Science.gov

Sample records for fractional bayes factor

  1. Bayes factors and multimodel inference

    USGS Publications Warehouse

    Link, W.A.; Barker, R.J.; Thomson, David L.; Cooch, Evan G.; Conroy, Michael J.

    2009-01-01

    Multimodel inference has two main themes: model selection, and model averaging. Model averaging is a means of making inference conditional on a model set, rather than on a selected model, allowing formal recognition of the uncertainty associated with model choice. The Bayesian paradigm provides a natural framework for model averaging, and provides a context for evaluation of the commonly used AIC weights. We review Bayesian multimodel inference, noting the importance of Bayes factors. Noting the sensitivity of Bayes factors to the choice of priors on parameters, we define and propose nonpreferential priors as offering a reasonable standard for objective multimodel inference.

  2. Seasonal export fluxes of size-fractionated particulate derived from polonium-210: A case study in Xiamen Bay

    NASA Astrophysics Data System (ADS)

    Yang, Weifeng; Huang, Yipu; Chen, Min; Qiu, Yusheng

    2010-03-01

    Size-fractionated 210Po and 210Pb, in the size fractions >0.4 μm, >2 μm and >10 μm, were examined to determine the seasonal variability of particulate fluxes in Xiamen Bay. Good correlations between 210Po and particulate organic carbon (POC) or non-Particulate Organic Matter (nPOM) suggested that 210Po can be used to trace the export fluxes of POC and nPOM. Both steady-state (SS) model and nSS model were used to evaluate fluxes of size-fractionated 210Po, results showed that nSS model was better than the SS model in coastal areas. Based on the nSS model, size-fractionated POC fluxes decreased with increasing particle size. For the particle size studied, maximum POC fluxes occurred in autumn, followed by spring, winter, and summer. Fluxes of nPOM were an order of magnitude higher than the corresponding size-fractionated POC fluxes. Differences between size-fractionated nPOM fluxes indicated that hydrodynamic conditions were the main factor regulating transportation of particulate out of the inner Bay. In winter most particulates, including >10 μm particles, were transported under the strongest hydrodynamic conditions. In contrast, only a fraction of the <2 μm particulates were transported from the inner Bay in spring. This study suggested that 210Po is a powerful tracer of seasonal particulate export in coastal seas.

  3. Default Bayes Factors for Model Selection in Regression

    ERIC Educational Resources Information Center

    Rouder, Jeffrey N.; Morey, Richard D.

    2012-01-01

    In this article, we present a Bayes factor solution for inference in multiple regression. Bayes factors are principled measures of the relative evidence from data for various models or positions, including models that embed null hypotheses. In this regard, they may be used to state positive evidence for a lack of an effect, which is not possible…

  4. Using Bayes factors for multi-factor, biometric authentication

    NASA Astrophysics Data System (ADS)

    Giffin, A.; Skufca, J. D.; Lao, P. A.

    2015-01-01

    Multi-factor/multi-modal authentication systems are becoming the de facto industry standard. Traditional methods typically use rates that are point estimates and lack a good measure of uncertainty. Additionally, multiple factors are typically fused together in an ad hoc manner. To be consistent, as well as to establish and make proper use of uncertainties, we use a Bayesian method that will update our estimates and uncertainties as new information presents itself. Our algorithm compares competing classes (such as genuine vs. imposter) using Bayes Factors (BF). The importance of this approach is that we not only accept or reject one model (class), but compare it to others to make a decision. We show using a Receiver Operating Characteristic (ROC) curve that using BF for determining class will always perform at least as well as the traditional combining of factors, such as a voting algorithm. As the uncertainty decreases, the BF result continues to exceed the traditional methods result.

  5. A Bayes factor meta-analysis of Bem's ESP claim.

    PubMed

    Rouder, Jeffrey N; Morey, Richard D

    2011-08-01

    In recent years, statisticians and psychologists have provided the critique that p-values do not capture the evidence afforded by data and are, consequently, ill suited for analysis in scientific endeavors. The issue is particular salient in the assessment of the recent evidence provided for ESP by Bem (2011) in the mainstream Journal of Personality and Social Psychology. Wagenmakers, Wetzels, Borsboom, and van der Maas (Journal of Personality and Social Psychology, 100, 426-432, 2011) have provided an alternative Bayes factor assessment of Bem's data, but their assessment was limited to examining each experiment in isolation. We show here that the variant of the Bayes factor employed by Wagenmakers et al. is inappropriate for making assessments across multiple experiments, and cannot be used to gain an accurate assessment of the total evidence in Bem's data. We develop a meta-analytic Bayes factor that describes how researchers should update their prior beliefs about the odds of hypotheses in light of data across several experiments. We find that the evidence that people can feel the future with neutral and erotic stimuli to be slight, with Bayes factors of 3.23 and 1.57, respectively. There is some evidence, however, for the hypothesis that people can feel the future with emotionally valenced nonerotic stimuli, with a Bayes factor of about 40. Although this value is certainly noteworthy, we believe it is orders of magnitude lower than what is required to overcome appropriate skepticism of ESP. PMID:21573926

  6. Molecular size fractions of bay leaf (Laurus nobilis) exhibit differentiated regulation of colorectal cancer cell growth in vitro.

    PubMed

    Bennett, Louise; Abeywardena, Mahinda; Burnard, Sharon; Forsyth, Santina; Head, Richard; King, Kerryn; Patten, Glen; Watkins, Peter; Williams, Roderick; Zabaras, Dimitrios; Lockett, Trevor

    2013-01-01

    Numerous in vitro studies using solvent or aqueous extracts of raw dietary plant material have demonstrated modulation of colon cancer cell growth and apoptosis and effects on immune and nonimmune pathways of inflammation. We have developed a generic, 3-staged food-compatible process involving heating for conversion of dietary plants into food ingredients and report results on potential colon cancer-regulating properties of processed forms of Bay leaf (Laurus nobilis). In vitro studies demonstrated inhibition of cancer cell growth by processed Bay leaf products in HT-29, HCT-116, Caco-2, and SW-480 human cancer cell lines, which were accompanied by variable levels of elevated apoptosis. Bay leaf also exerted moderate inhibition of cycloxygenase 2 and 5 lipoxygenase enzymatic activity. In addition, these extracts significantly downregulated interferon-γ production in T helper Type 1-stimulated whole blood from healthy donors. Furthermore, size fractionation of the extracts revealed that antiproliferative and proapoptotic activities were associated with low mass (primarily polyphenolics and essential oils) and high mass (primarily proteins including polyphenol oxidase) chemical classes, respectively. Bay leaf exerted in vitro bioactivity that might be relevant to protecting against early events in sporadic colorectal cancer, with potential for further optimization of bioactivity by size-based fractionation. PMID:23859043

  7. Molecular size fractions of bay leaf (Laurus nobilis) exhibit differentiated regulation of colorectal cancer cell growth in vitro.

    PubMed

    Bennett, Louise; Abeywardena, Mahinda; Burnard, Sharon; Forsyth, Santina; Head, Richard; King, Kerryn; Patten, Glen; Watkins, Peter; Williams, Roderick; Zabaras, Dimitrios; Lockett, Trevor

    2013-01-01

    Numerous in vitro studies using solvent or aqueous extracts of raw dietary plant material have demonstrated modulation of colon cancer cell growth and apoptosis and effects on immune and nonimmune pathways of inflammation. We have developed a generic, 3-staged food-compatible process involving heating for conversion of dietary plants into food ingredients and report results on potential colon cancer-regulating properties of processed forms of Bay leaf (Laurus nobilis). In vitro studies demonstrated inhibition of cancer cell growth by processed Bay leaf products in HT-29, HCT-116, Caco-2, and SW-480 human cancer cell lines, which were accompanied by variable levels of elevated apoptosis. Bay leaf also exerted moderate inhibition of cycloxygenase 2 and 5 lipoxygenase enzymatic activity. In addition, these extracts significantly downregulated interferon-γ production in T helper Type 1-stimulated whole blood from healthy donors. Furthermore, size fractionation of the extracts revealed that antiproliferative and proapoptotic activities were associated with low mass (primarily polyphenolics and essential oils) and high mass (primarily proteins including polyphenol oxidase) chemical classes, respectively. Bay leaf exerted in vitro bioactivity that might be relevant to protecting against early events in sporadic colorectal cancer, with potential for further optimization of bioactivity by size-based fractionation.

  8. Metal pollution in a contaminated bay: relationship between metal geochemical fractionation in sediments and accumulation in a polychaete.

    PubMed

    Fan, Wenhong; Xu, Zhizhen; Wang, Wen-Xiong

    2014-08-01

    Jinzhou Bay in Northern China has been seriously contaminated with metals due to the impacts of smelting activities. In this study, we investigated the relationship between metal accumulation in a deposit-feeding polychaete Neanthes japonica and metal concentration and geochemical fractionation (Cd, Cu, Pb, Zn and Ni) in sediments of Jinzhou Bay. Compared with the historical data, metals in the more mobile geochemical fraction (exchangeable and carbonate fractions) were gradually partitioned into the more stable fraction (Fe-Mn oxides) over time. Metal concentration and geochemical fractionation in sediment significantly affected metal bioavailability and accumulation in polychaetes, except for Ni. Metal accumulation in polychaetes was significantly influenced by Fe or Mn content, and to a lesser degree by organic matter. Prediction of metal bioaccumulation in polychaetes was greatly improved by normalizing metal concentrations to Mn content in sediment. The geochemical fractionation of metals in sediments including the exchangeable, organic matter and Fe-Mn oxides were important in controlling the sediment metal bioavailability to polychaetes.

  9. Factors controlling denitrification of mudflat sediments in Ariake Bay, Japan.

    PubMed

    Koriyama, M; Koga, A; Seguchi, M; Ishitani, T

    2016-02-01

    To investigate the seasonal variation of denitrification rate (DR) and clarify the controlling factors of denitrification in the mudflat sediments of Ariake Bay, we conducted field surveys biweekly each month from April 2006 to January 2008. NH4(+)-N porewater concentration increased from summer to autumn due to the organic material mineralization under higher sediment temperatures. The seasonal pattern of NH4 (+)-N flux between sediments and overlying water interface indicated that the mudflat sediments were a source of NH4(+)-N in summer. NO3(-)+NO2(-)-N porewater concentrations were low, ranging from 0.53 to 11.46 μM, and mudflat sediments were sinks of NO3(-)+NO2(-)-N throughout the year. The mean number of denitrifiers tended to increase in July-September (2188-75,057 MPN g(-1)) and to decrease in March-May (500-3740 MPN g(-1)). DR tended to increase in summer, ranging from 76.03 to 990.21 μmol m(-2) day(-1), and to decrease in winter, ranging from 25.01 to 206.07 μmol m(-2) day(-1). There was no significant correlation between DR and denitrifier number. Environmental factors influencing DR during the investigation period were determined by multiple regression analysis with the stepwise method. The results indicated that NO3(-)+NO2(-)-N flux was an important factor in denitrification of mudflat sediments in Ariake Bay. Denitrification was depended on nitrate diffusing from overlying water into sediments under reduced sediment conditions during summer-mid-autumn. On the other hand, in late autumn-winter at Eh>+200 mV and sediment temperature >10 °C, nitrate produced by sediment nitrification was thought to be denitrified subsequently; that is, the coupled nitrification-denitrification may have taken place in the upper layer of mudflat sediments. PMID:26780415

  10. What Are the Odds? A Practical Guide to Computing and Reporting Bayes Factors

    ERIC Educational Resources Information Center

    Jarosz, Andrew F.; Wiley, Jennifer

    2014-01-01

    The purpose of this paper is to provide an easy template for the inclusion of the Bayes factor in reporting experimental results, particularly as a recommendation for articles in the "Journal of Problem Solving." The Bayes factor provides information with a similar purpose to the "p"-value--to allow the researcher to make…

  11. Dynamics of REE accumulation and fractionation in the subcolloidal fraction of bottom sediments in the Razdol'naya River-Amur Bay section, Sea of Japan

    NASA Astrophysics Data System (ADS)

    Polyakov, D. M.

    2016-05-01

    The REE contents (La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu) are determined by atomic emission spectroscopy in the subcolloidal fraction of bottom sediments in the Razdol'naya River-Amur Bay section. The mean contents of lanthanides in soils and river bottom sediments (before the mixing zone) are calculated. The increase in REE content and the fractioning in the series from light to middle and heavy REE in sediments of different estuary zones (river, water mixing, and marine), with the latter related to flocculation, sorption on iron and manganese hydroxides, clay minerals (hydromica, smectites), and lifetime accumulation of marine plankton, are dtermined. Via extraction of 0.5 N sodium hydroxide solution, the content of lanthanides associated with humic substances of subcolloidal fraction from the Amur Bay sediments are determined: 1.3 to 8.2% of La; 1.1 to 11% of Ce; and 0.3 to 1.5 of Gd.

  12. Geochemical factors affecting PAH distribution in Chesapeake Bay sediments

    SciTech Connect

    Mitra, S.; Dickhut, R.M.; Kimbrough, K.

    1995-12-31

    Sediment/pore water distribution coefficients (K{sub d}s) of selected polycyclic aromatic hydrocarbons (PAHs) were examined with depth at two sites in the Elizabeth River, a tributary of the Chesapeake Bay, Virginia. Areas of the Elizabeth River have been historically extensively contaminated with PAHs. Varying trends in distribution coefficients were observed both across the range of molecular weights of the PAHs and with depth in the sediment. Linear relations between log K{sub d} and octanol-water partition coefficient (log K{sub ow}) were observed deep in the cores but not near the surface of the sediments. This phenomena indicates that PAH sediment/porewater distributions are not at equilibrium near the sediment-water interface. Moreover, down-core K{sub d}s decreased and were, in most cases, inversely related with fraction organic carbon. These data indicate that dissolved organic carbon (DOC) may play a potentially significant role in mobilizing sediment-associated organic contaminants. The extent to which DOC and other geochemical parameters such as total lipid extract (TLE) and BET surface area control K{sub d}s of PAHs, is under further investigation.

  13. BAY 11-7082, a nuclear factor-κB inhibitor, reduces inflammation and apoptosis in a rat cardiac ischemia-reperfusion injury model.

    PubMed

    Kim, Yong Sook; Kim, Ji Su; Kwon, Jin Sook; Jeong, Myung Ho; Cho, Jeong Gwan; Park, Jong Chun; Kang, Jung Chaee; Ahn, Youngkeun

    2010-01-01

    Despite development of therapeutic modalities, myocardial ischemia-reperfusion (I/R) injury remains an important cause of cardiac dysfunction. Multiple strategies exist experimentally, but few are clinically available. Nuclear factor kappa-B (NF-κB) is a key transcription factor in the inflammatory response and is implicated in I/R injury. We hypothesized that the NFκB inhibitor BAY 11-7082 (BAY) would decrease the extent of injury after myocardial I/R. Hypoxia-reoxygenation (H/R) was induced in rat neonatal cardiomyocytes with or without BAY pretreatment. NF-κB activation, vascular cell adhesion molecule (VCAM)-1, and monocyte chemoattractant protein (MCP)-1 were assayed by immunocytochemistry, Western blot or reverse transcriptase-polymerase chain reaction (RT-PCR). Sprague-Dawley rats (n = 7) were administered BAY (130 µg/kg) and I/R was induced by ligation of the left anterior descending artery (LAD) for 30 minutes followed by reperfusion. Infarct size was analyzed after 24 hours. At 2 weeks, echocardiography was performed to evaluate ventricular function and hearts were analyzed for fibrosis and apoptosis. BAY treatment inhibited NF-κB p65 activation, as well as VCAM-1 and MCP-1 expression induced by H/R in cardiomyocytes. Compared with control rats, BAY pretreated rats showed reduced infarct size. Echocardiograms demonstrated preserved systolic function as a fractional shortening in the BAY+I/R group (P < 0.05). Fibrosis was reduced in the BAY+I/R group (P < 0.05) and apoptosis was also reduced in the BAY+I/R group (P < 0.05).In the rat myocardial I/R injury model, BAY significantly reduced the infarct size, and preserved myocardial function. These data demonstrate that a currently available and well-tolerated inhibitor of NF-κB can decrease the risk of myocardial injury associated with I/R.

