and ecological/biogeographic properties between strains of the same species can be comparable or even exceed those between species. This complexity is particularly pronounced in the cosmopolitan coccolithophore species Emiliania huxleyi. This bloom-forming species is found at nearly every latitude in a variety of environments including upwelling regions, and exposed to large temperature gradients. We present results from experiments using two strains of E. huxleyi isolated from different latitudes and environmental conditions. Tests involved semi-continuous culturing in lab manipulation experiments to determine how carbon fixation, growth, and morphology respond to temperature-driven alterations in physico-chemical conditions. This talk will discuss the observed differences in physiology within an ecological context and the implications of these biogeochemical differences in modeling carbon fluxes driven by phytoplankton.

Regional inactivations of primate ventral prefrontal cortex reveal two distinct mechanisms underlying negative bias in decision making.

PubMed

Clarke, Hannah F; Horst, Nicole K; Roberts, Angela C

2015-03-31

Dysregulation of the orbitofrontal and ventrolateral prefrontal cortices is implicated in anxiety and mood disorders, but the specific contributions of each region are unknown, including how they gate the impact of threat on decision making. To address this, the effects of GABAergic inactivation of these regions were studied in marmoset monkeys performing an instrumental approach-avoidance decision-making task that is sensitive to changes in anxiety. Inactivation of either region induced a negative bias away from punishment that could be ameliorated with anxiolytic treatment. However, whereas the effects of ventrolateral prefrontal cortex inactivation on punishment avoidance were seen immediately, those of orbitofrontal cortex inactivation were delayed and their expression was dependent upon an amygdala-anterior hippocampal circuit. We propose that these negative biases result from deficits in attentional control and punishment prediction, respectively, and that they provide the basis for understanding how distinct regional prefrontal dysregulation contributes to the heterogeneity of anxiety disorders with implications for cognitive-behavioral treatment strategies.

Air cargo in the Mid-America Freight Coalition region.

DOT National Transportation Integrated Search

2012-08-01

This report contains a contextual review of air cargo transportation in the 10-state Mid-America Freight Coalition (MAFC) region including the industrys recent history, security implications, and integration within the greater MAFC economy. The re...

Between-Region Genetic Divergence Reflects the Mode and Tempo of Tumor Evolution

PubMed Central

Sun, Ruping; Hu, Zheng; Sottoriva, Andrea; Graham, Trevor A.; Harpak, Arbel; Ma, Zhicheng; Fischer, Jared M.; Shibata, Darryl; Curtis, Christina

2017-01-01

Given the implications of tumor dynamics for precision medicine, there is a need to systematically characterize the mode of evolution across diverse solid tumor types. In particular, methods to infer the role of natural selection within established human tumors are lacking. By simulating spatial tumor growth under different evolutionary modes and examining patterns of between-region subclonal genetic divergence from multi-region sequencing (MRS) data, we demonstrate that it is feasible to distinguish tumors driven by strong positive subclonal selection from those evolving neutrally or under weak selection, as the latter fail to dramatically alter subclonal composition. We developed a classifier based on measures of between-region subclonal genetic divergence and projected patient data into model space, revealing different modes of evolution both within and between solid tumor types. Our findings have broad implications for how human tumors progress, accumulate intra-tumor heterogeneity, and ultimately how they may be more effectively treated. PMID:28581503

Orbitofrontal cortex function and structure in depression.

PubMed

Drevets, Wayne C

2007-12-01

The orbitofrontal cortex (OFC) has been implicated in the pathophysiology of major depression by evidence obtained using neuroimaging, neuropathologic, and lesion analysis techniques. The abnormalities revealed by these techniques show a regional specificity, and suggest that some OFC regions which appear cytoarchitectonically distinct also are functionally distinct with respect to mood regulation. For example, the severity of depression correlates inversely with physiological activity in parts of the posterior lateral and medial OFC, consistent with evidence that dysfunction of the OFC associated with cerebrovascular lesions increases the vulnerability for developing the major depressive syndrome. The posterior lateral and medial OFC function may also be impaired in individuals who develop primary mood disorders, as these patients show grey-matter volumetric reductions, histopathologic abnormalities, and altered hemodynamic responses to emotionally valenced stimuli, probabilistic reversal learning, and reward processing. In contrast, physiological activity in the anteromedial OFC situated in the ventromedial frontal polar cortex increases during the depressed versus the remitted phases of major depressive disorder to an extent that is positively correlated with the severity of depression. Effective antidepressant treatment is associated with a reduction in activity in this region. Taken together these data are compatible with evidence from studies in experimental animals indicating that some orbitofrontal and medial prefrontal cortex regions function to inhibit, while others function to enhance, emotional expression. Alterations in the functional balance between these regions and the circuits they form with anatomically related areas of the temporal lobe, striatum, thalamus, and brain stem thus may underlie the pathophysiology of mood disorders, such as major depression.

Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yuan, Ping; Swanson, Kurt A.; Leser, George P.

2014-10-02

The paramyxovirus hemagglutinin-neuraminidase (HN) protein plays multiple roles in viral entry and egress, including binding to sialic acid receptors, activating the fusion (F) protein to activate membrane fusion and viral entry, and cleaving sialic acid from carbohydrate chains. HN is an oligomeric integral membrane protein consisting of an N-terminal transmembrane domain, a stalk region, and an enzymatically active neuraminidase (NA) domain. Structures of the HN NA domains have been solved previously; however, the structure of the stalk region has remained elusive. The stalk region contains specificity determinants for F interactions and activation, underlying the requirement for homotypic F and HNmore » interactions in viral entry. Mutations of the Newcastle disease virus HN stalk region have been shown to affect both F activation and NA activities, but a structural basis for understanding these dual affects on HN functions has been lacking. Here, we report the structure of the Newcastle disease virus HN ectodomain, revealing dimers of NA domain dimers flanking the N-terminal stalk domain. The stalk forms a parallel tetrameric coiled-coil bundle (4HB) that allows classification of extensive mutational data, providing insight into the functional roles of the stalk region. Mutations that affect both F activation and NA activities map predominantly to the 4HB hydrophobic core, whereas mutations that affect only F-protein activation map primarily to the 4HB surface. Two of four NA domains interact with the 4HB stalk, and residues at this interface in both the stalk and NA domain have been implicated in HN function.« less

Water Mass Classification on a Highly Variable Arctic Shelf Region: Origin of Laptev Sea Water Masses and Implications for the Nutrient Budget

NASA Astrophysics Data System (ADS)

Bauch, D.; Cherniavskaia, E.

2018-03-01

Large gradients and inter annual variations on the Laptev Sea shelf prevent the use of uniform property ranges for a classification of major water masses. The central Laptev Sea is dominated by predominantly marine waters, locally formed polynya waters and riverine summer surface waters. Marine waters enter the central Laptev Sea from the northwestern Laptev Sea shelf and originate from the Kara Sea or the Arctic Ocean halocline. Local polynya waters are formed in the Laptev Sea coastal polynyas. Riverine summer surface waters are formed from Lena river discharge and local melt. We use a principal component analysis (PCA) in order to assess the distribution and importance of water masses within the Laptev Sea. This mathematical method is applied to hydro-chemical summer data sets from the Laptev Sea from five years and allows to define water types based on objective and statistically significant criteria. We argue that the PCA-derived water types are consistent with the Laptev Sea hydrography and indeed represent the major water masses on the central Laptev Sea shelf. Budgets estimated for the thus defined major Laptev Sea water masses indicate that freshwater inflow from the western Laptev Sea is about half or in the same order of magnitude as freshwater stored in locally formed polynya waters. Imported water dominates the nutrient budget in the central Laptev Sea; and only in years with enhanced local polynya activity is the nutrient budget of the locally formed water in the same order as imported nutrients.

Exploring the link between urban form and work related transportation using combined satellite image and census information: Case of the Great lakes region

NASA Astrophysics Data System (ADS)

Zhang, Ying; Guindon, Bert; Sun, Krista

2016-05-01

Aspects of urban transportation have significant implications for resource consumption and environmental quality. The level of travel activity, the viability of various modes of transportation and hence the level of transportation-related emissions are influenced by the structure of cities, i.e., their urban forms. While it is widely recognized that satellite remote sensing can provide spatial information on urban land cover and land use, its effective use for understanding impacts of urban form on issues such as transportation requires that this information be integrated with relevant demographic information. A comprehensive bi-national urban database, the Great Lakes Urban Survey (GLUS), comprising all cities with populations in excess of 200,000 has been created from Landsat imagery and national census and transportation survey information from Canada and the United States. A suite of analysis tools are proposed to utilize information sets such as GLUS to investigate the link between urban form and work-related travel. A new indicator, the Employment Deficit Measure (EDM), is proposed to quantify the balance between employment and worker availability at different transit horizons and hence to assess the viability of alternate modes of transportation. It is argued that the high degree of residential and commercial/industrial land uses greatly impact travel to work mode options as well as commute distance. A spatial interaction model is developed and found to accurately predict travel distance aggregated at the census tract level. We argue that this model could also be used to explore the relative levels of travel activity associated with different urban forms.

Functional Relationship between Skull Form and Feeding Mechanics in Sphenodon, and Implications for Diapsid Skull Development

PubMed Central

Curtis, Neil; Jones, Marc E. H.; Shi, Junfen; O'Higgins, Paul; Evans, Susan E.; Fagan, Michael J.

2011-01-01

The vertebrate skull evolved to protect the brain and sense organs, but with the appearance of jaws and associated forces there was a remarkable structural diversification. This suggests that the evolution of skull form may be linked to these forces, but an important area of debate is whether bone in the skull is minimised with respect to these forces, or whether skulls are mechanically “over-designed” and constrained by phylogeny and development. Mechanical analysis of diapsid reptile skulls could shed light on this longstanding debate. Compared to those of mammals, the skulls of many extant and extinct diapsids comprise an open framework of fenestrae (window-like openings) separated by bony struts (e.g., lizards, tuatara, dinosaurs and crocodiles), a cranial form thought to be strongly linked to feeding forces. We investigated this link by utilising the powerful engineering approach of multibody dynamics analysis to predict the physiological forces acting on the skull of the diapsid reptile Sphenodon. We then ran a series of structural finite element analyses to assess the correlation between bone strain and skull form. With comprehensive loading we found that the distribution of peak von Mises strains was particularly uniform throughout the skull, although specific regions were dominated by tensile strains while others were dominated by compressive strains. Our analyses suggest that the frame-like skulls of diapsid reptiles are probably optimally formed (mechanically ideal: sufficient strength with the minimal amount of bone) with respect to functional forces; they are efficient in terms of having minimal bone volume, minimal weight, and also minimal energy demands in maintenance. PMID:22216358

Diversity and repertoire of IgW and IgM VH families in the newborn nurse shark.

PubMed

Rumfelt, Lynn L; Lohr, Rebecca L; Dooley, Helen; Flajnik, Martin F

2004-05-06

Adult cartilaginous fish express three immunoglobulin (Ig) isotypes, IgM, IgNAR and IgW. Newborn nurse sharks, Ginglymostoma cirratum, produce 19S (multimeric) IgM and monomeric/dimeric IgM1gj, a germline-joined, IgM-related VH, and very low amounts of 7S (monomeric) IgM and IgNAR proteins. Newborn IgNAR VH mRNAs are diverse in the complementarity-determining region 3 (CDR3) with non-templated nucleotide (N-region) addition, which suggests that, unlike in many other vertebrates, terminal deoxynucleotidyl transferase (TdT) expressed at birth is functional. IgW is present in the lungfish, a bony fish sharing a common ancestor with sharks 460 million years ago, implying that the IgW VH family is as old as the IgM VH family. This nurse shark study examined the IgM and IgW VH repertoire from birth through adult life, and analyzed the phylogenetic relationships of these gene families. IgM and IgW VH cDNA clones isolated from newborn nurse shark primary and secondary lymphoid tissues had highly diverse and unique CDR3 with N-region addition and VDJ gene rearrangement, implicating functional TdT and RAG gene activity. Despite the clear presence of N-region additions, newborn CDR3 were significantly shorter than those of adults. The IgM clones are all included in a conventional VH family that can be classified into five discrete groups, none of which is orthologous to IgM VH genes in other elasmobranchs. In addition, a novel divergent VH family was orthologous to a published monotypic VH horn shark family. IgW VH genes have diverged sufficiently to form three families. IgM and IgW VH serine codons using the potential somatic hypermutation hotspot sequence occur mainly in VH framework 1 (FR1) and CDR1. Phylogenetic analysis of cartilaginous fish and lungfish IgM and IgW demonstrated they form two major ancient gene groups; furthermore, these VH genes generally diversify (duplicate and diverge) within a species. As in ratfish, sandbar and horn sharks, most nurse shark IgM VH genes are from one family with multiple, heterogeneous loci. Their IgW VH genes have diversified, forming at least three families. The neonatal shark Ig VH CDR3 repertoire, diversified via N-region addition, is shorter than the adult VDJ junction, suggesting one means of postnatal repertoire diversification is expression of longer CDR3 junctions.

The Evolution of Open Magnetic Flux Driven by Photospheric Dynamics

NASA Technical Reports Server (NTRS)

Linker, Jon A.; Lionello, Roberto; Mikic, Zoran; Titov, Viacheslav S.; Antiochos, Spiro K.

2010-01-01

The coronal magnetic field is of paramount importance in solar and heliospheric physics. Two profoundly different views of the coronal magnetic field have emerged. In quasi-steady models, the predominant source of open magnetic field is in coronal holes. In contrast, in the interchange model, the open magnetic flux is conserved, and the coronal magnetic field can only respond to the photospheric evolution via interchange reconnection. In this view the open magnetic flux diffuses through the closed, streamer belt fields, and substantial open flux is present in the streamer belt during solar minimum. However, Antiochos and co-workers, in the form of a conjecture, argued that truly isolated open flux cannot exist in a configuration with one heliospheric current sheet (HCS) - it will connect via narrow corridors to the polar coronal hole of the same polarity. This contradicts the requirements of the interchange model. We have performed an MHD simulation of the solar corona up to 20R solar to test both the interchange model and the Antiochos conjecture. We use a synoptic map for Carrington Rotation 1913 as the boundary condition for the model, with two small bipoles introduced into the region where a positive polarity extended coronal hole forms. We introduce flows at the photospheric boundary surface to see if open flux associated with the bipoles can be moved into the closed-field region. Interchange reconnection does occur in response to these motions. However, we find that the open magnetic flux cannot be simply injected into closed-field regions - the flux eventually closes down and disconnected flux is created. Flux either opens or closes, as required, to maintain topologically distinct open and closed field regions, with no indiscriminate mixing of the two. The early evolution conforms to the Antiochos conjecture in that a narrow corridor of open flux connects the portion of the coronal hole that is nearly detached by one of the bipoles. In the later evolution, a detached coronal hole forms, in apparent violation of the Antiochos conjecture. Further investigation reveals that this detached coronal hole is actually linked to the extended coronal hole by a separatrix footprint on the photosphere of zero width. Therefore, the essential idea of the conjecture is preserved, if we modify it to state that coronal holes in the same polarity region are always linked, either by finite width corridors or separatrix footprints. The implications of these results for interchange reconnection and the sources of the slow solar wind are briefly discussed.

