Chesapeake Bay recovery and factors affecting trends: Long-termmonitoring, indicators, and insights

USGS Publications Warehouse

Tango, Peter J.; Batiuk, Richard A.

2016-01-01

Monitoring the outcome of restoration efforts is the only way to identify the status of a recovery and the most effective management strategies. In this paper, we discuss Chesapeake Bay and watershed recovery and factors influencing water quality trends. For over 30 years, the Chesapeake Bay Program Partnership’s long-term tidal and watershed water quality monitoring networks have measured physical, chemical and biological parameters throughout the bay and its surrounding watershed underpinning an adaptive management process to drive ecosystem recovery. There are many natural and anthropogenic factors operating and interacting to affect the watershed and bay water quality recovery responses to management actions. Across habitats and indicators, the bay and its watershed continue to express a diverse spatial and temporal fabric of multiscale conditions, stressors and trends that show a range of health conditions and impairments, as well as evidence of progress and degradation. Recurrent independent reviews of the monitoring program have driven a culture of continued adaptation of the monitoring networks to reflect ever evolving management information needs. The adherence to bay and watershed-wide consistent monitoring protocols provides monitoring data supporting analyses and development of scientific syntheses that underpin indicator and model development, regulatory assessments, targeting of management actions, evaluation of management effectiveness, and directing of priorities and policies.

Using Bayes factors for multi-factor, biometric authentication

NASA Astrophysics Data System (ADS)

Giffin, A.; Skufca, J. D.; Lao, P. A.

2015-01-01

Multi-factor/multi-modal authentication systems are becoming the de facto industry standard. Traditional methods typically use rates that are point estimates and lack a good measure of uncertainty. Additionally, multiple factors are typically fused together in an ad hoc manner. To be consistent, as well as to establish and make proper use of uncertainties, we use a Bayesian method that will update our estimates and uncertainties as new information presents itself. Our algorithm compares competing classes (such as genuine vs. imposter) using Bayes Factors (BF). The importance of this approach is that we not only accept or reject one model (class), but compare it to others to make a decision. We show using a Receiver Operating Characteristic (ROC) curve that using BF for determining class will always perform at least as well as the traditional combining of factors, such as a voting algorithm. As the uncertainty decreases, the BF result continues to exceed the traditional methods result.

Bayes Factor based on the Trend Test Incorporating Hardy-Weinberg Disequilibrium: More Powerful to Detect Genetic Association

PubMed Central

Xu, Jinfeng; Yuan, Ao; Zheng, Gang

2012-01-01

Summary In the analysis of case-control genetic association, the trend test and Pearson’s test are the two most commonly used tests. In genome-wide association studies (GWAS), Bayes factor is a useful tool to support significant p-values, and a better measure than p-value when results are compared across studies with different sample sizes. When reporting the p-value of the trend test, we propose a Bayes factor directly based on the trend test. To improve the power to detect association under recessive or dominant genetic models, we propose a Bayes factor based on the trend test and incorporating Hardy-Weinberg disequilibrium in cases. When the true model is unknown, or both the trend test and Pearson’s test or other robust tests are applied in genome-wide scans, we propose a joint Bayes factor, combining the previous two Bayes factors. All three Bayes factors studied in this paper have closed forms and are easy to compute without integrations, so they can be reported along with p-values, especially in GWAS. We discuss how to use each of them and how to specify priors. Simulation studies and applications to three GWAS are provided to illustrate their usefulness to detect non-additive gene susceptibility in practice. PMID:22607017

Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution.

PubMed

Baele, Guy; Lemey, Philippe; Vansteelandt, Stijn

2013-03-06

Accurate model comparison requires extensive computation times, especially for parameter-rich models of sequence evolution. In the Bayesian framework, model selection is typically performed through the evaluation of a Bayes factor, the ratio of two marginal likelihoods (one for each model). Recently introduced techniques to estimate (log) marginal likelihoods, such as path sampling and stepping-stone sampling, offer increased accuracy over the traditional harmonic mean estimator at an increased computational cost. Most often, each model's marginal likelihood will be estimated individually, which leads the resulting Bayes factor to suffer from errors associated with each of these independent estimation processes. We here assess the original 'model-switch' path sampling approach for direct Bayes factor estimation in phylogenetics, as well as an extension that uses more samples, to construct a direct path between two competing models, thereby eliminating the need to calculate each model's marginal likelihood independently. Further, we provide a competing Bayes factor estimator using an adaptation of the recently introduced stepping-stone sampling algorithm and set out to determine appropriate settings for accurately calculating such Bayes factors, with context-dependent evolutionary models as an example. While we show that modest efforts are required to roughly identify the increase in model fit, only drastically increased computation times ensure the accuracy needed to detect more subtle details of the evolutionary process. We show that our adaptation of stepping-stone sampling for direct Bayes factor calculation outperforms the original path sampling approach as well as an extension that exploits more samples. Our proposed approach for Bayes factor estimation also has preferable statistical properties over the use of individual marginal likelihood estimates for both models under comparison. Assuming a sigmoid function to determine the path between two competing

Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution

PubMed Central

2013-01-01

Background Accurate model comparison requires extensive computation times, especially for parameter-rich models of sequence evolution. In the Bayesian framework, model selection is typically performed through the evaluation of a Bayes factor, the ratio of two marginal likelihoods (one for each model). Recently introduced techniques to estimate (log) marginal likelihoods, such as path sampling and stepping-stone sampling, offer increased accuracy over the traditional harmonic mean estimator at an increased computational cost. Most often, each model’s marginal likelihood will be estimated individually, which leads the resulting Bayes factor to suffer from errors associated with each of these independent estimation processes. Results We here assess the original ‘model-switch’ path sampling approach for direct Bayes factor estimation in phylogenetics, as well as an extension that uses more samples, to construct a direct path between two competing models, thereby eliminating the need to calculate each model’s marginal likelihood independently. Further, we provide a competing Bayes factor estimator using an adaptation of the recently introduced stepping-stone sampling algorithm and set out to determine appropriate settings for accurately calculating such Bayes factors, with context-dependent evolutionary models as an example. While we show that modest efforts are required to roughly identify the increase in model fit, only drastically increased computation times ensure the accuracy needed to detect more subtle details of the evolutionary process. Conclusions We show that our adaptation of stepping-stone sampling for direct Bayes factor calculation outperforms the original path sampling approach as well as an extension that exploits more samples. Our proposed approach for Bayes factor estimation also has preferable statistical properties over the use of individual marginal likelihood estimates for both models under comparison. Assuming a sigmoid function to

Factors Influencing Spatial and Annual Variability in Eelgrass (Zostera marina L.) Meadows in Willapa Bay, Washington, and Coos Bay, Oregon, Estuaries

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thom, Ronald M.; Borde, Amy B.; Rumrill, Steven

2003-08-01

Environmental factors that influence annual variability and spatial differences in eelgrass meadows (Zostera marina L.) were examined within Willapa Bay, WA, and Coos Bay, OR, over a period of 4 years (1998-2001). A suite of eelgrass metrics were recorded annually at field sites that spanned the estuarine gradient from the marine-dominated to mesohaline regions. Growth of eelgrass plants was also monitored on a monthly basis within Sequim Bay, WA. Both the spatial cover and density of Z. marina were positively correlated with estuarine salinity and inversely correlated with temperature of the tideflat sediment. Experimental evidence verified that optimal eelgrass growthmore » occurred at highest salinities and relatively low temperatures. Eelgrass density, biomass, and the incident of flowering plants all increased substantially in Willapa Bay, and less so in Coos Bay, over the duration of the study. Warmer winters and cooler summers associated with the transition from El Ni?o to La Ni?a ocean conditions during the study period were correlated with the increase in eelgrass abundance and flowering. Anthropogenic factors (e.g., disturbance and erosion by vessel wakes and recreational shellfishing activities) may have contributed to spatial variability. Our findings indicate that large-scale changes in climate and nearshore ocean conditions can exert a strong regional influence on eelgrass abundance, which can vary annually by as much as 700% in Willapa Bay. Lower levels of variability observed in Coos Bay may be due to the stronger and more direct influence of the nearshore Pacific Ocean. We conclude that climate variation may have profound effects on the abundance and distribution of eelgrass meadows throughout the Pacific Northwest, and we anticipate that ocean conditions will emerge as a primary driving force for living estuarine resources and ecological processes that are associated with Z. marina beds within the landscape of these estuarine tidal basins.« less

Why Bayesian Psychologists Should Change the Way They Use the Bayes Factor.

PubMed

Hoijtink, Herbert; van Kooten, Pascal; Hulsker, Koenraad

2016-01-01

The discussion following Bem's ( 2011 ) psi research highlights that applications of the Bayes factor in psychological research are not without problems. The first problem is the omission to translate subjective prior knowledge into subjective prior distributions. In the words of Savage ( 1961 ): "they make the Bayesian omelet without breaking the Bayesian egg." The second problem occurs if the Bayesian egg is not broken: the omission to choose default prior distributions such that the ensuing inferences are well calibrated. The third problem is the adherence to inadequate rules for the interpretation of the size of the Bayes factor. The current paper will elaborate these problems and show how to avoid them using the basic hypotheses and statistical model used in the first experiment described in Bem ( 2011 ). It will be argued that a thorough investigation of these problems in the context of more encompassing hypotheses and statistical models is called for if Bayesian psychologists want to add a well-founded Bayes factor to the tool kit of psychological researchers.

Calibrated Bayes Factors Should Not Be Used: A Reply to Hoijtink, van Kooten, and Hulsker.

PubMed

Morey, Richard D; Wagenmakers, Eric-Jan; Rouder, Jeffrey N

2016-01-01

Hoijtink, Kooten, and Hulsker ( 2016 ) present a method for choosing the prior distribution for an analysis with Bayes factor that is based on controlling error rates, which they advocate as an alternative to our more subjective methods (Morey & Rouder, 2014 ; Rouder, Speckman, Sun, Morey, & Iverson, 2009 ; Wagenmakers, Wetzels, Borsboom, & van der Maas, 2011 ). We show that the method they advocate amounts to a simple significance test, and that the resulting Bayes factors are not interpretable. Additionally, their method fails in common circumstances, and has the potential to yield arbitrarily high Type II error rates. After critiquing their method, we outline the position on subjectivity that underlies our advocacy of Bayes factors.

Species delimitation using Bayes factors: simulations and application to the Sceloporus scalaris species group (Squamata: Phrynosomatidae).

PubMed

Grummer, Jared A; Bryson, Robert W; Reeder, Tod W

2014-03-01

Current molecular methods of species delimitation are limited by the types of species delimitation models and scenarios that can be tested. Bayes factors allow for more flexibility in testing non-nested species delimitation models and hypotheses of individual assignment to alternative lineages. Here, we examined the efficacy of Bayes factors in delimiting species through simulations and empirical data from the Sceloporus scalaris species group. Marginal-likelihood scores of competing species delimitation models, from which Bayes factor values were compared, were estimated with four different methods: harmonic mean estimation (HME), smoothed harmonic mean estimation (sHME), path-sampling/thermodynamic integration (PS), and stepping-stone (SS) analysis. We also performed model selection using a posterior simulation-based analog of the Akaike information criterion through Markov chain Monte Carlo analysis (AICM). Bayes factor species delimitation results from the empirical data were then compared with results from the reversible-jump MCMC (rjMCMC) coalescent-based species delimitation method Bayesian Phylogenetics and Phylogeography (BP&P). Simulation results show that HME and sHME perform poorly compared with PS and SS marginal-likelihood estimators when identifying the true species delimitation model. Furthermore, Bayes factor delimitation (BFD) of species showed improved performance when species limits are tested by reassigning individuals between species, as opposed to either lumping or splitting lineages. In the empirical data, BFD through PS and SS analyses, as well as the rjMCMC method, each provide support for the recognition of all scalaris group taxa as independent evolutionary lineages. Bayes factor species delimitation and BP&P also support the recognition of three previously undescribed lineages. In both simulated and empirical data sets, harmonic and smoothed harmonic mean marginal-likelihood estimators provided much higher marginal-likelihood estimates

Using Bayes factors to evaluate evidence for no effect: examples from the SIPS project.

PubMed

Dienes, Zoltan; Coulton, Simon; Heather, Nick

2018-02-01

To illustrate how Bayes factors are important for determining the effectiveness of interventions. We consider a case where inappropriate conclusions were drawn publicly based on significance testing, namely the SIPS project (Screening and Intervention Programme for Sensible drinking), a pragmatic, cluster-randomized controlled trial in each of two health-care settings and in the criminal justice system. We show how Bayes factors can disambiguate the non-significant findings from the SIPS project and thus determine whether the findings represent evidence of absence or absence of evidence. We show how to model the sort of effects that could be expected, and how to check the robustness of the Bayes factors. The findings from the three SIPS trials taken individually are largely uninformative but, when data from these trials are combined, there is moderate evidence for a null hypothesis (H0) and thus for a lack of effect of brief intervention compared with simple clinical feedback and an alcohol information leaflet (B = 0.24, P = 0.43). Scientists who find non-significant results should suspend judgement-unless they calculate a Bayes factor to indicate either that there is evidence for a null hypothesis (H0) over a (well-justified) alternative hypothesis (H1), or that more data are needed. © 2017 Society for the Study of Addiction.

Nuclear factor κB inhibitor BAY 11-7082 suppresses oxidative stress induced by endothelin-1 (ET-1) in rat kidney.

PubMed

Kowalczyk, Agata; Kołodziejczyk, Michał; Gorąca, Anna

2015-12-31

The aim of the study was to evaluate the effect of BAY 11-7082, an NF-κB inhibitor, on basal and ET-1-induced production of reactive oxygen species (ROS), TNF-α and p65 protein in rat kidney. The experimental animals were divided into five groups (n=7) receiving: 1) saline (control); 2 and 3) ET-1 in a dose of 3 μg/kg body weight (b.w.) or 12.5 μg/kg b.w.; 4) BAY 11-7082 (10 mg/kg b.w.); 5) BAY 11-7082 (10 mg/kg b.w.) and ET-1 (12.5 μg/kg b.w.), respectively. In kidney homogenates the concentration of thiobarbituric acid reactive substances (TBARS), H2O2, TNF-α, p65 protein and GSH/GSSG ratio were determined. ET-1 resulted in a dose-dependent increase in TBARS and hydrogen peroxide (H2O2) levels, and a decrease in GSH/GSSG ratio when compared to the controls. BAY 11-7082 administered 1 h before ET-1 administration at a dose of 12.5 μg/kg resulted in a decrease (P<0.001) in TBARS and H2O2 levels and an increase (P<0.001) in GSH/GSSG ratio compared to the ET-1 groups. The level of TNF-α was increased (P<0.001) in the presence of ET-1, while BAY 11-7082 reduced the TNF-α level (P<0.001). The rats receiving BAY 11-7082 showed a decrease in NF-κB p65 protein level in the nuclear fraction and an increase in the cytoplasmic fraction. The results suggest that BAY 11-7082 plays a protective role against ET-1 induced oxidative stress in kidney tissue. These actions of BAY 11-7082 may result from reduced activity of NF-κB signaling pathways. Inhibition of the NF-κB pathway may be a promising strategy for preventing the progression of kidney damage.

Safety and efficacy of BAY 94-9027, a prolonged-half-life factor VIII.

PubMed

Reding, M T; Ng, H J; Poulsen, L H; Eyster, M E; Pabinger, I; Shin, H-J; Walsch, R; Lederman, M; Wang, M; Hardtke, M; Michaels, L A

2017-03-01

Essentials Recombinant factor VIII BAY 94-9027 conjugates in a site-specific manner with polyethylene glycol. BAY 94-9027 was given to patients with severe hemophilia A as prophylaxis and to treat bleeds. BAY 94-9027 prevented bleeds at dose intervals up to every 7 days and effectively treated bleeds. BAY 94-9027 treatment was mainly well tolerated and no patient developed factor VIII inhibitors. Click to hear Dr Tiede's perspective on half-life extended factor VIII for the treatment of hemophilia A SUMMARY: Background BAY 94-9027 is a B-domain-deleted prolonged-half-life recombinant factor VIII (FVIII) that conjugates in a site-specific manner with polyethylene glycol. Objective Assess efficacy and safety of BAY 94-9027 for prophylaxis and treatment of bleeds in patients with severe hemophilia A. Patients/methods In this multinational, phase 2/3, partially randomized, open-label trial, men aged 12-65 years with FVIII < 1% and ≥ 150 exposure days to FVIII received BAY 94-9027 for 36 weeks on demand or prophylactically at intervals determined following a 10-week run-in period on 25 IU kg -1 body weight two times per week. Patients with > 1 bleed during the run-in subsequently received 30-40 IU kg -1 two times per week; patients with ≤ 1 bleed were eligible for randomization to every-5-days (45-60 IU kg -1 ) or every-7-days (60 IU kg -1 ) prophylaxis (1 : 1) for 26 additional weeks until randomization arms were filled. Patients who were eligible but not randomized continued twice-weekly prophylaxis. The primary efficacy outcome was annualized bleeding rate (ABR). Results The intent-to-treat population included 132 patients (prophylaxis, n = 112; on demand, n = 20). Median ABR (quartile [Q1; Q3]) for patients treated two times per week who were not eligible for randomization (n = 13) improved after dose increase (17.4 [14.3; 26.0] to 4.1 [2.0; 10.6]). Median ABR for patients randomized to every-5-days treatment (n = 43) was 1.9 (0; 4.2), similar to patients

On the null distribution of Bayes factors in linear regression

USDA-ARS?s Scientific Manuscript database

We show that under the null, the 2 log (Bayes factor) is asymptotically distributed as a weighted sum of chi-squared random variables with a shifted mean. This claim holds for Bayesian multi-linear regression with a family of conjugate priors, namely, the normal-inverse-gamma prior, the g-prior, and...

Bayes Factors Have Frequency Properties-This Should Not Be Ignored: A Rejoinder to Morey, Wagenmakers, and Rouder.

PubMed

Hoijtink, Herbert; van Kooten, Pascal; Hulsker, Koenraad

2016-01-01

Hoijtink, van Kooten, and Hulsker ( 2016 ) outline a research agenda for Bayesian psychologists: evaluate and use the frequency properties of Bayes factors. Morey, Wagenmakers, and Rouder ( 2016 ) respond that Bayes factors calibrated using frequency properties should not be used. This paper contains the response of Hoijtink, van Kooten, and Hulsker to the criticism of Morey, Wagenmakers, and Rouder ( 2016 ).

Relative contributions of external forcing factors to circulation and hydrographic properties in a micro-tidal bay

NASA Astrophysics Data System (ADS)

Yoon, Seokjin; Kasai, Akihide

2017-11-01

The dominant external forcing factors influencing estuarine circulation differ among coastal environments. A three-dimensional regional circulation model was developed to estimate external influence indices and relative contributions of external forcing factors such as external oceanic forcing, surface heat flux, wind stress, and river discharge to circulation and hydrographic properties in Tango Bay, Japan. Model results show that in Tango Bay, where the Tsushima Warm Current passes offshore of the bay, under conditions of strong seasonal winds and river discharge, the water temperature and salinity are strongly influenced by surface heat flux and river discharge in the surface layer, respectively, while in the middle and bottom layers both are mainly controlled by open boundary conditions. The estuarine circulation is comparably influenced by all external forcing factors, the strong current, surface heat flux, wind stress, and river discharge. However, the influence degree of each forcing factor varies with temporal variations in external forcing factors as: the influence of open boundary conditions is higher in spring and early summer when the stronger current passes offshore of the bay, that of surface heat flux reflects the absolute value of surface heat flux, that of wind stress is higher in late fall and winter due to strong seasonal winds, and that of river discharge is higher in early spring due to snow-melting and summer and early fall due to flood events.

Pharmacokinetic properties of BAY 81-8973, a full-length recombinant factor VIII.

PubMed

Shah, A; Delesen, H; Garger, S; Lalezari, S

2015-11-01

BAY 81-8973 is a full-length recombinant factor VIII (FVIII) with the same primary amino acid sequence as sucrose-formulated recombinant FVIII (rFVIII-FS) but is produced with advanced manufacturing technologies. To analyse the pharmacokinetics (PK) of BAY 81-8973 after single and multiple dosing across different age and ethnic groups in the LEOPOLD clinical trial programme. The LEOPOLD trials enrolled patients with severe haemophilia A aged 12-65 years (LEOPOLD I and II) or ≤12 years (LEOPOLD Kids) with ≥150 (LEOPOLD I and II) or ≥50 (LEOPOLD Kids) exposure days to any FVIII product and no history of FVIII inhibitors. PK were assessed using chromogenic and one-stage assays (only chromogenic assay for LEOPOLD Kids) after a single 50-IU kg(-1) dose of BAY 81-8973 and, in a subset of patients in LEOPOLD I, after repeated dosing. Pharmacokinetic analyses were also performed based on age (18 to 65, 12 to <18, 6 to <12 and <6 years) and ethnicity (Asian and non-Asian). Pharmacokinetic assessments in the LEOPOLD I trial showed non-inferiority of BAY 81-8973 vs. rFVIII-FS. The PK of BAY 81-8973 were comparable after single and multiple dosing. Age-based analysis in the three trials showed that plasma concentrations were slightly lower for children, but similar for adolescents compared with adults. Pharmacokinetic results were similar in the different ethnic groups. Results of the LEOPOLD trials show that the BAY 81-8973 pharmacokinetic profile is non-inferior to rFVIII-FS. Similar BAY 81-8973 pharmacokinetic values were observed following single and repeated dosing and across ethnic groups. © 2015 John Wiley & Sons Ltd.

Factors affecting suspended-solids concentrations in South San Francisco Bay, California

USGS Publications Warehouse

Schoellhamer, D.H.

1996-01-01

Measurements of suspended-solids concentration (SSC) were made at two depths at three sites in South San Francisco Bay (South Bay) to determine the factors that affect SSC. Twenty-eight segments of reliable and continuous SSC time series data longer than 14 days were collected from late 1991 or 1992 through September 1993. Spectral analysis and singular spectrum analysis were used to relate these data segments to time series of several potential forcing factors, including diurnal and semidiurnal tides, the spring-neap tidal cycle, wind shear, freshwater runoff, and longitudinal density differences. SSC is greatest during summer when a landward wind shear is applied to South Bay by the afternoon sea breeze. About one half the variance of SSC is caused by the spring-neap cycle, and SSC lags the spring-neap cycle by about 2 days. Relatively short duration of slack water limits the duration of deposition of suspended solids and consolidation of newly deposited bed sediment during the tidal cycle, so suspended solids accumulate in the water column as a spring tide is approached and slowly deposit as a neap tide is approached. Perturbations in SSC caused by wind and local runoff from winter storms during the study period were usually much smaller than SSC variations caused by the spring-neap cycle. Variations of SSC at the study sites at tidal timescales are tidally forced, and nonlinear physical processes are significant. Advective transport dominates during spring tides when water with higher SSC due to wind wave resuspension is advected to the main channel from shallow water, but during neap tides, advective transport is less significant. The findings of this and other studies indicate that the tidally averaged transport of suspended solids responds to seasonal variations of wind shear in South Bay.

Bayes Factors Unmask Highly Variable Information Content, Bias, and Extreme Influence in Phylogenomic Analyses.

PubMed

Brown, Jeremy M; Thomson, Robert C

2017-07-01

As the application of genomic data in phylogenetics has become routine, a number of cases have arisen where alternative data sets strongly support conflicting conclusions. This sensitivity to analytical decisions has prevented firm resolution of some of the most recalcitrant nodes in the tree of life. To better understand the causes and nature of this sensitivity, we analyzed several phylogenomic data sets using an alternative measure of topological support (the Bayes factor) that both demonstrates and averts several limitations of more frequently employed support measures (such as Markov chain Monte Carlo estimates of posterior probabilities). Bayes factors reveal important, previously hidden, differences across six "phylogenomic" data sets collected to resolve the phylogenetic placement of turtles within Amniota. These data sets vary substantially in their support for well-established amniote relationships, particularly in the proportion of genes that contain extreme amounts of information as well as the proportion that strongly reject these uncontroversial relationships. All six data sets contain little information to resolve the phylogenetic placement of turtles relative to other amniotes. Bayes factors also reveal that a very small number of extremely influential genes (less than 1% of genes in a data set) can fundamentally change significant phylogenetic conclusions. In one example, these genes are shown to contain previously unrecognized paralogs. This study demonstrates both that the resolution of difficult phylogenomic problems remains sensitive to seemingly minor analysis details and that Bayes factors are a valuable tool for identifying and solving these challenges. © The Author(s) 2016. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Vertical Structure of Aerosols and Mineral Dust Over the Bay of Bengal From Multisatellite Observations

NASA Astrophysics Data System (ADS)

Lakshmi, N. B.; Nair, Vijayakumar S.; Suresh Babu, S.

2017-12-01

The vertical distribution of aerosol and dust extinction coefficient over the Bay of Bengal is examined using the satellite observations (Cloud Aerosol Lidar with Orthogonal Polarization (CALIOP) and Moderate Resolution Imaging Spectroradiometer (MODIS)) for the period from 2006 to 2017. Distinct seasonal pattern is observed in the vertical structure of both aerosol and dust over the Bay of Bengal with an enhancement of 24% in the aerosol extinction above 1 km from winter (December, January and February) to premonsoon (March, April, and May). Significant contribution of dust is observed over the northern Bay of Bengal during premonsoon season where 22% of the total aerosol extinction is contributed by dust aerosols transported from the nearby continental regions. During winter, dust transport is found to be less significant with fractional contribution of 10%-13% to the total aerosol optical depth over the Bay of Bengal. MODIS-derived dust fraction (fine mode based) shows an overestimation up to twofold compared to CALIOP dust fraction (depolarization based), whereas the Goddard Chemistry Aerosol Radiation and Transport-simulated dust fraction underestimates the satellite-derived dust fractions over the Bay of Bengal. Though the long-term variation in dust aerosol showed a decreasing trend over the Bay of Bengal, the confidence level is insufficient in establishing the robustness of the observed trend. However, significant dust-induced heating is observed above the boundary layer during premonsoon season. This dust-induced elevated heating can affect the convection over the Bay of Bengal which will have implication on the monsoon dynamics over the Indian region.

Gradient Analysis and Classification of Carolina Bay Vegetation: A Framework for Bay Wetlands Conservation and Restoration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Diane De Steven,Ph.D.; Maureen Tone,PhD.

1997-10-01

This report address four project objectives: (1) Gradient model of Carolina bay vegetation on the SRS--The authors use ordination analyses to identify environmental and landscape factors that are correlated with vegetation composition. Significant factors can provide a framework for site-based conservation of existing diversity, and they may also be useful site predictors for potential vegetation in bay restorations. (2) Regional analysis of Carolina bay vegetation diversity--They expand the ordination analyses to assess the degree to which SRS bays encompass the range of vegetation diversity found in the regional landscape of South Carolina's western Upper Coastal Plain. Such comparisons can indicatemore » floristic status relative to regional potentials and identify missing species or community elements that might be re-introduced or restored. (3) Classification of vegetation communities in Upper Coastal Plain bays--They use cluster analysis to identify plant community-types at the regional scale, and explore how this classification may be functional with respect to significant environmental and landscape factors. An environmentally-based classification at the whole-bay level can provide a system of templates for managing bays as individual units and for restoring bays to desired plant communities. (4) Qualitative model for bay vegetation dynamics--They analyze present-day vegetation in relation to historic land uses and disturbances. The distinctive history of SRS bays provides the possibility of assessing pathways of post-disturbance succession. They attempt to develop a coarse-scale model of vegetation shifts in response to changing site factors; such qualitative models can provide a basis for suggesting management interventions that may be needed to maintain desired vegetation in protected or restored bays.« less

Moving in Parallel Toward a Modern Modeling Epistemology: Bayes Factors and Frequentist Modeling Methods.

PubMed

Rodgers, Joseph Lee

2016-01-01

The Bayesian-frequentist debate typically portrays these statistical perspectives as opposing views. However, both Bayesian and frequentist statisticians have expanded their epistemological basis away from a singular focus on the null hypothesis, to a broader perspective involving the development and comparison of competing statistical/mathematical models. For frequentists, statistical developments such as structural equation modeling and multilevel modeling have facilitated this transition. For Bayesians, the Bayes factor has facilitated this transition. The Bayes factor is treated in articles within this issue of Multivariate Behavioral Research. The current presentation provides brief commentary on those articles and more extended discussion of the transition toward a modern modeling epistemology. In certain respects, Bayesians and frequentists share common goals.

Mercury distribution and bioaccumulation in a temperate estuary: Masan Bay, Korea

NASA Astrophysics Data System (ADS)

Noh, S.; Kim, E.; Kundu, S. R.; Lee, B.; Han, S.

2012-12-01

Masan Bay is a semi-closed and temperate estuary located on the southeastern coast of Korea. Since it is surrounded by highly populated cities (Masan, Changwon, and Jinhae) and large industrial complexes (petrochemical, electrical, plastic, and metal industries), Masan Bay is contaminated with PCBs and PBDEs, as well as heavy metals. In the current study, we investigated the distribution and sources of Hg and methylmercury (MeHg) in surface water, sediment, and biota from Masan Bay, as well as the impact of sediment organic matter and acid-volatile sulfide on the MeHg fraction over the total Hg, as a proxy of MeHg production potential. Concentrations of Hg in the surface seawater and sediment ranged from 1.2 to 5.1 pM and 0.02 to 0.73 nmol g-1, respectively. The Hg input estimation showed that river water discharge is the prime input source of Hg into the bay. This agrees with the sediment Hg distribution, showing a gradual decrease from the inner bay sites toward the mouth of the bay. Concentrations of MeHg in surface seawater and sediment ranged from 0.02 to 0.41 pM and 0.19 to 1.88 pmol g-1, respectively. The MeHg flux estimation showed that the submarine groundwater discharge is the prime input source of MeHg. Sediment %MeHg was significantly higher in the outer bay sites, with a negative correlation with sediment organic matter content. A similar negative relationship was found for AVS and %MeHg. The solid-phase retention of inorganic Hg as a result of Hg binding by sediment organic matter seems to be a key-process to control Hg methylation potential in Masan Bay sediments. The estimated food web magnification factors Hg and MeHg in benthic organisms were 0.119 and 0.168, respectively, which were similar to those of various coastal marine environments. The food web magnification factors for pelagic organisms were higher than benthic organisms, suggesting that pelagic organisms might be at greater risk of Hg and MeHg accumulation.

Chesapeake Bay study

NASA Technical Reports Server (NTRS)

Love, W. J.

1972-01-01

The objectives and scope of the Chesapeake Bay study are discussed. The physical, chemical, biological, political, and social phenomena of concern to the Chesapeake Bay area are included in the study. The construction of a model of the bay which will provide a means of accurately studying the interaction of the ecological factors is described. The application of the study by management organizations for development, enhancement, conservation, preservation, and restoration of the resources is examined.

Population-attributable fraction of tubal factor infertility associated with chlamydia.

PubMed

Gorwitz, Rachel J; Wiesenfeld, Harold C; Chen, Pai-Lien; Hammond, Karen R; Sereday, Karen A; Haggerty, Catherine L; Johnson, Robert E; Papp, John R; Kissin, Dmitry M; Henning, Tara C; Hook, Edward W; Steinkampf, Michael P; Markowitz, Lauri E; Geisler, William M

2017-09-01

Chlamydia trachomatis infection is highly prevalent among young women in the United States. Prevention of long-term sequelae of infection, including tubal factor infertility, is a primary goal of chlamydia screening and treatment activities. However, the population-attributable fraction of tubal factor infertility associated with chlamydia is unclear, and optimal measures for assessing tubal factor infertility and prior chlamydia in epidemiological studies have not been established. Black women have increased rates of chlamydia and tubal factor infertility compared with White women but have been underrepresented in prior studies of the association of chlamydia and tubal factor infertility. The objectives of the study were to estimate the population-attributable fraction of tubal factor infertility associated with Chlamydia trachomatis infection by race (Black, non-Black) and assess how different definitions of Chlamydia trachomatis seropositivity and tubal factor infertility affect population-attributable fraction estimates. We conducted a case-control study, enrolling infertile women attending infertility practices in Birmingham, AL, and Pittsburgh, PA, during October 2012 through June 2015. Tubal factor infertility case status was primarily defined by unilateral or bilateral fallopian tube occlusion (cases) or bilateral fallopian tube patency (controls) on hysterosalpingogram. Alternate tubal factor infertility definitions incorporated history suggestive of tubal damage or were based on laparoscopic evidence of tubal damage. We aimed to enroll all eligible women, with an expected ratio of 1 and 3 controls per case for Black and non-Black women, respectively. We assessed Chlamydia trachomatis seropositivity with a commercial assay and a more sensitive research assay; our primary measure of seropositivity was defined as positivity on either assay. We estimated Chlamydia trachomatis seropositivity and calculated Chlamydia trachomatis-tubal factor infertility odds

DESICCATION AND OTHER FACTORS AFFECTING THE UPPER INTERTIDAL DISTRIBUTION OF EELGRASS IN YAQUINA BAY, OR

EPA Science Inventory

Eelgrass (Zostera marina) in Pacific Northwest is primarily intertidal, yet little research has been done on what factors control its upper intertidal growth boundary. In July 2000 a two year study was initiated in Yaquina Bay (Newport, OR) to evaluate the effects of four factor...

Weak acid extractable metals in Bramble Bay, Queensland, Australia: temporal behaviour, enrichment and source apportionment.

PubMed

Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

2015-02-15

Sediment samples were taken from six sampling sites in Bramble Bay, Queensland, Australia between February and November in 2012. They were analysed for a range of heavy metals including Al, Fe, Mn, Ti, Ce, Th, U, V, Cr, Co, Ni, Cu, Zn, As, Cd, Sb, Te, Hg, Tl and Pb. Fraction analysis, Enrichment Factors and Principal Component Analysis-Absolute Principal Component Scores (PCA-APCS) were carried out in order to assess metal pollution, potential bioavailability and source apportionment. Cr and Ni exceeded the Australian Interim Sediment Quality Guidelines at some sampling sites, while Hg was found to be the most enriched metal. Fraction analysis identified increased weak acid soluble Hg and Cd during the sampling period. Source apportionment via PCA-APCS found four sources of metals pollution, namely, marine sediments, shipping, antifouling coatings and a mixed source. These sources need to be considered in any metal pollution control measure within Bramble Bay. Copyright © 2014 Elsevier Ltd. All rights reserved.

Data integration in physiology using Bayes' rule and minimum Bayes' factors: deubiquitylating enzymes in the renal collecting duct.

PubMed

Xue, Zhe; Chen, Jia-Xu; Zhao, Yue; Medvar, Barbara; Knepper, Mark A

2017-03-01

A major challenge in physiology is to exploit the many large-scale data sets available from "-omic" studies to seek answers to key physiological questions. In previous studies, Bayes' theorem has been used for this purpose. This approach requires a means to map continuously distributed experimental data to probabilities (likelihood values) to derive posterior probabilities from the combination of prior probabilities and new data. Here, we introduce the use of minimum Bayes' factors for this purpose and illustrate the approach by addressing a physiological question, "Which deubiquitylating enzymes (DUBs) encoded by mammalian genomes are most likely to regulate plasma membrane transport processes in renal cortical collecting duct principal cells?" To do this, we have created a comprehensive online database of 110 DUBs present in the mammalian genome (https://hpcwebapps.cit.nih.gov/ESBL/Database/DUBs/). We used Bayes' theorem to integrate available information from large-scale data sets derived from proteomic and transcriptomic studies of renal collecting duct cells to rank the 110 known DUBs with regard to likelihood of interacting with and regulating transport processes. The top-ranked DUBs were OTUB1, USP14, PSMD7, PSMD14, USP7, USP9X, OTUD4, USP10, and UCHL5. Among these USP7, USP9X, OTUD4, and USP10 are known to be involved in endosomal trafficking and have potential roles in endosomal recycling of plasma membrane proteins in the mammalian cortical collecting duct. Copyright © 2017 the American Physiological Society.

Factors affecting nutrient trends in major rivers of the Chesapeake Bay Watershed

USGS Publications Warehouse

Sprague, Lori A.; Langland, M.J.; Yochum, S.E.; Edwards, R.E.; Blomquist, J.D.; Phillips, S.W.; Shenk, G.W.; Preston, S.D.

2000-01-01

Trends in nutrient loads and flow-adjusted concentrations in the major rivers entering Chesapeake Bay were computed on the basis of water-quality data collected between 1985 and 1998 at 29 monitoring stations in the Susquehanna, Potomac, James, Rappahannock, York, Patuxent, and Choptank River Basins. Two computer models?the Chesapeake Bay Watershed Model (WSM) and the U.S. Geological Survey?s 'Spatially Referenced Regressions on Watershed attributes' (SPARROW) Model?were used to help explain the major factors affecting the trends. Results from WSM simulations provided information on temporal changes in contributions from major nutrient sources, and results from SPARROW model simulations provided spatial detail on the distribution of nutrient yields in these basins. Additional data on nutrient sources, basin characteristics, implementation of management practices, and ground-water inputs to surface water were analyzed to help explain the trends. The major factors affecting the trends were changes in nutrient sources and natural variations in streamflow. The dominant source of nitrogen and phosphorus from 1985 to 1998 in six of the seven tributary basins to Chesapeake Bay was determined to be agriculture. Because of the predominance of agricultural inputs, changes in agricultural nutrient sources such as manure and fertilizer, combined with decreases in agricultural acreage and implementation of best management practices (BMPs), had the greatest impact on the trends in flow-adjusted nutrient concentrations. Urban acreage and population, however, were noted to be increasing throughout the Chesapeake Bay Watershed, and as a result, delivered loads of nutrients from urban areas increased during the study period. Overall, agricultural nutrient management, in combination with load decreases from point sources due to facility upgrades and the phosphate detergent ban, led to downward trends in flow-adjusted nutrient concentrations atmany of the monitoring stations in the

Temporal trends and bioavailability assessment of heavy metals in the sediments of Deception Bay, Queensland, Australia.

PubMed

Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

2014-12-15

Thirteen sites in Deception Bay, Queensland, Australia were sampled three times over a period of 7 months and assessed for contamination by a range of heavy metals, primarily As, Cd, Cr, Cu, Pb and Hg. Fraction analysis, enrichment factors and Principal Components Analysis-Absolute Principal Component Scores (PCA-APCS) analysis were conducted in order to identify the potential bioavailability of these elements of concern and their sources. Hg and Te were identified as the elements of highest enrichment in Deception Bay while marine sediments, shipping and antifouling agents were identified as the sources of the Weak Acid Extractable Metals (WE-M), with antifouling agents showing long residence time for mercury contamination. This has significant implications for the future of monitoring and regulation of heavy metal contamination within Deception Bay. Copyright © 2014 Elsevier Ltd. All rights reserved.

Assessment of relationship between rainfall and Escherichia coli in clams (Chamelea gallina) using the Bayes Factor.

PubMed

Ciccarelli, Cesare; Semeraro, Angela Marisa; Leinoudi, Melina; Trani, Vittoria Di; Murru, Sandra; Capocasa, Piero; Ciccarelli, Elena; Sacchini, Luca

2017-08-16

Consumption of bivalve shellfish harvested from water contaminated with sewage pollution presents a risk of human infections and targeting control measures require a good understanding of environmental factors influencing the transport and the fate of faecal contaminants within the hydrological catchments. Although there has been extensive development of regression models, the point of this paper, focused on the relationship between rainfall events and concentrations of Escherichia coli monitored in clams, was the use of a Bayesian approach, by the Bayes Factor. The study was conducted on clams harvested from the south coast of Marche Region (Italy), a coastal area impacted by continuous treated effluents, intermittent rainfalldependent untreated sewage spillage - as a consequence of stormwater overflowing - and rivers with an ephemeral flow regime. The work compared the different interpretation criteria of Bayes Factor, confirmed that E. coli concentrations in clams from the studied area varied in correlation with rainfall events, and demonstrated the effectiveness of Bayes Factor in the assessment of shellfish quality in coastal marine waters. However, it suggested that further investigations would be warranted to determine which environmental factors provide the better basis for accurate and timely predictions. Furthermore the gathered data could be useful, to the local authorities of Marche Region, in the definition of flexible monitoring programmes, taking into account the atmospheric events that could affect the correct functioning of sewage managing systems and the flow of tributary rivers.

Chlorinated hydrocarbon pesticides and polychlorinated biphenyls in sediment cores from San Francisco Bay

USGS Publications Warehouse

Venkatesan, M.I.; De Leon, R. P.; VanGeen, A.; Luoma, S.N.

1999-01-01

Sediment cores of known chronology from Richardson and San Pablo Bays in San Francisco Bay, CA, were analyzed for a suite of chlorinated hydrocarbon pesticides and polychlorinated biphenyls to reconstruct a historic record of inputs. Total DDTs (DDT = 2,4'- and 4,4'-dichlorodiphenyltrichloroethane and the metabolites, 2,4'- and 4,4'-DDE, -DDD) range in concentration from 4-21 ng/g and constitute a major fraction (> 84%) of the total pesticides in the top 70 cm of Richardson Bay sediment. A subsurface maximum corresponds to a peak deposition date of 1969-1974. The first measurable DDT levels are found in sediment deposited in the late 1930's. The higher DDT inventory in the San Pablo relative to the Richardson Bay core probably reflects the greater proximity of San Pablo Bay to agricultural activities in the watershed of the Sacramento and San Joaquin rivers. Total polychlorinated biphenyls (PCBs) occur at comparable levels in the two Bays (< 1-34 ng/g). PCBs are first detected in sediment deposited during the 1930's in Richardson Bay, about a decade earlier than the onset of detectable levels of DDTs. PCB inventories in San Pablo Bay are about a factor of four higher in the last four decades than in Richardson Bay, suggesting a distribution of inputs not as strongly weighed towards the upper reaches of the estuary as DDTs. The shallower subsurface maximum in PCBs compared to DDT in the San Pablo Bay core is consistent with the imposition of drastic source control measures four these constituents in 1970 and 1977 respectively. The observed decline in DDT and PCB levels towards the surface of both cores is consistent with a dramatic drop in the input of these pollutants once the effect of sediment resuspension and mixing is taken into account.

Efficacy and safety of BAY 81-8973, a full-length recombinant factor VIII: results from the LEOPOLD I trial.

PubMed

Saxena, K; Lalezari, S; Oldenburg, J; Tseneklidou-Stoeter, D; Beckmann, H; Yoon, M; Maas Enriquez, M

2016-09-01

BAY 81-8973 (Kovaltry(®) ) is a full-length, unmodified recombinant human factor VIII (FVIII) with the same amino acid sequence as sucrose-formulated recombinant FVIII and is produced using additional advanced manufacturing technologies. To demonstrate efficacy and safety of BAY 81-8973 for treatment of bleeds and as prophylaxis based on two different potency assignments. In LEOPOLD I (ClinicalTrials.gov identifier, NCT01029340), males aged 12-65 years with severe haemophilia A and ≥150 exposure days received BAY 81-8973 20-50 IU kg(-1) two or three times per week for 12 months. Potency was based on chromogenic substrate assay per European Pharmacopoeia and label adjusted to mimic one-stage assay potency. Patients were randomized for potency sequence and crossed over potency groups after 6 months, followed by an optional 12-month extension. Primary efficacy endpoint was annualized bleeding rate (ABR). Patients also received BAY 81-8973 during major surgeries. Sixty-two patients received BAY 81-8973 prophylaxis and were included in the analysis. Median ABR was 1.0 (quartile 1, 0; quartile 3, 5.1) without clinically relevant differences between potency periods. Median ABR was similar for twice-weekly vs. three times-weekly dosing (1.0 vs. 2.0). Haemostasis was maintained during 12 major surgeries. Treatment-related adverse event (AE) incidence was ≤7% overall; no patient developed inhibitors. One patient with risk factors for cardiovascular disease developed a myocardial infarction. BAY 81-8973 was efficacious in preventing and treating bleeding episodes, irrespective of the potency assignment method, with few treatment-related AEs. Caution should be used when treating older patients with cardiovascular risk factors. © 2016 Bayer. Haemophilia Published by John Wiley & Sons Ltd.

Using the Bayes Factors to Evaluate Person Fit in the Item Response Theory

ERIC Educational Resources Information Center

Pan, Tianshu; Yin, Yue

2017-01-01

In this article, we propose using the Bayes factors (BF) to evaluate person fit in item response theory models under the framework of Bayesian evaluation of an informative diagnostic hypothesis. We first discuss the theoretical foundation for this application and how to analyze person fit using BF. To demonstrate the feasibility of this approach,…

BFDCA: A Comprehensive Tool of Using Bayes Factor for Differential Co-Expression Analysis.

PubMed

Wang, Duolin; Wang, Juexin; Jiang, Yuexu; Liang, Yanchun; Xu, Dong

2017-02-03

Comparing the gene-expression profiles between biological conditions is useful for understanding gene regulation underlying complex phenotypes. Along this line, analysis of differential co-expression (DC) has gained attention in the recent years, where genes under one condition have different co-expression patterns compared with another. We developed an R package Bayes Factor approach for Differential Co-expression Analysis (BFDCA) for DC analysis. BFDCA is unique in integrating various aspects of DC patterns (including Shift, Cross, and Re-wiring) into one uniform Bayes factor. We tested BFDCA using simulation data and experimental data. Simulation results indicate that BFDCA outperforms existing methods in accuracy and robustness of detecting DC pairs and DC modules. Results of using experimental data suggest that BFDCA can cluster disease-related genes into functional DC subunits and estimate the regulatory impact of disease-related genes well. BFDCA also achieves high accuracy in predicting case-control phenotypes by using significant DC gene pairs as markers. BFDCA is publicly available at http://dx.doi.org/10.17632/jdz4vtvnm3.1. Copyright © 2016 Elsevier Ltd. All rights reserved.

Developing Oxidized Nitrogen Atmospheric Deposition Source Attribution from CMAQ for Air-Water Trading for Chesapeake Bay

NASA Astrophysics Data System (ADS)

Dennis, R. L.; Napelenok, S. L.; Linker, L. C.; Dudek, M.

2012-12-01

the fractional contributions of Bay state NOx emissions to the oxidized nitrogen deposition to the Chesapeake Bay watershed and the Bay. We then present example tables of the fractional contributions of Bay state NOx emissions from mobile, off road, power plant and industrial emissions to key tributaries: the Potomac, Susquehanna and James Rivers. Finally, we go through an example for a mobile source NOx reductions in Pennsylvania to show how the tributary load offset would be calculated using the factors generated by CMAQ DDM-3D.

Monitoring of DSP toxins in small-sized plankton fraction of seawater collected in Mutsu Bay, Japan, by ELISA method: relation with toxin contamination of scallop.

PubMed

Imai, Ichiro; Sugioka, Hikaru; Nishitani, Goh; Mitsuya, Tadashi; Hamano, Yonekazu

2003-01-01

Monitorings were conducted on DSP toxins in mid-gut gland of scallop (mouse assay), cell numbers of toxic dinoflagellate species of Dinophysis, and diarrhetic shellfish poisoning (DSP) toxins in small-sized (0.7-5 microm) plankton fraction of seawater collected from surface (0 m) and 20 m depth at a station in Mutsu Bay, Aomori Prefecture, Japan, in 2000. A specific enzyme-linked immunosorbent assay (ELISA) was employed for the analysis of DSP toxins in small-sized plankton fraction using a mouse monoclonal anti-okadaic acid antibody which recognizes okadaic acid, dinophysistoxin-1, and dinophysistoxin-3. DSP toxins were detected twice in the mid-gut gland of scallops at 1.1-2.3 MU (mouse units) g(-1) on 26 June and at 0.6-1.2 MU g(-1) on 3 July, respectively. Relatively high cell densities of D. fortii were observed on 26 June and 11 September, and may only contribute to the bivalve toxicity during late June to early July. D. acuminata did not appear to be responsible for the toxicity of scallops in Mutsu Bay in 2000. ELISA monitoring of small-sized plankton fraction in seawater could detect DSP toxins two weeks before the detection of the toxin in scallops, and could do so two weeks after the loss of the bivalve toxicity by mouse assay. On 17 July, toxic D. fortii was detected at only small number, <10 cells l(-1), but DSP toxins were detected by the ELISA assay, suggesting a presence of other toxic small-sized plankton in seawater. For the purpose of reducing negative impacts of DSP occurrences, monitorings have been carried out hitherto on DSP toxins of bivalve tissues by mouse assay and on cell densities of "toxic" species of Dinophysis. Here we propose a usefulness of ELISA monitoring of plankton toxicity, especially in small-sized fraction, which are possible foods of mixotrophic Dinophysis, as a practical tool for detecting and predicting DSPs in coastal areas of fisheries grounds of bivalve aquaculture.

Stormwater impact in Guanabara Bay (Rio de Janeiro): Evidences of seasonal variability in the dynamic of the sediment heavy metals

NASA Astrophysics Data System (ADS)

Fonseca, E. M.; Baptista Neto, J. A.; Silva, C. G.; McAlister, J. J.; Smith, B. J.; Fernandez, M. A.

2013-09-01

Guanabara Bay is one of the most prominent coastal bays in Brazil. This environment is an estuary of 91 rivers and channels, surrounded by the metropolis of Rio de Janeiro. The bay receives considerable amounts of contaminants introduced from sewage effluents, industrial discharge, urban and agricultural runoff, atmospheric fallout, and the combined inputs from the rivers, making Guanabara Bay one of the most polluted coastal environments on the Brazilian coastline. The aim of this work is to study the concentration and fractionation of the heavy metals within the sediments of the bay. In order to understand the possible seasonal influence on the heavy metal fractionation, two campaigns were carried out in two different seasons of the year (rainy and dry). Twelve stations, in four different areas, with different oceanographic characteristics, where chosen. To assess the bioavailability of the metals a selective extraction procedure was used to study the geochemical fractionation and bioavailability of Zn, Cu, Cr, Ni and Pb. The rainy season was very important with respect to variation in the total concentrations of Cr, Ni and Pb and their fractionation within different "operational" phases present in Guanabara Bay sediments. The water-soluble phase showed little importance, with respect to metal adsorption and this would suggest very low mobility of metals in the water column. Nevertheless, the potentially available metals within these sediments showed a high probability for their release and therefore cause contamination of the water column, since different parts of the bay are constantly subjected to dredging projects promoted by the harbor authorities.

A Test by Any Other Name: P Values, Bayes Factors, and Statistical Inference.

PubMed

Stern, Hal S

2016-01-01

Procedures used for statistical inference are receiving increased scrutiny as the scientific community studies the factors associated with insuring reproducible research. This note addresses recent negative attention directed at p values, the relationship of confidence intervals and tests, and the role of Bayesian inference and Bayes factors, with an eye toward better understanding these different strategies for statistical inference. We argue that researchers and data analysts too often resort to binary decisions (e.g., whether to reject or accept the null hypothesis) in settings where this may not be required.

Informative priors on fetal fraction increase power of the noninvasive prenatal screen.

PubMed

Xu, Hanli; Wang, Shaowei; Ma, Lin-Lin; Huang, Shuai; Liang, Lin; Liu, Qian; Liu, Yang-Yang; Liu, Ke-Di; Tan, Ze-Min; Ban, Hao; Guan, Yongtao; Lu, Zuhong

2017-11-09

PurposeNoninvasive prenatal screening (NIPS) sequences a mixture of the maternal and fetal cell-free DNA. Fetal trisomy can be detected by examining chromosomal dosages estimated from sequencing reads. The traditional method uses the Z-test, which compares a subject against a set of euploid controls, where the information of fetal fraction is not fully utilized. Here we present a Bayesian method that leverages informative priors on the fetal fraction.MethodOur Bayesian method combines the Z-test likelihood and informative priors of the fetal fraction, which are learned from the sex chromosomes, to compute Bayes factors. Bayesian framework can account for nongenetic risk factors through the prior odds, and our method can report individual positive/negative predictive values.ResultsOur Bayesian method has more power than the Z-test method. We analyzed 3,405 NIPS samples and spotted at least 9 (of 51) possible Z-test false positives.ConclusionBayesian NIPS is more powerful than the Z-test method, is able to account for nongenetic risk factors through prior odds, and can report individual positive/negative predictive values.Genetics in Medicine advance online publication, 9 November 2017; doi:10.1038/gim.2017.186.