  14. Bayes factors based on robust TDT-type tests for family trio design.

    PubMed

    Yuan, Min; Pan, Xiaoqing; Yang, Yaning

    2015-06-01

    Adaptive transmission disequilibrium test (aTDT) and MAX3 test are two robust-efficient association tests for case-parent family trio data. Both tests incorporate information of common genetic models including recessive, additive and dominant models and are efficient in power and robust to genetic model specifications. The aTDT uses information of departure from Hardy-Weinberg disequilibrium to identify the potential genetic model underlying the data and then applies the corresponding TDT-type test, and the MAX3 test is defined as the maximum of the absolute value of three TDT-type tests under the three common genetic models. In this article, we propose three robust Bayes procedures, the aTDT based Bayes factor, MAX3 based Bayes factor and Bayes model averaging (BMA), for association analysis with case-parent trio design. The asymptotic distributions of aTDT under the null and alternative hypothesis are derived in order to calculate its Bayes factor. Extensive simulations show that the Bayes factors and the p-values of the corresponding tests are generally consistent and these Bayes factors are robust to genetic model specifications, especially so when the priors on the genetic models are equal. When equal priors are used for the underlying genetic models, the Bayes factor method based on aTDT is more powerful than those based on MAX3 and Bayes model averaging. When the prior placed a small (large) probability on the true model, the Bayes factor based on aTDT (BMA) is more powerful. Analysis of a simulation data about RA from GAW15 is presented to illustrate applications of the proposed methods. PMID:26030793

  15. Rare earth elements in intertidal sediments of Bohai Bay, China: concentration, fractionation and the influence of sediment texture.

    PubMed

    Zhang, Yong; Gao, Xuelu; Arthur Chen, Chen-Tung

    2014-07-01

    Surface sediments from intertidal Bohai Bay were assessed using a four-step sequential extraction procedure to determine their concentrations of rare earth elements (REEs) and the chemical forms in which those elements were present. The normalized ratios La/Gd and La/Yb showed that LREE contents were not significantly higher than the middle REEs or HREE contents. A negative Ce anomaly and positive Eu were observed in sand and silty sand sediments, whereas no significant Ce or Eu anomaly was found in clayey silt sediments. Residual fraction of REEs accounted for the majority of their total concentrations. Middle REEs were more easily leached than other REEs, especially in clayey silt sediment. REEs contents in the surface sediment from the intertidal Bohai Sea were consistent with data from the upper continental crust and China shallow sea sediments, indicating that they were generally unaffected by heavily anthropogenic effects from adjacent areas.

  16. Theoretical prediction for several important equilibrium Ge isotope fractionation factors

    NASA Astrophysics Data System (ADS)

    Tang, M.; Li, X.; Liu, Y.

    2008-12-01

    As a newly emerging field, the stable isotope geochemistry of germanium (Ge) needs basic equilibrium fractionation factors to explore its unknown world. In this study, the Ge isotope fractionations between systems including the aqueous Ge(OH)4 and GeO(OH)3- which are the dominant Ge species in seawater, the Ge-bearing organic complexes (e.g. Ge-catechol, Ge-oxalic acid and Ge-citric acid), the quartz- (or opal- ), albite-, K-feldspar- and olivine- like mineral structures are studied. It is the first time that some geologically important equilibrium Ge isotope fractionation factors are reported. Surprisingly, up to 5 per mil large isotopic fractionations between these Ge isotope systems are found at 25 degree. These results suggest a potentially broad application for the Ge isotope geochemistry. Our theoretical calculations are based on the Urey model (or Bigeleisen-Mayer equation) and high level quantum chemistry calculations. The B3LYP/6-311+G(d,p) level quantum chemistry method and the explicit solvent model ("water droplet" method) are used. Many different conformers are also used for the aqueous complexes in order to reduce the possible errors coming from the differences of configurations in solution. The accuracy of our calculation of the Ge isotopic fractionations is estimated about 0.2 per mil. Our results show quartz-like or opal-like structure can enrich most heavy Ge isotopes. Relative to quartz (or opal), some Ge isotopic fractionations are (at 25 C): quartz-organic Ge = 4-5,quartz-Ge(OH)4 =0.9,quartz-GeO(OH)3- =1.5,quartz-albite=0.6,quartz-K-feldspar=0.4 and quartz-olivine=3.9 per mil. The large fractionations between inorganic Ge complexes and organic Ge ones could be used to distinguish the possible bio-involving processes. Our results suggest a good explanation to the experimental observations of Siebert et al. (2006) and Rouxel et al. (2006) and provide important constraints to the study of Ge cycle in ocean.

  17. Chesapeake Bay recovery and factors affecting trends: Long-termmonitoring, indicators, and insights

    USGS Publications Warehouse

    Tango, Peter J.; Batiuk, Richard A.

    2016-01-01

    Monitoring the outcome of restoration efforts is the only way to identify the status of a recovery and the most effective management strategies. In this paper, we discuss Chesapeake Bay and watershed recovery and factors influencing water quality trends. For over 30 years, the Chesapeake Bay Program Partnership’s long-term tidal and watershed water quality monitoring networks have measured physical, chemical and biological parameters throughout the bay and its surrounding watershed underpinning an adaptive management process to drive ecosystem recovery. There are many natural and anthropogenic factors operating and interacting to affect the watershed and bay water quality recovery responses to management actions. Across habitats and indicators, the bay and its watershed continue to express a diverse spatial and temporal fabric of multiscale conditions, stressors and trends that show a range of health conditions and impairments, as well as evidence of progress and degradation. Recurrent independent reviews of the monitoring program have driven a culture of continued adaptation of the monitoring networks to reflect ever evolving management information needs. The adherence to bay and watershed-wide consistent monitoring protocols provides monitoring data supporting analyses and development of scientific syntheses that underpin indicator and model development, regulatory assessments, targeting of management actions, evaluation of management effectiveness, and directing of priorities and policies.

  18. Iron isotopic fractionation factor between magnetite and hydrous silicic melt

    NASA Astrophysics Data System (ADS)

    Huang, F.; Lundstrom, C. C.

    2006-12-01

    A "thermal migration" experiment was conducted in the piston cylinder to investigate the changes in composition of a wet andesitic bulk composition in a temperature gradient at 0.5 GPa. A homogeneous andesite powder (AGV-1 containing 4 wt.% H2O was sealed in a AuPd double capsule with the hot end at 950°C and the bottom end 350°C for 66 days. The charge changes from 100% melt at the top to the progressively more crystalline with the sequential appearance of apatite, magnetite, amphibole, biotite, plagioclase, quartz, and K-feldspar. We microdrilled 5 samples along the temperature gradient and analyzed these for Fe isotope ratios by double spike MC-ICP-MS at UIUC. Results show that the 100% melt area is depleted in heavy Fe isotopes relative to all more crystalline portions of the experiment (4 samples) with the offset in {δ}^{56/54}FeIRMM of about 1.7‰. This does not appear to reflect Fe loss in the experiment as the Fe content and isotopes mass balance and no detectable Fe was found in the capsule after the experiment. Instead the offset is interpreted to reflect the combination of diffusive fractionation of Fe moving by diffusion and possible equilibrium fractionations between melt and magnetite that occurs throughout the crystalline portion of the experiment. However, both the isotopic fractionation factor between magnetite and melt and the effect of diffusion on Fe isotopes remains unknown. We are currently investigating Fe isotopic fractionation factor between magnetite and melt and effects of melt diffusion on Fe isotopes. To assess diffusion, we will microdrill and analyze melt-melt diffusion couples from Lundstrom(G-Cubed, 2003). To assess magnetite-melt fractionation, we have begun piston cylinder experiments at 0.5 GPa and 800°C using a starting material synthesized based on the melt composition within the thermal migration experiment. Initial experiments produce a layer of 100% melt on top of a 2-phase mush of magnetite-melt. This will allow

  19. DESICCATION AND OTHER FACTORS AFFECTING THE UPPER INTERTIDAL DISTRIBUTION OF EELGRASS IN YAQUINA BAY, OR

    EPA Science Inventory

    Eelgrass (Zostera marina) in Pacific Northwest is primarily intertidal, yet little research has been done on what factors control its upper intertidal growth boundary. In July 2000 a two year study was initiated in Yaquina Bay (Newport, OR) to evaluate the effects of four factor...

  20. Factors Controlling Tidal Flat Morphology in South San Francisco Bay

    NASA Astrophysics Data System (ADS)

    Bearman, J. A.; Foxgrover, A.; Friedrichs, C.; Jaffe, B.

    2006-12-01

    Since the 1850's, the San Francisco Bay has been subjected to a wide array of human-induced change. From the time of the first US Coast and Geodetic Survey bathymetric surveys in 1858, the saltmarshes and mudflats of South San Francisco Bay (SSFB) have decreased in area by 80% and 40%, respectively. Much of the saltmarsh loss was due to salt pond leveeing, while mudflat loss can be related to lack of sediment input, wind-wave erosion, and sea level rise. Plans for marsh restoration include breaching of salt pond levees with the goal of restoring the 15,100 acres of acquired ponds to tidal marsh the largest such restoration in the western US. The effect this would have upon the adjacent mudflats is unclear. In this analysis, the tidal flats of SSFB are broken into geographically similar regions and multiple cross-sections are drawn from mean high water to below mean lower low water at close intervals, allowing for a mean tidal flat bathymetric profile to be determined for each segment and for each time period 1858, 1898, 1931, 1956, 1983, 2005. Eigenfunction analysis is used to separate the spatial and temporal changes in profile shape into the dominant components of variability, allowing evaluation of the behavior of mudflats relative to spatially and temporally-varying forcings. The components of bathymetric variability derived from objective statistical analysis are compared to theoretical models for tidal flat profiles as a function of waves, tides and sediment supply. Theoretical models predict that wave-dominated or sediment-starved flats tend to have concave-upwards bathymetric profiles, whereas tide-dominated or accretionary flats tend to have convex-upwards bathymetric profiles. Initial results from an analysis of the 1980's bathymetry data suggest the South Bay mudflats can be broken into three morphologically distinct sections: 1) concave-up, erosional mudflats in the Eastern zone, which is most subject to wind waves; 2) convex-up, accretionary flats in

  1. Environmental Factors Shape Sediment Anammox Bacterial Communities in Hypernutrified Jiaozhou Bay, China▿ †

    PubMed Central

    Dang, Hongyue; Chen, Ruipeng; Wang, Lin; Guo, Lizhong; Chen, Pingping; Tang, Zuwang; Tian, Fang; Li, Shaozheng; Klotz, Martin G.

    2010-01-01

    Bacterial anaerobic ammonium oxidation (anammox) is an important process in the marine nitrogen cycle. Because ongoing eutrophication of coastal bays contributes significantly to the formation of low-oxygen zones, monitoring of the anammox bacterial community offers a unique opportunity for assessment of anthropogenic perturbations in these environments. The current study used targeting of 16S rRNA and hzo genes to characterize the composition and structure of the anammox bacterial community in the sediments of the eutrophic Jiaozhou Bay, thereby unraveling their diversity, abundance, and distribution. Abundance and distribution of hzo genes revealed a greater taxonomic diversity in Jiaozhou Bay, including several novel clades of anammox bacteria. In contrast, the targeting of 16S rRNA genes verified the presence of only “Candidatus Scalindua,” albeit with a high microdiversity. The genus “Ca. Scalindua” comprised the apparent majority of active sediment anammox bacteria. Multivariate statistical analyses indicated a heterogeneous distribution of the anammox bacterial assemblages in Jiaozhou Bay. Of all environmental parameters investigated, sediment organic C/organic N (OrgC/OrgN), nitrite concentration, and sediment median grain size were found to impact the composition, structure, and distribution of the sediment anammox bacterial community. Analysis of Pearson correlations between environmental factors and abundance of 16S rRNA and hzo genes as determined by fluorescent real-time PCR suggests that the local nitrite concentration is the key regulator of the abundance of anammox bacteria in Jiaozhou Bay sediments. PMID:20833786

  2. Spatial distribution and controlling factors of sedimentary bodies in Jiaozhou Bay and Adjacent Sea Areas, Qingdao

    NASA Astrophysics Data System (ADS)

    Dong, Heping; Li, Guangxue; Li, Shuanglin; Li, Shaoquan; Li, Chun

    2011-06-01

    The distributions of thickness of unconsolidated Quaternary sedimentary layers in Jiaozhou Bay and Qingdao offshore area were studied by using 1079-km high-resolution shallow seismic profiles and drilling core data, and the factors controlling the Quaternary evolution were discussed. The results show that such thickness distributions resulted from the coactions of geologic structures and marine hydrodynamic conditions since the Holocene. The geologic structures controlled the slope deposit, proluvial and fluvial fillings since the late Pleistocene. Holocene marine hydrodynamics eroded away sediments at the bay mouth, and tides carried these eroded materials to the sides of the bay mouth and released them there, forming channel-ridge-alternating geomorphic features. During transgressive processes, the sea level rose rapidly, and insufficient sediment supply and tidal actions yielded the relict sediments in the east of Qingdao offshore area.

  3. [Distribution, seasonal variation and influence factors of dissolved inorganic arsenic in the Sanggou Bay].

    PubMed

    Li, Lei; Ren, Jing-Ling; Liu, Su-Mei; Jiang, Zeng-Jie; Du, Jin-Zhou; Fang, Jian-Guang

    2014-07-01

    The biogeochemical behavior of arsenic in the aquatic environment has already captured the attentions of scientists due to its complex forms and toxicity. Four cruises were carried out in April, August, October 2011 and January 2012 in the Sanggou Bay. The concentrations of total dissolved inorganic arsenic (TDIAs, TDIAs = [ As(5+] + [As(3+)]) and arsenite (As(3+)) were measured by Hydride Generation-Atomic Fluorescence Spectrometry (HG-AFS). The concentrations of TDIAs ranged from 3.4-12.4 nmol x L(-1) in April, 8.9-16.9 nmol x L(-1) in August, 14.7-21.3 nmol x L(-1) in October and 13.8-21.9 nmol x L(-1) in January. The concentrations of arsenite ranged from 0.3-2.1 nmol x L(-1), 0.4-3.8 nmol x L(-1), 1.8-4.0 nmol x L(-1) and 0.3-2.9 nmol x L(-1) during four cruises, respectively. The concentrations of TDIAs in spring and summer were lower than those in autumn and winter, and high values of TDIAs appeared in the bay-mouth and the coastal estuary. The concentrations of arsenite in spring and winter were lower than those in summer and autumn. The maximum As(3+)/TDIAs ratios appeared in summer. The mean value of TDIAs in the Sanggou Bay was (13.9 +/- 4.7) nmol x L(-1), which was lower than the national primary drinking in water Standards from USEPA and met the first grade water quality based on the environmental quality standards for surface water of China. It indicates that there is no obvious anthropogenic pollution. The concentrations of TDIAs in the Sanggou Bay were lower than those in the Ailian Bay and the Lidao Bay in spring and summer due to the different hydrological environments and terrestrial inputs. Riverine input, incursion of Yellow Sea and biological activities were the three main factors impacting the distribution of TDIAs in the Sanggou Bay, and the influence of aquaculture activities was particularly significant. The enrichment of arsenic by aquaculture may lead to potential ecological crisis and food safety problems, and need to be paid more

  4. [Distribution, seasonal variation and influence factors of dissolved inorganic arsenic in the Sanggou Bay].