Diversity and repertoire of IgW and IgM VH families in the newborn nurse shark

PubMed Central

Rumfelt, Lynn L; Lohr, Rebecca L; Dooley, Helen; Flajnik, Martin F

2004-01-01

Background Adult cartilaginous fish express three immunoglobulin (Ig) isotypes, IgM, IgNAR and IgW. Newborn nurse sharks, Ginglymostoma cirratum, produce 19S (multimeric) IgM and monomeric/dimeric IgM1gj, a germline-joined, IgM-related VH, and very low amounts of 7S (monomeric) IgM and IgNAR proteins. Newborn IgNAR VH mRNAs are diverse in the complementarity-determining region 3 (CDR3) with non-templated nucleotide (N-region) addition, which suggests that, unlike in many other vertebrates, terminal deoxynucleotidyl transferase (TdT) expressed at birth is functional. IgW is present in the lungfish, a bony fish sharing a common ancestor with sharks 460 million years ago, implying that the IgW VH family is as old as the IgM VH family. This nurse shark study examined the IgM and IgW VH repertoire from birth through adult life, and analyzed the phylogenetic relationships of these gene families. Results IgM and IgW VH cDNA clones isolated from newborn nurse shark primary and secondary lymphoid tissues had highly diverse and unique CDR3 with N-region addition and VDJ gene rearrangement, implicating functional TdT and RAG gene activity. Despite the clear presence of N-region additions, newborn CDR3 were significantly shorter than those of adults. The IgM clones are all included in a conventional VH family that can be classified into five discrete groups, none of which is orthologous to IgM VH genes in other elasmobranchs. In addition, a novel divergent VH family was orthologous to a published monotypic VH horn shark family. IgW VH genes have diverged sufficiently to form three families. IgM and IgW VH serine codons using the potential somatic hypermutation hotspot sequence occur mainly in VH framework 1 (FR1) and CDR1. Phylogenetic analysis of cartilaginous fish and lungfish IgM and IgW demonstrated they form two major ancient gene groups; furthermore, these VH genes generally diversify (duplicate and diverge) within a species. Conclusion As in ratfish, sandbar and horn sharks, most nurse shark IgM VH genes are from one family with multiple, heterogeneous loci. Their IgW VH genes have diversified, forming at least three families. The neonatal shark Ig VH CDR3 repertoire, diversified via N-region addition, is shorter than the adult VDJ junction, suggesting one means of postnatal repertoire diversification is expression of longer CDR3 junctions. PMID:15132758

The Evolution of the Earth's Mantle Structure and Surface and Core-mantle Boundary Heat Flux since the Paleozoic

NASA Astrophysics Data System (ADS)

Zhang, N.; Zhong, S.

2010-12-01

The cause for and time evolution of the seismically observed African and Pacific slow anomalies (i.e., superplumes) are still unclear with two competing proposals. First, the African and Pacific superplumes have remained largely unchanged for at least the last 300 Ma and possibly much longer. Second, the African superplume is formed sometime after the formation of Pangea (i.e., at 330 Ma ago) and the mantle in the African hemisphere is predominated by cold downwelling structures before and during the assembly of Pangea, while the Pacific superplume has been stable for the Pangea supercontinent cycle (i.e., globally a degree-1 structure before the Pangea formation). Here, we construct a plate motion history back to 450 Ma and use it as time-dependent surface boundary conditions in 3-dimensional spherical models of thermochemical mantle convection to study the evolution of mantle structure as well as the surface and core-mantle boundary heat flux. Our results for the mantle structures suggest that while the mantle in the African hemisphere before the assembly of Pangea is predominated by the cold downwelling structure resulting from plate convergence between Gondwana and Laurussia, it is unlikely that the bulk of the African superplume structure can be formed before ~240 Ma (i.e., ~100 Ma after the assembly of Pangea). The evolution of mantle structure has implications for heat flux at the surface and core-mantle boundary (CMB). Our results show that while the plate motion controls the surface heat flux, the major cold downwellings control the core-mantle boundary heat flux. A notable feature in surface heat flux from our models is that the surface heat flux peaks at ~100 Ma ago but decreases for the last 100 Ma due to the breakup of Pangea and its subsequent plate evolution. The CMB heat flux in the equatorial regions shows two minima during period 320-250 Ma and period 120-84 Ma. The first minimum clearly results from the disappearance of a major cold downwelling above the CMB below the Pangea after the assembly of Pangea ends the subduction and convergence between Gondwana and Laurussia. The second minimum arises because the break-up of Pangea leads to subduction of much smaller and younger oceanic lithosphere in the equatorial regions of the CMB. Considering the recent suggestion that CMB heat flux in the equatorial regions controls the frequency of magnetic polarity reversals (Olson et al., 2010), our results have important implications for the Kaiman Reversal Superchron and Cretaceous Normal Superchron.

Ritualistic child sexual abuse in post-conflict Eastern DRC: Factors associated with the phenomenon and implications for social work.

PubMed

Kasherwa, Amani Clovis; Twikirize, Janestic Mwende

2018-04-30

Ritualistic child sexual abuse (RCSA) is a critical and under-recognised form of child maltreatment prevailing in developing countries. In the Democratic Republic of Congo (DRC), children from specific communities suffer complex forms of RCSA perpetrated with extreme brutality by various individuals and groups of conspirators. Although the DRC has achieved significant milestones towards combatting war-related sexual abuse of women and children, disturbing forms of RCSA, notably child kidnapping, rape, child defilement for fetish and superstitious beliefs, child sexual exploitation, and cult-based child marriage persist and affect many victims. This study examines the factors associated with the resurgence of RCSA in post-conflict eastern DRC. The article also discusses the implications of such forms of abuse for social work practice and education in a post-war context. Copyright © 2018 Elsevier Ltd. All rights reserved.

Business and Technology Students' Preferences for English-Language Accents: Implications for Business Communication.

ERIC Educational Resources Information Center

Scott, James Calvert; Green, Diana J.; Rosewarne, David

1997-01-01

Multiple recordings of a message in various accents were heard by 218 college students, including 26 nonnative English speakers. Ranked English accents in descending order were General American, British, Australian, Indian, Estuary, and Japanese. Perceptual differences were related to gender, ethnicity, nationality, and region. Implications for…

Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer's disease.

PubMed

Gjoneska, Elizabeta; Pfenning, Andreas R; Mathys, Hansruedi; Quon, Gerald; Kundaje, Anshul; Tsai, Li-Huei; Kellis, Manolis

2015-02-19

Alzheimer's disease (AD) is a severe age-related neurodegenerative disorder characterized by accumulation of amyloid-β plaques and neurofibrillary tangles, synaptic and neuronal loss, and cognitive decline. Several genes have been implicated in AD, but chromatin state alterations during neurodegeneration remain uncharacterized. Here we profile transcriptional and chromatin state dynamics across early and late pathology in the hippocampus of an inducible mouse model of AD-like neurodegeneration. We find a coordinated downregulation of synaptic plasticity genes and regulatory regions, and upregulation of immune response genes and regulatory regions, which are targeted by factors that belong to the ETS family of transcriptional regulators, including PU.1. Human regions orthologous to increasing-level enhancers show immune-cell-specific enhancer signatures as well as immune cell expression quantitative trait loci, while decreasing-level enhancer orthologues show fetal-brain-specific enhancer activity. Notably, AD-associated genetic variants are specifically enriched in increasing-level enhancer orthologues, implicating immune processes in AD predisposition. Indeed, increasing enhancers overlap known AD loci lacking protein-altering variants, and implicate additional loci that do not reach genome-wide significance. Our results reveal new insights into the mechanisms of neurodegeneration and establish the mouse as a useful model for functional studies of AD regulatory regions.

Modeling Hydrological Services in Shade Grown Coffee Systems: Case Study of the Pico Duarte Region of the Dominican Republic

NASA Astrophysics Data System (ADS)

Erickson, J. D.; Gross, L.; Agosto Filion, N.; Bagstad, K.; Voigt, B. G.; Johnson, G.

2010-12-01

The modification of hydrologic systems in coffee-dominated landscapes varies widely according to the degree of shade trees incorporated in coffee farms. Compared to mono-cropping systems, shade coffee can produce both on- and off-farm benefits in the form of soil retention, moderation of sediment transport, and lower hydropower generating costs. The Pico Duarte Coffee Region and surrounding Madres de Las Aguas (Mother of Waters) Conservation Area in the Dominican Republic is emblematic of the challenges and opportunities of ecosystem service management in coffee landscapes. Shade coffee poly-cultures in the region play an essential role in ensuring ecosystem function to conserve water resources, as well as provide habitat for birds, sequester carbon, and provide consumptive resources to households. To model the provision, use, and flow of ecosystem services from coffee farms in the region, an application of the Artificial Intelligence for Ecosystem Services (ARIES) model was developed with particular focus on sediment regulation. ARIES incorporates an array of techniques from data mining, image analysis, neural networks, Bayesian statistics, information theory, and expert systems to model the production, delivery, and demand for ecosystem services. Geospatial data on slope, soils, and vegetation cover is combined with on-farm data collection of coffee production, tree diversity, and intercropping of household food. Given hydropower production and river recreation in the region, the management of sedimentation through on-farm practices has substantial, currently uncompensated value that has received recent attention as the foundation for a payment for ecosystem services system. Scenario analysis of the implications of agro-forestry management choices on farmer livelihoods and the multiple beneficiaries of farm-provided hydrological services provide a foundation for ongoing discussions in the region between local, national, and international interests.

When math operations have visuospatial meanings versus purely symbolic definitions: Which solving stages and brain regions are affected?

PubMed

Pyke, Aryn A; Fincham, Jon M; Anderson, John R

2017-06-01

How does processing differ during purely symbolic problem solving versus when mathematical operations can be mentally associated with meaningful (here, visuospatial) referents? Learners were trained on novel math operations (↓, ↑), that were defined strictly symbolically or in terms of a visuospatial interpretation (operands mapped to dimensions of shaded areas, answer = total area). During testing (scanner session), no visuospatial representations were displayed. However, we expected visuospatially-trained learners to form mental visuospatial representations for problems, and exhibit distinct activations. Since some solution intervals were long (~10s) and visuospatial representations might only be instantiated in some stages during solving, group differences were difficult to detect when treating the solving interval as a whole. However, an HSMM-MVPA process (Anderson and Fincham, 2014a) to parse fMRI data identified four distinct problem-solving stages in each group, dubbed: 1) encode; 2) plan; 3) compute; and 4) respond. We assessed stage-specific differences across groups. During encoding, several regions implicated in general semantic processing and/or mental imagery were more active in visuospatially-trained learners, including: bilateral supramarginal, precuneus, cuneus, parahippocampus, and left middle temporal regions. Four of these regions again emerged in the computation stage: precuneus, right supramarginal/angular, left supramarginal/inferior parietal, and left parahippocampal gyrus. Thus, mental visuospatial representations may not just inform initial problem interpretation (followed by symbolic computation), but may scaffold on-going computation. In the second stage, higher activations were found among symbolically-trained solvers in frontal regions (R. medial and inferior and L. superior) and the right angular and middle temporal gyrus. Activations in contrasting regions may shed light on solvers' degree of use of symbolic versus mental visuospatial strategies, even in absence of behavioral differences. Copyright © 2017 Elsevier Inc. All rights reserved.

Steps to Successful Professional Development in Head Start

ERIC Educational Resources Information Center

Trivette, Carol M.; Raab, Melinda; Dunst, Carl J.

2012-01-01

This article discusses the implications of utilizing coaching-mentoring strategies with Head Start teachers identified from the results of a study which used an evidence-based approach to professional development. Early childhood and coaching practices that formed the basis of the study are explained. Implications from the study results regarding…

Organizational Structures for International Universities: Implications for Campus Autonomy, Academic Freedom, Collegiality, and Conflict

ERIC Educational Resources Information Center

Edwards, Ron; Crosling, Glenda; Lim, Ngat-Chin

2014-01-01

One significant form of transnational higher education is the International Branch Campus (IBC), in effect an "outpost" of the parent institution located in another country. Its organizational structure is alignable with offshore subsidiaries of multinational corporations (MNCs). The implications of organizational structure for academic…

Equal Employment Opportunity and ADA Implications of Screening and Selection.

ERIC Educational Resources Information Center

Norton, Steven D.; Hundley, John R.

1995-01-01

The process of screening and selecting new employees is viewed as one having discrete steps, each with implications concerning Equal Employment Opportunity and the Americans with Disabilities Act. Several screening and selection methods are examined, with questionnaire forms used by Indiana University, South Bend provided for illustration. Typical…

Managerialism and Higher Education Governance: Implications for South African Universities?

ERIC Educational Resources Information Center

Adams, F.

2006-01-01

This article identifies some of the implications of corporate forms of higher education governance for the management of South African universities. It explores corporate higher educational governance with reference to institutional autonomy incorporating academic freedom. It is the contention of this article that the primary driver of higher…

Properties of compact HII regions and their host clumps in the inner vs outer Galaxy - early results from SASSy

NASA Astrophysics Data System (ADS)

Djordjevic, Julie; Thompson, Mark; Urquhart, James S.

2017-01-01

We present a catalog of compact and ultracompact HII regions for all Galactocentric radii. Previous catalogs focus on the inner Galaxy (Rgal ≤ 8 kpc) but the recent SASSy 870 µm survey allows us to identify regions out to ~20 kpc. Early samples are also filled with false classifications leading to uncertainty when deriving star formation efficiencies in Galactic models. These objects have similar mid-IR colours to HII regions. Urquhart et al. (2013) found that they could use mid-IR, submm, and radio data to identify the genuine compact HII regions, avoiding confusion. They used this method on a small portion of the Galaxy (10 < l < 60), identifying 213 HII regions embedded in 170 clumps. We use ATLASGAL and SASSy, crossmatched with RMS, to sample the remaining galactic longitudes out to Rgal = 20 kpc. We derive the properties of the identified compact HII regions and their host clumps while addressing the implications for recent massive star formation in the outer Galaxy. Observations towards nearby galaxies are biased towards massive stars, affecting simulations and overestimating models for galactic evolution and star formation rates. The Milky Way provides the ideal template for studying factors affecting massive star formation rates and efficiencies at high resolution, thus fine-tuning those models. We find that there is no significant change in the rate of massive star formation in the outer vs inner Galaxy. Despite some peaks in known complexes and possible correlation with spiral arms, the outer Galaxy appears to produce massive stars as efficiently as the inner regions. However, many of the potential star forming SASSy clumps have no available radio counterpart to confirm the presence of an HII region or other star formation tracer. Follow-up observations will be required to verify this conclusion and are currently in progress.