Some risk factors that affect contamination of mussels (Mytilus galloprovincialis) from the Bay of Kotor, Montenegro

NASA Astrophysics Data System (ADS)

Grković, N.; Velebit, B.; Teodorović, V.; Karabasil, N.; Vasilev, D.; Đorđević, V.; Dimitrijević, M.

2017-09-01

Pollution and contamination of the Bay of Kotor ecosystem arise from both anthropogenic sources and natural weathering. In recent decades, a need has arisen for regular control of marine organisms, which are used in human nutrition, because the entire bay is constantly and increasingly exposed to negative anthropogenic impact. Molluscs, including mussels (Mytilus galloprovincialis), can be involved in foodborne disease. They are filter feeding organisms, able to retain and concentrate in their bodies the bacteria, parasites, viruses and biotoxins of marine algae present in their external environment. A structured field study was undertaken in the Bay of Kotor, Montenegro, in order to investigate plausible influence of environmental factors, like rainfall and temperature, on the variability of Escherichia coli and norovirus (NoV). This study focuses on human-derived pathogens that are abundant in sewage-related sources. We proved the negative correlation between outside temperature and the number of E.coli and the presents of Norovirus in Bay of Kotor mussel. We used this data from the sampling site to discuss options to better manage the risk of contamination of shellfish. From the aspect of food safety, an upgrade of monitoring plans in the future could lead to obtaining safer products.

Rare earth elements in intertidal sediments of Bohai Bay, China: concentration, fractionation and the influence of sediment texture.

PubMed

Zhang, Yong; Gao, Xuelu; Arthur Chen, Chen-Tung

2014-07-01

Surface sediments from intertidal Bohai Bay were assessed using a four-step sequential extraction procedure to determine their concentrations of rare earth elements (REEs) and the chemical forms in which those elements were present. The normalized ratios La/Gd and La/Yb showed that LREE contents were not significantly higher than the middle REEs or HREE contents. A negative Ce anomaly and positive Eu were observed in sand and silty sand sediments, whereas no significant Ce or Eu anomaly was found in clayey silt sediments. Residual fraction of REEs accounted for the majority of their total concentrations. Middle REEs were more easily leached than other REEs, especially in clayey silt sediment. REEs contents in the surface sediment from the intertidal Bohai Sea were consistent with data from the upper continental crust and China shallow sea sediments, indicating that they were generally unaffected by heavily anthropogenic effects from adjacent areas. Copyright © 2014 Elsevier Inc. All rights reserved.

Fractionation and reconstitution of factors required for accurate transcription of mammalian ribosomal RNA genes: identification of a species-dependent initiation factor.

PubMed Central

Mishima, Y; Financsek, I; Kominami, R; Muramatsu, M

1982-01-01

Mouse and human cell extracts (S100) can support an accurate and efficient transcription initiation on homologous ribosomal RNA gene (rDNA) templates. The cell extracts were fractionated with the aid of a phosphocellulose column into four fractions (termed A, B, C and D), including one containing a major part of the RNA polymerase I activity. Various reconstitution experiments indicate that fraction D is an absolute requirement for the correct and efficient transcription initiation by RNA polymerase I on both mouse and human genes. Fraction B effectively suppresses random initiation on these templates. Fraction A appears to further enhance the transcription which takes place with fractions C and D. Although fractions A, B and C are interchangeable between mouse and human extracts, fraction D is not; i.e. initiation of transcription required the presence of a homologous fraction D for both templates. The factor(s) in fraction D, however, is not literally species-specific, since mouse D fraction is capable of supporting accurate transcription initiation on a rat rDNA template in the presence of all the other fractions from human cell extract under the conditions where human D fraction is unable to support it. We conclude from these experiments that a species-dependent factor in fraction D plays an important role in the initiation of rDNA transcription in each animal species. Images PMID:7177852

Zonation and structuring factors of meiofauna communities in a tropical seagrass bed (Gazi Bay, Kenya)

NASA Astrophysics Data System (ADS)

De Troch, Marleen; Gurdebeke, Shirley; Fiers, Frank; Vincx, Magda

2001-02-01

This study deals with the relation between tropical meiofauna and environmental variables by comparing the 'benthic' (i.e. in the bare sediment adjacent to seagrass plants) and the 'epiphytic' (i.e. in samples including seagrass plants) meiofauna associated with five seagrass species from the high intertidal to the high subtidal zone in Gazi Bay (Kenya). Ordination and variance analysis revealed three distinct 'benthic' and two 'epiphytic' meiofauna assemblages. These assemblages corresponded entirely with those identified for the seagrass species: a high intertidal pioneer association ( Halophila ovalis/ Halodule wrightii), an intertidal climax assemblage ( Thalassia hemprichii) and a high subtidal pioneer association ( Halophila stipulacea/ Syringodium isoetifolium). These data support the hypothesis that meiofaunal communities correspond to the characteristic zonation of the seagrass vegetation in Gazi Bay. In beds of the pioneer seagrass species, the close relationship between sediment characteristics and both 'benthic' and 'epiphytic' meiofauna communities suggests that these pioneer communities were mainly driven by physical factors. The 'benthic' communities adjacent to the climax seagrass species T. hemprichii were more structured by biogenic factors, e.g. % TOM, chlorophyll a and c, fucoxanthin, habitat complexity and growth form of the seagrass species. For its associated 'epiphytic' meiofauna the latter conclusion was even more striking. These data corroborate the importance of physical factors in disturbed environments (intertidal zone, near pioneer seagrasses) and of biotic factors in more stable conditions (subtidal zone, near climax seagrasses).

Picoplankton Bloom in Global South? A High Fraction of Aerobic Anoxygenic Phototrophic Bacteria in Metagenomes from a Coastal Bay (Arraial do Cabo--Brazil).

PubMed

Cuadrat, Rafael R C; Ferrera, Isabel; Grossart, Hans-Peter; Dávila, Alberto M R

2016-02-01

Marine habitats harbor a great diversity of microorganism from the three domains of life, only a small fraction of which can be cultivated. Metagenomic approaches are increasingly popular for addressing microbial diversity without culture, serving as sensitive and relatively unbiased methods for identifying and cataloging the diversity of nucleic acid sequences derived from organisms in environmental samples. Aerobic anoxygenic phototrophic bacteria (AAP) play important roles in carbon and energy cycling in aquatic systems. In oceans, those bacteria are widely distributed; however, their abundance and importance are still poorly understood. The aim of this study was to estimate abundance and diversity of AAPs in metagenomes from an upwelling affected coastal bay in Arraial do Cabo, Brazil, using in silico screening for the anoxygenic photosynthesis core genes. Metagenomes from the Global Ocean Sample Expedition (GOS) were screened for comparative purposes. AAPs were highly abundant in the free-living bacterial fraction from Arraial do Cabo: 23.88% of total bacterial cells, compared with 15% in the GOS dataset. Of the ten most AAP abundant samples from GOS, eight were collected close to the Equator where solar irradiation is high year-round. We were able to assign most retrieved sequences to phylo-groups, with a particularly high abundance of Roseobacter in Arraial do Cabo samples. The high abundance of AAP in this tropical bay may be related to the upwelling phenomenon and subsequent picoplankton bloom. These results suggest a link between upwelling and light abundance and demonstrate AAP even in oligotrophic tropical and subtropical environments. Longitudinal studies in the Arraial do Cabo region are warranted to understand the dynamics of AAP at different locations and seasons, and the ecological role of these unique bacteria for biogeochemical and energy cycling in the ocean.

Mink biomagnification factors for dioxin-like compounds fed Saginaw Bay carp

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kubiak, T.J.; Tillitt, D.E.; Heaton, S.N.

1994-12-31

Diets containing 0, 10, 20 and 40% Saginaw Bay carp were fed to ranch mink to assess reproductive effects. All carp diets adversely affected reproduction. The diets and livers of the adult mink at the end of the study were chemically analyzed for planar halogenated hydrocarbons (PHHS) that induce aryl hydrocarbon hydroxylase (AHH)/ethoxyresorufin o-deethylase (EROD). Biomagnification factors (BMFS) from diets to mink livers were calculated. AHH and EROD-active PCB congeners uniformly magnified across diets except for PCB 126, which had higher magnification at lowest carp and control diets. PCB and PCDF congener magnification ranged from incalculable to 60-fold higher andmore » individual PCDDs ranged from incalculable to 165 times the diet. As expected from previous mammalian studies, 2378-TCDD magnified over an order of magnitude more than 2378-TCDF but by 4 to 5-fold less than 23478-PCDF. Based on dioxin equivalents theory and TEFS, PCB 126 ranked first in the liver residues of 2378-TCDD equivalents followed by PCB 105, 23478-PCDF and 2378-TCDD. Magnification factors allow for interpretation of relative exposure risks from certain wild forage species if wild mink liver concentrations are known. Conversely, knowledge of wild mink forage item concentrations allows for calculation of an estimated wild mink liver residue, when the concentration and dietary forage percentage are multiplied by the BMF. Therefore, BMFs can assist in the elucidation of relative risk of a population to these contaminants without necessarily having large numbers of mink samples, especially in habitats such as the Saginaw Bay area where mink and otter populations are presumed to be affected by high PHH contamination.« less

Long-term morphologic evolution of the Hangzhou Bay, China

NASA Astrophysics Data System (ADS)

Wen, W.; Zhijun, D.; Hualiang, X.

2013-12-01

Estuaries are the most productive ecosystems of coastal zones in the world, which are significant to mankind as places of navigation, recreation and commerce as well as extensive and diverse habitats for wildlife. However, most estuary environments in the world had occurred greatly changes in recent decades. These estuaries have suffered from impacts of forcing factors including wave climate, mean sea level change and storm surge, especial to the intensive human activities such as training wall construction, channel dredging, sand mining and dam constructions. Thus, there have been increasing concerns about estuary environment changes under effects of different factors. Riverine loads into the Changjiang Estuary have declined dramatically with the construction of Three Gorges Dam (TGD) in 2003. The morphological evolution of the Hangzhou bay that located the southern proximity of the Yangtze estuary starts to attract increasing attentions due to most material of the Hangzhou bay received from Yangtze estuary. In this paper, historical bathymetric charts were digitized and analyzed within a GIS to provide quantitative estimate of changes in volumes in different regions below 0 m elevation. The results show that Hangzhou bay has experienced a major loss in estuarine volume of about 15% with annual mean sediment deposition rate of 80 million m3/a during the last 75 years. However, there is a large-scale spatial adjustment in Hangzhou bay: Bathymetric changes of the Hangzhou bay can be rapidly shifted within the range of 8-10 classes. Volume of the Jinshanzui upstream of the Hangzhou bay has obviously decreased in the last 75 years, especially during 2003-2008. However, Volume of the southern Hangzhou bay has experienced slowly decrease with minor deposition. The northern Hangzhou bay had largely volume changes with rapidly decrease during 1931-1981, and drastically increase since 2003. Further analysis of the bathymetric data relating to possible factors indicates

Chesapeake Bay Watershed - Protecting the Chesapeake Bay and its rivers through science, restoration, and partnership

USGS Publications Warehouse

,

2012-01-01

The Chesapeake Bay, the Nation's largest estuary, has been degraded due to the impact of human-population increase, which has doubled since 1950, resulting in degraded water quality, loss of habitat, and declines in populations of biological communities. Since the mid-1980s, the Chesapeake Bay Program (CBP), a multi-agency partnership which includes the Department of Interior (DOI), has worked to restore the Bay ecosystem. The U.S. Geological Survey (USGS) has the critical role of providing unbiased scientific information that is utilized to document and understand ecosystem change to help assess the effectiveness of restoration strategies in the Bay and its watershed. The USGS revised its Chesapeake Bay science plan for 2006-2011 to address the collective needs of the CBP, DOI, and USGS with a mission to provide integrated science for improved understanding and management of the Bay ecosystem. The USGS science themes for this mission are: Causes and consequences of land-use change; Impact of climate change and associated hazards; Factors affecting water quality and quantity; Ability of habitat to support fish and bird populations; and Synthesis and forecasting to improve ecosystem assessment, conservation, and restoration.

Mass spectrometric characterization of the hypoxia-inducible factor (HIF) stabilizer drug candidate BAY 85-3934 (molidustat) and its glucuronidated metabolite BAY-348, and their implementation into routine doping controls.

PubMed

Dib, Josef; Mongongu, Cynthia; Buisson, Corinne; Molina, Adeline; Schänzer, Wilhelm; Thuss, Uwe; Thevis, Mario

2017-01-01

The development of new therapeutics potentially exhibiting performance-enhancing properties implicates the risk of their misuse by athletes in amateur and elite sports. Such drugs necessitate preventive anti-doping research for consideration in sports drug testing programmes. Hypoxia-inducible factor (HIF) stabilizers represent an emerging class of therapeutics that allows for increasing erythropoiesis in patients. BAY 85-3934 is a novel HIF stabilizer, which is currently undergoing phase-2 clinical trials. Consequently, the comprehensive characterization of BAY 85-3934 and human urinary metabolites as well as the implementation of these analytes into routine doping controls is of great importance. The mass spectrometric behaviour of the HIF stabilizer drug candidate BAY 85-3934 and a glucuronidated metabolite (BAY-348) were characterized by electrospray ionization-(tandem) mass spectrometry (ESI-MS(/MS)) and multiple-stage mass spectrometry (MS n ). Subsequently, two different laboratories established different analytical approaches (one each) enabling urine sample analyses by employing either direct urine injection or solid-phase extraction. The methods were cross-validated for the metabolite BAY-348 that is expected to represent an appropriate target analyte for human urine analysis. Two test methods allowing for the detection of BAY-348 in human urine were applied and cross-validated concerning the validation parameters specificity, linearity, lower limit of detection (LLOD; 1-5 ng/mL), ion suppression/enhancement (up to 78%), intra- and inter-day precision (3-21%), recovery (29-48%), and carryover. By means of ten spiked test urine samples sent blinded to one of the participating laboratories, the fitness-for-purpose of both assays was provided as all specimens were correctly identified applying both testing methods. As no post-administration study samples were available, analyses of authentic urine specimens remain desirable. Copyright © 2016 John Wiley

The effects of different environmental factors on the biochemical composition of particulate organic matter in Gwangyang Bay, South Korea

NASA Astrophysics Data System (ADS)

Lee, Jang Han; Lee, Dabin; Kang, Jae Joong; Joo, Hui Tae; Lee, Jae Hyung; Lee, Ho Won; Ahn, So Hyun; Kang, Chang Keun; Lee, Sang Heon

2017-04-01

The biochemical composition of particulate organic matter (POM) produced through phytoplankton photosynthesis is important in determining food quality for planktonic consumers as well as the physiological conditions of phytoplankton. Major environmental factors controlling the biochemical composition were seasonally investigated in Gwangyang Bay, South Korea, which has only natural conditions (e.g., no artificial dams). Water samples for the biochemical compositions were obtained from three different light depths (100, 30, and 1 %) mainly at three sites in Gwangyang Bay from April 2012 to April 2013. Different biochemical classes (carbohydrates, CHO; proteins, PRT; and lipids, LIP) were extracted, and then the concentrations were determined by the optical density measured with a spectrophotometer. The highest and lowest PRT compositions among the three biochemical classes were found in April 2012 (58.0 %) and August 2012 (21.2 %), whereas the highest and lowest LIP compositions were found in August 2012 (49.0 %) and April 2012 (24.8 %), respectively. The CHO composition was recorded as high in January 2013 and remained above 25 % during the study period. The calorific contents of the food material (FM) ranged from 1.0 to 6.1 Kcal m-3 (annual average ± SD = 2.8 ± 1.1 Kcal m-3). Based on a Pearson's correlation coefficient analysis, a major governing factor in the biochemical composition of POM was dissolved inorganic nitrogen loading from the river input in Gwangyang Bay. In conclusion, a relatively larger amount of FM and the higher calorific contents of POM found in this study compared to other regions reflected good nutritive conditions for sustaining productive shellfish and fish populations in Gwangyang Bay. Continuous observations are needed to monitor the marine ecosystem response to potential environmental perturbations in Gwangyang Bay.

Tracking riverborne sediment and contaminants in Commencement Bay, Washington, using geochemical signatures

USGS Publications Warehouse

Takesue, Renee K.; Conn, Kathleen E.; Dinicola, Richard S.

2017-09-29

Large rivers carry terrestrial sediment, contaminants, and other materials to the coastal zone where they can affect marine biogeochemical cycles and ecosystems. This U.S. Geological Survey study combined river and marine sediment geochemistry and organic contaminant analyses to identify riverborne sediment and associated contaminants at shoreline sites in Commencement Bay, Puget Sound, Washington, that could be used by adult forage fish and other marine organisms. Geochemical signatures distinguished the fine fraction (<0.063 millimeter, mm) of Puyallup River sediment—which originates from Mount Rainier, a Cascade volcano—from glacial fine sediment in lowland bluffs that supply sediment to beaches. In combination with activities of beryllium-7 (7Be), a short-lived radionuclide, geochemical signatures showed that winter 2013–14 sediment runoff from the Puyallup River was transported to and deposited along the north shore of Commencement Bay, then mixed downward into the sediment column. The three Commencement Bay sites at which organic contaminants were measured in surface sediment did not have measurable 7Be activities in that layer, so their contaminant assemblages were attributed to sources from previous years. Concentrations of organic contaminants (the most common of which were polycyclic aromatic hydrocarbons, polychlorinated biphenyls, and fecal sterols) were higher in the <0.063-mm fraction compared to the <2-mm fraction, in winter compared to summer, in river suspended sediment compared to river bar and bank sediment, and in marine sediment compared to river sediment. The geochemical property barium/aluminum (Ba/Al) showed that the median percentage of Puyallup River derived fine surface sediment along the shoreline of Commencement Bay was 77 percent. This finding, in combination with higher concentrations of organic contaminants in marine rather than river sediment, indicates that riverborne sediment-bound contaminants are retained in shallow

An Adaptive Model of Student Performance Using Inverse Bayes

ERIC Educational Resources Information Center

Lang, Charles

2014-01-01

This article proposes a coherent framework for the use of Inverse Bayesian estimation to summarize and make predictions about student behaviour in adaptive educational settings. The Inverse Bayes Filter utilizes Bayes theorem to estimate the relative impact of contextual factors and internal student factors on student performance using time series…

Population Attributable and Preventable Fractions: Cancer Risk Factor Surveillance, and Cancer Policy Projection

PubMed Central

Shield, Kevin D.; Parkin, D. Maxwell; Whiteman, David C.; Rehm, Jürgen; Viallon, Vivian; Micallef, Claire Marant; Vineis, Paolo; Rushton, Lesley; Bray, Freddie; Soerjomataram, Isabelle

2016-01-01

The proportions of new cancer cases and deaths that are caused by exposure to risk factors and that could be prevented are key statistics for public health policy and planning. This paper summarizes the methodologies for estimating, challenges in the analysis of, and utility of, population attributable and preventable fractions for cancers caused by major risk factors such as tobacco smoking, dietary factors, high body fat, physical inactivity, alcohol consumption, infectious agents, occupational exposure, air pollution, sun exposure, and insufficient breastfeeding. For population attributable and preventable fractions, evidence of a causal relationship between a risk factor and cancer, outcome (such as incidence and mortality), exposure distribution, relative risk, theoretical-minimum-risk, and counterfactual scenarios need to be clearly defined and congruent. Despite limitations of the methodology and the data used for estimations, the population attributable and preventable fractions are a useful tool for public health policy and planning. PMID:27547696

75 FR 29891 - Special Local Regulation; Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-28

...-AA08 Special Local Regulation; Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay... Lighthouse Dock, Fire Island, NY due to the annual Maggie Fischer Memorial Great South Bay Cross Bay Swim..., Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, NY, in the Federal Register (74...

Microzooplankton biomass distribution in Terra Nova Bay, Ross Sea (Antarctica)

NASA Astrophysics Data System (ADS)

Fonda Umani, S.; Monti, M.; Nuccio, C.

1998-11-01

This work describes the spatial and vertical distribution of microzooplankton (20-200 μm) abundance and biomass of the upper layers (0-100 m), collected during the first oceanographic Italian expedition in Antarctica (1987/1988) in Terra Nova Bay (Ross Sea). Biomass was estimated by using biovolume calculations and literature conversion factors. Sampling was carried out at three depths, surface, 50 and 100 m. The dominant taxa were made up of tintinnid ciliates, ciliates other than tintinnids, larvae of micrometazoa and heterotrophic dinoflagellates. The abundance of the total microplankton fraction had its absolute maximum in the center of Terra Nova Bay at the surface with 31 042 ind. dm -3. The areal and vertical distribution of heterotrophic microplankton biomass differs from that of abundance. On the basis of hydrological conditions, phytoplankton composition and biomass and microzooplankton biomass and structure it is possible to identify three groups of stations: 1—northern coastal stations (intermediate chlorophyll maxima, microphytoplankton prevalence, low microzooplankton biomass); 2—central stations (high surface chlorophyll, nanoplankton prevalence, high abundance of microzooplankton); 3—northern stations (deeper pycnocline, nanoplankton prevalence, high microzooplankton biomass at intermediate depths).

A mixed carbonate/clastic example in a restricted bay in a temperate carbonate shelf (Cala Fornells, northern Minorca Spain)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fornos, J.J.; Forteza, V.; Jaume, C.

1990-05-01

Cala Fornells is a restricted bay located in the northern section of the island Minorca. Cala Fornells has a surface area of 4 km{sup 2} and a maximum depth of 25 m at the mouth, which connects with the northern Minorca platform. Due to ephemeral streams with very fine textural inflow, the sedimentary facies present in the floor of the bay are primarily controlled by the bioclastic carbonate ecosystem production and the terrigenous input. The distribution of the facies is related to three major factors: (1) bathymetry, which controls the ecosystem distribution (Cymodocea nodosa-Caulerpa prolifera, Posidonia oceanica, and maeerl communities,more » from shallowest to deepest); (2) hydrodynamic conditions due to northern winds (locally called Tramuntana), which control the grain size distribution; and (3) local ephemeral streams, which control the terrigenous input. In the coarser fractions of the sediment (gravel and sand), the main component in the deepest zones are skeletal fragments of red algae. The shallowest zones contain fragments of the green alga Halimeda tuna, which may represent up to 50% of the total bioclastic fraction. The terrigenous components are mostly shales and only locally do they find a sand fragment of limestone and quartz grains. The organic matter content is very high (over 6% in the finest fractions), whereas in the more hydrodynamic and deeper facies (25 m) where the bioclastic fractions are predominant, the organic carbon content is below 0.5%.« less

Restoration Lessons Learned from Bay Scallop Habitat Models

EPA Science Inventory

Habitat quality and quantity are important factors to consider when restoring bay scallop (Argopecten irradians) populations; however, data linking habitat attributes to bay scallop populations are lacking. This information is essential to guide restoration efforts to reverse sc...

Florida Bay: A history of recent ecological changes

USGS Publications Warehouse

Fourqurean, J.W.; Robblee, M.B.

1999-01-01

Florida Bay is a unique subtropical estuary at the southern tip of the Florida peninsula. Recent ecological changes (seagrass die-off, algal blooms, increased turbidity) to the Florida Bay ecosystem have focused the attention of the public, commercial interests, scientists, and resource managers on the factors influencing the structure and function of Florida Bay. Restoring Florida Bay to some historic condition is the goal of resource managers, but what is not clear is what an anthropogenically-unaltered Florida Bay would look like. While there is general consensus that human activities have contributed to the changes occurring in the Florida Bay ecosystem, a high degree of natural system variability has made elucidation of the links between human activity and Florida Bay dynamics difficult. Paleoecological analyses, examination of long-term datasets, and directed measurements of aspects of the ecology of Florida Bay all contribute to our understanding of the behavior of the bay, and allow quantification of the magnitude of the recent ecological changes with respect to historical variability of the system.

Soil and groundwater attenuation factors for nitrogen from septic systems in the Chesapeake Bay TMDL

NASA Astrophysics Data System (ADS)

Radcliffe, D. E.; Geza, M.; O'Drisoll, M.; Humphrey, C., Jr.

2015-12-01

An expert panel was tasked with estimating the percent of the nitrogen (N) load from septic systems that was lost in the flow path from a typical home to third-order streams as part of the Chesapeake Bay Total Maximum Daily Load (TMDL). These losses were referred to as attenuation factors. We developed values for the soil (unsaturated) zone and for the Piedmont and Coastal Plain groundwater zones. For the soil zone, we used the Soil Treatment Unit MODel (STUMOD) to estimate loses due to denitrification for all 12 soil textural classes and then averaged the results over three textural groups. Assuming hydraulic loading at the design rate and a conventional system, the attenuation factors were 16% for sand, loamy sand, sandy loam, and loam soils; 34% for silt loam, clay loam, sandy clay loam, silty clay loam, and silt soils; and 54% for sandy clay, silty clay, and clay soils. Attenuation factors increased in the more clayey soils due to wetter conditions and more losses due to denitrification. Attenuation factors were also developed for reduced hydraulic loading rates and for systems using advanced N pre-treatment. For the Piedmont groundwater zone, we used data from a recent study in Georgia of small suburban streams with high-density septic systems. Stream base-flow load was estimated using simultaneous measurements of total N concentration and discharge and compared to the estimated groundwater input load, resulting in an attenuation factor of 81%. For the Coastal Plain groundwater zone, literature values of groundwater N concentrations within septic system plumes in Virginia, North Carolina, and Florida were used to estimate an attenuation factor of approximately 60% at 100m downgradient from the drainfield. These attenuation factors will be used to estimate the contribution of N to the Chesapeake Bay in the Phase 6 TMDL models.

Using Bayes to get the most out of non-significant results

PubMed Central

Dienes, Zoltan

2014-01-01

No scientific conclusion follows automatically from a statistically non-significant result, yet people routinely use non-significant results to guide conclusions about the status of theories (or the effectiveness of practices). To know whether a non-significant result counts against a theory, or if it just indicates data insensitivity, researchers must use one of: power, intervals (such as confidence or credibility intervals), or else an indicator of the relative evidence for one theory over another, such as a Bayes factor. I argue Bayes factors allow theory to be linked to data in a way that overcomes the weaknesses of the other approaches. Specifically, Bayes factors use the data themselves to determine their sensitivity in distinguishing theories (unlike power), and they make use of those aspects of a theory’s predictions that are often easiest to specify (unlike power and intervals, which require specifying the minimal interesting value in order to address theory). Bayes factors provide a coherent approach to determining whether non-significant results support a null hypothesis over a theory, or whether the data are just insensitive. They allow accepting and rejecting the null hypothesis to be put on an equal footing. Concrete examples are provided to indicate the range of application of a simple online Bayes calculator, which reveal both the strengths and weaknesses of Bayes factors. PMID:25120503

Using Bayes to get the most out of non-significant results.

PubMed

Dienes, Zoltan

2014-01-01

No scientific conclusion follows automatically from a statistically non-significant result, yet people routinely use non-significant results to guide conclusions about the status of theories (or the effectiveness of practices). To know whether a non-significant result counts against a theory, or if it just indicates data insensitivity, researchers must use one of: power, intervals (such as confidence or credibility intervals), or else an indicator of the relative evidence for one theory over another, such as a Bayes factor. I argue Bayes factors allow theory to be linked to data in a way that overcomes the weaknesses of the other approaches. Specifically, Bayes factors use the data themselves to determine their sensitivity in distinguishing theories (unlike power), and they make use of those aspects of a theory's predictions that are often easiest to specify (unlike power and intervals, which require specifying the minimal interesting value in order to address theory). Bayes factors provide a coherent approach to determining whether non-significant results support a null hypothesis over a theory, or whether the data are just insensitive. They allow accepting and rejecting the null hypothesis to be put on an equal footing. Concrete examples are provided to indicate the range of application of a simple online Bayes calculator, which reveal both the strengths and weaknesses of Bayes factors.

33 CFR 100.124 - Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York.

Code of Federal Regulations, 2011 CFR

2011-07-01

... South Bay Cross Bay Swim, Great South Bay, New York. 100.124 Section 100.124 Navigation and Navigable... NAVIGABLE WATERS § 100.124 Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York. (a) Regulated area. All navigable waters of Great South Bay, NY within a 100 yard radius of each...

A Bayes linear Bayes method for estimation of correlated event rates.

PubMed

Quigley, John; Wilson, Kevin J; Walls, Lesley; Bedford, Tim

2013-12-01

Typically, full Bayesian estimation of correlated event rates can be computationally challenging since estimators are intractable. When estimation of event rates represents one activity within a larger modeling process, there is an incentive to develop more efficient inference than provided by a full Bayesian model. We develop a new subjective inference method for correlated event rates based on a Bayes linear Bayes model under the assumption that events are generated from a homogeneous Poisson process. To reduce the elicitation burden we introduce homogenization factors to the model and, as an alternative to a subjective prior, an empirical method using the method of moments is developed. Inference under the new method is compared against estimates obtained under a full Bayesian model, which takes a multivariate gamma prior, where the predictive and posterior distributions are derived in terms of well-known functions. The mathematical properties of both models are presented. A simulation study shows that the Bayes linear Bayes inference method and the full Bayesian model provide equally reliable estimates. An illustrative example, motivated by a problem of estimating correlated event rates across different users in a simple supply chain, shows how ignoring the correlation leads to biased estimation of event rates. © 2013 Society for Risk Analysis.

The phytoplankton component of seston in San Francisco Bay

USGS Publications Warehouse

Wienke, S.M.; Cloern, J.E.

1987-01-01

Phytoplankton biomass (as carbon) was estimated from chlorophyll a concentrations (Chla) and a mean value for the ratio of phytoplankton carbon to chlorophyll a in San Francisco Bay. The ratio was determined as the slope of a Model II regression of POC' against (Chla), where POC' is total particulate organic carbon minus sediment-associated non-phytoplankton carbon. Samples from 30 fixed sites in the channel and lateral shoals of San Francisco Bay were collected once or twice a month from April to November 1980, and at irregular intervals in South Bay during 1984 and 1985. For all data the calculated mean value of phytoplankton C:Chla was 51 (95% confidence interval = 47-54). No significant differences were found in the C:Chla ratio between shallow and deep sites (where light availability differs) or between northern and southern San Francisco Bay (where phytoplankton community composition differs). Using the mean C:Chla ratio of 51, we calculated that phytoplankton biomass constitutes about one third of seston carbon under most circumstances, but this fraction ranges from about 95% during phytoplankton blooms to less than 20% during spring periods of low phytoplankton biomass and high suspended sediment concentration. ?? 1987.

33 CFR 167.103 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. 167.103 Section 167.103 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. (a) A separation...

33 CFR 167.102 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. 167.102 Section 167.102 Navigation and....102 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. (a) A...

33 CFR 167.103 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. 167.103 Section 167.103 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. (a) A separation...

33 CFR 167.103 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. 167.103 Section 167.103 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. (a) A separation...

33 CFR 167.102 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. 167.102 Section 167.102 Navigation and....102 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. (a) A...

33 CFR 167.102 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. 167.102 Section 167.102 Navigation and....102 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. (a) A...

33 CFR 167.103 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. 167.103 Section 167.103 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach. (a) A separation...

33 CFR 167.102 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. 167.102 Section 167.102 Navigation and....102 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. (a) A...

33 CFR 100.124 - Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York. 100.124 Section 100.124 Navigation and Navigable... NAVIGABLE WATERS § 100.124 Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York...

Phase I, randomized, double-blind, placebo-controlled, single-dose escalation study of the recombinant factor VIIa variant BAY 86-6150 in hemophilia.

PubMed

Mahlangu, J N; Coetzee, M J; Laffan, M; Windyga, J; Yee, T T; Schroeder, J; Haaning, J; Siegel, J E; Lemm, G

2012-05-01

BAY 86-6150 is a new human recombinant factor VIIa variant developed for high procoagulant activity and longer action in people with hemophilia with inhibitors. To investigate the safety, tolerability, pharmacodynamics, pharmacokinetics and immunogenicity of BAY 86-6150 in non-bleeding hemophilia subjects. The study included non-bleeding men (18-65 years of age) with moderate or severe hemophilia A or B with or without inhibitors. Sixteen subjects were randomized 3 : 1 to four cohorts of escalating doses of BAY 86-6150 (6.5, 20, 50 or 90 μg kg(-1) [n = 3 per cohort]) or placebo (n = 1 per cohort); an independent data-monitoring committee reviewed previous cohort data before the next dose escalation. Blood sampling was performed predose and postdose; subjects were monitored for 50 days postdose. At the tested doses, BAY 86-6150 was not associated with clinically significant adverse events or dose-limiting toxicities. BAY 86-6150 pharmacokinetics exhibited a linear dose response, with a half-life of 5-7 h. Subjects demonstrated consistent, dose-dependent thrombin generation ex vivo in platelet-poor plasma (PPP) (mean peak effect, 26-237 nm thrombin from 6.5 to 90 μg kg(-1)). Peak thrombin levels over time paralleled BAY 86-6150, with thrombin kinetics appearing to be slightly shorter; thus, circulating BAY 86-6150 retained activity. There were corresponding decreases in activated partial thromboplastin and prothrombin times. No subject developed de novo anti-BAY 86-6150 neutralizing antibodies during the 50-day follow-up. In this first-in-human, multicenter, randomized, double-blind, placebo-controlled, single-dose escalation study, BAY 86-6150 was tolerated at the highest dose (90 μg kg(-1)), with no safety concerns. Safety and efficacy will be further evaluated in phase II/III studies. © 2012 International Society on Thrombosis and Haemostasis.

Observations and a linear model of water level in an interconnected inlet-bay system

NASA Astrophysics Data System (ADS)

Aretxabaleta, Alfredo L.; Ganju, Neil K.; Butman, Bradford; Signell, Richard P.

2017-04-01

A system of barrier islands and back-barrier bays occurs along southern Long Island, New York, and in many coastal areas worldwide. Characterizing the bay physical response to water level fluctuations is needed to understand flooding during extreme events and evaluate their relation to geomorphological changes. Offshore sea level is one of the main drivers of water level fluctuations in semienclosed back-barrier bays. We analyzed observed water levels (October 2007 to November 2015) and developed analytical models to better understand bay water level along southern Long Island. An increase (˜0.02 m change in 0.17 m amplitude) in the dominant M2 tidal amplitude (containing the largest fraction of the variability) was observed in Great South Bay during mid-2014. The observed changes in both tidal amplitude and bay water level transfer from offshore were related to the dredging of nearby inlets and possibly the changing size of a breach across Fire Island caused by Hurricane Sandy (after December 2012). The bay response was independent of the magnitude of the fluctuations (e.g., storms) at a specific frequency. An analytical model that incorporates bay and inlet dimensions reproduced the observed transfer function in Great South Bay and surrounding areas. The model predicts the transfer function in Moriches and Shinnecock bays where long-term observations were not available. The model is a simplified tool to investigate changes in bay water level and enables the evaluation of future conditions and alternative geomorphological settings.

Observations and a linear model of water level in an interconnected inlet-bay system

USGS Publications Warehouse

Aretxabaleta, Alfredo; Ganju, Neil K.; Butman, Bradford; Signell, Richard

2017-01-01

A system of barrier islands and back-barrier bays occurs along southern Long Island, New York, and in many coastal areas worldwide. Characterizing the bay physical response to water level fluctuations is needed to understand flooding during extreme events and evaluate their relation to geomorphological changes. Offshore sea level is one of the main drivers of water level fluctuations in semienclosed back-barrier bays. We analyzed observed water levels (October 2007 to November 2015) and developed analytical models to better understand bay water level along southern Long Island. An increase (∼0.02 m change in 0.17 m amplitude) in the dominant M2 tidal amplitude (containing the largest fraction of the variability) was observed in Great South Bay during mid-2014. The observed changes in both tidal amplitude and bay water level transfer from offshore were related to the dredging of nearby inlets and possibly the changing size of a breach across Fire Island caused by Hurricane Sandy (after December 2012). The bay response was independent of the magnitude of the fluctuations (e.g., storms) at a specific frequency. An analytical model that incorporates bay and inlet dimensions reproduced the observed transfer function in Great South Bay and surrounding areas. The model predicts the transfer function in Moriches and Shinnecock bays where long-term observations were not available. The model is a simplified tool to investigate changes in bay water level and enables the evaluation of future conditions and alternative geomorphological settings.

33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Sturgeon Bay, Sturgeon Bay, Wis. 110.78 Section 110.78 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1...

33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sturgeon Bay, Sturgeon Bay, Wis. 110.78 Section 110.78 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1...

33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Sturgeon Bay, Sturgeon Bay, Wis. 110.78 Section 110.78 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1...

33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Sturgeon Bay, Sturgeon Bay, Wis. 110.78 Section 110.78 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1...

BAY 81-8973, a full-length recombinant factor VIII: Human heat shock protein 70 improves the manufacturing process without affecting clinical safety.

PubMed

Maas Enriquez, Monika; Thrift, John; Garger, Stephen; Katterle, Yvonne

2016-11-01

BAY 81-8973 is a full-length, unmodified recombinant human factor VIII (FVIII) approved for the treatment of hemophilia A. BAY 81-8973 has the same amino acid sequence as the currently marketed sucrose-formulated recombinant FVIII (rFVIII-FS) product and is produced using additional advanced manufacturing technologies. One of the key manufacturing advances for BAY 81-8973 is introduction of the gene for human heat shock protein 70 (HSP70) into the rFVIII-FS cell line. HSP70 facilitates proper folding of proteins, enhances cell survival by inhibiting apoptosis, and potentially impacts rFVIII glycosylation. HSP70 expression in the BAY 81-8973 cell line along with other manufacturing advances resulted in a higher-producing cell line and improvements in the pharmacokinetics of the final product as determined in clinical studies. HSP70 protein is not detected in the harvest or in the final BAY 81-8973 product. However, because this is a new process, clinical trial safety assessments included monitoring for anti-HSP70 antibodies. Most patients, across all age groups, had low levels of anti-HSP70 antibodies before exposure to the investigational product. During BAY 81-8973 treatment, 5% of patients had sporadic increases in anti-HSP70 antibody levels above a predefined threshold (cutoff value, 239 ng/mL). No clinical symptoms related to anti-HSP70 antibody development occurred. In conclusion, addition of HSP70 to the BAY 81-8973 cell line is an innovative technology for manufacturing rFVIII aimed at improving protein folding and expression. Improved pharmacokinetics and no effect on safety of BAY 81-8973 were observed in clinical trials in patients with hemophilia A. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

A Bayes Factor Meta-Analysis of Recent Extrasensory Perception Experiments: Comment on Storm, Tressoldi, and Di Risio (2010)

ERIC Educational Resources Information Center

Rouder, Jeffrey N.; Morey, Richard D.; Province, Jordan M.

2013-01-01

Psi phenomena, such as mental telepathy, precognition, and clairvoyance, have garnered much recent attention. We reassess the evidence for psi effects from Storm, Tressoldi, and Di Risio's (2010) meta-analysis. Our analysis differs from Storm et al.'s in that we rely on Bayes factors, a Bayesian approach for stating the evidence from data for…

Preventive fraction of physical fitness on risk factors in cardiac patients: Retrospective epidemiological study.

PubMed

Caru, Maxime; Kern, Laurence; Bousquet, Marc; Curnier, Daniel

2018-04-26

To quantify the preventive fraction of physical fitness on the risk factors in patients with cardiovascular diseases (CVDs). A total of 249 subjects (205 men and 44 women) suffering from CVD were categorized into four groups, according to their percentage of physical fitness. We calculated the odds ratio to obtain the preventive fraction in order to evaluate the impact of the physical fitness level on the risk factors ( i.e ., abdominal obesity, depression, diabetes, dyslipidemia, hypertension, obesity, overweight and smoking). It is observed that a normal physical fitness level is sufficient to induce a preventive action on abdominal obesity (38%), diabetes (12%), hypertension (33%), obesity (12%) and overweight (11%). Also, the preventive fraction increases with the level of physical fitness, in particular for hypertension (36%) and overweight (16%). A high physical fitness level does not necessarily induce a preventive action in most risk factors, excluding depression. This is the first study which demonstrates that reaching a normal physical fitness level is enough to induce a protection for some risk factors, despite having a CVD.

Preventive fraction of physical fitness on risk factors in cardiac patients: Retrospective epidemiological study

PubMed Central

Caru, Maxime; Kern, Laurence; Bousquet, Marc; Curnier, Daniel

2018-01-01

AIM To quantify the preventive fraction of physical fitness on the risk factors in patients with cardiovascular diseases (CVDs). METHODS A total of 249 subjects (205 men and 44 women) suffering from CVD were categorized into four groups, according to their percentage of physical fitness. We calculated the odds ratio to obtain the preventive fraction in order to evaluate the impact of the physical fitness level on the risk factors (i.e., abdominal obesity, depression, diabetes, dyslipidemia, hypertension, obesity, overweight and smoking). RESULTS It is observed that a normal physical fitness level is sufficient to induce a preventive action on abdominal obesity (38%), diabetes (12%), hypertension (33%), obesity (12%) and overweight (11%). Also, the preventive fraction increases with the level of physical fitness, in particular for hypertension (36%) and overweight (16%). A high physical fitness level does not necessarily induce a preventive action in most risk factors, excluding depression. CONCLUSION This is the first study which demonstrates that reaching a normal physical fitness level is enough to induce a protection for some risk factors, despite having a CVD. PMID:29707165

ORGANIC COMPOUNDS IN SURFACE SEDIMENTS AND OYSTER TISSUES FROM THE CHESAPEAKE BAY. APPENDICES

EPA Science Inventory

Detailed in the first part of this report is a development and discussion of the methodology used to extract and analyze sediment and oyster tissue samples from Chesapeake Bay for organic compounds. The method includes extraction, fractionation, and subsequent analysis using glas...

Details: Elevation of Plate Typical Bay, SectionThrough Plate Typical Bay, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

Details: Elevation of Plate Typical Bay, Section-Through Plate Typical Bay, Section-Through Plate Center Bay, Elevation of Plate Center Bay - Contoocook Covered Bridge, Spanning Contoocook River, Hopkinton, Merrimack County, NH

Seasonal and spatial characteristics of seawater and sediment at Youngil Bay, southeast coast of Korea.

PubMed

Lee, Mikyung; Bae, Wookeun; Chung, Jinwook; Jung, Hoi-Soo; Shim, Hojae

2008-01-01

analysis showed that the major controlling factors for the distribution pattern of each metal are grain size and organic carbon (C(org)) content. Based on the factor analysis, Al, Fe, Cr, Li, and Pb were shown strongly correlated with the mean grain size (Mz), whereas Cd, Cu, Zn, and Sn with the C(org) content. Results from the fractionation of the sedimentary metals into lattice and labile fractions to characterize the mobility of sediment metals showed that the mineral lattice fraction was high in the order of Al=K>Cr>Li>Sr>Fe, while the labile fraction, which might be released to the overlying water, was in the order of Pb>Zn>Cd>Cu>Ca>Sn. Evaluation of the sediment pollution status by applying (I(geo)(')) of 13 metals showed Cd, Cu, and Zn as high as 1-3 range at the old port. Even though the overall marine pollution mainly by the world-class steel industrial complex in this semi-enclosed bay area studied does not currently pose a serious threat, due to the seawater circulation and the large influx of river discharge, the countermeasures to implement the sediments concentrated with heavy metals, especially at the old port with no seawater circulation, are still warranted for this coastal water environment.

Review of factors affecting the distribution and abundance of waterfowl in shallow-water habitats of Chesapeake Bay

USGS Publications Warehouse

Perry, M.C.; Deller, A.S.

1996-01-01

Long-term trends of waterfowl populations in Chesapeake Bay demonstrate the importance of shallow-water habitats for waterfowl species. Although recent increases in field feeding by geese and swans lessened the importance of shallow-water areas for these species, most duck species depend almost exclusively on shallow-water habitats. Many factors influenced the distribution and abundance of waterfowl in shallow-water habitats. Habitat degradation resulted in the decline in numbers of most duck species and a change in distribution of some species. Increased numbers of mallards (Anas platyrhynchos) in recent decades probably resulted from release programs conducted by the Maryland Department of Natural Resources and private individuals. Studies of food habits since 1885 showed a decline in submerged-aquatic vegetation in the diet of some species, such as the canvasback (Aythya valisineria ), and an increase in the proportions of invertebrates in the diet. Diversity of food organisms for many waterfowl species has declined. Surveys of vegetation and invertebrates in the Chesapeake Bay generally reflect a degradation of shallow-water habitat. Human population increases in the Chesapeake Bay watershed directly and indirectly affected waterfowl distribution and abundance. The increase of exotic plant and invertebrate species in the bay, in most cases, benefited waterfowl populations. Increased contaminants have reduced the quality and quantity of habitat, although serious attempts to reverse this trend are underway. The use of shallow-water habitats by humans for fishing, hunting, boating, and other recreational and commercial uses reduced the use of shallow-water habitats by waterfowl. Humans can lessen the adverse influences on the valuable shallow-water habitats by restricting human population growth near these habitats and improving the water quality of the bay tributaries. Other affirmative actions that will improve these areas for waterfowl include greater

33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false San Pedro Bay-Anaheim Bay, CA. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay, CA. (a) A line drawn across the seaward extremities of the Anaheim Bay Entrance Jetties; thence to Long...

33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false San Pedro Bay-Anaheim Bay, CA. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay, CA. (a) A line drawn across the seaward extremities of the Anaheim Bay Entrance Jetties; thence to Long...

33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false San Pedro Bay-Anaheim Bay, CA. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay, CA. (a) A line drawn across the seaward extremities of the Anaheim Bay Entrance Jetties; thence to Long...

33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false San Pedro Bay-Anaheim Bay, CA. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay, CA. (a) A line drawn across the seaward extremities of the Anaheim Bay Entrance Jetties; thence to Long...

33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false San Pedro Bay-Anaheim Bay, CA. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay, CA. (a) A line drawn across the seaward extremities of the Anaheim Bay Entrance Jetties; thence to Long...

33 CFR 100.911 - Bay City Airshow, Bay City, MI.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI. (a...

33 CFR 100.911 - Bay City Airshow, Bay City, MI.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI. (a...

33 CFR 100.911 - Bay City Airshow, Bay City, MI.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI. (a...

33 CFR 100.911 - Bay City Airshow, Bay City, MI.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI. (a...

33 CFR 100.911 - Bay City Airshow, Bay City, MI.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI. (a...

Short Term Sediment Exchange Between Marshes and Bays Using Beryllium-7 as a Tracer, Fourleague Bay, Louisiana.

NASA Astrophysics Data System (ADS)

Restreppo, G. A.; Bentley, S. J.; Xu, K.; Wang, J.

2016-12-01

Modern delta models focus on the availability and exchange of coarse sediment as one of the major factors of deltaic growth or decay. Fine-grained sediment exchange within a river's delta is relatively poorly understood, as is the impact that this exchange has on land building and land loss. To better understand the dynamics of fine grain sediment exchange between river mouth, adjacent bays, and marshland, sediment cores from Fourleague Bay, LA, were collected and analyzed for 7Be, a naturally occurring radioisotope that serves as a marker for recently deposited sediment. Time-series push cores were collected every two months at ten sites, five located across a longitudinal transect in the middle bay and five located along adjacent marshes, from May 2015 to May 2016. All sites fall within 11 to 28 km of the Atchafalaya Delta, along a gradient extending towards the open ocean. Cores were extruded in 2 cm intervals, dried, ground, and analyzed via gamma spectrometry for the presence of 7Be. Inventories of 7Be were then calculated and used to determine bimonthly sedimentation rates over the course twelve months. Sediment deposition on the bay floor and marsh surface were then compared to Atchafalaya River discharge, wind speed and direction, and wave action. Preliminary results indicate patterns of initial fluvial sediment transfer from river to bay floor, then bay floor to marsh surface, with decreasing fluvial influence towards the open ocean. Sediment transport from bay to marsh appears to be coupled with meteorological forcing that induces bay-floor sediment resuspension and the flooding of marsh surfaces. This indirect mechanism of fluvial sediment supply to wetland surfaces may extend the region of influence for sediment delivery from man-made river-sediment diversions.

Hypoxia-Inducible Factor Pathway Inhibition Resolves Tumor Hypoxia and Improves Local Tumor Control After Single-Dose Irradiation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Helbig, Linda; Department of Radiation Oncology, University Hospital Carl Gustav Carus, Technische Universität Dresden, Dresden; Koi, Lydia

2014-01-01

Purpose: To study the effects of BAY-84-7296, a novel orally bioavailable inhibitor of mitochondrial complex I and hypoxia-inducible factor 1 (HIF-1) activity, on hypoxia, microenvironment, and radiation response of tumors. Methods and Materials: UT-SCC-5 and UT-SCC-14 human squamous cell carcinomas were transplanted subcutaneously in nude mice. When tumors reached 4 mm in diameter BAY-84-7296 (Bayer Pharma AG) or carrier was daily administered to the animals. At 7 mm tumors were either excised for Western blot and immunohistologic investigations or were irradiated with single doses. After irradiation animals were randomized to receive BAY-84-7296 maintenance or carrier. Local tumor control was evaluatedmore » 150 days after irradiation, and the dose to control 50% of tumors (TCD{sub 50}) was calculated. Results: BAY-84-7296 decreased nuclear HIF-1α expression. Daily administration of inhibitor for approximately 2 weeks resulted in a marked decrease of pimonidazole hypoxic fraction in UT-SCC-5 (0.5% vs 21%, P<.0001) and in UT-SCC-14 (0.3% vs 19%, P<.0001). This decrease was accompanied by a significant increase in fraction of perfused vessels in UT-SCC-14 but not in UT-SCC-5. Bromodeoxyuridine and Ki67 labeling indices were significantly reduced only in UT-SCC-5. No significant changes were observed in vascular area or necrosis. BAY-84-7296 before single-dose irradiation significantly decreased TCD{sub 50}, with an enhancement ratio of 1.37 (95% confidence interval [CI] 1.13-1.72) in UT-SCC-5 and of 1.55 (95% CI 1.26-1.94) in UT-SCC-14. BAY-84-7296 maintenance after irradiation did not further decrease TCD{sub 50}. Conclusions: BAY-84-7296 resulted in a marked decrease in tumor hypoxia and substantially reduced radioresistance of tumor cells with the capacity to cause a local recurrence after irradiation. The data suggest that reduction of cellular hypoxia tolerance by BAY-84-7296 may represent the primary biological mechanism underlying the observed enhancement

Using bioavailable soil fraction to assess the bioconcentration factor of plants in phytoremediation of mine soils

NASA Astrophysics Data System (ADS)

Roca, Núria; Rodríguez-Bocanegra, Javier; Bech, Jaume

2017-04-01

Polluted soils by heavy metals are characterized to present great concentrations of these pollutants. Ure wrote the following in 1996: "For understanding the chemistry of the heavy metals in their interaction with other soil components such as the clay minerals, organic matter and the soil solution, or to assess their mobility and retention as well as their availability to plants, the usual approach is to use selective chemical extraction". However, nowadays to assess the bioconcentration factor of plants in phytoremediation, the pseudototal or total concentration has been used. Strong mineral acids attack part of the silicate soil matrix and as consequence part of the heavy metals obtained are included in the structures of the mineral fraction. A different approach may, therefore, be more productive in the study of phytoremediation and the use of extractants, as EDTA or DTPA, can perhaps best be exploited by considering them in their role of bioconcentration factor. Moreover, EDTA and DTPA, which form strong complexes with many metals, can extract also organically complex metals. Properties of the soils collected in mining areas presented great variability, as they depend on materials where soils were developed, the complex mixture of heterogeneous wastes and the mining age. In the case of Caroline Mine in Hualgayoc (Perú), the mining is relatively modern and the available fraction of heavy metals of mine soils is low. The small available fraction concentration is due partly to both a few developed soil structure and low organic matter content. The only exception was the copper, with ranging from 1.2 to 36.2 % of total soil fraction. All plant species that were investigated in previous studies have a good ability to transport potential hazardous elements from the roots to the shoots and they have the ability to accumulate more than 1000 mg•kg-1 of heavy metals in the shoots. However, the bioconcentration factor was smaller than one for all the studied plants in

Distribution of Cd, Pb and Cu between dissolved fraction, inorganic particulate and phytoplankton in seawater of Terra Nova Bay (Ross Sea, Antarctica) during austral summer 2011-12.