    PubMed

    Li, Lei; Ren, Jing-Ling; Liu, Su-Mei; Jiang, Zeng-Jie; Du, Jin-Zhou; Fang, Jian-Guang

    2014-07-01

    The biogeochemical behavior of arsenic in the aquatic environment has already captured the attentions of scientists due to its complex forms and toxicity. Four cruises were carried out in April, August, October 2011 and January 2012 in the Sanggou Bay. The concentrations of total dissolved inorganic arsenic (TDIAs, TDIAs = [ As(5+] + [As(3+)]) and arsenite (As(3+)) were measured by Hydride Generation-Atomic Fluorescence Spectrometry (HG-AFS). The concentrations of TDIAs ranged from 3.4-12.4 nmol x L(-1) in April, 8.9-16.9 nmol x L(-1) in August, 14.7-21.3 nmol x L(-1) in October and 13.8-21.9 nmol x L(-1) in January. The concentrations of arsenite ranged from 0.3-2.1 nmol x L(-1), 0.4-3.8 nmol x L(-1), 1.8-4.0 nmol x L(-1) and 0.3-2.9 nmol x L(-1) during four cruises, respectively. The concentrations of TDIAs in spring and summer were lower than those in autumn and winter, and high values of TDIAs appeared in the bay-mouth and the coastal estuary. The concentrations of arsenite in spring and winter were lower than those in summer and autumn. The maximum As(3+)/TDIAs ratios appeared in summer. The mean value of TDIAs in the Sanggou Bay was (13.9 +/- 4.7) nmol x L(-1), which was lower than the national primary drinking in water Standards from USEPA and met the first grade water quality based on the environmental quality standards for surface water of China. It indicates that there is no obvious anthropogenic pollution. The concentrations of TDIAs in the Sanggou Bay were lower than those in the Ailian Bay and the Lidao Bay in spring and summer due to the different hydrological environments and terrestrial inputs. Riverine input, incursion of Yellow Sea and biological activities were the three main factors impacting the distribution of TDIAs in the Sanggou Bay, and the influence of aquaculture activities was particularly significant. The enrichment of arsenic by aquaculture may lead to potential ecological crisis and food safety problems, and need to be paid more

  5. Factors Influencing Spatial and Annual Variability in Eelgrass (Zostera marina L.) Meadows in Willapa Bay, Washington, and Coos Bay, Oregon, Estuaries

    SciTech Connect

    Thom, Ronald M.; Borde, Amy B.; Rumrill, Steven; Woodruff, Dana L.; Williams, Greg D.; Southard, John A.; Sargeant, Susan L.

    2003-08-01

    Environmental factors that influence annual variability and spatial differences in eelgrass meadows (Zostera marina L.) were examined within Willapa Bay, WA, and Coos Bay, OR, over a period of 4 years (1998-2001). A suite of eelgrass metrics were recorded annually at field sites that spanned the estuarine gradient from the marine-dominated to mesohaline regions. Growth of eelgrass plants was also monitored on a monthly basis within Sequim Bay, WA. Both the spatial cover and density of Z. marina were positively correlated with estuarine salinity and inversely correlated with temperature of the tideflat sediment. Experimental evidence verified that optimal eelgrass growth occurred at highest salinities and relatively low temperatures. Eelgrass density, biomass, and the incident of flowering plants all increased substantially in Willapa Bay, and less so in Coos Bay, over the duration of the study. Warmer winters and cooler summers associated with the transition from El Ni?o to La Ni?a ocean conditions during the study period were correlated with the increase in eelgrass abundance and flowering. Anthropogenic factors (e.g., disturbance and erosion by vessel wakes and recreational shellfishing activities) may have contributed to spatial variability. Our findings indicate that large-scale changes in climate and nearshore ocean conditions can exert a strong regional influence on eelgrass abundance, which can vary annually by as much as 700% in Willapa Bay. Lower levels of variability observed in Coos Bay may be due to the stronger and more direct influence of the nearshore Pacific Ocean. We conclude that climate variation may have profound effects on the abundance and distribution of eelgrass meadows throughout the Pacific Northwest, and we anticipate that ocean conditions will emerge as a primary driving force for living estuarine resources and ecological processes that are associated with Z. marina beds within the landscape of these estuarine tidal basins.

  6. Moving in Parallel Toward a Modern Modeling Epistemology: Bayes Factors and Frequentist Modeling Methods.

    PubMed

    Rodgers, Joseph Lee

    2016-01-01

    The Bayesian-frequentist debate typically portrays these statistical perspectives as opposing views. However, both Bayesian and frequentist statisticians have expanded their epistemological basis away from a singular focus on the null hypothesis, to a broader perspective involving the development and comparison of competing statistical/mathematical models. For frequentists, statistical developments such as structural equation modeling and multilevel modeling have facilitated this transition. For Bayesians, the Bayes factor has facilitated this transition. The Bayes factor is treated in articles within this issue of Multivariate Behavioral Research. The current presentation provides brief commentary on those articles and more extended discussion of the transition toward a modern modeling epistemology. In certain respects, Bayesians and frequentists share common goals.

  7. Factors affecting suspended-solids concentrations in South San Francisco Bay, California

    USGS Publications Warehouse

    Schoellhamer, D.H.

    1996-01-01

    Measurements of suspended-solids concentration (SSC) were made at two depths at three sites in South San Francisco Bay (South Bay) to determine the factors that affect SSC. Twenty-eight segments of reliable and continuous SSC time series data longer than 14 days were collected from late 1991 or 1992 through September 1993. Spectral analysis and singular spectrum analysis were used to relate these data segments to time series of several potential forcing factors, including diurnal and semidiurnal tides, the spring-neap tidal cycle, wind shear, freshwater runoff, and longitudinal density differences. SSC is greatest during summer when a landward wind shear is applied to South Bay by the afternoon sea breeze. About one half the variance of SSC is caused by the spring-neap cycle, and SSC lags the spring-neap cycle by about 2 days. Relatively short duration of slack water limits the duration of deposition of suspended solids and consolidation of newly deposited bed sediment during the tidal cycle, so suspended solids accumulate in the water column as a spring tide is approached and slowly deposit as a neap tide is approached. Perturbations in SSC caused by wind and local runoff from winter storms during the study period were usually much smaller than SSC variations caused by the spring-neap cycle. Variations of SSC at the study sites at tidal timescales are tidally forced, and nonlinear physical processes are significant. Advective transport dominates during spring tides when water with higher SSC due to wind wave resuspension is advected to the main channel from shallow water, but during neap tides, advective transport is less significant. The findings of this and other studies indicate that the tidally averaged transport of suspended solids responds to seasonal variations of wind shear in South Bay.

  8. Factors affecting herbicide yields in the Chesapeake Bay watershed, June 1994

    USGS Publications Warehouse

    Hainly, R.A.; Kahn, J.M.

    1996-01-01

    Median concentrations and instantaneous yields of alachlor, metolachlor, atrazine, cyanazine, and simazine were generally highest at sites in the Lower Susquehanna River Basin and in agricultural subbasins. Instantaneous herbicide yields are related to land use, hydrogeologic setting, streamflow yield, and agricultural row cropping practices. The significance of these relations may be affected by the interdependence of the factors. The percentage of basin area planted in corn is the most influential factor in the prediction of herbicide yield. Instantaneous yields of all five herbicides measured in June 1994 related poorly to averaged 199094 herbicide use. Annually averaged herbicide-use data are too general to use as a predictor for short-term herbicide yields. An evaluation of factors affecting herbicide yields could be refined with more-current land use and land cover information and a more accurate estimate of the percentage of basin area planted in corn. Factors related to herbicide yields can be used to predict herbicide yields in other basins within the Chesapeake Bay watershed and to develop an estimate of herbicide loads to Chesapeake Bay.Median concentrations and instantaneous yields of alachlor, metolachlor, atrazine, cyanazine, and simazine were generally highest at sites in the Lower Susquehanna River Basin and in agricultural subbasins. Instantaneous herbicide yields are related to land use, hydrogeologic setting, streamflow yield, and agricultural row cropping practices. The significance of these relations may be affected by the interdependence of the factors. The percentage of basin area planted in corn is the most influential factor in the prediction of herbicide yield. Instantaneous yields of all five herbicides measured in June 1994 related poorly to averaged 1990-94 herbicide use. Annually averaged herbicide-use data are too general to use as a predictor for short-term herbicide yields. An evaluation of factors affecting herbicide yields could

  9. Factors affecting nutrient trends in major rivers of the Chesapeake Bay Watershed

    USGS Publications Warehouse

    Sprague, Lori A.; Langland, M.J.; Yochum, S.E.; Edwards, R.E.; Blomquist, J.D.; Phillips, S.W.; Shenk, G.W.; Preston, S.D.

    2000-01-01

    Trends in nutrient loads and flow-adjusted concentrations in the major rivers entering Chesapeake Bay were computed on the basis of water-quality data collected between 1985 and 1998 at 29 monitoring stations in the Susquehanna, Potomac, James, Rappahannock, York, Patuxent, and Choptank River Basins. Two computer models?the Chesapeake Bay Watershed Model (WSM) and the U.S. Geological Survey?s 'Spatially Referenced Regressions on Watershed attributes' (SPARROW) Model?were used to help explain the major factors affecting the trends. Results from WSM simulations provided information on temporal changes in contributions from major nutrient sources, and results from SPARROW model simulations provided spatial detail on the distribution of nutrient yields in these basins. Additional data on nutrient sources, basin characteristics, implementation of management practices, and ground-water inputs to surface water were analyzed to help explain the trends. The major factors affecting the trends were changes in nutrient sources and natural variations in streamflow. The dominant source of nitrogen and phosphorus from 1985 to 1998 in six of the seven tributary basins to Chesapeake Bay was determined to be agriculture. Because of the predominance of agricultural inputs, changes in agricultural nutrient sources such as manure and fertilizer, combined with decreases in agricultural acreage and implementation of best management practices (BMPs), had the greatest impact on the trends in flow-adjusted nutrient concentrations. Urban acreage and population, however, were noted to be increasing throughout the Chesapeake Bay Watershed, and as a result, delivered loads of nutrients from urban areas increased during the study period. Overall, agricultural nutrient management, in combination with load decreases from point sources due to facility upgrades and the phosphate detergent ban, led to downward trends in flow-adjusted nutrient concentrations atmany of the monitoring stations in the

  10. Prevalence of porcine cysticercosis and associated risk factors in Homa Bay District, Kenya

    PubMed Central

    2012-01-01

    Background Taenia solium is an important zoonosis in many developing countries. Cysticercosis poses a serious public health risk and leads to economic losses to the pig production industry. Due to scarcity of data on the epidemiology of porcine cysticercosis in Kenya, the present study was conducted to determine the prevalence and risk factors for porcine cysticercosis within Homa Bay district. A cross-sectional survey was carried out in 2010, and a total of 392 pigs were recruited in a household survey, with all being tested by ante-mortem lingual palpation (together with questionnaire data on pig production, occurrence and transmission of porcine cysticercosis, risk factors and awareness of porcine cysticercosis collected from the households from which pigs were sampled). Sufficient serum was collected from 232 of the pigs to be tested for the presence of circulating parasite antigen using a monoclonal antibody-based sandwich enzyme-linked immunosorbent assay (Ag-ELISA). Results Seventy six pigs were found positive by the Ag-ELISA (32.8%, 95% C.I. 26.8-39.2%), while by tongue inspection cysticerci were detected in 22/ 392 pigs (5.6% 95% C.I. 3.6-8.4%). The most important risk factor for porcine cysticercosis in the Homa Bay area was for pigs to belong to a farm where latrine use by members of the household was not evident (OR = 1.9, 95% CI = 1.13–2.37). Conclusion The present findings indicate that porcine cysticercosis is endemic in Homa Bay District, and that latrine provision, in conjunction with free-range pig keeping contributes significantly to porcine cysticercosis transmission. PMID:23217158

  11. Using multiple sulfur isotopes to link biological isotope fractionation in a sedimentary protolith to a magmatic Ni-sulfide deposit: Voisey's Bay Ni deposit, Labrador, Canada

    NASA Astrophysics Data System (ADS)

    Hiebert, R. S.; Bekker, A.; Wing, B. A.

    2012-12-01

    It is generally accepted that crustal contamination is required for the formation of significant magmatic Ni-Cu-PGE sulfide deposits. Either the addition of external S or SiO2 promote early sulfide saturation. The most direct indicator of S addition by this contaminant is S isotopes. However, the traditional use of δ34S values is inadequate in deposits where Archean sedimentary sulfides incorporated into these deposits might not have significantly different δ34S values from those of mantle S. Even in sediments that have variable δ34S values, δ34S signature can be reset to magmatic values by equilibrating large amounts of silicate magma with initial sulfide melt. However, sedimentary rocks contain isotope evidence of biological fractionation processes in the relationship between δ33S and δ34S values. We used multiple S isotope data to constrain the relationship between δ33S and δ34S values, identify biological S isotope fractionation in the metamorphosed sedimentary rocks of the Tasiuyak Gneiss, and compare this relationship to that in the Voisey's Bay magmatic Ni-deposit. The Voisey's Bay Ni-sulfide deposit, Labrador is hosted by a troctolitic conduit system. The Voisey's Bay intrusion is a part of the Nain plutonic suite and intruded at approximately 1.3 Ga along the boundary between the Proterozoic Tasiuyak Gneiss of the Churchill province and Archean gneisses of the Nain province. The general model suggests assimilation of a large amount of sulfidic Tasiuyak gneiss, leading to sulfur saturation prior to emplacement, even though the Tasiuyak gneiss does not have a high concentration of sulfur. High-temperature equilibrium relationships are not present in our measured δ33S and δ34S values from the Voisey's Bay deposit. Instead they indicate that a kinetic process is responsible for S isotope fractionations in the mineralization and troctolite, similar to that recorded by the Tasiuyak gneiss. The observed relationship between δ33S and δ34S values is

  12. Factors controlling floc settling velocity within San Francisco Bay, USA and comparisons with parameterisation approaches

    NASA Astrophysics Data System (ADS)

    Manning, Andrew; Schoellhamer, David

    2014-05-01

    Much of the sediment within San Francisco Bay (SFB) is cohesive and can therefore act as transport mechanism for pollutants which adsorb to clay minerals. Furthermore, muddy sediment can flocculate when resuspended; this significantly alters their transport characteristics, which poses a serious complication to the modelling of sediment pathways. The aim of this research was to determine the factors that affect floc settling velocity along a longitudinal transect in an estuary. We collected and analysed data on flocs and on potential controlling factors along a 147 km transect the length of San Francisco Bay, USA, on June 17th, 2008. The INSSEV-LF video system, which includes the novel video-based LabSFLOC instrument (developed by Manning) was used to measure floc diameters and settling velocities at 30 stations at a height of 0.7 m above the estuary bed. Floc sizes (D) ranged from 22 microns to 639 microns settling velocities (Ws) ranged between 0.04 mm/s to 15.8 mm/s during the longitudinal transect. Nearbed turbulent shear stresses throughout the transect duration were within the 0.2-0.5 Pa range which typically stimulates flocculation growth. Individual D-Ws-floc density plots suggest the suspended sediments encountered throughout SFB were composed of both mud and mixed sediment flocs. The macroflocs and microflocs (demarcation at 160 microns) sub-populations demonstrated parameterised settling velocities which spanned nearly double the range of the sample mean settling velocities (Ws_mean spanned 0.6-6 mm/s). The macroflocs tended to dominate the suspended mass (up to 77% of the ambient suspended solids concentration; SSC) from San Pablo Bay through to Carquinez Strait (the vicinity of the turbidity maximum zone). Microfloc mass was particularly significant (typically 60-100% of the SSC) in the northern section of South Bay and most of Central Bay. During slack tide, larger and faster settling flocs deposited, accounting for most of the longitudinal

  13. [Zooplankton community structure in relation to influencing factors in different parts of Hangzhou Bay in autumn].