Decline of the migratory form in bull charr, Salvelinus confluentus, and implications for conservation

Treesearch

M. Lee Nelson; Thomas E. McMahon; Russell F. Thurow

2002-01-01

Large-bodied, migratory life history forms of bull charr, Salvelinus confluentus, were historically abundant in northwestern North America, but many remaining populations of this now-threatened species presently persist as small-bodied residents isolated in headwater streams.We examined whether the migratory form has been lost from headwater...

Eastern Thought and Movement Forms: Possible Implications for Western Sport and Physical Education.

ERIC Educational Resources Information Center

Case, Robert W.

American sport stresses the outward aspects of participation such as outcomes, rewards, goals, and winning; Eastern thought and movement forms emphasize the inner and spiritual aspects of human movement such as self-realization, spontaneity, body awareness, and enlightenment. In relating Eastern thought and movement forms to Western sport, five…

Learning and memory: regional changes in N-methyl-D-aspartate receptors in the chick brain after imprinting.

PubMed Central

McCabe, B J; Horn, G

1988-01-01

An extensive series of experiments has implicated a restricted region of the chick forebrain in the learning process of imprinting. The region is the intermediate and medial part of the hyperstriatum ventrale (IMHV). Previous studies have shown that training is associated with an increase in the area of the postsynaptic density of axospinous synapses in the left but not the right IMHV. The postsynaptic density is a site of high receptor density, and at least some axospinous synapses are excitatory. We found that imprinting is associated with a 59% increase in N-methyl-D-aspartate-sensitive binding of the excitatory amino acid L-[3H]glutamic acid in the left IMHV. The increase is probably due to an increased number of binding sites. The profile of sensitivity of the sites to a series of amino-, phosphono-substituted carboxylic acids (2-amino-3-phosphonopropionate to 2-amino-8-phosphonooctanoate) is characteristic of N-methyl-D-aspartate-type receptors. There were no significant effects of training on binding in the right IMHV. The effect of training on left IMHV binding could not be attributed to light exposure, arousal, or motor activity per se but was a function of how much the chicks learned. The changes in the left IMHV could increase the effectiveness of synaptic transmission in a region crucial for information storage and so form a neural basis for recognition memory. PMID:2833757

Modulation of the composite face effect by unintended emotion cues.

PubMed

Gray, Katie L H; Murphy, Jennifer; Marsh, Jade E; Cook, Richard

2017-04-01

When upper and lower regions from different emotionless faces are aligned to form a facial composite, observers 'fuse' the two halves together, perceptually. The illusory distortion induced by task-irrelevant ('distractor') halves hinders participants' judgements about task-relevant ('target') halves. This composite-face effect reveals a tendency to integrate feature information from disparate regions of intact upright faces, consistent with theories of holistic face processing. However, observers frequently perceive emotion in ostensibly neutral faces, contrary to the intentions of experimenters. This study sought to determine whether this 'perceived emotion' influences the composite-face effect. In our first experiment, we confirmed that the composite effect grows stronger as the strength of distractor emotion increased. Critically, effects of distractor emotion were induced by weak emotion intensities, and were incidental insofar as emotion cues hindered image matching, not emotion labelling per se . In Experiment 2, we found a correlation between the presence of perceived emotion in a set of ostensibly neutral distractor regions sourced from commonly used face databases, and the strength of illusory distortion they induced. In Experiment 3, participants completed a sequential matching composite task in which half of the distractor regions were rated high and low for perceived emotion, respectively. Significantly stronger composite effects were induced by the high-emotion distractor halves. These convergent results suggest that perceived emotion increases the strength of the composite-face effect induced by supposedly emotionless faces. These findings have important implications for the study of holistic face processing in typical and atypical populations.

N-terminal segments modulate the α-helical propensities of the intrinsically disordered basic regions of bZIP proteins.

PubMed

Das, Rahul K; Crick, Scott L; Pappu, Rohit V

2012-02-17

Basic region leucine zippers (bZIPs) are modular transcription factors that play key roles in eukaryotic gene regulation. The basic regions of bZIPs (bZIP-bRs) are necessary and sufficient for DNA binding and specificity. Bioinformatic predictions and spectroscopic studies suggest that unbound monomeric bZIP-bRs are uniformly disordered as isolated domains. Here, we test this assumption through a comparative characterization of conformational ensembles for 15 different bZIP-bRs using a combination of atomistic simulations and circular dichroism measurements. We find that bZIP-bRs have quantifiable preferences for α-helical conformations in their unbound monomeric forms. This helicity varies from one bZIP-bR to another despite a significant sequence similarity of the DNA binding motifs (DBMs). Our analysis reveals that intramolecular interactions between DBMs and eight-residue segments directly N-terminal to DBMs are the primary modulators of bZIP-bR helicities. We test the accuracy of this inference by designing chimeras of bZIP-bRs to have either increased or decreased overall helicities. Our results yield quantitative insights regarding the relationship between sequence and the degree of intrinsic disorder within bZIP-bRs, and might have general implications for other intrinsically disordered proteins. Understanding how natural sequence variations lead to modulation of disorder is likely to be important for understanding the evolution of specificity in molecular recognition through intrinsically disordered regions (IDRs). Copyright © 2011 Elsevier Ltd. All rights reserved.

Climate, Water, and Human Health: Large Scale Hydroclimatic Controls in Forecasting Cholera Epidemics

NASA Astrophysics Data System (ADS)

Akanda, A. S.; Jutla, A. S.; Islam, S.

2009-12-01

Despite ravaging the continents through seven global pandemics in past centuries, the seasonal and interannual variability of cholera outbreaks remain a mystery. Previous studies have focused on the role of various environmental and climatic factors, but provided little or no predictive capability. Recent findings suggest a more prominent role of large scale hydroclimatic extremes - droughts and floods - and attempt to explain the seasonality and the unique dual cholera peaks in the Bengal Delta region of South Asia. We investigate the seasonal and interannual nature of cholera epidemiology in three geographically distinct locations within the region to identify the larger scale hydroclimatic controls that can set the ecological and environmental ‘stage’ for outbreaks and have significant memory on a seasonal scale. Here we show that two distinctly different, pre and post monsoon, cholera transmission mechanisms related to large scale climatic controls prevail in the region. An implication of our findings is that extreme climatic events such as prolonged droughts, record floods, and major cyclones may cause major disruption in the ecosystem and trigger large epidemics. We postulate that a quantitative understanding of the large-scale hydroclimatic controls and dominant processes with significant system memory will form the basis for forecasting such epidemic outbreaks. A multivariate regression method using these predictor variables to develop probabilistic forecasts of cholera outbreaks will be explored. Forecasts from such a system with a seasonal lead-time are likely to have measurable impact on early cholera detection and prevention efforts in endemic regions.

Deletion of the Mouse Homolog of CACNA1C Disrupts Discrete Forms of Hippocampal-Dependent Memory and Neurogenesis within the Dentate Gyrus.

PubMed

Temme, Stephanie J; Bell, Ryan Z; Fisher, Grace L; Murphy, Geoffrey G

2016-01-01

L-type voltage-gated calcium channels (LVGCCs) have been implicated in various forms of learning, memory, and synaptic plasticity. Within the hippocampus, the LVGCC subtype, Ca V 1.2 is prominently expressed throughout the dentate gyrus. Despite the apparent high levels of Ca V 1.2 expression in the dentate gyrus, the role of Ca V 1.2 in hippocampal- and dentate gyrus-associated forms of learning remain unknown. To address this question, we examined alternate forms of hippocampal-dependent associative and spatial memory in mice lacking the mouse ortholog of CACNA1C ( Cacna1c ), which encodes Ca V 1.2, with dentate gyrus function implicated in difficult forms of each task. We found that while the deletion of Ca V 1.2 did not impair the acquisition of fear of a conditioned context, mice lacking Ca V 1.2 exhibited deficits in the ability to discriminate between two contexts, one in which the mice were conditioned and one in which they were not. Similarly, Ca V 1.2 knock-out mice exhibited normal acquisition and recall of the location of the hidden platform in a standard Morris water maze, but were unable to form a memory of the platform location when the task was made more difficult by restricting the number of available spatial cues. Within the dentate gyrus, pan-neuronal deletion of Ca V 1.2 resulted in decreased cell proliferation and the numbers of doublecortin-positive adult-born neurons, implicating Ca V 1.2 in adult neurogenesis. These results suggest that Ca V 1.2 is important for dentate gyrus-associated tasks and may mediate these forms of learning via a role in adult neurogenesis and cell proliferation within the dentate gyrus.

Depression-related increases and decreases in appetite reveal dissociable patterns of aberrant activity in reward and interoceptive neurocircuitry

PubMed Central

Simmons, W. Kyle; Burrows, Kaiping; Avery, Jason A.; Kerr, Kara L.; Bodurka, Jerzy; Savage, Cary R.; Drevets, Wayne C.

2016-01-01

Objective Appetite and weight changes are common but variable diagnostic markers in major depressive disorder: some depressed individuals manifest increased appetite, while others lose their appetite. Many of the brain regions implicated in appetitive responses to food have also been implicated in depression. It is thus remarkable that there exists no published research comparing the neural responses to food stimuli of depressed patients with increased versus decreased appetites. Method Using functional magnetic resonance imaging we compared brain activity in unmedicated depressed patients with increased or decreased appetite, and healthy control subjects, while viewing photographs of food and non-food objects. We also measured how resting-state functional connectivity related to subjects’ food pleasantness ratings. Results Within putative reward regions, depressed participants with increased appetites exhibited greater hemodynamic activity to food stimuli than both those reporting appetite decreases and healthy control subjects. In contrast, depressed subjects experiencing appetite loss exhibited hypoactivation within a region of the mid-insula implicated in interoception, with no difference observed in this region between healthy subjects and those with depression-related appetite increases. Mid-insula activity was negatively correlated with food pleasantness ratings of depressed participants with increased appetites, and its functional connectivity to reward circuitry was positively correlated with food pleasantness ratings. Conclusions Depression-related increases in appetite are associated with hyperactivation of putative mesocorticolimbic reward circuitry, while depression-related appetite loss is associated with hypoactivation of insular regions that support monitoring the body’s physiological state. Importantly, the interactions among these regions also contribute to individual differences in the depression-related appetite changes. PMID:26806872

Depression-Related Increases and Decreases in Appetite: Dissociable Patterns of Aberrant Activity in Reward and Interoceptive Neurocircuitry.

PubMed

Simmons, W Kyle; Burrows, Kaiping; Avery, Jason A; Kerr, Kara L; Bodurka, Jerzy; Savage, Cary R; Drevets, Wayne C

2016-04-01

Appetite and weight changes are common but variable diagnostic markers in major depressive disorder: some depressed individuals manifest increased appetite, while others lose their appetite. Many of the brain regions implicated in appetitive responses to food have also been implicated in depression. It is thus remarkable that there exists no published research comparing the neural responses to food stimuli of depressed patients with increased versus decreased appetites. Using functional MRI, brain activity was compared in unmedicated depressed patients with increased or decreased appetite and healthy control subjects while viewing photographs of food and nonfood objects. The authors also measured how resting-state functional connectivity related to subjects' food pleasantness ratings. Within putative reward regions, depressed participants with increased appetites exhibited greater hemodynamic activity to food stimuli than both those reporting appetite decreases and healthy control subjects. In contrast, depressed subjects experiencing appetite loss exhibited hypoactivation within a region of the mid-insula implicated in interoception, with no difference observed in this region between healthy subjects and those with depression-related appetite increases. Mid-insula activity was negatively correlated with food pleasantness ratings of depressed participants with increased appetites, and its functional connectivity to reward circuitry was positively correlated with food pleasantness ratings. Depression-related increases in appetite are associated with hyperactivation of putative mesocorticolimbic reward circuitry, while depression-related appetite loss is associated with hypoactivation of insular regions that support monitoring the body's physiological state. Importantly, the interactions among these regions also contribute to individual differences in the depression-related appetite changes.

Evaluating the distributional effects of regional transportation plans and projects : final report.

DOT National Transportation Integrated Search

2017-05-01

Metropolitan planning organizations (MPOs) have long been required to consider the equity implications of their regional transportation plans and processes. Funded by the National Institute for Transportation and Communities, this research aims to pr...

Microduplication of 3p26.3 Implicated in Cognitive Development

PubMed Central

Te Weehi, Leah; Maikoo, Raj; Mc Cormack, Adrian; Mazzaschi, Roberto; Ashton, Fern; Zhang, Liangtao; George, Alice M.; Love, Donald R.

2014-01-01

We report here a 34-month-old boy with global developmental delay referred for molecular karyotyping and fragile X studies. Molecular karyotype analysis revealed a microduplication in the 3p26.3 region involving part of the CHL1 and CNTN6 genes. Several deletions, one translocation, and one duplication have previously been described in this region of chromosome 3. The CHL1 gene has been proposed as a dosage-sensitive gene with a central role in cognitive development, and so the microduplication reported here appears to be implicated in our patient's phenotype. PMID:24778888

Ferrihydrite Alteration to Magnetite, Maghemite and Hematite; Implications for Iron Oxides on Mars

NASA Technical Reports Server (NTRS)

Zent, A. P.; Bishop, J. L.; Mancinelli, R. L.; Olsen, M.; Wagner, P. A.

2000-01-01

Synthetic ferrihydrites have been altered to form magnetite, maghemite and hematite through low-temperature heating experiments (some with an organic reductant). Maghemite formed in this manner could become an indicator for Astrobiology on Mars.

The head problem. The organizational significance of segmentation in head development.

PubMed

Horder, Tim J; Presley, Robert; Slípka, Jaroslav

2010-01-01

This review argues for the segmental basis of chordate head organization which, like somite-based segmental organization in the trunk, takes its origin from early mesodermal development. The review builds on, and brings up to date, Goodrich's well-known scheme of head organization. It surveys recent data in support of this scheme and shows how evidence and arguments supposedly in conflict with it can be accommodated. Many of the arguments revolve around matters of methodology; the limitations of older LM, SEM (on which the concept of "somitomeres" is based) and recent molecular evidence (which has sometimes been seen as allocating the central role in head organization to the CNS and the neural crest) are highlighted and shown to explain a number of claims contrary to Goodrich's. We provide (in Part 2) a new, comparative survey of the best available evidence most directly relevant to the Goodrich Bauplan, with a special emphasis on stem chordates. The postotic region has commonly been seen as segmentally organized: the critical issues concern the preotic region. There are many reasons why Goodrich's three preotic segments may become specialized during evolution and why the underlying initial segmental organization may be overridden in later stages during embryonic development; we refer to a number of these. We conclude that the preotic segmental Bauplan is remarkably conserved and most explicitly demonstrated among stem forms, but we also suggest that the concept of the prechordal plate requires careful reexamination. Central to our overall analysis is the importance of the epigenetic nature of embryogenesis; its implications are made clear. Finally we speculate on evolutionary implications for the origin of the head and its specialized features. The review is intended to serve as a resource giving access to references to a wealth of now neglected, older data on anamniote embryology.

Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain

PubMed Central

2012-01-01

Background Post-transcriptional control of gene expression is mostly conducted by specific elements in untranslated regions (UTRs) of mRNAs, in collaboration with specific binding proteins and RNAs. In several well characterized cases, these RNA elements are known to form stable secondary structures. RNA secondary structures also may have major functional implications for long noncoding RNAs (lncRNAs). Recent transcriptional data has indicated the importance of lncRNAs in brain development and function. However, no methodical efforts to investigate this have been undertaken. Here, we aim to systematically analyze the potential for RNA structure in brain-expressed transcripts. Results By comprehensive spatial expression analysis of the adult mouse in situ hybridization data of the Allen Mouse Brain Atlas, we show that transcripts (coding as well as non-coding) associated with in silico predicted structured probes are highly and significantly enriched in almost all analyzed brain regions. Functional implications of these RNA structures and their role in the brain are discussed in detail along with specific examples. We observe that mRNAs with a structure prediction in their UTRs are enriched for binding, transport and localization gene ontology categories. In addition, after manual examination we observe agreement between RNA binding protein interaction sites near the 3’ UTR structures and correlated expression patterns. Conclusions Our results show a potential use for RNA structures in expressed coding as well as noncoding transcripts in the adult mouse brain, and describe the role of structured RNAs in the context of intracellular signaling pathways and regulatory networks. Based on this data we hypothesize that RNA structure is widely involved in transcriptional and translational regulatory mechanisms in the brain and ultimately plays a role in brain function. PMID:22651826

Altered Cav1.2 function in the Timothy syndrome mouse model produces ascending serotonergic abnormalities.

PubMed

Ehlinger, Daniel G; Commons, Kathryn G

2017-10-01

Polymorphism in the gene CACNA1C, encoding the pore-forming subunit of Cav1.2 L-type calcium channels, has one of the strongest genetic linkages to schizophrenia, bipolar disorder and major depressive disorder: psychopathologies in which serotonin signaling has been implicated. Additionally, a gain-of-function mutation in CACNA1C is responsible for the neurodevelopmental disorder Timothy syndrome that presents with prominent behavioral features on the autism spectrum. Given an emerging role for serotonin in the etiology of autism spectrum disorders (ASD), we investigate the relationship between Cav1.2 and the ascending serotonin system in the Timothy syndrome type 2 (TS2-neo) mouse, which displays behavioral features consistent with the core triad of ASD. We find that TS2-neo mice exhibit enhanced serotonin tissue content and axon innervation of the dorsal striatum, as well as decreased serotonin turnover in the amygdala. These regionally specific alterations are accompanied by an enhanced active coping response during acute stress (forced swim), serotonin neuron Fos activity in the caudal dorsal raphe, and serotonin type 1A receptor-dependent feedback inhibition of the rostral dorsal raphe nuclei. Collectively, these results suggest that the global gain-of-function Cav1.2 mutation associated with Timothy syndrome has pleiotropic effects on the ascending serotonin system including neuroanatomical changes, regional differences in forebrain serotonin metabolism and feedback regulatory control mechanisms within the dorsal raphe. Altered activity of the ascending serotonin system continues to emerge as a common neural signature across several ASD mouse models, and the capacity for Cav1.2 L-type calcium channels to impact both serotonin structure and function has important implications for several neuropsychiatric conditions. © 2017 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.

Gα12 structural determinants of Hsp90 interaction are necessary for serum response element-mediated transcriptional activation.

PubMed

Montgomery, Ellyn R; Temple, Brenda R S; Peters, Kimberly A; Tolbert, Caitlin E; Booker, Brandon K; Martin, Joseph W; Hamilton, Tyler P; Tagliatela, Alicia C; Smolski, William C; Rogers, Stephen L; Jones, Alan M; Meigs, Thomas E

2014-04-01

The G12/13 class of heterotrimeric G proteins, comprising the α-subunits Gα12 and Gα13, regulates multiple aspects of cellular behavior, including proliferation and cytoskeletal rearrangements. Although guanine nucleotide exchange factors for the monomeric G protein Rho (RhoGEFs) are well characterized as effectors of this G protein class, a variety of other downstream targets has been reported. To identify Gα12 determinants that mediate specific protein interactions, we used a structural and evolutionary comparison between the G12/13, Gs, Gi, and Gq classes to identify "class-distinctive" residues in Gα12 and Gα13. Mutation of these residues in Gα12 to their deduced ancestral forms revealed a subset necessary for activation of serum response element (SRE)-mediated transcription, a G12/13-stimulated pathway implicated in cell proliferative signaling. Unexpectedly, this subset of Gα12 mutants showed impaired binding to heat-shock protein 90 (Hsp90) while retaining binding to RhoGEFs. Corresponding mutants of Gα13 exhibited robust SRE activation, suggesting a Gα12-specific mechanism, and inhibition of Hsp90 by geldanamycin or small interfering RNA-mediated lowering of Hsp90 levels resulted in greater downregulation of Gα12 than Gα13 signaling in SRE activation experiments. Furthermore, the Drosophila G12/13 homolog Concertina was unable to signal to SRE in mammalian cells, and Gα12:Concertina chimeras revealed Gα12-specific determinants of SRE activation within the switch regions and a C-terminal region. These findings identify Gα12 determinants of SRE activation, implicate Gα12:Hsp90 interaction in this signaling mechanism, and illuminate structural features that arose during evolution of Gα12 and Gα13 to allow bifurcated mechanisms of signaling to a common cell proliferative pathway.

Degenerate RNA packaging signals in the genome of Satellite Tobacco Necrosis Virus: implications for the assembly of a T=1 capsid.

PubMed

Bunka, David H J; Lane, Stephen W; Lane, Claire L; Dykeman, Eric C; Ford, Robert J; Barker, Amy M; Twarock, Reidun; Phillips, Simon E V; Stockley, Peter G

2011-10-14

Using a recombinant, T=1 Satellite Tobacco Necrosis Virus (STNV)-like particle expressed in Escherichia coli, we have established conditions for in vitro disassembly and reassembly of the viral capsid. In vivo assembly is dependent on the presence of the coat protein (CP) N-terminal region, and in vitro assembly requires RNA. Using immobilised CP monomers under reassembly conditions with "free" CP subunits, we have prepared a range of partially assembled CP species for RNA aptamer selection. SELEX directed against the RNA-binding face of the STNV CP resulted in the isolation of several clones, one of which (B3) matches the STNV-1 genome in 16 out of 25 nucleotide positions, including across a statistically significant 10/10 stretch. This 10-base region folds into a stem-loop displaying the motif ACAA and has been shown to bind to STNV CP. Analysis of the other aptamer sequences reveals that the majority can be folded into stem-loops displaying versions of this motif. Using a sequence and secondary structure search motif to analyse the genomic sequence of STNV-1, we identified 30 stem-loops displaying the sequence motif AxxA. The implication is that there are many stem-loops in the genome carrying essential recognition features for binding STNV CP. Secondary structure predictions of the genomic RNA using Mfold showed that only 8 out of 30 of these stem-loops would be formed in the lowest-energy structure. These results are consistent with an assembly mechanism based on kinetically driven folding of the RNA. Copyright © 2011 Elsevier Ltd. All rights reserved.

Organic aerosols over Indo-Gangetic Plain: Sources, distributions and climatic implications

NASA Astrophysics Data System (ADS)

Singh, Nandita; Mhawish, Alaa; Deboudt, Karine; Singh, R. S.; Banerjee, Tirthankar

2017-05-01

Organic aerosol (OA) constitutes a dominant fraction of airborne particulates over Indo-Gangetic Plain (IGP) especially during post-monsoon and winter. Its exposure has been associated with adverse health effects while there are evidences of its interference with Earth's radiation balance and cloud condensation (CC), resulting possible alteration of hydrological cycle. Therefore, presence and effects of OA directly link it with food security and thereby, sustainability issues. In these contexts, atmospheric chemistry involving formation, volatility and aging of primary OA (POA) and secondary OA (SOA) have been reviewed with specific reference to IGP. Systematic reviews on science of OA sources, evolution and climate perturbations are presented with databases collected from 82 publications available throughout IGP till 2016. Both gaseous and aqueous phase chemical reactions were studied in terms of their potential to form SOA. Efforts were made to recognize the regional variation of OA, its chemical constituents and sources throughout IGP and inferences were made on its possible impacts on regional air quality. Mass fractions of OA to airborne particulate showed spatial variation likewise in Lahore (37 and 44% in fine and coarse fractions, respectively), Patiala (28 and 37%), Delhi (25 and 38%), Kanpur (24 and 30%), Kolkata (11 and 21%) and Dhaka. Source apportionment studies indicate biomass burning, coal combustion and vehicular emissions as predominant OA sources. However, sources represent considerable seasonal variations with dominance of gasoline and diesel emissions during summer and coal and biomass based emissions during winter and post-monsoon. Crop residue burning over upper-IGP was also frequently held responsible for massive OA emission, mostly characterized by its hygroscopic nature, thus having potential to act as CC nuclei. Conclusively, climatic implication of particulate bound OA has been discussed in terms of its interaction with radiation balance.

Serotype-Specific Structural Differences in the Protease-Cofactor Complexes of the Dengue Virus Family

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chandramouli, Sumana; Joseph, Jeremiah S.; Daudenarde, Sophie

With an estimated 40% of the world population at risk, dengue poses a significant threat to human health, especially in tropical and subtropical regions. Preventative and curative efforts, such as vaccine development and drug discovery, face additional challenges due to the occurrence of four antigenically distinct serotypes of the causative dengue virus (DEN1 to -4). Complex immune responses resulting from repeat assaults by the different serotypes necessitate simultaneous targeting of all forms of the virus. One of the promising targets for drug development is the highly conserved two-component viral protease NS2B-NS3, which plays an essential role in viral replication bymore » processing the viral precursor polyprotein into functional proteins. In this paper, we report the 2.1-{angstrom} crystal structure of the DEN1 NS2B hydrophilic core (residues 49 to 95) in complex with the NS3 protease domain (residues 1 to 186) carrying an internal deletion in the N terminus (residues 11 to 20). While the overall folds within the protease core are similar to those of DEN2 and DEN4 proteases, the conformation of the cofactor NS2B is dramatically different from those of other flaviviral apoprotease structures. The differences are especially apparent within its C-terminal region, implicated in substrate binding. The structure reveals for the first time serotype-specific structural elements in the dengue virus family, with the reported alternate conformation resulting from a unique metal-binding site within the DEN1 sequence. We also report the identification of a 10-residue stretch within NS3pro that separates the substrate-binding function from the catalytic turnover rate of the enzyme. Implications for broad-spectrum drug discovery are discussed.« less

An Empirical Review of the Neural Underpinnings of Receiving and Giving Social Support: Implications for Health

PubMed Central

Eisenberger, Naomi I.

2013-01-01

Decades of research have demonstrated strong links between social ties and health. Although considerable evidence has shown that social support can attenuate downstream physiological stress responses that are relevant to health, the neurocognitive mechanisms that translate perceptions of social ties into altered physiological responses are still not fully understood. This review integrates research from social and affective neuroscience to illuminate some of the neural mechanisms involved in social support processes, which may further our understanding of the ways in which social support influence health. This review focuses on two types of social support that have been shown to relate to health: receiving and giving social support. As the neural basis of receiving support, this article reviews the hypothesis that receiving support may benefit health through the activation of neural regions that respond to safety and inhibit threat-related neural and physiological responding. This article will then review neuroimaging studies in which subjects were primed with or received support during a negative experience as well as studies in which self-reports of perceived support were correlated with neural responses to a negative experience. As the neural basis of giving support, this article reviews the hypothesis that neural regions involved in maternal caregiving behavior may be critical for the health benefits of support-giving through the inhibition of threat-related neural and physiological responding. Neuroimaging studies in which subjects provided support to others or engaged in other related forms of prosocial behavior will then be reviewed. Implications of these findings for furthering our understanding of the relationships between social support and health are discussed. PMID:23804014

The Role of Nutrients in Protecting Mitochondrial Function and Neurotransmitter Signaling: Implications for the Treatment of Depression, PTSD, and Suicidal Behaviors.

PubMed

Du, Jing; Zhu, Ming; Bao, Hongkun; Li, Bai; Dong, Yilong; Xiao, Chunjie; Zhang, Grace Y; Henter, Ioline; Rudorfer, Matthew; Vitiello, Benedetto

2016-11-17

Numerous studies have linked severe stress to the development of major depressive disorder (MDD) and suicidal behaviors. Furthermore, recent preclinical studies from our laboratory and others have demonstrated that in rodents, chronic stress and the stress hormone cortisol cause oxidative damage to mitochondrial function and membrane lipids in the brain. Mitochondria play a key role in synaptic neurotransmitter signaling by providing adenosine triphosphate (ATP), mediating lipid and protein synthesis, buffering intracellular calcium, and regulating apoptotic and resilience pathways. Membrane lipids are similarly essential to central nervous system (CNS) function because cholesterol, polyunsaturated fatty acids, and sphingolipids form a lipid raft region, a special lipid region on the membrane that mediates neurotransmitter signaling through G-protein-coupled receptors and ion channels. Low serum cholesterol levels, low antioxidant capacity, and abnormal early morning cortisol levels are biomarkers consistently associated with both depression and suicidal behaviors. In this review, we summarize the manner in which nutrients can protect against oxidative damage to mitochondria and lipids in the neuronal circuits associated with cognitive and affective behaviors. These nutrients include ω3 fatty acids, antioxidants (vitamin C and zinc), members of the vitamin B family (Vitamin B12 and folic acid), and magnesium. Accumulating data have shown that these nutrients can enhance neurocognitive function, and may have therapeutic benefits for depression and suicidal behaviors. A growing body of studies suggests the intriguing possibility that regular consumption of these nutrients may help prevent the onset of mood disorders and suicidal behaviors in vulnerable individuals, or significantly augment the therapeutic effect of available antidepressants. These findings have important implications for the health of both military and civilian populations.