PubMed

Illuminati, S; Annibaldi, A; Romagnoli, T; Libani, G; Antonucci, M; Scarponi, G; Totti, C; Truzzi, C

2017-10-01

During the austral summer 2011-2012, the metal quotas of Cd, Pb and Cu in the phytoplankton of Terra Nova Bay (TNB, Antarctica) were measured for the first time. Evolution of all the three metal distributions between dissolved and particulate fractions during the season was also evaluated. Metal concentrations were mainly affected by the dynamic of the pack ice melting and phytoplankton activity. In mid-December when TNB area was covered by a thick pack ice layer and phytoplankton activity was very low, all the three metals were present mainly in their dissolved species. When the pack ice started to melt and the water column characteristics became ideal (i.e. moderate stratification, ice free area), the phytoplankton bloom occurred. Cd showed a nutrient-type behaviour with dissolved and particulate fractions mainly influenced by phytoplankton activity. Cd quota showed a mean value of 0.12 ± 0.07 nmol L -1 (30-100% of the total particulate). Also Cu showed a nutrient-type behaviour, with its quota in phytoplankton varying between 0.08 and 2.1 nmol L -1 (20-100% of the total particulate). Pb features the typical distribution of a scavenged element with very low algal content (0.03 ± 0.02 nmol L -1 , representing 20-50% of the total particulate). The vertical distribution of this element was influenced by several factors (e.g. pack ice melting, atmospheric inputs), the phytoplankton activity affecting Pb behaviour only partially. Metal:C ratios provide valuable information on the biological requirements for Cd, Pb and Cu, leading us to better understand their biogeochemical cycles. Copyright © 2017 Elsevier Ltd. All rights reserved.

33 CFR 165.1182 - Safety/Security Zone: San Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA.

Code of Federal Regulations, 2012 CFR

2012-07-01

..., Carquinez Strait, and Suisun Bay, CA. (a) Regulated area. The following area is established as a moving... Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA. 165.1182 Section 165.1182 Navigation and... vessels transit from a line drawn between San Francisco Main Ship Channel buoys 7 and 8 (LLNR 4190 & 4195...

33 CFR 165.1182 - Safety/Security Zone: San Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA.

Code of Federal Regulations, 2011 CFR

2011-07-01

..., Carquinez Strait, and Suisun Bay, CA. (a) Regulated area. The following area is established as a moving... Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA. 165.1182 Section 165.1182 Navigation and... vessels transit from a line drawn between San Francisco Main Ship Channel buoys 7 and 8 (LLNR 4190 & 4195...

33 CFR 165.1182 - Safety/Security Zone: San Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA.

Code of Federal Regulations, 2013 CFR

2013-07-01

..., Carquinez Strait, and Suisun Bay, CA. (a) Regulated area. The following area is established as a moving... Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA. 165.1182 Section 165.1182 Navigation and... vessels transit from a line drawn between San Francisco Main Ship Channel buoys 7 and 8 (LLNR 4190 & 4195...

33 CFR 165.1182 - Safety/Security Zone: San Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., Carquinez Strait, and Suisun Bay, CA. (a) Regulated area. The following area is established as a moving... Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA. 165.1182 Section 165.1182 Navigation and... vessels transit from a line drawn between San Francisco Main Ship Channel buoys 7 and 8 (LLNR 4190 & 4195...

33 CFR 165.1182 - Safety/Security Zone: San Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

..., Carquinez Strait, and Suisun Bay, CA. (a) Regulated area. The following area is established as a moving... Francisco Bay, San Pablo Bay, Carquinez Strait, and Suisun Bay, CA. 165.1182 Section 165.1182 Navigation and... vessels transit from a line drawn between San Francisco Main Ship Channel buoys 7 and 8 (LLNR 4190 & 4195...

Bayés syndrome and acute cardioembolic ischemic stroke.

PubMed

Arboix, Adrià; Martí, Lucía; Dorison, Sebastien; Sánchez, María José

2017-03-16

Bayés syndrome is an under-recognized clinical condition characterized by advanced interatrial block. Bayés syndrome is a subclinical disease that manifests electrocardiographically as a prolonged P wave duration > 120 ms with biphasic morphology ± in the inferior leads. The clinical relevance of Bayés syndrome lies in the fact that is a clear arrhythmological syndrome and has a strong association with supraventricular arrhythmias, particularly atypical atrial flutter and atrial fibrillation. Likewise, Bayés syndrome has been recently identified as a novel risk factor for non-lacunar cardioembolic ischemic stroke and vascular dementia. Advanced interatrial block can be a risk for embolic stroke due to its known sequelae of left atrial dilation, left atrial electromechanical dysfunction or atrial tachyarrhythmia (paroxysmal or persistent atrial fibrillation), conditions predisposing to thromboembolism. Bayés syndrome may be responsible for some of the unexplained ischemic strokes and shall be considered and investigated as a possible cause for cryptogenetic stroke. In summary, Bayés syndrome is a poorly recognized cardiac rhythm disorder with important cardiologic and neurologic implications.

Changes in Chesapeake Bay Hypoxia over the Past Century

NASA Astrophysics Data System (ADS)

Friedrichs, M. A.; Kaufman, D. E.; Najjar, R.; Tian, H.; Zhang, B.; Yao, Y.

2016-02-01

The Chesapeake Bay, one of the world's largest estuaries, is among the many coastal systems where hypoxia is a major concern and where dissolved oxygen thus represents a critical factor in determining the health of the Bay's ecosystem. Over the past century, the population of the Chesapeake Bay region has almost quadrupled, greatly modifying land cover and management practices within the watershed. Simultaneously, the Chesapeake Bay has been experiencing a high degree of climate change, including increases in temperature, precipitation, and precipitation intensity. Together, these changes have resulted in significantly increased riverine nutrient inputs to the Bay. In order to examine how interdecadal changes in riverine nitrogen input affects biogeochemical cycling and dissolved oxygen concentrations in Chesapeake Bay, a land-estuarine-ocean biogeochemical modeling system has been developed for this region. Riverine inputs of nitrogen to the Bay are computed from a terrestrial ecosystem model (the Dynamic Land Ecosystem Model; DLEM) that resolves riverine discharge variability on scales of days to years. This temporally varying discharge is then used as input to the estuarine-carbon-biogeochemical model embedded in the Regional Modeling System (ROMS), which provides estimates of the oxygen concentrations and nitrogen fluxes within the Bay as well as advective exports from the Bay to the adjacent Mid-Atlantic Bight shelf. Simulation results from this linked modeling system for the present (early 2000s) have been extensively evaluated with in situ and remotely sensed data. Longer-term simulations are used to isolate the effect of increased riverine nitrogen loading on dissolved oxygen concentrations and biogeochemical cycling within the Chesapeake Bay.

Seasonal and Interannual Fast-Ice Variability from MODIS Surface-Temperature Anomalies, and its Link to External Forcings in Atka Bay, Antarctica

NASA Astrophysics Data System (ADS)

Paul, S.; Hoppmann, M.; Willmes, S.; Heinemann, G.

2016-12-01

Around Antarctica, sea ice is regularly attached to coastal features. These regions of mostly seasonal fast ice interact with the atmosphere, ocean and coastal ecosystem in a variety of ways. The growth and breakup cycles may depend on different factors, such as water- and air temperatures, wind conditions, tides, ocean swell, the passage of icebergs and the presence of nearby polynyas. However, a detailed understanding about the interaction between these factors and the fast-ice cycle is missing. In order to better understand the linkages between general fast-ice evolution and external forcing factors, we present results from an observational case study performed on the seasonal fast-ice cover of Atka Bay, eastern Weddell Sea. The ice conditions in this region are critical for the supply of the German wintering station Neumayer III. Moreover, the fast ice at Atka Bay hosts a unique ecosystem based on the presence of a sub-ice platelet layer and a large emperor penguin colony. While some qualitative characterizations on the seasonal fast-ice cycle in this region exist, no proper quantification was carried out to date. The backbone of this work is a new algorithm, which yields the first continuous time series of open-water fractions from Moderate-Resolution Imaging Spectroradiometer (MODIS) surface temperatures. The open-water fractions are derived from a range of running multi-day median temperature composites, utilizing the thermal footprint of warm open water and thin ice in contrast to cold pack-ice/ice-shelf areas. This unique, and manually validated dataset allows us to monitor changes in fast-ice extent on a near daily basis, for a period of 14 years (2002-2015). In a second step, we combine these results with iceberg observations, data from the meteorological observatory, and auxiliary satellite data in order to identify the main factors governing fast-ice formation and break-up.

Study of heavy metal concentration and partitioning in the Estrela River: implications for the pollution in Guanabara Bay – SE Brazil.

PubMed

Rangel, Carlos M A; Neto, José A Baptista; Fonseca, Estefan M; McAlister, John; Smith, Bernard J

2011-09-01

In this study, the geochemical analysis of ten sediment samples collected along the fluvial system of the Estrela River, which flows into the northern portion of Guanabara Bay, shows the presence of anthropogenic impacts in this area. Concentrations of Fe, Mn, Zn, Cu, Pb, Cr and Ni obtained were slightly higher, when compared with values found in natural environments. The particle size and organic matter content in most of the analyzed stations showed features not conducive to the accumulation of pollutants due to the low organic matter content and the strong presence of sand fraction. There was also the fractionation of heavy metals in sediments and it was found the prominence of residual and reducible phase, besides the significant occurrence of organic fractions in some analyzed stations. These factors, thus, highlight the potential risks of contamination, where the metals associated with the organic phase can become bioavailable in processes of dissolution, provided by physico-chemical changes that can occur in this aquatic environment.

Insulin-Like Growth Factor-1 Preserves Salivary Gland Function After Fractionated Radiation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Limesand, Kirsten H., E-mail: limesank@u.arizona.ed; Department of Nutritional Sciences, University of Arizona, Tucson, AZ; Avila, Jennifer L.

Purpose: Radiotherapy for head-and-neck cancer consists of fractionated radiation treatments that cause significant damage to salivary glands leading to chronic salivary gland dysfunction with only limited prevention and treatment options currently available. This study examines the feasibility of IGF-1 in preserving salivary gland function following a fractionated radiation treatment regimen in a pre-clinical model. Methods and Materials: Mice were exposed to fractionated radiation, and salivary gland function and histological analyses of structure, apoptosis, and proliferation were evaluated. Results: In this study, we report that treatment with fractionated doses of radiation results in a significant level of apoptotic cells in FVBmore » mice after each fraction, which is significantly decreased in transgenic mice expressing a constitutively active mutant of Akt1 (myr-Akt1). Salivary gland function is significantly reduced in FVB mice exposed to fractionated radiation; however, myr-Akt1 transgenic mice maintain salivary function under the same treatment conditions. Injection into FVB mice of recombinant insulin-like growth factor-1 (IGF-1), which activates endogenous Akt, suppressed acute apoptosis and preserved salivary gland function after fractionated doses of radiation 30 to 90 days after treatment. FVB mice exposed to fractionated radiation had significantly lower levels of proliferating cell nuclear antigen-positive salivary acinar cells 90 days after treatment, which correlated with a chronic loss of function. In contrast, FVB mice injected with IGF-1 before each radiation treatment exhibited acinar cell proliferation rates similar to those of untreated controls. Conclusion: These studies suggest that activation of IGF-1-mediated pathways before head-and-neck radiation could modulate radiation-induced salivary gland dysfunction and maintain glandular homeostasis.« less

Stable isotope tracing of anaerobic methane oxidation in the gassy sediments of Eckernfoerde Bay, German Baltic Sea

DOE Office of Scientific and Technical Information (OSTI.GOV)

Martens, C.S.; Albert, D.B.; Alperin, M.J.

Methane concentrations in the pore waters of Eckernfoerde Bay in the German Baltic Sea generally reach gas bubble saturation values within the upper meter of the sediment column. The depth at which saturation occurs is controlled by a balance between rates of methane production, consumption (oxidation), and transport. The relative importance of anaerobic methane oxidation (AMO) in controlling dissolved and gas bubble methane distributions in the bay's sediments is indirectly revealed through methane concentration versus depth profiles, depth variations in the stable C and H isotope composition of methane, and the C isotope composition of total dissolved inorganic carbon ({Sigma}CO{submore » 2}). Direct radiotracer measurements indicate that AMO rates of over 15 mM/yr are focused at the base of the sulfate reduction zone. Diagenetic equations that describe the depth destructions of the {delta}{sup 13}C and {delta}D values of methane reproduce isotopic shifts observed throughout the methane oxidation zone and are best fit with kinetic isotope fractionation factors of 1.012 {+-} 0.001 and 1.120 {plus{underscore}minus} 0.020 respectively.« less

Left-Turn Bays

DOT National Transportation Integrated Search

1996-05-01

The topic of left-turn bays (left-turn lanes) involves the following three issues: 1.) Warrants; 2.) Bay Length and 3.) Design Details. This discussion paper deals with warrants and bay length -- including queue storage at signalized and unsignalized...

Factors affecting the hydrochemistry of a mangrove tidal creek, sepetiba bay, Brazil

NASA Astrophysics Data System (ADS)

Ovalle, A. R. C.; Rezende, C. E.; Lacerda, L. D.; Silva, C. A. R.

1990-11-01

We studied the porewater chemistry, and spatial and temporal variation of mangrove creek hydrochemistry. Except for nitrate porewater, the concentrations of nutrients we analysed were higher than for creek water. Groundwater is a source of silica and phosphate, whereas total alkalinity and ammonium are related to mangrove porewater migration to the creek. Open bay waters contribute chlorine, dissolved oxygen and elevated pH. The results also suggest that nitrate is related to nitrification inside the creek. During flood tides, salinity, chlorine, dissolved oxygen and pH increase, whereas total alkalinity decreases. This pattern is reversed at ebb tides. Silica, phosphate, nitrate and ammonium show an erratic behaviour during the tidal cycle. Tidal dynamics, precipitation events and nitrification inside the creek were identified as major control factors and an estimate of tidal exchanges indicate that the system is in an equilibrium state.

Hierarchical Bayes approach for subgroup analysis.

PubMed

Hsu, Yu-Yi; Zalkikar, Jyoti; Tiwari, Ram C

2017-01-01

In clinical data analysis, both treatment effect estimation and consistency assessment are important for a better understanding of the drug efficacy for the benefit of subjects in individual subgroups. The linear mixed-effects model has been used for subgroup analysis to describe treatment differences among subgroups with great flexibility. The hierarchical Bayes approach has been applied to linear mixed-effects model to derive the posterior distributions of overall and subgroup treatment effects. In this article, we discuss the prior selection for variance components in hierarchical Bayes, estimation and decision making of the overall treatment effect, as well as consistency assessment of the treatment effects across the subgroups based on the posterior predictive p-value. Decision procedures are suggested using either the posterior probability or the Bayes factor. These decision procedures and their properties are illustrated using a simulated example with normally distributed response and repeated measurements.

Sedimentation and bathymetry changes in Suisun Bay: 1867-1990

USGS Publications Warehouse

Cappiella, Karen; Malzone, Chris; Smith, Richard; Jaffe, Bruce

1999-01-01

Understanding patterns of historical erosion and deposition in San Francisco Bay is crucial in managing such issues as locating deposits of sediment-associated contaminants, and the restoration of wetland areas. These problems were addressed by quantitatively examining historical hydrographic surveys. The data from five hydrographic surveys, made from 1867 to 1990, were analyzed using surface modeling software to determine long-term changes in the sediment system of Suisun Bay and surrounding areas. A surface grid displaying the bathymetry was created for each survey period, and the bathymetric change between survey periods was computed by differencing these grids. Patterns and volumes of erosion and deposition, sedimentation rates, and shoreline changes were derived from the resulting change grids. Approximately 115 million cubic meters of sediment were deposited in the Suisun Bay area from 1867 to 1887, the majority of which was debris from hydraulic gold mining in the Sierra Nevada. Just under two-thirds of the area of the study site was depositional during this time period, while less than one-third of it was erosional. However, over the entire study period, the Suisun Bay area lost sediment, indicating that a large amount of erosion occurred from1887 to 1990. In fact, this area lost sediment during each of the change periods between 1887 and 1990. Because erosion and deposition are processes that may vary over space and time, further analyses of more specific areas were done to examine spatial and temporal patterns. The change in the Suisun Bay area from being a largely depositional environment to an erosional one is the result of a combination of several factors. These factors include the regulation and subsequent cessation of hydraulic mining practices, and the increase in flood control and water distribution projects that have decreased sediment supply to the bay by reducing the frequency and duration of peak flow conditions. Another pattern shown by the

A review of circulation and mixing studies of San Francisco Bay, California

USGS Publications Warehouse

Smith, Lawrence H.

1987-01-01

influenced by delta discharge, and South Bay, a tributary estuary which responds to conditions in Central Bay. In the northern reach net circulation is characterized by the river-induced seaward, flow and a resulting gravitational circulation in the channels, and by a tide- and wind-induced net horizontal circulation. A surface layer of relatively fresh water in Central Bay generated by high delta discharges can induce gravitational circulation in South Bay. During low delta discharges South Bay has nearly the same salinity as Central Bay and is characterized by tide- and wind-induced net horizontal circulation. Several factors control the patterns of circulation and mixing in San Francisco Bay. Viewing circulation and mixing over different time-periods and at different geographic scales causes the influences of different factors to be emphasized. The exchange between the bay and coastal ocean and freshwater inflows determine the year-to-year behavior of San Francisco Bay as a freshwater-saltwater mixing zone. Within the bay, exchanges between the embayments control variations over a season. Circulation and mixing patterns within the embayments and the magnitude of river-induced seaward flow influence the between-bay exchanges. The within-bay patterns are in turn determined by tides, winds, and freshwater inflows. Because freshwater inflow is the only factor that can be managed, a major study focus is estimation of inflow-related effects. Most questions relate to the patterns of freshwater inflow necessary to protect valuable resources whose welfare is dependent on conditions in the bay. Among the important questions being addressed are: --What quantity of freshwater inflow is necessary to prevent salt intrusion into the Sacramento-San Joaquin Delta, and what salinity distributions in the bay would result from various inflow patterns? --What quantity of freshwater inflow is sufficient to flush pollutants through the bay? Knowledge of circul

33 CFR 100.919 - International Bay City River Roar, Bay City, MI.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false International Bay City River Roar, Bay City, MI. 100.919 Section 100.919 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Bay City River Roar, Bay City, MI. (a) Regulated Area. A regulated area is established to include all...

33 CFR 100.919 - International Bay City River Roar, Bay City, MI.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false International Bay City River Roar, Bay City, MI. 100.919 Section 100.919 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Bay City River Roar, Bay City, MI. (a) Regulated Area. A regulated area is established to include all...

Variations of summer phytoplankton community related to environmental factors in a macro-tidal estuarine embayment, Hangzhou Bay, China

NASA Astrophysics Data System (ADS)

Zhang, Yuexia; Yu, Jun; Jiang, Zhibing; Wang, Qin; Wang, Hui

2015-12-01

To explore the distribution and composition of phytoplankton community and their responses to environmental changes, summer net-collected phytoplankton and physicochemical parameters in the Hangzhou Bay during 2004-2010 were investigated. A total of four phyla and 84 species were identified, including 67 diatom and 12 dinoflagellate species. The dominant species constantly consisted of the diatoms, although the dominance of dinoflagellate and cyanobacteria increased recently. Due to great spatio-temporal variations in environmental factors (salinity, suspended solids, and nutrient concentration), significant heterogeneities in community compositions among different years and subregions (inner and middle sections, and bay mouth) were found based on the analyses of multidimensional scaling and similarity. Canonical correspondence analysis showed that salinity and Si/N were the main variables associated with algal assemblage. Compared with the historical data since the 1980s, eutrophication (N, P, and N/P increased with decreasing Si/N) was exacerbated drastically. Moreover, climatic forcing and human activities resulted in a series of physical alterations, including sediment retention, temperature increase, and salinity decrease as well as reduction in water exchanges. All these changes induced obvious increases in cell density and Chl- a while decreases in species diversity and diatom-dinoflagellate ratio as well as the shifting of dominant species. Therefore, the long-term phytoplankton variations were closely related to anthropogenic and climatic perturbations in the Hangzhou Bay.

Phase I study of BAY 94-9027, a PEGylated B-domain-deleted recombinant factor VIII with an extended half-life, in subjects with hemophilia A.

PubMed

Coyle, T E; Reding, M T; Lin, J C; Michaels, L A; Shah, A; Powell, J

2014-04-01

BAY 94-9027 is a B-domain-deleted recombinant factor VIII (rFVIII) with site-specific attachment of poly(ethylene glycol) that has shown an extended half-life in animal models of hemophilia. To assess the pharmacokinetics and safety of BAY 94-9027 after single and repeated administration in subjects with severe hemophilia A. This 8-week, prospective, multicenter, open-label, phase I trial was conducted in 14 subjects aged 21–58 years with FVIII of < 1%, ≥ 150 days of exposure to FVIII, and no history of FVIII inhibitors. After a ≥ 3-day washout, subjects received a single dose of sucrose-formulated rFVIII (rFVIII-FS) (cohort 1 [n = 7], 25 IU kg−1; cohort 2 [n = 7], 50 IU kg−1) for a 48-h pharmacokinetic (PK) study. After another ≥ 3-day washout, cohort 1 received twice-weekly BAY 94-9027 at 25 IU kg−1 (16 doses), and cohort 2 received once-weekly BAY 94-9027 at 60 IU kg−1 (nine doses). A 168-h PK study was performed after the first and last BAY 94-9027 doses. BAY 94-9027 showed equivalent recovery and an improved PK profile vs. rFVIII-FS, with a half-life of ~ 19 h (vs. ~ 13.0 h for rFVIII-FS). BAY 94-9027 was well tolerated, and no immunogenicity was observed. This phase I study demonstrates that BAY 94-9027 has an extended half-life in subjects with hemophilia A and, after multiple dosing, was well tolerated with no immunogenicity during the 8-week trial. A phase III study in a larger number of subjects is underway to fully characterize how this prolonged half-life will permit less frequent prophylaxis dosing for patients with hemophilia.

Jamaica Bay studies III: Abiotic determinants of distribution and abundance of gulls ( Larus)

NASA Astrophysics Data System (ADS)

Burger, Joanna

1983-02-01

The distribution and abundance of gulls were examined at Jamaica Bay Wildlife Refuge (New York) from 31 May 1978 to 31 May 1979. Gulls were found to be affected by tidal, temporal and weather-related factors. The distribution of gulls was affected primarily by tidal factors on the bay, and by temporal (seasonal, circadian) and weather-related factors on the freshwater ponds. The most important weather-related factors were temperature, wind velocity and wind direction. Herring ( L. argentatus), great black-backed ( L. fuscus) and ring-billed gulls ( L. delawarensis) fed on the bay at low tides, and used the ponds at high tide. Laughing gulls ( L. atricilla) fed on the bay at low tide and on rising tides. Herring and great black-backed gulls were present all year, but were most abundant in the winter, ring-billed gulls were abundant in spring and early fall, and laughing gulls were present in the summer following the breeding season but were absent in winter. Gulls used the ponds during high velocity, north winds, when they usually rested or preened. Multiple regression models were used to determine the factors explaining the variability in the numbers of gulls. Temporal variables were important contributors to accounting for the variability in the numbers of great black-backed and herring gulls only; tidal variables were significant for great black-backed and herring gulls on the bay, and for ring-billed and laughing gulls on all areas; and weather variables were significant for all species.

Radiocarbon ages of different fractions of peat on coastal lowland of Bohai Bay: marine influence?

NASA Astrophysics Data System (ADS)

Shang, Zhiwen; Wang, Fu; Fang, Jing; Li, Jianfen; Chen, Yongsheng; Jiang, Xingyu; Tian, Lizhu; Wang, Hong

2018-05-01

Peat in boreholes is the most important 14C dating material used for constructing age framework. 20 bulk peat samples were collected from five boreholes, the 14C ages of two fractions (organic sediment fraction and peat fraction) of the bulk peat samples were investigated by AMS-dating and which fraction is better to help construct an age framework for the boreholes were compared and discussed. The results indicated that the peat fraction give a good dating results sequence in the boreholes, compared with the corresponding organic sediment fraction. And the dating results of organic sediment fraction show 161-6 702 years older than corresponding peat fraction, which was caused by marine influence. Then, we suggest an experience formula as y=0.99x-466.5 by the correlation analysis for correcting the marine influenced organic sediment ages within the conventional ages between 4 000 to 9 000 yrs BP, and more study should be carried out for the AMS 14C dating of the bulk organic sediments.

Evolution of the Reactor Antineutrino Flux and Spectrum at Daya Bay

DOE PAGES

An, F. P.; Balantekin, A. B.; Band, H. R.; ...

2017-06-19

Here, the Daya Bay experiment has observed correlations between reactor core fuel evolution and changes in the reactor antineutrino flux and energy spectrum. Four antineutrino detectors in two experimental halls were used to identify 2.2 million inverse beta decays (IBDs) over 1230 days spanning multiple fuel cycles for each of six 2.9 GW th reactor cores at the Daya Bay and Ling Ao nuclear power plants. Using detector data spanning effective 239Pu fission fractions F 239 from 0.25 to 0.35, Daya Bay measures an average IBD yield ¯σf of (5.90±0.13)×10 –43 cm 2/fission and a fuel-dependent variation in the IBDmore » yield, dσ f/dF 239, of (–1.86±0.18)×10 –43 cm 2/fission. This observation rejects the hypothesis of a constant antineutrino flux as a function of the 239Pu fission fraction at 10 standard deviations. The variation in IBD yield is found to be energy dependent, rejecting the hypothesis of a constant antineutrino energy spectrum at 5.1 standard deviations. While measurements of the evolution in the IBD spectrum show general agreement with predictions from recent reactor models, the measured evolution in total IBD yield disagrees with recent predictions at 3.1σ. This discrepancy indicates that an overall deficit in the measured flux with respect to predictions does not result from equal fractional deficits from the primary fission isotopes 235U, 239Pu, 238U, and 241Pu. Based on measured IBD yield variations, yields of (6.17±0.17) and (4.27±0.26)×10 –43 cm 2/fission have been determined for the two dominant fission parent isotopes 235U and 239Pu. A 7.8% discrepancy between the observed and predicted 235U yields suggests that this isotope may be the primary contributor to the reactor antineutrino anomaly.« less

Evolution of the Reactor Antineutrino Flux and Spectrum at Daya Bay.

PubMed

An, F P; Balantekin, A B; Band, H R; Bishai, M; Blyth, S; Cao, D; Cao, G F; Cao, J; Chan, Y L; Chang, J F; Chang, Y; Chen, H S; Chen, Q Y; Chen, S M; Chen, Y X; Chen, Y; Cheng, J; Cheng, Z K; Cherwinka, J J; Chu, M C; Chukanov, A; Cummings, J P; Ding, Y Y; Diwan, M V; Dolgareva, M; Dove, J; Dwyer, D A; Edwards, W R; Gill, R; Gonchar, M; Gong, G H; Gong, H; Grassi, M; Gu, W Q; Guo, L; Guo, X H; Guo, Y H; Guo, Z; Hackenburg, R W; Hans, S; He, M; Heeger, K M; Heng, Y K; Higuera, A; Hsiung, Y B; Hu, B Z; Hu, T; Huang, E C; Huang, H X; Huang, X T; Huang, Y B; Huber, P; Huo, W; Hussain, G; Jaffe, D E; Jen, K L; Ji, X P; Ji, X L; Jiao, J B; Johnson, R A; Jones, D; Kang, L; Kettell, S H; Khan, A; Kohn, S; Kramer, M; Kwan, K K; Kwok, M W; Langford, T J; Lau, K; Lebanowski, L; Lee, J; Lee, J H C; Lei, R T; Leitner, R; Leung, J K C; Li, C; Li, D J; Li, F; Li, G S; Li, Q J; Li, S; Li, S C; Li, W D; Li, X N; Li, X Q; Li, Y F; Li, Z B; Liang, H; Lin, C J; Lin, G L; Lin, S; Lin, S K; Lin, Y-C; Ling, J J; Link, J M; Littenberg, L; Littlejohn, B R; Liu, J L; Liu, J C; Loh, C W; Lu, C; Lu, H Q; Lu, J S; Luk, K B; Ma, X Y; Ma, X B; Ma, Y Q; Malyshkin, Y; Martinez Caicedo, D A; McDonald, K T; McKeown, R D; Mitchell, I; Nakajima, Y; Napolitano, J; Naumov, D; Naumova, E; Ngai, H Y; Ochoa-Ricoux, J P; Olshevskiy, A; Pan, H-R; Park, J; Patton, S; Pec, V; Peng, J C; Pinsky, L; Pun, C S J; Qi, F Z; Qi, M; Qian, X; Qiu, R M; Raper, N; Ren, J; Rosero, R; Roskovec, B; Ruan, X C; Steiner, H; Stoler, P; Sun, J L; Tang, W; Taychenachev, D; Treskov, K; Tsang, K V; Tull, C E; Viaux, N; Viren, B; Vorobel, V; Wang, C H; Wang, M; Wang, N Y; Wang, R G; Wang, W; Wang, X; Wang, Y F; Wang, Z; Wang, Z; Wang, Z M; Wei, H Y; Wen, L J; Whisnant, K; White, C G; Whitehead, L; Wise, T; Wong, H L H; Wong, S C F; Worcester, E; Wu, C-H; Wu, Q; Wu, W J; Xia, D M; Xia, J K; Xing, Z Z; Xu, J L; Xu, Y; Xue, T; Yang, C G; Yang, H; Yang, L; Yang, M S; Yang, M T; Yang, Y Z; Ye, M; Ye, Z; Yeh, M; Young, B L; Yu, Z Y; Zeng, S; Zhan, L; Zhang, C; Zhang, C C; Zhang, H H; Zhang, J W; Zhang, Q M; Zhang, R; Zhang, X T; Zhang, Y M; Zhang, Y X; Zhang, Y M; Zhang, Z J; Zhang, Z Y; Zhang, Z P; Zhao, J; Zhou, L; Zhuang, H L; Zou, J H

2017-06-23

The Daya Bay experiment has observed correlations between reactor core fuel evolution and changes in the reactor antineutrino flux and energy spectrum. Four antineutrino detectors in two experimental halls were used to identify 2.2 million inverse beta decays (IBDs) over 1230 days spanning multiple fuel cycles for each of six 2.9 GW_{th} reactor cores at the Daya Bay and Ling Ao nuclear power plants. Using detector data spanning effective ^{239}Pu fission fractions F_{239} from 0.25 to 0.35, Daya Bay measures an average IBD yield σ[over ¯]_{f} of (5.90±0.13)×10^{-43}  cm^{2}/fission and a fuel-dependent variation in the IBD yield, dσ_{f}/dF_{239}, of (-1.86±0.18)×10^{-43}  cm^{2}/fission. This observation rejects the hypothesis of a constant antineutrino flux as a function of the ^{239}Pu fission fraction at 10 standard deviations. The variation in IBD yield is found to be energy dependent, rejecting the hypothesis of a constant antineutrino energy spectrum at 5.1 standard deviations. While measurements of the evolution in the IBD spectrum show general agreement with predictions from recent reactor models, the measured evolution in total IBD yield disagrees with recent predictions at 3.1σ. This discrepancy indicates that an overall deficit in the measured flux with respect to predictions does not result from equal fractional deficits from the primary fission isotopes ^{235}U, ^{239}Pu, ^{238}U, and ^{241}Pu. Based on measured IBD yield variations, yields of (6.17±0.17) and (4.27±0.26)×10^{-43}  cm^{2}/fission have been determined for the two dominant fission parent isotopes ^{235}U and ^{239}Pu. A 7.8% discrepancy between the observed and predicted ^{235}U yields suggests that this isotope may be the primary contributor to the reactor antineutrino anomaly.

Evolution of the Reactor Antineutrino Flux and Spectrum at Daya Bay

NASA Astrophysics Data System (ADS)

An, F. P.; Balantekin, A. B.; Band, H. R.; Bishai, M.; Blyth, S.; Cao, D.; Cao, G. F.; Cao, J.; Chan, Y. L.; Chang, J. F.; Chang, Y.; Chen, H. S.; Chen, Q. Y.; Chen, S. M.; Chen, Y. X.; Chen, Y.; Cheng, J.; Cheng, Z. K.; Cherwinka, J. J.; Chu, M. C.; Chukanov, A.; Cummings, J. P.; Ding, Y. Y.; Diwan, M. V.; Dolgareva, M.; Dove, J.; Dwyer, D. A.; Edwards, W. R.; Gill, R.; Gonchar, M.; Gong, G. H.; Gong, H.; Grassi, M.; Gu, W. Q.; Guo, L.; Guo, X. H.; Guo, Y. H.; Guo, Z.; Hackenburg, R. W.; Hans, S.; He, M.; Heeger, K. M.; Heng, Y. K.; Higuera, A.; Hsiung, Y. B.; Hu, B. Z.; Hu, T.; Huang, E. C.; Huang, H. X.; Huang, X. T.; Huang, Y. B.; Huber, P.; Huo, W.; Hussain, G.; Jaffe, D. E.; Jen, K. L.; Ji, X. P.; Ji, X. L.; Jiao, J. B.; Johnson, R. A.; Jones, D.; Kang, L.; Kettell, S. H.; Khan, A.; Kohn, S.; Kramer, M.; Kwan, K. K.; Kwok, M. W.; Langford, T. J.; Lau, K.; Lebanowski, L.; Lee, J.; Lee, J. H. C.; Lei, R. T.; Leitner, R.; Leung, J. K. C.; Li, C.; Li, D. J.; Li, F.; Li, G. S.; Li, Q. J.; Li, S.; Li, S. C.; Li, W. D.; Li, X. N.; Li, X. Q.; Li, Y. F.; Li, Z. B.; Liang, H.; Lin, C. J.; Lin, G. L.; Lin, S.; Lin, S. K.; Lin, Y.-C.; Ling, J. J.; Link, J. M.; Littenberg, L.; Littlejohn, B. R.; Liu, J. L.; Liu, J. C.; Loh, C. W.; Lu, C.; Lu, H. Q.; Lu, J. S.; Luk, K. B.; Ma, X. Y.; Ma, X. B.; Ma, Y. Q.; Malyshkin, Y.; Martinez Caicedo, D. A.; McDonald, K. T.; McKeown, R. D.; Mitchell, I.; Nakajima, Y.; Napolitano, J.; Naumov, D.; Naumova, E.; Ngai, H. Y.; Ochoa-Ricoux, J. P.; Olshevskiy, A.; Pan, H.-R.; Park, J.; Patton, S.; Pec, V.; Peng, J. C.; Pinsky, L.; Pun, C. S. J.; Qi, F. Z.; Qi, M.; Qian, X.; Qiu, R. M.; Raper, N.; Ren, J.; Rosero, R.; Roskovec, B.; Ruan, X. C.; Steiner, H.; Stoler, P.; Sun, J. L.; Tang, W.; Taychenachev, D.; Treskov, K.; Tsang, K. V.; Tull, C. E.; Viaux, N.; Viren, B.; Vorobel, V.; Wang, C. H.; Wang, M.; Wang, N. Y.; Wang, R. G.; Wang, W.; Wang, X.; Wang, Y. F.; Wang, Z.; Wang, Z.; Wang, Z. M.; Wei, H. Y.; Wen, L. J.; Whisnant, K.; White, C. G.; Whitehead, L.; Wise, T.; Wong, H. L. H.; Wong, S. C. F.; Worcester, E.; Wu, C.-H.; Wu, Q.; Wu, W. J.; Xia, D. M.; Xia, J. K.; Xing, Z. Z.; Xu, J. L.; Xu, Y.; Xue, T.; Yang, C. G.; Yang, H.; Yang, L.; Yang, M. S.; Yang, M. T.; Yang, Y. Z.; Ye, M.; Ye, Z.; Yeh, M.; Young, B. L.; Yu, Z. Y.; Zeng, S.; Zhan, L.; Zhang, C.; Zhang, C. C.; Zhang, H. H.; Zhang, J. W.; Zhang, Q. M.; Zhang, R.; Zhang, X. T.; Zhang, Y. M.; Zhang, Y. X.; Zhang, Y. M.; Zhang, Z. J.; Zhang, Z. Y.; Zhang, Z. P.; Zhao, J.; Zhou, L.; Zhuang, H. L.; Zou, J. H.; Daya Bay Collaboration

2017-06-01

The Daya Bay experiment has observed correlations between reactor core fuel evolution and changes in the reactor antineutrino flux and energy spectrum. Four antineutrino detectors in two experimental halls were used to identify 2.2 million inverse beta decays (IBDs) over 1230 days spanning multiple fuel cycles for each of six 2.9 G Wth reactor cores at the Daya Bay and Ling Ao nuclear power plants. Using detector data spanning effective 239Pu fission fractions F239 from 0.25 to 0.35, Daya Bay measures an average IBD yield σ¯f of (5.90 ±0.13 )×10-43 cm2/fission and a fuel-dependent variation in the IBD yield, d σf/d F239, of (-1.86 ±0.18 )×10-43 cm2/fission . This observation rejects the hypothesis of a constant antineutrino flux as a function of the 239Pu fission fraction at 10 standard deviations. The variation in IBD yield is found to be energy dependent, rejecting the hypothesis of a constant antineutrino energy spectrum at 5.1 standard deviations. While measurements of the evolution in the IBD spectrum show general agreement with predictions from recent reactor models, the measured evolution in total IBD yield disagrees with recent predictions at 3.1 σ . This discrepancy indicates that an overall deficit in the measured flux with respect to predictions does not result from equal fractional deficits from the primary fission isotopes 235U, 239Pu, 238U, and 241Pu. Based on measured IBD yield variations, yields of (6.17 ±0.17 ) and (4.27 ±0.26 )×10-43 cm2 /fission have been determined for the two dominant fission parent isotopes 235U and 239Pu. A 7.8% discrepancy between the observed and predicted 235U yields suggests that this isotope may be the primary contributor to the reactor antineutrino anomaly.

Evolution of the Reactor Antineutrino Flux and Spectrum at Daya Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

An, F. P.; Balantekin, A. B.; Band, H. R.

Here, the Daya Bay experiment has observed correlations between reactor core fuel evolution and changes in the reactor antineutrino flux and energy spectrum. Four antineutrino detectors in two experimental halls were used to identify 2.2 million inverse beta decays (IBDs) over 1230 days spanning multiple fuel cycles for each of six 2.9 GW th reactor cores at the Daya Bay and Ling Ao nuclear power plants. Using detector data spanning effective 239Pu fission fractions F 239 from 0.25 to 0.35, Daya Bay measures an average IBD yield ¯σf of (5.90±0.13)×10 –43 cm 2/fission and a fuel-dependent variation in the IBDmore » yield, dσ f/dF 239, of (–1.86±0.18)×10 –43 cm 2/fission. This observation rejects the hypothesis of a constant antineutrino flux as a function of the 239Pu fission fraction at 10 standard deviations. The variation in IBD yield is found to be energy dependent, rejecting the hypothesis of a constant antineutrino energy spectrum at 5.1 standard deviations. While measurements of the evolution in the IBD spectrum show general agreement with predictions from recent reactor models, the measured evolution in total IBD yield disagrees with recent predictions at 3.1σ. This discrepancy indicates that an overall deficit in the measured flux with respect to predictions does not result from equal fractional deficits from the primary fission isotopes 235U, 239Pu, 238U, and 241Pu. Based on measured IBD yield variations, yields of (6.17±0.17) and (4.27±0.26)×10 –43 cm 2/fission have been determined for the two dominant fission parent isotopes 235U and 239Pu. A 7.8% discrepancy between the observed and predicted 235U yields suggests that this isotope may be the primary contributor to the reactor antineutrino anomaly.« less

77 FR 70891 - Safety Zone; Bay Bridge Construction, San Francisco Bay, San Francisco, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2012-11-28

...-AA00 Safety Zone; Bay Bridge Construction, San Francisco Bay, San Francisco, CA AGENCY: Coast Guard... the navigable waters of the San Francisco Bay near Yerba Buena Island, CA in support of the Bay Bridge... construction of the Bay Bridge, the safety zone is necessary to provide for the safety of mariners transiting...

An energetic scale for equilibrium H/D fractionation factors illuminates hydrogen bond free energies in proteins

PubMed Central

Cao, Zheng; Bowie, James U

2014-01-01

Equilibrium H/D fractionation factors have been extensively employed to qualitatively assess hydrogen bond strengths in protein structure, enzyme active sites, and DNA. It remains unclear how fractionation factors correlate with hydrogen bond free energies, however. Here we develop an empirical relationship between fractionation factors and free energy, allowing for the simple and quantitative measurement of hydrogen bond free energies. Applying our empirical relationship to prior fractionation factor studies in proteins, we find: [1] Within the folded state, backbone hydrogen bonds are only marginally stronger on average in α-helices compared to β-sheets by ∼0.2 kcal/mol. [2] Charge-stabilized hydrogen bonds are stronger than neutral hydrogen bonds by ∼2 kcal/mol on average, and can be as strong as –7 kcal/mol. [3] Changes in a few hydrogen bonds during an enzyme catalytic cycle can stabilize an intermediate state by –4.2 kcal/mol. [4] Backbone hydrogen bonds can make a large overall contribution to the energetics of conformational changes, possibly playing an important role in directing conformational changes. [5] Backbone hydrogen bonding becomes more uniform overall upon ligand binding, which may facilitate participation of the entire protein structure in events at the active site. Our energetic scale provides a simple method for further exploration of hydrogen bond free energies. PMID:24501090

Antinutritional factors and functionality of protein-rich fractions of industrial guar meal as affected by heat processing.

PubMed

Nidhina, N; Muthukumar, S P

2015-04-15

Proximate composition analysis and antinutritional factor composition of different fractions of industrial guar meal: raw churi (IRC), heated churi (IHC), final churi (IFC) and guar korma (IGK) were studied and compared. Protein content was found to be very high in IGK (52.7%) when compared to the churi fractions (32-33%) and the trypsin inhibitor activities were found to be negligible in all the fractions (0.58-1.8 mg/g). Single fraction (IGK) was selected for further studies, based on the protein content. The antinutritional factors of selected fractions were significantly reduced by different heat treatments. Heat treatments significantly increased the water absorbing capacity of IGK, but reduced the nitrogen solubility, emulsifying and foaming capacity. Highest L(∗) value was observed for boiled IGK, highest a(∗) and b(∗) values for roasted IGK, during colour measurement. FTIR spectral analysis revealed the presence several aromatic groups in IGK and slight modifications in the molecular structure during heat treatments. Copyright © 2014 Elsevier Ltd. All rights reserved.

Experimental investigation on V isotope equilibrium fractionation factor between metal and silicate melt

NASA Astrophysics Data System (ADS)

Zhang, S.; Zhang, H.; Huang, F.

2017-12-01

Equilibrium fractionation factors of stable isotopes between metal and silicate melt are of vital importance for understanding the isotope variations within meteorites and planetary bodies. The V isotope composition (reported as δ51V = 1000 × [(51V/50Vsample/51V/50VAA)-1] ) of the bulk silicate Earth (BSE) has been estimated as δ51V = -0.7 ± 0.2‰ (2sd) [1], which is significantly heavier than most meteorites by 1‰ [2]. Such isotopic offset may provide insights for the core formation and core-mantle segregation. Therefore, it is important to understand V isotope equilibrium fractionation factor between silicate melt and metal. Nielsen et al. (2014) [2] had performed 3 experiments using starting materials of pure Fe metal and An50Di28Fo22 composition, revealing no resolvable V isotope fractionation. However, it is not clear whether chemical compositions in the melts can affect V isotope fractionations. Therefore, we experimentally calibrated equilibrium V isotope fractionation between Fe metallic and basaltic melt, with particular focus on the effect of Ni and other light elements. Experiments were performed at 1 GPa and 1600 oC using a 3/4″ end-loaded piston cylinder. The starting materials consisted of 1:1 mixture of pure Fe metal and basaltic composition [3]. The isotope equilibrium was assessed using time series experiments combined with the reverse reaction method. Carbon saturation and C-free experiments were achieved by using graphite and silica capsules, respectively. The Ni series experiments were doped with 6 wt% Ni into the starting Fe metal. The metal and silicate phases of samples were mechanically separated, V was purified using a chromatographic technique, and V isotope ratios were measured using MC-ICP-MS [4]. Carbon saturation, C-free experiments and Ni series experiment all show non-resolvable V isotope fractionation between metal and basaltic melt, which indicates that the presence of C and Ni could not affect V isotope fractionation

33 CFR 100.112 - Swim the Bay, Narragansett Bay, Narragansett, RI.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Swim the Bay, Narragansett Bay, Narragansett, RI. 100.112 Section 100.112 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.112 Swim the Bay...

Microcontaminants and reproductive impairment of the Forster's tern on Green Bay, Lake Michigan,1983

USGS Publications Warehouse

Kubiak, T.J.; Harris, H.J.; Smith, L.M.; Schwartz, T.R.; Stalling, D.L.; Trick, J.A.; Sileo, L.; Docherty, D.E.; Erdman, T.C.

1989-01-01

Poygan adults in an egg-exchange experiment, but was sharply decreased in Lake Poygan eggs incubated in Green Bay nests. Nest abandonment and egg disappearance were substantial at Green Bay but nil at Lake Poygan. Thus, not only factors intrinsic to the egg, but also extrinsic factors (parental attentiveness), impaired reproductive outcome at Green Bay. The epidemiological evidence from this study strongly suggested that contaminants were a causal factor. AHH-active PCB congeners (intrinsic effects) and PCBs in general (extrinsic effects) appeared to be the only contaminants at the concentrations measured in eggs, capable of producing the effects that were observed at Green Bay.

Wind-Driven Waves in Tampa Bay, Florida

NASA Astrophysics Data System (ADS)

Gilbert, S. A.; Meyers, S. D.; Luther, M. E.

2002-12-01

Turbidity and nutrient flux due to sediment resuspension by waves and currents are important factors controlling water quality in Tampa Bay. During December 2001 and January 2002, four Sea Bird Electronics SeaGauge wave and tide recorders were deployed in Tampa Bay in each major bay segment. Since May 2002, a SeaGauge has been continuously deployed at a site in middle Tampa Bay as a component of the Bay Regional Atmospheric Chemistry Experiment (BRACE). Initial results for the summer 2002 data indicate that significant wave height is linearly dependent on wind speed and direction over a range of 1 to 12 m/s. The data were divided into four groups according to wind direction. Wave height dependence on wind speed was examined for each group. Both northeasterly and southwesterly winds force significant wave heights that are about 30% larger than those for northwesterly and southeasterly winds. This difference is explained by variations in fetch due to basin shape. Comparisons are made between these observations and the results of a SWAN-based model of Tampa Bay. The SWAN wave model is coupled to a three-dimensional circulation model and computes wave spectra at each model grid cell under observed wind conditions and modeled water velocity. When SWAN is run without dissipation, the model results are generally similar in wave period but about 25%-50% higher in significant wave height than the observations. The impact of various dissipation mechanisms such as bottom drag and whitecapping on the wave state is being investigated. Preliminary analyses on winter data give similar results.

A variational Bayes discrete mixture test for rare variant association

PubMed Central

Logsdon, Benjamin A.; Dai, James Y.; Auer, Paul L.; Johnsen, Jill M.; Ganesh, Santhi K.; Smith, Nicholas L.; Wilson, James G.; Tracy, Russell P.; Lange, Leslie A.; Jiao, Shuo; Rich, Stephen S.; Lettre, Guillaume; Carlson, Christopher S.; Jackson, Rebecca D.; O’Donnell, Christopher J.; Wurfel, Mark M.; Nickerson, Deborah A.; Tang, Hua; Reiner, Alexander P.; Kooperberg, Charles

2014-01-01

Recently, many statistical methods have been proposed to test for associations between rare genetic variants and complex traits. Most of these methods test for association by aggregating genetic variations within a predefined region, such as a gene. Although there is evidence that “aggregate” tests are more powerful than the single marker test, these tests generally ignore neutral variants and therefore are unable to identify specific variants driving the association with phenotype. We propose a novel aggregate rare-variant test that explicitly models a fraction of variants as neutral, tests associations at the gene-level, and infers the rare-variants driving the association. Simulations show that in the practical scenario where there are many variants within a given region of the genome with only a fraction causal our approach has greater power compared to other popular tests such as the Sequence Kernel Association Test (SKAT), the Weighted Sum Statistic (WSS), and the collapsing method of Morris and Zeggini (MZ). Our algorithm leverages a fast variational Bayes approximate inference methodology to scale to exome-wide analyses, a significant computational advantage over exact inference model selection methodologies. To demonstrate the efficacy of our methodology we test for associations between von Willebrand Factor (VWF) levels and VWF missense rare-variants imputed from the National Heart, Lung, and Blood Institute’s Exome Sequencing project into 2,487 African Americans within the VWF gene. Our method suggests that a relatively small fraction (~10%) of the imputed rare missense variants within VWF are strongly associated with lower VWF levels in African Americans. PMID:24482836

A variational Bayes discrete mixture test for rare variant association.

PubMed

Logsdon, Benjamin A; Dai, James Y; Auer, Paul L; Johnsen, Jill M; Ganesh, Santhi K; Smith, Nicholas L; Wilson, James G; Tracy, Russell P; Lange, Leslie A; Jiao, Shuo; Rich, Stephen S; Lettre, Guillaume; Carlson, Christopher S; Jackson, Rebecca D; O'Donnell, Christopher J; Wurfel, Mark M; Nickerson, Deborah A; Tang, Hua; Reiner, Alexander P; Kooperberg, Charles

2014-01-01

Recently, many statistical methods have been proposed to test for associations between rare genetic variants and complex traits. Most of these methods test for association by aggregating genetic variations within a predefined region, such as a gene. Although there is evidence that "aggregate" tests are more powerful than the single marker test, these tests generally ignore neutral variants and therefore are unable to identify specific variants driving the association with phenotype. We propose a novel aggregate rare-variant test that explicitly models a fraction of variants as neutral, tests associations at the gene-level, and infers the rare-variants driving the association. Simulations show that in the practical scenario where there are many variants within a given region of the genome with only a fraction causal our approach has greater power compared to other popular tests such as the Sequence Kernel Association Test (SKAT), the Weighted Sum Statistic (WSS), and the collapsing method of Morris and Zeggini (MZ). Our algorithm leverages a fast variational Bayes approximate inference methodology to scale to exome-wide analyses, a significant computational advantage over exact inference model selection methodologies. To demonstrate the efficacy of our methodology we test for associations between von Willebrand Factor (VWF) levels and VWF missense rare-variants imputed from the National Heart, Lung, and Blood Institute's Exome Sequencing project into 2,487 African Americans within the VWF gene. Our method suggests that a relatively small fraction (~10%) of the imputed rare missense variants within VWF are strongly associated with lower VWF levels in African Americans.

An improved optimization algorithm and Bayes factor termination criterion for sequential projection pursuit

DOE Office of Scientific and Technical Information (OSTI.GOV)

Webb-Robertson, Bobbie-Jo M.; Jarman, Kristin H.; Harvey, Scott D.

2005-05-28

A fundamental problem in analysis of highly multivariate spectral or chromatographic data is reduction of dimensionality. Principal components analysis (PCA), concerned with explaining the variance-covariance structure of the data, is a commonly used approach to dimension reduction. Recently an attractive alternative to PCA, sequential projection pursuit (SPP), has been introduced. Designed to elicit clustering tendencies in the data, SPP may be more appropriate when performing clustering or classification analysis. However, the existing genetic algorithm (GA) implementation of SPP has two shortcomings, computation time and inability to determine the number of factors necessary to explain the majority of the structure inmore » the data. We address both these shortcomings. First, we introduce a new SPP algorithm, a random scan sampling algorithm (RSSA), that significantly reduces computation time. We compare the computational burden of the RSS and GA implementation for SPP on a dataset containing Raman spectra of twelve organic compounds. Second, we propose a Bayes factor criterion, BFC, as an effective measure for selecting the number of factors needed to explain the majority of the structure in the data. We compare SPP to PCA on two datasets varying in type, size, and difficulty; in both cases SPP achieves a higher accuracy with a lower number of latent variables.« less

75 FR 36292 - Safety Zone; Bay Swim III, Presque Isle Bay, Erie, PA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-25

... of Presque Isle Bay, Lake Erie, near Erie, Pennsylvania between 9 a.m. to 11 a.m. on June 26, 2010.... The safety zone will encompass specified waters of Presque Isle Bay, Erie, Pennsylvania starting at...-AA00 Safety Zone; Bay Swim III, Presque Isle Bay, Erie, PA AGENCY: Coast Guard, DHS. ACTION: Temporary...