    PubMed

    Zhang, Dong-rong; Xu, Zhao-li; Xu, Jia-yi; Chen, Jia-jie

    2015-09-01

    Based on the data collected from three oceanographic surveys in the east area of north (30.68°-30.83° N,121.67°-121.87° E), the east area of south (29.95°-30.24° N,121.60°- 121.85° E), and the west area of north (30.58°--30.77° N,121.31°--121.56° E) Hangzhou Bay during the autumn of 2009, 2011 and 2012, we analyzed the species composition, ecological groups and the similarity of zooplankton community, as well as influencing factors. The results indicated that a total of 14 species belonging to 6 groups were identified in the west area of north Hangzhou Bay. Tortanus vermiculus was the predominant species. The zooplankton assembles were mainly influenced by the runoff strength of the Qiantang River. The zooplankton fauna was mainly composed of the subtropical estuarine brackish-water species, accounting for 79.8% in the total abundance. A total of 19 species belonging to 6 groups were identified in the east area of north Hangzhou Bay. The composition of zooplankton community was mainly influenced by the Changjiang diluted water and offshore water of the East China Sea. It was mainly composed of warm-temperature and subtropical nearshore low-salinity species, accounting for 43.5% and 31.1% in the total abundance, respectively. In the east area of south Hangzhou Bay, a total of 25 species belonging to 7 groups were identified. The composition of zooplankton community was mainly influenced by the offshore water of the East China Sea. The dominate eco-group types were subtropical nearshore low-salinity and subtropical nearshore species, accounting for 72.3% and 18.3% in the total abundance, respectively. And the ecological groups of species with the highest abundance was Labidocera sinilobata, accounting for 65.3% in the total abundance. By hierarchical cluster analysis and non-metric multidimensional scaling (NMDS) method, it was found that the zooplankton communities in the three parts of Hangzhou Bay were significantly different, which were closely

  14. Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution

    PubMed Central

    2013-01-01

    Background Accurate model comparison requires extensive computation times, especially for parameter-rich models of sequence evolution. In the Bayesian framework, model selection is typically performed through the evaluation of a Bayes factor, the ratio of two marginal likelihoods (one for each model). Recently introduced techniques to estimate (log) marginal likelihoods, such as path sampling and stepping-stone sampling, offer increased accuracy over the traditional harmonic mean estimator at an increased computational cost. Most often, each model’s marginal likelihood will be estimated individually, which leads the resulting Bayes factor to suffer from errors associated with each of these independent estimation processes. Results We here assess the original ‘model-switch’ path sampling approach for direct Bayes factor estimation in phylogenetics, as well as an extension that uses more samples, to construct a direct path between two competing models, thereby eliminating the need to calculate each model’s marginal likelihood independently. Further, we provide a competing Bayes factor estimator using an adaptation of the recently introduced stepping-stone sampling algorithm and set out to determine appropriate settings for accurately calculating such Bayes factors, with context-dependent evolutionary models as an example. While we show that modest efforts are required to roughly identify the increase in model fit, only drastically increased computation times ensure the accuracy needed to detect more subtle details of the evolutionary process. Conclusions We show that our adaptation of stepping-stone sampling for direct Bayes factor calculation outperforms the original path sampling approach as well as an extension that exploits more samples. Our proposed approach for Bayes factor estimation also has preferable statistical properties over the use of individual marginal likelihood estimates for both models under comparison. Assuming a sigmoid function to

  15. Soil and groundwater attenuation factors for nitrogen from septic systems in the Chesapeake Bay TMDL

    NASA Astrophysics Data System (ADS)

    Radcliffe, D. E.; Geza, M.; O'Drisoll, M.; Humphrey, C., Jr.

    2015-12-01

    An expert panel was tasked with estimating the percent of the nitrogen (N) load from septic systems that was lost in the flow path from a typical home to third-order streams as part of the Chesapeake Bay Total Maximum Daily Load (TMDL). These losses were referred to as attenuation factors. We developed values for the soil (unsaturated) zone and for the Piedmont and Coastal Plain groundwater zones. For the soil zone, we used the Soil Treatment Unit MODel (STUMOD) to estimate loses due to denitrification for all 12 soil textural classes and then averaged the results over three textural groups. Assuming hydraulic loading at the design rate and a conventional system, the attenuation factors were 16% for sand, loamy sand, sandy loam, and loam soils; 34% for silt loam, clay loam, sandy clay loam, silty clay loam, and silt soils; and 54% for sandy clay, silty clay, and clay soils. Attenuation factors increased in the more clayey soils due to wetter conditions and more losses due to denitrification. Attenuation factors were also developed for reduced hydraulic loading rates and for systems using advanced N pre-treatment. For the Piedmont groundwater zone, we used data from a recent study in Georgia of small suburban streams with high-density septic systems. Stream base-flow load was estimated using simultaneous measurements of total N concentration and discharge and compared to the estimated groundwater input load, resulting in an attenuation factor of 81%. For the Coastal Plain groundwater zone, literature values of groundwater N concentrations within septic system plumes in Virginia, North Carolina, and Florida were used to estimate an attenuation factor of approximately 60% at 100m downgradient from the drainfield. These attenuation factors will be used to estimate the contribution of N to the Chesapeake Bay in the Phase 6 TMDL models.

  16. Trophic accumulation of PSP toxins in zooplankton during Alexandrium fundyense blooms in Casco Bay, Gulf of Maine, April June 1998. I. Toxin levels in A. fundyense and zooplankton size fractions

    NASA Astrophysics Data System (ADS)

    Doucette, Gregory J.; Turner, Jefferson T.; Powell, Christine L.; Keafer, Bruce A.; Anderson, Donald M.

    2005-09-01

    The transfer of marine algal toxins involving a range of phytoplanktivorous vectors is well documented as a means of exposing organisms at higher trophic levels (including humans) to these naturally occurring yet harmful compounds. While previous studies have examined the potential for, and dynamics of, algal toxin accumulation by individual zooplankton species, few have attempted to distinguish the contribution of various grazer size classes to toxin trophic transfer in natural communities and characterize some of the factors that can influence this process. The current investigation was aimed at describing the size-fractioned (64-100, 100-200, 200-500, >500 μm) accumulation of paralytic shellfish poisoning (PSP) toxins by zooplankton in Casco Bay and the adjacent coastal waters of the Gulf of Maine during a series of cruises from April to June 1998. Several variables, including the abundance of PSP toxin-producing Alexandrium fundyense, in-water toxin concentrations associated with this dinoflagellate, and algal toxin cell quotas, were measured and their relationship to zooplankton toxin accumulation assessed. A principal finding of this work was the ability of any grazer size class examined (including grazers present in the 20-64 μm A. fundyense-containing fraction) to serve as an initial vector for introducing PSP toxins into the Casco Bay food web at various times during the sampling period, thereby providing multiple potential routes of toxin trophic transfer. In addition, trends observed in the coincident mapping of A. fundyense cells and their associated toxin were generally in agreement, yet did not remain closely coupled at all times. Therefore, although A. fundyense abundance can be a reasonable indicator of PSP toxin presence in the phytoplankton, this relationship can vary considerably and lead to situations where elevated toxin levels occur at low cell concentrations and vice versa. The uncoupling of A. fundyense cell and in-water toxin

  17. Jamaica Bay studies VII: Factors affecting the distribution and abundance of ducks in a New York estuary

    NASA Astrophysics Data System (ADS)

    Burger, Joanna; Trout, J. Richard; Wander, Wade; Ritter, Glenn S.

    1984-12-01

    The abundance and distribution of ducks (Anatini, Cairinini, Aythyini, Mergini, Oxyurini) were examined at Jamaica Bay Wildlife Refuge, a coastal estuary on Long Island, New York. The refuge contains a variety of tidal habitats as well two freshwater impoundments. The largest concentrations of diving ducks were present in March and April, and from October through December; while the largest concentrations of dabbling ducks were present from June through December. Thus, diving ducks used the refuge on migration whereas dabbling ducks used the refuge during and following the breeding season. Time of year was thus the most significant factor affecting distribution and abundance. Some species were present all year, including Black Duck Anas rubripes, Mallard A. platyrhynchos, Gadwall A. strepera, and Ruddy Duck Oxyura jamaicensis. Although both dabblers and divers used all areas of the bay, dabblers used both ponds while divers used only the East Pond. Dabbling ducks concentrated in the bay at low tide, and on the ponds at high tide. There were more divers on the bay on a falling tide although tide direction did not influence the abundance or distribution of dabblers. Temperature and wind variables influenced the distribution of all ducks: they used the bay at low temperatures, and rafted in large flocks on the bay in intermediate, Northwest winds. Only the numbers and distribution of dabblers were significantly influenced by cloud cover. We conclude that abiotic factors influence the abundance and distribution of ducks on Jamaica Bay Wildlife Refuge, and that tidal factors should be considered when managing migratory or wintering populations of ducks.

  18. Tracking polychlorinated biphenyls (PCBs) congener patterns in Newark Bay surface sediment using principal component analysis (PCA) and positive matrix factorization (PMF).

    PubMed

    Saba, Tarek; Su, Steave

    2013-09-15

    PCB congener data for Newark Bay surface sediments were analyzed using PCA and PMF, and relationships between the outcomes from these two techniques were explored. The PCA scores plot separated the Lower Passaic River Mouth samples from North Newark Bay, thus indicating dissimilarity. Although PCA was able to identify subareas in the Bay system with specific PCB congener patterns (e.g., higher chlorinated congeners in Elizabeth River), further conclusions reading potential PCB source profiles or potential upland source areas were not clear for the PCA scores plot. PMF identified five source factors, and explained the Bay sample congener profiles as a mix of these Factors. This PMF solution was equivalent to (1) defining an envelope that encompasses all samples on the PCA scores plot, (2) defining source factors that plot on that envelope, and (3) explaining the congener profile for each Bay sediment sample (inside the scores plot envelope) as a mix of factors. PMF analysis allowed identifying characteristic features in the source factor congener distributions that allowed tracking of source factors to shoreline areas where PCB inputs to the Bay may have originated. The combined analysis from PCA and PMF showed that direct discharges to the Bay are likely the dominant sources of PCBs to the sediment. Review of historical upland activities and regulatory files will be needed, in addition to the PCA and PMF analysis, to fully reconstruct the history of operations and PCB releases around the Newark Bay area that impacted the Bay sediment. PMID:23831929

  19. [Sensitivity evaluation and key sensitive factors identification of soil erosion around Hangzhou Bay based on RUSLE].

    PubMed

    Li, Cheng; Li, Jun-Xiang; Zhu, Fei-Ge; Cao, Lu; Chen, Zhu; Wu, Tong; Wu, Ming; Sun, Hai-Jing

    2009-07-01

    By using GIS and RS techniques and RUSLE, the rainfall erosivity (R), soil erodibility (K), vegetation and management factor (C), and slope length and steepness factor (LS) around Hangzhou Bay of Zhejiang Province, China were calculated to make a comprehensive sensitivity evaluation of soil erosion in the study area. In the meantime, the contribution of each natural factor, i. e., rainfall, soil texture, slope, and elevation, was analyzed, and a new approach, overlapping and ordering method, was developed to identify the key affecting factors in the given sensitive areas. In the study area, soil erosion was mainly at non-sensitive and low sensitive levels. The percentages of the areas with different soil erosion sensitivity varied with the strength of the affecting factors. Soil erosion sensitivity increased with increasing rainfall and slope, and the percentage of the area with high soil erosion sensitivity was the largest at elevation 200-500 meters. The overlapping and ordering method was a practicable approach in identifying the key affecting factors in given sensitive areas, being helpful to understand the mechanisms causing soil erosion.

  20. A nuclear factor-kappaB inhibitor BAY 11-7082 suppresses endothelin-1 production in cultured vascular endothelial cells.

    PubMed

    Ohkita, Mamoru; Takaoka, Masanori; Shiota, Yasuko; Nojiri, Rumi; Sugii, Masato; Matsumura, Yasuo

    2002-05-01

    BAY 11-7082, an inhibitor of nuclear factor-kappaB (NF-kappaB), which prevents a step of the phosphorylation of inhibitory protein IkappaB bound to NF-kappaB, suppressed basal and tumor necrosis factor (TNF)-alpha-induced prepro endothelin (ET)-1 mRNA expression and NF-kappaB activation in cultured vascular endothelial cells. BAY 11-7082 significantly decreased basal and TNF-alpha-induced ET-1 release from endothelial cells. These results indicate that the inhibition of NF-kappaB activation contributes to the suppressive effect of BAY 11-7082 on ET-1 gene expression and ET-1 release, thereby suggesting that NF-kappaB plays an important role in the regulation of ET-1 production.

  1. [Community structure of phytoplankton in Haizhou bay and adjacent waters and its relationships with environmental factors].

    PubMed

    Yang, Xiao-Gai; Xue, Ying; Zan, Xiao-Xiao; Ren, Yi-Ping

    2014-07-01

    Based on the data collected from four seasonal surveys in 2011 in Haizhou Bay and adjacent waters, community structure of phytoplankton was studied and their relationships with environmental factors were evaluated by canonical correlation analysis (CCA). A total of 113 phytoplankton species belonging to 3 phyla and 44 genera were collected, among which Bacillariophyta species were the most abundant species, which included 39 genera and 99 species, accounting for 87.6% of total taxa, followed by Pyrrophyta, which included 4 genera and 13 species, accounting for 11.5 percent of total taxa. And the least abundant species were Chrysophyta species, which had only 1 species belonging to 1 genus. Among these dominant species, Coscinodiscus and Chaetoceros were the dominant groups in Bacillariophyta, while Ceratium was the dominant group in Dinophyta, and the dominant species were Meuniera membranacea, Coscinodiscus subtilis var. subtilis, Eucampia zodiacus and Bacillaria paxillifera. There were obvious seasonal variations in the species composition and predominant species. The abundances of phytoplankton in all the stations ranged from 0.08 x 10(5) cells m(-3) to 108.48 x 10(5) cells x m(-3) in Haizhou Bay. The average annual density of phytoplankton was 10.71 x 10(5) cells x m(-3), being the highest in autumn (29.08 x 10(5) cells x m(-3)) and the lowest in summer (1.69 x 10(5) cells x m(-3)). The Shannon index, Pielou index and Margalef index of the phytoplankton community were higher in summer and autumn than in winter and spring. CCA suggested that the main factors affecting the phytoplankton community were sea surface temperature (SST), followed by nutrients (NO(3-)-N, PO4(3-)-P, SiO3(2-)-Si) and dissolved oxygen (DO). The abundances and distribution of some dominant species were closely related with these main factors.

  2. Picoplankton Bloom in Global South? A High Fraction of Aerobic Anoxygenic Phototrophic Bacteria in Metagenomes from a Coastal Bay (Arraial do Cabo—Brazil)

    PubMed Central

    Cuadrat, Rafael R. C.; Ferrera, Isabel; Grossart, Hans-Peter; Dávila, Alberto M. R.

    2016-01-01

    Abstract Marine habitats harbor a great diversity of microorganism from the three domains of life, only a small fraction of which can be cultivated. Metagenomic approaches are increasingly popular for addressing microbial diversity without culture, serving as sensitive and relatively unbiased methods for identifying and cataloging the diversity of nucleic acid sequences derived from organisms in environmental samples. Aerobic anoxygenic phototrophic bacteria (AAP) play important roles in carbon and energy cycling in aquatic systems. In oceans, those bacteria are widely distributed; however, their abundance and importance are still poorly understood. The aim of this study was to estimate abundance and diversity of AAPs in metagenomes from an upwelling affected coastal bay in Arraial do Cabo, Brazil, using in silico screening for the anoxygenic photosynthesis core genes. Metagenomes from the Global Ocean Sample Expedition (GOS) were screened for comparative purposes. AAPs were highly abundant in the free-living bacterial fraction from Arraial do Cabo: 23.88% of total bacterial cells, compared with 15% in the GOS dataset. Of the ten most AAP abundant samples from GOS, eight were collected close to the Equator where solar irradiation is high year-round. We were able to assign most retrieved sequences to phylo-groups, with a particularly high abundance of Roseobacter in Arraial do Cabo samples. The high abundance of AAP in this tropical bay may be related to the upwelling phenomenon and subsequent picoplankton bloom. These results suggest a link between upwelling and light abundance and demonstrate AAP even in oligotrophic tropical and subtropical environments. Longitudinal studies in the Arraial do Cabo region are warranted to understand the dynamics of AAP at different locations and seasons, and the ecological role of these unique bacteria for biogeochemical and energy cycling in the ocean. PMID:26871866

  3. Picoplankton Bloom in Global South? A High Fraction of Aerobic Anoxygenic Phototrophic Bacteria in Metagenomes from a Coastal Bay (Arraial do Cabo--Brazil).