The Role of Nutrients in Protecting Mitochondrial Function and Neurotransmitter Signaling: Implications for the Treatment of Depression, PTSD, and Suicidal Behaviors

PubMed Central

Du, Jing; Zhu, Ming; Bao, Hongkun; Li, Bai; Dong, Yilong; Xiao, Chunjie; Zhang, Grace Y.; Henter, Ioline; Rudorfer, Matthew; Vitiello, Benedetto

2015-01-01

Numerous studies have linked severe stress to the development of major depressive disorder (MDD), and suicidal behaviors. Furthermore, recent preclinical studies from our laboratory and others have demonstrated that in rodents, chronic stress and the stress hormone cortisol has caused oxidative damage to mitochondrial function and membrane lipids in the brain. Mitochondria play a key role in synaptic neurotransmitter signaling by providing adenosine triphosphate (ATP), mediating lipid and protein synthesis, buffering intracellular calcium, and regulating apoptotic and resilience pathways. Membrane lipids are similarly essential to central nervous system (CNS) function, because cholesterol, polyunsaturated fatty acids, and sphingolipids form a lipid raft region, a special lipid region on the membrane that mediates neurotransmitter signaling through G-protein coupled receptors and ion channels. Low serum cholesterol levels, low antioxidant capacity, and abnormal early morning cortisol levels are biomarkers consistently associated with both depression and suicidal behaviors. In this review, we summarize the manner in which nutrients can protect against oxidative damage to mitochondria and lipids in the neuronal circuits associated with cognitive and affective behaviors. These nutrients include ω3 fatty acids, antioxidants (vitamin C and zinc), members of the vitamin B family (Vitamin B12 and folic acid) and magnesium. Accumulating data have shown that these nutrients can enhance neurocognitive function, and may have therapeutic benefits for depression and suicidal behaviors. A growing body of studies suggests the intriguing possibility that regular consumption of these nutrients may help prevent the onset of mood disorders and suicidal behaviors in vulnerable individuals, or significantly augment the therapeutic effect of available antidepressants. These findings have important implications for the health of both military and civilian populations. PMID:25365455

Sarcomeric hypertrophic cardiomyopathy: genetic profile in a Portuguese population.

PubMed

Brito, Dulce; Miltenberger-Miltenyi, Gabriel; Vale Pereira, Sónia; Silva, Doroteia; Diogo, António Nunes; Madeira, Hugo

2012-09-01

Sarcomeric hypertrophic cardiomyopathy has heterogeneous phenotypic expressions, of which sudden cardiac death is the most feared. A genetic diagnosis is essential to identify subjects at risk in each family. The spectrum of disease-causing mutations in the Portuguese population is unknown. Seventy-seven unrelated probands with hypertrophic cardiomyopathy were systematically screened for mutations by PCR and sequencing of five sarcomeric genes: MYBPC3, MYH7, TNNT2, TNNI3 and MYL2. Familial cosegregation analysis was performed in most patients. Thirty-four different mutations were identified in 41 (53%) index patients, 71% with familial hypertrophic cardiomyopathy. The most frequently involved gene was MYBPC3 (66%) with 22 different mutations (8 novel) in 27 patients, followed by MYH7 (22%), TNNT2 (12%) and TNNI3 (2.6%). In three patients (7%), two mutations were found in MYBPC3 and/or MYH7. Additionally, 276 relatives were screened, leading to the identification of a mean of three other affected relatives for each pedigree with the familial form of the disease. Disease-associated mutations were identified mostly in familial hypertrophic cardiomyopathy, corroborating the idea that rarely studied genes may be implicated in sporadic forms. Private mutations are the rule, MYBPC3 being the most commonly involved gene. Mutations in MYBPC3 and MYH7 accounted for most cases of sarcomere-related disease. Multiple mutations in these genes may occur, which highlights the importance of screening both. The detection of novel mutations strongly suggests that all coding regions should be systematically screened. Genotyping in hypertrophic cardiomyopathy enables a more precise diagnosis of the disease, with implications for risk stratification and genetic counseling. Copyright © 2011 Sociedade Portuguesa de Cardiologia. Published by Elsevier España. All rights reserved.

Nanoscale Packing Differences in Sphingomyelin and Phosphatidylcholine Revealed by BODIPY Fluorescence in Monolayers: Physiological Implications

PubMed Central

2015-01-01

Phosphatidycholines (PC) with two saturated acyl chains (e.g., dipalmitoyl) mimic natural sphingomyelin (SM) by promoting raft formation in model membranes. However, sphingoid-based lipids, such as SM, rather than saturated-chain PCs have been implicated as key components of lipid rafts in biomembranes. These observations raise questions about the physical packing properties of the phase states that can be formed by these two major plasma membrane lipids with identical phosphocholine headgroups. To investigate, we developed a monolayer platform capable of monitoring changes in surface fluorescence by acquiring multiple spectra during measurement of a lipid force–area isotherm. We relied on the concentration-dependent emission changes of 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene (BODIPY)-labeled PC to detect nanoscale alterations in lipid packing and phase state induced by monolayer lateral compression. The BODIPY-PC probe contained an indacene ring with four symmetrically located methyl (Me) substituents to enhance localization to the lipid hydrocarbon region. Surface fluorescence spectra indicated changes in miscibility even when force–area isotherms showed no deviation from ideal mixing behavior in the surface pressure versus cross-sectional molecular area response. We detected slightly better mixing of Me4-BODIPY-8-PC with the fluid-like, liquid expanded phase of 1-palmitoyl-2-oleoyl-PC compared to N-oleoyl-SM. Remarkably, in the gel-like, liquid condensed phase, Me4-BODIPY-8-PC mixed better with N-palmitoyl-SM than dipalmitoyl-PC, suggesting naturally abundant SMs with saturated acyl chains form gel-like lipid phase(s) with enhanced ability to accommodate deeply embedded components compared to dipalmitoyl-PC gel phase. The findings reveal a fundamental difference in the lateral packing properties of SM and PC that occurs even when their acyl chains match. PMID:24564829

Comet Dust: The Diversity of "Primitive" Particles and Implications

NASA Technical Reports Server (NTRS)

Wooden, Diane H.; Ishii, Hope A.; Bradley, John P.; Zolensky, Michael E.

2016-01-01

Comet dust is primitive and shows significant diversity. Our knowledge of the properties of primitive particles has expanded significantly through microscale investigations of cosmic dust samples ( IDP's(Interplanetary Dust Particles) and AMM's (Antarctic Micrometeorites)) and of comet dust samples (Stardust and Rosetta's COSIMA), as well as through remote sensing (spectroscopy and imaging) via Spitzer and via spacecraft encounters with 103P/Hartley 2 and 67P/Churyumov-Gerasimenko. Microscale investigations show that comet dust and cosmic dust are particles of unequilibrated materials, including aggregates of materials unequilibrated at submicron scales. We call unequilibrated materials "primitive" and we deduce they were incorporated into ice-rich (H2O-, CO2-, and CO-ice) parent bodies that remained cold, i.e., into comets, because of the lack of aqueous or thermal alteration since particle aggregation; yet some Stardust olivines suggest mild thermal metamorphism. Primitive particles exhibit a diverse range of: structure and typology; size and size distribution of constituents; concentration and form of carbonaceous and organic matter; D-, N-, and O- isotopic enhancements over solar; Mg-, Fe-contents of the silicate minerals; the compositions and concentrations of sulfides, and of less abundant mineral species such as chondrules, CAIs and carbonates. The uniformity within a group of samples points to: aerodynamic sorting of particles and/or particle constituents; the inclusion of a limited range of oxygen fugacities; the inclusion or exclusion of chondrules; a selection of organics. The properties of primitive particles imply there were disk processes that resulted in different comets having particular selections of primitive materials. The diversity of primitive particles has implications for the diversity of materials in the protoplanetary disk present at the time and in the region where the comets formed.

Comet Dust: The Diversity of Primitive Particles and Implications

NASA Technical Reports Server (NTRS)

John Bradley; Zolensky, Michael E.

2016-01-01

Comet dust is primitive and shows significant diversity. Our knowledge of the properties of primitive particles has expanded significantly through microscale investigations of cosmic dust samples (IDPs and AMMs) and of comet dust samples (Stardust and Rosetta's COSIMA), as well as through remote sensing (spectroscopy and imaging) via Spitzer and via spacecraft encounters with 103P/Hartley 2 and 67P/Churyumov-Gerasimenko. Microscale investigations show that comet dust and cosmic dust are particles of unequilibrated materials, including aggregates of materials unequilibrated at submicron scales. We call unequilibrated materials "primitive" and we deduce they were incorporated into ice-­-rich (H2O-, CO2-, and CO-ice) parent bodies that remained cold, i.e., into comets, because of the lack of aqueous or thermal alteration since particle aggregation; yet some Stardust olivines suggest mild thermal metamorphism. Primitive particles exhibit a diverse range of: structure and typology; size and size distribution of constituents; concentration and form of carbonaceous and organic matter; D-, N-, and O- isotopic enhancements over solar; Mg-, Fe-contentsof thesilicate minerals; the compositions and concentrations of sulfides, and of less abundant mineral species such as chondrules, CAIs and carbonates. The unifomity within a group of samples points to: aerodynamic sorting of particles and/or particle constituents; the inclusion of a limited range of oxygen fugacities; the inclusion or exclusion of chondrules; a selection of organics. The properites of primitive particles imply there were disk processes that resulted in different comets having particular selections of primitive materials. The diversity of primitive particles has implications for the diversity of materials in the protoplanetary disk present at the time and in the region where the comets formed.

Single-nucleotide polymorphism in the human mu opioid receptor gene alters beta-endorphin binding and activity: possible implications for opiate addiction.

PubMed

Bond, C; LaForge, K S; Tian, M; Melia, D; Zhang, S; Borg, L; Gong, J; Schluger, J; Strong, J A; Leal, S M; Tischfield, J A; Kreek, M J; Yu, L

1998-08-04

Opioid drugs play important roles in the clinical management of pain, as well as in the development and treatment of drug abuse. The mu opioid receptor is the primary site of action for the most commonly used opioids, including morphine, heroin, fentanyl, and methadone. By sequencing DNA from 113 former heroin addicts in methadone maintenance and 39 individuals with no history of drug or alcohol abuse or dependence, we have identified five different single-nucleotide polymorphisms (SNPs) in the coding region of the mu opioid receptor gene. The most prevalent SNP is a nucleotide substitution at position 118 (A118G), predicting an amino acid change at a putative N-glycosylation site. This SNP displays an allelic frequency of approximately 10% in our study population. Significant differences in allele distribution were observed among ethnic groups studied. The variant receptor resulting from the A118G SNP did not show altered binding affinities for most opioid peptides and alkaloids tested. However, the A118G variant receptor binds beta-endorphin, an endogenous opioid that activates the mu opioid receptor, approximately three times more tightly than the most common allelic form of the receptor. Furthermore, beta-endorphin is approximately three times more potent at the A118G variant receptor than at the most common allelic form in agonist-induced activation of G protein-coupled potassium channels. These results show that SNPs in the mu opioid receptor gene can alter binding and signal transduction in the resulting receptor and may have implications for normal physiology, therapeutics, and vulnerability to develop or protection from diverse diseases including the addictive diseases.

CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference.

PubMed

Hochstrasser, Megan L; Taylor, David W; Bhat, Prashant; Guegler, Chantal K; Sternberg, Samuel H; Nogales, Eva; Doudna, Jennifer A

2014-05-06

In bacteria, the clustered regularly interspaced short palindromic repeats (CRISPR)-associated (Cas) DNA-targeting complex Cascade (CRISPR-associated complex for antiviral defense) uses CRISPR RNA (crRNA) guides to bind complementary DNA targets at sites adjacent to a trinucleotide signature sequence called the protospacer adjacent motif (PAM). The Cascade complex then recruits Cas3, a nuclease-helicase that catalyzes unwinding and cleavage of foreign double-stranded DNA (dsDNA) bearing a sequence matching that of the crRNA. Cascade comprises the CasA-E proteins and one crRNA, forming a structure that binds and unwinds dsDNA to form an R loop in which the target strand of the DNA base pairs with the 32-nt RNA guide sequence. Single-particle electron microscopy reconstructions of dsDNA-bound Cascade with and without Cas3 reveal that Cascade positions the PAM-proximal end of the DNA duplex at the CasA subunit and near the site of Cas3 association. The finding that the DNA target and Cas3 colocalize with CasA implicates this subunit in a key target-validation step during DNA interference. We show biochemically that base pairing of the PAM region is unnecessary for target binding but critical for Cas3-mediated degradation. In addition, the L1 loop of CasA, previously implicated in PAM recognition, is essential for Cas3 activation following target binding by Cascade. Together, these data show that the CasA subunit of Cascade functions as an essential partner of Cas3 by recognizing DNA target sites and positioning Cas3 adjacent to the PAM to ensure cleavage.

Fathoms Below: Propagation of Deep Water-driven Fractures and Implications for Surface Expression and Temporally-varying Activity at Europa

NASA Astrophysics Data System (ADS)

Walker, C. C.; Craft, K.; Schmidt, B. E.

2015-12-01

The fracture and failure of Europa's icy shell are not only observable scars of variable stress and activity throughout its evolution, they also serve key as mechanisms in the interaction of surface and subsurface material, and thus crucial aspects of the study of crustal overturn and ice shell habitability. Galileo images, our best and only reasonable-resolution views of Europa until the Europa Multiple Flyby Mission arrives in the coming decades, illustrates a single snapshot in time in Europa's history from which we deduce many temporally-based hypotheses. One of those hypotheses, which we investigate here, is that sub-surface water-both in the form of Great Lake-sized perched water pockets in the near-surface and the larger global ocean below-drives the deformation, fracture, and failure of the surface. Using Galileo's snapshot in time, we use a 2D/3D hydraulic fracturing model to investigate the propagation of vertical fractures upward into the ice shell, motion of water within and between fractures, and the subsequent break-up of ice over shallow water, forming the chaos regions and other smaller surface features. We will present results from a cohesive fragmentation model to determine the time over which chaos formation occurs, and use a fracking model to determine the time interval required to allow water to escape from basal fractures in the ice shell. In determining the style, energy, and timescale of these processes, we constrain temporal variability in observable activity and topography at the surface. Finally, we compare these results to similar settings on Earth-Antarctica-where we have much higher resolution imagery and observations to better understand how sub-surface water can affect ice surface morphology, which most certainly have implications for future flyby and surface lander exploration.

Subcellular Distribution of M2-muscarinic Receptors in Relation to Dopaminergic Neurons of the Rat Ventral Tegmental Area

PubMed Central

Garzón, Miguel; Pickel, Virginia M.