Organic Matter Remineralization Predominates Phosphorus Cycling in the Mid-Bay Sediments in the Chesapeake Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sunendra, Joshi R.; Kukkadapu, Ravi K.; Burdige, David J.

2015-05-19

The Chesapeake Bay, the largest and most productive estuary in the US, suffers from varying degrees of water quality issues fueled by both point and non–point source nutrient sources. Restoration of the bay is complicated by the multitude of nutrient sources, their variable inputs and hydrological conditions, and complex interacting factors including climate forcing. These complexities not only restrict formulation of effective restoration plans but also open up debates on accountability issues with nutrient loading. A detailed understanding of sediment phosphorus (P) dynamics enables one to identify the exchange of dissolved constituents across the sediment- water interface and aid tomore » better constrain mechanisms and processes controlling the coupling between the sediments and the overlying waters. Here we used phosphate oxygen isotope ratios (δ18Op) in concert with sediment chemistry, XRD, and Mössbauer spectroscopy on the sediment retrieved from an organic rich, sulfidic site in the meso-haline portion of the mid-bay to identify sources and pathway of sedimentary P cycling and to infer potential feedback effect on bottom water hypoxia and surface water eutrophication. Isotope data indicate that the regeneration of inorganic P from organic matter degradation (remineralization) is the predominant, if not sole, pathway for authigenic P precipitation in the mid-bay sediments. We interpret that the excess inorganic P generated by remineralization should have overwhelmed any bottom-water and/or pore-water P derived from other sources or biogeochemical processes and exceeded saturation with respect to authigenic P precipitation. It is the first research that identifies the predominance of remineralization pathway against remobilization (coupled Fe-P cycling) pathway in the Chesapeake Bay. Therefore, these results are expected to have significant implications for the current understanding of P cycling and benthic-pelagic coupling in the bay, particularly on

Structure, age and origin of the bay-mouth shoal deposits, Chesapeake Bay, Virginia

USGS Publications Warehouse

Colman, Steven M.; Berquist, C.R.; Hobbs, C. H.

1988-01-01

The mouth of Chesapeake Bay contains a distinctive shoal complex and related deposits that result from the complex interaction of three different processes: (1) progradation of a barrier spit at the southern end of the Delmarva Peninsula, (2) strong, reversing tidal currents that transport and rework sediment brought to the bay mouth from the north, and (3) landward (bayward) net non-tidal circulation and sediment transport. Together, these processes play a major role in changing the configuration of the estuary and filling it with sediment. The deposits at the mouth of the bay hold keys both to the evolution of the bay during the Holocene transgression and to the history of previous generations of the bay. The deposit associated with the shoals at the mouth of the bay, the bay-mouth sand, is a distinct stratigraphic unit composed mostly of uniform, gray, fine sand. The position and internal structure of the unit shows that it is related to near-present sea level, and thus is less than a few thousand years old. The processes affecting the upper surface of the deposit and the patterns of erosion and deposition at this surface are complex, but the geometry and structure of the deposit indicate that it is a coherent unit that is prograding bayward and tending to fill the estuary. The source of the bay-mouth sand is primarily outside the bay in the nearshore zone of the Delmarva Peninsula and on the inner continental shelf. The internal structure of the deposit, its surface morphology, its heavy-mineral composition, bottom-current studies, comparative bathymetry, and sediment budgets all suggest that sand is brought to the bay mouth by southerly longshore drift along the Delmarva Peninsula and then swept into the bay. In addition to building the southward- and bayward-prograding bay-mouth sand, these processes result in sand deposition tens of kilometers into the bay. ?? 1988.

Stable-isotope analysis of canvasback winter diet in upper Chesapeake Bay

USGS Publications Warehouse

Haramis, G.M.; Jorde, Dennis G.; Macko, S.A.; Walker, J.L.

2001-01-01

A major decline in submerged aquatic vegetation (SAV) in Chesapeake Bay has altered the diet of wintering Canvasbacks (Aythya valisineria) from historically plant to a combination of benthic animal foods, especially the ubiquitous Baltic clam (Macoma balthica), supplemented with anthropogenic corn (Zea mays). Because the isotopic signature of corn is readily discriminated from bay benthos, but not SAV, we used stable-isotope methodology to investigate the corn–SAV component of the winter diet of Canvasbacks. Feeding trials with penned Canvasbacks were conducted to establish turnover rates and fractionation end-point loci of δ13C and δ15N signatures of whole blood for individual ducks fed ad libitum diets of (1) Baltic clams, (2) Baltic clams and corn, and (3) tubers of wild celery (Vallisneria americana). Turnover time constants averaged 4.5 weeks, indicating that signatures of wild ducks would be representative of bay diets by late February. Isotopic signatures of wild Canvasbacks sampled in February fell on a continuum between end-point loci for the Baltic clam and the combination Baltic clam and corn diet. Although that finding verifies a clear dependence on corn–SAV for wintering Canvasbacks, it also reveals that not enough corn–SAV is available to establish ad libitum consumption for the 15,000+ Canvasbacks wintering in the upper bay. On the basis of mean δ13C signature of bay Canvasbacks (n = 59) and ingestion rates from feeding trials, we estimated that 258 kg corn per day would account for the observed δ13C enrichment and supply 18% of daily energetic needs for 15,000 Canvasbacks. That level of corn availability is so realistic that we conclude that SAV is likely of little dietary importance to Canvasbacks in that portion of the bay.

Distribution of polycyclic aromatic hydrocarbons in southern Chesapeake Bay surface water: Evaluation of three methods for determining freely dissolved water concentrations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gustafson, K.E.; Dickhut, R.M.

1997-03-01

Gas sparging, semipermeable-membrane devices (SPMDs), and filtration with sorption of dissolved polycyclic aromatic hydrocarbons (PAHs) to XAD-2 resin were evaluated for determining the concentrations of freely dissolved PAHs in estuarine waters of southern Chesapeake Bay at sites ranging from rural to urban and highly industrialized. Gas sparging had significant sampling artifacts due to particle scavenging by rising bubbles, and SPMDs were kinetically limited for four-ring and larger PAHs relative to short-term temporal changes in water concentrations. Filtration with sorption of the dissolved contaminant fraction to XAD-2 resin was found to be the most accurate and feasible method for determining concentrationsmore » of freely dissolved PAHs in estuarine water. Concentrations and distribution coefficients of dissolved and particulate PAHs were measured using the filtration/XAD-2 method. Concentrations of PAHs in surface waters of southern Chesapeake Bay were higher than those reported for the northern bay; concentrations in the Elizabeth River were elevated relative to all other sites. A gradient for particulate PAHs was observed from urban to remote sites. No seasonal trends were observed in dissolved or particle-bound PAH fractions at any site. Distributions of dissolved and particulate PAHs in surface waters of the Chesapeake Bay are near equilibrium at all locations and during all seasons.« less

33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. 162.125 Section 162.125 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY INLAND WATERWAYS NAVIGATION REGULATIONS § 162.125 Sturgeon Bay and the Sturgeon Bay Ship...

Pb’s high sedimentation inside the bay mouth of Jiaozhou Bay

NASA Astrophysics Data System (ADS)

Yang, Dongfang; Miao, Zhenqing; Huang, Xinmin; Wei, Linzhen; Feng, Ming

2017-12-01

Sedimentation is one of the key environmental behaviors of pollutants in the ocean. This paper analyzed the seasonal and temporal variations of Pb’s sedimentation process in Jiaozhou Bay in 1987. Results showed that Pb contents in bottom waters in Jiaozhou Bay in May, July and November 1987 were 1.87-2.60 μg L-1, 15.11-19.68 μg L-1 and 11.08-15.18 μg L-1, and the pollution levels of Pb in May, July and November 1987 were slight, heavy and heavy, respectively. In May 1987, there was low sedimentation process in waters in the outside of the bay mouth, yet were high sedimentation process in waters in the middle and inside of the bay mouth. In July and November 1987, there was low sedimentation process in waters in the outside of the bay mouth, yet were high sedimentation process in waters in the inside of the bay mouth. The seasonal-temporal variation of sedimentation processes of Pb were determined by the variations of sources input and the vertical water’s effect.

Impact evaluation of the industrial activities in the Bay of Bakar (Adriatic Sea, Croatia): recent benthic foraminifera and heavy metals.

PubMed

Popadić, Adriana; Vidović, Jelena; Cosović, Vlasta; Medaković, Davorin; Dolenec, Matej; Felja, Igor

2013-11-15

The Bay of Bakar is one of the most heavily polluted bays at the Eastern Adriatic. Three major industrial companies potentially endanger the bay. The concentration of major, minor and trace elements in surface sediments from thirteen stations was discussed in relation to the sediment type and foraminiferal assemblages. The distribution of major elements in the bay is influenced by geological nature of surroundings. Heavy metal distribution depends on pollution sources and on amount of mud fraction: fine-grained sediments are enriched by them in comparison with coarse-grained ones. Different sediment quality criteria complicate the pollution assessment in the bay. Heavy metal concentrations generally fall into allowed depositional values for marine environments; only area in front of the coke plant and the City of Bakar harbor is heavily polluted. Stress-tolerant foraminiferal species dominate at stations with higher concentrations of heavy metals and coarse-grained sediments consist of larger number of epifaunal taxa. Copyright © 2013 Elsevier Ltd. All rights reserved.

TRUST trial: BAY 86-6150 use in haemophilia with inhibitors and assessment for immunogenicity.

PubMed

Mahlangu, J; Paz, P; Hardtke, M; Aswad, F; Schroeder, J

2016-11-01

The most serious and challenging complication of haemophilia treatment is development of inhibitors to replacement factors VIII or IX. Innovative therapies currently being explored for patients with haemophilia and inhibitors include BAY 86-6150, a modified recombinant activated factor VII (FVIIa). Immunogenicity remains a substantial barrier in this endeavour. To present safety and efficacy results of the BAY 86-6150 study in patients with inhibitors and report detailed analysis of epitope mapping in a patient who developed anti-BAY 86-6150 antibodies. Patients aged 12-62 years with moderate or severe haemophilia A or B were eligible for the phase 3 TRUST trial if they had a history of high-titre inhibitors. Four escalating doses of BAY 86-6150 (6.5, 20, 50, 90 μg kg -1 ) were planned with ≥10 patients per dose level. Bleeding episodes were treated with BAY 86-6150. Development of anti-BAY 86-6150 antibodies was considered a serious adverse event. TRUST was discontinued after one patient in the 6.5-μg kg -1 cohort developed anti-BAY 86-6150 neutralizing antibodies following three exposures. The anti-BAY 86-6150 antibodies cross-reacted with and neutralized wild-type FVIIa (WT-FVIIa). Post hoc epitope mapping using peripheral blood mononuclear cells from the responding patient found that none of the 14 peptides unique to BAY 86-6150 were recognized by the patient's T cells, but strong responses were detected against 2 WT-FVIIa peptides. In the single patient with haemophilia A who developed anti-BAY 86-6150 antibodies, results of T-cell epitope mapping indicated BAY 86-6150 was no more immunogenic than WT-FVIIa. © 2016 The Authors. Haemophilia Published by John Wiley & Sons Ltd.

Map showing thickness of young bay mud, southern San Francisco Bay, California

USGS Publications Warehouse

McDonald, Sandra D.; Nichols, Donald R.; Wright, Nancy A.; Atwater, Brian

1978-01-01

Soft water-saturated estuarine deposits less than 10,000 years old underlie the southern part of San Francisco bay and the present and former marshlands that border the bay. Known locally as bay mud or as young bay mud, these deposits, and the estuarine environment that produces them, are of major importance in making decision on land use and development in the San Francisco Bay area. Knowledge of the distribution, thickness, and physical properties of young bay mud is critical to the feasibility, design, and maintenance of structures built on it. Fore this reason, numerous attempts have been made in the past to map or describe these characteristics (Mitchell, 1963; Goldman, 1969; McDonald and Nichols, 1974). The accompanying map of bay-mud thickness significantly revises part of an earlier compilation by Kahle and Goldman (1969) and includes new data from approximately 2400 boreholes, most of which have been drilled during the past 15 years. It also incorporates information on historic margins of San Francisco Bay and its tidal marshes (Nichols and Wright, 1971). Although this map was compelled mostly from data gathered during foundation investigations and construction projects, it is mostly from data gathered during foundation investigations and construction projects, it is not a substitute for such studies. Rather, the map provides regional information for land-use planning, seismic zonation, and design of foundation investigations.

77 FR 14276 - Regulated Navigation Area; Little Bay Bridge Construction, Little Bay, Portsmouth, NH

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-09

...-AA11 Regulated Navigation Area; Little Bay Bridge Construction, Little Bay, Portsmouth, NH AGENCY... under and surrounding the Little Bay and General Sullivan Bridges in order to facilitate construction of the Little Bay Bridge between Newington, NH and Dover, NH. This temporary interim rule is necessary to...

Transport of Riverine Material From Multiple Rivers in the Chesapeake Bay: Important Control of Estuarine Circulation on the Material Distribution

NASA Astrophysics Data System (ADS)

Du, Jiabi; Shen, Jian

2017-11-01

Driven by estuarine circulation, material released from lower Chesapeake Bay tributaries has the potential to be transported to the upper Bay. How far and what fraction of the material from tributaries can be carried to the upper estuary have not been quantitatively investigated. For an estuary system with multiple tributaries, the relative contribution from each tributary can provide valuable information for source assessment and fate prediction for riverine materials and passive moving organisms. We conducted long-term numerical simulations using multiple passive tracers that are independently released in the headwater of five main rivers (i.e., Susquehanna, Potomac, Rappahannock, York, and James Rivers) and calculated the relative contribution of each river to the total material in the mainstem. The results show that discharge from Susquehanna River exerts the dominant control on the riverine material throughout the entire mainstem. Despite the smaller contribution from the lower-middle Bay tributaries to the total materials in the mainstem, materials released from these rivers have a high potential to be transported to the middle-upper Bay through the bottom inflow by the persistent estuarine circulation. The fraction of the tributary material transported to the upper Bay depends on the location of the tributary. Materials released near the mouth are subject to a rapid flushing process, small retention time, and strong shelf current. Our results reveal three distinct spatial patterns for materials released from the main river, tributary, and coastal oceans. This study highlights the important control of estuarine circulation over horizontal and vertical distributions of materials in the mainstem.

78 FR 38580 - Special Local Regulation; Tall Ships Celebration Bay City, Bay City, MI

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-27

...-AA08 Special Local Regulation; Tall Ships Celebration Bay City, Bay City, MI AGENCY: Coast Guard, DHS... regulatory act for the celebration specific to Bay City, MI, the Coast Guard recently published a separate... various events throughout the Great Lakes this summer, to include the Tall Ships Celebration Bay City...

Bed composition generation for morphodynamic modeling: Case study of San Pablo Bay in California, USA

USGS Publications Warehouse

van der Wegen, M.; Dastgheib, A.; Jaffe, B.E.; Roelvink, D.

2011-01-01

Applications of process-based morphodynamic models are often constrained by limited availability of data on bed composition, which may have a considerable impact on the modeled morphodynamic development. One may even distinguish a period of "morphodynamic spin-up" in which the model generates the bed level according to some ill-defined initial bed composition rather than describing the realistic behavior of the system. The present paper proposes a methodology to generate bed composition of multiple sand and/or mud fractions that can act as the initial condition for the process-based numerical model Delft3D. The bed composition generation (BCG) run does not include bed level changes, but does permit the redistribution of multiple sediment fractions over the modeled domain. The model applies the concept of an active layer that may differ in sediment composition above an underlayer with fixed composition. In the case of a BCG run, the bed level is kept constant, whereas the bed composition can change. The approach is applied to San Pablo Bay in California, USA. Model results show that the BCG run reallocates sand and mud fractions over the model domain. Initially, a major sediment reallocation takes place, but development rates decrease in the longer term. Runs that take the outcome of a BCG run as a starting point lead to more gradual morphodynamic development. Sensitivity analysis shows the impact of variations in the morphological factor, the active layer thickness, and wind waves. An important but difficult to characterize criterion for a successful application of a BCG run is that it should not lead to a bed composition that fixes the bed so that it dominates the "natural" morphodynamic development of the system. Future research will focus on a decadal morphodynamic hindcast and comparison with measured bathymetries in San Pablo Bay so that the proposed methodology can be tested and optimized. ?? 2010 The Author(s).

Fate of corrosion products released from stainless steel in marine sediments and seawater. Part 2. Sequim Bay clayey silt

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmidt, R.L.

1982-04-01

This report describes laboratory experiments in which neutron-activated 347 stainless steel specimens were exposed to clayey silt from Sequim Bay, Washington. The properties and trace metal geochemistry of the sediment and the amounts of corrosion products that were released under oxic and reduced conditions and their distribution among different chemical fractions of the sediment are discussed. The distributions of Cr, Mn, Fe, Ni and Cu among different chemical forms in the Sequim Bay sediment show that DTPA removed <10% of extractable Cr, Fe and Mn, approx. 20% of extractable Ni and approx. 30% of extractable Cu. The inorganic fraction (materialmore » soluble in 2.5% acetic acid) accounted for approx. 30% of total extractable Mn and approx. 10% or less of Cr, Fe, Ni and Cu. Major portions of Cr and Cu, and a large amount of Fe were in the organic fraction. Extractable Mn, Fe and Ni were associated with hydrous oxides likely as coatings on the mineral substrate of the sediment. No Co was detectable in any of the extracts. (PSB)« less

James Bay

Atmospheric Science Data Center

2013-04-17

article title:  Hudson Bay and James Bay, Canada   ... which scatters more light in the backward direction. This example illustrates how multi-angle viewing can distinguish physical structures ... MD. The MISR data were obtained from the NASA Langley Research Center Atmospheric Science Data Center in Hampton, VA. Image ...

Mid-Bay Islands Hydrodynamics and Sedimentation Modeling Study, Chesapeake Bay

DTIC Science & Technology

2006-08-01

largest estuary in the United States, extending more than 150 miles from its seaward end at the Atlantic Ocean to the bayward end at the entrance to...water enters the bay from more than 150 major rivers and streams at approximately 80,000 cu ft/sec. Ocean tides enter the bay through the Atlantic ...Ocean entrance and C&D Canal. The mean range of tides in the bay varies from approximately 1 ft on the western shore to 3 ft at the Atlantic Ocean

Influence of net freshwater supply on salinity in Florida Bay

USGS Publications Warehouse

Nuttle, William K.; Fourqurean, James W.; Cosby, Bernard J.; Zieman, Joseph C.; Robblee, Michael B.

2000-01-01

An annual water budget for Florida Bay, the large, seasonally hypersaline estuary in the Everglades National Park, was constructed using physically based models and long‐term (31 years) data on salinity, hydrology, and climate. Effects of seasonal and interannual variations of the net freshwater supply (runoff plus rainfall minus evaporation) on salinity variation within the bay were also examined. Particular attention was paid to the effects of runoff, which are the focus of ambitious plans to restore and conserve the Florida Bay ecosystem. From 1965 to 1995 the annual runoff from the Everglades into the bay was less than one tenth of the annual direct rainfall onto the bay, while estimated annual evaporation slightly exceeded annual rainfall. The average net freshwater supply to the bay over a year was thus approximately zero, and interannual variations in salinity appeared to be affected primarily by interannual fluctuations in rainfall. At the annual scale, runoff apparently had little effect on the bay as a whole during this period. On a seasonal basis, variations in rainfall, evaporation, and runoff were not in phase, and the net freshwater supply to the bay varied between positive and negative values, contributing to a strong seasonal pattern in salinity, especially in regions of the bay relatively isolated from exchanges with the Gulf of Mexico and Atlantic Ocean. Changes in runoff could have a greater effect on salinity in the bay if the seasonal patterns of rainfall and evaporation and the timing of the runoff are considered. One model was also used to simulate spatial and temporal patterns of salinity responses expected to result from changes in net freshwater supply. Simulations in which runoff was increased by a factor of 2 (but with no change in spatial pattern) indicated that increased runoff will lower salinity values in eastern Florida Bay, increase the variability of salinity in the South Region, but have little effect on salinity in the Central

Patterns of alien plant invasion across coastal bay areas in southern China

Treesearch

Hai Ren; Qinfeng Guo; Hong Liu; Jing Li; Qianmei Zhang; Hualin Xu; Fanghong Xu

2014-01-01

An understanding of the ways in which levels of invasions by alien species are correlated with environmental factors is helpful to manage the negative impacts of these invasive species. Two tropical coastal areas in South China, Shenzhen Bay and Leizhou Bay, are national nature reserves, but they are threatened by invasive plants. Here, we investigated the level of...

76 FR 38020 - Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-29

...-AA00 Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH AGENCY: Coast Guard, DHS... from portions of Lake Erie for the Bay Point Fireworks. This temporary safety zone is necessary to protect spectators and vessels from the hazards associated with fireworks displays. DATES: This regulation...

78 FR 30765 - Safety Zone; Bay Village Independence Day Fireworks, Lake Erie, Bay Village, OH

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-23

...-AA00 Safety Zone; Bay Village Independence Day Fireworks, Lake Erie, Bay Village, OH AGENCY: Coast... zone on Lake Erie, Bay Village, OH. This safety zone is intended to restrict vessels from a portion of Lake Erie during the Bay Village Independence Day Fireworks display. This temporary safety zone is...

77 FR 39420 - Safety Zone; Bay Village Independence Day Fireworks, Lake Erie, Bay Village, OH

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-03

...-AA00 Safety Zone; Bay Village Independence Day Fireworks, Lake Erie, Bay Village, OH AGENCY: Coast... zone on Lake Erie, Bay Village, OH. This safety zone is intended to restrict vessels from a portion of Lake Erie during the Bay Village Independence Day Fireworks display. This temporary safety zone is...

75 FR 54771 - Safety Zone; Thunder on the Bay, Chesapeake Bay, Buckroe Beach Park, Hampton, VA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-09

...-AA00 Safety Zone; Thunder on the Bay, Chesapeake Bay, Buckroe Beach Park, Hampton, VA AGENCY: Coast... safety zone on the navigable waters of Chesapeake Bay in Hampton, VA in support of the Thunder on the Bay.... 0 2. Add Sec. 165.T05-0755 to read as follows: Sec. 165.T05-0755 Safety Zone; Thunder on the Bay...

Spatial distribution of heavy metals in surficial sediments from Guanabara Bay: Rio de Janeiro, Brazil

NASA Astrophysics Data System (ADS)

Neto, José Antônio Baptista; Gingele, Franz Xaver; Leipe, Thomas; Brehme, Isa

2006-04-01

Ninety-two surface sediment samples were collected in Guanabara Bay, one of the most prominent urban bays in SE Brazil, to investigate the spatial distribution of anthropogenic pollutants. The concentrations of heavy metals, organic carbon and particle size were examined in all samples. Large spatial variations of heavy metals and particle size were observed. The highest concentrations of heavy metals were found in the muddy sediments from the north western region of the bay near the main outlets of the most polluted rivers, municipal waste drainage systems and one of the major oil refineries. Another anomalous concentration of metals was found adjacent to Rio de Janeiro Harbour. The heavy metal concentrations decrease to the northeast, due to intact rivers and the mangrove systems in this area, and to the south where the sand fraction and open-marine processes dominate. The geochemical normalization of metal data to Li or Al has also demonstrated that the anthropogenic input of heavy metals have altered the natural sediment heavy metal distribution.

Bayes factor and posterior probability: Complementary statistical evidence to p-value.

PubMed

Lin, Ruitao; Yin, Guosheng

2015-09-01

As a convention, a p-value is often computed in hypothesis testing and compared with the nominal level of 0.05 to determine whether to reject the null hypothesis. Although the smaller the p-value, the more significant the statistical test, it is difficult to perceive the p-value in a probability scale and quantify it as the strength of the data against the null hypothesis. In contrast, the Bayesian posterior probability of the null hypothesis has an explicit interpretation of how strong the data support the null. We make a comparison of the p-value and the posterior probability by considering a recent clinical trial. The results show that even when we reject the null hypothesis, there is still a substantial probability (around 20%) that the null is true. Not only should we examine whether the data would have rarely occurred under the null hypothesis, but we also need to know whether the data would be rare under the alternative. As a result, the p-value only provides one side of the information, for which the Bayes factor and posterior probability may offer complementary evidence. Copyright © 2015 Elsevier Inc. All rights reserved.

77 FR 44140 - Drawbridge Operation Regulation; Sturgeon Bay Ship Canal, Sturgeon Bay, WI

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-27

... Maple-Oregon Bridges so vehicular traffic congestion would not develop on downtown Sturgeon Bay streets... movement of vehicular traffic in Sturgeon Bay. The Sturgeon Bay Ship Canal is approximately 8.6 miles long... significant increase in vehicular and vessel traffic during the peak tourist and navigation season between...

75 FR 8297 - Tongass National Forest, Thorne Bay Ranger District, Thorne Bay, AK

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-24

..., Thorne Bay, AK AGENCY: Forest Service, USDA. ACTION: Cancellation of Notice of intent to prepare an... Roberts, Zone Planner, Thorne Bay Ranger District, Tongass National Forest, P.O. Box 19001, Thorne Bay, AK 99919, telephone: 907-828-3250. SUPPLEMENTARY INFORMATION: The 47,007-acre Kosciusko Project Area is...

Phytoplankton composition and microcystin concentrations in open and closed bays of Lake Victoria, Tanzania

PubMed Central

Mbonde, Athanasio S.; Sitoki, Lewis; Kurmayer, Rainer

2017-01-01

This study was carried out in order to investigate the spatial variation of algal toxin (microcystin) concentrations along the shoreline of Lake Victoria. A total of 16 nearshore stations differing in connectivity to the main lake basin were categorized as either closed bays (ratio of bay area to bay opening < 1) or open bays (ratio ≥ 1) and sampled during November and December 2009. Water samples were analyzed for total phosphorus (TP), chlorophyll a, phytoplankton community composition and concentrations of microcystin (MC). Open and closed bays were significantly different for phytoplankton abundance and composition: Average phytoplankton biovolume was higher for closed bays (45 mm3 L-1 ± 11 SE) than open bays (5 ± 2 mm3 L-1). Cyanobacterial biovolume (mainly Microcystis spp., Anabaena spp. and Planktolyngbya spp.) also was significantly higher in closed bays (82 ± 9% of total biovolume) than in open bays (44 ± 5%). In contrast, diatom biovolume was lower in closed bays (7 ± 1%) than in open bays (36 ± 6%). MCs were found only among sites from closed bays and concentrations ranged from 0.4 to 13 μg L-1 MC-LR equiv. and coincided with high abundance of Microcystis spp. It is concluded that the level of water exchange from individual bays to the main basin is an important factor influencing eutrophication and microcystin production in nearshore habitats of Lake Victoria. PMID:28077928

RNA sequencing supports distinct reactive oxygen species-mediated pathways of apoptosis by high and low size mass fractions of Bay leaf (Lauris nobilis) in HT-29 cells.

PubMed

Rodd, Annabelle L; Ververis, Katherine; Sayakkarage, Dheeshana; Khan, Abdul W; Rafehi, Haloom; Ziemann, Mark; Loveridge, Shanon J; Lazarus, Ross; Kerr, Caroline; Lockett, Trevor; El-Osta, Assam; Karagiannis, Tom C; Bennett, Louise E

2015-08-01

Anti-proliferative and pro-apoptotic effects of Bay leaf (Laurus nobilis) in mammalian cancer and HT-29 adenocarcinoma cells have been previously attributed to effects of polyphenolic and essential oil chemical species. Recently, we demonstrated differentiated growth-regulating effects of high (HFBL) versus low molecular mass (LFBL) aqueous fractions of bay leaf and now confirm by comparative effects on gene expression, that HFBL and LFBL suppress HT-29 growth by distinct mechanisms. Induction of intra-cellular lesions including DNA strand breakage by extra-cellular HFBL, invoked the hypothesis that iron-mediated reactive oxygen species with capacity to penetrate cell membrane, were responsible for HFBL-mediated effects, supported by equivalent effects of HFBL in combination with γ radiation. Activities of HFBL and LFBL were interpreted to reflect differentiated responses to iron-mediated reactive oxygen species (ROS), occurring either outside or inside cells. In the presence of LFBL, apoptotic death was relatively delayed compared with HFBL. ROS production by LFBL mediated p53-dependent apoptosis and recovery was suppressed by promoting G1/S phase arrest and failure of cellular tight junctions. In comparison, intra-cellular anti-oxidant protection exerted by LFBL was absent for extra-cellular HFBL (likely polysaccharide-rich), which potentiated more rapid apoptosis by producing DNA double strand breaks. Differentiated effects on expression of genes regulating ROS defense and chromatic condensation by LFBL versus HFBL, were observed. The results support ferrous iron in cell culture systems and potentially in vivo, can invoke different extra-cellular versus intra-cellular ROS-mediated chemistries, that may be regulated by exogenous, including dietary species.

Methodical Features of the Field Researches of the Anapa Bay-Bar Sediment Composition

NASA Astrophysics Data System (ADS)

Krylenko, Marina; Krylenko, Viacheslav; Gusakova, Anastasiya; Kosyan, Alisa

2014-05-01

Resort Anapa (Black Sea coast, Russia) holds leading positions in the Russian market of sanatorium-resort and children's recreation. The 50-200 m sandy beaches of Anapa bay-bar are the main value of the resort. Anapa bay-bar is an extensive accumulative sandy body having the length about 47 km. Obvious attributes of the beaches degradation demanding immediate measures on their protection and restoration are observed in last years. The main reason of degradation is beach material deficiency. To organize researches of the sediments of this extensive natural object is a difficult challenge. It is necessary to reduce number of tests to minimum. It is important to record differences of separate bay-bar sites and to receive comparable data for different seasons and years. Our researches showed that the grain-size sediment composition significantly depends of position on local relief. Consequently, researching of the alongshore change of the sediment size is effectual to realize at this morphological elements. Shelly detritus makes to 30% of total amount of beach sediments. It is necessary to consider that quantitative shell distribution along the coast significantly depends on a configuration of the coastline and an underwater relief. Quantity of the shells for cross-shore profile is maximal near coastline. For identification of the sediment sources and researching of their fluxes to use minerals markers (heavy minerals) is optimum. The maximum of heavy minerals concentration is characteristic for fraction 0.1-0.05mm at depth more 5 m. The maintenance of this fraction within other morphological zones isn't enough for the analysis or is excessively changeable. Use of the revealed features allowed to conduct the representative field researches of grain-size and mineral sediment composition for all morphological zones of underwater and coast part of the Anapa bay-bar. This methodic recommendations are workable for researches on others coast accumulative body. The work is

Physical processes in a coupled bay-estuary coastal system: Whitsand Bay and Plymouth Sound

NASA Astrophysics Data System (ADS)

Uncles, R. J.; Stephens, J. A.; Harris, C.

2015-09-01

Whitsand Bay and Plymouth Sound are located in the southwest of England. The Bay and Sound are separated by the ∼2-3 km-wide Rame Peninsula and connected by ∼10-20 m-deep English Channel waters. Results are presented from measurements of waves and currents, drogue tracking, surveys of salinity, temperature and turbidity during stratified and unstratified conditions, and bed sediment surveys. 2D and 3D hydrodynamic models are used to explore the generation of tidally- and wind-driven residual currents, flow separation and the formation of the Rame eddy, and the coupling between the Bay and the Sound. Tidal currents flow around the Rame Peninsula from the Sound to the Bay between approximately 3 h before to 2 h after low water and form a transport path between them that conveys lower salinity, higher turbidity waters from the Sound to the Bay. These waters are then transported into the Bay as part of the Bay-mouth limb of the Rame eddy and subsequently conveyed to the near-shore, east-going limb and re-circulated back towards Rame Head. The Simpson-Hunter stratification parameter indicates that much of the Sound and Bay are likely to stratify thermally during summer months. Temperature stratification in both is pronounced during summer and is largely determined by coastal, deeper-water stratification offshore. Small tidal stresses in the Bay are unable to move bed sediment of the observed sizes. However, the Bay and Sound are subjected to large waves that are capable of driving a substantial bed-load sediment transport. Measurements show relatively low levels of turbidity, but these respond rapidly to, and have a strong correlation with, wave height.

Circulation in a bay influenced by flooding of a river discharging outside the bay

NASA Astrophysics Data System (ADS)

Kakehi, Shigeho; Takagi, Takamasa; Okabe, Katsuaki; Takayanagi, Kazufumi

2017-03-01

To investigate the influence of a river discharging outside a bay on circulation in the bay, we carried out current and salinity measurements from mooring systems and hydrographic observations in Matsushima Bay, Japan, and off the Naruse River, which discharges outside the bay. Previously, enhancement of horizontal circulation in the bay induced by increased freshwater input from the Naruse River was reported to have degraded the seedling yield of wild Pacific oysters in the bay, but the freshwater inflow from the river was not directly measured. Our hydrographic observations in Katsugigaura Strait, approximately 3 km southwest of the Naruse River mouth, detected freshwater derived from the river. The mooring data revealed that freshwater discharged by the river flowed into Matsushima Bay via the strait and that the freshwater transport increased when the river was in flood. The inflow through straits other than Katsugigaura was estimated by a box model analysis to be 26-145 m3 s-1 under normal river discharge conditions, and it decreased to 6 m3 s-1 during flood conditions. During flood events, the salt and water budgets in the bay were maintained by the horizontal circulation: inflow occurred mainly via Katsugigaura Strait, and outflow was mainly via other straits.

[Application of Bayes Probability Model in Differentiation of Yin and Yang Jaundice Syndromes in Neonates].

PubMed

Mu, Chun-sun; Zhang, Ping; Kong, Chun-yan; Li, Yang-ning

2015-09-01

To study the application of Bayes probability model in differentiating yin and yang jaundice syndromes in neonates. Totally 107 jaundice neonates who admitted to hospital within 10 days after birth were assigned to two groups according to syndrome differentiation, 68 in the yang jaundice syndrome group and 39 in the yin jaundice syndrome group. Data collected for neonates were factors related to jaundice before, during and after birth. Blood routines, liver and renal functions, and myocardial enzymes were tested on the admission day or the next day. Logistic regression model and Bayes discriminating analysis were used to screen factors important for yin and yang jaundice syndrome differentiation. Finally, Bayes probability model for yin and yang jaundice syndromes was established and assessed. Factors important for yin and yang jaundice syndrome differentiation screened by Logistic regression model and Bayes discriminating analysis included mothers' age, mother with gestational diabetes mellitus (GDM), gestational age, asphyxia, or ABO hemolytic diseases, red blood cell distribution width (RDW-SD), platelet-large cell ratio (P-LCR), serum direct bilirubin (DBIL), alkaline phosphatase (ALP), cholinesterase (CHE). Bayes discriminating analysis was performed by SPSS to obtain Bayes discriminant function coefficient. Bayes discriminant function was established according to discriminant function coefficients. Yang jaundice syndrome: y1= -21. 701 +2. 589 x mother's age + 1. 037 x GDM-17. 175 x asphyxia + 13. 876 x gestational age + 6. 303 x ABO hemolytic disease + 2.116 x RDW-SD + 0. 831 x DBIL + 0. 012 x ALP + 1. 697 x LCR + 0. 001 x CHE; Yin jaundice syndrome: y2= -33. 511 + 2.991 x mother's age + 3.960 x GDM-12. 877 x asphyxia + 11. 848 x gestational age + 1. 820 x ABO hemolytic disease +2. 231 x RDW-SD +0. 999 x DBIL +0. 023 x ALP +1. 916 x LCR +0. 002 x CHE. Bayes discriminant function was hypothesis tested and got Wilks' λ =0. 393 (P =0. 000). So Bayes

Spatial variation of phytoplankton community structure in Daya Bay, China.

PubMed

Jiang, Zhao-Yu; Wang, You-Shao; Cheng, Hao; Zhang, Jian-Dong; Fei, Jiao

2015-10-01

Daya Bay is one of the largest and most important gulfs in the southern coast of China, in the northern part of the South China Sea. The phylogenetic diversity and spatial distribution of phytoplankton from the Daya Bay surface water and the relationship with the in situ water environment were investigated by the clone library of the large subunit of ribulose-1, 5-bisphosphate carboxylase (rbcL) gene. The dominant species of phytoplankton were diatoms and eustigmatophytes, which accounted for 81.9 % of all the clones of the rbcL genes. Prymnesiophytes were widely spread and wide varieties lived in Daya Bay, whereas the quantity was limited. The community structure of phytoplankton was shaped by pH and salinity and the concentration of silicate, phosphorus and nitrite. The phytoplankton biomass was significantly positively affected by phosphorus and nitrite but negatively by salinity and pH. Therefore, the phytoplankton distribution and biomass from Daya Bay were doubly affected by anthropic activities and natural factors.

Avoiding overstating the strength of forensic evidence: Shrunk likelihood ratios/Bayes factors.

PubMed

Morrison, Geoffrey Stewart; Poh, Norman

2018-05-01

When strength of forensic evidence is quantified using sample data and statistical models, a concern may be raised as to whether the output of a model overestimates the strength of evidence. This is particularly the case when the amount of sample data is small, and hence sampling variability is high. This concern is related to concern about precision. This paper describes, explores, and tests three procedures which shrink the value of the likelihood ratio or Bayes factor toward the neutral value of one. The procedures are: (1) a Bayesian procedure with uninformative priors, (2) use of empirical lower and upper bounds (ELUB), and (3) a novel form of regularized logistic regression. As a benchmark, they are compared with linear discriminant analysis, and in some instances with non-regularized logistic regression. The behaviours of the procedures are explored using Monte Carlo simulated data, and tested on real data from comparisons of voice recordings, face images, and glass fragments. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

Effects of oceanographic factors on spatial distribution of Whale Shark in Cendrawasih Bay National Park, West Papua

NASA Astrophysics Data System (ADS)

Ranintyari, Maulida; Sunarto; Syamsuddin, Mega L.; Astuty, Sri

2018-05-01

Whale sharks are a leading species in Cendrawasih Bay due to its benign nature and its regular appearance. Recently, whale sharks are vulnerable to scarcity and even extinction. One of the efforts to maintain the existence of the whale shark population is by knowing its spatial distribution. This study aims to analyze how the oceanographic factors affect the spatial distribution of whale sharks in Cendrawasih Bay National Park. The method used in this research is descriptive with the quantitative approach using the Generalized Additive Model (GAM) analysis. The data consisted of the whale shark monitoring data in TNTC taken by WWF-Indonesia, and image data of sea surface temperature (SST) and chlorophyll-a concentration of Aqua-MODIS, and also sea surface current from Aviso. Analyses were conducted for the period of January 2012 until March 2015. The GAM result indicated that sea surface current was better than the other environment (SST and chlorophyll-a concentration) as an oceanographic predictor of whale shark appearance. High probabilities of the whale shark’s to appear on the surface were observed in sea surface current velocities between 0.30-0.60 m/s, for SST ranged from 30.50-31.80 °C, and for chlorophyll-a concentration ranged from 0.20-0.40 mg/m3.

Tidal and residual circulation in a semi-arid bay: Coquimbo Bay, Chile

NASA Astrophysics Data System (ADS)

Valle-Levinson, Arnoldo; Moraga, Julio; Olivares, Jorge; Blanco, José Luis

2000-11-01

Velocity profiles and time-series data were combined with conductivity-temperature-depth (CTD) casts to describe the general circulation at tidal and subtidal scales in a bay of semi-arid climate, Coquimbo Bay (˜30°S), Chile. This was the first study that used a towed acoustic Doppler current profiler (ADCP) in coastal Chilean waters and is one of the very few in semi-arid bays. The ADCP was towed for two semi-diurnal tidal cycles in early austral autumn, between March 23 and 24, 1997 along a triangular trajectory that covered most of the bay. Additional data consisted of moored current meters and CTD casts. The observations indicated the presence of a surface layer, above the pycnocline, that showed predominantly diurnal variability forced by the breeze regime and by tides. The tidal circulation in the surface layer featured amplitudes of 10 cm/s within an anticyclonic gyre that occupied most of the bay. The subtidal circulation in the surface was characterized by a pair of counter-rotating gyres. The northernmost three-fourths of the bay showed an anticyclonic gyre, and the observations over the southern fourth implied a cyclonic gyre. The subtidal anticyclonic gyre had a counterpart rotating in opposite direction within a lower layer, underneath the pycnocline. The lower layer showed semidiurnal variability in addition to diurnal variability and was insulated by the pycnocline from heat and momentum fluxes through the air-water interface. Circulations that resemble estuarine and anti-estuarine patterns were found associated with the subtidal gyres. A horizontal divergence related to a 10 cm/s near-surface outflow around Point Tortuga, to the south of the bay entrance, allowed the development of upward motion off the Point, as evidenced by the tilt of the isopycnals at the entrance to the bay.

Long-term results and prognostic factors of fractionated strontium-90 eye applicator for pterygium.

PubMed

Viani, Gustavo Arruda; Stefano, Eduardo Jose; De Fendi, Ligia Issa; Fonseca, Ellen Carrara

2008-11-15

To evaluate the long-term safety, effectiveness, and prognostic factors of fractionated postoperative beta-irradiation. Between 1993 and 2005, 623 patients with 737 pterygium lesions were treated with a strontium-90 eye applicator after surgical excision. The median follow-up period was 60 months (range, 6.7-139.5). Of the 737 lesions, 644 were primary and 93 were recurrences after surgical removal alone. Fractionated radiotherapy (RT) to a total dose of 35 Gy in five to seven fractions was used. A total of 73 local pterygium recurrences (9.9%) were noted. Of the recurrent cases, 80% were noted within 3 years after treatment. The 5- and 10-year probability of local control was 90% and 88%, respectively. The multivariate analysis for all cases demonstrated that gender, age, total radiation dose, recurrent pterygia, and interval between surgery and RT affected the overall local control rate. Late toxicities that might have been associated with strontium-90 RT included scleromalacia (scleral thinning) in nine eyes, adhesion of the eyelids in eight, cataracts in six, and scleral ulcer in five eyes. Fractionated strontium-90 RT to a total dose of approximately 35 Gy in five to seven fractions results in a similar local control rate as higher doses in other series, with an acceptable complication rate.

Fractionally charged skyrmions in fractional quantum Hall effect

DOE PAGES

Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; ...

2015-11-26

The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeemanmore » energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.« less

Fractionally charged skyrmions in fractional quantum Hall effect

PubMed Central

Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

2015-01-01

The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region. PMID:26608906

Structuring of Bacterioplankton Diversity in a Large Tropical Bay

PubMed Central

Gregoracci, Gustavo B.; Nascimento, Juliana R.; Cabral, Anderson S.; Paranhos, Rodolfo; Valentin, Jean L.; Thompson, Cristiane C.; Thompson, Fabiano L.

2012-01-01

Structuring of bacterioplanktonic populations and factors that determine the structuring of specific niche partitions have been demonstrated only for a limited number of colder water environments. In order to better understand the physical chemical and biological parameters that may influence bacterioplankton diversity and abundance, we examined their productivity, abundance and diversity in the second largest Brazilian tropical bay (Guanabara Bay, GB), as well as seawater physical chemical and biological parameters of GB. The inner bay location with higher nutrient input favored higher microbial (including vibrio) growth. Metagenomic analysis revealed a predominance of Gammaproteobacteria in this location, while GB locations with lower nutrient concentration favored Alphaproteobacteria and Flavobacteria. According to the subsystems (SEED) functional analysis, GB has a distinctive metabolic signature, comprising a higher number of sequences in the metabolism of phosphorus and aromatic compounds and a lower number of sequences in the photosynthesis subsystem. The apparent phosphorus limitation appears to influence the GB metagenomic signature of the three locations. Phosphorus is also one of the main factors determining changes in the abundance of planktonic vibrios, suggesting that nutrient limitation can be observed at community (metagenomic) and population levels (total prokaryote and vibrio counts). PMID:22363639

Chesapeake Bay TMDL

EPA Pesticide Factsheets

In 2010 EPA established the Chesapeake Bay TMDL, a comprehensive pollution diet with accountability measures to restore clean water in the bay and local waters. It set limits for nutrients and sediment to meet water quality standards across the watershed

77 FR 38488 - Safety Zone; Alexandria Bay Chamber of Commerce, St. Lawrence River, Alexandria Bay, NY

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-28

... 1625-AA00 Safety Zone; Alexandria Bay Chamber of Commerce, St. Lawrence River, Alexandria Bay, NY... temporary safety zone on the St. Lawrence River, Alexandria Bay, New York. This safety zone is intended to restrict vessels from a portion of the St. Lawrence River during the Alexandria Bay Chamber of Commerce...

33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

Code of Federal Regulations, 2011 CFR

2011-07-01

... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters... REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a) The..., Naval Support Activity, Panama City Florida, and such agencies as he/she may designate. [73 FR 52927...

33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

Code of Federal Regulations, 2010 CFR

2010-07-01

... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters... REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a) The..., Naval Support Activity, Panama City Florida, and such agencies as he/she may designate. [73 FR 52927...

Sources of mercury to San Francisco Bay surface sediment as revealed by mercury stable isotopes

USGS Publications Warehouse

Gehrke, Gretchen E.; Blum, Joel D.; Marvin-DePasquale, Mark

2011-01-01

Mercury (Hg) concentrations and isotopic compositions were examined in shallow-water surface sediment (0–2 cm) from San Francisco (SF) Bay to determine the extent to which historic Hg mining contributes to current Hg contamination in SF Bay, and to assess the use of Hg isotopes to trace sources of contamination in estuaries. Inter-tidal and wetland sediment had total Hg (HgT) concentrations ranging from 161 to 1529 ng/g with no simple gradients of spatial variation. In contrast, inter-tidal and wetland sediment displayed a geographic gradient of δ202Hg values, ranging from -0.30% in the southern-most part of SF Bay (draining the New Almaden Hg District) to -0.99% in the northern-most part of SF Bay near the Sacramento–San Joaquin River Delta. Similar to SF Bay inter-tidal sediment, surface sediment from the Alviso Slough channel draining into South SF Bay had a δ202Hg value of -0.29%, while surface sediment from the Cosumnes River and Sacramento–San Joaquin River Delta draining into north SF Bay had lower average δ202Hg values of -0.90% and -0.75%, respectively. This isotopic trend suggests that Hg-contaminated sediment from the New Almaden Hg District mixes with Hg-contaminated sediment from a low δ202Hg source north of SF Bay. Tailings and thermally decomposed ore (calcine) from the New Idria Hg mine in the California Coast Range had average δ202Hg values of -0.37 and +0.03%, respectively, showing that Hg calcination fractionates Hg isotopes resulting in Hg contamination from Hg(II) mine waste products with higher δ202Hg values than metallic Hg(0) produced from Hg mines. Thus, there is evidence for at least two distinct isotopic signals for Hg contamination in SF Bay: Hg associated with calcine waste materials at Hg mines in the Coast Range, such as New Almaden and New Idria; and Hg(0) produced from these mines and used in placer gold mines and/or in other industrial processes in the Sierra Nevada region and SF Bay area.

Tempered fractional calculus

NASA Astrophysics Data System (ADS)

Sabzikar, Farzad; Meerschaert, Mark M.; Chen, Jinghua

2015-07-01

Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered fractional difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series.

Tempered fractional calculus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sabzikar, Farzad, E-mail: sabzika2@stt.msu.edu; Meerschaert, Mark M., E-mail: mcubed@stt.msu.edu; Chen, Jinghua, E-mail: cjhdzdz@163.com

2015-07-15

Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a temperedmore » fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered fractional difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series.« less

Seasonal variations and sources of sedimentary organic carbon in Tokyo Bay.

PubMed

Kubo, Atsushi; Kanda, Jota

2017-01-30

Total organic carbon (TOC), total nitrogen (TN) contents, their stable C and N isotope ratio (δ 13 C and δ 15 N), and chlorophyll a ([Chl a] sed ) of surface sediments were investigated monthly to identify the seasonal variations and sources of organic matter in Tokyo Bay. The sedimentary TOC (TOC sed ) and TN (TN sed ) contents, and the sedimentary δ 13 C and δ 15 N (δ 13 C sed and δ 15 N sed ) values were higher in summer than other seasons. The seasonal variations were controlled by high primary production in the water column and hypoxic water in the bottom water during summer. The fraction of terrestrial and marine derived organic matter was estimated by Bayesian mixing model using stable isotope data and TOC/TN ratio. Surface sediments in Tokyo Bay are dominated by marine derived organic matter, which accounts for about 69±5% of TOC sed . Copyright © 2016 Elsevier Ltd. All rights reserved.

Detection of dechallenge in spontaneous reporting systems: a comparison of Bayes methods.

PubMed

Banu, A Bazila; Alias Balamurugan, S Appavu; Thirumalaikolundusubramanian, Ponniah

2014-01-01

Dechallenge is a response observed for the reduction or disappearance of adverse drug reactions (ADR) on withdrawal of a drug from a patient. Currently available algorithms to detect dechallenge have limitations. Hence, there is a need to compare available new methods. To detect dechallenge in Spontaneous Reporting Systems, data-mining algorithms like Naive Bayes and Improved Naive Bayes were applied for comparing the performance of the algorithms in terms of accuracy and error. Analyzing the factors of dechallenge like outcome and disease category will help medical practitioners and pharmaceutical industries to determine the reasons for dechallenge in order to take essential steps toward drug safety. Adverse drug reactions of the year 2011 and 2012 were downloaded from the United States Food and Drug Administration's database. The outcome of classification algorithms showed that Improved Naive Bayes algorithm outperformed Naive Bayes with accuracy of 90.11% and error of 9.8% in detecting the dechallenge. Detecting dechallenge for unknown samples are essential for proper prescription. To overcome the issues exposed by Naive Bayes algorithm, Improved Naive Bayes algorithm can be used to detect dechallenge in terms of higher accuracy and minimal error.

33 CFR 110.224 - San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin...

Code of Federal Regulations, 2014 CFR

2014-07-01

... Bay, Sacramento River, San Joaquin River, and connecting waters, CA. (a) General regulations. (1..., Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River, and connecting waters, CA. 110.224... notified to move by the Captain of the Port. (4) No vessel may anchor within a tunnel, cable, or pipeline...

33 CFR 110.224 - San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin...

Code of Federal Regulations, 2013 CFR

2013-07-01

... Bay, Sacramento River, San Joaquin River, and connecting waters, CA. (a) General regulations. (1..., Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River, and connecting waters, CA. 110.224... notified to move by the Captain of the Port. (4) No vessel may anchor within a tunnel, cable, or pipeline...

33 CFR 110.224 - San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin...

Code of Federal Regulations, 2012 CFR

2012-07-01

... Bay, Sacramento River, San Joaquin River, and connecting waters, CA. (a) General regulations. (1..., Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River, and connecting waters, CA. 110.224... notified to move by the Captain of the Port. (4) No vessel may anchor within a tunnel, cable, or pipeline...

Seasonal/Yearly Salinity Variations in San Francisco Bay

USGS Publications Warehouse

Peterson, David H.; Cayan, Daniel R.; Dettinger, Michael D.; DiLeo, Jeanne Sandra; Hager, Stephen E.; Knowles, Noah; Nichols, Frederic H.; Schemel, Laurence E.; Smith, Richard E.; Uncles, Reginald J.