    PubMed

    Cuadrat, Rafael R C; Ferrera, Isabel; Grossart, Hans-Peter; Dávila, Alberto M R

    2016-02-01

    Marine habitats harbor a great diversity of microorganism from the three domains of life, only a small fraction of which can be cultivated. Metagenomic approaches are increasingly popular for addressing microbial diversity without culture, serving as sensitive and relatively unbiased methods for identifying and cataloging the diversity of nucleic acid sequences derived from organisms in environmental samples. Aerobic anoxygenic phototrophic bacteria (AAP) play important roles in carbon and energy cycling in aquatic systems. In oceans, those bacteria are widely distributed; however, their abundance and importance are still poorly understood. The aim of this study was to estimate abundance and diversity of AAPs in metagenomes from an upwelling affected coastal bay in Arraial do Cabo, Brazil, using in silico screening for the anoxygenic photosynthesis core genes. Metagenomes from the Global Ocean Sample Expedition (GOS) were screened for comparative purposes. AAPs were highly abundant in the free-living bacterial fraction from Arraial do Cabo: 23.88% of total bacterial cells, compared with 15% in the GOS dataset. Of the ten most AAP abundant samples from GOS, eight were collected close to the Equator where solar irradiation is high year-round. We were able to assign most retrieved sequences to phylo-groups, with a particularly high abundance of Roseobacter in Arraial do Cabo samples. The high abundance of AAP in this tropical bay may be related to the upwelling phenomenon and subsequent picoplankton bloom. These results suggest a link between upwelling and light abundance and demonstrate AAP even in oligotrophic tropical and subtropical environments. Longitudinal studies in the Arraial do Cabo region are warranted to understand the dynamics of AAP at different locations and seasons, and the ecological role of these unique bacteria for biogeochemical and energy cycling in the ocean. PMID:26871866

  4. Mink biomagnification factors for dioxin-like compounds fed Saginaw Bay carp

    SciTech Connect

    Kubiak, T.J.; Tillitt, D.E.; Heaton, S.N.; Bursian, S.N.; Giesy, J.P.; Render, J.A.; Aulerich, R.J.

    1994-12-31

    Diets containing 0, 10, 20 and 40% Saginaw Bay carp were fed to ranch mink to assess reproductive effects. All carp diets adversely affected reproduction. The diets and livers of the adult mink at the end of the study were chemically analyzed for planar halogenated hydrocarbons (PHHS) that induce aryl hydrocarbon hydroxylase (AHH)/ethoxyresorufin o-deethylase (EROD). Biomagnification factors (BMFS) from diets to mink livers were calculated. AHH and EROD-active PCB congeners uniformly magnified across diets except for PCB 126, which had higher magnification at lowest carp and control diets. PCB and PCDF congener magnification ranged from incalculable to 60-fold higher and individual PCDDs ranged from incalculable to 165 times the diet. As expected from previous mammalian studies, 2378-TCDD magnified over an order of magnitude more than 2378-TCDF but by 4 to 5-fold less than 23478-PCDF. Based on dioxin equivalents theory and TEFS, PCB 126 ranked first in the liver residues of 2378-TCDD equivalents followed by PCB 105, 23478-PCDF and 2378-TCDD. Magnification factors allow for interpretation of relative exposure risks from certain wild forage species if wild mink liver concentrations are known. Conversely, knowledge of wild mink forage item concentrations allows for calculation of an estimated wild mink liver residue, when the concentration and dietary forage percentage are multiplied by the BMF. Therefore, BMFs can assist in the elucidation of relative risk of a population to these contaminants without necessarily having large numbers of mink samples, especially in habitats such as the Saginaw Bay area where mink and otter populations are presumed to be affected by high PHH contamination.

  5. A Bayes Factor Meta-Analysis of Recent Extrasensory Perception Experiments: Comment on Storm, Tressoldi, and Di Risio (2010)

    ERIC Educational Resources Information Center

    Rouder, Jeffrey N.; Morey, Richard D.; Province, Jordan M.

    2013-01-01

    Psi phenomena, such as mental telepathy, precognition, and clairvoyance, have garnered much recent attention. We reassess the evidence for psi effects from Storm, Tressoldi, and Di Risio's (2010) meta-analysis. Our analysis differs from Storm et al.'s in that we rely on Bayes factors, a Bayesian approach for stating the evidence from data for…

  6. RNA sequencing supports distinct reactive oxygen species-mediated pathways of apoptosis by high and low size mass fractions of Bay leaf (Lauris nobilis) in HT-29 cells.

    PubMed

    Rodd, Annabelle L; Ververis, Katherine; Sayakkarage, Dheeshana; Khan, Abdul W; Rafehi, Haloom; Ziemann, Mark; Loveridge, Shanon J; Lazarus, Ross; Kerr, Caroline; Lockett, Trevor; El-Osta, Assam; Karagiannis, Tom C; Bennett, Louise E

    2015-08-01

    Anti-proliferative and pro-apoptotic effects of Bay leaf (Laurus nobilis) in mammalian cancer and HT-29 adenocarcinoma cells have been previously attributed to effects of polyphenolic and essential oil chemical species. Recently, we demonstrated differentiated growth-regulating effects of high (HFBL) versus low molecular mass (LFBL) aqueous fractions of bay leaf and now confirm by comparative effects on gene expression, that HFBL and LFBL suppress HT-29 growth by distinct mechanisms. Induction of intra-cellular lesions including DNA strand breakage by extra-cellular HFBL, invoked the hypothesis that iron-mediated reactive oxygen species with capacity to penetrate cell membrane, were responsible for HFBL-mediated effects, supported by equivalent effects of HFBL in combination with γ radiation. Activities of HFBL and LFBL were interpreted to reflect differentiated responses to iron-mediated reactive oxygen species (ROS), occurring either outside or inside cells. In the presence of LFBL, apoptotic death was relatively delayed compared with HFBL. ROS production by LFBL mediated p53-dependent apoptosis and recovery was suppressed by promoting G1/S phase arrest and failure of cellular tight junctions. In comparison, intra-cellular anti-oxidant protection exerted by LFBL was absent for extra-cellular HFBL (likely polysaccharide-rich), which potentiated more rapid apoptosis by producing DNA double strand breaks. Differentiated effects on expression of genes regulating ROS defense and chromatic condensation by LFBL versus HFBL, were observed. The results support ferrous iron in cell culture systems and potentially in vivo, can invoke different extra-cellular versus intra-cellular ROS-mediated chemistries, that may be regulated by exogenous, including dietary species. PMID:26114728

  7. RNA sequencing supports distinct reactive oxygen species-mediated pathways of apoptosis by high and low size mass fractions of Bay leaf (Lauris nobilis) in HT-29 cells.

    PubMed

    Rodd, Annabelle L; Ververis, Katherine; Sayakkarage, Dheeshana; Khan, Abdul W; Rafehi, Haloom; Ziemann, Mark; Loveridge, Shanon J; Lazarus, Ross; Kerr, Caroline; Lockett, Trevor; El-Osta, Assam; Karagiannis, Tom C; Bennett, Louise E

    2015-08-01

    Anti-proliferative and pro-apoptotic effects of Bay leaf (Laurus nobilis) in mammalian cancer and HT-29 adenocarcinoma cells have been previously attributed to effects of polyphenolic and essential oil chemical species. Recently, we demonstrated differentiated growth-regulating effects of high (HFBL) versus low molecular mass (LFBL) aqueous fractions of bay leaf and now confirm by comparative effects on gene expression, that HFBL and LFBL suppress HT-29 growth by distinct mechanisms. Induction of intra-cellular lesions including DNA strand breakage by extra-cellular HFBL, invoked the hypothesis that iron-mediated reactive oxygen species with capacity to penetrate cell membrane, were responsible for HFBL-mediated effects, supported by equivalent effects of HFBL in combination with γ radiation. Activities of HFBL and LFBL were interpreted to reflect differentiated responses to iron-mediated reactive oxygen species (ROS), occurring either outside or inside cells. In the presence of LFBL, apoptotic death was relatively delayed compared with HFBL. ROS production by LFBL mediated p53-dependent apoptosis and recovery was suppressed by promoting G1/S phase arrest and failure of cellular tight junctions. In comparison, intra-cellular anti-oxidant protection exerted by LFBL was absent for extra-cellular HFBL (likely polysaccharide-rich), which potentiated more rapid apoptosis by producing DNA double strand breaks. Differentiated effects on expression of genes regulating ROS defense and chromatic condensation by LFBL versus HFBL, were observed. The results support ferrous iron in cell culture systems and potentially in vivo, can invoke different extra-cellular versus intra-cellular ROS-mediated chemistries, that may be regulated by exogenous, including dietary species.

  8. Carbon isotopic fractionation in macroalgae from Cádiz Bay (Southern Spain): Comparison with other bio-geographic regions

    NASA Astrophysics Data System (ADS)

    Mercado, Jesús M.; de los Santos, Carmen B.; Lucas Pérez-Lloréns, J.; Vergara, Juan J.

    2009-11-01

    The 13C signature of forty-five macroalgal species from intertidal zones at Cádiz Bay was analysed in order to research the extension of diffusive vs. non-diffusive utilisation of dissolved inorganic carbon (DIC) and to perform a comparison with data published for other bio-geographic regions. The ∂ 13C values ranged from -6.8‰ to -33‰, although the span of variation was different depending on the taxa. Thus, ∂ 13C for Chlorophyta varied from -7‰ ( Codium adhaerens) to -29.6‰ ( Flabellia petiolata), while all the Phaeophyceae (excepting Padina pavonica with ∂ 13C higher than -10‰) had values between -10‰, and -20‰. The widest variation range was recorded in Rhodophyta, from values above -10‰ ( Liagora viscida) to values lower than -30‰ obtained in three species belonging to the subclass Rhodymeniophycidae. Accordingly, the mean ∂ 13C value calculated for red algae (-20.2‰) was significantly lower than that for brown (-15.9‰) and green algae (-15.6‰). Most of the analysed red algae were species inhabiting crevices and the low intertidal fringe which explains that, on average, the shaded-habitat species had a ∂ 13C value lower than those growing fully exposed to sun (i.e. in rockpools or at the upper intertidal zone). The comparison between the capacity for non-diffusive use of DIC (i.e. active or facilitated transport of HCO 3- and/or CO 2) and the ∂ 13C values reveals that values more negative than -30‰ indicate that photosynthesis is dependent on CO 2 diffusive entry, whereas values above this threshold would not indicate necessary the operation of a non-diffusive DIC transport mechanism. Furthermore, external carbonic anhydrase activity ( extCA) and ∂ 13C values were negatively correlated indicating that the higher the dependence of the photosynthesis on the CO 2 supplied from HCO 3- via extCA, the lower the ∂ 13C in the algal material. The comparison between the ∂ 13C values obtained for the analysed species and those

  9. Amelioration of oxygen and glucose deprivation-induced neuronal death by chloroform fraction of bay leaves (Laurus nobilis).

    PubMed

    Cho, Eun-Young; Lee, Sung-Jin; Nam, Kung-Woo; Shin, Jongheon; Oh, Ki-bong; Kim, Kyeong Ho; Mar, Woongchon

    2010-01-01

    The purpose of this study was to determine whether the Laurus nobilis chloroform fraction (LNCF) protects against cerebral ischemia neuronal damage. Human neuroblastoma SH-SY5Y cells and brain slices from rats were subjected to oxygen and glucose deprivation (OGD), followed by reoxgenation with and without LNCF. The viabilities of SH-SY5Y cells and brain slices from the rats were 58.5±4.9% and 79.7±5.9% in the group subjected to OGD, and 80.4±0.4% and 97.2±1.9% at 4 µg/ml of LNCF, respectively. LNCF also significantly inhibited death-associated protein kinase (DAPK) dephosphorylation. Pretreatment with LNCF at 4 mg/kg significantly decreased infarct size by 79% of vehicle control in the middle cerebral artery occlusion (MCAO) in vivo model. LNCF is a neuroprotective drug candidate against cerebral ischemia neuronal damage.

  10. Experimental determination of the Si isotope fractionation factor between liquid metal and liquid silicate

    NASA Astrophysics Data System (ADS)

    Hin, Remco C.; Fitoussi, Caroline; Schmidt, Max W.; Bourdon, Bernard

    2014-02-01

    The conditions of core formation and the abundances of the light elements in Earth's core remain debated. Silicon isotope fractionation provides a tool contributing to this subject. We present experimentally determined Si isotope fractionation factors between liquid metal and liquid silicate at 1450 °C and 1750 °C, which allow calibrating the temperature dependence of Si isotope fractionation. Experiments were performed in a centrifuging piston cylinder at 1 GPa, employing both graphite and MgO capsules. Tin was used to lower the melting temperature of the metal alloys for experiments performed at 1450 °C. Tests reveal that neither Sn nor C significantly affects Si isotope fractionation. An alkaline fusion technique was employed to dissolve silicate as well as metal phases prior to ion exchange chemistry and mass spectrometric analysis. The results show that metal is consistently enriched in light isotopes relative to the silicate, yielding average metal-silicate fractionation factors of -1.48±0.08‰ and -1.11±0.14‰ at 1450 °C and 1750 °C, respectively. The temperature dependence of equilibrium Si isotope fractionation between metal and silicate can thus be described as Δ30SiMetal-Silicate=-4.42(±0.05)×106/T2. The Si isotope equilibrium fractionation is thus about 1.7 times smaller than previously proposed on the basis of experiments. A consequence of this smaller fractionation is that the calculated difference between the Si isotope composition of the bulk Earth and that of the bulk silicate Earth generated by core formation is smaller than previously thought. It is therefore increasingly difficult to match the Si isotope composition of the bulk silicate Earth with that of chondrites for metal-silicate equilibration temperatures above ∼2500 K. This suggests that Si isotopes were more sensitive to the early stages of core formation when low oxygen fugacities allowed significant incorporation of Si into metal.

  11. Computing the Partial Fraction Decomposition of Rational Functions with Irreducible Quadratic Factors in the Denominators

    ERIC Educational Resources Information Center

    Man, Yiu-Kwong

    2012-01-01

    In this note, a new method for computing the partial fraction decomposition of rational functions with irreducible quadratic factors in the denominators is presented. This method involves polynomial divisions and substitutions only, without having to solve for the complex roots of the irreducible quadratic polynomial or to solve a system of linear…

  12. Structuring factors and recent changes in subtidal macrozoobenthic communities of a coastal lagoon, Arcachon Bay (France)

    NASA Astrophysics Data System (ADS)

    Blanchet, Hugues; de Montaudouin, Xavier; Chardy, Pierre; Bachelet, Guy

    2005-09-01

    Fourteen years after a previous investigation in Arcachon Bay (SW France), the quantitative distribution of subtidal macrozoobenthic communities was assessed in 2002 through a stratified sampling strategy involving a larger number of stations (89 vs. 18) than in 1988. A total of 226 taxa were recorded. Cluster Analysis and Correspondence Analysis identified nine station groups corresponding to benthic faunal assemblages and their characteristic species. Multiple Discriminant Analysis showed that the main environmental factors influencing the distribution of faunal assemblages were sediment parameters and distance from the ocean. Depth was a minor structuring factor. At the scale of the lagoon, biogenic structures such as Zostera marina beds, Crepidula fornicata-dominated bottoms or dead oyster shell bottoms did not display any particular assemblage of infauna. Comparison with previous quantitative data from the 1988 survey provided more precision on the distribution of benthic assemblages and revealed community changes at a 14-year scale. These modifications reflected a general increase of silt and clay content in the sediment in the internal parts of channels, inducing community change. These changes can be correlated to the recent first signs of a moderate eutrophication process which have appeared, since 1988, through the development of green macroalgae in some parts of the lagoon. This trend was enhanced in transverse channels with reduced hydrodynamics and led to muddy areas where green macroalgae tended to accumulate. Locally, the dredging of sandbanks induced stronger currents and allowed the marine influence to occur, and also induced community change. These observations confirm that surveys of macrobenthic communities are useful tools to assess coastal ecosystem change even in moderately disturbed environments.

  13. [Spatiotemporal distribution of macrobenthic communities and its relationships with environmental factors in Sanmen Bay].