2008-01-01

Acetylcholine can affect cognitive functions and reward, in part, through activation of muscarinic receptors in the ventral tegmental area (VTA) to evoke changes in mesocorticolimbic dopaminergic transmission. Of the known muscarinic receptor subtypes present in the VTA, the M2 receptor (M2R) is most implicated in autoregulation, and also may play a heteroreceptor role in regulation of the output of the dopaminergic neurons. We sought to determine the functionally relevant sites for M2R activation in relation to VTA dopaminergic neurons by examining the electron microscopic immunolabeling of M2R and the dopamine transporter (DAT) in the VTA of rat brain. The M2R was localized to endomembranes in DAT-containing somatodendritic profiles, but showed a more prominent, size-dependent plasmalemmal location in non-dopaminergic dendrites. M2R also was located on the plasma membrane of morphologically heterogenous axon terminals contacting unlabeled as well as M2R or DAT-labeled dendrites. Some of these terminals formed asymmetric synapses resembling those of cholinergic terminals in the VTA. The majority, however, formed symmetric, inhibitory-type synapses, or were apposed without recognized junctions. Our results provide the first ultrastructural evidence that the M2R is expressed, but largely not available for local activation, on the plasma membrane of VTA dopaminergic neurons. Instead, the M2R in this region has a distribution suggesting more indirect regulation of mesocorticolimbic transmission through autoregulation of acetylcholine release and changes in the physiological activity or release of other, largely inhibitory transmitters. These findings could have implications for understanding the muscarinic control of cognitive and goal-directed behaviors within the VTA. PMID:16927256

Iraq’s Debt Relief: Procedure and Potential Implications for International Debt Relief

DTIC Science & Technology

2008-10-02

Order Code RL33376 Iraq’s Debt Relief: Procedure and Potential Implications for International Debt Relief Updated October 2, 2008 Martin A. Weiss...4. TITLE AND SUBTITLE Iraq?s Debt Relief: Procedure and Potential Implications for International Debt Relief 5a. CONTRACT NUMBER 5b. GRANT NUMBER...b. ABSTRACT unclassified c. THIS PAGE unclassified Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std Z39-18 Iraq’s Debt Relief: Procedure

The British Nuclear Deterrent After the Cold War,

DTIC Science & Technology

1995-01-01

Scope for Further Franco-British Cooperation 86 Attitudes of Friends and Allies 9° 7 . SOME POLICY IMPLICATIONS 94 A " Blessing in Disguise" for...on French decision, and French decision alone." 94 SOME POLICY IMPLICATIONS A " BLESSING IN DISGUISE" FOR EUROPEAN SECURITY It is time to take...but those disposing of any form of "weapon of mass i:LVictor A. Utgoff, "The Biotechnology Revolution and Its Potential Military Implications ," in

Brain Function Overlaps When People Observe Emblems, Speech, and Grasping

PubMed Central

Andric, Michael; Solodkin, Ana; Buccino, Giovanni; Goldin-Meadow, Susan; Rizzolatti, Giacomo; Small, Steven L.

2013-01-01

A hand grasping a cup or gesturing ‘thumbs-up’, while both manual actions, have different purposes and effects. Grasping directly affects the cup, whereas gesturing ‘thumbs-up’ has an effect through an implied verbal (symbolic) meaning. Because grasping and emblematic gestures (‘emblems’) are both goal-oriented hand actions, we pursued the hypothesis that observing each should evoke similar activity in neural regions implicated in processing goal-oriented hand actions. However, because emblems express symbolic meaning, observing them should also evoke activity in regions implicated in interpreting meaning, which is most commonly expressed in language. Using fMRI to test this hypothesis, we had participants watch videos of an actor performing emblems, speaking utterances matched in meaning to the emblems, and grasping objects. Our results show that lateral temporal and inferior frontal regions respond to symbolic meaning, even when it is expressed by a single hand action. In particular, we found that left inferior frontal and right lateral temporal regions are strongly engaged when people observe either emblems or speech. In contrast, we also replicate and extend previous work that implicates parietal and premotor responses in observing goal-oriented hand actions. For hand actions, we found that bilateral parietal and premotor regions are strongly engaged when people observe either emblems or grasping. These findings thus characterize converging brain responses to shared features (e.g., symbolic or manual), despite their encoding and presentation in different stimulus modalities. PMID:23583968

Method of doping organic semiconductors

DOEpatents

Kloc, Christian Leo [Constance, DE; Ramirez, Arthur Penn [Summit, NJ; So, Woo-Young [New Providence, NJ

2012-02-28

A method includes the steps of forming a contiguous semiconducting region and heating the region. The semiconducting region includes polyaromatic molecules. The heating raises the semiconducting region to a temperature above room temperature. The heating is performed in the presence of a dopant gas and the absence of light to form a doped organic semiconducting region.

mGluR5 Ablation in Cortical Glutamatergic Neurons Increases Novelty-Induced Locomotion

PubMed Central

Zhu, Jie; Huang, Jui-Yen; Yu, Dinghui; Justice, Nicholas J.; Lu, Hui-Chen

2013-01-01

The group I metabotropic glutamate receptor 5 (mGluR5) has been implicated in the pathology of various neurological disorders including schizophrenia, ADHD, and autism. mGluR5-dependent synaptic plasticity has been described at a variety of neural connections and its signaling has been implicated in several behaviors. These behaviors include locomotor reactivity to novel environment, sensorimotor gating, anxiety, and cognition. mGluR5 is expressed in glutamatergic neurons, inhibitory neurons, and glia in various brain regions. In this study, we show that deleting mGluR5 expression only in principal cortical neurons leads to defective cannabinoid receptor 1 (CB1R) dependent synaptic plasticity in the prefrontal cortex. These cortical glutamatergic mGluR5 knockout mice exhibit increased novelty-induced locomotion, and their locomotion can be further enhanced by treatment with the psychostimulant methylphenidate. Despite a modest reduction in repetitive behaviors, cortical glutamatergic mGluR5 knockout mice are normal in sensorimotor gating, anxiety, motor balance/learning and fear conditioning behaviors. These results show that mGluR5 signaling in cortical glutamatergic neurons is required for precisely modulating locomotor reactivity to a novel environment but not for sensorimotor gating, anxiety, motor coordination, several forms of learning or social interactions. PMID:23940572

Rapid changes in small fish mercury concentrations in estuarine wetlands: Implications for wildlife risk and monitoring programs

USGS Publications Warehouse

Eagles-Smith, Collin A.; Ackerman, Joshua T.

2009-01-01

Small fish are commonly used to assess mercury (Hg) risk to wildlife and monitor Hg in wetlands. However, limited research has evaluated short-term Hg variability in small fish, which can have important implications for monitoring programs and risk assessment. We conducted a time-series study of Hg concentrations in two small fish species representing benthic (longjaw mudsuckers [Gillichthys mirabilis]) and pelagic (threespine sticklebacks [Gasterosteus aculeatus]) food-webs within three wetland habitats in San Francisco Bay Estuary. We simultaneously monitored prey deliveries, nest initiation, and chick hatching dates of breeding Forster's terns (Sterna forsteri), the most abundant nesting piscivore in the region. Mudsuckers and sticklebacks were the predominant prey fish, comprising 36% and 25% of tern diet, and Hg concentrations averaged (geometric mean ?? SE, ??g/g dw) 0.44 ?? 0.01 and 0.68 ?? 0.03, respectively. Fish Hg concentrations varied substantially over time following a quadratic form in both species, increasing 40% between March and May then decreasing 40% between May and July. Importantly, Forster's terns initiated 68% of nests and 31% of chicks hatched during the period of peak Hg concentrations in prey fish. These results illustrate the importance of short-term temporal variation in small fish Hg concentrations for both Hg monitoring programs and assessing wildlife risk.

EU to review implications of tax

DOE Office of Scientific and Technical Information (OSTI.GOV)

Scott, A.

1997-05-21

The European Council of Ministers has postponed discussion of the European Commission`s proposed energy tax and has authorized a study to reevaluate the technical and legal implications and the costs and benefits of the tax. The reevaluation comes as a ray of hope to European chemical industry officials, who are concerned about the effects of the tax on the industry`s international competitiveness. The commission`s proposal would tax natural gas, electricity, and coal in the European Union (EU) for the first time. It would raise taxes throughout the EU to one level. In its current form the energy tax would devastatemore » the European industry`s competitiveness outside the region, says European Chemical Industry Council (Cefic) counsel Claude Culem. We`re willing to improve emissions to achieve environmental goals - we don`t need energy taxes, Culem tells CW. The whole project is dangerous, not necessarily in the short term, but certainly in the long term. European Parliament ministers are scheduled to debate the issue with the Dutch government, which holds the EU presidency, and hope to wrap up proceedings over the summer. The tax may only be adopted when ministers agree on it unanimously. If it is approved, it would be implemented in two stages, in 2000 and 2002.« less

Driven by excess? Climatic implications of new global mapping of near-surface water-equivalent hydrogen on Mars

NASA Astrophysics Data System (ADS)

Pathare, Asmin V.; Feldman, William C.; Prettyman, Thomas H.; Maurice, Sylvestre

2018-02-01

We present improved Mars Odyssey Neutron Spectrometer (MONS) maps of near-surface Water-Equivalent Hydrogen (WEH) on Mars that have intriguing implications for the global distribution of "excess" ice, which occurs when the mass fraction of water ice exceeds the threshold amount needed to saturate the pore volume in normal soils. We have refined the crossover technique of Feldman et al. (2011) by using spatial deconvolution and Gaussian weighting to create the first globally self-consistent map of WEH. At low latitudes, our new maps indicate that WEH exceeds 15% in several near-equatorial regions, such as Arabia Terra, which has important implications for the types of hydrated minerals present at low latitudes. At high latitudes, we demonstrate that the disparate MONS and Phoenix Robotic Arm (RA) observations of near surface WEH can be reconciled by a three-layer model incorporating dry soil over fully saturated pore ice over pure excess ice: such a three-layer model can also potentially explain the strong anticorrelation of subsurface ice content and ice table depth observed at high latitudes. At moderate latitudes, we show that the distribution of recently formed impact craters is also consistent with our latest MONS results, as both the shallowest ice-exposing crater and deepest non-ice-exposing crater at each impact site are in good agreement with our predictions of near-surface WEH. Overall, we find that our new mapping is consistent with the widespread presence at mid-to-high Martian latitudes of recently deposited shallow excess ice reservoirs that are not yet in equilibrium with the atmosphere.

Production of giant marine diatoms and their export at oceanic frontal zones: Implications for Si and C flux from stratified oceans

NASA Astrophysics Data System (ADS)

Kemp, A. E. S.; Pearce, R. B.; Grigorov, I.; Rance, J.; Lange, C. B.; Quilty, P.; Salter, I.

2006-12-01

From a synthesis of recent oceanic observations and paleo-data it is evident that certain species of giant diatoms including Rhizosolenia spp. Thalassiothrix spp. and Ethmodiscus rex may become concentrated at oceanic frontal zones and subsequently form episodes of mass flux to the sediment. Within the nutrient bearing waters advecting towards frontal boundaries, these species are generally not dominant, but they appear selectively segregated at fronts, and thus may dominate the export flux. Ancient Thalassiothrix diatom mat deposits in the eastern equatorial Pacific and beneath the Polar Front in the Southern Ocean record the highest open ocean sedimentation rates ever documented and represent vast sinks of silica and carbon. Several of the species involved are adapted to a stratified water column and may thrive in Deep Chlorophyll Maxima. Thus in oceanic regions and/or at times prone to enhanced surface water stratification (e.g., during meltwater pulses) they provide a mechanism for generating substantial biomass at depth and its subsequent export with concomitant implications for Si export and C drawdown. This ecology has important implications for ocean biogeochemical models suggesting that more than one diatom "functional type" should be used. In spite of the importance of these giant diatoms for biogeochemical cycling, their large size coupled with the constraints of conventional oceanographic survey schemes and techniques means that they are undersampled. An improved insight into these key species will be an important prerequisite for enhancing our understanding of marine biogeochemical cycling and for assessing the impacts of climate change on ocean export production.

Geochemical modeling of mercury speciation in surface water and implications on mercury cycling in the everglades wetland.

PubMed

Jiang, Ping; Liu, Guangliang; Cui, Wenbin; Cai, Yong

2018-06-01

The geochemical model PHREEQC, abbreviated from PH (pH), RE (redox), EQ (equilibrium), and C (program written in C), was employed on the datasets generated by the USEPA Everglades Regional Environmental Monitoring and Assessment Program (R-EMAP) to determine the speciation distribution of inorganic mercury (iHg) in Everglades water and to explore the implications of iHg speciation on mercury cycling. The results suggest that sulfide and DOM were the key factors that regulate inorganic Hg speciation in the Everglades. When sulfide was present at measurable concentrations (>0.02 mg/L), Hg-S complexes dominated iHg species, occurring in the forms of HgS 2 2- , HgHS 2 - , and Hg(HS) 2 that were affected by a variety of environmental factors. When sulfide was assumed nonexistent, Hg-DOM complexes occurred as the predominant Hg species, accounting for almost 100% of iHg species. However, when sulfide was presumably present at a very low, environmentally relevant concentration (3.2 × 10 -7  mg/L), both Hg-DOM and Hg-S complexes were present as the major iHg species. These Hg-S species and Hg-DOM complex could be related to methylmercury (MeHg) in environmental matrices such floc, periphyton, and soil, and the correlations are dependent upon different circumstances (e.g., sulfide concentrations). The implications of the distribution of iHg species on MeHg production and fate in the Everglades were discussed. Copyright © 2018 Elsevier B.V. All rights reserved.

Thermo-Compositional Evolution of a Brine Reservoir Beneath Ceres' Occator Crater and Implications for Cryovolcanism at the Surface

NASA Astrophysics Data System (ADS)

Quick, L. C.

2017-12-01

The Dawn spacecraft has imaged several putative cryovolcanic features on Ceres (Buczkowski et al., 2016; Ruesch et al., 2016), and several lines of evidence point to past cryovolcanic activity at Occator crater (De Sanctis et al., 2016; Krohn et al., 2016; Buczkowski et al., 2017; Nathues et al., 2017; Ruesch et al., 2017; Zolotov, 2017). Hence it is possible that cryovolcanism played a key role in delivering carbonate and/or chloride brines to Ceres' surface in the past. As any cryolavas delivered to the surface would have issued from a briny subsurface reservoir, or, cryomagma chamber, it is necessary to consider the thermal and compositional evolution of such a reservoir. The detection of a 200 km x 200 km negative Bouguer anomaly beneath Occator suggests the presence of a low-density region beneath the crater (Ermakov et al., 2017). If this region is a residual cryomagma chamber, excess pressures caused by its gradual freezing, or stresses produced by the Occator-forming impact, could have once facilitated the delivery of cryolavas to the Cerean surface. I have investigated the progressive solidification of a cryomagma chamber beneath Occator and implications for the changing compositions of cryolavas on Ceres. I will present the results of this study as well as discuss the dynamics and heat transfer associated with cryomagmatic ascent to the surface. Preliminary results suggest that a 200 km wide cryomagma chamber situated beneath Ceres' crust would take approximately 1 Gyr to completely crystallize. However, such a reservoir would be depleted in chloride and carbonate salts after only 54 Myr of cooling. If the reservoir contained NH3-bearing fluids, eruptions could proceed for another 100 Myr before increased reservoir crystallization rendered cryomagmatic fluids completely immobile. In addition, it is likely that cryomagmas delivered to Ceres' surface had viscosities < 108 Pa s, and were delivered in fractures with propagation speeds ≥ 10-5 m/s. I will review these results in detail, as well as discuss the behavior of cryolavas after extrusion onto Ceres' surface, and implications for the emplacement of the Vinalia Faculae.