1995-01-01

The ability of resource agencies to manage fish, wildlife and freshwater supplies of San Francisco Bay estuary requires an integrated knowledge of the relations between the biota and their physical environment. A key factor in these relations is the role of salinity in determining both the physical and the biological character of the estuary. The saltiness of the water, and particularly its seasonal and interannual patterns of variability, affects which aquatic species live where within the estuary. Salinity also determines where water can and cannot be diverted for human consumption and irrigated agriculture, and plays a role in determining the capacity of the estuary to cleanse itself of wastes. In short, salinity is a fundamental property of estuarine physics and chemistry that, in turn, determines the biological characteristics of each estuary. Freshwater is a major control on estuarine salinity. Most freshwater supplied to the Bay is from river flow through the Delta, which is primarily runoff from the Sierra Nevada. Most contaminants in San Francisco Bay are from the Sacramento/San Joaquin Valley and the local watershed around the Bay rather than the sea or atmosphere. Land is the primary source of freshwater and freshwater serves as a tracer of land-derived substances such as the trace metals (copper, lead and selenium), pesticides and plant nutrients (nitrate and phosphate). The U.S. Geological Survey is collaborating with other agencies and institutions in studying San Francisco Bay salinity using field observations and numerical simulations to define the physical processes that control salinity. The issues that arise from salinity fluctuations, however, differ in the northern and southern parts of the bay. In North Bay we need to know how salinity responds to freshwater flow through the Sacramento/San Joaquin Delta; this knowledge will benefit water managers who determine how much delta flow is needed a) to protect freshwater supplies for municipal water

Bay-Ocean Coupling and the Proximal Fate of Water-Borne Material Exported from San Francisco Bay

NASA Astrophysics Data System (ADS)

Largier, J. L.

2012-12-01

The coupling between San Francisco Bay and the ocean is poorly known: how ocean waters intrude into bay and how bay waters flow out into the ocean. Here we address the outflow from the Bay with a view to describing the proximal fate of water-borne material in the coastal ocean, specifically finer particles and dissolved material. Flow trajectories longer than that in the tidal jet are thus the focus of this study - time scales of hours to days. We present data collected in both winter/runoff and spring/upwelling seasons that reflect the importance of tides and also the importance of wind, which introduces either northward or southward along-coast flow. Southward flow is offshore and typically this Bay effluent is removed from nearshore waters. In contrast, northward flow tends to remain attached to shore, and there is persistent presence of Bay waters in the surface layer up to Point Reyes, only occasionally separated from the coast by local upwelling within Drakes Bay. Perhaps most dramatic is outflow during winter storms, when wind is southerly and pushes water on shore in Drakes Bay as well as inducing an intense flow around Point Reyes, which turns cyclonically to reconnect with the shore in the vicinity of Bodega Bay before forming a wind-accelerated coast-attached current that looks very much like a coastal buoyancy current. This is the time when large volumes of low-salinity and high-load waters are exported from the Bay.

Long-Term Results and Prognostic Factors of Fractionated Strontium-90 Eye Applicator for Pterygium

DOE Office of Scientific and Technical Information (OSTI.GOV)

Arruda Viani, Gustavo; Stefano, Eduardo Jose; Fendi, Ligia Issa de

2008-11-15

Purpose: To evaluate the long-term safety, effectiveness, and prognostic factors of fractionated postoperative {beta}-irradiation. Methods and Materials: Between 1993 and 2005, 623 patients with 737 pterygium lesions were treated with a strontium-90 eye applicator after surgical excision. The median follow-up period was 60 months (range, 6.7-139.5). Of the 737 lesions, 644 were primary and 93 were recurrences after surgical removal alone. Fractionated radiotherapy (RT) to a total dose of 35 Gy in five to seven fractions was used. Results: A total of 73 local pterygium recurrences (9.9%) were noted. Of the recurrent cases, 80% were noted within 3 years aftermore » treatment. The 5- and 10-year probability of local control was 90% and 88%, respectively. The multivariate analysis for all cases demonstrated that gender, age, total radiation dose, recurrent pterygia, and interval between surgery and RT affected the overall local control rate. Late toxicities that might have been associated with strontium-90 RT included scleromalacia (scleral thinning) in nine eyes, adhesion of the eyelids in eight, cataracts in six, and scleral ulcer in five eyes. Conclusion: Fractionated strontium-90 RT to a total dose of approximately 35 Gy in five to seven fractions results in a similar local control rate as higher doses in other series, with an acceptable complication rate.« less

77 FR 50921 - Safety Zone: Bay Bridge Load Transfer Safety Zone, San Francisco Bay, San Francisco, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-23

...-AA00 Safety Zone: Bay Bridge Load Transfer Safety Zone, San Francisco Bay, San Francisco, CA AGENCY... the Bay Bridge Load Transfer Safety Zone from August 1, 2012 through October 31, 2012. This safety... Bay Bridge from the temporary suspension arrangement to the permanent suspension arrangement, the...

TEMPERED FRACTIONAL CALCULUS.

PubMed

Meerschaert, Mark M; Sabzikar, Farzad; Chen, Jinghua

2015-07-15

Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series.

TEMPERED FRACTIONAL CALCULUS

PubMed Central

MEERSCHAERT, MARK M.; SABZIKAR, FARZAD; CHEN, JINGHUA

2014-01-01

Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series. PMID:26085690

33 CFR 167.101 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. 167.101 Section 167.101 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. (a) A precautionary...

33 CFR 167.101 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. 167.101 Section 167.101 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. (a) A precautionary...

33 CFR 167.101 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. 167.101 Section 167.101 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. (a) A precautionary...

33 CFR 167.101 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. 167.101 Section 167.101 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. (a) A precautionary...

Cr isotope fractionation factors for Cr(VI) reduction by a metabolically diverse group of bacteria

NASA Astrophysics Data System (ADS)

Basu, Anirban; Johnson, Thomas M.; Sanford, Robert A.

2014-10-01

Reduction of Cr(VI) is an important process that determines the geochemical behavior, mobility and bioavailability of Cr in both terrestrial and marine environments. Many metabolically diverse microorganisms possess Cr(VI) reduction capacity. Cr(VI) reduction fractionates Cr isotopes and thus 53Cr/52Cr ratios can be used to monitor Cr(VI) reduction and redox conditions. The magnitude of isotopic fractionation (ε) for a variety of microbial reduction mechanisms must be known for accurate interpretation of observed shifts in 53Cr/52Cr ratios. We determined isotopic fractionation factors for Cr(VI) reduction by metal reducers Geobacter sulfurreducens and Shewanella sp. strain NR, a denitrifying soil bacterium Pseudomonas stutzeri DCP-Ps1, and a sulfate reducer Desulfovibrio vulgaris. All bacteria investigated in this study produced significant Cr isotope fractionation. The fractionation (ε) for G. sulfurreducens, Shewanella sp. (NR), P. stutzeri DCP-Ps1, and D. vulgaris were -3.03‰ ± 0.12‰, -2.17‰ ± 0.22‰, -3.14‰ ± 0.13‰, and -3.01‰ ± 0.11‰, respectively. Despite differences in microbial strains in this study, the ε did not vary significantly except for Shewanella sp. (NR). Our results suggest that strong isotopic fractionation is induced during Cr(VI) reduction under electron donor poor (∼300 μM) conditions.

Chesapeake Bay Low Freshwater Inflow Study. Biota Assessment. Phase I. Volume I.

DTIC Science & Technology

1980-08-01

Percentage as Larvae Containing Food Item . . . 70 111-9. Submerged Aquatic Vegetation Found in Maryland and Virginia Waters of the Chesapeake Bay ... .... 74...Composition or the 1977 and 1978 Water - fowl Hunting Kill for Maryland and Virginia. . . . 117 IV-1. Annual Mean Freshwater Inflow to Chesapeake Bay...15C IV-3. Sumary of Water Quality Factors Impacting the Low Freshwater Inflow on Biota .. ............. 163 IV-4. Ranked Relative Importance of

Bay leaves improve glucose and lipid profile of people with type 2 diabetes.

PubMed

Khan, Alam; Zaman, Goher; Anderson, Richard A

2009-01-01

Bay leaves (Laurus nobilis) have been shown to improve insulin function in vitro but the effects on people have not been determined. The objective of this study was to determine if bay leaves may be important in the prevention and/or alleviation of type 2 diabetes. Forty people with type 2 diabetes were divided into 4 groups and given capsules containing 1, 2 or 3 g of ground bay leaves per day for 30 days or a placebo followed by a 10 day washout period. All three levels of bay leaves reduced serum glucose with significant decreases ranging from 21 to 26% after 30 d. Total cholesterol decreased, 20 to 24%, after 30 days with larger decreases in low density lipoprotein (LDL) cholesterol of 32 to 40%. High density lipoprotein (HDL) cholesterol increased 29 and 20% in the groups receiving 1 and 2 g of bay leaves, respectively. Triglycerides also decreased 34 and 25% in groups consuming 1 and 2 g of bay leaves, respectively, after 30 d. There were no significant changes in the placebo group. In summary, this study demonstrates that consumption of bay leaves, 1 to 3 g/d for 30 days, decreases risk factors for diabetes and cardiovascular diseases and suggests that bay leaves may be beneficial for people with type 2 diabetes.

Bay Leaves Improve Glucose and Lipid Profile of People with Type 2 Diabetes

PubMed Central

Khan, Alam; Zaman, Goher; Anderson, Richard A.

2009-01-01

Bay leaves (Laurus nobilis) have been shown to improve insulin function in vitro but the effects on people have not been determined. The objective of this study was to determine if bay leaves may be important in the prevention and/or alleviation of type 2 diabetes. Forty people with type 2 diabetes were divided into 4 groups and given capsules containing 1, 2 or 3 g of ground bay leaves per day for 30 days or a placebo followed by a 10 day washout period. All three levels of bay leaves reduced serum glucose with significant decreases ranging from 21 to 26% after 30 d. Total cholesterol decreased, 20 to 24%, after 30 days with larger decreases in low density lipoprotein (LDL) cholesterol of 32 to 40%. High density lipoprotein (HDL) cholesterol increased 29 and 20% in the groups receiving 1 and 2 g of bay leaves, respectively. Triglycerides also decreased 34 and 25% in groups consuming 1 and 2 g of bay leaves, respectively, after 30 d. There were no significant changes in the placebo group. In summary, this study demonstrates that consumption of bay leaves, 1 to 3 g/d for 30 days, decreases risk factors for diabetes and cardiovascular diseases and suggests that bay leaves may be beneficial for people with type 2 diabetes. PMID:19177188

Discharge, water-quality characteristics, and nutrient loads from McKay Bay, Delaney Creek, and East Bay, Tampa, Florida, 1991-1993

USGS Publications Warehouse

Stoker, Y.E.; Levesque, V.A.; Fritz, E.M.

1996-01-01

Nutrient enrichment in Tampa Bay has caused a decline in water quality in the estuary. Efforts to reduce the nutrient loading to Tampa Bay have resulted in improvement in water quality from 1981 to 1991. However, Tampa Bay still is onsidered enriched with nutrients. Water quality in East Bay (located at the northeastern part of Hillsborough Bay, which is an embayment in Tampa Bay) is not improving at the same rate as the rest of the bay. East Bay is the center of shipping activity in Tampa Bay and the seventh largest port in the United States. One of the primary cargoes is phosphate ore and related products such as fertilizer. The potential for nutrient loading to East Bay from shipping activities is high and has not previously been measured. Nitrogen and phosphorus loads from East Bay to Hillsborough Bay were measured during selected time periods during June 1992 through May 1993; these data were used to estimate seasonal and annual loads. These loads were evaluated to determine whether the loss of fertilizer products from shipping activities resulted in increased nutrient loading to Hillsborough Bay. Discharge was measured, and water-quality samples were collected at the head of East Bay (exiting McKay Bay), and at the mouth of East Bay. Discharge and nitrogen and phosphorus concentrations for the period June 1992 through May 1993 were used to compute loads. Discharges from McKay Bay, Delaney Creek, and East Bay are highly variable because of the effect of tide. Flow patterns during discharge measurements generally were unidirectional in McKay Bay and Delaney Creek, but more complex, bidirectional patterns were observed at the mouth of East Bay. Tidally affected discharge data were digitally filtered with the Godin filter to remove the effects of tide so that residual, or net, discharge could be determined. Daily mean discharge from McKay Bay ranged from -1,900 to 2,420 cubic feet per second; from Delaney Creek, -3.8 to 162 cubic feet per second; and from East

46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 1 2013-10-01 2013-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island...

46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 1 2011-10-01 2011-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island...

46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 1 2014-10-01 2014-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island...

46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 1 2012-10-01 2012-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island...

46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 1 2010-10-01 2010-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island...

CASCO BAY PLAN

EPA Science Inventory

Casco Bay lies at the heart of Maine's most populated area. The health of its waters, wetlands, and wildlife depend in large part on the activities of the quarter-million residents who live in its watershed. Less than 30 years ago, portions of Casco Bay were off-limits to recr...

Seasonal variability of equilibrium factor and unattached fractions of radon and thoron in different regions of Punjab, India.

PubMed

Saini, Komal; Singh, Parminder; Singh, Prabhjot; Bajwa, B S; Sahoo, B K

2017-02-01

A survey was conducted to estimate equilibrium factor and unattached fractions of radon and thoron in different regions of Punjab state, India. Pin hole based twin cup dosimeters and direct progeny sensor techniques have been utilized for estimation of concentration level of radon, thoron and their progenies. Equilibrium factor calculated from radon, thoron and their progenies concentration has been found to vary from 0.15 to 0.80 and 0.008 to 0.101 with an average value of 0.44 and 0.036 for radon and thoron respectively. Equilibrium factor for radon has found to be highest in winter season and lowest in summer season whereas for thoron highest value is observed in winter and rainy season and lowest in summer. Unattached fractions of radon and thoron have been found to vary from 0.022 to 0.205 and 0.013 to 0.212 with an average value of 0.099 and 0.071 respectively. Unattached fractions have found to be highest in winter season and lowest in rainy and summer season. Copyright © 2016 Elsevier Ltd. All rights reserved.

Assessment for water quality by artificial neural network in Daya Bay, South China Sea.

PubMed

Wu, Mei-Lin; Wang, You-Shao; Gu, Ji-Dong

2015-10-01

In this study, artificial neural network such as a self-organizing map (SOM) was used to assess for the effects caused by climate change and human activities on the water quality in Daya Bay, South China Sea. SOM has identified the anthropogenic effects and seasonal characters of water quality. SOM grouped the four seasons as four groups (winter, spring, summer and autumn). The Southeast Asian monsoons, northeasterly from October to the next April and southwesterly from May to September have also an important influence on the water quality in Daya Bay. Spatial pattern is mainly related to anthropogenic activities and hydrodynamics conditions. In spatial characteristics, the water quality in Daya Bay was divided into two groups by chemometrics. The monitoring stations (S3, S8, S10 and S11) were in these area (Dapeng Ao, Aotou Harbor) and northeast parts of Daya Bay, which are areas of human activity. The thermal pollution has been observed near water body in Daya Bay Nuclear Power Plant (S5). The rest of the monitoring sites were in the south, central and eastern parts of Daya Bay, which are areas that experience water exchanges from South China Sea. The results of this study may provide information on the spatial and temporal patterns in Daya Bay. Further research will be carry out more research concerning functional changes in the bay ecology with respect to changes in climatic factor, human activities and bay morphology in Daya Bay.

78 FR 62293 - Safety Zone, Oyster Festival 30th Anniversary Fireworks Display, Oyster Bay; Oyster Bay, NY

Federal Register 2010, 2011, 2012, 2013, 2014

2013-10-15

... Safety Zone, Oyster Festival 30th Anniversary Fireworks Display, Oyster Bay; Oyster Bay, NY AGENCY: Coast... zone on the navigable waters of Oyster Bay near Oyster Bay, NY for the Oyster Festival 30th Anniversary... Oyster Festival 30th Anniversary Fireworks Display is scheduled for October 19, 2013 and is one of...

Chesapeake Bay: Introduction to an Ecosystem.

ERIC Educational Resources Information Center

Environmental Protection Agency, Washington, DC.

The Chesapeake Bay is the largest estuary in the contiguous United States. The Bay and its tidal tributaries make up the Chesapeake Bay ecosystem. This document, which focuses of various aspects of this ecosystem, is divided into four major parts. The first part traces the geologic history of the Bay, describes the overall physical structure of…

75 FR 16005 - Drawbridge Operation Regulation; Port of Coos Bay Railroad Bridge, Coos Bay, North Bend, OR

Federal Register 2010, 2011, 2012, 2013, 2014

2010-03-31

...-AA09 Drawbridge Operation Regulation; Port of Coos Bay Railroad Bridge, Coos Bay, North Bend, OR AGENCY... regulation for the Coos Bay Railroad Bridge, Coos Bay, mile 9.0, at North Bend, Oregon to delete the... necessary to make the sound signals used at the bridge consistent with other bridges in the area and to...

Minimum Bayes risk image correlation

NASA Technical Reports Server (NTRS)

Minter, T. C., Jr.

1980-01-01

In this paper, the problem of designing a matched filter for image correlation will be treated as a statistical pattern recognition problem. It is shown that, by minimizing a suitable criterion, a matched filter can be estimated which approximates the optimum Bayes discriminant function in a least-squares sense. It is well known that the use of the Bayes discriminant function in target classification minimizes the Bayes risk, which in turn directly minimizes the probability of a false fix. A fast Fourier implementation of the minimum Bayes risk correlation procedure is described.

Fraction Reduction through Continued Fractions

ERIC Educational Resources Information Center

Carley, Holly

2011-01-01

This article presents a method of reducing fractions without factoring. The ideas presented may be useful as a project for motivated students in an undergraduate number theory course. The discussion is related to the Euclidean Algorithm and its variations may lead to projects or early examples involving efficiency of an algorithm.

Bay BC's: A Multidisciplinary Approach To Teaching about the Chesapeake Bay.

ERIC Educational Resources Information Center

Slattery, Britt Eckhardt

The Chesapeake Bay is the largest estuary in North America, providing food and habitat for an abundance of fish and wildlife. This booklet provides lesson plans for lower elementary students introducing the Chesapeake, its inhabitants, and pollution problems, and suggesting ways that individuals can contribute to the Bay's restoration. Background…

75 FR 17329 - Safety Zone; Big Bay Fourth of July Fireworks, San Diego Bay, San Diego, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-06

...-AA00 Safety Zone; Big Bay Fourth of July Fireworks, San Diego Bay, San Diego, CA AGENCY: Coast Guard... safety zone on the navigable waters of the San Diego Bay in support of the Big Bay July Fourth Show to Benefit the San Diego Armed Services YMCA. This temporary safety zone is necessary to provide for the...

Reducing Methylmercury Accumulation in the Food Webs of San Francisco Bay and Its Local Watersheds

PubMed Central

Davis, J.A.; Looker, R.E.; Yee, D.; Marvin-DiPasquale, M.; Grenier, J.L.; Austin, C.M.; McKee, L.J.; Greenfield, B.K.; Brodberg, R.; Blum, J.D.

2013-01-01

San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds.

PubMed

Davis, J A; Looker, R E; Yee, D; Marvin-Di Pasquale, M; Grenier, J L; Austin, C M; McKee, L J; Greenfield, B K; Brodberg, R; Blum, J D

2012-11-01

San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Davis, J.A., E-mail: jay@sfei.org; Looker, R.E.; Yee, D.

San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for themore » past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce

Diurnal variation of oxygen and carbonate system parameters in Tampa Bay and Florida Bay

USGS Publications Warehouse

Yates, K.K.; Dufore, C.; Smiley, N.; Jackson, C.; Halley, R.B.

2007-01-01

Oxygen and carbonate system parameters were measured, in situ, over diurnal cycles in Tampa Bay and Florida Bay, Florida. All system parameters showed distinct diurnal trends in Tampa Bay with an average range of diurnal variation of 39.1 μmol kg− 1 for total alkalinity, 165.1 μmol kg− 1 for total CO2, 0.22 for pH, 0.093 mmol L− 1 for dissolved oxygen, and 218.1 μatm for pCO2. Average range of diurnal variation for system parameters in Tampa Bay was 73% to 93% of the seasonal range of variability for dissolved oxygen and pH. All system parameters measured in Florida Bay showed distinct variation over diurnal time-scales. However, clear diurnal trends were less evident. The average range of diurnal variability in Florida Bay was 62.8 μmol kg− 1 for total alkalinity, 130.4 μmol kg− 1 for total CO2, 0.13 for pH, 0.053 mmol L− 1 for dissolved oxygen, and 139.8 μatm for pCO2. The average range of diurnal variation was 14% to 102% of the seasonal ranges for these parameters. Diurnal variability in system parameters was most influenced by primary productivity and respiration of benthic communities in Tampa Bay, and by precipitation and dissolution of calcium carbonate in Florida Bay. Our data indicate that use of seasonal data sets without careful consideration of diurnal variability may impart significant error in calculations of annual carbon and oxygen budgets. These observations reinforce the need for higher temporal resolution measurements of oxygen and carbon system parameters in coastal ecosystems.

Mineral compositions of plutonic rocks from the Lewis Hills massif, Bay of Islands ophiolite

NASA Technical Reports Server (NTRS)

Smith, Susan E.; Elthon, Don

1988-01-01

Mineral compositions of residual and cumulate rocks from the Lewis Hills massif of the Bay of Islands ophiolite complex are reported and interpreted in the context of magnetic processes involved in the geochemical evolution of spatially associated diabase dikes. The mineral compositions reflect greater degrees of partial melting than most abyssal peridotites do and appear to represent the most depleted end of abyssal peridotite compositions. Subsolidus equilibration between Cr-Al spinal and olivine generally has occurred at temperatures of 700 to 900 C. The spinel variations agree with the overall fractionation of basaltic magmas producing spinels with progressively lower Cr numbers. The compositions of clinopyroxenes suggest that the fractionation of two different magma series produced the various cumulate rocks.

Trophic accumulation of PSP toxins in zooplankton during Alexandrium fundyense blooms in Casco Bay, Gulf of Maine, April-June 1998. II. . Zooplankton abundance and size-fractionated community composition

NASA Astrophysics Data System (ADS)

Turner, Jefferson T.; Doucette, Gregory J.; Keafer, Bruce A.; Anderson, Donald M.

2005-09-01

During spring blooms of the toxic dinoflagellate Alexandrium fundyense in Casco Bay, Maine in 1998, we investigated vectorial intoxication of various zooplankton size fractions with PSP toxins, including zooplankton community composition from quantitative zooplankton samples (>102 μm), as well as zooplankton composition in relation to toxin levels in various size fractions (20-64, 64-100, 100-200, 200-500, >500 μm). Zooplankton abundance in 102 μm mesh samples was low (most values<10,000 animals m -3) from early April through early May, but increased to maxima in mid-June (cruise mean=121,500 animals m -3). Quantitative zooplankton samples (>102 μm) were dominated by copepod nauplii, and Oithona similis copepodites and adults at most locations except for those furthest inshore. At these inshore locations, Acartia hudsonica copepodites and adults were usually dominant. Larger copepods such as Calanus finmarchicus, Centropages typicus, and Pseudocalanus spp. were found primarily offshore, and at much lower abundances than O. similis. Rotifers, mainly present from late April to late May, were most abundant inshore. The marine cladoceran Evadne nordmani was sporadically abundant, particularly in mid-June. Microplankton in 20-64 μm size fractions was generally dominated by A. fundyense, non-toxic dinoflagellates, and tintinnids. Microplankton in 64-100 μm size fractions was generally dominated by larger non-toxic dinoflagellates, tintinnids, aloricate ciliates, and copepod nauplii, and in early May, rotifers. Some samples (23%) in the 64-100 μm size fractions contained abundant cells of A. fundyense, presumably due to sieve clogging, but most did not contain A. fundyense cells. This suggests that PSP toxin levels in those samples were due to vectorial intoxication of microzooplankters such as heterotrophic dinoflagellates, tintinnids, aloricate ciliates, rotifers, and copepod nauplii via feeding on A. fundyense cells. Dominant taxa in zooplankton fractions varied

Influence of solar radiation on DOM release from resuspended Florida Bay sediments

NASA Astrophysics Data System (ADS)

Shank, G. C.; Evans, A.; Jaffé, R.; Yamashita, Y.

2009-12-01

This study investigated dissolved organic matter (DOM) release from resuspended Florida Bay sediments under dark and sunlit conditions. Much of Florida Bay (located between Everglades and Florida Keys) is very shallow (< 2 m) so sediment resuspension events have the potential to substantially impact the concentration and composition of DOM in the water column. For our study, sediments were collected at several sites across Florida Bay and ranged from 3-11 percent organic carbon (by weight). Sediments were resuspended in oligotrophic seawater for 48 hours in 1 L quartz flasks in the dark and under simulated solar radiation (SunTest XLS+) at concentrations of 100 mg L-1 and 1 g L-1 (wet weight). Final solutions were analyzed for DOC, chromophoric dissolved organic matter (CDOM), and Excitation Emission Matrix (EEM) fluorescence. Results showed little to no DOC increases in the resuspensions performed under dark conditions, but substantial release of DOM in irradiated resuspensions, especially at high sediment concentrations where DOC increases ranged from 100-500%. The sediments also released substantial quantities of CDOM to solution under irradiated conditions. The magnitude of DOC increases in irradiated resuspensions were well-correlated with the amount of particulate organic carbon (POC) added. Data from EEM-PARAFAC analyses suggests the photochemically produced DOM was comprised of desorbed humic material with a smaller fraction from microbial mediated processes. Our study provides evidence that sediment resuspension episodes in shallow sunlit waters such as Florida Bay have the potential to provide an important source of organic carbon to overlying waters.

Discharge between San Antonio Bay and Aransas Bay, southern Gulf Coast, Texas, May-September 1999

USGS Publications Warehouse

East, Jeffery W.

2001-01-01

Along the Gulf Coast of Texas, many estuaries and bays are important habitat and nurseries for aquatic life. San Antonio Bay and Aransas Bay, located about 50 and 30 miles northeast, respectively, of Corpus Christi, are two important estuarine nurseries on the southern Gulf Coast of Texas (fig. 1). According to the Texas Parks and Wildlife Department, “Almost 80 percent of the seagrasses [along the Texas Gulf Coast] are located in the Laguna Madre, an estuary that begins just south of Corpus Christi Bay and runs southward 140 miles to South Padre Island. Most of the remaining seagrasses, about 45,000 acres, are located in the heavily traveled San Antonio, Aransas and Corpus Christi Bay areas” (Shook, 2000).Population growth has led to greater demands on water supplies in Texas. The Texas Water Development Board, the Texas Parks and Wildlife Department, and the Texas Natural Resource Conservation Commission have the cooperative task of determining inflows required to maintain the ecological health of the State’s streams, rivers, bays, and estuaries. To determine these inflow requirements, the three agencies collect data and conduct studies on the need for instream flows and freshwater/ saline water inflows to Texas estuaries.To assist in the determination of freshwater inflow requirements, the U.S. Geological Survey (USGS), in cooperation with the Texas Water Development Board, conducted a hydrographic survey of discharge (flow) between San Antonio Bay and Aransas Bay during the period May–September 1999. Automated instrumentation and acoustic technology were used to maximize the amount and quality of data that were collected, while minimizing personnel requirements. This report documents the discharge measured at two sites between the bays during May–September 1999 and describes the influences of meteorologic (wind and tidal) and hydrologic (freshwater inflow) conditions on discharge between the two bays. The movement of water between the bays is

Unlocking Ft: Modeling thermodynamic controls and isotope fractionation factors in nutrient limited environments

NASA Astrophysics Data System (ADS)

Druhan, J. L.; Giannetta, M.; Sanford, R. A.

2017-12-01

In recent years, reactive transport principles have expanded from early applications, largely based in contaminant hydrology, to a wide range of biologically mediated redox environments including marine sedimentary diagenesis, terrestrial metal ore deposits, soils, and critical zone weathering profiles. A common observation across this diversity of systems is that they often function under energetically limited conditions in comparison to those typical of contaminated aquifers subject to engineered remediation techniques. As a result, the kinetic rate expressions traditionally employed within reactive transport frameworks to simulate microbially mediated redox transformations have required modification. This was recognized in a series of seminal papers by Jin and Bethke (2005, 2007) in which the authors expanded upon a Monod rate law to include a thermodynamic potential factor `Ft' which exerts a limitation on the overall rate based on the thermodynamic driving force of the electron transfer reaction. This new rate expression is now commonly implemented within many of the major reactive transport software packages, though appropriate application has yet to be thoroughly demonstrated. Notably, the characteristically large partitioning of stable isotopes during microbially mediated reactions, which is extensively utilized to identify and quantify these redox transformations, has yet to be simulated under conditions in which the Ft term may be expected to exert a significant mass dependent influence. Here, we develop a series of simplified simulations for the microbially mediated reduction of sulfate based on the datasets reported by Jin and Bethke, and apply appropriate mass-bias within the Ft term to consider the extent to which the resulting isotopic fractionation is consistent with that observed in energetically limited systems. We show that the Ft term can exert a significant influence on the observed fractionation factor under common environmental conditions

Distributions and contamination assessment of heavy metals in the surface sediments of western Laizhou Bay: Implications for the sources and influencing factors.

PubMed

Zhang, Pan; Hu, Rijun; Zhu, Longhai; Wang, Peng; Yin, Dongxiao; Zhang, Lianjie

2017-06-15

Heavy metals (Cu, Pb, Cr, Cd and As) contents in surface sediments from western Laizhou Bay were analysed to evaluate the spatial distribution pattern and their contamination level. As was mainly concentrated in the coastal area near the estuaries and the other metals were mainly concentrated in the central part of the study area. The heavy metals were present at unpolluted levels overall evaluated by the sediment quality guidelines and geoaccumulation index. Principal component analysis suggest that Cu, Pb and Cd were mainly sourced from natural processes and As was mainly derived from anthropogenic inputs. Meanwhile, Cr originated from both natural processes and anthropogenic contributions. Tidal currents, sediments and human activities were important factors affecting the distribution of heavy metals. The heavy metal environment was divided into four subareas to provide a reference for understanding the distribution and pollution of heavy metals in the estuary-bay system. Copyright © 2017 Elsevier Ltd. All rights reserved.

75 FR 11837 - Chesapeake Bay Watershed Initiative

Federal Register 2010, 2011, 2012, 2013, 2014

2010-03-12

... DEPARTMENT OF AGRICULTURE Commodity Credit Corporation Chesapeake Bay Watershed Initiative AGENCY...: Notice of availability of program funds for the Chesapeake Bay Watershed Initiative. SUMMARY: The... through the Chesapeake Bay Watershed Initiative for agricultural producers in the Chesapeake Bay watershed...

Urban Greening Bay Area

EPA Pesticide Factsheets

Information about the San Francisco Bay Water Quality Project (SFBWQP) Urban Greening Bay Area, a large-scale effort to re-envision urban landscapes to include green infrastructure (GI) making communities more livable and reducing stormwater runoff.

Concentration of PSP (Paralytic Shellfish Poisoning) Toxin On Shellfish From Inner Ambon Bay and Kao Bay North Halmahera

NASA Astrophysics Data System (ADS)

Pello, F. S.; Haumahu, S.; Huliselan, N. V.; Tuapattinaja, M. A.

2017-10-01

The Inner Ambon Bay and Kao Bay have potential on fisheries resources which one of them is molluscs. Molluscs especially for class bivalve have economical values and are consumed by coastal community. The research had been done to analyze saxitoxin (STX) concentration on bivalves from Kao Bay and Inner Ambon Bay. The Saxitoxin Elisa Test Kit Protocol was used to determine saxitoxin concentration. The measurement showed that the highest concentration of saxitoxin (392.42 µg STXeq/100g shellfish meat) was Gafrarium tumidum from Ambon Bay, whereas concentration of saxitoxin (321.83 µg STXeq/100g shellfish meat) was Mactra mera from Kao Bay

77 FR 30443 - Safety Zone; Alexandria Bay Chamber of Commerce, St. Lawrence River, Alexandria Bay, NY

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-23

...-AA00 Safety Zone; Alexandria Bay Chamber of Commerce, St. Lawrence River, Alexandria Bay, NY AGENCY... Commerce fireworks display. The safety zone established by this proposed rule is necessary to protect... spectators and vessels during the Alexandria Bay Chamber of Commerce fireworks display. Regulatory Analyses...

Modelling Wind Effects on Subtidal Salinity in Apalachicola Bay, Florida

NASA Astrophysics Data System (ADS)

Huang, W.; Jones, W. K.; Wu, T. S.

2002-07-01

Salinity is an important factor for oyster and estuarine productivity in Apalachicola Bay. Observations of salinity at oyster reefs have indicated a high correlation between subtidal salinity variations and the surface winds along the bay axis in an approximately east-west direction. In this paper, we applied a calibrated hydrodynamic model to examine the surface wind effects on the volume fluxes in the tidal inlets and the subtidal salinity variations in the bay. Model simulations show that, due to the large size of inlets located at the east and west ends of this long estuary, surface winds have significant effects on the volume fluxes in the estuary inlets for the water exchanges between the estuary and ocean. In general, eastward winds cause the inflow from the inlets at the western end and the outflow from inlets at the eastern end of the bay. Winds at 15 mph speed in the east-west direction can induce a 2000 m3 s-1 inflow of saline seawater into the bay from the inlets, a rate which is about 2·6 times that of the annual average freshwater inflow from the river. Due to the varied wind-induced volume fluxes in the inlets and the circulation in the bay, the time series of subtidal salinity at oyster reefs considerably increases during strong east-west wind conditions in comparison to salinity during windless conditions. In order to have a better understanding of the characteristics of the wind-induced subtidal circulation and salinity variations, the researchers also connected model simulations under constant east-west wind conditions. Results show that the volume fluxes are linearly proportional to the east-west wind stresses. Spatial distributions of daily average salinity and currents clearly show the significant effects of winds on the bay.

Description of gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California

USGS Publications Warehouse

Woodrow, Donald L.; John L. Chin,; Wong, Florence L.; Fregoso, Theresa A.; Jaffe, Bruce E.

2017-06-27

Seventy-two gravity cores were collected by the U.S. Geological Survey in 1990, 1991, and 2000 from San Pablo Bay and Carquinez Strait, California. The gravity cores collected within San Pablo Bay contain bioturbated laminated silts and sandy clays, whole and broken bivalve shells (mostly mussels), fossil tube structures, and fine-grained plant or wood fragments. Gravity cores from the channel wall of Carquinez Strait east of San Pablo Bay consist of sand and clay layers, whole and broken bivalve shells (less than in San Pablo Bay), trace fossil tubes, and minute fragments of plant material.

Phytophthora ramorum isolated from California bay laurel inflorescences and mistletoe: possible implications relating to disease spread

Treesearch

Gary A. Chastagner; Kathy Riley; Norm Dart

2008-01-01

Since 2005, we have been studying the spread and development of Phytophthora ramorum at a Christmas tree farm near Los Gatos, California. This research has shown that distance from infected plants, predominantly California bay laurel (Umbellularia californica) (referred to as ?bay? throughout), is an important factor relating to...

Chlorophyll-a Concentrations Affected by Discharge and Climate Conditions in Galveston Bay, Texas

NASA Astrophysics Data System (ADS)

Shen, X.; Gao, H.; Zhang, S.

2017-12-01

As the transition zones between river and ocean, estuaries face increasing pressure on their ecosystem health due to changes of freshwater quantity and quality—especially under the impacts of population growth, land use/land cover change, and climate change. Located at the northeast of Houston, Galveston Bay is of particular social economic importance for the State of Texas. Its freshwater inflow primarily arises from two rivers, the San Jacinto and the Trinity. While it is well recognized that Chlorophyll a (chla) concentration—an indicator of ecosystem health—is closely linked to river inflows and other environmental factors, no quantitative relationships have been established. The objectives of this study are to identify the spatial-temporal variations of chla, and to investigate the impacts of freshwater inflow and climatic factors on chla variability—so that prediction models can be developed for chla forecasting to provide scientific support for ecological management (in Galveston Bay). A 10-year validated remote sensing dataset is used in this analysis. The results show that chla has higher concentrations near the shoreline, as compared to the center of the bay. Temporally, chla tends to be higher in wet years than in dry years. Similarly, the seasonal fluctuations of chla are more significant during the wet months (from February to May) than the dry months (especially from August to December). Chla in the bay is primarily determined by discharge from the Trinity River in AMJ (April, May, June) and JAS (July, August, September). However, the driving factor is mainly water temperature in OND (October, November, December). In JFM (January, February, March), almost all of the factors (except discharge from the San Jacinto River) show significant correlation with chla. Based on these analyses, a chla prediction model is developed and tested. This result can provide scientific support for coastal environmental management in Galveston Bay, maintaining the

Chesapeake Bay TMDL Document

EPA Pesticide Factsheets

This page provides the Total Maximum Daily Load (TMDL) report for the Chesapeake Bay. It includes the executive summary, main report, and appendices. The Chesapeake Bay TMDL was established by U.S. EPA Region 3 on December 29, 2010

A computer model of long-term salinity in San Francisco Bay: Sensitivity to mixing and inflows

USGS Publications Warehouse

Uncles, R.J.; Peterson, D.H.

1995-01-01

A two-level model of the residual circulation and tidally-averaged salinity in San Francisco Bay has been developed in order to interpret long-term (days to decades) salinity variability in the Bay. Applications of the model to biogeochemical studies are also envisaged. The model has been used to simulate daily-averaged salinity in the upper and lower levels of a 51-segment discretization of the Bay over the 22-y period 1967–1988. Observed, monthly-averaged surface salinity data and monthly averages of the daily-simulated salinity are in reasonable agreement, both near the Golden Gate and in the upper reaches, close to the delta. Agreement is less satisfactory in the central reaches of North Bay, in the vicinity of Carquinez Strait. Comparison of daily-averaged data at Station 5 (Pittsburg, in the upper North Bay) with modeled data indicates close agreement with a correlation coefficient of 0.97 for the 4110 daily values. The model successfully simulates the marked seasonal variability in salinity as well as the effects of rapidly changing freshwater inflows. Salinity variability is driven primarily by freshwater inflow. The sensitivity of the modeled salinity to variations in the longitudinal mixing coefficients is investigated. The modeled salinity is relatively insensitive to the calibration factor for vertical mixing and relatively sensitive to the calibration factor for longitudinal mixing. The optimum value of the longitudinal calibration factor is 1.1, compared with the physically-based value of 1.0. Linear time-series analysis indicates that the observed and dynamically-modeled salinity-inflow responses are in good agreement in the lower reaches of the Bay.

Prophylaxis vs. on-demand treatment with BAY 81-8973, a full-length plasma protein-free recombinant factor VIII product: results from a randomized trial (LEOPOLD II).

PubMed

Kavakli, K; Yang, R; Rusen, L; Beckmann, H; Tseneklidou-Stoeter, D; Maas Enriquez, M

2015-03-01

BAY 81-8973 is a new full-length human recombinant factor VIII product manufactured with technologies to improve consistency in glycosylation and expression to optimize clinical performance. To demonstrate superiority of prophylaxis vs. on demand therapy with BAY 81-8973 in patients with severe hemophilia A. In this multinational,randomized, open-label crossover study (LEOPOLD II;ClinicalTrials.gov identifier: NCT01233258), males aged 12–65 years with severe hemophilia A were randomized to twice-weekly prophylaxis (20-30 IU kg(-1)), 3-times-weekly prophylaxis (30-40 IU kg(-1)), or on-demand treatment with BAY 81-8973. Potency labeling for BAY 81-8973 was based on the chromogenic substrate assay or adjusted to the one-stage assay. Primary efficacy endpoint was annualized number of all bleeds (ABR). Adverse events (AEs)and immunogenicity were also assessed. Eighty patients (on demand, n = 21; twice-weekly prophylaxis, n = 28; 3-times-weekly prophylaxis, n = 31) were treated and analyzed. Mean ± SD ABR was significantly lower with prophylaxis (twice-weekly, 5.7 ± 7.2; 3-times-weekly, 4.3 ± 6.5; combined, 4.9 ± 6.8) vs. on-demand treatment (57.7 ± 24.6; P < 0.0001, ANOVA). Median ABR was reduced by 97% with prophylaxis (twice-weekly, 4.0;3-times-weekly, 2.0; combined, 2.0) vs. on-demand treatment (60.0). Median ABR was higher with twice-weekly vs. 3-times-weekly prophylaxis during the first 6-month treatment period (4.1 vs. 2.0) but was comparable in the second 6-month period (1.1 vs. 2.0). Few patients reported treatment-related AEs (4%); no treatment-related serious AEs or inhibitors were reported. Twice weekly or 3-times-weekly prophylaxis with BAY 81-8973 reduced median ABR by 97% compared with on-demand therapy, confirming the superiority of prophylaxis. Treatment with BAY 81-8973 was well tolerated.

USGS Tampa Bay Pilot Study

USGS Publications Warehouse

Yates, K.K.; Cronin, T. M.; Crane, M.; Hansen, M.; Nayeghandi, A.; Swarzenski, P.; Edgar, T.; Brooks, G.R.; Suthard, B.; Hine, A.; Locker, S.; Willard, D.A.; Hastings, D.; Flower, B.; Hollander, D.; Larson, R.A.; Smith, K.

2007-01-01

Providing a web-based digital information management system of information for scientists and the public, including a system that supports the work of those officials who must make decisions that affect the state of the bay. The Tampa Bay Study is in its sixth year and will continue through September 2007. This paper presents a non-inclusive summary of key findings associated with the six primary project components listed above. Component 4 (above) is described in detail in the following chapter 13. More information on the Tampa Bay Study is available from our on-line digital information system for the Tampa Bay Study at http://gulfsci.usgs.gov.

Facility Layout Problems Using Bays: A Survey

NASA Astrophysics Data System (ADS)

Davoudpour, Hamid; Jaafari, Amir Ardestani; Farahani, Leila Najafabadi

2010-06-01

Layout design is one of the most important activities done by industrial Engineers. Most of these problems have NP hard Complexity. In a basic layout design, each cell is represented by a rectilinear, but not necessarily convex polygon. The set of fully packed adjacent polygons is known as a block layout (Asef-Vaziri and Laporte 2007). Block layout is divided by slicing tree and bay layout. In bay layout, departments are located in vertical columns or horizontal rows, bays. Bay layout is used in real worlds especially in concepts such as semiconductor and aisles. There are several reviews in facility layout; however none of them focus on bay layout. The literature analysis given here is not limited to specific considerations about bay layout design. We present a state of art review for bay layout considering some issues such as the used objectives, the techniques of solving and the integration methods in bay.

Biological interference of optical backscatterance sensors in Tampa Bay, Florida

USGS Publications Warehouse

Schoellhamer, D.H.

1993-01-01

Optical backscatterance (OBS, D&A Instruments, Inc.1 1 Use of brand, firm, or trade names in this paper is for identification purposes only and does not constitute endorsement by the U.S. Geological Survey.) sensors for measuring suspended-solids concentrations have been deployed in Tampa Bay to monitor resuspension of bottom sediments. This paper describes biological factors that affected the OBS sensors deployed in Tampa Bay and discusses deployment strategies that minimize biological interference. Phytoplankton may interfere with the OBS sensors when the suspended-solids concentration is near or below the sensor response threshold. Fish swimming in front of the OBS sensors caused spikes in the OBS sensor output, so the median average was more appropriate than the mean average. An algal slime on the OBS sensors caused excessive backscatterance that dominated the backscatterance from suspended material. Because of the fouling problem, deployments were limited to less than a week, and OBS sensors were cleaned daily, if possible. Calibration of OBS sensors with water samples collected from Tampa Bay was satisfactory when biological interference was not significant. When properly deployed, the OBS sensors can successfully monitor sediment resuspension in Tampa Bay and similar subtropical estuaries. ?? 1993.

76 FR 37641 - Safety Zone; Independence Day Fireworks Celebration for the City of Half Moon Bay, Half Moon Bay, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-28

...-AA00 Safety Zone; Independence Day Fireworks Celebration for the City of Half Moon Bay, Half Moon Bay... temporary safety zone in the navigable waters of Half Moon Bay, off of Pillar Point Harbor beach, Half Moon Bay, CA in support of the Independence Day Fireworks Celebration for the City of Half Moon Bay...

Prediction of outcome in multiorgan resections for cancer using a bayes-network.

PubMed

Udelnow, Andrej; Leinung, Steffen; Grochola, Lukasz Filipp; Henne-Bruns, Doris; Wfcrl, Peter

2013-01-01

The long-term success of multivisceral resections for cancer is difficult to forecast due to the complexity of factors influencing the prognosis. The aim of our study was to assess the predictivity of a Bayes network for the postoperative outcome and survival. We included each oncologic patient undergoing resection of 4 or more organs from 2002 till 2005 at the Ulm university hospital. Preoperative data were assessed as well as the tumour classification, the resected organs, intra- and postoperative complications and overall survival. Using the Genie 2.0 software we developed a Bayes network. Multivisceral tumour resections were performed in 22 patients. The receiver operating curve areas of the variables "survival >12 months" and "hospitalisation >28 days" as predicted by the Bayes network were 0.81 and 0.77 and differed significantly from 0.5 (p: 0.019 and 0.028, respectively). The positive predictive values of the Bayes network for these variables were 1 and 0.8 and the negative ones 0.71 and 0.88, respectively. Bayes networks are useful for the prognosis estimation of individual patients and can help to decide whether to perform a multivisceral resection for cancer.

Radioisotopic data of sediment collected in Mobile and Bon Secour Bays, Alabama

USGS Publications Warehouse

Marot, Marci E.; Smith, Christopher G.

2012-01-01

The focus of this study was to determine the extent of natural and (or) anthropogenic impacts on the sedimentary records of Mobile and Bon Secour Bays, Alabama during the last 150 years. These bays are unique in that anthropogenic activities are generally widespread and span both the eastern and western shorelines. However, there is a clear distinction in the types of human development and infrastructure between the western and eastern shorelines. These activities and the differences in land-use and -change influence the overall supply and remobilization of sediment to and within the bay. These factors could subsequently threaten the health and integrity of these environments and their ability to mitigate against long-term processes associated with climate change. In an attempt to characterize long-term accretion rates within the Mobile Bay Estuarine System (MBES), seven box cores were collected and analyzed for excess lead-210 (210Pbxs, the difference between total and supported 210Pb) and cesium-137 (137Cs) activities. The MBES receives sediment and water from the Alabama and Tombigbee River watersheds, which converge into the Mobile-Tensaw River (MTR) system just prior to discharging into Mobile Bay. Riverine discharge from the MTR system to the bay is second only to the Mississippi River discharge to the Gulf of Mexico for the conterminous United States.

33 CFR 165.1187 - Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay...

Code of Federal Regulations, 2011 CFR

2011-07-01

... Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. 165.1187 Section 165.1187... Limited Access Areas Eleventh Coast Guard District § 165.1187 Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. (a) Location. All waters extending...

33 CFR 165.1187 - Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay...

Code of Federal Regulations, 2010 CFR

2010-07-01

... Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. 165.1187 Section 165.1187... Limited Access Areas Eleventh Coast Guard District § 165.1187 Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. (a) Location. All waters extending...

Nutrients and Narragansett Bay

EPA Science Inventory

Narragansett Bay has been heavily fertilized by anthropogenic nutrients for almost 120 years. This presentation discusses the first introductions of human sources of nutrients to the Bay, via sewage and urban runoff, in the late 1890s through to the recent reductions in sewage ef...

Benthic fluxes in San Francisco Bay

USGS Publications Warehouse

Hammond, Douglas E.; Fuller, C.; Harmon, D.; Hartman, Blayne; Korosec, M.; Miller, L.G.; Rea, R.; Warren, S.; Berelson, W.; Hager, S.W.

1985-01-01

Measurements of benthic fluxes have been made on four occasions between February 1980 and February 1981 at a channel station and a shoal station in South San Francisco Bay, using in situ flux chambers. On each occasion replicate measurements of easily measured substances such as radon, oxygen, ammonia, and silica showed a variability (??1??) of 30% or more over distances of a few meters to tens of meters, presumably due to spatial heterogeneity in the benthic community. Fluxes of radon were greater at the shoal station than at the channel station because of greater macrofaunal irrigation at the former, but showed little seasonal variability at either station. At both stations fluxes of oxygen, carbon dioxide, ammonia, and silica were largest following the spring bloom. Fluxes measured during different seasons ranged over factors of 2-3, 3, 4-5, and 3-10 (respectively), due to variations in phytoplankton productivity and temperature. Fluxes of oxygen and carbon dioxide were greater at the shoal station than at the channel station because the net phytoplankton productivity is greater there and the organic matter produced must be rapidly incorporated in the sediment column. Fluxes of silica were greater at the shoal station, probably because of the greater irrigation rates there. N + N (nitrate + nitrite) fluxes were variable in magnitude and in sign. Phosphate fluxes were too small to measure accurately. Alkalinity fluxes were similar at the two stations and are attributed primarily to carbonate dissolution at the shoal station and to sulfate reduction at the channel station. The estimated average fluxes into South Bay, based on results from these two stations over the course of a year, are (in mmol m-2 d-1): O2 = -27 ?? 6; TCO2 = 23 ?? 6; Alkalinity = 9 ?? 2; N + N = -0.3 ?? 0.5; NH3 = 1.4 ?? 0.2; PO4 = 0.1 ?? 0.4; Si = 5.6 ?? 1.1. These fluxes are comparable in magnitude to those in other temperate estuaries with similar productivity, although the seasonal

Bay breeze climatology at two sites along the Chesapeake bay from 1986-2010: Implications for surface ozone.

PubMed

Stauffer, Ryan M; Thompson, Anne M

Hourly surface meteorological measurements were coupled with surface ozone (O 3 ) mixing ratio measurements at Hampton, Virginia and Baltimore, Maryland, two sites along the Chesapeake Bay in the Mid-Atlantic United States, to examine the behavior of surface O 3 during bay breeze events and quantify the impact of the bay breeze on local O 3 pollution. Analyses were performed for the months of May through September for the years 1986 to 2010. The years were split into three groups to account for increasingly stringent environmental regulations that reduced regional emissions of nitrogen oxides (NO x ): 1986-1994, 1995-2002, and 2003-2010. Each day in the 25-year record was marked either as a bay breeze day, a non-bay breeze day, or a rainy/cloudy day based on the meteorological data. Mean eight hour (8-h) averaged surface O 3 values during bay breeze events were 3 to 5 parts per billion by volume (ppbv) higher at Hampton and Baltimore than on non-bay breeze days in all year periods. Anomalies from mean surface O 3 were highest in the afternoon at both sites during bay breeze days in the 2003-2010 study period. In conjunction with an overall lowering of baseline O 3 after the 1995-2002 period, the percentage of total exceedances of the Environmental Protection Agency (EPA) 75 ppbv 8-h O 3 standard that occurred on bay breeze days increased at Hampton for 2003-2010, while remaining steady at Baltimore. These results suggest that bay breeze circulations are becoming more important to causing exceedance events at particular sites in the region, and support the hypothesis of Martins et al. (2012) that highly localized meteorology increasingly drives air quality events at Hampton.

BAY REGION ATMOSPHERIC CHEMISTRY EXPERIMENT (BRACE)

EPA Science Inventory

The Tampa Bay Estuary Program (TBEP) was formed in 1991 to assist the community in developing a comprehensive plan to restore and protect Tampa Bay. The ecological indicator of the health of the Bay is the coverage of seagrasses, historically in decline, which are important to...

Naïve Bayes classification in R.

PubMed

Zhang, Zhongheng

2016-06-01

Naïve Bayes classification is a kind of simple probabilistic classification methods based on Bayes' theorem with the assumption of independence between features. The model is trained on training dataset to make predictions by predict() function. This article introduces two functions naiveBayes() and train() for the performance of Naïve Bayes classification.

78 FR 14185 - Safety Zone; MODU KULLUK; Kiliuda Bay, Kodiak Island, AK to Captains Bay, Unalaska Island, AK

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-05

... Mobile Offshore Drilling Unit (MODU) KULLUK currently located in Kiliuda Bay, Kodiak Island, Alaska with... large ocean-going drill vessel, while it is under tow from Kiliuda Bay, Kodiak Island to Captains Bay...

San Francisco and Bay Area, CA, USA

NASA Image and Video Library

1991-06-14

STS040-152-100 (5-14 June 1991) --- Although clouds obscure part of the city of San Francisco and the mouth of San Francisco Bay, development and physiographic features in the immediate vicinity of the bay are well displayed. The photograph clearly shows the eastern part of the city, including the Embarcadero, the Bay Bridge, which was damaged in the 1989 earthquake, and Candlestick Park, San Mateo, and Dumbarton Bridges, cross the southern portion of the bay. Vari-colored salt ponds also rim the southern Bay near Moffett Field. Highway 280 runs along the San Andreas fault south of the city. On the eastern margin of the bay are Berkeley the Sacramento River and the Haywood and Calaveras faults.