    PubMed

    Liao, Yi-bo; Shou, Lu; Zeng, Jiang-ning; Gao, Ai-gen

    2011-09-01

    In November 2006 and in January, April, and August 2007, an investigation on the macrobenthic communities was conducted at 18 stations in Sanmen Bay to study the relationships between the macrobenthic communities and environmental factors. A total of 124 taxa were collected, including 44 species of Polychaeta, 34 species of Crustacea, 22 species of Mollusca, 11 species of Echinodermata, and 13 species of others. The species of Polychaeta and Mollusca accounted for 62.9% of the total, which constituted the main population of the communities. Aglaophamus dibranchis, Capitella capitata, and Sternaspis scutata were the dominant species in spring, Sternaspis scutata, Aglaophamus dibranchis, and Spionidae spp. were the dominant species in summer, S. scutata, C. capitata, A. dibranchis and Virgularia gustaviana were the dominant species in autumn, and A. dibranchis, S. scutata, C. capitata, and Spionidae spp. were the dominant species in winter. There was a significant difference in the average biomass and average density of the macrobenthic communities between different seasons. The annual average biomass was 17.36 g x m(-2) and the annual average density was 72 ind x m(-1). The diversity indices of the macrobenthic communities also differed significantly between different seasons. The seasonal average Shannon diversity index was from 1.53 to 1.89, seasonal average Margalef species richness index was from 2. 25 to 2. 96, and seasonal average Pielou evenness index was from 0.83 to 0.94. Canonical correspondence analysis showed that the sea water temperature, salinity, and dissolved inorganic nitrogen, and the organic matter, total nitrogen, and total phosphorus in surface sediment were the main environmental factors affecting the macrobenthic communities. Environmental variables could better explain the changes of main macrobenthic species.

  14. Cr isotope fractionation factors for Cr(VI) reduction by a metabolically diverse group of bacteria

    NASA Astrophysics Data System (ADS)

    Basu, Anirban; Johnson, Thomas M.; Sanford, Robert A.

    2014-10-01

    Reduction of Cr(VI) is an important process that determines the geochemical behavior, mobility and bioavailability of Cr in both terrestrial and marine environments. Many metabolically diverse microorganisms possess Cr(VI) reduction capacity. Cr(VI) reduction fractionates Cr isotopes and thus 53Cr/52Cr ratios can be used to monitor Cr(VI) reduction and redox conditions. The magnitude of isotopic fractionation (ε) for a variety of microbial reduction mechanisms must be known for accurate interpretation of observed shifts in 53Cr/52Cr ratios. We determined isotopic fractionation factors for Cr(VI) reduction by metal reducers Geobacter sulfurreducens and Shewanella sp. strain NR, a denitrifying soil bacterium Pseudomonas stutzeri DCP-Ps1, and a sulfate reducer Desulfovibrio vulgaris. All bacteria investigated in this study produced significant Cr isotope fractionation. The fractionation (ε) for G. sulfurreducens, Shewanella sp. (NR), P. stutzeri DCP-Ps1, and D. vulgaris were -3.03‰ ± 0.12‰, -2.17‰ ± 0.22‰, -3.14‰ ± 0.13‰, and -3.01‰ ± 0.11‰, respectively. Despite differences in microbial strains in this study, the ε did not vary significantly except for Shewanella sp. (NR). Our results suggest that strong isotopic fractionation is induced during Cr(VI) reduction under electron donor poor (∼300 μM) conditions.

  15. Effects of environmental and biotic factors on carbon isotopic fractionation during decomposition of soil organic matter

    PubMed Central

    Wang, Guoan; Jia, Yufu; Li, Wei

    2015-01-01

    Decomposition of soil organic matter (SOM) plays an important role in the global carbon cycle because the CO2 emitted from soil respiration is an important source of atmospheric CO2. Carbon isotopic fractionation occurs during SOM decomposition, which leads to 12C to enrich in the released CO2 while 13C to enrich in the residual SOM. Understanding the isotope fractionation has been demonstrated to be helpful for studying the global carbon cycle. Soil and litter samples were collected from soil profiles at 27 different sites located along a vertical transect from 1200 to 4500 m above sea level (a.s.l.) in the south-eastern side of the Tibetan Plateau. Their carbon isotope ratios, C and N concentrations were measured. In addition, fiber and lignin in litter samples were also analyzed. Carbon isotope fractionation factor (α) during SOM decomposition was estimated indirectly as the slope of the relationship between carbon isotope ratios of SOM and soil C concentrations. This study shows that litter quality and soil water play a significant role in isotope fractionation during SOM decomposition, and the carbon isotope fractionation factor, α, increases with litter quality and soil water content. However, we found that temperature had no significant impact on the α variance. PMID:26056012

  16. Effects of environmental and biotic factors on carbon isotopic fractionation during decomposition of soil organic matter.

    PubMed

    Wang, Guoan; Jia, Yufu; Li, Wei

    2015-06-09

    Decomposition of soil organic matter (SOM) plays an important role in the global carbon cycle because the CO2 emitted from soil respiration is an important source of atmospheric CO2. Carbon isotopic fractionation occurs during SOM decomposition, which leads to (12)C to enrich in the released CO2 while (13)C to enrich in the residual SOM. Understanding the isotope fractionation has been demonstrated to be helpful for studying the global carbon cycle. Soil and litter samples were collected from soil profiles at 27 different sites located along a vertical transect from 1200 to 4500 m above sea level (a.s.l.) in the south-eastern side of the Tibetan Plateau. Their carbon isotope ratios, C and N concentrations were measured. In addition, fiber and lignin in litter samples were also analyzed. Carbon isotope fractionation factor (α) during SOM decomposition was estimated indirectly as the slope of the relationship between carbon isotope ratios of SOM and soil C concentrations. This study shows that litter quality and soil water play a significant role in isotope fractionation during SOM decomposition, and the carbon isotope fractionation factor, α, increases with litter quality and soil water content. However, we found that temperature had no significant impact on the α variance.

  17. Effects of environmental and biotic factors on carbon isotopic fractionation during decomposition of soil organic matter.

    PubMed

    Wang, Guoan; Jia, Yufu; Li, Wei

    2015-01-01

    Decomposition of soil organic matter (SOM) plays an important role in the global carbon cycle because the CO2 emitted from soil respiration is an important source of atmospheric CO2. Carbon isotopic fractionation occurs during SOM decomposition, which leads to (12)C to enrich in the released CO2 while (13)C to enrich in the residual SOM. Understanding the isotope fractionation has been demonstrated to be helpful for studying the global carbon cycle. Soil and litter samples were collected from soil profiles at 27 different sites located along a vertical transect from 1200 to 4500 m above sea level (a.s.l.) in the south-eastern side of the Tibetan Plateau. Their carbon isotope ratios, C and N concentrations were measured. In addition, fiber and lignin in litter samples were also analyzed. Carbon isotope fractionation factor (α) during SOM decomposition was estimated indirectly as the slope of the relationship between carbon isotope ratios of SOM and soil C concentrations. This study shows that litter quality and soil water play a significant role in isotope fractionation during SOM decomposition, and the carbon isotope fractionation factor, α, increases with litter quality and soil water content. However, we found that temperature had no significant impact on the α variance. PMID:26056012

  18. Review of factors affecting the distribution and abundance of waterfowl in shallow-water habitats of Chesapeake Bay

    USGS Publications Warehouse

    Perry, M.C.; Deller, A.S.

    1996-01-01

    Long-term trends of waterfowl populations in Chesapeake Bay demonstrate the importance of shallow-water habitats for waterfowl species. Although recent increases in field feeding by geese and swans lessened the importance of shallow-water areas for these species, most duck species depend almost exclusively on shallow-water habitats. Many factors influenced the distribution and abundance of waterfowl in shallow-water habitats. Habitat degradation resulted in the decline in numbers of most duck species and a change in distribution of some species. Increased numbers of mallards (Anas platyrhynchos) in recent decades probably resulted from release programs conducted by the Maryland Department of Natural Resources and private individuals. Studies of food habits since 1885 showed a decline in submerged-aquatic vegetation in the diet of some species, such as the canvasback (Aythya valisineria ), and an increase in the proportions of invertebrates in the diet. Diversity of food organisms for many waterfowl species has declined. Surveys of vegetation and invertebrates in the Chesapeake Bay generally reflect a degradation of shallow-water habitat. Human population increases in the Chesapeake Bay watershed directly and indirectly affected waterfowl distribution and abundance. The increase of exotic plant and invertebrate species in the bay, in most cases, benefited waterfowl populations. Increased contaminants have reduced the quality and quantity of habitat, although serious attempts to reverse this trend are underway. The use of shallow-water habitats by humans for fishing, hunting, boating, and other recreational and commercial uses reduced the use of shallow-water habitats by waterfowl. Humans can lessen the adverse influences on the valuable shallow-water habitats by restricting human population growth near these habitats and improving the water quality of the bay tributaries. Other affirmative actions that will improve these areas for waterfowl include greater

  19. Insulin-Like Growth Factor-1 Preserves Salivary Gland Function After Fractionated Radiation

    SciTech Connect

    Limesand, Kirsten H.; Avila, Jennifer L.; Victory, Kerton; Chang, Hui-Hua; Shin, Yoon Joo; Grundmann, Oliver; Klein, Rob R.

    2010-10-01

    Purpose: Radiotherapy for head-and-neck cancer consists of fractionated radiation treatments that cause significant damage to salivary glands leading to chronic salivary gland dysfunction with only limited prevention and treatment options currently available. This study examines the feasibility of IGF-1 in preserving salivary gland function following a fractionated radiation treatment regimen in a pre-clinical model. Methods and Materials: Mice were exposed to fractionated radiation, and salivary gland function and histological analyses of structure, apoptosis, and proliferation were evaluated. Results: In this study, we report that treatment with fractionated doses of radiation results in a significant level of apoptotic cells in FVB mice after each fraction, which is significantly decreased in transgenic mice expressing a constitutively active mutant of Akt1 (myr-Akt1). Salivary gland function is significantly reduced in FVB mice exposed to fractionated radiation; however, myr-Akt1 transgenic mice maintain salivary function under the same treatment conditions. Injection into FVB mice of recombinant insulin-like growth factor-1 (IGF-1), which activates endogenous Akt, suppressed acute apoptosis and preserved salivary gland function after fractionated doses of radiation 30 to 90 days after treatment. FVB mice exposed to fractionated radiation had significantly lower levels of proliferating cell nuclear antigen-positive salivary acinar cells 90 days after treatment, which correlated with a chronic loss of function. In contrast, FVB mice injected with IGF-1 before each radiation treatment exhibited acinar cell proliferation rates similar to those of untreated controls. Conclusion: These studies suggest that activation of IGF-1-mediated pathways before head-and-neck radiation could modulate radiation-induced salivary gland dysfunction and maintain glandular homeostasis.

  20. Novel bayes factors that capture expert uncertainty in prior density specification in genetic association studies.

    PubMed

    Spencer, Amy V; Cox, Angela; Lin, Wei-Yu; Easton, Douglas F; Michailidou, Kyriaki; Walters, Kevin

    2015-05-01

    Bayes factors (BFs) are becoming increasingly important tools in genetic association studies, partly because they provide a natural framework for including prior information. The Wakefield BF (WBF) approximation is easy to calculate and assumes a normal prior on the log odds ratio (logOR) with a mean of zero. However, the prior variance (W) must be specified. Because of the potentially high sensitivity of the WBF to the choice of W, we propose several new BF approximations with logOR ∼N(0,W), but allow W to take a probability distribution rather than a fixed value. We provide several prior distributions for W which lead to BFs that can be calculated easily in freely available software packages. These priors allow a wide range of densities for W and provide considerable flexibility. We examine some properties of the priors and BFs and show how to determine the most appropriate prior based on elicited quantiles of the prior odds ratio (OR). We show by simulation that our novel BFs have superior true-positive rates at low false-positive rates compared to those from both P-value and WBF analyses across a range of sample sizes and ORs. We give an example of utilizing our BFs to fine-map the CASP8 region using genotype data on approximately 46,000 breast cancer case and 43,000 healthy control samples from the Collaborative Oncological Gene-environment Study (COGS) Consortium, and compare the single-nucleotide polymorphism ranks to those obtained using WBFs and P-values from univariate logistic regression.

  1. Spatial patterns of distribution and the influence of seasonal and abiotic factors on demersal ichthyofauna in an estuarine tropical bay.

    PubMed

    da Silva, D R; Paranhos, R; Vianna, M

    2016-07-01

    This study focused on the influence of local-scale environmental factors on key metrics of fish community structure and function at Guanabara Bay, an estuarine system that differs from all other south-western Atlantic estuaries due to the influence of an annual low-intensity upwelling event during late spring and summer, between November and March, when a warm rainy climate prevails. The spatial patterns of the bottom temperature and salinity were more heterogeneous during the rainy season than the dry season, being linked to total precipitation and seasonal oceanographic events. The study identified 130 species and 45 families, placing Guanabara Bay as one of the most species-rich tropical estuarine ecosystems, far exceeding 22 other Brazilian estuaries. These results, in addition to characteristics such as a relatively well-preserved mangrove forest, high productivity and favourable conditions for the growth and reproduction of estuarine species, indicate that Guanabara Bay plays a central role in supporting large populations of fishes, including commercially important species. PMID:27401484

  2. Variations of summer phytoplankton community related to environmental factors in a macro-tidal estuarine embayment, Hangzhou Bay, China

    NASA Astrophysics Data System (ADS)

    Zhang, Yuexia; Yu, Jun; Jiang, Zhibing; Wang, Qin; Wang, Hui

    2015-12-01

    To explore the distribution and composition of phytoplankton community and their responses to environmental changes, summer net-collected phytoplankton and physicochemical parameters in the Hangzhou Bay during 2004-2010 were investigated. A total of four phyla and 84 species were identified, including 67 diatom and 12 dinoflagellate species. The dominant species constantly consisted of the diatoms, although the dominance of dinoflagellate and cyanobacteria increased recently. Due to great spatio-temporal variations in environmental factors (salinity, suspended solids, and nutrient concentration), significant heterogeneities in community compositions among different years and subregions (inner and middle sections, and bay mouth) were found based on the analyses of multidimensional scaling and similarity. Canonical correspondence analysis showed that salinity and Si/N were the main variables associated with algal assemblage. Compared with the historical data since the 1980s, eutrophication (N, P, and N/P increased with decreasing Si/N) was exacerbated drastically. Moreover, climatic forcing and human activities resulted in a series of physical alterations, including sediment retention, temperature increase, and salinity decrease as well as reduction in water exchanges. All these changes induced obvious increases in cell density and Chl- a while decreases in species diversity and diatom-dinoflagellate ratio as well as the shifting of dominant species. Therefore, the long-term phytoplankton variations were closely related to anthropogenic and climatic perturbations in the Hangzhou Bay.

  3. [Fish community structure and its relationships with environmental factors in Haizhou Bay and adjacent waters of East China in winter].

    PubMed

    Wang, Xiao-Lin; Xu, Bin-Duo; Ji, Yu-Peng; Ren, Yi-Ping

    2013-06-01

    Based on the bottom trawl survey and environmental investigation data in December 2011, and by using species diversity indices and multi-element analysis, this paper studied the species composition, species diversity, and spatial pattern of fish community as well as their relationships with environmental factors in Haizhou Bay and adjacent waters. A total of 60 fish species were captured, belonging to 51 genera, 34 families, and 10 orders, and mainly composed of warm temperature and warm water demersal fishes. The Margalef species richness index, Shannon diversity index, and Pielou evenness index ranged from 1.14 to 2.84, 1.08 to 2.64, and 0.41 to 0.83, respectively. Cluster analysis and non-metric multidimensional scaling (MDS) analysis showed that the fish community could be spatially clustered into three groups. Group I was in the north of 35 N, group II was in the inshore waters near bay-head, and group III was in the south of 35 degrees N. ANOSIM analysis showed that there existed highly significant differences (R = 0.45-0.91) in the fish species composition among the groups. The canonical correspondence analysis (CCA) indicated that the bottom water temperature, water depth, and sea surface salinity were the most important environmental variables affecting the spatial pattern of fish community in Haizhou Bay and adjacent waters in winter.