Unique LCR variations among lineages of HPV16, 18 and 45 isolates from women with normal cervical cytology in Ghana.

PubMed

Awua, Adolf K; Adanu, Richard M K; Wiredu, Edwin K; Afari, Edwin A; Zubuch, Vanessa A; Asmah, Richard H; Severini, Alberto

2017-04-21

In addition to being useful for classification, sequence variations of human Papillomavirus (HPV) genotypes have been implicated in differential oncogenic potential and a differential association with the different histological forms of invasive cervical cancer. These associations have also been indicated for HPV genotype lineages and sub-lineages. In order to better understand the potential implications of lineage variation in the occurrence of cervical cancers in Ghana, we studied the lineages of the three most prevalent HPV genotypes among women with normal cytology as baseline to further studies. Of previously collected self- and health personnel-collected cervical specimen, 54, which were positive for HPV16, 18 and 45, were selected and the long control region (LCR) of each HPV genotype was separately amplified by a nested PCR. DNA sequences of 41 isolates obtained with the forward and reverse primers by Sanger sequencing were analysed. Nucleotide sequence variations of the HPV16 genotypes were observed at 30 positions within the LCR (7460 - 7840). Of these, 19 were the known variations for the lineages B and C (African lineages), while the other 11 positions had variations unique to the HPV16 isolates of this study. For the HPV18 isolates, the variations were at 35 positions, 22 of which were known variations of Africa lineages and the other 13 were unique variations observed for the isolates obtained in this study (at positions 7799 and 7813). HPV45 isolates had variations at 35 positions and 2 (positions 7114 and 97) were unique to the isolates of this study. This study provides the first data on the lineages of HPV 16, 18 and 45 isolates from Ghana. Although the study did not obtain full genome sequence data for a comprehensive comparison with known lineages, these genotypes were predominately of the Africa lineages and had some unique sequence variations at positions that suggest potential oncogenic implications. These data will be useful for comparison with lineages of these genotypes from women with cervical lesion and all the forms of invasive cervical cancers.

Rural Policy and the New Regional Economics: Implications for Rural America.

ERIC Educational Resources Information Center

Quigley, John M.

This paper discusses gross economic and demographic trends in rural and urban America during the past 30 years, the kinds of competitive advantages enjoyed by urban and rural regions, and insights offered by the new regional economics concerning exploitation of those advantages. The importance of agriculture has declined in rural areas, while that…

Adipose and muscle tissue expression of two genes (NCAPG and LCORL) located in a chromosomal region associated with cattle feed intake and gain

USDA-ARS?s Scientific Manuscript database

A region on bovine chromosome 6 has been implicated in cattle birth weight, growth, and length. Non-SMC conodensin I complex subunit G (NCAPG) and ligand dependent nuclear receptor corepressor-like protein (LCORL) are positional candidate genes within this region. We previously identified genetic ...

2015 Wallace Foundation Distinguished Lecture: Anonymity No More: Seeing Our Neighbors in Ferguson and the Implications for Social Policy

ERIC Educational Resources Information Center

Tate, William F.; Jones, Brittni D.

2017-01-01

Ferguson, Missouri, has been characterized as an archetype of structural inequality and segregation. Several questions guide this investigation of Ferguson and its surrounding region. How did policies, practices, and folkways help to create the conditions in Ferguson and the broader metropolitan region? The regional segregation regime's history…

Interaction between Ailanthus altissima and Native Robinia pseudoacacia in Early Succession: Implications for Forest Management

Treesearch

Erik Nilsen; Cynthia Huebner; David Carr; Zhe Bao

2018-01-01

The goal of this study was to discover the nature and intensity of the interaction between an exotic invader Ailanthus altissima (Mill.) Swingle and its coexisting native Robinia pseudoacacia L. and consider management implications. The study occurred in the Mid-Appalachian region of the eastern United States. ...

Seventy Years of Forest Change in the Northern Great Lakes Region, USA

Treesearch

Lisa A. Schulte; Thomas R. Crow; Dave Cleland

2003-01-01

The rates and magnitudes of forest change have important social and economic implications. We address facets of change associated with 20th century recovery of the U.S. Lake States (Michigan, Wisconsin, and Minnesota) forests from the Great Cutover, and discuss ecological and socioeconomic implications for future forest resources.

New Forms of Citizenship, European Construction and the Reconfiguration of the University

ERIC Educational Resources Information Center

Stoer, Stephen

2006-01-01

This article examines the impact of new forms of citizenship and European construction on the university. If one conceives new forms of citizenship as identity-driven, rather than based on territory, and European construction as the intertwining of four metaphors (the flag, association, the network and the bazaar), what are the implications for a…

Grading A-Level Double Subject Mathematicians and the Implications for Selection.

ERIC Educational Resources Information Center

Newbould, Charles A.

1981-01-01

Test data were used to compare the grading of two forms of double mathematics: pure and applied math, and regular and advanced math. Results confirm expectations that in the former system, the grading is comparable, and in the latter, it is not necessarily comparable. Implications for student admission are discussed. (MSE)

The Arnold-Chiari Malformation and Its Implications for Individuals with Spina Bifida and Hydrocephalus.

ERIC Educational Resources Information Center

Mittler, Joel E.

1986-01-01

The Arnold-Chiari malformation is present in most infants born with myelomeningocele (a form of spina bifida) and hydrocephalus. The syndrome is responsible for structural abnormalities in the brain, and peripheral nervous system. Etiology, symptoms, impact on central nervous system structures, surgical treatment, and implications for education…

Ancient Athenian Democratic Knowledge and Citizenship: Connectivity and Intercultural Implications

ERIC Educational Resources Information Center

Gundara, Jagdish S.

2011-01-01

This paper explores the implications that ancient Athens had for modern representative democracies and the links that can be made to the philosophical principles that form the essence of intercultural education. Such an exploration shows that modern democratic societies have ignored many key aspects of the important legacy left to us by these…

Wildlife-associated recreation in the North Central Region: participation patterns and management implications

Treesearch

Allan Marsinko; John Dwyer

2002-01-01

The North Central Region (IA, IL, IN, MI, MN, MO, WI) is a diverse area of the United States. Compared to the remainder of the country, the region as a whole is demographically similar in terms of mean age, education, household income, and gender. However, the North Central region has a higher proportion of Whites and a slightly lower proportion of people residing in...

Land Use and Land Cover Changes 1977 to 2000 in the Steppe Region of Ukraine, and Preliminary Results of Evaluating its Ecological and Land Form Implications

NASA Astrophysics Data System (ADS)

White, G. J.; Prydatko, V.; Luhmann, E. P.

2001-05-01

Ukraine's history as agro-economic region dates back hundreds of years, being the most productive portion of the "black earth region" for the now defunct Soviet Union. This incredible level of agricultural production brought tremendous changes to the landscape matrix, largely eliminating forests and prairie systems from the southern steppe regions of Ukraine. The age of industrialization has had far less significant impacts to the land use patterns as large farms were operated and managed under Soviet Era cooperatives. The recent, 1992, independence of Ukraine has brought new pressures to the landscape. These pressures are initiated by economic needs of Ukraine seeking to be resolved through increased farm production and rapid land and industrial privatization. This study examines land cover changes between 1977, 1988 and 2000 within a representative region of southern Ukraine and northern Crimea. The region covers prototypical landscapes of the steppe region of agriculture at various scales and crops. The study area also allows an examination of changes along coastal areas in the Azov and Black Seas, specifically barrier systems. Additionally, areas of rapid privatization of industries and introduction of western industries exist within this region. The years selected for documentation were chosen as being one near the height of Soviet autonomy, near separation of the Soviet Union and independence of Ukraine and current times. The study looks at ways of documenting land cover change using satellite imagery with ancillary ground based information. The study evaluates effects of these land cover changes through associated losses of hydrologic characteristics in the landscape such as stream, as well as landform changes especially in coastal barrier systems. These changes are correlated to landscape changes and ecological parameters recorded during this nearly 30 year period. Preliminary conclusions are presented as to alternative land use practices and actions for stabilization of the remaining "natural" landscape and protection of near coastal systems especially barrier systems.

Urban Climate, Ozone Formation, and Public Health: Should Heat be Regulated as a Traditional Air Pollutant?

NASA Astrophysics Data System (ADS)

Stone, B.

2003-12-01

The return of record breaking heat waves to North American and European cities in 2003 highlights the growing need for urban planners to develop heat mitigation strategies for large metropolitan regions. Long associated with public health through its effects on human heat stress and heat related mortality, rising urban temperatures also hold important implications for regional air quality. This presentation will outline the results of a study focused on the relationship between regional temperatures and annual tropospheric ozone exceedances in the fifty largest (by population) metropolitan regions in the United States. With the aid of data from the EPA's National Emissions Inventory and NASA's Earth Observing System Data and Information System, this study examines trends in metropolitan emissions of nitrogen oxides, volatile organic compounds, mean regional temperatures, and annual ozone exceedances in U.S. metropolitan regions for the years 1990 through 1999. The intent of this work is to better establish connections between recent trends urban climate and ozone formation and to explore policy approaches to mitigating urban temperatures through physical planning. The results of this research indicate that annual violations of the national ozone standard during the decade of the 1990s were more closely associated with regional temperatures than with the emissions of regulated ozone precursors from mobile and stationary sources. Based on the results of this analysis, I argue that the air quality management strategies outlined in the Clean Air Act may be proving insufficient to control ozone formation due to ongoing and unanticipated changes in global and regional climate. I further argue that the emergence of urban heat as a significant threat to human health demands a strategic response from the fields of urban planning and public health. The presentation will conclude with a discussion of the linkages between urban form and ambient heat and will outline a set of policy approaches that have proven successful in mitigating urban heat production.

Identification of coding and non-coding mutational hotspots in cancer genomes.

PubMed

Piraino, Scott W; Furney, Simon J

2017-01-05

The identification of mutations that play a causal role in tumour development, so called "driver" mutations, is of critical importance for understanding how cancers form and how they might be treated. Several large cancer sequencing projects have identified genes that are recurrently mutated in cancer patients, suggesting a role in tumourigenesis. While the landscape of coding drivers has been extensively studied and many of the most prominent driver genes are well characterised, comparatively less is known about the role of mutations in the non-coding regions of the genome in cancer development. The continuing fall in genome sequencing costs has resulted in a concomitant increase in the number of cancer whole genome sequences being produced, facilitating systematic interrogation of both the coding and non-coding regions of cancer genomes. To examine the mutational landscapes of tumour genomes we have developed a novel method to identify mutational hotspots in tumour genomes using both mutational data and information on evolutionary conservation. We have applied our methodology to over 1300 whole cancer genomes and show that it identifies prominent coding and non-coding regions that are known or highly suspected to play a role in cancer. Importantly, we applied our method to the entire genome, rather than relying on predefined annotations (e.g. promoter regions) and we highlight recurrently mutated regions that may have resulted from increased exposure to mutational processes rather than selection, some of which have been identified previously as targets of selection. Finally, we implicate several pan-cancer and cancer-specific candidate non-coding regions, which could be involved in tumourigenesis. We have developed a framework to identify mutational hotspots in cancer genomes, which is applicable to the entire genome. This framework identifies known and novel coding and non-coding mutional hotspots and can be used to differentiate candidate driver regions from likely passenger regions susceptible to somatic mutation.

Chalcogenide Glasses. Part 3. Chalcogenide Glass-Forming Systems.

DTIC Science & Technology

1986-02-01

34.L •. - . . . . . . . . ....... * .- . -.. . .. .. 8. Ti - As - S 31 9. As - Sb - S and As - Sb - Se 37 10. As - Halogen - (S, Se or Te) 40 11. As...Glass Forming Region and Tg in Ge-Sb-Se System 54[Ref. 40 ] 30 Glass Forming Region in Ge-Bi-S System [Ref.78] 55 31 Glass Forming Region in Ge-Bi-Se...poise), indicating the presence of tellurium chains. * p.° ~ -7 .. . *. 2. . * . . -~ ?’ ~ ~ - .. -~. r; - - - -•.~ ~ ~ ~ ~ * . 40 However, it rapidly

Sequences with high propensity to form G-quartet structures in kinetoplast DNA from Phytomonas serpens.

PubMed

Sá-Carvalho, D; Traub-Cseko, Y M

1995-06-01

Naturally occurring sequences containing repetitive guanine motifs have the potential to form tetraplex DNA. Phytomonas serpens minicircle DNA shows some regions where one strand is composed mainly of G and T (GT regions). These regions contain several stretches of contiguous guanines. An oligonucleotide was constructed with the sequence corresponding to one of these regions (Phyto-GT). It was demonstrated by native gel electrophoresis and methylation protection that Phyto-GT forms tetramolecular (G4), bimolecular (G'2) and unimolecular (G4') structures stabilized through G-quartets. Tetraplex DNA formation by this sequence could have biological relevance as it can be formed in physiological conditions and GT regions comprise approximately one-third of P. serpens and Crithidia oncopelti minicircles.

Russian Military Reform From Perestroika to Putin: Implications for U.S. Policy

DTIC Science & Technology

2004-04-01

AU/AF FELLOWS/NNN/2004-00 AIR FORCE FELLOWS (SDE) AIR UNIVERSITY RUSSIAN MILITARY REFORM FROM PERESTROIKA TO PUTIN: IMPLICATIONS FOR U.S...TITLE AND SUBTITLE Russian Military Reform : From Perestroika to Putin: Implications for U.S. Policy 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM...kept the troops in place at the request of the leaders of the breakaway regions. 5 Major Scott C. Dullea, “ Russian Military Reform : Lessons from America

A Role for Oxytocin-Like Receptor in Social Habituation in a Teleost.

PubMed

Weitekamp, Chelsea A; Solomon-Lane, Tessa K; Del Valle, Pamela; Triki, Zegni; Nugent, Bridget M; Hofmann, Hans A

2017-01-01

Oxytocin (OT) mediates social habituation in rodent model systems, but its role in mediating this effect in other vertebrates is unknown. We used males of the African cichlid fish, Astatotilapia burtoni, to investigate two aspects of isotocin (IT; an OT homolog) signaling in social habituation. First, we examined the expression of IT receptor 2 (ITR2) as well as two immediate early genes in brain regions implicated in social recognition. Next, we examined IT neuron activity using immunohistochemistry. Patterns of gene expression in homologs of the amygdala and hippocampus implicate IT signaling in these regions in social habituation to a territorial neighbor. In the preoptic area, the expression of the ITR2 subtype and IT neuron activity respond to the presence of a male, independent of familiarity. Our results implicate IT in mediating social habituation in a teleost. © 2017 S. Karger AG, Basel.