Distribution of trace elements in the coastal sea sediments of Maslinica Bay, Croatia

NASA Astrophysics Data System (ADS)

Mikulic, Nenad; Orescanin, Visnja; Elez, Loris; Pavicic, Ljiljana; Pezelj, Durdica; Lovrencic, Ivanka; Lulic, Stipe

2008-02-01

Spatial distributions of trace elements in the coastal sea sediments and water of Maslinica Bay (Southern Adriatic), Croatia and possible changes in marine flora and foraminifera communities due to pollution were investigated. Macro, micro and trace elements’ distributions in five granulometric fractions were determined for each sediment sample. Bulk sediment samples were also subjected to leaching tests. Elemental concentrations in sediments, sediment extracts and seawater were measured by source excited energy dispersive X-ray fluorescence (EDXRF). Concentrations of the elements Cr, Cu, Zn, and Pb in bulk sediment samples taken in the Maslinica Bay were from 2.1 to over six times enriched when compared with the background level determined for coarse grained carbonate sediments. A low degree of trace elements leaching determined for bulk sediments pointed to strong bonding of trace elements to sediment mineral phases. The analyses of marine flora pointed to higher eutrophication, which disturbs the balance between communities and natural habitats.

A HABITAT SUITABILITY INDEX FOR THE BAY SCALLOP ARGOPECTEN IRRADIANS

EPA Science Inventory

Platform Presentation at a Scientific Meeting. A survey of Lagoon Pond, Martha's Vineyard, MA, USA was conducted in September 2005 to determine the combination of habitat factors most highly correlated with bay scallop (Argopecten irradians) abundance. A stratified random samplin...

77 FR 21890 - Drawbridge Operation Regulation; Sturgeon Bay Ship Canal, Sturgeon Bay, WI

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-12

... Street and Maple-Oregon Bridges so vehicular traffic congestion would not develop on downtown Sturgeon... the efficient movement of vehicular traffic in Sturgeon Bay. The Sturgeon Bay Ship Canal is... experiences a significant increase in vehicular and vessel traffic during the peak tourist and navigation...

Computing the Partial Fraction Decomposition of Rational Functions with Irreducible Quadratic Factors in the Denominators

ERIC Educational Resources Information Center

Man, Yiu-Kwong

2012-01-01

In this note, a new method for computing the partial fraction decomposition of rational functions with irreducible quadratic factors in the denominators is presented. This method involves polynomial divisions and substitutions only, without having to solve for the complex roots of the irreducible quadratic polynomial or to solve a system of linear…

GPU MrBayes V3.1: MrBayes on Graphics Processing Units for Protein Sequence Data.

PubMed

Pang, Shuai; Stones, Rebecca J; Ren, Ming-Ming; Liu, Xiao-Guang; Wang, Gang; Xia, Hong-ju; Wu, Hao-Yang; Liu, Yang; Xie, Qiang

2015-09-01

We present a modified GPU (graphics processing unit) version of MrBayes, called ta(MC)(3) (GPU MrBayes V3.1), for Bayesian phylogenetic inference on protein data sets. Our main contributions are 1) utilizing 64-bit variables, thereby enabling ta(MC)(3) to process larger data sets than MrBayes; and 2) to use Kahan summation to improve accuracy, convergence rates, and consequently runtime. Versus the current fastest software, we achieve a speedup of up to around 2.5 (and up to around 90 vs. serial MrBayes), and more on multi-GPU hardware. GPU MrBayes V3.1 is available from http://sourceforge.net/projects/mrbayes-gpu/. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

The Role of Environmental Forcing in Controlling Water Retention Gyres in Subsystems of Narragansett Bay

NASA Astrophysics Data System (ADS)

Balt, C.; Kincaid, C. R.; Ullman, D. S.

2010-12-01

Greenwich Bay and the Providence River represent two subsystems of the Narragansett Bay (RI) estuary with chronic water quality problems. Both underway and moored Acoustic Doppler Current Profiler (ADCP) observations have shown the presence of large-scale, subtidal gyres within these subsystems. Prior numerical models of Narragansett Bay, developed using the Regional Ocean Modeling System (ROMS), indicate that prevailing summer sea breeze conditions are favorable to the evolution of stable circulation gyres, which increase retention times within each subsystem. Fluid dynamics laboratory models of the Providence River, conducted in the Geophysical Fluid Dynamics Laboratory of the Research School of Earth Sciences (Australian National University), reproduce gyres that match first order features of the ADCP data. These laboratory models also reveal details of small-scale eddies along the edges of the retention gyre. We report results from spatially and temporally detailed current meter deployments (using SeaHorse Tilt Current Meters) in both subsystems, which reveal details on the growth and decay of gyres under various spring-summer forcing conditions. In particular, current meters were deployed during the severe flooding events in the Narragansett Bay watershed during March, 2010. A combination of current meter data and high-resolution ROMS modeling is used to show how gyres effectively limit subtidal exchange from the Providence River and Greenwich Bay and to understand the forcing conditions that favor efficient flushing. The residence times of stable gyres within these regions can be an order of magnitude larger than values predicted by fraction of water methods. ROMS modeling is employed to characterize gyre energy, stability, and flushing rates for a wide range of seasonal, wind and runoff scenarios.

Atmospheric PCB concentrations at Terra Nova Bay, Antarctica.

PubMed

Gambaro, Andrea; Manodori, Laura; Zangrando, Roberta; Cincinelli, Alessandra; Capodaglio, Gabriele; Cescon, Paolo

2005-12-15

Concentrations of gas-phase polychlorobiphenyls (PCBs) were studied over an austral summer at a site in Terra Nova Bay, Antarctica. Gas-phase concentrations of individual PCB congeners in the atmosphere of Terra Nova Bay ranged from below the detection limit to 0.25 pg m(-3), with a mean concentration of sigmaPCB of 1.06 pg m(-3). The PCB profile was dominated by lower-chlorinated PCB congeners; in fact >78% of the total PCB content was due to congeners with 1-4 chlorine atoms and only about 10% with 5-7 chlorines, whereas higher-chlorinated PCB congeners were below detection limits. The mean sigmaPCB concentration obtained in this study were lower than those reported in previous Antarctic studies. Temporal concentration profiles of sigmaPCB do not correspond to seasonal temperature changes. In consideration of the low PCB concentrations observed, the studies with the wind roses, the regression between In P(PCB) and T(-1), and the distribution of congeners, we can hypothesize that PCB local source contributions are not very important, whereas long-distance transport is the prevalent factor bringing PCBs to Terra Nova Bay.

Toxicity of weathered Deepwater Horizon oil to bay anchovy (Anchoa mitchilli) embryos.

PubMed

O'Shaughnessy, Kathryn A; Forth, Heather; Takeshita, Ryan; Chesney, Edward J

2018-02-01

The BP-contracted Deepwater Horizon Macondo well blowout occurred on 20 April 2010 and lasted nearly three months. The well released millions of barrels of crude oil into the northern Gulf of Mexico, causing extensive impacts on pelagic, benthic, and estuarine fish species. The bay anchovy (Anchoa mitchilli) is an important zooplanktivore in the Gulf, serving as an ecological link between lower trophic levels and pelagic predatory fish species. Bay anchovy spawn from May through November in shallow inshore and estuarine waters throughout the Gulf. Because their buoyant embryos are a dominant part of the inshore ichthyoplankton throughout the summer, it is likely bay anchovy embryos encountered oil in coastal estuaries during the summer and fall of 2010. Bay anchovy embryos were exposed to a range of concentrations of two field-collected Deepwater Horizon oils as high-energy and low-energy water accommodated fractions (HEWAFs and LEWAFs, respectively) for 48h. The median lethal concentrations (LC 50 ) were lower in exposures with the more weathered oil (HEWAF, 1.48µg/L TPAH50; LEWAF, 1.58µg/L TPAH50) compared to the less weathered oil (HEWAF, 3.87µg/L TPAH50; LEWAF, 4.28µg/L TPAH50). To measure delayed mortality and life stage sensitivity between embryos and larvae, an additional 24h acute HEWAF exposure using the more weathered oil was run followed by a 24h grow-out period. Here the LC 50 was 9.71µg/L TPAH50 after the grow-out phase, suggesting a toxic effect of oil at the embryonic or hatching stage. We also found that exposures prepared with the more weathered Slick B oil produced lower LC 50 values compared to the exposures prepared with Slick A oil. Our results demonstrate that even relatively acute environmental exposure times can have a detrimental effect on bay anchovy embryos. Copyright © 2017 Elsevier Inc. All rights reserved.

Draft Detailed Project Report and Draft Environmental Assessment. Neah Bay Navigation Improvements, Neah Bay, Washington

DTIC Science & Technology

1993-11-01

navigation improvements for Neah Bay, Clallam Bay, and Port Angeles was begun under the Puget Sound and Adjacent Waters, General Investigations authority. The...Regonnaissance Report and Plan of Study. Puget Sound and Adjacent Waters. Washington. Northern Olympic Peninsula Shallow-Draft Naviaation Study, August 1983...operators from having to make long trips from the fishing grounds near Neah Bay to ports farther east in the Strait of Juan de Fuca or in Puget Sound . 9 9

33 CFR 117.871 - Coos Bay.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad bridge...

33 CFR 117.871 - Coos Bay.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad bridge...

33 CFR 117.871 - Coos Bay.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad bridge...

33 CFR 117.871 - Coos Bay.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad bridge...

33 CFR 117.871 - Coos Bay.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad bridge...

Changes in Landscape Pattern of Wetland around Hangzhou Bay

NASA Astrophysics Data System (ADS)

Lin, Wenpeng; Li, Yuan; Xu, Dan; Zeng, Ying

2018-04-01

Hangzhou Bay is an important estuarial coastal wetland, which offers a large number of land and ecological resources. It plays a significant role in the sustainable development of resources, environment and economy. In this paper, based on the remote sensing images in 1996, 2005 and 2013, we extracted the coastal wetland data and analyzed the wetland landscape pattern of the Hangzhou Bay in the past 20 years. The results show that: (1) the area of coastal wetland is heading downwards in the recent decades. Paddy field and the coastal wetland diminish greatly. (2) the single dynamic degree of wetland of the Hangzhou Bay displays that paddy fields and coastal wetlands are shrinking, but lakes, reservoirs and ponds are constantly expanding. (3) the wetland landscape pattern index shows that total patch area of the coastal wetland and paddy fields have gradually diminished. The Shannon diversity index, the Shannon evenness index as well as the landscape separation index of the coastal wetlands in the Hangzhou Bay increase steadily. The landscape pattern in the study area has shown a trend of high fragmentation, dominance decreases, but some dominant landscape still exist in this region. (4) Urbanization and natural factors lead to the reduction of wetland area. Besides the pressure of population is a major threat to the wetland. The study will provide scientific basis for long-term planning for this region.

Spatial and seasonal patterns of ichthyoplankton assemblages in the Haizhou Bay and its adjacent waters of China

NASA Astrophysics Data System (ADS)

Li, Zengguang; Ye, Zhenjiang; Wan, Rong

2015-12-01

Surveys were conducted in five voyages in Haizhou Bay and its adjacent coastal area from March to December 2011 during full moon spring tides. The ichthyoplankton assemblages and the environmental factors that affect their spatial and seasonal patterns were determined. Totally 35 and 12 fish egg and larvae taxa were identified, respectively. Over the past several decades, the egg and larval species composition has significantly changed in Haizhou Bay and its adjacent waters, most likely corresponding with the alteration of fishery resources, which are strongly affected by anthropogenic activities and climate change. The Bray-Curtis dissimilarity index identified four assemblages: near-shore bay assemblage, middle bay assemblage and two closely related assemblages (near-shore/middle bay assemblage and middle/edge of bay assemblage). The primary species of each assemblage principally reflected the spawning strategies of adult fish. The near-shore bay assemblage generally occurred in near-shore bay, with depths measuring <20 m, and the middle bay assemblage generally occurred in the middle of bay, with depths measuring 20 to 40 m. Spatial and seasonal variations in ichthyoplankton in each assemblage were determined by interactions between biological behavioral traits and oceanographic features, particularly the variation of local conditions within the constraint of a general reproductive strategy. The results of Spearman's rank correlation analysis indicated that both fish egg and larval abundance were positively correlated with depth, which is critical to the oceanographic features in Haizhou Bay.

Responses of upland herpetofauna to the restoration of Carolina Bays and thinning of forested Bay Margins.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ledvina, Joseph A.

2008-05-01

Research on the effects of wetland restoration on reptiles and amphibians is becoming more common, but almost all of these studies have observed the colonization of recently disturbed habitats that were completely dry at the time of restoration. In a similar manner, investigations herpetofaunal responses to forest management have focused on clearcuts, and less intensive stand manipulations are not as well studied. To evaluate community and population responses of reptiles and amphibians to hydrology restoration and canopy removal in the interior of previously degraded Carolina bays, I monitored herpetofauna in the uplands adjacent to six historically degraded Carolina bays atmore » the Savannah River Site (SRS) in South Carolina for four years after restoration. To evaluate the effects of forest thinning on upland herpetofauna, forests were thinned in the margins of three of these bays. I used repeated measures ANOVA to compare species richness and diversity and the abundance of selected species and guilds between these bays and with those at three reference bays that were not historically drained and three control bays that remained degraded. I also used Non-metric Multidimensional Scaling (NMDS) to look for community-level patterns based treatments.« less

Association of earthquakes and faults in the San Francisco Bay area using Bayesian inference

USGS Publications Warehouse

Wesson, R.L.; Bakun, W.H.; Perkins, D.M.

2003-01-01

Bayesian inference provides a method to use seismic intensity data or instrumental locations, together with geologic and seismologic data, to make quantitative estimates of the probabilities that specific past earthquakes are associated with specific faults. Probability density functions are constructed for the location of each earthquake, and these are combined with prior probabilities through Bayes' theorem to estimate the probability that an earthquake is associated with a specific fault. Results using this method are presented here for large, preinstrumental, historical earthquakes and for recent earthquakes with instrumental locations in the San Francisco Bay region. The probabilities for individual earthquakes can be summed to construct a probabilistic frequency-magnitude relationship for a fault segment. Other applications of the technique include the estimation of the probability of background earthquakes, that is, earthquakes not associated with known or considered faults, and the estimation of the fraction of the total seismic moment associated with earthquakes less than the characteristic magnitude. Results for the San Francisco Bay region suggest that potentially damaging earthquakes with magnitudes less than the characteristic magnitudes should be expected. Comparisons of earthquake locations and the surface traces of active faults as determined from geologic data show significant disparities, indicating that a complete understanding of the relationship between earthquakes and faults remains elusive.

A parameter quantifying radiation damping of bay oscillations excited by incident tsunamis

NASA Astrophysics Data System (ADS)

Endoh, Takahiro; Inazu, Daisuke; Waseda, Takuji; Hibiya, Toshiyuki

2018-04-01

The transient response of a bay with a narrow mouth to incident tsunamis is interpreted as the convolution of the input signal with the impulse response obtained by an inverse Fourier transform of the response curve of the oscillatory system with one degree of freedom. The rate of radiation damping associated with energy escaping seaward through the bay mouth is expressed in terms of the quality factor Q, which determines the decaying envelope of the impulse response. The value of Q of the resonant peak is approximated by the ratio of the resonant frequency ω0 to the bandwidth between frequencies at which the power spectral density of sea level within the bay drops to half of the peak value. Since the shape of the frequency power spectrum during the tsunami event is almost similar to that in the normal state in the neighborhood of ω0, Q can be estimated from sea level datasets in the normal state. Although the amplitude and phase of the impulse response need to be adjusted using the first crest or trough of the observed leading wave, this approach proves to work well in examining the transient responses of Miyako Bay and Kushimoto Bay on the Japanese Pacific coast to incident tsunamis.

33 CFR 165.1195 - Regulated Navigation Area; Humboldt Bay Bar Channel and Humboldt Bay Entrance Channel, Humboldt...

Code of Federal Regulations, 2010 CFR

2010-07-01

... Navigation Area (RNA) includes all navigable waters of the Humboldt Bay Bar Channel and the Humboldt Bay Entrance Channel, Humboldt Bay, California. (b) Definitions. As used in this section— COTP means the Captain of the Port as defined in Title 33, Code of Federal Regulations, Section 1.01-30 and 3.55-20...

33 CFR 165.1195 - Regulated Navigation Area; Humboldt Bay Bar Channel and Humboldt Bay Entrance Channel, Humboldt...

Code of Federal Regulations, 2011 CFR

2011-07-01

... Navigation Area (RNA) includes all navigable waters of the Humboldt Bay Bar Channel and the Humboldt Bay Entrance Channel, Humboldt Bay, California. (b) Definitions. As used in this section— COTP means the Captain of the Port as defined in Title 33, Code of Federal Regulations, Section 1.01-30 and 3.55-20...

33 CFR 165.1195 - Regulated Navigation Area; Humboldt Bay Bar Channel and Humboldt Bay Entrance Channel, Humboldt...

Code of Federal Regulations, 2012 CFR

2012-07-01

... Navigation Area (RNA) includes all navigable waters of the Humboldt Bay Bar Channel and the Humboldt Bay Entrance Channel, Humboldt Bay, California. (b) Definitions. As used in this section— COTP means the Captain of the Port as defined in Title 33, Code of Federal Regulations, Section 1.01-30 and 3.55-20...

33 CFR 165.1195 - Regulated Navigation Area; Humboldt Bay Bar Channel and Humboldt Bay Entrance Channel, Humboldt...

Code of Federal Regulations, 2013 CFR

2013-07-01

... Navigation Area (RNA) includes all navigable waters of the Humboldt Bay Bar Channel and the Humboldt Bay Entrance Channel, Humboldt Bay, California. (b) Definitions. As used in this section— COTP means the Captain of the Port as defined in Title 33, Code of Federal Regulations, Section 1.01-30 and 3.55-20...

33 CFR 165.1195 - Regulated Navigation Area; Humboldt Bay Bar Channel and Humboldt Bay Entrance Channel, Humboldt...

Code of Federal Regulations, 2014 CFR

2014-07-01

... Navigation Area (RNA) includes all navigable waters of the Humboldt Bay Bar Channel and the Humboldt Bay Entrance Channel, Humboldt Bay, California. (b) Definitions. As used in this section— COTP means the Captain of the Port as defined in Title 33, Code of Federal Regulations, Section 1.01-30 and 3.55-20...

Pathways to fraction learning: Numerical abilities mediate the relation between early cognitive competencies and later fraction knowledge.

PubMed

Ye, Ai; Resnick, Ilyse; Hansen, Nicole; Rodrigues, Jessica; Rinne, Luke; Jordan, Nancy C

2016-12-01

The current study investigated the mediating role of number-related skills in the developmental relationship between early cognitive competencies and later fraction knowledge using structural equation modeling. Fifth-grade numerical skills (i.e., whole number line estimation, non-symbolic proportional reasoning, multiplication, and long division skills) mapped onto two distinct factors: magnitude reasoning and calculation. Controlling for participants' (N=536) demographic characteristics, these two factors fully mediated relationships between third-grade general cognitive competencies (attentive behavior, verbal and nonverbal intellectual abilities, and working memory) and sixth-grade fraction knowledge (concepts and procedures combined). However, specific developmental pathways differed by type of fraction knowledge. Magnitude reasoning ability fully mediated paths from all four cognitive competencies to knowledge of fraction concepts, whereas calculation ability fully mediated paths from attentive behavior and verbal ability to knowledge of fraction procedures (all with medium to large effect sizes). These findings suggest that there are partly overlapping, yet distinct, developmental pathways from cognitive competencies to general fraction knowledge, fraction concepts, and fraction procedures. Copyright © 2016 Elsevier Inc. All rights reserved.

Chemical characteristics, deposition fluxes and source apportionment of precipitation components in the Jiaozhou Bay, North China

NASA Astrophysics Data System (ADS)

Xing, Jianwei; Song, Jinming; Yuan, Huamao; Li, Xuegang; Li, Ning; Duan, Liqin; Qu, Baoxiao; Wang, Qidong; Kang, Xuming

2017-07-01

To systematically illustrate the chemical characteristics, deposition fluxes and potential sources of the major components in precipitation, 49 rainwater and snow water samples were collected in the Jiaozhou Bay from June 2015 to May 2016. We determined the pH, electric conductivity (EC) and the concentrations of main ions (Na+, K+, Ca2 +, Mg2 +, NH4+, SO42 -, NO3-, Cl- and F-) as well as analyzed their source contributions and atmospheric transport. The results showed that the precipitation samples were severely acidified with an annual volume-weighted mean (VWM) pH of 4.77. The frequency of acid precipitation (pH < 5.6) reached up to 71.4%, and the mean EC value was relatively higher at 64.9 μS cm- 1, all of which suggested a higher atmospheric pollution level over the Jiaozhou Bay. Surprisingly, NH4+ (40.4%), which is higher than Ca2 + (29.3%), is the dominant species of cations, which is different from that in most areas of China. SO42 - was the most abundant anions, and accounted for 41.6% of the total anions. The wet deposition fluxes of sulfur (S) was 12.98 kg ha- 1 yr- 1. Rainfall, emission intensity and long-range transport of natural and anthropogenic pollutants together control the concentrations and wet deposition fluxes of chemical components in the precipitation. Non-sea-salt SO42 - and NO3- were the primary acid components while NH4+ and non-sea-salt Ca2 + were the dominating neutralizing constituents. The comparatively lower rainwater concentration of Ca2 + in the Jiaozhou Bay than that in other regions in Northern China likely to be a cause for the strong acidity of precipitation. Based on the combined enrichment factor and correlation analysis, the integrated contributions of sea-salt, crustal and anthropogenic sources to the total ions of precipitation were estimated to be 28.7%, 14.5% and 56.8%, respectively. However, the marine source fraction of SO42 - may be underestimated as the contribution from marine phytoplankton was neglected

Anthropogenically induced changes in sediment and biogenic silica fluxes in Chesapeake Bay

USGS Publications Warehouse

Colman, Steven M.; Bratton, John F.

2003-01-01

Sediment cores as long as 20 m, dated by 14C, 210Pb, and 137Cs methods and pollen stratigraphy, provide a history of diatom productivity and sediment-accumulation rates in Chesapeake Bay. We calculated the flux of biogenic silica and total sediment for the past 1500 yr for two high-sedimentation-rate sites in the mesohaline section of the bay. The data show that biogenic silica flux to sediments, an index of diatom productivity in the bay, as well as its variability, were relatively low before European settlement of the Chesapeake Bay watershed. In the succeeding 300–400 yr, the flux of biogenic silica has increased by a factor of 4 to 5. Biogenic silica fluxes still appear to be increasing, despite recent nutrient-reduction efforts. The increase in diatom-produced biogenic silica has been partly masked (in concentration terms) by a similar increase in total sediment flux. This history suggests the magnitude of anthropogenic disturbance of the estuary and indicates that significant changes had occurred long before the twentieth century.

Antropogenically induced changes in sediment and biogenic silica fluxes in Chesapeake Bay

USGS Publications Warehouse

Colman, Steven M.; Bratton, J.F.

2003-01-01

Sediment cores as long as 20 m, dated by 14C, 210Pb, and 137Cs methods and pollen stratigraphy, provide a history of diatom productivity and sediment-accumulation rates in Chesapeake Bay. We calculated the flux of biogenic silica and total sediment for the past 1500 yr for two high-sedimentation-rate sites in the mesohaline section of the bay. The data show that biogenic silica flux to sediments, an index of diatom productivity in the bay, as well as its variability, were relatively low before European settlement of the Chesapeake Bay watershed. In the succeeding 300-400 yr, the flux of biogenic silica has increased by a factor of 4 to 5. Biogenic silica fluxes still appear to be increasing, despite recent nutrient-reduction efforts. The increase in diatom-produced biogenic silica has been partly masked (in concentration terms) by a similar increase in total sediment flux. This history suggests the magnitude of anthropogenic disturbance of the estuary and indicates that significant changes had occurred long before the twentieth century.

Impact of Geomorphological Changes to Harbor Resonance During Meteotsunamis: The Vela Luka Bay Test Case

NASA Astrophysics Data System (ADS)

Denamiel, Cléa; Šepić, Jadranka; Vilibić, Ivica

2018-05-01

In engineering studies, harbor resonance, including quality and amplification factors, is typically computed for swell and waves with periods shorter than 10 min. However, in various locations around the world, such as Vela Luka Bay in Croatia, meteotsunami waves of periods greater than 10 min can excite the bay or harbor natural modes and produce substantial structural damages. In this theoretical study, the impact of some geomorphological changes of Vela Luka Bay—i.e. deepening of the bay, dredging the harbor, adding a pier or a marina—to the amplification of the meteotsunami waves are presented for a set of 6401 idealized pressure wave field forcing used to derive robust statistics. The most substantial increase in maximum elevation is found when the Vela Luka harbor is dredged to a 5 m depth, which is in contradiction with the calculation of the quality factor showing a decrease of the harbor natural resonance. It has been shown that the forcing energy content at different frequency bands should also be taken into account when estimating the quality and amplification factors, as their typical definitions derived from the peak frequency of the sea level spectrum fail to represent the harbor response during meteotsunami events. New definitions of these factors are proposed in this study and are shown to be in good agreement with the results of the statistical analysis of the Vela Luka Bay maximum elevation results. In addition, the presented methodology can easily be applicable to any other location in the world where meteotsunamis occur.

Quantitative polymerase chain reaction for transforming growth factor-β applied to a field study of fish health in Chesapeake Bay tributaries

USGS Publications Warehouse

Harms, Craig A.; Ottinger, Christopher A.; Blazer, Vicki S.; Densmore, Christine L.; Pieper, L.H.; Kennedy-Stoskopf, S.

2000-01-01

Fish morbidity and mortality events in Chesapeake Bay tributaries have aroused concern over the health of this important aquatic ecosystem. We applied a recently described method for quantifying mRNA of an immunosuppressive cytokine, transforming growth factor-β (TGF-β), by reverse transcription quantitative-competitive polymerase chain reaction to a field study of fish health in the Chesapeake Basin, and compared the results to those of a traditional cellular immunoassay macrophage bactericidal activity. We selected the white perch (Morone americana) as the sentinel fish species because of its abundance at all of the collection sites. White perch were sampled from Chesapeake Bay tributaries in June, August, and October 1998. Splenic mononuclear cell TGF-β mRNA levels increased and anterior kidney macrophage bactericidal activity decreased, particularly in eastern shore tributaries, from June to August and October. The results of the two assays correlated inversely (Kendall's τ b = -0.600; p = 0.0102). The results indicated both temporal and spatial modulation of white perch immune systems in the Chesapeake Basin, and demonstrated the utility of quantitative PCR for TGF-β as a molecular biomarker for field assessment of teleost fish immune status.

The influence of bottom boundary layer hydrodynamics on sediment focusing in a contaminated bay.

PubMed

Graham, Neil D; Bouffard, Damien; Loizeau, Jean-Luc

2016-12-01

precipitating factors in sediment focusing. While the spread of contaminants from the bay may occur through the transport of fine suspended sediments in shallower zones of the bay (<60 m) by longshore littoral currents, results suggest that particle-bound contaminants are likely to remain within the bay.

Eastern Hudson Bay, Canada

NASA Image and Video Library

2017-12-08

Each winter sea ice forms over the salty waters of frigid northeastern Canada's Hudson Bay. As sunlight lengthens and weather warms, ice begins to break up and melt, with retreat typically starting in May and melt-out completed sometime in July. Since the 1970s, the timing of sea ice breakup in Hudson Bay has changed, with melting beginning earlier in the spring. The Moderate Resolution Imaging Spectroradiometer (MODIS) aboard NASA’s Aqua satellite captured this a true-color image of Hudson Bay on March 26, 2013. Although snow still covers the surrounding land, ice has already begun to retreat from much of the eastern shore of the Bay visible in the image. A ring of bright white ice remains solidly frozen around the Belcher Islands in the southeast section of the Bay, but this ring is surrounded by blue waters and large chunks of ice. In the southwest, a similar situation is seen at Akimiski Island. The shelf of bright white ice gives way to open water in the south, as well as fractured, blue-tinted ice. The blue tint generally indicates water logging as ice begins to soften. The Aqua satellite captured a similar image of early ice melt on Hudson Bay on April 6, 2012. That image can be viewed at: modis.gsfc.nasa.gov/gallery/individual.php?db_date=2012-0... NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

Chesapeake Bay Program Grant Guidance

EPA Pesticide Factsheets

Grant Guidance and appendices for the Chesapeake Bay Program that describes how the U.S. Environmental Protection Agency’s (EPA) Region 3’s Chesapeake Bay Program Office (CBPO) administers grant and cooperative agreement funds.

Subsurface structure of the East Bay Plain ground-water basin: San Francisco Bay to the Hayward fault, Alameda County, California

USGS Publications Warehouse

Catchings, R.D.; Borchers, J.W.; Goldman, M.R.; Gandhok, G.; Ponce, D.A.; Steedman, C.E.

2006-01-01

The area of California between the San Francisco Bay, San Pablo Bay, Santa Clara Valley, and the Diablo Ranges (East Bay Hills), commonly referred to as the 'East Bay', contains the East Bay Plain and Niles Cone ground-water basins. The area has a population of 1.46 million (2003 US Census), largely distributed among several cities, including Alameda, Berkeley, Fremont, Hayward, Newark, Oakland, San Leandro, San Lorenzo, and Union City. Major known tectonic structures in the East Bay area include the Hayward Fault and the Diablo Range to the east and a relatively deep sedimentary basin known as the San Leandro Basin beneath the eastern part of the bay. Known active faults, such as the Hayward, Calaveras, and San Andreas pose significant earthquake hazards to the region, and these and related faults also affect ground-water flow in the San Francisco Bay area. Because most of the valley comprising the San Francisco Bay area is covered by Holocene alluvium or water at the surface, our knowledge of the existence and locations of such faults, their potential hazards, and their effects on ground-water flow within the alluvial basins is incomplete. To better understand the subsurface stratigraphy and structures and their effects on ground-water and earthquake hazards, the U.S. Geological Survey (USGS), in cooperation with the East Bay Municipal Utility District (EBMUD), acquired a series of high-resolution seismic reflection and refraction profiles across the East Bay Plain near San Leandro in June 2002. In this report, we present results of the seismic imaging investigations, with emphasis on ground water.

Prophylaxis vs. on-demand treatment with BAY 81-8973, a full-length plasma protein-free recombinant factor VIII product: results from a randomized trial (LEOPOLD II)

PubMed Central

Kavakli, K; Yang, R; Rusen, L; Beckmann, H; Tseneklidou-Stoeter, D; Maas Enriquez, M

2015-01-01

Background BAY 81-8973 is a new full-length human recombinant factor VIII product manufactured with technologies to improve consistency in glycosylation and expression to optimize clinical performance. Objectives To demonstrate superiority of prophylaxis vs. on-demand therapy with BAY 81-8973 in patients with severe hemophilia A. Patients/Methods In this multinational, randomized, open-label crossover study (LEOPOLD II; ClinicalTrials.gov identifier: NCT01233258), males aged 12–65 years with severe hemophilia A were randomized to twice-weekly prophylaxis (20–30 IU kg−1), 3-times-weekly prophylaxis (30–40 IU kg−1), or on-demand treatment with BAY 81-8973. Potency labeling for BAY 81-8973 was based on the chromogenic substrate assay or adjusted to the one-stage assay. Primary efficacy endpoint was annualized number of all bleeds (ABR). Adverse events (AEs) and immunogenicity were also assessed. Results Eighty patients (on demand, n = 21; twice-weekly prophylaxis, n = 28; 3-times-weekly prophylaxis, n = 31) were treated and analyzed. Mean ± SD ABR was significantly lower with prophylaxis (twice-weekly, 5.7 ± 7.2; 3-times-weekly, 4.3 ± 6.5; combined, 4.9 ± 6.8) vs. on-demand treatment (57.7 ± 24.6; P < 0.0001, anova). Median ABR was reduced by 97% with prophylaxis (twice-weekly, 4.0; 3-times-weekly, 2.0; combined, 2.0) vs. on-demand treatment (60.0). Median ABR was higher with twice-weekly vs. 3-times-weekly prophylaxis during the first 6-month treatment period (4.1 vs. 2.0) but was comparable in the second 6-month period (1.1 vs. 2.0). Few patients reported treatment-related AEs (4%); no treatment-related serious AEs or inhibitors were reported. Conclusions Twice-weekly or 3-times-weekly prophylaxis with BAY 81-8973 reduced median ABR by 97% compared with on-demand therapy, confirming the superiority of prophylaxis. Treatment with BAY 81-8973 was well tolerated. PMID:25546368

Trends in the distribution of recent foraminifera in San Francisco Bay

USGS Publications Warehouse

Arnal, R.E.; Quinterno, P.J.; Conomos, T.J.; Gram, Ralph

1980-01-01

Thirty-one species of benthonic foraminifera were identified in surficial sediments of San Francisco Bay estuary; of these, 20 species were stained red by rose Bengal and are considered as live. Water depth, sediment textural characteristics, salinity, organic matter, sediment pH, and biological competition were considered as factors that might affect distribution of foraminifera. Four ecologic zones based on observed trends in the distribution and abundance of several species correlate well with some environmental factors. Four groups based on the Q-mode analysis of frequency counts of foraminiferal assemblages are reasonably similar to the four ecologic zones. These zones, showing restricted depth ranges, are: Inner Coastal Zone, where Elphidium incertum obscurum and Trochammina infiata are prominent; Outer Coastal Zone, dominated by Ammonia beccarii tepida and Elphidium incatum; Deep Bay Zone, where Elphidietla hannai, Elphidium incertum clavatum, Hopkinsina pacifica, and Bolivina spp. appear in abundance; and Deep Channel Zone, where Elphidiella hannai is most abundant. In the Inner Coastal Zone, salinity due to large fluctuations is a limiting factor for many species. Substrate textural characteristics are primary determinants of the distribution of agglutinated foraminifers. The percentage of organic matter in the sediment correlates well with the abundance of Elphidium incertum obscurum, a ubiquitous species in San Francisco Bay. Sediment pH is not critical. Biologic competition can be estimated by comparing the percentage of a species with the number of species present in the assemblage, as shown for Ammonia beccarii tepida and Elphidiella hannai.

[Atmospheric depositions of biogenic elements and their ecological effects on marine ecosystem of Jiaozhou Bay: A review].

PubMed

Xing, Jian Wei; Song, Jin Ming; Yuan, Hua Mao; Li, Xue Gang; Li, Ning; Duan, Li Qin; Qu, Bao Xiao; Kang, Xu Ming

2017-01-01

As a typical semi-closed bay, Jiaozhou Bay, is remarkably affected by human activities. Biogenic elements transported into the oceans by the atmospheric deposition of anthropogenic particles can lead to profound impacts on the ecosystem of Jiaozhou Bay. In this paper, the researches of atmospheric dry and wet depositions in the Jiaozhou Bay were systematically summarized from the following three aspects: study methods, variation characteristics of the fluxes and their influencing factors and the ecological effects of atmospheric deposition. The concentrations and fluxes of nitrogen species in atmospheric dry and wet depositions were very high in the Jiaozhou Bay compared with other bays, estuaries and marginal seas around the world. The dissolved inorganic nitrogen (DIN) was the main component of the total dissolved nitrogen (TDN) and the dissolved organic nitrogen (DON) accounted for 22%-31% of TDN. However, the concentrations and fluxes of phosphate and silicate species were very low. The atmospheric deposition fluxes of (NO 3 - -N+NO 2 - -N) were slightly higher than terrestrial inputs, while the fluxes of NH 4 + -N, PO 4 3- -P and SiO 3 2- -Si were very low compared with terrestrial inputs. The concentration of total suspended particulates (TSP) in the air, the intensity of the emission sources, precipitation amount and meteorological conditions are the major factors influencing the atmospheric depositions of biogenic elements, which can increase the primary productivity, change the structure of nutrients and the structure of phytoplankton communities in surface seawater and further promote the succession of phytoplankton dominant species from diatom to dinoflagellate in the Jiaozhou Bay. On that basis, the future research should be focused on constructing the monitoring network for atmospheric dry and wet depositions, accurately quantifying the deposition rates of aerosol particles of different forms and sizes, recognizing the ecological effects and

Spatio-temporal variations in bloom of the red-tide dinoflagellate Karenia mikimotoi in Imari Bay, Japan, in 2014: Factors controlling horizontal and vertical distribution.

PubMed

Aoki, Kazuhiro; Kameda, Takahiko; Yamatogi, Toshifumi; Ishida, Naoya; Hirae, Sou; Kawaguchi, Mayumi; Syutou, Toshio

2017-11-15

A massive bloom of the dinoflagellate Karenia mikimotoi appeared in 2014 in Imari Bay, Japan. Bloom dynamics and hydrographical conditions were examined by field survey. The bloom initially developed in the eastern area of Imari Bay, subsequently after rainfall during the neap tides, cell density exceeded over 10,000cellsml. Vertical distribution of K. mikimotoi was primarily controlled by the light intensity and secondarily by the water quality during the daytime. Almost all cell-density maxima occurred in depths with weak daytime light intensities of <300μmolm -2 s -1 . In some cases of weak light intensity, cell-density maxima occurred in depths with favorable hydrodynamic conditions for the growth. Spatially classified areas were identified by cluster analysis using the growth rate calculated from seawater temperature and salinity. This study quantitatively evaluated the environmental factors of the eastern area, where the bloom initially occurred, during the development of the bloom. Copyright © 2017 Elsevier Ltd. All rights reserved.

Assessing change of environmental dynamics by legislation in Japan, using red tide occurrence in Ise Bay as an indicator.

PubMed

Suzuki, Chika

2016-01-30

Tokyo Bay, Ise Bay, and the Seto Inland Sea are the total pollutant load control target areas in Japan. A significant correlation between the incidence of red tides and water quality has been observed in the Seto Inland Sea (Honjo, 1991). However, while red tides also occur in Ise Bay and Tokyo Bay, similar correlations have not been observed. Hence, it is necessary to understand what factors cause red tides to effectively manage these semi-closed systems. This study aims to investigate the relationship between the dynamics of the Red Tide Index and nitrogen regulation as well as phosphorus regulation, even in Ise Bay where, unlike Tokyo Bay, there are few observation items, by selecting a suitable objective variable. The introduction of a new technique that uses the Red Tide Index has revealed a possibility that the total pollution load control has influenced the dynamics of red tide blooms in Ise Bay. Copyright © 2015 Elsevier Ltd. All rights reserved.

Virioplankton dynamics are related to eutrophication levels in a tropical urbanized bay

PubMed Central

Cabral, Anderson S.; Lessa, Mariana M.; Junger, Pedro C.; Thompson, Fabiano L.; Paranhos, Rodolfo

2017-01-01

Virioplankton are an important and abundant biological component of marine and freshwater ecosystems. Often overlooked, aquatic viruses play an important role in biogeochemical cycles on a global scale, infecting both autotrophic and heterotrophic microbes. Viral diversity, abundance, and viral interactions at different trophic levels in aqueous environments are not well understood. Tropical ecosystems are less frequently studied than temperate ecosystems, but could provide new insights into how physical and chemical variability can shape or force microbial community changes. In this study, we found high viral abundance values in Guanabara Bay relative to other estuaries around the world. Viral abundance was positively correlated with bacterioplankton abundance and chlorophyll a concentrations. Moreover, prokaryotic and viral abundance were positively correlated with eutrophication, especially in surface waters. These results provide novel baseline data on the quantitative distribution of aquatic viruses in tropical estuaries. They also provide new information on a complex and dynamic relationship in which environmental factors influence the abundance of bacterial hosts and consequently their viruses. Guanabara Bay is characterized by spatial and seasonal variations, and the eutrophication process is the most important factor explaining the structuring of virioplankton abundance and distribution in this tropical urbanized bay. PMID:28362842

Speciation of heavy metals Cu, Ni and Zn by modified BCR sequential extraction procedure in sediments from Banten Bay, Banten Province, Indonesia

NASA Astrophysics Data System (ADS)

Lestari; Budiyanto, F.; Hindarti, D.

2018-02-01

Banten Bay is categorized as a marine area that is busy with marine tourism activities, settlements and also industries. One potential impact of the condition is the occurrence of pollution from both industrial and domestic sources, erosion and sedimentation in the coastal environment. Samples were collected from 25 representative stations in April 2016. Chemical speciation of three heavy metals (Cu, Ni, and Zn) was studied using a modified sequential extraction procedure proposed by the European Standard, Measurements and Testing (SM&T) program, formerly the Community Bureau of Reference (BCR). The aims of this study are to determine geochemical speciation of 4 bounds of metal: acid-soluble, reducible, oxidizable and residual, and to assess their impacts in the sediments of Banten Bay, Indonesia. The result shows that the percentage of Copper (45.90-83.75%), Nickel (18.28-65.66%), and Zinc (30.45-79.51%) were mostly accumulated in residual fraction of the total concentrations. The Risk Assessment Code (RAC) reveals that about 0-7.07% of Copper and 1.11-24.35 % of Zinc at sites exist in exchangeable fraction and therefore, they are in low risk category. While 7.34-34.90 of Ni at sites exists in exchangeable fraction and therefore, it is in medium risk category to aquatic environment.

A Creek to Bay Biological Assessment in Oakland, California

NASA Astrophysics Data System (ADS)

Ahumada, E.; Ramirez, N.; Lopez, A.; Avila, M.; Ramirez, J.; Arroyo, D.; Bracho, H.; Casanova, A.; Pierson, E.

2011-12-01

In 2007, the Surface Water Ambient Monitoring Program (SWAMP) assessed the impact of trash on water quality in the Peralta Creek which is located in the Fruitvale district of Oakland, CA. This 2011 follow-up study will take further steps in evaluating the physical and biological impacts of pollution and human development on Peralta Creek and in the San Leandro Bay, where the Creek empties into the larger San Francisco Bay estuary. This study will utilize two forms of biological assessment in order to determine the level of water quality and ecosystem health of Peralta Creek and San Leandro Bay in Oakland, California. A Rapid Bioassesment Protocal (RBP) will be used as the method of biological assessment for Peralta Creek. RBP uses a biotic index of benthic macroinvertebrates to provide a measure of a water body's health. Larval trematodes found in two mud snails (Ilynassa obsoleta and Cerithidea californica) will be used to evaluate the health of the San Leandro Bay. Due to the complex life cycle of trematodes, the measure of trematode diversity and richness in host species serves as an indicator of estuarine health (Huspeni 2005). We have completed the assessment of one section of Peralta Creek, located at 2465 34th Avenue, Oakland, CA 94601. Abundance results indicate a moderately healthy creek because there were high levels of pollution tolerant benthic macroinvertebrates. The tolerant group of benthic macroinvertebrates includes such organisms as flatworms, leeches, and scuds. This is possibly due to this section of the creek being pumped up to the surface from culverts impacting the macroinvertebrate's life cycle. Another contributing factor to creek health is the amount of organic debris found in the creek, which inhibits the flow and oxygenation of the water, allowing for more pollution tolerant aquatic insects to persist. Further investigation is being conducted to fully assess the Peralta Creek watershed; from the preliminary results one can surmise that

Bay Mills' Bold Approach

ERIC Educational Resources Information Center

Freedman, Eric

2011-01-01

It's a long, long way from Bay Mills Community College, near the shores of frigid Lake Superior, to Detroit. But distance, time and demographics aside, the school and the city are united by Bay Mills' status as the nation's only tribally controlled college that authorizes quasi-public schools, known officially as public school academies. And it's…

An Appetite for Fractions

ERIC Educational Resources Information Center

Wilkerson, Trena L.; Bryan, Tommy; Curry, Jane

2012-01-01

This article describes how using candy bars as models gives sixth-grade students a taste for learning to represent fractions whose denominators are factors of twelve. Using paper models of the candy bars, students explored and compared fractions. They noticed fewer different representations for one-third than for one-half. The authors conclude…

Holocene sedimentation in Richardson Bay, California

USGS Publications Warehouse

Connor, Cathy L.

1983-01-01

Examination of foraminifers, diatoms, ostracodes, clay mineralogy, and sediment-size variation from 9 borehole sites along the salt-marsh margins of Richardson Bay reveals a record of gradual infilling of fine-grained estuarine sediments. Over the past 10,000 years this area was transformed from a V-shaped Pleistocene stream valley to a flat-floored arm of the San Francisco Bay estuary. A radiocarbon date obtained from a basal peat overlying nonmarine alluvial sand near the town of Mill Valley indicates that stable salt-marsh vegetation was present in the northwestern arm of Richardson Bay 4600?165 years ago and agrees within error limits with a Holocene sea-level curve developed by Atwater, Hedel, and Helley in 1977 for southern San Francisco Bay. The average sedimentation rate over the last 4600 years is estimated to be 0.2 cm/yr for the inner part of the bay. Comparison of early maps with updated versions as well as studies of marsh plant zonations in disturbed and nondisturbed areas shows that almost half of the marsh in Richardson Bay has been leveed or filled since 1899.

Deriving Chesapeake Bay Water Quality Standards

USGS Publications Warehouse

Tango, Peter J.; Batiuk, Richard A.

2013-01-01

Achieving and maintaining the water quality conditions necessary to protect the aquatic living resources of the Chesapeake Bay and its tidal tributaries has required a foundation of quantifiable water quality criteria. Quantitative criteria serve as a critical basis for assessing the attainment of designated uses and measuring progress toward meeting water quality goals of the Chesapeake Bay Program partnership. In 1987, the Chesapeake Bay Program partnership committed to defining the water quality conditions necessary to protect aquatic living resources. Under section 303(c) of the Clean Water Act, States and authorized tribes have the primary responsibility for adopting water quality standards into law or regulation. The Chesapeake Bay Program partnership worked with U.S. Environmental Protection Agency to develop and publish a guidance framework of ambient water quality criteria with designated uses and assessment procedures for dissolved oxygen, water clarity, and chlorophyll a for Chesapeake Bay and its tidal tributaries in 2003. This article reviews the derivation of the water quality criteria, criteria assessment protocols, designated use boundaries, and their refinements published in six addendum documents since 2003 and successfully adopted into each jurisdiction's water quality standards used in developing the Chesapeake Bay Total Maximum Daily Load.

Power System Reliability Assessment by Analysing Voltage Dips on the Blue Horizon Bay 22KV Overhead Line in the Nelson Mandela Bay Municipality

NASA Astrophysics Data System (ADS)

Lamour, B. G.; Harris, R. T.; Roberts, A. G.

2010-06-01

Power system reliability problems are very difficult to solve because the power systems are complex and geographically widely distributed and influenced by numerous unexpected events. It is therefore imperative to employ the most efficient optimization methods in solving the problems relating to reliability of the power system. This paper presents a reliability analysis and study of the power interruptions resulting from severe power outages in the Nelson Mandela Bay Municipality (NMBM), South Africa and includes an overview of the important factors influencing reliability, and methods to improve the reliability. The Blue Horizon Bay 22 kV overhead line, supplying a 6.6 kV residential sector has been selected. It has been established that 70% of the outages, recorded at the source, originate on this feeder.

Water resources planning for rivers draining into Mobile Bay. Part 2: Non-conservative species transport models

NASA Technical Reports Server (NTRS)

April, G. C.; Liu, H. A.

1975-01-01

Total coliform group bacteria were selected to expand the mathematical modeling capabilities of the hydrodynamic and salinity models to understand their relationship to commercial fishing ventures within bay waters and to gain a clear insight into the effect that rivers draining into the bay have on water quality conditions. Parametric observations revealed that temperature factors and river flow rate have a pronounced effect on the concentration profiles, while wind conditions showed only slight effects. An examination of coliform group loading concentrations at constant river flow rates and temperature shows these loading changes have an appreciable influence on total coliform distribution within Mobile Bay.

Chesapeake Bay plume dynamics from LANDSAT

NASA Technical Reports Server (NTRS)

Munday, J. C., Jr.; Fedosh, M. S.

1981-01-01

LANDSAT images with enhancement and density slicing show that the Chesapeake Bay plume usually frequents the Virginia coast south of the Bay mouth. Southwestern (compared to northern) winds spread the plume easterly over a large area. Ebb tide images (compared to flood tide images) show a more dispersed plume. Flooding waters produce high turbidity levels over the shallow northern portion of the Bay mouth.

Analysis of Trends in Fish Assemblages in Narragansett Bay, RI/MA

EPA Science Inventory

Estuarine fish are highly valued resources that are affected by several factors, including climate, landscape, pollution, and fishing pressure. Here, we examine patterns of variability in estuarine fish assemblages in Narragansett Bay, an estuary located in Rhode Island and Mass...

ASTER Images San Francisco Bay Area

NASA Image and Video Library

2000-04-26

This image of the San Francisco Bay region was acquired on March 3, 2000 by the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) on NASA's Terra satellite. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters about 50 to 300 feet ), ASTER will image Earth for the next 6 years to map and monitor the changing surface of our planet. Image: This image covers an area 60 kilometers (37 miles) wide and 75 kilometers (47 miles) long in three bands of the reflected visible and infrared wavelength region. The combination of bands portrays vegetation in red, and urban areas in gray. Sediment in the Suisun Bay, San Pablo Bay, San Francisco Bay, and the Pacific Ocean shows up as lighter shades of blue. Along the west coast of the San Francisco Peninsula, strong surf can be seen as a white fringe along the shoreline. A powerful rip tide is visible extending westward from Daly City into the Pacific Ocean. In the lower right corner, the wetlands of the South San Francisco Bay National Wildlife Refuge appear as large dark blue and brown polygons. The high spatial resolution of ASTER allows fine detail to be observed in the scene. The main bridges of the area (San Mateo, San Francisco-Oakland Bay, Golden Gate, Richmond-San Rafael, Benicia-Martinez, and Carquinez) are easily picked out, connecting the different communities in the Bay area. Shadows of the towers along the Bay Bridge can be seen over the adjacent bay water. With enlargement the entire road network can be easily mapped; individual buildings are visible, including the shadows of the high-rises in downtown San Francisco. Inset: This enlargement of the San Francisco Airport highlights the high spatial resolution of ASTER. With further enlargement and careful examination, airplanes can be seen at the terminals. http://photojournal.jpl.nasa.gov/catalog/PIA02606

Phosphate oxygen isotope ratios as a tracer for sources and cycling of phosphate in North San Francisco Bay, California

USGS Publications Warehouse

McLaughlin, K.; Kendall, C.; Silva, S.R.; Young, M.; Paytan, A.

2006-01-01

A seasonal analysis assesing variations in the oxygen isotopic composition of dissolved inorganic phosphate (DIP) was conducted in the San Francisco Bay estuarine system, California. Isotopic fractionation of oxygen in DIP (exchange of oxygen between phosphate and environmental water) at surface water temperatures occurs only as a result of enzyme-mediated, biological reactions. Accordingly, if phospate demand is low relative to input and phosphate is not heavily cycled in the ecosystem, the oxygen isotopic composition of DIP (?? 18Op) will reflect the isotopic composition of the source of phosphate to the system. Such is the case for the North San Francisco Bay, an anthropogenically impacted estuary with high surface water phosphate concentrations. Variability in the ?? 18Op in the bay is primarily controlled by mixing of water masses with different ??18Op signatures. The ??18Op values range from 11.4??? at the Sacramento River to 20.1??? at the Golden Gate. Deviations from the two-component mixing model for the North Bay reflect additional, local sources of phosphate to the estuary that vary seasonally. Most notably, deviations from the mixing model occur at the confluence of a major river into the bay during periods of high river discharge and near wastewater treatment outlets. These data suggest that ??18Op can be an effective tool for identifying P point sources and understanding phosphate dynamics in estuarine systems. Copyright 2006 by the American Geophysical Union.