  4. Case-Control Genome-wide Joint Association Study Using Semiparametric Empirical Model and Approximate Bayes Factor

    PubMed Central

    Xu, Jinfeng; Zheng, Gang; Yuan, Ao

    2012-01-01

    We propose a semiparametric approach for the analysis of case-control genome-wide association study. Parametric components are used to model both the conditional distribution of the case status given the covariates and the distribution of genotype counts, whereas the distribution of the covariates are modeled nonparametrically. This yields a direct and joint modeling of the case status, covariates and genotype counts, and gives better understanding of the disease mechanism and results in more reliable conclusions. Side information, such as the disease prevalence, can be conveniently incorporated into the model by empirical likelihood approach and leads to more efficient estimates and powerful test in the detection of disease-associated SNPs. Profiling is used to eliminate a nuisance nonparametric component, and the resulting profile empirical likelihood estimates are shown to be consistent and asymptotically normal. For the hypothesis test on disease association, we apply the approximate Bayes factor (ABF) which is computationally simple and most desirable in genome-wide association studies where hundreds of thousands to a million genetic markers are tested. We treat the approximate Bayes factor as a hybrid Bayes factor which replaces the full data by the maximum likelihood estimates of the parameters of interest in the full model and derive it under a general setting. The deviation from Hardy-Weinberg Equilibrium (HWE) is also taken into account and the ABF for HWE using cases is shown to provide evidence of association between a disease and a genetic marker. Simulation studies and an application are further provided to illustrate the utility of the proposed methodology. PMID:24532860

  5. Chesapeake Bay study

    NASA Technical Reports Server (NTRS)

    Love, W. J.

    1972-01-01

    The objectives and scope of the Chesapeake Bay study are discussed. The physical, chemical, biological, political, and social phenomena of concern to the Chesapeake Bay area are included in the study. The construction of a model of the bay which will provide a means of accurately studying the interaction of the ecological factors is described. The application of the study by management organizations for development, enhancement, conservation, preservation, and restoration of the resources is examined.

  6. The influence of void fraction on the submerged perforated sheet hydraulic friction factor

    NASA Astrophysics Data System (ADS)

    Blinkov, V. N.; Elkin, I. V.; Emelianov, D. A.; Melikhov, V. I.; Melikhov, O. I.; Nerovnov, A. A.; Nikonov, S. M.; Parfenov, Yu. V.

    2015-07-01

    The results from an experimental investigation of two-phase flow motion through a submerged perforated sheet (SPS) obtained at the Elektrogorsk Research Center test facility are presented. The test facility, the test section of which is a transverse "cutout" from the full-scale PGV-1000 steam generator with the models of vessel internals, is described in detail. The procedure for carrying out trial startups is outlined, and the system of instrument and control devices is described. The SPS used in all experimental modes of operation had the perforation ratio (the hole area to the sheet area ratio) equal to 5.7%. The pressure in the system was around 7 MPa, and the flow rate of supplied steam was varied from 4.23 to 7.94 t/h, which corresponded to the steam velocity at the evaporation surface equal to 0.15-0.29 m/s. Distributions of pressure difference across the SPS and void fractions under the SPS and above it are obtained. The SPS hydraulic friction factor for a two-phase flow is determined as a result of processing the experimental data. A correction for two-phase nature of the flow for the SPS operating conditions is determined by comparing the obtained SPS hydraulic friction factor for a two-phase flow with the SPS hydraulic friction factor to single-phase flow of steam. It is shown that this correction can be either greater than unity (at low void fractions) or less than unity (at high void fractions).

  7. Population attributable fraction of modifiable risk factors for Alzheimer disease: A systematic review of systematic reviews

    PubMed Central

    Hazar, Narjes; Seddigh, Leila; Rampisheh, Zahra; Nojomi, Marzieh

    2016-01-01

    Background: Alzheimer’s disease (AD) is the most common type of dementia. Demonstrating the modifiable risk factors of AD can help to plan for prevention of this disease. The aim of the current review was to characterize modifiable cardiovascular risk factors of AD using existing data and determine their contribution in AD development in Iran and the world. Methods: The systematic search was done in Medline, Scopus, and Cochrane databases from inception to May 2014 to find systematic reviews or meta-analyses about association between AD and cardiovascular modifiable risk factors included diabetes, hypertension (HTN), physical inactivity, smoking, hypercholesterolemia, and overweight and obesity. The population attributable fraction (PAF) was calculated for these risk factors in Iran and the world. Results: Of 2651 articles, 11 were eligible for data extraction after assessing relevancy and quality. Diabetes mellitus (DM) type 2, smoking, physical inactivity, overweight and obesity were significantly associated with increased risk of AD. Physical inactivity with 22.0% and smoking with 15.7% had the highest PAF for AD in Iran and the world, respectively. Conclusion: Our findings demonstrated that modifiable cardiovascular risk factors could increase the risk of AD. Moreover, about one-third of AD cases were attributed to five modifiable risk factors. PMID:27648178

  8. Population attributable fraction of modifiable risk factors for Alzheimer disease: A systematic review of systematic reviews

    PubMed Central

    Hazar, Narjes; Seddigh, Leila; Rampisheh, Zahra; Nojomi, Marzieh

    2016-01-01

    Background: Alzheimer’s disease (AD) is the most common type of dementia. Demonstrating the modifiable risk factors of AD can help to plan for prevention of this disease. The aim of the current review was to characterize modifiable cardiovascular risk factors of AD using existing data and determine their contribution in AD development in Iran and the world. Methods: The systematic search was done in Medline, Scopus, and Cochrane databases from inception to May 2014 to find systematic reviews or meta-analyses about association between AD and cardiovascular modifiable risk factors included diabetes, hypertension (HTN), physical inactivity, smoking, hypercholesterolemia, and overweight and obesity. The population attributable fraction (PAF) was calculated for these risk factors in Iran and the world. Results: Of 2651 articles, 11 were eligible for data extraction after assessing relevancy and quality. Diabetes mellitus (DM) type 2, smoking, physical inactivity, overweight and obesity were significantly associated with increased risk of AD. Physical inactivity with 22.0% and smoking with 15.7% had the highest PAF for AD in Iran and the world, respectively. Conclusion: Our findings demonstrated that modifiable cardiovascular risk factors could increase the risk of AD. Moreover, about one-third of AD cases were attributed to five modifiable risk factors.

  9. Theoretical calculation of nitrogen isotope equilibrium exchange fractionation factors for various NOy molecules

    NASA Astrophysics Data System (ADS)

    Walters, Wendell W.; Michalski, Greg

    2015-09-01

    The nitrogen stable isotope ratio (15N/14N) of nitrogen oxides (NOx = NO + NO2) and its oxidation products (NOy = NOx + PAN (peroxyacetyl nitrate = C2H3NO5) + HNO3 + NO3 + HONO + N2O5 + ⋯ + particulate nitrates) has been suggested as a tool for partitioning NOx sources; however, the impact of nitrogen (N) equilibrium isotopic fractionation on 15N/14N ratios during the conversion of NOx to NOy must also be considered, but few fractionation factors for these processes have been determined. To address this limitation, computational quantum chemistry calculations of harmonic frequencies, reduced partition function ratios (15β), and N equilibrium isotope exchange fractionation factors (αA/B) were performed for various gaseous and aqueous NOy molecules in the rigid rotor and harmonic oscillator approximations using the B3LYP and EDF2 density functional methods for the mono-substitution of 15N. The calculated harmonic frequencies, 15β, and αA/B are in good agreement with available experimental measurements, suggesting the potential to use computational methods to calculate αA/B values for N isotope exchange processes that are difficult to measure experimentally. Additionally, the effects of solvation (water) on 15β and αA/B were evaluated using the IEF-PCM model, and resulted in lower 15β and αA/B values likely due to the stabilization of the NOy molecules from dispersion interactions with water. Overall, our calculated 15β and αA/B values are accurate in the rigid rotor and harmonic oscillator approximations and will allow for the estimation of αA/B involving various NOy molecules. These calculated αA/B values may help to explain the trends observed in the N stable isotope ratio of NOy molecules in the atmosphere.

  10. [Community structure of phytoplankton and its relationships with environmental factors in drinking water source of Jinshu Bay, Taihu Lake].

    PubMed

    Li, Qin-qin; Deng, Jian-cai; Hu, Wei-ping; Hu, Liu-ming; Gao, Feng; Zhu, Jin-ge

    2010-07-01

    By using canonical correspondence analysis (CCA), this paper studied the community structure of phytoplankton and its relationships with environmental factors in the drinking water source of Jinshu Bay, Taihu Lake. A total of 7 phylum and 58 genera were identified, and the phytoplankton community was dominated by Cyanophyta, Bacillariophyta, and Chlorophyta. The quantity of phytoplankton was slightly higher in summer (250 x 10(4) ind x L(-1)) than in spring (238 x 10(4) ind x L(-1)), but the community structure differed obviously between the two seasons. In spring, Cyanophyta was the dominant phylum, and Anabaena was the dominant genus; in summer, Chlorophyta was the dominant phylum, with no dominant genus but abundant quantity of Merismopedia and Scenedesmus. Besides temperature, the main environmental factors affecting the distribution of phytoplankton in spring were ammonium-nitrogen, total phosphorus, total nitrogen, and phosphate, while those in summer were total nitrogen, ammonium-nitrogen, phosphate, suspended solids, macrophytes, total phosphorus, and transparency.

  11. BAY 81-8973, a full-length recombinant factor VIII: Human heat shock protein 70 improves the manufacturing process without affecting clinical safety.

    PubMed

    Maas Enriquez, Monika; Thrift, John; Garger, Stephen; Katterle, Yvonne

    2016-11-01

    BAY 81-8973 is a full-length, unmodified recombinant human factor VIII (FVIII) approved for the treatment of hemophilia A. BAY 81-8973 has the same amino acid sequence as the currently marketed sucrose-formulated recombinant FVIII (rFVIII-FS) product and is produced using additional advanced manufacturing technologies. One of the key manufacturing advances for BAY 81-8973 is introduction of the gene for human heat shock protein 70 (HSP70) into the rFVIII-FS cell line. HSP70 facilitates proper folding of proteins, enhances cell survival by inhibiting apoptosis, and potentially impacts rFVIII glycosylation. HSP70 expression in the BAY 81-8973 cell line along with other manufacturing advances resulted in a higher-producing cell line and improvements in the pharmacokinetics of the final product as determined in clinical studies. HSP70 protein is not detected in the harvest or in the final BAY 81-8973 product. However, because this is a new process, clinical trial safety assessments included monitoring for anti-HSP70 antibodies. Most patients, across all age groups, had low levels of anti-HSP70 antibodies before exposure to the investigational product. During BAY 81-8973 treatment, 5% of patients had sporadic increases in anti-HSP70 antibody levels above a predefined threshold (cutoff value, 239 ng/mL). No clinical symptoms related to anti-HSP70 antibody development occurred. In conclusion, addition of HSP70 to the BAY 81-8973 cell line is an innovative technology for manufacturing rFVIII aimed at improving protein folding and expression. Improved pharmacokinetics and no effect on safety of BAY 81-8973 were observed in clinical trials in patients with hemophilia A.

  12. BAY 81-8973, a full-length recombinant factor VIII: Human heat shock protein 70 improves the manufacturing process without affecting clinical safety.

    PubMed

    Maas Enriquez, Monika; Thrift, John; Garger, Stephen; Katterle, Yvonne

    2016-11-01

    BAY 81-8973 is a full-length, unmodified recombinant human factor VIII (FVIII) approved for the treatment of hemophilia A. BAY 81-8973 has the same amino acid sequence as the currently marketed sucrose-formulated recombinant FVIII (rFVIII-FS) product and is produced using additional advanced manufacturing technologies. One of the key manufacturing advances for BAY 81-8973 is introduction of the gene for human heat shock protein 70 (HSP70) into the rFVIII-FS cell line. HSP70 facilitates proper folding of proteins, enhances cell survival by inhibiting apoptosis, and potentially impacts rFVIII glycosylation. HSP70 expression in the BAY 81-8973 cell line along with other manufacturing advances resulted in a higher-producing cell line and improvements in the pharmacokinetics of the final product as determined in clinical studies. HSP70 protein is not detected in the harvest or in the final BAY 81-8973 product. However, because this is a new process, clinical trial safety assessments included monitoring for anti-HSP70 antibodies. Most patients, across all age groups, had low levels of anti-HSP70 antibodies before exposure to the investigational product. During BAY 81-8973 treatment, 5% of patients had sporadic increases in anti-HSP70 antibody levels above a predefined threshold (cutoff value, 239 ng/mL). No clinical symptoms related to anti-HSP70 antibody development occurred. In conclusion, addition of HSP70 to the BAY 81-8973 cell line is an innovative technology for manufacturing rFVIII aimed at improving protein folding and expression. Improved pharmacokinetics and no effect on safety of BAY 81-8973 were observed in clinical trials in patients with hemophilia A. PMID:27436242

  13. Experimental determination of the Mo isotope fractionation factor between metal and silicate liquids

    NASA Astrophysics Data System (ADS)

    Hin, R. C.; Burkhardt, C.; Schmidt, M. W.; Bourdon, B.

    2011-12-01

    before chemical purification. Initial results provide an equilibrium 98Mo/95Mo isotope fractionation factor between metal and silicate liquids of -0.18±0.10% (2σ) at 1400°C and 1 GPa. Although the relative mass difference of these Mo isotopes is smaller than for Fe isotopes, this result implies that metal-silicate segregation may have led to mass-dependent stable Mo isotope fractionation, as opposed to Fe isotopes. A possible explanation is that the bonding environment of Mo may counterbalance its relatively small mass separation. At reducing conditions, Mo occurs in 4+ valence state in silicates [4] and thus its bond strength difference between metal and silicate may be more similar to that of Si than Fe. Stable Mo isotopes may thus become an important tool for constraining the conditions of core formation in asteroids and terrestrial planets. [1] Rubie et al. (2011) EPSL 301, 31-42. [2] Shahar et al. (2009) EPSL 288, 228-234. [3] Poitrasson et al. (2009) EPSL 278, 376-385. [4] Farges et al. (2006) Can. Min. 44, 731-753.

  14. A review of factors influencing measurements of decadal variations in metal contamination in San Francisco Bay, California.

    PubMed

    Flegal, A Russell; Conaway, Christopher H; Scelfo, Genine M; Hibdon, Sharon A; Sañudo-Wilhelmy, Sergio A

    2005-08-01

    This review summarizes some of the principal results of systematic measurements of trace metal concentrations throughout San Francisco Bay that began in 1989, and that have yielded insights on the factors controlling temporal and spatial variations of those concentrations on seasonal to decadal time scales. Pronounced seasonal variation in some metal concentrations is associated with gradients in the system's hydrology and the diagenetic remobilization of metals from benthic sediments. Additional temporal variation is associated with interannual differences in hydrologic flushing (e.g., ENSO cycles) and episodic storm events. While intra- and inter-annual variabilities complicate assessments of long-term variations in metal concentrations, recent analyses using stable lead isotopic composition distributions and time-series models have deconvoluted decadal changes in lead and silver concentrations in the estuary. Decadal variations in concentrations of other contaminant metals (e.g., mercury) are now being characterized, as well as projections of future concentrations of other metals of concern (e.g., copper). These historic assessments and projections of trace metal variations attest to the importance of long-term, systematic monitoring programs to quantify past and future impacts on water quality in San Francisco Bay and other complex estuarine systems. PMID:16215699

  15. Seasonal change in body length of important small copepods and relationship with environmental factors in Jiaozhou Bay, China

    NASA Astrophysics Data System (ADS)

    Sun, Xiaohong; Sun, Song; Li, Chaolun; Wang, Minxiao

    2012-05-01

    Differences among species in prosome length and in species' response to environmental factors do exist. Therefore, it is useful to examine prosome length for different copepod species in variable environments. Seasonal variations in prosome length of four small copepods and their copepodite stages in the Jiaozhou Bay were compared and the relative influence of temperature, salinity, and chlorophyll concentration were examined. Two peaks were found in the mean prosome length of Paracalanus parvus (in early winter and May). For Acartia bifilosa, the maximum values of all copepodites occurred mainly from February to April, and decreased to the bottom in July. Prosome length of Acartia pacifica peaked when it first appeared in June, then reached to the minimum in July. Parvocalanus crassirostris only appeared from late summer to autumn and the mean prosome length showed no clear changes. Correlations of adult prosome length with environmental factors were evaluated. For the four species, temperature was negatively correlated to prosome length except for P. crassirostris. But the different species varied markedly in their responds to temperature. A. bifilosa showed a more definite trend of size variation with temperature than P. parvus and A. pacifica. Correlations of prosome length with salinity were significantly positive for almost all the small copepods. The relationship between chlorophyll concentration and prosome length was complicated for these copepods, but for P. parvus, chlorophyll concentration was also an important affecting factor. Furthermore, investigation needs to be done on food quality for some copepod. These results are essential to estimate the biomass and the production, and to understand these small copepods' population dynamics in this human-affected bay.