Implications of changing water cycle for the performance and yield characteristics of the multi-purpose Beas Reservoir in India

NASA Astrophysics Data System (ADS)

Adeloye, A. J.; Ojha, C. S.; Soundharajan, B.; Remesan, R.

2013-12-01

There is considerable change in both the spatial and temporal patterns of monsoon rainfall in India, with implications for water resources availability and security. 'Mitigating the Impacts of Climate Change on India Agriculture' (MICCI) is one of five on-going scientific efforts being sponsored as part of the UK-NERC/India-MOES Changing Water Cycle (South Asia) initiative to further the understanding of the problem and proffer solutions that are robust and effective. This paper focuses on assessing the implications of projected climate change on the yield and performance characteristics of the Pong Reservoir on the Beas River, Himachal Pradesh, India. The Pong serves both hydropower and irrigation needs and is therefore strategic for the socio-economic well-being of the region as well as sustaining the livelihoods of millions of farmers that rely on it for irrigation. Simulated baseline and climate-change perturbed hydro-climate scenarios developed as part of a companion Work Package of MICCI formed the basis of the analysis. For both of these scenarios, reservoir analyses were carried out using the Sequent Peak Algorithm (SPA) and Pong's existing level of releases to derive rule curves for the reservoir. These rule curves then formed the basis of further reservoir behaviour simulations in WEAP and the resulting performance of the reservoir was summarised in terms of reliability, resilience, vulnerability and sustainability. The whole exercise was implemented within a Monte Carlo framework for the benefit of characterising the variability in the assessments. The results show that the rule curves developed using future hydro-climate are significantly changed from the baseline in that higher storages will be required to be maintained in the Pong in the future to achieve reliable performance. As far as the overall performance of the reservoir is concerned, future reliability (both time-based and volume-based) is not significantly different from the baseline, provided the future simulations adopt the future rule curves. This is, however, not the case with the resilience, with the future hydro-climate resulting in a less resilient system when compared with the baseline. The resilience is the ability of the system to recover from a hydrological failure; consequently, lower resilience for the future systems is an indication that longer, continuous failure periods are likely with implications for the two purposes of the reservoir. For example, extended periods of water scarcity that may result from a low resilient system will mean that crops are likely to experience longer periods of water stress with implications for crop yields. In such situations, better operational practices that manage the available water through hedging and irrigation water scheduling will be required. Other interventions may include the introduction of water from other sources, e.g. groundwater.

Mitochondrial control region haplotypes of the South American sea lion Otaria flavescens (Shaw, 1800).

PubMed

Artico, L O; Bianchini, A; Grubel, K S; Monteiro, D S; Estima, S C; Oliveira, L R de; Bonatto, S L; Marins, L F

2010-09-01

The South American sea lion, Otaria flavescens, is widely distributed along the Pacific and Atlantic coasts of South America. However, along the Brazilian coast, there are only two nonbreeding sites for the species (Refúgio de Vida Silvestre da Ilha dos Lobos and Refúgio de Vida Silvestre do Molhe Leste da Barra do Rio Grande), both in Southern Brazil. In this region, the species is continuously under the effect of anthropic activities, mainly those related to environmental contamination with organic and inorganic chemicals and fishery interactions. This paper reports, for the first time, the genetic diversity of O. flavescens found along the Southern Brazilian coast. A 287-bp fragment of the mitochondrial DNA control region (D-loop) was analyzed. Seven novel haplotypes were found in 56 individuals (OFA1-OFA7), with OFA1 being the most frequent (47.54%). Nucleotide diversity was moderate (π = 0.62%) and haplotype diversity was relatively low (67%). Furthermore, the median joining network analysis indicated that Brazilian haplotypes formed a reciprocal monophyletic clade when compared to the haplotypes from the Peruvian population on the Pacific coast. These two populations do not share haplotypes and may have become isolated some time back. Further genetic studies covering the entire species distribution are necessary to better understand the biological implications of the results reported here for the management and conservation of South American sea lions.

Molecular packing in virus crystals: geometry, chemistry, and biology.

PubMed

Natarajan, P; Johnson, J E

1998-01-01

An automated procedure was developed to determine the geometrical and chemical interactions of crystalline virus particles using the crystal parameters, particle position, orientation, and atomic coordinates for an icosahedral asymmetric unit. Two applications of the program are reported: (1) An analysis of a novel pseudo-rhombohedral (R32) symmetry present in the monoclinic crystal lattices of both Nodamura Virus (NOV) and Coxsackie virus B3 (CVB3). The study shows that in both cases the interactions between particles is substantially increased by minor deviations from exact R32 symmetry and that only particles with the proper ratio of dimensions along twofold and fivefold symmetry axes (such as southern bean mosaic virus) can achieve comparable buried surface area in the true R32 space group. (2) An attempt was made to correlate biological function with remarkably conserved interparticle contact regions found in different crystal forms of three members of the nodavirus family, NOV, Flock House Virus (FHV), and Black Beetle Virus (BBV). Mutational evidence implicates the quasi-threefold region on the viral surface in receptor binding in nodaviruses and this region is dominant in particle contacts in all three virus crystals. Examination of particle contacts in numerous crystal structures of viruses in the picornavirus super-family showed that portions of the capsid surface known to interact with a receptor or serve as an epitope for monoclonal antibodies frequently stabilize crystal contacts.

Regional landslide hazard assessment in a deep uncertain future

NASA Astrophysics Data System (ADS)

Almeida, Susana; Holcombe, Liz; Pianosi, Francesca; Wagener, Thorsten

2017-04-01

Landslides have many negative economic and societal impacts, including the potential for significant loss of life and damage to infrastructure. These risks are likely to be exacerbated in the future by a combination of climatic and socio-economic factors. Climate change, for example, is expected to increase the occurrence of rainfall-triggered landslides, because a warmer atmosphere tends to produce more high intensity rainfall events. Prediction of future changes in rainfall, however, is subject to high levels of uncertainty, making it challenging for decision-makers to identify the areas and populations that are most vulnerable to landslide hazards. In this study, we demonstrate how a physically-based model - the Combined Hydrology and Stability Model (CHASM) - can be used together with Global Sensitivity Analysis (GSA) to explore the underlying factors controlling the spatial distribution of landslide risks across a regional landscape, while also accounting for deep uncertainty around future rainfall conditions. We demonstrate how GSA can used to analyse CHASM which in turn represents the spatial variability of hillslope characteristics in the study region, while accounting for other uncertainties. Results are presented in the form of landslide hazard maps, utilising high-resolution digital elevation datasets for a case study in St Lucia in the Caribbean. Our findings about spatial landslide hazard drivers have important implications for data collection approaches and for long-term decision-making about land management practices.

Regional Landslide Hazard Assessment Considering Potential Climate Change

NASA Astrophysics Data System (ADS)

Almeida, S.; Holcombe, E.; Pianosi, F.; Wagener, T.

2016-12-01

Landslides have many negative economic and societal impacts, including the potential for significant loss of life and damage to infrastructure. These risks are likely to be exacerbated in the future by a combination of climatic and socio-economic factors. Climate change, for example, is expected to increase the occurrence of rainfall-triggered landslides, because a warmer atmosphere tends to produce more high intensity rainfall events. Prediction of future changes in rainfall, however, is subject to high levels of uncertainty, making it challenging for decision-makers to identify the areas and populations that are most vulnerable to landslide hazards. In this study, we demonstrate how a physically-based model - the Combined Hydrology and Stability Model (CHASM) - can be used together with Global Sensitivity Analysis (GSA) to explore the underlying factors controlling the spatial distribution of landslide risks across a regional landscape, while also accounting for deep uncertainty around potential future rainfall triggers. We demonstrate how GSA can be used to analyse CHASM which in turn represents the spatial variability of hillslope characteristics in the study region, while accounting for other uncertainties. Results are presented in the form of landslide hazard maps, utilising high-resolution digital elevation datasets for a case study in St Lucia in the Caribbean. Our findings about spatial landslide hazard drivers have important implications for data collection approaches and for long-term decision-making about land management practices.

Mineralogy of Antarctica Dry Valley Soils: Implications for Pedogenic Processes on Mars

NASA Technical Reports Server (NTRS)

Quinn, J. E.; Ming, D. W.; Morris, R. V.; Douglas, S.; Kounaves, S. P.; McKay, C. P.; Tamppari, L, K.; Smith, P. H.; Zent, A. P.; Archer, P. D., Jr.

2010-01-01

The Antarctic Dry Valleys (ADVs) located in the Transantarctic Mountains are the coldest and driest locations on Earth. The mean annual air temperature is -20 C or less and the ADVs receive 100mm or less of precipitation annually in the form of snow. The cold and dry climate in the ADVs is one of the best terrestrial analogs for the climatic conditions on Mars [2]. The soils in the ADVs have been categorized into three soil moisture zones: subxerous, xerous and ultraxerous. The subxerous zone is a coastal region in which soils have ice-cemented permafrost relatively close to the surface. Moisture is available in relatively large amounts and soil temperatures are above freezing throughout the soil profile (above ice permafrost) in summer months. The xerous zone, the most widespread of the three zones, is an inland region with a climate midway between the subxerous and ultraxerous. The soils from this zone have dry permafrost at moderate depths (30-75cm) but have sufficient water in the upper soil horizons to allow leaching of soluble materials. The ultraxerous zone is a high elevation zone, where both temperature and precipitation amounts are very low resulting in dry permafrost throughout the soil profile. The three moisture regime regions are similar to the three microclimatic zones (coastal thaw, inland mixed, stable upland) defined by Marchant and Head.

Temperature extremes: geographic patterns, recent changes, and implications for organismal vulnerabilities.

PubMed

Buckley, Lauren B; Huey, Raymond B

2016-12-01

Extreme temperatures can injure or kill organisms and can drive evolutionary patterns. Many indices of extremes have been proposed, but few attempts have been made to establish geographic patterns of extremes and to evaluate whether they align with geographic patterns in biological vulnerability and diversity. To examine these issues, we adopt the CLIMDEX indices of thermal extremes. We compute scores for each index on a geographic grid during a baseline period (1961-1990) and separately for the recent period (1991-2010). Heat extremes (temperatures above the 90th percentile during the baseline period) have become substantially more common during the recent period, particularly in the tropics. Importantly, the various indices show weak geographic concordance, implying that organisms in different regions will face different forms of thermal stress. The magnitude of recent shifts in indices is largely uncorrelated with baseline scores in those indices, suggesting that organisms are likely to face novel thermal stresses. Organismal tolerances correlate roughly with absolute metrics (mainly for cold), but poorly with metrics defined relative to local conditions. Regions with high extreme scores do not correlate closely with regions with high species diversity, human population density, or agricultural production. Even though frequency and intensity of extreme temperature events have - and are likely to have - major impacts on organisms, the impacts are likely to be geographically and taxonomically idiosyncratic and difficult to predict. © 2016 John Wiley & Sons Ltd.

Mammalian prions

PubMed Central

Salamat, Muhammad Khalid; Munoz-Montesino, Carola; Moudjou, Mohammed; Rezaei, Human; Laude, Hubert; Béringue, Vincent; Dron, Michel

2013-01-01

Upon prion infection, abnormal prion protein (PrPSc) self-perpetuate by conformational conversion of α-helix-rich PrPC into β sheet enriched form, leading to formation and deposition of PrPSc aggregates in affected brains. However the process remains poorly understood at the molecular level and the regions of PrP critical for conversion are still debated. Minimal amino acid substitutions can impair prion replication at many places in PrP. Conversely, we recently showed that bona fide prions could be generated after introduction of eight and up to 16 additional amino acids in the H2-H3 inter-helix loop of PrP. Prion replication also accommodated the insertions of an octapeptide at different places in the last turns of H2. This reverse genetic approach reveals an unexpected tolerance of prions to substantial sequence changes in the protease-resistant part which is associated with infectivity. It also demonstrates that conversion does not require the presence of a specific sequence in the middle of the H2-H3 area. We discuss the implications of our findings according to different structural models proposed for PrPSc and questioned the postulated existence of an N- or C-terminal prion domain in the protease-resistant region. PMID:23232499

Effects of early life stress on amygdala and striatal development

PubMed Central

Fareri, Dominic S.; Tottenham, Nim

2016-01-01

Species-expected caregiving early in life is critical for the normative development and regulation of emotional behavior, the ability to effectively evaluate affective stimuli in the environment, and the ability to sustain social relationships. Severe psychosocial stressors early in life (early life stress; ELS) in the form of the absence of species expected caregiving (i.e., caregiver deprivation), can drastically impact one’s social and emotional success, leading to the onset of internalizing illness later in life. Development of the amygdala and striatum, two key regions supporting affective valuation and learning, is significantly affected by ELS, and their altered developmental trajectories have important implications for cognitive, behavioral and socioemotional development. However, an understanding of the impact of ELS on the development of functional interactions between these regions and subsequent behavioral effects is lacking. In this review, we highlight the roles of the amygdala and striatum in affective valuation and learning in maturity and across development. We discuss their function separately as well as their interaction. We highlight evidence across species characterizing how ELS induced changes in the development of the amygdala and striatum mediate subsequent behavioral changes associated with internalizing illness, positing a particular import of the effect of ELS on their interaction. PMID:27174149

The Fossil Record of Two-phase Galaxy Assembly: Kinematics and Metallicities in the Nearest S0 Galaxy

NASA Astrophysics Data System (ADS)

Arnold, Jacob A.; Romanowsky, Aaron J.; Brodie, Jean P.; Chomiuk, Laura; Spitler, Lee R.; Strader, Jay; Benson, Andrew J.; Forbes, Duncan A.

2011-08-01

We present a global analysis of kinematics and metallicity in the nearest S0 galaxy, NGC 3115, along with implications for its assembly history. The data include high-quality wide-field imaging from Suprime-Cam on the Subaru telescope, and multi-slit spectra of the field stars and globular clusters (GCs) obtained using Keck-DEIMOS/LRIS and Magellan-IMACS. Within two effective radii, the bulge (as traced by the stars and metal-rich GCs) is flattened and rotates rapidly (v/σ >~ 1.5). At larger radii, the rotation declines dramatically to v/σ ~ 0.7, but remains well aligned with the inner regions. The radial decrease in characteristic metallicity of both the metal-rich and metal-poor GC subpopulations produces strong gradients with power-law slopes of -0.17 ± 0.04 and -0.38 ± 0.06 dex dex-1, respectively. We argue that this pattern is not naturally explained by a binary major merger, but instead by a two-phase assembly process where the inner regions have formed in an early violent, dissipative phase, followed by the protracted growth of the outer parts via minor mergers with typical mass ratios of ~15-20:1.