Iodine chemistry in the water column of the Chesapeake Bay: Evidence for organic iodine forms

NASA Astrophysics Data System (ADS)

Luther, George W.; Ferdelman, Timothy; Culberson, Charles H.; Kostka, Joel; Wu, Jingfeng

1991-03-01

During the summer of 1987, we collected and analysed Chesapeake Bay water samples for the inorganic iodine species: iodide (by cathodic-stripping squarewave voltammetry) and iodate (by differential pulse polarography); and total iodine (by hypochlorite oxidation of the seawater sample to iodate). The difference between the sum of the inorganic iodine species and the total iodine was significant for about one-third of the samples collected from the Bay. Thus, in these samples, a third (or more) 'new' form(s) of iodine was present. These samples were primarily from oxygen-saturated surface waters of high biological activity (primary productivity and bacterial processes). This 'new' form can make up as much as 70% of the total iodine. Waters containing low oxygen concentrations showed less of this 'new' form of iodine whereas anoxic and sulphidic bottom waters contained only iodide. This 'new' form of iodine is organic in nature and probably non-volatile. It may reside in the peptide and humic fractions. Only reduced iodine (iodide and organic iodine) was detected in waters from the northern section of the Bay, whereas only iodide and iodate were detected in the southern section of the Bay. In only two samples were iodide, iodate and the 'new' form of iodine found to coexist. Iodide and organic iodine are probably cycled in the surface waters of the northern section of the Bay via a combination of biogeochemical and photochemical processes which produce the reactive intermediates, molecular iodine and hypoiodous acid. These react quickly with reduced inorganic and organic compounds to maintain the reduced forms of iodine in the water column. Only total iodine is conservative throughout the estuary. The inorganic iodine forms can be used as geochemical tracers.

Habitat Mapping and Classification of the Grand Bay National Estuarine Research Reserve using AISA Hyperspectral Imagery

NASA Astrophysics Data System (ADS)

Rose, K.

2012-12-01

Habitat mapping and classification provides essential information for land use planning and ecosystem research, monitoring and management. At the Grand Bay National Estuarine Research Reserve (GRDNERR), Mississippi, habitat characterization of the Grand Bay watershed will also be used to develop a decision-support tool for the NERR's managers and state and local partners. Grand Bay NERR habitat units were identified using a combination of remotely sensed imagery, aerial photography and elevation data. Airborne Imaging Spectrometer for Applications (AISA) hyperspectral data, acquired 5 and 6 May 2010, was analyzed and classified using ENVI v4.8 and v5.0 software. The AISA system was configured to return 63 bands of digital imagery data with a spectral range of 400 to 970 nm (VNIR), spectral resolution (bandwidth) at 8.76 nm, and 1 m spatial resolution. Minimum Noise Fraction (MNF) and Inverse Minimum Noise Fraction were applied to the data prior to using Spectral Angle Mapper ([SAM] supervised) and ISODATA (unsupervised) classification techniques. The resulting class image was exported to ArcGIS 10.0 and visually inspected and compared with the original imagery as well as auxiliary datasets to assist in the attribution of habitat characteristics to the spectral classes, including: National Agricultural Imagery Program (NAIP) aerial photography, Jackson County, MS, 2010; USFWS National Wetlands Inventory, 2007; an existing GRDNERR habitat map (2004), SAV (2009) and salt panne (2002-2003) GIS produced by GRDNERR; and USACE lidar topo-bathymetry, 2005. A field survey to validate the map's accuracy will take place during the 2012 summer season. ENVI's Random Sample generator was used to generate GIS points for a ground-truth survey. The broad range of coastal estuarine habitats and geomorphological features- many of which are transitional and vulnerable to environmental stressors- that have been identified within the GRDNERR point to the value of the Reserve for

78 FR 59902 - Regulated Navigation Area; Special Buzzards Bay Vessel Regulation, Buzzards Bay, MA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-30

... DEPARTMENT OF HOMELAND SECURITY Coast Guard 33 CFR Part 165 [Docket No. USCG-2011-0322] RIN 1625-AA11 Regulated Navigation Area; Special Buzzards Bay Vessel Regulation, Buzzards Bay, MA AGENCY: Coast Guard, DHS. ACTION: Notice of extension of comment period. SUMMARY: The Coast Guard is extending the...

19 CFR 7.11 - Guantanamo Bay Naval Station.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 19 Customs Duties 1 2010-04-01 2010-04-01 false Guantanamo Bay Naval Station. 7.11 Section 7.11... TREASURY CUSTOMS RELATIONS WITH INSULAR POSSESSIONS AND GUANTANAMO BAY NAVAL STATION § 7.11 Guantanamo Bay Naval Station. Articles of foreign origin may enter the area (both land and water) of the Guantanamo Bay...

19 CFR 7.11 - Guantanamo Bay Naval Station.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 19 Customs Duties 1 2011-04-01 2011-04-01 false Guantanamo Bay Naval Station. 7.11 Section 7.11... TREASURY CUSTOMS RELATIONS WITH INSULAR POSSESSIONS AND GUANTANAMO BAY NAVAL STATION § 7.11 Guantanamo Bay Naval Station. Articles of foreign origin may enter the area (both land and water) of the Guantanamo Bay...

Estimation of Freshwater Flow to Joe Bay, South Florida.

NASA Astrophysics Data System (ADS)

Zucker, M. A.; Hittle, C. D.

2002-05-01

During the last century, drainage canals were constructed as part of the Central and Southern Flood Control (C&SF) project. Flood control was achieved but degradation to the Everglades ecosystem was evident. Problems related to Florida Bay include sea grass die off, algae blooms, and extreme salinity conditions. Modifications to the C&SF project are proposed as part of the Comprehensive Everglades Restoration Plan (CERP). One objective of CERP is to improve the timing and distribution of freshwater flow within the Everglades ecosystem and to Florida Bay. Several CERP projects propose changes to the existing canal network that borders Everglades National Park (ENP) in southern Miami-Dade County. An examination of flows to Joe Bay, a small embayment on the northeastern shores of Florida Bay, has provided baseline information on current spatial and temporal water deliveries prior to CERP modifications. Understanding the existing complex water delivery system and the effects the system has on Everglades hydrology will provide a necessary benchmark against which to measure restoration success. The study was initiated by the U.S. Geological Survey (USGS) in May 1999 to estimate creek flows to Joe Bay and determine the relative amounts derived from Taylor Slough and overflow from the C-111 Canal. It is important to understand the source of freshwater to Joe Bay before it enters Florida Bay. Taylor Slough transports freshwater to northeastern Florida Bay from the northwest while overflow from the C-111 Canal provides freshwater to northeastern Florida Bay from the northeast. Joe Bay, receives part of the freshwater from each of these sources via sheet flow and small estuarine creeks, and subsequently discharges southward to northeastern Florida Bay via Trout Creek. Trout Creek contributes approximately 50 percent of the total freshwater flow to northeastern Florida Bay (Hittle 2001). Eight non-gaged creeks entering Joe Bay were selected for acoustic Doppler current

Geochemical analysis of sediments from a semi-enclosed bay (Dongshan Bay, southeast China) to determine the anthropogenic impact and source.

PubMed

Xu, Yonghang; Sun, Qinqin; Ye, Xiang; Yin, Xijie; Li, Dongyi; Wang, Liang; Wang, Aijun; Li, Yunhai

2017-05-01

The geochemical compositions of sediments in the Dongshan Bay, a semi-enclosed bay on the southeast coast of China, were obtained to identify pollutant sources and evaluate the anthropogenic impacts over the last 100 years. The results indicated that the metal flux had been increasing since the 1980s. Enrichment factor values (Pb, Zn and Cu) suggested only slight enrichment. The proportion of anthropogenic Pb changed from 9% to 15% during 2000-2014. Coal combustion might be an important contamination source in the Dongshan Bay. The historical variation in the metal flux reflected the economic development and urbanization in the Zhangjiang drainage area in the past 30 years. According to the Landsat satellite remote sensing data, the urbanization area expanded approximately three times from 1995 to 2010. The δ 13 C values (-21‰ to -23‰) of the organic matter (OM) in the sediments indicated that the OM was primarily sourced from aquatic, terrigenous and marsh C 3 plants. Nitrogen was mainly derived from aquatic plants and terrigenous erosion before the 1980s. However, the total organic carbon (TOC) contents, total nitrogen (TN) contents and δ 15 N had been increasing since the 1980s, which suggested that the sources of nitrogen were soil erosion, fertilizer and sewage. In addition, the TOC and TN fluxes in the Dongshan Bay had significantly increased since the 1980s, which reflected the use of N fertilizer. However, the TOC and TN fluxes significantly decreased in the past decade because environmental awareness increased and environmental protection policies were implemented. Copyright © 2017 Elsevier Ltd. All rights reserved.

Comparison of multipoint linkage analyses for quantitative traits in the CEPH data: parametric LOD scores, variance components LOD scores, and Bayes factors.

PubMed

Sung, Yun Ju; Di, Yanming; Fu, Audrey Q; Rothstein, Joseph H; Sieh, Weiva; Tong, Liping; Thompson, Elizabeth A; Wijsman, Ellen M

2007-01-01

We performed multipoint linkage analyses with multiple programs and models for several gene expression traits in the Centre d'Etude du Polymorphisme Humain families. All analyses provided consistent results for both peak location and shape. Variance-components (VC) analysis gave wider peaks and Bayes factors gave fewer peaks. Among programs from the MORGAN package, lm_multiple performed better than lm_markers, resulting in less Markov-chain Monte Carlo (MCMC) variability between runs, and the program lm_twoqtl provided higher LOD scores by also including either a polygenic component or an additional quantitative trait locus.

33 CFR 167.100 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General.

Code of Federal Regulations, 2013 CFR

2013-07-01

... SEPARATION SCHEMES Description of Traffic Separation Schemes and Precautionary Areas § 167.100 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General. The traffic separation scheme in the...

33 CFR 167.100 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General.

Code of Federal Regulations, 2014 CFR

2014-07-01

... SEPARATION SCHEMES Description of Traffic Separation Schemes and Precautionary Areas § 167.100 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General. The traffic separation scheme in the...

33 CFR 167.100 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General.

Code of Federal Regulations, 2011 CFR

2011-07-01

... SEPARATION SCHEMES Description of Traffic Separation Schemes and Precautionary Areas § 167.100 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General. The traffic separation scheme in the...

33 CFR 167.100 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General.

Code of Federal Regulations, 2012 CFR

2012-07-01

... SEPARATION SCHEMES Description of Traffic Separation Schemes and Precautionary Areas § 167.100 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General. The traffic separation scheme in the...

Recent results of Daya Bay reactor neutrino experiment

NASA Astrophysics Data System (ADS)

Leitner, R.; Daya Bay Collaboration

2017-04-01

The Daya Bay reactor neutrino experiment has been designed to precisely measure the least known neutrino mixing angle θ13. In March 2012, Daya Bay collaboration announced [Daya Bay Collaboration (F. P. An et al.), Observation of electron-antineutrino disappearance at Daya Bay, Phys. Rev. Lett. 108 (2012) 171803] the observation of non-zero value of sin2 ⁡ 2θ13. Because of large statistics of detected antineutrinos and excellent performance of the experiment, Daya Bay continuously improves the precision of world best measurement of sin2 ⁡ 2θ13. In addition it provides results on neutrino mass splitting Δ mee2 competitive with measurements of other experiments, results on precise measurement of reactor fluxes and on limits of the existence of hypothetical fourth neutrino. In this paper, we report the results available by the time of the 6th Capri workshop: the measurement of oscillation parameters sin2 ⁡ (2θ13) = 0.084 ± 0.005 and | Δmee2 | = (2.42 ± 0.11) ×10-3eV2 [Daya Bay Collaboration (F. P. An et al.), New Measurement of Antineutrino Oscillation with the Full Detector Configuration at Daya Bay, Phys. Rev. Lett. 115 (2015) no. 11, 111802], searches for sterile neutrinos [Daya Bay Collaboration (F. P. An et al.) Search for a Light Sterile Neutrino at Daya Bay, Phys. Rev. Lett. 113 (2014) 141802] and precise measurement of reactor neutrino flux [Daya Bay Collaboration (F. P. An et al.), Measurement of the Reactor Anti-neutrino Flux and Spectrum at Daya Bay, Phys. Rev. Lett. 116 (2016) no. 6, 061801]. These are based on 621 days of measurement, most of the data has been taken in full detector configuration. More precise results [Daya Bay Collaboration (F. P. An et al.), Measurement of electron antineutrino oscillation based on 1230 days of operation of the Daya Bay experiment, arxiv:arXiv:1610.04802] with 1230 days of operation have been presented few weeks later at the Neutrino 2016 conference.

Evaluation of phytoplankton community composition in the eutrophic Masan Bay by HPLC pigment analysis.

PubMed

Kim, Jeong Bae; Hong, Sokjin; Lee, Won-Chan; Lee, Yong-Woo; Kim, Hyung Chul; Cho, Yoonsik

2015-03-01

To assess the spatiotemporal changes in phytoplankton community composition in relation to the environment of Masan Bay, a semi-enclosed bay on the southern coast of Korea, photosynthetic pigments and environmental variables were analyzed in seawater, every month between March and November 2010. The level of dissolved inorganic nutrients was highest between July and September when the freshwater influx was at its peak, whereas chlorophyll a level was highest in April and August. Phosphate concentration was low in April (average: 0.22 +/- 0.17 microM), indicating the role of phosphate as a growth-limiting factor for phytoplankton. The results of pigment analysis indicate that dinoflagellate blooms occurred under favorable conditions, where competition with diatoms occurred. Fucoxanthin- and chlorophyll b-containing phytoplankton dominated the surface layer of Masan Bay from July to September. The composition of phytoplankton community in Masan Bay changed dramatically each month according to variations in the amount and composition of nutrients introduced through surface runoff.

Tensor Factorization for Precision Medicine in Heart Failure with Preserved Ejection Fraction

PubMed Central

Luo, Yuan; Ahmad, Faraz S.; Shah, Sanjiv J.

2017-01-01

Heart failure with preserved ejection fraction (HFpEF) is a heterogeneous clinical syndrome that may benefit from improved subtyping in order to better characterize its pathophysiology and to develop novel targeted therapies. The United States Precision Medicine Initiative comes amid the rapid growth in quantity and modality of clinical data for HFpEF patients ranging from deep phenotypic to trans-omic data. Tensor factorization, a form of machine learning, allows for the integration of multiple data modalities to derive clinically relevant HFpEF subtypes that may have significant differences in underlying pathophysiology and differential response to therapies. Tensor factorization also allows for better interpretability by supporting dimensionality reduction and identifying latent groups of data for meaningful summarization of both features and disease outcomes. In this narrative review, we analyze the modest literature on the application of tensor factorization to related biomedical fields including genotyping and phenotyping. Based on the cited work including work of our own, we suggest multiple tensor factorization formulations capable of integrating the deep phenotypic and trans-omic modalities of data for HFpEF, or accounting for interactions between genetic variants at different -omic hierarchies. We encourage extensive experimental studies to tackle challenges in applying tensor factorization for precision medicine in HFpEF, including effectively incorporating existing medical knowledge, properly accounting for uncertainty, and efficiently enforcing sparsity for better interpretability. PMID:28116551

New Inlet in Great South Bay: Changes in Circulation Dynamics, Residence Time, and Salt Balance in Response to Low Frequency Forcing from Observations and FCVOM Simulations

NASA Astrophysics Data System (ADS)

Hinrichs, C.; Flagg, C. N.; Wilson, R. E.; Flood, R. D.

2016-02-01

The Great South Bay is a shallow, multi-inlet estuary at the south shore of Long Island. It is sheltered from the Atlantic by its barrier island Fire Island. Sufficient freshwater input in form of river flow, runoff, and groundwater input combined with restricted ocean-bay-exchange through few narrow inlets produce significant horizontal salinity and temperature gradients. A new inlet was cut into Fire Island during Hurricane Sandy in October 2012, and thanks to the ongoing monitoring program observational data is available from before and after Sandy to investigate changes in the bay induced by this new inlet.The data show a persistent increase in salinity in the bay, and residents, fishermen and scientists report decreased turbidity, improved water quality and a healthier ecosystem in the eastern part of bay. Calculation of residence time based on the freshwater fraction method showed a decrease from 25 to ten days for Bellport Bay near the new breach. From tide gauge data we see, that while tidal range in the bay has not increased significantly with the new inlet, water level response to low frequency forcing did. In general, water levels within the bay responds to both coastal Ekman set-up/set-down and to local wind forcing over the bay itself. Data analysis shows that the relative importance of those two drivers did change with the new inlet. In concert with data analysis, the finite element model FVCOM is applied on a high-resolution Great South Bay grid to further investigate changes in salinity distribution, circulation, and bay-ocean volume-exchange induced by the new breach as well as to examine the degree of interaction between the existing inlets and the new breach.

78 FR 39610 - Safety Zone; Big Bay Boom, San Diego Bay; San Diego, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-02

..., Protection of Children from Environmental Health Risks and Safety Risks. This rule is not an economically significant rule and does not create an environmental risk to health or risk to safety that may...-AA00 Safety Zone; Big Bay Boom, San Diego Bay; San Diego, CA AGENCY: Coast Guard, DHS. ACTION...

Petroleum pollution in surface sediments of Daya Bay, South China, revealed by chemical fingerprinting of aliphatic and alicyclic hydrocarbons

NASA Astrophysics Data System (ADS)

Gao, Xuelu; Chen, Shaoyong

2008-10-01

Nine surface sediments collected from Daya Bay have been Soxhlet-extracted with 2:1 (v/v) dichloromethane-methanol. The non-aromatic hydrocarbon (NAH) fraction of solvent extractable organic matter (EOM) and some bulk geochemical parameters have been analyzed to determine petroleum pollution of the bay. The NAH content varies from 32 to 276 μg g -1 (average 104 μg g -1) dry sediment and accounts for 5.8-64.1% (average 41.6%) of the EOM. n-Alkanes with carbon number ranging from 15 to 35 are identified to be derived from both biogenic and petrogenic sources in varying proportions. The contribution of marine authigenic input to the sedimentary n-alkanes is lower than the allochthonous input based on the average n-C 31/ n-C 19 alkane ratio. 25.6-46.5% of the n-alkanes, with a mean of 35.6%, are contributed by vascular plant wax. Results of unresolved complex mixture, isoprenoid hydrocarbons, hopanes and steranes also suggest possible petroleum contamination. There is strong evidence of a common petroleum contamination source in the bay.

STOCHASTIC INTEGRATION FOR TEMPERED FRACTIONAL BROWNIAN MOTION.

PubMed

Meerschaert, Mark M; Sabzikar, Farzad

2014-07-01

Tempered fractional Brownian motion is obtained when the power law kernel in the moving average representation of a fractional Brownian motion is multiplied by an exponential tempering factor. This paper develops the theory of stochastic integrals for tempered fractional Brownian motion. Along the way, we develop some basic results on tempered fractional calculus.

Soils and Vegetation of the Khaipudyr Bay Coast of the Barents Sea

NASA Astrophysics Data System (ADS)

Shamrikova, E. V.; Deneva, S. V.; Panyukov, A. N.; Kubik, O. S.

2018-04-01

Soils and vegetation of the coastal zone of the Khaipudyr Bay of the Barents Sea have been examined and compared with analogous objects in the Karelian coastal zone of the White Sea. The environmental conditions of these two areas are somewhat different: the climate of the Khaipudyr Bay coast is more severe, and the seawater salinity is higher (32-33‰ in the Khaipudyr Bay and 25-26‰ in the White Sea). The soil cover patterns of both regions are highly variable. Salt-affected marsh soils (Tidalic Fluvisols) are widespread. The complicated mesotopography includes high geomorphic positions that are not affected by tidal water. Under these conditions, zonal factors of pedogenesis predominate and lead to the development of Cryic Folic Histosols and Histic Reductaquic Cryosols. On low marshes, the concentrations of soluble Ca2+, K+ + Na+, Cl-, and SO2- 4 ions in the soils of the Khaipudyr Bay coast are two to four times higher than those in the analogous soils of Karelian coast. Cluster analysis of a number of soil characteristics allows separation of three soils groups: soils of low marshes, soils of middle-high marshes, and soils of higher positions developing under the impact of zonal factors together with the aerial transfer and deposition of seawater drops. The corresponding plant communities are represented by coastal sedge cenoses, forb-grassy halophytic cenoses, and zonal cenoses of hypoarctic tundra. It is argued that the grouping of marsh soils in the new substantivegenetic classification system of Russian soils requires further elaboration.

Experimental determination of the Mo isotope fractionation factor between metal and silicate liquids

NASA Astrophysics Data System (ADS)

Hin, R. C.; Burkhardt, C.; Schmidt, M. W.; Bourdon, B.

2011-12-01

before chemical purification. Initial results provide an equilibrium 98Mo/95Mo isotope fractionation factor between metal and silicate liquids of -0.18±0.10% (2σ) at 1400°C and 1 GPa. Although the relative mass difference of these Mo isotopes is smaller than for Fe isotopes, this result implies that metal-silicate segregation may have led to mass-dependent stable Mo isotope fractionation, as opposed to Fe isotopes. A possible explanation is that the bonding environment of Mo may counterbalance its relatively small mass separation. At reducing conditions, Mo occurs in 4+ valence state in silicates [4] and thus its bond strength difference between metal and silicate may be more similar to that of Si than Fe. Stable Mo isotopes may thus become an important tool for constraining the conditions of core formation in asteroids and terrestrial planets. [1] Rubie et al. (2011) EPSL 301, 31-42. [2] Shahar et al. (2009) EPSL 288, 228-234. [3] Poitrasson et al. (2009) EPSL 278, 376-385. [4] Farges et al. (2006) Can. Min. 44, 731-753.

The bay area wildfire forum

Treesearch

Todd E. Bruce

1995-01-01

Fire agencies throughout the San Francisco Bay Area formed a grassroots organization to influence a firesafe environment. The Bay Area Wildfire Forum (BAWF) was organized in 1992 to coordinate wildland fire training while promoting and encouraging further activities regarding wildland firefighting and fire prevention.

Sources and historical record of tin and butyl-tin species in a Mediterranean bay (Toulon Bay, France).

PubMed

Pougnet, Frédérique; Schäfer, Jörg; Dutruch, Lionel; Garnier, Cédric; Tessier, Erwan; Dang, Duc Huy; Lanceleur, Laurent; Mullot, Jean-Ulrich; Lenoble, Véronique; Blanc, Gérard

2014-05-01

Concentrations of inorganic tin (Sn(inorg)), tributyltin (TBT) and its degradation products dibutyltin (DBT) and monobutyltin (MBT) were measured in surface sediments and in two cores from the Toulon Bay, hosting the major French military harbour. Anticipating planned dredging, the aim of the present work is to map and evaluate for the first time the recent and historic contamination of these sediments by inorganic and organic Sn species derived from antifouling paints used for various naval domains including military, trade, tourism and leisure. Tin and butyl-Sn concentrations in the bay varied strongly (4 orders of magnitude), depending on the site, showing maximum values near the shipyards. The concentrations of total Sn (1.3-112 μg g(-1)), TBT (<0.5-2,700 ng g(-1)), DBT (<0.5-1,800 ng g(-1)) and MBT (0.5-1,000 ng g(-1)) generally decreased towards the open sea, i.e. as a function of both distance from the presumed main source and bottom currents. Progressive degradation state of the butyl-Sn species according to the same spatial scheme and the enrichment factors support the scenario of a strongly polluted bay with exportation of polluted sediment to the open Mediterranean. Low degradation and the historical records of butyl-Sn species in two (210)Pb-dated sediment cores, representative of the Northern Bay, are consistent with the relatively recent use of TBT by military shipyards and confirm maximum pollution during the 1970s, which will persist in the anoxic sediments for several centuries. The results show that (a) degradation kinetics of butyl-Sn species depend on environmental conditions, (b) the final degradation product Sn(inorgBT) is by far the dominant species after 10-12 half-life periods and (c) using recent data to reliably assess former TBT contamination requires the use of a modified butyl-Sn degradation index BDI(mod). Resuspension of extremely contaminated subsurface sediments by the scheduled dredging will probably result in mobilization of

Biodiversity inventories and conservation of the marine fishes of Bootless Bay, Papua New Guinea

PubMed Central

2012-01-01

Background The effective management and conservation of biodiversity is predicated on clearly defined conservation targets. Species number is frequently used as a metric for conservation prioritization and monitoring changes in ecosystem health. We conducted a series of synoptic surveys focusing on the fishes of the Bootless Bay region of Papua New Guinea to generate a checklist of fishes of the region. Bootless Bay lies directly south of Port Moresby, the capital of Papua New Guinea, and experiences the highest human population density of any marine area in the country. Our checklist will set a baseline against which future environmental changes can be tracked. Results We generated a checklist of 488 fish species in 72 families found in Bootless Bay during a two-week sampling effort. Using incident-based methods of species estimation, we extrapolate there to be approximately 940 fish species in Bootless Bay, one of the lowest reported numbers in Papua New Guinea. Conclusions Our data suggest that the Bootless Bay ecosystem of Papua New Guinea, while diverse in absolute terms, has lower fish biodiversity compared to other shallow marine areas within the country. These differences in faunal diversity are most likely a combination of unequal sampling effort as well as biophysical factors within Bootless Bay compounded by historical and/or contemporary anthropogenic disturbances. PMID:22849436

Bayes and the Law.

PubMed

Fenton, Norman; Neil, Martin; Berger, Daniel

2016-06-01

Although the last forty years has seen considerable growth in the use of statistics in legal proceedings, it is primarily classical statistical methods rather than Bayesian methods that have been used. Yet the Bayesian approach avoids many of the problems of classical statistics and is also well suited to a broader range of problems. This paper reviews the potential and actual use of Bayes in the law and explains the main reasons for its lack of impact on legal practice. These include misconceptions by the legal community about Bayes' theorem, over-reliance on the use of the likelihood ratio and the lack of adoption of modern computational methods. We argue that Bayesian Networks (BNs), which automatically produce the necessary Bayesian calculations, provide an opportunity to address most concerns about using Bayes in the law.

Learning on the Big Bay

ERIC Educational Resources Information Center

Philp, Michael J.

1978-01-01

Anne Arundel Community College uses the Chesapeake Bay for a flexible ocean engineering technology program which includes mechanical, electrical, and environmental options for transfer and/or vocational students, and adult education programs covering such subjects as sailing, Bay history, boat building, scuba-diving, and marine biology. (RT)

Tracking of Nuclear Cable Insulation Polymer Structural Changes using the Gel Fraction and Uptake Factor Method

DOE Office of Scientific and Technical Information (OSTI.GOV)

Correa, Miguel; Huang, Qian; Fifield, Leonard S.

Cross-linked polyethylene (XLPE) cable insulation samples were exposed to heat and gamma radiation at a series of temperatures, dose rates, and exposure times to evaluate the effects of these variables on material degradation. The samples were tested using the solvent incubation method to collect gel fraction and uptake factor data in order to assess the crosslinking and chain scission occurring in polymer samples with aging. Consistent with previous reports, gel fraction values were observed to increase and uptake factor values to decrease with radiation and thermal exposure. The trends seen were also more prominent as exposure time increased, suggesting thismore » to be a viable method of tracking structural changes in the XLPE-insulated cable material over extended periods. For the conditions explored, the cable insulation material evaluated did not indicate signs of anomalous aging such as inverse temperature effect in which radiation-induced aging is more severe at lower temperature. Ongoing aging under identical radiation conditions and at lower temperature will further inform conclusions regarding the importance of inverse temperature effects for this material under these conditions.« less

BOOK REVIEW OF "CHESAPEAKE BAY BLUES: SCIENCE, POLITICS, AND THE STRUGGLE TO SAVE THE BAY"

EPA Science Inventory

This is a book review of "Chesapeake Bay Blues: Science, Politics, and the Struggle to Save the Bay". This book is very well written and provides an easily understandable description of the political challenges faced by those proposing new or more stringent environmental regulat...

Latest results from Daya Bay

NASA Astrophysics Data System (ADS)

Vorobel, Vit; Daya Bay Collaboration

2017-07-01

The Daya Bay Reactor Neutrino Experiment was designed to measure θ 13, the smallest mixing angle in the three-neutrino mixing framework, with unprecedented precision. The experiment consists of eight functionally identical detectors placed underground at different baselines from three pairs of nuclear reactors in South China. Since Dec. 2011, the experiment has been running stably for more than 4 years, and has collected the largest reactor anti-neutrino sample to date. Daya Bay is able to greatly improve the precision on θ 13 and to make an independent measurement of the effective mass splitting in the electron antineutrino disappearance channel. Daya Bay can also perform a number of other precise measurements, such as a high-statistics determination of the absolute reactor antineutrino flux and spectrum, as well as a search for sterile neutrino mixing, among others. The most recent results from Daya Bay are discussed in this paper, as well as the current status and future prospects of the experiment.

Pollution of HCHs, DDTs and PCBs in tidal flat of Hangzhou Bay 2009-2013

NASA Astrophysics Data System (ADS)

Zhao, Peng; Gong, Wenjie; Mao, Guohua; Li, Jige; Xu, Fenfen; Shi, Jiawei

2016-05-01

The concentration and distribution of three persistent organic pollutants (hexachlorocyclohexanes (HCHs), dichlorodiphenyltrichloroethanes (DDTs) and polychlorinated biphenyls (PCBs)) was assessed in tidal flat sediments collected from the south bank of Hangzhou Bay, China from 2009 to 2013. Gas chromatography coupled to triple quadrupole mass spectrometry (GC-MS/MS) was used for analysis, based on United States Environmental Protection Agency methods EPA8080A, EPA8081B, and EPA3550B. The results showed that the levels of HCHs, DDTs and PCBs decreased in the order of DDTs < HCHs < PCBs, and their mass fractions ranged from 0.29-32.91, 0.09-13.19 and 0.16-4.10 μg/kg (dry mass), respectively. The levels of HCHs, DDTs and PCBs decreased slowly from 2009 to 2013, with considerably greater concentrations in winter than in spring and summer. In this study area, the concentrations of DDTs and HCHs decreased gradually towards the mouth of Hangzhou Bay, while the concentrations of PCBs were related to changes in the local economy. In addition, the sources of HCHs and DDTs were identified as atmospheric precipitation and historical residues. Finally, we predicted that PCBs pollution primarily originated from Aroclor 1254(Lot A4), which might root in the illegal demolition and stacking of abandoned paint, transformer or electronic equipment in the south bank of Hangzhou Bay.

THEORETICAL AND EXPERIMENTAL ASPECTS OF ISOTOPIC FRACTIONATION.

USGS Publications Warehouse

O'Neil, James R.

1986-01-01

Essential to the interpretation of natural variations of light stable isotope ratios is knowledge of the magnitude and temperature dependence of isotopic fractionation factors between the common minerals and fluids. These fractionation factors are obtained in three ways: (1) Semi-empirical calculations using spectroscopic data and the methods of statistical mechanics. (2) Laboratory calibration studies. (3) Measurements of natural samples whose formation conditions are well-known or highly constrained. In this chapter methods (1) and (2) are evaluated and a review is given of the present state of knowledge of the theory of isotopic fractionation and the fraction that influence the isotopic properties of minerals.

The IKK Inhibitor Bay 11-7082 Induces Cell Death Independent from Inhibition of Activation of NFκB Transcription Factors

PubMed Central

Rauert-Wunderlich, Hilka; Siegmund, Daniela; Maier, Eduard; Giner, Tina; Bargou, Ralf C.; Wajant, Harald; Stühmer, Thorsten

2013-01-01

Multiple myeloma (MM) displays an NFκB activity-related gene expression signature and about 20% of primary MM samples harbor genetic alterations conducive to intrinsic NFκB signaling activation. The relevance of blocking the classical versus the alternative NFκB signaling pathway and the molecular execution mechanisms involved, however, are still poorly understood. Here, we comparatively tested NFκB activity abrogation through TPCA-1 (an IKK2 inhibitor), BAY 11-7082 (an IKK inhibitor poorly selective for IKK1 and IKK2), and MLN4924 (an NEDD8 activating enzyme (NAE)-inhibitor), and analyzed their anti-MM activity. Whereas TPCA-1 interfered selectively with activation of the classical NFκB pathway, the other two compounds inhibited classical and alternative NFκB signaling without significant discrimination. Noteworthy, whereas TPCA-1 and MLN4924 elicited rather mild anti-MM effects with slight to moderate cell death induction after 1 day BAY 11-7082 was uniformly highly toxic to MM cell lines and primary MM cells. Treatment with BAY 11-7082 induced rapid cell swelling and its initial effects were blocked by necrostatin-1 or the ROS scavenger BHA, but a lasting protective effect was not achieved even with additional blockade of caspases. Because MLN4924 inhibits the alternative NFκB pathway downstream of IKK1 at the level of p100 processing, the quite discordant effects between MLN4924 and BAY 11-7082 must thus be due to blockade of IKK1-mediated NFκB-independent necrosis-inhibitory functions or represent an off-target effect of BAY 11-7082. In accordance with the latter, we further observed that concomitant knockdown of IKK1 and IKK2 did not have any major short-term adverse effect on the viability of MM cells. PMID:23527154

Assessing past and present P Retention in Sediments in Lake Ontario (Bay of Quinte) by Reaction-Transport Diagenetic Modeling

NASA Astrophysics Data System (ADS)

Doan, Phuong; Berry, Sandra; Markovic, Stefan; Watson, Sue; Mugalingam, Shan; Dittrich, Maria

2016-04-01

Phosphorus (P) is an important macronutrient that can limit aquatic primary production and the risk of harmful algal blooms. Although there is considerable evidence that P release from sediments can represent a significant source of P and burial in sediments returns P to the geological sink; these processes have been poorly characterised. In this study, we applied a non-steady state reactive transport diagenetic model to gain insights into the dynamics of phosphorus binding forms in sediments and the phosphorus cycling of the Bay of Quinte, an embayment of Lake Ontario, Canada. The three basins of the bay (Belleville, Hay Bay and Napanee) that we investigated had differences in their phosphorus binding forms and phosphorus release, reflecting the distinct spatial temporal patterns of land use and urbanization levels in the watershed. Sediment cores from the three stations were collected during summer and under ice cover in 2013-14. Oxygen, pH and redox potential were monitored by microsensors; porewater and sediment solid matter were analyzed for P content, and a sequential extraction was used to analyze P binding forms. In the reaction-transport model, total phosphorus was divided into adsorbed phosphorus, phosphorus bound with aluminium, organic phosphorus, redox sensitive and apatite phosphorus. Using the fluxes of organic and inorganic matter as dynamic boundary conditions, we simulated the depth profiles of solute and solid components. The model closely reproduced the fractionation data of phosphorus binding forms and soluble reactive phosphorus. The past and present P fluxes were calculated and estimated; they related to geochemical conditions, and P binding forms in sediments. Our results show that P release from sediments is dominated by the redox-sentive P fraction accounting for higher percentage at Napanee station. The main P binding form that can be immobilized through diagenesis is apatite P contributing highest P retention at HayBay station. The mass

Status and Assessment of Chesapeake Bay Wildlife Contamination

USGS Publications Warehouse

Heinz, G.H.; Wiemeyer, Stanley N.; Clark, D.R.; Albers, P.H.; Henry, P.; Batiuk, R.A.

1992-01-01

As an integral component of its priority setting process, the Chesapeake Bay Program`s Toxics Subcommittee has sought the expertise of Chesapeake Bay researchers and managers in developing a series of Chesapeake Bay toxics status and assessment papers. In the report, evidence for historical and current contaminant effects on key bird species, mammals, reptiles and amphibians which inhabit the Chesapeake Bay basin is examined. For each group of wildlife species, a general overview of effects caused by specific toxic substances is followed by detailed accounts of contaminant effects on selected species. Sponsored by Environmental Protection Agency, Annapolis, MD. Chesapeake Bay Program.

The World's Students in Bay Area Universities.

ERIC Educational Resources Information Center

Duggan, Susan J.; Wollitzer, Peter A.

Results of a survey of international student exchange programs in the Bay Area of California are presented. Information is provided on the following: the top 10 countries of origin for Bay Area foreign students; 10 Bay Area institutions with the highest number of foreign students; 10 area institutions with the highest percent of full-time…

Improving source identification of Atlanta aerosol using temperature resolved carbon fractions in positive matrix factorization

NASA Astrophysics Data System (ADS)

Kim, Eugene; Hopke, Philip K.; Edgerton, Eric S.

Daily integrated PM 2.5 (particulate matter ⩽2.5 μm in aerodynamic diameter) composition data including eight individual carbon fractions collected at the Jefferson Street monitoring site in Atlanta were analyzed with positive matrix factorization (PMF). Particulate carbon was analyzed using the thermal optical reflectance method that divides carbon into four organic carbon (OC), pyrolized organic carbon (OP), and three elemental carbon (EC) fractions. A total of 529 samples and 28 variables were measured between August 1998 and August 2000. PMF identified 11 sources in this study: sulfate-rich secondary aerosol I (50%), on-road diesel emissions (11%), nitrate-rich secondary aerosol (9%), wood smoke (7%), gasoline vehicle (6%), sulfate-rich secondary aerosol II (6%), metal processing (3%), airborne soil (3%), railroad traffic (3%), cement kiln/carbon-rich (2%), and bus maintenance facility/highway traffic (2%). Differences from previous studies using only the traditional OC and EC data (J. Air Waste Manag. Assoc. 53(2003a)731; Atmos Environ. (2003b)) include four traffic-related combustion sources (gasoline vehicle, on-road diesel, railroad, and bus maintenance facility) containing carbon fractions whose abundances were different between the various sources. This study indicates that the temperature resolved fractional carbon data can be utilized to enhance source apportionment study, especially with respect to the separation of diesel emissions from gasoline vehicle sources. Conditional probability functions using surface wind data and identified source contributions aid the identifications of local point sources.

Sea otter studies in Glacier Bay National Park and Preserve: annual report 2002

USGS Publications Warehouse

Bodkin, James L.; Kloecker, Kimberly A.; Esslinger, George G.; Monson, Daniel H.; Coletti, Heather A.; Doherty, Janet

2003-01-01

Glacier Bay prior to occupation and foraging by sea otters. Port Althorp sites were chosen to achieve a representative sample of subtidal clam beds already under prolonged foraging pressure by sea otters. There was no direct evidence of otter foraging at any of our Glacier Bay sampling sites. In Glacier Bay, we sampled 15,338 bivalves (average of 1,180/site) representing 14 species of clam, 2 species of mussel, and a single scallop and we sampled 6,917 urchins (average of 513/site). In Port Althorp, we sampled 1,034 bivalves (average of 207/site) representing 14 species of clam. We found only 5 urchins, all S. droebachiensis. Mean densities and biomass of all subtidal clams were significantly greater in Glacier Bay (59.2 and 99/0.25m2 compared to Port Althorp (10.3 and 5.8/0.25m2 (p Our contrasts of subtidal clam populations between Glacier Bay and Port Althorp suggest that clam densities will likely decline by about a factor of six and that clam biomass estimates will decline by more than a factor of ten. Numerically dominant species of clams, P. staminea, S. gigantea, Macoma sp. and Mya sp. were all significantly greater in density and biomass in Glacier Bay, while C. nutalli density was low but significantly higher in Port Althorp. Subtidal clam species diversity was significantly greater in Port Althorp compared to Glacier Bay, although this may simply reflect habitat differences. Sea urchin densities were high in Glacier Bay, while in Port Althorp urchins were virtually absent. Sea otters are now well established in limited areas of the lower portions of Glacier Bay. It is likely that distribution and numbers of sea otters will continue to increase in Glacier Bay in the near future. Glacier Bay supports large and diverse populations of clams that are largely unexploited by sea otters at present. It is predictable that the density and sizes of clam populations will decline in response to otter predation. This will result in fewer opportunities for human harvest, but

Selenium bioaccumulation and body condition in shorebirds and terns breeding in San Francisco Bay, California, USA

USGS Publications Warehouse

Ackerman, Joshua T.; Eagles-Smith, Collin A.

2009-01-01

The present study evaluated Se bioaccumulation in four waterbird species (n = 206 birds) that breed within San Francisco Bay, California, USA: American avocets (Recurvirostra americana), black-necked stilts (Himantopus mexicanus), Forster's terns (Sterna forsteri), and Caspian terns (Hydroprogne caspia). Selenium concentrations were variable and influenced by several factors, including species, region, reproductive stage, age, and sex. Adult Se concentrations (μg/g dry wt) in livers ranged from 3.07 to 48.70 in avocets (geometric mean ± standard error, 7.92 ± 0.64), 2.28 to 41.10 in stilts (5.29 ± 0.38), 3.73 to 14.50 in Forster's terns (7.13 ± 0.38), and 4.77 to 14.40 in Caspian terns (6.73 ± 0.78). Avocets had higher Se concentrations in the North Bay compared to the South Bay, whereas stilt Se concentrations were similar between these regions and Forster's terns had lower Se concentrations in the North Bay compared to the South Bay. Female avocets had higher Se concentrations than male avocets, but this was not the case for stilts and Forster's terns. Of the factors assessed, reproductive stage had the most consistent effect among species. Prebreeding birds tended to have higher liver Se concentrations than breeding birds, but this trend was statistically significant only for Forster's terns. Forster's tern chicks had lower Se concentrations than Forster's tern adults, whereas avocet and stilt adults and chicks were similar. Additionally, body condition was negatively related to liver Se concentrations in Forster's tern adults but not in avocet, stilt, or Caspian tern adults and chicks. These variable results illustrate the complexity of Se bioaccumulation and highlight the need to sample multiple species and examine several factors to assess the impact of Se on wildlife.

Status of coral reef species at Chabahar Bay, Sistan and Baluchistan, Iran.

PubMed

Teymour, Rad A; Sanjani, M S

2010-04-15

This study was carried out in the coral growing zone at Chabahar Bay where it located at 25 degrees 17' N and 60 degrees 36'E. It is called horseshoe Bay, because of its semicircle shape. Some destroyer factors have been affected on the health of coral reefs in Chabahar Bay. Port constructions, dredging operations, spearfishing, anchorages and scuba diving activities were distinguished as the most important problems of coral reef in Chabahar Bay. This study was conducted in order to access Semi-Qualitative Indexes of corals in different areas of Chabahar Bay. Five stations were chosen in east and north part of the Bay, where the most construction activities happened. Rectangular Transect and CoralWatch Racket were used to determine the status of the corals. During study, two classes of Hexacoralia and Octocoralia with 15 families were recorded. Twenty one species of hard coral and 10 species of soft coral were recorded. Hexacoralia was recorded the higher number of family with 10 families and 21 species and Octocoralia was recorded the lower with 5 families and 10 species. Hard corals were dominant. The ranges of qualitative indexes showed, of five stations, three of them (stations 2, 4, 5) showed Good Development and two stations (stations 1, 3) showed Fair Development. For the Condition Index, two stations showed Good Condition (stations 1, 5) and two stations showed Fair Condition (stations 2, 3). Only station 4 showed Poor Condition. The ranges of the Succession Index Showed, four stations (stations 1, 2, 3, 4) were in Very poor Succession and one station (stations 5) showed Poor Succession.

Role of remote sensing in Bay measurements

NASA Technical Reports Server (NTRS)

Mugler, J. P., Jr.; Godfrey, J. P.; Hickman, G. D.; Hovis, W. G.; Pearson, A. O.; Weaver, K. N.

1978-01-01

Remote measurements of a number of surface or near surface parameters for baseline definition and specialized studies, remote measurements of episodic events, and remote measurements of the Bay lithosphere are considered in terms of characterizing and understanding the ecology of the Chesapeake Bay. Geologic processes and features best suited for information enhancement by remote sensing methods are identified. These include: (1) rates of sedimentation in the Bay; (2) rates of erosion of Bay shorelines; (3) spatial distribution and geometry of aquifers; (4) mapping of Karst terrain (sinkholes); and (5) mapping of fracture patterns. Recommendations for studying problem areas identified are given.

Linear dimension reduction and Bayes classification

NASA Technical Reports Server (NTRS)

Decell, H. P., Jr.; Odell, P. L.; Coberly, W. A.

1978-01-01

An explicit expression for a compression matrix T of smallest possible left dimension K consistent with preserving the n variate normal Bayes assignment of X to a given one of a finite number of populations and the K variate Bayes assignment of TX to that population was developed. The Bayes population assignment of X and TX were shown to be equivalent for a compression matrix T explicitly calculated as a function of the means and covariances of the given populations.

Gulf of Mexico integrated science - Tampa Bay study, the impact of groundwater and contaminants on Tampa Bay

USGS Publications Warehouse

Swarzenski, Peter W.

2005-01-01

Despite the recreational and economic value of coastal bays and estuaries, these ecosystems are often among our most 'troubled' natural environments. Urbanization, agriculture, mining, and shipping are just a few activities that can have a profound and lasting impact on the coastal zone. In order to maintain a healthy coastal ecosystem, it is crucial to develop reasonable management practices around expert scientific information. We still have much to learn about the quantity and quality of groundwater being discharged into Tampa Bay, Florida. We also need to improve our knowledge of a wide range of contaminants entering the bay and must be able to determine where they accumulate in seafloor sediments. Such buried contaminants can potentially be harmful to biota if they are released to the water column. U.S. Geological Survey (USGS) scientists and research partners from the University of South Florida (USF), the University of Florida (UF), and the Florida Marine Research Institute (FMRI) are mapping sources of groundwater, measuring groundwater flow into Tampa Bay, and assessing the impact of contaminants and sediments on bay water quality and ecosystem health.

The role of transforming growth factor β1 in fractional laser resurfacing with a carbon dioxide laser.

PubMed

Jiang, Xia; Ge, Hongmei; Zhou, Chuanqing; Chai, Xinyu; Deng, Hui

2014-03-01

The aim of this study was to investigate the role of transforming growth factor β1 in mechanisms of cutaneous remodeling induced by fractional carbon dioxide laser treatment. The dorsal skin of Kunming mice was exposed to a single-pass fractional CO2 laser treatment. Biopsies were taken at 1 h and at 1, 3, 7, 14, 21, 28, and 56 days after treatment. Transforming growth factor (TGF) β1 expression in skin samples was evaluated by ELISA, dermal thickness by hematoxylin-eosin staining, collagen and elastic fibers by Ponceau S and Victoria blue double staining, and types I and III collagens by ELISA. The level of TGF β1 in the laser-treated areas of skin was significantly increased compared with that in the control areas on days 1 (p < 0.05), 3 (p < 0.01), and 7 (p < 0.05) and then decreased by day 14 after treatment, at which time it had returned to the baseline level. Dermal thickness and the amount of type I collagen of the skin of the laser-treated areas had increased significantly (p < 0.05) compared with that in control areas on days 28 and 56. Fibroblast proliferation showed a positive correlation with TGF β1 expression during the early stages (r = 0.789, p < 0.01), and there was a negative correlation between the level of TGF β1 and type I collagen in the late stages, after laser treatment (r = -0.546, p < 0.05). TGF β1 appears to be an important factor in fractional laser resurfacing.

Biofuels and the bay: Characterizing health and ecosystem impacts in the Chesapeake

EPA Science Inventory

The global climate crisis has stimulated the search for alternative fuels. Biofuels have been the focus of a recent report by the Chesapeake Bay Commission that evaluated alternative fuel development efforts in the local area. Already under stress from anthropomorphic factors,...

Factors affecting the presence of dissolved glutathione in estuarine waters.

PubMed

Tang, Degui; Shafer, Martin M; Karner, Dawn A; Overdier, Joel; Armstrong, David E

2004-08-15

We investigated factors influencing the presence of the thiol glutathione (GSH) in estuarine waters. Our study addressed thiol phase-association, the biological release from algal cultures, and the role of copper in both thiol release and preservation. Our measurements in three diverse estuaries in the continental United States (San Diego Bay, Cape Fear Estuary, and Norfolk Estuary) show that dissolved GSH, present at sub-nanomolar levels, is preferentially partitioned into the ultra-filtrate fraction (<1 kDa) in comparison with dissolved organic carbon (DOC). Concentrations of GSH generally increased with increases in total copper (Cu)levels, although large variability was observed among estuaries. In 30-h exposure experiments, release of dissolved GSH from the diatom Thalassiosira weissflogii into organic ligand-free experimental media was a strong function of added Cu concentration. The released GSH increased from about 0.02 to 0.27 fmol/cell as Cu was increased from the background level (0.5 nM) to 310 nM in the modified Aquil media. However, excretion of GSH was lower (up to 0.13 fmol/cell) when cells were grown in surface waters of San Diego Bay, despite much higher total Cu concentrations. Experiments conducted in-situ in San Diego Bay water indicated that high concentrations of added Cu destabilized GSH, while both Mn(II) and natural colloids promoted GSH stability. In contrast, laboratory experiments in synthetic media indicated that moderate levels of added Cu enhanced GSH stability.

Clew Bay, Ireland

NASA Image and Video Library

2016-07-26

Clew Bay is in County Mayo, Republic of Ireland. It contains Ireland's best example of sunken glacial drumlins. Clew Bay is associated with Grace O'Malley, the Pirate Queen during Elizabethan times; and Dorinish, a private island purchased by John Lennon. The drumlins are low hills formed from glacial sediment deposited at the end of the last Ice Age. The image was acquired May 31, 2016, covers an area of 22.5 by 26.2 km, and is located at 53.9 degrees north, 9.6 degrees west. http://photojournal.jpl.nasa.gov/catalog/PIA18670

East Bay Municipal Utility District Settlement

EPA Pesticide Factsheets

The East Bay Municipal Utility District and its seven member communities own and operate a separate sanitary sewer system, which serves approximately 650,000 customers on the eastern side of San Francisco Bay in California.

10. VIEW TO NORTHEAST FROM WITHIN SOUTHWEST BAY, LOOKING THROUGH ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

10. VIEW TO NORTHEAST FROM WITHIN SOUTHWEST BAY, LOOKING THROUGH CENTER BAY AND INTO NORTHEAST BAY. NOTE TRAVELING BRIDGE CRANE OVERHEAD AND SWINGING BOOM CRANES ATTACHED TO COLUMNS ON RIGHT AND LEFT. NOTE ALSO THE DIFFERENCE IN TRUSSES SUPPORTING CRANEWAY TRACKS FOR SIDE BAYS AND CENTER BAY. TRUSSES SUPPORTING CRANEWAY TRACKS IN SIDE BAYS (CENTER FOREGROUND AND FAR BACKGROUND) ARE HOWE TRUSSES WITH WOOD DIAGONALS AND STEEL VERTICALS. TRUSSES SUPPORTING CRANEWAY TRACKS IN CENTER BAY (MID BACKGROUND) ARE PRATT TRUSSES WITH WOOD VERTICALS AND DIAGONALS. - Rosie the Riveter National Historical Park, Auxiliary Plate Shop, 912 Harbour Way, Richmond, Contra Costa County, CA

78 FR 55216 - Safety Zone: Suisun Bay Electromagnetic Scan and Ordnance Recovery, Suisun Bay, Concord, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-10

...-AA00 Safety Zone: Suisun Bay Electromagnetic Scan and Ordnance Recovery, Suisun Bay, Concord, CA AGENCY... (MOTCO) electromagnetic scan and ordnance recovery operations. These safety zones are established to... 10, 2013 that they intend to conduct an intrusive electromagnetic scan and ordnance recovery...

Comparison of multipoint linkage analyses for quantitative traits in the CEPH data: parametric LOD scores, variance components LOD scores, and Bayes factors

PubMed Central

Sung, Yun Ju; Di, Yanming; Fu, Audrey Q; Rothstein, Joseph H; Sieh, Weiva; Tong, Liping; Thompson, Elizabeth A; Wijsman, Ellen M

2007-01-01

We performed multipoint linkage analyses with multiple programs and models for several gene expression traits in the Centre d'Etude du Polymorphisme Humain families. All analyses provided consistent results for both peak location and shape. Variance-components (VC) analysis gave wider peaks and Bayes factors gave fewer peaks. Among programs from the MORGAN package, lm_multiple performed better than lm_markers, resulting in less Markov-chain Monte Carlo (MCMC) variability between runs, and the program lm_twoqtl provided higher LOD scores by also including either a polygenic component or an additional quantitative trait locus. PMID:18466597

Pollution risk assessment of oil spill accidents in Garorim Bay of Korea.

PubMed

Lee, Moonjin; Jung, Jung-Yeul

2015-11-15

This study presents a model to assess the oil spill risk in Garorim Bay in Korea, where large-scale oil spill accidents frequently occur. The oil spill risk assessment is carried out by using two factors: 1) The impact probability of the oil spill, and 2) the first impact time of the oil that has been spilt. The risk assessment is conducted for environmentally sensitive areas, such as the coastline and aquaculture farms in the Garorim Bay area. Finally, Garorim Bay is divided into six subareas, and the risks of each subarea are compared with one another to identify the subarea that is most vulnerable to an oil spill accident. These results represent an objective and comprehensive oil spill risk level for a specific region. The prediction of the oil spill spread is based on real-time sea conditions and can be improved by integrating our results, especially when sea conditions are rapidly changing. Copyright © 2015 Elsevier Ltd. All rights reserved.

GIS-based health assessment of the marine ecosystem in Laizhou Bay, China.

PubMed

Song, Debin; Gao, Zhiqiang; Zhang, Hua; Xu, Fuxiang; Zheng, Xiangyu; Ai, Jinquan; Hu, Xiaoke; Huang, Guopei; Zhang, Haibo

2017-12-15

According to 2014-2016 monitoring data, an assessment index system including water quality, depositional environment and ecosystem was built to evaluate the health statue of marine ecosystem in the Laizhou Bay using analytic hierarchy process (AHP) method. The results, spatialized in ArcGIS software, show: while the comprehensive ecological health index is 0.62, the ecological environmental quality in the Laizhou Bay is in a sub-healthy state; the unhealthy area is mainly concentrated in southwestern inshore region, and impacted by serious environmental problems, such as water eutrophication and heavy metal pollution; the northwestern and southeastern inshore regions are in a sub-healthy state, while the eastern inshore and northern areas are in the healthiest state. The land-based pollutants that discharge into the sea may be the leading factors that are causing ecological environment deterioration in the Laizhou Bay, and the reclamation work ongoing around the port has exacerbated the ecological risk. Copyright © 2017 Elsevier Ltd. All rights reserved.

Human and riverine impacts on the dynamics of seawater nutrient and carbon parameters in Kwangyang Bay, South Korea

NASA Astrophysics Data System (ADS)

Kim, Tae-Wook; Kim, Dongseon; Baek, Seung Ho; Kim, Young Ok

2015-04-01

We investigated seawater nutrient and carbon parameters in Kwangyang Bay, South Korea, which has been exposed to significant human influences, in each core month of four seasons for between 2010 and 2012. The survey data were analyzed using multivariate statistics analysis (cluster and factor analysis). As a result, we found that the Seomjin River (the fifth largest river in South Korea) and biological activity, including phytoplankton photosynthesis and bacterial decomposition, were the main factors determining the overall water quality of the bay. However, the impacts of these factors varied both spatially and seasonally, because the factors were linked with the geographical environments and seasonal variations in freshwater discharge. In particular, the Seomjin River was primarily responsible for nitrate, silicate, total alkalinity, and dissolved inorganic carbon, and exhibited a significant impact in the summer. During the past 10 years, nutrient loads from the river and industrial complexes to the bay have decreased. The impacts of this decrease are visible in the phosphate concentration, which has fallen to a third of its initial value. We also examined the potential role of atmospheric nitrogen deposition in nitrogen cycling in the study area.

Contribution of Cultural Eutrophication to Marsh Loss in Jamaica Bay (NY)

EPA Science Inventory

Loss of salt marsh area in the Jamaica Bay Estuary (NY) has accelerated in recent years, with loss rates as high as 45 acres per year. A contributing factor to this acceleration is likely cultural eutrophication due to over 6 decades of sewage effluent inputs. We examined marsh...

Lessons from monitoring water quality in San Francisco Bay

USGS Publications Warehouse

Cloern, J.E.; Schraga, T.S.; Lopez, C.B.; Labiosa, R.

2003-01-01

Bay Area residents feel a sense of responsibility to protect San Francisco Bay and keep it healthy. Some even dream about the recovery of fish stocks so they can sustain commercial fishing once again inside the Bay. How is our Bay doing? Is it highly polluted or pretty clean? How does its health compare with other estuaries in the United States? Are things getting better or worse? Does costly wastewater treatment have benefits? What are the biggest threats to the Bay and how can we reduce or eliminate those threats? How will the Bay change in the future? These questions can only be answered with investments in study and monitoring, and they are the driving force behind the Regional Monitoring Program (RMP). We describe here some selected results from water quality surveillance conducted by the U.S. Geological Survey (USGS) as one component of the RMP. We present results as lessons about how the Bay works as a complex dynamic system, and we show how these lessons are relevant to the broad RMP objectives supporting Bay protection and management.

Gulf of Mexico Integrated Science - Tampa Bay Study - Characterization of Tidal Wetlands

USGS Publications Warehouse

McIvor, Carole

2005-01-01

Tidal wetlands in Tampa Bay, Florida, consist of mangrove forests and salt marshes. Wetlands buffer storm surges, provide fish and wildlife habitat, and enhance water quality through the removal of water-borne nutrients and contaminants. Substantial areas of both mangroves and salt marshes have been lost to agricultural, residential, and industrial development in this urban estuary. Wetlands researchers are characterizing the biological components of tidal wetlands and examining the physical factors such as salinity, tidal flushing, and sediment deposition that control the composition of tidal wetland habitats. Wetlands restoration is a priority of resource managers in Tampa Bay. Baseline studies such as these are needed for successful restoration planning and evaluation.

Effect of sediment size on bioleaching of heavy metals from contaminated sediments of Izmir Inner Bay.

PubMed

Guven, Duyusen E; Akinci, Gorkem

2013-09-01

The effect of sediment size on metals bioleaching from bay sediments was investigated by using fine (< 45 microm), medium (45-300 microm), and coarse (300-2000 microm) size fractions of a sediment sample contaminated with Cr, Cu, Pb, and Zn. Chemical speciation of the metals in bulk and size fractions of sediment were studied before and after bioleaching. Microbial activity was provided with mixed cultures of Acidithiobacillus thiooxidans and Acidithiobacillus ferrooxidans. The bioleaching process was carried out in flask experiments for 48 days, by using 5% (W/V) of solid concentration in suspension. Bioleaching was found to be efficient for the removal of selected heavy metals from every size fraction of sediments, where the experiments with the smaller particles resulted in the highest solubilization ratios. At the end of the experimental period, Cr, Cu, Pb and Zn were solubilized to the ratios of 68%, 88%, 72%, and 91% from the fine sediment, respectively. Higher removal efficiencies can be explained by the larger surface area provided by the smaller particles. The changes in the chemical forms of metals were determined and most of the metal releases were observed from the reducible and organic fractions independent from grain size. Higher concentrations were monitored in the residual fraction after bioleaching period, suggesting they are trapped in this fraction, and cannot be solubilized under natural conditions.

Mixed sediment beach processes: Kachemak Bay, Alaska

USGS Publications Warehouse

Ruggiero, P.; Adams, P.N.; Warrick, J.A.

2007-01-01

Mixed sediment beaches are morphologically distinct from and more complex than either sand or gravel only beaches. Three digital imaging techniques are employed to quantify surficial grain size and bedload sediment transport rates along the mixed sediment beaches of Kachemak Bay, Alaska. Applying digital imaging procedures originally developed for quickly and efficiently quantifying grain sizes of sand to coarse sediment classes gives promising results. Hundreds of grain size estimates lead to a quantitative characterization of the region's sediment at a significant reduction in cost and time as compared to traditional techniques. Both the sand and coarse fractions on this megatidal beach mobilize into self-organized bedforms that migrate alongshore with a seasonally reflecting the temporal pattern of the alongshore component of wave power. In contrast, the gravel bedforms also migrate in the cross-shore without significant seasonally suggesting that swash asymmetry is sufficient to mobilize the gravel even during low energy summer conditions. ?? 2007 ASCE.

The Neoglacial landscape and human history of Glacier Bay, Glacier Bay National Park and Preserve, southeast Alaska, USA

USGS Publications Warehouse

Connor, C.; Streveler, G.; Post, A.; Monteith, D.; Howell, W.

2009-01-01

The Neoglacial landscape of the Huna Tlingit homeland in Glacier Bay is recreated through new interpretations of the lower Bay's fjordal geomorphology, late Quaternary geology and its ethnographic landscape. Geological interpretation is enhanced by 38 radiocarbon dates compiled from published and unpublished sources, as well as 15 newly dated samples. Neoglacial changes in ice positions, outwash and lake extents are reconstructed for c. 5500?????"200 cal. yr ago, and portrayed as a set of three landscapes at 1600?????"1000, 500?????"300 and 300?????"200 cal. yr ago. This history reveals episodic ice advance towards the Bay mouth, transforming it from a fjordal seascape into a terrestrial environment dominated by glacier outwash sediments and ice-marginal lake features. This extensive outwash plain was building in lower Glacier Bay by at least 1600 cal. yr ago, and had filled the lower bay by 500 cal. yr ago. The geologic landscape evokes the human-described landscape found in the ethnographic literature. Neoglacial climate and landscape dynamism created difficult but endurable environmental conditions for the Huna Tlingit people living there. Choosing to cope with environmental hardship was perhaps preferable to the more severely deteriorating conditions outside of the Bay as well as conflicts with competing groups. The central portion of the outwash plain persisted until it was overridden by ice moving into Icy Strait between AD 1724?????"1794. This final ice advance was very abrupt after a prolonged still-stand, evicting the Huna Tlingit from their Glacier Bay homeland. ?? 2009 SAGE Publications.

Microbial diversity in restored wetlands of San Francisco Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Theroux, Susanna; Hartman, Wyatt; He, Shaomei

Wetland ecosystems may serve as either a source or a sink for atmospheric carbon and greenhouse gases. This delicate carbon balance is influenced by the activity of belowground microbial communities that return carbon dioxide and methane to the atmosphere. Wetland restoration efforts in the San Francisco Bay-Delta region may help to reverse land subsidence and possibly increase carbon storage in soils. However, the effects of wetland restoration on microbial communities, which mediate soil metabolic activity and carbon cycling, are poorly studied. In an effort to better understand the underlying factors which shape the balance of carbon flux in wetland soils,more » we targeted the microbial communities in a suite of restored and historic wetlands in the San Francisco Bay-Delta region. Using DNA and RNA sequencing, coupled with greenhouse gas monitoring, we profiled the diversity and metabolic potential of the wetland soil microbial communities along biogeochemical and wetland age gradients. Our results show relationships among geochemical gradients, availability of electron acceptors, and microbial community composition. Our study provides the first genomic glimpse into microbial populations in natural and restored wetlands of the San Francisco Bay-Delta region and provides a valuable benchmark for future studies.« less

Polychlorinated biphenyl pollution from shipbuilding in Nagasaki Bay, Japan

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maruyama, K.; Sahrul, M.; Tanabe, S.

1983-10-01

Polychlorinated biphenyl (PCB) pollution from shipbuilding in Nagasaki Bay, Japan, was determined by measurement of PCB concentrations in sediment, in water, and in biological samples. PCBs were detected in all samples; much higher concentrations, more than 10 micrograms/g, were found in three sediment samples located near the shipyard drains. In general, PCB concentrations in sediments and organisms tended to increase toward the inner part of the bay. PCB isomer and congener compositions in organisms as well as sediments were composed mainly of higher chlorinated biphenyls and were similar to Kanechlor 500 and 600 products (chlorine content 54 and 60%, respectively)more » that have been used for ship paints. These results strongly suggest that the shipbuilding is primarily responsible for the PCB pollution in Nagasaki Bay. Bioaccumulation factors of PCBs were different among the organisms according to their trophic levels. This might be a result of the predominant PCB transfer through the food chain in organisms and the discharge of bioaccumulative PCBs as higher chlorinated biphenyls from shipyards. The observations imply that PCB pollution from shipbuilding would continue for a long time due to the accumulative characteristics of PCBs used for ship paints and the further discharge by scraping the stale paints in shipyards.« less

Polychlorinated biphenyl pollution from shipbuilding in Nagasaki Bay, Japan.

PubMed

Maruyama, K; Sahrul, M; Tanabe, S; Tatsukawa, R

1983-10-01

Polychlorinated biphenyl (PCB) pollution from shipbuilding in Nagasaki Bay, Japan, was discussed by determining PCB concentrations in sediment, in water, and in biological samples. PCBs were detected in all samples, in which much higher concentrations, more than 10 micrograms/g, were found in three sediment samples where located near the shipyard drains. In general, PCB concentrations in sediments and organisms tended to increase toward the inner part of this bay. PCB isomer and congener compositions in organisms as well as sediments were composed mainly of higher chlorinated biphenyls and almost similar to Kanechlor 500 and 600 products (chlorine content 54 and 60%, respectively) that have been used for ship paints. These results strongly suggest that the shipbuilding is primarily responsible for the PCB pollution in Nagasaki Bay. Bioaccumulation factors of PCBs were different among the organisms according to their trophic levels. This might be a result of the predominant PCB transfer through the food chain in organisms and the discharge of bioaccumulative PCBs as higher chlorinated biphenyls from shipyards. These observations imply that the PCB pollution from shipbuilding would continue for a long time due to the accumulative characteristics of PCBs used for ship paints and the further discharge by scraping the stale paints in shipyards.

Atmospheric production of oxalic acid/oxalate and nitric acid/nitrate in the Tampa Bay airshed: Parallel pathways

NASA Astrophysics Data System (ADS)

Martinelango, P. Kalyani; Dasgupta, Purnendu K.; Al-Horr, Rida S.

Oxalic acid is the dominant dicarboxylic acid (DCA), and it constitutes up to 50% of total atmospheric DCAs, especially in non-urban and marine atmospheres. A significant amount of particulate H 2Ox/oxalate (Ox) occurred in the coarse particle fraction of a dichotomous sampler, the ratio of oxalate concentrations in the PM 10 to PM 2.5 fractions ranged from 1 to 2, with mean±sd being 1.4±0.2. These results suggest that oxalate does not solely originate in the gas phase and condense into particles. Gaseous H 2Ox concentrations are much lower than particulate Ox concentrations and are well correlated with HNO 3, HCHO, and O 3, supporting a photochemical origin. Of special relevance to the Bay Region Atmospheric Chemistry Experiment (BRACE) is the extent of nitrogen deposition in the Tampa Bay estuary. Hydroxyl radical is primarily responsible for the conversion of NO 2 to HNO 3, the latter being much more easily deposited. Hydroxyl radical is also responsible for the aqueous phase formation of oxalic acid from alkenes. Hence, we propose that an estimate of rad OH can be obtained from H 2Ox/Ox production rate and we accordingly show that the product of total oxalate concentration and NO 2 concentration approximately predicts the total nitrate concentration during the same period.

Evaluation of potential protective factors against metabolic syndrome in bottlenose dolphins:feeding and activity patterns of dolphins in Sarasota Bay, Florida

USGS Publications Warehouse

Wells, Randall S.; McHugh, Katherine A.; Douglas, David C.; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B.; Phillips, Goldie T.

2014-01-01

Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins.

Evaluation of Potential Protective Factors Against Metabolic Syndrome in Bottlenose Dolphins: Feeding and Activity Patterns of Dolphins in Sarasota Bay, Florida

PubMed Central

Wells, Randall S.; McHugh, Katherine A.; Douglas, David C.; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B.; Phillips, Goldie T.

2013-01-01

Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins. PMID:24133483

[Fish larvae association in a Mexican Caribbean bay].

PubMed

Quintal-Lizama, C; Vásquez-Yeomans, L

2001-06-01

Interannual ichthyoplankton variation, was analyzed in Bahía de la Ascensión, Mexico, during December of four consecutive years (1994-1997). A total of 32 families, 35 genera and 21 species of fish larvae were identified. The most abundant fish larvae were the Gobiidae followed by the Callionymidae, Clupeidae and Tetraodontidae. Larval diversity was low when compared with other periods ("dry" and "rainy"). Three spatial associations (internal, medium and external) were found in December 1994 and 1995. In 1996-1997, stations of the inner and outer parts of the bay were mixed. The dominant families characterized most of the faunal associations. Egg density was highest in the external zone of the bay, whereas larvae were most abundant in the inner area. Major factors affecting the fish larval assemblages during December (1994-1997) in Bahía de la Ascensión seem to be related to the nursery areas location and to the tropical fishes reproductive period.

Joint Task Force -Guantanamo Bay, Cuba: Open or Close?

DTIC Science & Technology

2013-03-01

Obama signed that executive order directing the closure of detention operations at Guantanamo Bay. Subsequently, despite domestically political and...domestically political and international scrutiny, detention operations at Guantanamo Bay, Cuba have evolved into the premier detention facility in the...operations at Guantanamo Bay. Subsequently, despite domestically political and international scrutiny, detention operations at Guantanamo Bay, Cuba

Occurance and survival of Vibrio alginolyticus in Tamouda Bay (Morocco).

PubMed

Sabir, M; Cohen, N; Boukhanjer, A; Ennaji, M M

2011-10-15

The objectives of this study were to investigate the spatial and seasonal fluctuations of Vibrio alginolyticus in marine environment of the Tamouda Bay on the Mediterranean coast of Morocco and to determine the dominant factors of the environment that govern these fluctuations. The samples (sea water, plankton, shellfish and sediment) were collected fortnightly for two years from three study sites on the coast Tamouda Bay in northern Morocco. The charge of Vibrio alginolyticus is determined by MPN method. The physicochemical parameters including temperature of sea water, pH, salinity, turbidity and chlorophyll a concentration were determined. Analysis of variance of specific variables and several principal component analyses showed that the temperature of seawater is the major determinant of seasonal distribution of Vibrio alginolyticus. The results showed a positive linear correlation between Vibrio alginolyticus and the water temperature, pH, turbidity and chlorophyll a. Similarly, there are seasonal variations and spatial of Vibrio alginolyticus in marine environment of the Tamouda bay and the highest concentrations were recorded in both years of study during the warm season whereas it was minimal during the cold season. Linear positive correlation was recorded between Vibrio alginolyticus populations in all ecological types of samples studied.

Algae Reefs in Shark Bay, Western Australia, Australia

NASA Technical Reports Server (NTRS)

1990-01-01

Numerous algae reefs are seen in Shark Bay, Western Australia, Australia (26.0S, 113.5E) especially in the southern portions of the bay. The south end is more saline because tidal flow in and out of the bay is restricted by sediment deposited at the north and central end of the bay opposite the mouth of the Wooramel River. This extremely arid region produces little sediment runoff so that the waters are very clear, saline and rich in algae.

Ecology of southeastern shrub bogs (pocosins) and Carolina bays: a community profile

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sharitz, R.R.; Gibbons, J.W.

1982-11-01

Shrub bogs of the Southeast occur in areas of poorly developed internal drainage that typically but not always have highly developed organic or peat soils. Pocosins and Carolina bays are types or subclasses of shrub bogs on the coastal plains of the Carolinas and Georgia. They share roughly the same distribution patterns, soil types, floral and faunal species composition and other community attributes, but differ in geological formation. Carolina bays may contain pocosin as well as other communities, but are defined more by their unique elliptical shape and geomorphometry. The pocosin community is largely defined by its vegetation, a combinationmore » of a dense shrub understory and a sparser canopy. The community is part of a complex successional sequence of communities (sedge bogs, savannas, cedar bogs, and bay forests) that may be controlled by such factors as fire, hydroperiod, soil type, and peat depth. Pocosins and Carolina bays harbor a number of animal groups and may be locally important in their ecology. Although few species are endemic to these habitats, they may provide important refuges for a number of species. These communities are simultaneously among the least understood and most rapidly disappearing habitats of the Southeast. Forestry and agricultural clearage are current impacts.« less

Bristol Bay Assessment - Final Report (2014)

EPA Pesticide Factsheets

This is the final Bristol Bay assessment developed and peer reviewed by the Office of Research and Development in EPA. The purpose of this assessment is to provide a characterization of the biological and mineral resources of the Bristol Bay watershed.

Central San Francisco Bay suspended-sediment transport processes study and comparison of continuous and discrete measurements of suspended-solids concentrations

USGS Publications Warehouse

Schoellhamer, David H.

1994-01-01

Sediments are an important component of the San Francisco Bay estuarine system. Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles. The sediments on the bottom of the Bay provide the habitat for benthic communities which can ingest these substances and introduce them into the food web. The bottom sediments are also a reservoir of nutrients. The transport and fate of suspended sediment is an important factor in determining the transport and fate of the constituents adsorbed on the sediment. Suspended sediments also limit light availability in the bay, which limits photosynthesis and primary production, and deposit in ports and shipping channels, which require dredging. Dredged materials are disposed in Central San Francisco Bay.

Temporal variations in the benthic communities at four intertidal sites in San Francisco Bay, California, 1983-85

USGS Publications Warehouse

Hopkins, D.R.

1987-01-01

Benthic core samples were collected monthly from January 1983 through January 1985 at four intertidal sites in San Francisco Bay, California, two in the northern part of the bay (North Bay) and two in the southern part of the bay (South Bay). Considerable variation was observed in numbers of species and individuals at the four sites, and abundances within species varied widely. Temporal changes in species abundances appeared to be related to freshwater inflow patterns and resultant salinity variations in the estuary. The 1982-83 winter season was extremely wet, with heavy freshwater inflow to the bay from January through March, whereas the 1983-84 winter was closer to a normal pattern, with most rainfall occurring from November through January. Species were grouped into four categories depending on their patterns of abundance during the 2-yr period. Species that showed an abundance peak in the North Bay in 1983 only were Corophium sp.B and a Chironomidae larva, apparently responding to the extended period of lowered salinity throughout spring and early summer. Species with an abundance peak only in 1984 included Corophium Acherusicum, Eteone californica, Nereis succinea, and Grandidierella japonica, typical estuarine species that might have been suppressed during the extended freshwater inflows in 1983. Species with peaks in both years were Gemma gemma and Ampelisca abdita in the South Bay; both showed strong seasonal variations. A number of species in both North and South Bays, including dominant members of the intertidal community such as Macoma balthical and Streblospio benedicti, did not show any consistent seasonal or year-to-year trends. Results of this study suggest that the intensity and timing of freshwater inflow to San Francisco Bay, particularly higher-than-normal inflow during late spring and early summer, may be an important factor in determining the composition of the intertidal benthic communities. (Author 's abstract)

Consortial brown tide - picocyanobacteria blooms in Guantánamo Bay, Cuba.

PubMed

Hall, Nathan S; Litaker, R Wayne; Kenworthy, W Judson; Vandersea, Mark W; Sunda, William G; Reid, James P; Slone, Daniel H; Butler, Susan

2018-03-01

A brown tide bloom of Aureoumbra lagunensis developed in Guantánamo Bay, Cuba during a period of drought in 2013 that followed heavy winds and rainfall from Hurricane Sandy in late October 2012. Based on satellite images and water turbidity measurements, the bloom appeared to initiate in January 2013. The causative species (A. lagunensis) was confirmed by microscopic observation, and pigment and genetic analyses of bloom samples collected on May 28 of that year. During that time, A. lagunensis reached concentrations of 900,000 cells ml -1 (28 ppm by biovolume) in the middle portion of the Bay. Samples could not be collected from the northern (Cuban) half of the Bay because of political considerations. Subsequent sampling of the southern half of the Bay in November 2013, April 2014, and October 2014 showed persistent lower concentrations of A. lagunensis, with dominance shifting to the cyanobacterium Synechococcus (up to 33 ppm in April), an algal group that comprised a minor bloom component on May 28. Thus, unlike the brown tide bloom in Laguna Madre, which lasted 8 years, the bloom in Guantánamo Bay was short-lived, much like recent blooms in the Indian River, Florida. Although hypersaline conditions have been linked to brown tide development in the lagoons of Texas and Florida, observed euhaline conditions in Guantánamo Bay (salinity 35-36) indicate that strong hypersalinity is not a requirement for A. lagunensis bloom formation. Microzooplankton biomass dominated by ciliates was high during the observed peak of the brown tide, and ciliate abundance was high compared to other systems not impacted by brown tide. Preferential grazing by zooplankton on non-brown tide species, as shown in A. lagunensis blooms in Texas and Florida, may have been a factor in the development of the Cuban brown tide bloom. However, subsequent selection of microzooplankton capable of utilizing A. lagunensis as a primary food source may have contributed to the short-lived duration

Time series models of decadal trends in the harmful algal species Karlodinium veneficum in Chesapeake Bay.

PubMed

Lin, Chih-Hsien Michelle; Lyubchich, Vyacheslav; Glibert, Patricia M

2018-03-01

The harmful dinoflagellate, Karlodnium veneficum, has been implicated in fish-kill and other toxic, harmful algal bloom (HAB) events in waters worldwide. Blooms of K. veneficum are known to be related to coastal nutrient enrichment but the relationship is complex because this HAB taxon relies not only on dissolved nutrients but also particulate prey, both of which have also changed over time. Here, applying cross-correlations of climate-related physical factors, nutrients and prey, with abundance of K. veneficum over a 10-year (2002-2011) period, a synthesis of the interactive effects of multiple factors on this species was developed for Chesapeake Bay, where blooms of the HAB have been increasing. Significant upward trends in the time series of K. veneficum were observed in the mesohaline stations of the Bay, but not in oligohaline tributary stations. For the mesohaline regions, riverine sources of nutrients with seasonal lags, together with particulate prey with zero lag, explained 15%-46% of the variation in the K. veneficum time series. For the oligohaline regions, nutrients and particulate prey generally showed significant decreasing trends with time, likely a reflection of nutrient reduction efforts. A conceptual model of mid-Bay blooms is presented, in which K. veneficum, derived from the oceanic end member of the Bay, may experience enhanced growth if it encounters prey originating from the tributaries with different patterns of nutrient loading and which are enriched in nitrogen. For all correlation models developed herein, prey abundance was a primary factor in predicting K. veneficum abundance. Copyright © 2018 Elsevier B.V. All rights reserved.

Management case study: Tampa Bay, Florida

USGS Publications Warehouse

Morrison, Gerold; Greening, Holly; Yates, Kimberly K.; Wolanski, Eric; McLusky, Donald S.

2011-01-01

Tampa Bay, Florida, USA, is a shallow, subtropical estuary that experienced severe cultural eutrophication between the 1940s and 1980s, a period when the human population of its watershed quadrupled. In response, citizen action led to the formation of a public- and private-sector partnership (the Tampa Bay Estuary Program), which adopted a number of management objectives to support the restoration and protection of the bay’s living resources. These included numeric chlorophyll a and water-clarity targets, as well as long-term goals addressing the spatial extent of seagrasses and other selected habitat types, to support estuarine-dependent faunal guilds. Over the past three decades, nitrogen controls involving sources such as wastewater treatment plants, stormwater conveyance systems, fertilizer manufacturing and shipping operations, and power plants have been undertaken to meet these and other management objectives. Cumulatively, these controls have resulted in a 60% reduction in annual total nitrogen (TN) loads relative to earlier worse-case (latter 1970s) conditions. As a result, annual water-clarity and chlorophyll a targets are currently met in most years, and seagrass cover measured in 2008 was the highest recorded since 1950. Factors that have contributed to the observed improvements in Tampa Bay over the past several decades include the following: (1) Development of numeric, science-based water-quality targets to meet a long-term goal of restoring seagrass acreage to 1950s levels. Empirical and mechanistic models found that annual average chlorophyll a concentrations were a primary manageable factor affecting light attenuation. The models also quantified relationships between TN loads, chlorophyll a concentrations, light attenuation, and fluctuations in seagrass cover. The availability of long-term monitoring data, and a systematic process for using the data to evaluate the effectiveness of management actions, has allowed managers to track progress and

Enhancing hair growth in male androgenetic alopecia by a combination of fractional CO2 laser therapy and hair growth factors.

PubMed

Huang, Yue; Zhuo, Fenglin; Li, Linfeng

2017-11-01

Laser therapy and growth factors have been used as alternative treatments for male androgenetic alopecia (MAA). The aim of this study is to determine the efficacy and safety of hair growth factors alone or combined with ablative carbon dioxide (CO 2 ) fractional laser therapy in MAA. Twenty-eight men were enrolled in this randomized half-split study based on a left-head to right-head pattern. Fractional CO 2 laser treatment was unilaterally performed; hair growth factors were bilaterally applied. Six sessions with 2-week intervals were performed. Global photographs and dermoscopy assessments were performed at the baseline and 4 months after first treatment. Global photographs underwent blinded review by three independent dermatologists. Scanning electron microscopy was used to compare changes in hair-follicle phase and hair-shaft diameter. Twenty-seven participants completed the 4-month treatment schedule. One patient was lost. Mean hair density increased from 114 ± 27 to 143 ± 25/cm 2 (P < 0.001) in the combined group and from 113 ± 24 to 134 ± 19/cm 2 in the growth factor group (P < 0.001). The mean change from baseline between two groups was also compared (P = 0.003). Global photographs showed improvement in 93% (25/27) patients in the combined group and 67% (18/27) patients in the growth factor group. Under scanning electron microscopy, hair follicles appeared to transition from telogen to anagen, and hair-shaft diameter increased in five randomly selected patients. Ablative fractional CO 2 laser combined with hair growth factors may serve as an alternative treatment for MAA in individuals unwilling/unable to undergo medical or surgical treatment.

76 FR 31851 - Safety Zone; Put-in-Bay Fireworks, Fox's the Dock Pier; South Bass Island, Put-in-Bay, OH

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-02

... DEPARTMENT OF HOMELAND SECURITY Coast Guard 33 CFR Part 165 [Docket No. USCG-2011-0417] RIN 1625-AA00 Safety Zone; Put-in-Bay Fireworks, Fox's the Dock Pier; South Bass Island, Put-in-Bay, OH AGENCY.... Add Sec. 165.T09-0417 as follows: Sec. 165.T09-0417 Safety Zone; Put-In-Bay Fireworks, Fox's the Dock...

SF Bay Delta TMDL Progress Assessment

EPA Pesticide Factsheets

EPA assessed the progress 14 TMDLs in the SF Bay Delta Estuary (SF Bay Delta) to determine if the actions called for in the TMDL were being accomplished and water quality was improving. Status and water quality reports can be found here.

Occurrence, speciation and transportation of heavy metals in 9 coastal rivers from watershed of Laizhou Bay, China.

PubMed

Xu, Li; Wang, Tieyu; Wang, Jihua; Lu, Anxiang

2017-04-01

The occurrence, speciation and transport of heavy metals in 9 coastal rivers from watershed of Laizhou Bay were investigated. The largest dissolved concentrations of Cd, Cu and Zn in water were 6.26, 2755.00, 2076.00 μg/L, respectively, much higher than several drinking water guidelines. The greatest concentrations of Cu, Zn, Cr, Ni, Pb and Cd in sediments were 1462, 1602, 196, 67.2, 63.5 and 1.41 mg/kg, dw, respectively. Correlation and principal component analysis was also conducted to determine the extent between the concentrations of metals in water and sediment, as well as relevant parameters. Throughout the river stretch, most of Cr Zn, Cr, Ni and Pb bound to residual fraction, however, Cd was preferentially bound to the exchangeable phase. Among the 9 rivers, Yellow river account for 72.5%, 67.5%, 55.4%, 59.4%, 79.4% and 85.5% for Cr, Ni, Cu, Zn. Cd and Pb, respectively. The combined potential ecological risk indexes were used to evaluate potential risks. The majority of sampling sites from watershed of Laizhou Bay have moderate ecological risk from metals. The government should pay more attention to the ecological risk of river ecosystem which flow to Laizhou Bay. Copyright © 2017 Elsevier Ltd. All rights reserved.

[Plasma fractionation in the world: current status].

PubMed

Burnouf, T

2007-05-01

From 22 to 25 million liters of plasma are fractionated yearly in about 70 fractionation plants, either private or government-owned, mainly located in industrialized countries, and with a capacity ranging from 50000 to three million liters. In an increasingly global environment, the plasma industry has recently gone through a major consolidation phase that has seen mergers and acquisitions, and has led to the closure of a number of small plants in Europe. Currently, some fifteen countries are involved into contract plasma fractionation programs to ensure a supply of plasma-derived medicinal products. The majority of the plasma for fractionation is obtained by automated plasmapheresis, the remaining (recovered plasma) being prepared from whole blood as a by-product of red cell production. Plasma for fractionation should be produced, and controlled following well established procedures to meet the strict quality requirements set by regulatory authorities and fractionators. The plasma fractionation technology still relies heavily on the cold ethanol fractionation process, but has been improved by the introduction of modern chromatographic purification methods, and efficient viral inactivation and removal treatments, ensuring quality and safety to a large portfolio of fractionated plasma products. The safety of these products with regards to the risk of transmission of variant Creutzfeldt-Jakob disease seems to be provided, based on current scientific data, by extensive removal of the infectious agent during certain fractionation steps. The leading plasma product is now the intravenous immunoglobulin G, which has replaced factor VIII and albumin in this role. The supply of plasma products (most specifically coagulation products and immunoglobulin) at an affordable price and in sufficient quantity remains an issue; the problem is particularly acute in developing countries, as the switch to recombinant factor VIII in rich countries has not solved the supply issue and has

Bayesian Factor Analysis When Only a Sample Covariance Matrix Is Available

ERIC Educational Resources Information Center

Hayashi, Kentaro; Arav, Marina

2006-01-01

In traditional factor analysis, the variance-covariance matrix or the correlation matrix has often been a form of inputting data. In contrast, in Bayesian factor analysis, the entire data set is typically required to compute the posterior estimates, such as Bayes factor loadings and Bayes unique variances. We propose a simple method for computing…

Toxic phytoplankton in San Francisco Bay

USGS Publications Warehouse

Rodgers, Kristine M.; Garrison, David L.; Cloern, James E.

1996-01-01

The Regional Monitoring Program (RMP) was conceived and designed to document the changing distribution and effects of trace substances in San Francisco Bay, with focus on toxic contaminants that have become enriched by human inputs. However, coastal ecosystems like San Francisco Bay also have potential sources of naturally-produced toxic substances that can disrupt food webs and, under extreme circumstances, become threats to public health. The most prevalent source of natural toxins is from blooms of algal species that can synthesize metabolites that are toxic to invertebrates or vertebrates. Although San Francisco Bay is nutrient-rich, it has so far apparently been immune from the epidemic of harmful algal blooms in the world’s nutrient-enriched coastal waters. This absence of acute harmful blooms does not imply that San Francisco Bay has unique features that preclude toxic blooms. No sampling program has been implemented to document the occurrence of toxin-producing algae in San Francisco Bay, so it is difficult to judge the likelihood of such events in the future. This issue is directly relevant to the goals of RMP because harmful species of phytoplankton have the potential to disrupt ecosystem processes that support animal populations, cause severe illness or death in humans, and confound the outcomes of toxicity bioassays such as those included in the RMP. Our purpose here is to utilize existing data on the phytoplankton community of San Francisco Bay to provide a provisional statement about the occurrence, distribution, and potential threats of harmful algae in this Estuary.

33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

Code of Federal Regulations, 2012 CFR

2012-07-01

..., Carquinez Strait, Suisun Bay, California. (a) Locations. The following areas are security zones: (1) Chevron... sea floor within approximately 100 yards of the Chevron Long Wharf, Richmond, CA, and encompasses all...

33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., Carquinez Strait, Suisun Bay, California. (a) Locations. The following areas are security zones: (1) Chevron... sea floor within approximately 100 yards of the Chevron Long Wharf, Richmond, CA, and encompasses all...

33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

Code of Federal Regulations, 2011 CFR

2011-07-01

..., Carquinez Strait, Suisun Bay, California. (a) Locations. The following areas are security zones: (1) Chevron... sea floor within approximately 100 yards of the Chevron Long Wharf, Richmond, CA, and encompasses all...

33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

Code of Federal Regulations, 2014 CFR

2014-07-01

..., Carquinez Strait, Suisun Bay, California. (a) Locations. The following areas are security zones: (1) Chevron... sea floor within approximately 100 yards of the Chevron Long Wharf, Richmond, CA, and encompasses all...

33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

Code of Federal Regulations, 2013 CFR

2013-07-01

..., Carquinez Strait, Suisun Bay, California. (a) Locations. The following areas are security zones: (1) Chevron... sea floor within approximately 100 yards of the Chevron Long Wharf, Richmond, CA, and encompasses all...

Atmospheric deposition of organochlorine contaminants to Galveston Bay, Texas

NASA Astrophysics Data System (ADS)

Park, June-Soo; Wade, Terry L.; Sweet, Stephen

Atmospheric monitoring of PCBs and chlorinated pesticides (e.g., HCHs, chlordanes, and DDTs) in Galveston Bay was conducted at Seabrook, Texas. Air and wet deposition samples were collected from 2 February 1995 and continued through 6 August 1996. Vapor total PCB ( tPCB) concentrations in air ranged from 0.21 to 4.78 ng m -3 with a dominance of tri-chlorinated PCBs. Dissolved tPCBs in rain ranged from 0.08 to 3.34 ng l -1, with tetra-chlorinated PCBs predominating. The predominant isomers found in air and rain were α- and γ-HCH, α- and γ-chlordanes, 4,4'-DDT, and dieldrin. The concentrations of PCBs and pesticides in the air and rain revealed no clear seasonal trend. Elevated levels of PCBs in the air occurred when temperatures were high and wind came from urban and industrialized areas (S, SW, NW, and W of the site). Concentrations of HCHs were elevated in April, May, and October, perhaps due to local and/or regional applications of γ-HCH (lindane). Other pesticides showed no notable temporal variation. When winds originated from the Gulf of Mexico (southeasterly), lower concentrations of organochlorines were detected in the air. The direct deposition rate (wet+dry) of PCBs to Galveston Bay (6.40 μg m -2 yr -1) was significantly higher than that of pesticides by a factor of 5-10. The net flux from gas exchange estimated for PCBs was from Galveston Bay water to the atmosphere (78 μg m -2 yr -1). Gas exchange of PCBs from bay water to the atmosphere was the dominant flux.

Mass fractionation processes of transition metal isotopes

NASA Astrophysics Data System (ADS)

Zhu, X. K.; Guo, Y.; Williams, R. J. P.; O'Nions, R. K.; Matthews, A.; Belshaw, N. S.; Canters, G. W.; de Waal, E. C.; Weser, U.; Burgess, B. K.; Salvato, B.

2002-06-01

Recent advances in mass spectrometry make it possible to utilise isotope variations of transition metals to address some important issues in solar system and biological sciences. Realisation of the potential offered by these new isotope systems however requires an adequate understanding of the factors controlling their isotope fractionation. Here we show the results of a broadly based study on copper and iron isotope fractionation during various inorganic and biological processes. These results demonstrate that: (1) naturally occurring inorganic processes can fractionate Fe isotope to a detectable level even at temperature ˜1000°C, which challenges the previous view that Fe isotope variations in natural system are unique biosignatures; (2) multiple-step equilibrium processes at low temperatures may cause large mass fractionation of transition metal isotopes even when the fractionation per single step is small; (3) oxidation-reduction is an importation controlling factor of isotope fractionation of transition metal elements with multiple valences, which opens a wide range of applications of these new isotope systems, ranging from metal-silicate fractionation in the solar system to uptake pathways of these elements in biological systems; (4) organisms incorporate lighter isotopes of transition metals preferentially, and transition metal isotope fractionation occurs stepwise along their pathways within biological systems during their uptake.

Algae Reefs in Shark Bay, Western Australia, Australia

NASA Image and Video Library

1990-12-10

STS035-81-040 (2-10 Dec 1990) --- Numerous algae reefs are seen in Shark Bay, Western Australia, Australia (26.0S, 113.5E) especially in the southern portions of the bay. The south end is more saline because tidal flow in and out of the bay is restricted by sediment deposited at the north and central end of the bay opposite the mouth of the Wooramel River. This extremely arid region produces little sediment runoff so that the waters are very clear, saline and rich in algae.

Factors related to outcome in heart failure with a preserved (or normal) left ventricular ejection fraction.

PubMed

Sanderson, John E

2016-07-01

Heart failure with a preserved ejection faction (HFpEF) is a growing and expensive cause of heart failure (HF) affecting particularly the elderly. It differs in substantial ways in addition to the normal left ventricular ejection fraction, from the more easily recognized form of heart failure with a reduced ejection fraction (HFrEF or 'systolic heart failure') and unlike HFrEF there have been little advances in treatment. In part, this relates to the complexity of the pathophysiology and identifying the correct targets. In HFpEF, there appears to be widespread stiffening of the vasculature and the myocardium affecting ventricular function (both systolic and diastolic), impeding ventricular suction, and thus early diastolic filling leading to breathlessness on exertion and later atrial failure and fibrillation. Left ventricular ejection fraction tends to gradually decline and some evolve into HFrEF. Most patients also have a mixture of several co-morbidities including hypertension, diabetes, obesity, poor renal function, lack of fitness, and often poor social conditions. Therefore, many factors may influence outcome in an individual patient. In this review, the epidemiology, possible causation, pathophysiology, the influence of co-morbidities and some of the many potential predictors of outcome will be considered.

33 CFR 117.1101 - Sturgeon Bay.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Sturgeon Bay. 117.1101 Section 117.1101 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The Bayview...

33 CFR 117.1101 - Sturgeon Bay.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Sturgeon Bay. 117.1101 Section 117.1101 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The Bayview...

33 CFR 165.1107 - San Diego Bay, California.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false San Diego Bay, California. 165... Navigation Areas and Limited Access Areas Eleventh Coast Guard District § 165.1107 San Diego Bay, California... docking/undocking operations at the U.S. Naval Submarine Base on Ballast Point, San Diego Bay, California...

33 CFR 165.1107 - San Diego Bay, California.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false San Diego Bay, California. 165... Navigation Areas and Limited Access Areas Eleventh Coast Guard District § 165.1107 San Diego Bay, California... docking/undocking operations at the U.S. Naval Submarine Base on Ballast Point, San Diego Bay, California...

33 CFR 165.1107 - San Diego Bay, California.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false San Diego Bay, California. 165... Navigation Areas and Limited Access Areas Eleventh Coast Guard District § 165.1107 San Diego Bay, California... docking/undocking operations at the U.S. Naval Submarine Base on Ballast Point, San Diego Bay, California...

Integrating science and resource management in Tampa Bay, Florida

USGS Publications Warehouse

Yates, Kimberly K.; Greening, Holly; Morrison, Gerold

2011-01-01

Tampa Bay is recognized internationally for its remarkable progress towards recovery since it was pronounced "dead" in the late 1970s. Due to significant efforts by local governments, industries and private citizens throughout the watershed, water clarity in Tampa Bay is now equal to what it was in 1950, when population in the watershed was less than one-quarter of what it is today. Seagrass extent has increased by more than 8,000 acres since the mid-1980s, and fish and wildlife populations are increasing. Central to this successful turn-around has been the Tampa Bay resource management community's long-term commitment to development and implementation of strong science-based management strategies. Research institutions and agencies, including Eckerd College, the Florida Wildlife Commission Fish and Wildlife Research Institute, Mote Marine Laboratory, National Oceanic and Atmospheric Administration, the Southwest Florida Water Management District, University of South Florida, U.S. Environmental Protection Agency, U.S. Geological Survey, local and State governments, and private companies contribute significantly to the scientific basis of our understanding of Tampa Bay's structure and ecological function. Resource management agencies, including the Tampa Bay Regional Planning Council's Agency on Bay Management, the Southwest Florida Water Management District's Surface Water Improvement and Management Program, and the Tampa Bay Estuary Program, depend upon this scientific basis to develop and implement regional adaptive management programs. The importance of integrating science with management has become fully recognized by scientists and managers throughout the region, State and Nation. Scientific studies conducted in Tampa Bay over the past 10–15 years are increasingly diverse and complex, and resource management programs reflect our increased knowledge of geology, hydrology and hydrodynamics, ecology and restoration techniques. However, a synthesis of this

Multivariate and geo-spatial approach for seawater quality of Chidiyatappu Bay, south Andaman Islands, India.

PubMed

Jha, Dilip Kumar; Vinithkumar, Nambali Valsalan; Sahu, Biraja Kumar; Dheenan, Palaiya Sukumaran; Das, Apurba Kumar; Begum, Mehmuna; Devi, Marimuthu Prashanthi; Kirubagaran, Ramalingam

2015-07-15

Chidiyatappu Bay is one of the least disturbed marine environments of Andaman & Nicobar Islands, the union territory of India. Oceanic flushing from southeast and northwest direction is prevalent in this bay. Further, anthropogenic activity is minimal in the adjoining environment. Considering the pristine nature of this bay, seawater samples collected from 12 sampling stations covering three seasons were analyzed. Principal Component Analysis (PCA) revealed 69.9% of total variance and exhibited strong factor loading for nitrite, chlorophyll a and phaeophytin. In addition, analysis of variance (ANOVA-one way), regression analysis, box-whisker plots and Geographical Information System based hot spot analysis further simplified and supported multivariate results. The results obtained are important to establish reference conditions for comparative study with other similar ecosystems in the region. Copyright © 2015 Elsevier Ltd. All rights reserved.

Study on bayes discriminant analysis of EEG data.

PubMed

Shi, Yuan; He, DanDan; Qin, Fang

2014-01-01

In this paper, we have done Bayes Discriminant analysis to EEG data of experiment objects which are recorded impersonally come up with a relatively accurate method used in feature extraction and classification decisions. In accordance with the strength of α wave, the head electrodes are divided into four species. In use of part of 21 electrodes EEG data of 63 people, we have done Bayes Discriminant analysis to EEG data of six objects. Results In use of part of EEG data of 63 people, we have done Bayes Discriminant analysis, the electrode classification accuracy rates is 64.4%. Bayes Discriminant has higher prediction accuracy, EEG features (mainly αwave) extract more accurate. Bayes Discriminant would be better applied to the feature extraction and classification decisions of EEG data.

Using DTPA-extractable soil fraction to assess the bioconcentration factor of plants in phytoremediation of urban soils

NASA Astrophysics Data System (ADS)

Rodríguez-Bocanegra, Javier; Roca, Núria; Tume, Pedro; Bech, Jaume

2017-04-01

Urban soils may be highly contaminated with potentially toxic metals, as a result of intensive anthropogenic activities. Developing cities are increasing the number of lands where is practiced the urban agriculture. In this way, it is necessary to assess the part of heavy metals that is transferred to plants in order to a) know the potential health risk that represent soils and b) know the relation soil-plant to assess the ability of these plants to remove heavy metals from soil. Nowadays, to assess the bioconcentration factor (BF) of plants in phytoremediation, the pseudototal o total concentration has been used by many authors. Two different urban soils with similar pH and carbonates content but with different pollution degree were phytoremediated with different plant species. Urban soil from one Barcelona district (Spain), the most contaminated soil, showed an extractability of Cu, Pb and Zn of 9.6, 6.7 and 5.8% of the total fraction respectively. The soil from Talcahuano city (Chile), with contents of heavy metals slightly above the background upper limit, present values of 15.5, 13.5 and 12% of the total fraction of studied heavy metals. Furthermore, a peri-urban analysed soil from Azul (Argentina) also showed an elevated extractability with values of 24, 13.5 and 14% of the Cu, Pb and Zn contents respectively. These soils presented more extractability than other disturbed soils, like for example, soils from mine areas. The urban soils present more developed soil with an interaction between solution and solid phase in polluted systems. The most important soil surface functional groups include the basal plane of phyllosilicates and metal hydroxyls at edge sites of clay minerals, iron oxyhydroxides, manganese oxyhydroxides and organic matter. The interaction between solution and solid phase in polluted urban systems tends to form labile associations and pollutants are more readily mobilized because their bonds with soil particles are weaker. Clay and organic

Soundscape Ecology of Hawaiian Spinner Dolphin Resting Bays

NASA Astrophysics Data System (ADS)

Heenehan, Heather Leigh

Sound is a key sensory modality for Hawaiian spinner dolphins. Like many other marine animals, these dolphins rely on sound and their acoustic environment for many aspects of their daily lives, making it is essential to understand soundscape in areas that are critical to their survival. Hawaiian spinner dolphins rest during the day in shallow coastal areas and forage offshore at night. In my dissertation I focus on the soundscape of the bays where Hawaiian spinner dolphins rest taking a soundscape ecology approach. I primarily relied on passive acoustic monitoring using four DSG-Ocean acoustic loggers in four Hawaiian spinner dolphin resting bays on the Kona Coast of Hawai'i Island. 30-second recordings were made every four minutes in each of the bays for 20 to 27 months between January 8, 2011 and March 30, 2013. I also utilized concomitant vessel-based visual surveys in the four bays to provide context for these recordings. In my first chapter I used the contributions of the dolphins to the soundscape to monitor presence in the bays and found the degree of presence varied greatly from less than 40% to nearly 90% of days monitored with dolphins present. Having established these bays as important to the animals, in my second chapter I explored the many components of their resting bay soundscape and evaluated the influence of natural and human events on the soundscape. I characterized the overall soundscape in each of the four bays, used the tsunami event of March 2011 to approximate a natural soundscape and identified all loud daytime outliers. Overall, sound levels were consistently louder at night and quieter during the daytime due to the sounds from snapping shrimp. In fact, peak Hawaiian spinner dolphin resting time co-occurs with the quietest part of the day. However, I also found that humans drastically alter this daytime soundscape with sound from offshore aquaculture, vessel sound and military mid-frequency active sonar. During one recorded mid

Funding Opportunities in the Chesapeake Bay Watershed

EPA Pesticide Factsheets

This page provides links to financial assistance opportunities to help the Chesapeake Bay jurisdictions (Delaware, District of Columbia, Maryland, New York, Pennsylvania, Virginia, and West Virginia) restore the Chesapeake Bay.

33 CFR 117.1101 - Sturgeon Bay.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sturgeon Bay. 117.1101 Section 117.1101 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The draw of the...

33 CFR 117.1101 - Sturgeon Bay.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Sturgeon Bay. 117.1101 Section 117.1101 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The draw of the...

Levi-Civita cylinders with fractional angular deficit

NASA Astrophysics Data System (ADS)

Krisch, J. P.; Glass, E. N.

2011-05-01

The angular deficit factor in the Levi-Civita vacuum metric has been parametrized using a Riemann-Liouville fractional integral. This introduces a new parameter into the general relativistic cylinder description, the fractional index α. When the fractional index is continued into the negative α region, new behavior is found in the Gott-Hiscock cylinder and in an Israel shell.

Distribution and mobility of copper, zinc and lead in plant-sediment systems of Quanzhou Bay estuary, China.

PubMed

Li, Yu-Hong; Hu, Hong-You; Liu, Jing-Chun; Wu, Gui-Lan

2010-03-01

The distribution, mobility and potential risks of Cu, Zn, and Pb in four typical plant-sediment co-systems of the Quanzhou Bay estuary wetland in southeast China were investigated using a sequential extraction procedure. The results show that the sediments were moderately or heavily contaminated with Zn and Pb in all four plant communities, and the plant-sediment systems could act as a sink for the heavy metals. In all investigated sediments, only a small proportion of measured heavy metals were distributed in exchangeable fraction and carbonate fraction, while the reducible fraction contained the highest amount of Zn and Pb of the total readily bioavailable fractions, and the oxidizable fraction exhibited a higher retention capacity for Zn and Cu, but lower for Pb. Alternanthera philoxeroides had the best ability to accumulate heavy metals among the four species. Phragmites communis was quite tolerant to Zn and Pb and had a good capability to transfer Zn and Pb. Aegiceras corniculatum seems to be effective in resisting heavy metal pollution, and therefore cannot serve as an indicator of contamination. The urgent need for many local enterprises is to carry out high-tech cleaner production to reduce the emission of pollutants and achieve a resource-economical and environment-friendly development.

Risk forewarning model for rice grain Cd pollution based on Bayes theory.

PubMed

Wu, Bo; Guo, Shuhai; Zhang, Lingyan; Li, Fengmei

2018-03-15

Cadmium (Cd) pollution of rice grain caused by Cd-contaminated soils is a common problem in southwest and central south China. In this study, utilizing the advantages of the Bayes classification statistical method, we established a risk forewarning model for rice grain Cd pollution, and put forward two parameters (the prior probability factor and data variability factor). The sensitivity analysis of the model parameters illustrated that sample size and standard deviation influenced the accuracy and applicable range of the model. The accuracy of the model was improved by the self-renewal of the model through adding the posterior data into the priori data. Furthermore, this method can be used to predict the risk probability of rice grain Cd pollution under similar soil environment, tillage and rice varietal conditions. The Bayes approach thus represents a feasible method for risk forewarning of heavy metals pollution of agricultural products caused by contaminated soils. Copyright © 2017 Elsevier B.V. All rights reserved.