  16. Factors affecting measurement of channel thickness in asymmetrical flow field-flow fractionation.

    PubMed

    Dou, Haiyang; Jung, Euo Chang; Lee, Seungho

    2015-05-01

    Asymmetrical flow field-flow fractionation (AF4) has been considered to be a useful tool for simultaneous separation and characterization of polydisperse macromolecules or colloidal nanoparticles. AF4 analysis requires the knowledge of the channel thickness (w), which is usually measured by injecting a standard with known diffusion coefficient (D) or hydrodynamic diameter (dh). An accurate w determination is a challenge due to its uncertainties arising from the membrane's compressibility, which may vary with experimental condition. In the present study, influence of factors including the size and type of the standard on the measurement of w was systematically investigated. The results revealed that steric effect and the particles-membrane interaction by van der Waals or electrostatic force may result in an error in w measurement. PMID:25817708

  17. Factors affecting measurement of channel thickness in asymmetrical flow field-flow fractionation.

    PubMed

    Dou, Haiyang; Jung, Euo Chang; Lee, Seungho

    2015-05-01

    Asymmetrical flow field-flow fractionation (AF4) has been considered to be a useful tool for simultaneous separation and characterization of polydisperse macromolecules or colloidal nanoparticles. AF4 analysis requires the knowledge of the channel thickness (w), which is usually measured by injecting a standard with known diffusion coefficient (D) or hydrodynamic diameter (dh). An accurate w determination is a challenge due to its uncertainties arising from the membrane's compressibility, which may vary with experimental condition. In the present study, influence of factors including the size and type of the standard on the measurement of w was systematically investigated. The results revealed that steric effect and the particles-membrane interaction by van der Waals or electrostatic force may result in an error in w measurement.

  18. [Monthly changes and related affecting factors in community structure and diversity of the crab assemblages in central Jiaozhou Bay, China].

    PubMed

    Pang, Zhi-Wei; Xu, Bin-Duo; Ji, Yu-Peng; Ren, Yi-Ping

    2014-02-01

    Based on the monthly bottom trawl surveys in the central area of Jiaozhou Bay from September 2008 to August 2009, monthly changes and related affecting factors in community structure and diversity of the crab assemblages were examined using index of relative importance, ecological diversity indices, multivariate statistical analysis. In total, 18 crab species were caught and they belonged to 11 families, 17 genera. The relative abundance of crab varied dramatically among months, which was high in June, July and August. The dominant species composition of crab assemblage was observed to vary over months dramatically. The dominant species for the whole year was Charybdis bimaculata, and the dominant species in different specific months were C. bimaculata, C. japonica, Portunus trituberculatus, Raphidopus ciliatus and Eucrate crenata. The ranges across months of the Margalef' s species richness index (D), Shannon diversity index (H) and Pielou's evenness index (J) of the crab community structure were 0.54-2.86, 0.06-2.59 and 0.03-0.97, respectively. The diversity indices in winter months were the highest, and the diversity indices in autumn months were higher than in the spring and autumn months. MDS and CLUSTER analyses revealed that three groups/clusters, which were Group I (from May to October), Group, II (April, November and December) and Group III (January, February and March), were identi- fied for crab community during all the year in the central area of Jiaozhou Bay. ANOSIM analysis in community structure indicated that there were extremely significant differences among the groups, significant differences between Group I and Group II or between Group I and Group III, and no significant differences between Group II and Group III. Typifying species in the within-group included C. bimaculata, P. trituberculatus, C. japonica, E. crenata and R. ciliatus, and discriminating species between groups included C. bimaculata, C. japonica and P. trituberculatus. These

  19. Plankton productivity and biomass in a tributary of the upper Chesapeake Bay. I. Importance of size-fractionated phytoplankton productivity, biomass and species composition in carbon export

    NASA Astrophysics Data System (ADS)

    Sellner, Kevin G.

    1983-08-01

    Phytoplankton productivity, community composition and biomass were determined over a nine-month period in brackish waters of the lower Gunpowder River, a tributary of Chesapeake Bay. Primary productivity followed expected seasonal magnitudes for temperate estuaries with rates exceeding 142·4 mg C m -3 h -1 in July through September 1979 and minimum rates of 1·6 mg C m -3 h -1 in February 1980. Annual primary production was estimated at 45·5 gC m -2. Cell numbers were highest in August, September and November with cyanophytes dominating the planktonic algae. Primary productivity, chlorophyll concentrations and cell densities were dominated by nanoplanktonic forms (< 10 μm) through-out the study. Phytoplankton carbon calculated from cells volumes exceeded nutritional requirements of the pelagic herbivores in all months suggesting a mean daily export (to the bay or sediments) of 1607 mg C m -3 d -1.

  20. Neurite-promoting factor in conditioned medium from RN22 Schwannoma cultures: bioassay, fractionation, and properties.

    PubMed

    Manthorpe, M; Varon, S; Adler, R

    1981-09-01

    On polyornithine (PORN) substrata dissociated 8-day chick embryo ciliary ganglionic neurons will survive if the culture medium is supplemented with Ciliary neuronotrophic Factor. However, neuritic growth will not occur unless the substratum is derivatized with a PORN-bindable Neurite Promoting Factor (PNPF). In this preliminary study we report that soluble PNPF can be (1) assayed by a convenient in vitro system; (2) obtained in relatively large amounts from serum-free media conditioned over RN22 Schwannoma cultures; (3) concentrated by using Amicon XM100 ultrafiltration; and (4) separated from nearly all of the non-active protein by using ion-exchange chromatography. The partially purified PNPF can be concentrated using XM100 and is heat- and protease-sensitive. In the course of these fractionation studies we observed in some cases a concentration-dependent interference with the expression of PNPF activity in the bioassay; we propose graphical methods to permit the simultaneous determination of PNPF and the extent of such interference. Different treatments that affected the interference property did not always affect PNPF activity in a reciprocal manner, leaving open the possibility that the interference with PNPF activity results from reversible alteration of the PNPF molecule, or that there exists a separate interfering agent.

  1. Neurite-promoting factor in conditioned medium from RN22 Schwannoma cultures: bioassay, fractionation, and properties.

    PubMed

    Manthorpe, M; Varon, S; Adler, R

    1981-09-01

    On polyornithine (PORN) substrata dissociated 8-day chick embryo ciliary ganglionic neurons will survive if the culture medium is supplemented with Ciliary neuronotrophic Factor. However, neuritic growth will not occur unless the substratum is derivatized with a PORN-bindable Neurite Promoting Factor (PNPF). In this preliminary study we report that soluble PNPF can be (1) assayed by a convenient in vitro system; (2) obtained in relatively large amounts from serum-free media conditioned over RN22 Schwannoma cultures; (3) concentrated by using Amicon XM100 ultrafiltration; and (4) separated from nearly all of the non-active protein by using ion-exchange chromatography. The partially purified PNPF can be concentrated using XM100 and is heat- and protease-sensitive. In the course of these fractionation studies we observed in some cases a concentration-dependent interference with the expression of PNPF activity in the bioassay; we propose graphical methods to permit the simultaneous determination of PNPF and the extent of such interference. Different treatments that affected the interference property did not always affect PNPF activity in a reciprocal manner, leaving open the possibility that the interference with PNPF activity results from reversible alteration of the PNPF molecule, or that there exists a separate interfering agent. PMID:7276956

  2. Benthic macroinvertebrate associations in relation to environmental factors in Georgian Bay

    SciTech Connect

    Johnson, M.G.; McNeil, O.C.; George, S.E.

    1987-01-01

    Association analysis of data on benthic macroinvertebrates in 257 samples from Georgian Bay, followed by discriminant analysis of water and sediment characteristics, facilitated a quantitative description of trophic variability within a relatively unpolluted system. Discriminating variables were bottom water temperature, water pH and Ca, sediment organic matter, sand, silt, clay, total P, Zn, Pb, and Hg. Four discriminating functions, accounting for 86% of variance, indicated the importance of temperature, concentrations of organic matter and silt, water pH and Ca. Associations which occurred at cooler temperatures consisted of Pontoporeia hoyi with dominant oligochaetes and chironomids generally determined by sediment richness. These associations were P. hoyi - Limnodrilus hoffmeisteri - Chironomus spp, and Procladius spp. at highest sediment richness, P. hoyi - Spirosperma ferox - Micropsectra spp, at intermediate richness and P. hoyi - Stylodrilus heringianus - Heterotrissocladius sp. at lowest richness. Associations in warmer waters consisted of a Chironomus spp. - Chaoborus spp. association in richer sediments and an association of Caecidotea racovitzae and Amnicola spp. at lower sediment richness. A Hexagenia limbata - Hyalella azteca association occurred over a broad range in concentrations of organic matter and silt, but, in terms of sediment texture represented by sand content, this association was intermediate between the other two groups in warmer waters. Finally, a Zalutschia zalutschia zalutschicola - Chaoborus spp. association was related to water pH and Ca in discriminant analysis. 33 references, 4 figures, 4 tables.

  3. A Tutorial on Computing Bayes Factors for Single-Subject Designs.

    PubMed

    de Vries, Rivka M; Hartogs, Bregje M A; Morey, Richard D

    2015-11-01

    When researchers are interested in the effect of certain interventions on certain individuals, single-subject studies are often performed. In their most simple form, such single-subject studies require that a subject is measured on relevant criterion variables several times before an intervention and several times during or after the intervention. Scores from the two phases are then compared in order to investigate the intervention effect. Since observed scores typically consist of a mixture of true scores and random measurement error, simply looking at the difference in scores can be misleading. Hence, de Vries & Morey (2013) developed models and hypothesis tests for single-subject data, quantifying the evidence in data for the size and presence of an intervention effect. In this paper we give a non-technical overview of the models and hypothesis tests and show how they can be applied on real data using the BayesSingleSub R package, with the aid of an empirical data set.

  4. Examination of silicate limitation of primary production in Jiaozhou Bay, China. I. Silicate being a limiting factor of phytoplankton primary production

    NASA Astrophysics Data System (ADS)

    Yang, Dong-Fang; Zhang, Jing; Lu, Ji-Bin; Gao, Zhen-Hui; Chen, Yu

    2002-09-01

    Jiaozhou Bay data collected from May 1991 to February 1994, in 12 seasonal investigations, and provided the authors by the Ecological Station of Jiaozhou Bay, were analyzed to determine the spatiotemporal variations in temperature, light, nutrients (NO{3/-}-N, NO{2/-}-N, NH{4/+}-N, SiO{3/2-}-Si, PO{4/3-}-P), phytoplankton, and primary production in Jiaozhou Bay. The results indicated that only silicate correlated well in time and space with, and had important effects on, the characteristics, dynamic cycles and trends of, primary production in Jiaozhou Bay. The authors developed a corresponding dynamic model of primary production and silicate and water temperature. Eq. (1) of the model shows that the primary production variation is controlled by the nutrient Si and affected by water temperature; that the main factor controlling the primary production is Si; that water temperature affects the composition of the structure of phytoplankton assemblage; that the different populations of the phytoplankton assemblage occupy different ecological niches for C, the apparent ratio of conversion of silicate in seawater into phytoplankton biomas and D, the coefficient of water temperature's effect on phytoplankton biomass. The authors researched the silicon source of Jiaozhou Bay, the biogeochemical sediment process of the silicon, the phytoplankton predominant species and the phytoplankton structure. The authors considered silicate a limiting factor of primary production in Jiaozhou Bay, whose decreasing concentration of silicate from terrestrial source is supposedly due to dilution by current and uptake by phytoplankton; quantified the silicate assimilated by phytoplankton, the intrinsic ratio of conversion of silicon into phytoplankton biomass, the proportion of silicate uptaken by phytoplankton and diluted by current; and found that the primary production of the phytoplankton is determined by the quantity of the silicate assimilated by them. The phenomenon of apparently high

  5. Matching-adjusted indirect comparisons of efficacy of BAY 81-8973 vs two recombinant factor VIII for the prophylactic treatment of severe hemophilia A

    PubMed Central

    Pocoski, Jennifer; Li, Nanxin; Ayyagari, Rajeev; Church, Nikki; Maas Enriquez, Monika; Xiang, Quer; Kelkar, Sneha; Du, Ella X; Wu, Eric Q; Xie, Jipan

    2016-01-01

    Background No head-to-head trials comparing recombinant factor VIII (rFVIII) products currently exist. This was a matching-adjusted indirect comparison (MAIC) study of efficacy of BAY 81-8973 with antihemophilic factor (recombinant) plasma/albumin-free method (rAHF-PFM) and turoctocog alfa for the prophylaxis of severe hemophilia A. Methods A systematic literature review was conducted to identify trials of rAHF-PFM and turoctocog alfa. Comparisons were conducted using BAY 81-8973 individual patient data (IPD) from LEOPOLD trials and published data from rAHF-PFM and turoctocog alfa trials. Differences in outcome reporting were reconciled using transformation of BAY 81-8973 IPD. Patients in pooled LEOPOLD trials were weighted to match baseline characteristics for rAHF-PFM or turoctocog alfa trials using MAICs. After matching, annualized bleed rates (ABRs) were compared using weighted t-tests. Results Two rAHF-PFM trials and one turoctocog alfa trial were identified. In these trials, rFVIIIs were dosed thrice weekly or every other day; in LEOPOLD trials, BAY 81-8973 was dosed twice- or thrice weekly. Three MAICs were conducted because the two rAHF-PFM trials calculated ABRs differently, matching for age, race, and weight (turoctocog alfa only). BAY 81-8973 had similar ABR of all bleeds vs rAHF-PFM (two trials: 4.8 vs 6.3, 1.9 vs 1.8 [square root transform]) and lower ABR of spontaneous bleeds and trauma bleeds (2.6 vs 4.1, 2.1 vs 4.7; both P<0.05). BAY 81-8973 showed lower ABR of all bleeds and spontaneous bleeds vs turoctocog alfa (4.3 vs 6.5, 2.8 vs 4.3; both P<0.05) and similar ABR of trauma bleeds (1.5 vs 1.6). In subgroup analysis, twice-weekly BAY 81-8973 had similar ABRs of all bleeds, spontaneous bleeds, and trauma bleeds compared to rAHF-PFM and turoctocog alfa. Conclusion This indirect comparison found that prophylaxis with BAY 81-8973, even including the lower frequency of two times a week and lower factor VIII consumption, has efficacy comparable to r

  6. Relationship between environmental factors and plankton in the Bayuquan Port, Liaodong Bay, China: a five-year study

    NASA Astrophysics Data System (ADS)

    Song, Lun; Yang, Guojun; Wang, Nianbin; Lu, Xiaoqian

    2016-07-01

    To understand the relationship between the plankton community and environmental factors and water quality in the Bayuquan Port of Liaodong Bay, China, and investigations were carried out during six different periods (April 2009, April 2010, October 2011, April 2012, October 2012, and April 2013). This area was characterized by high levels of nutrient and suspended solids (SPS) during survey periods, and eutrophication led to the occurrence of red tides in April and October 2012 and April 2013. Our analyses revealed that the plankton communities of Bayuquan Port lacked stability and were affected seriously by external disturbance (e.g., oceanographic engineering and river runoff). Our data indicate that oil, dissolved inorganic nitrogen (DIN), SPS, and chlorophyll a (Chl- a) were key factors that regulated the phytoplankton and zooplankton communities. The partial redundancy analysis (partial RDA) suggested that oil and SPS were the most important environmental variables affecting the phytoplankton community in April 2010 and 2012, whereas DIN concentration played a governing role in zooplankton dynamics. Oil and Chl- a concentrations affected significantly the zooplankton community in October 2012. Therefore, the plankton communities could reflect both dynamic changes in coastal environmental factors and the ongoing eutrophication process caused by anthropogenic activities in this area.

  7. James Bay

    Atmospheric Science Data Center

    2013-04-17

    article title:  Hudson Bay and James Bay, Canada     View Larger ... Imaging Spectro-Radiometer (MISR) instrument on NASA's Terra satellite. The false-color image at right is a composite of red band data ...

  8. Bacillus pumilus of Palk Bay origin inhibits quorum-sensing-mediated virulence factors in Gram-negative bacteria.

    PubMed

    Nithya, Chari; Aravindraja, Chairman; Pandian, Shunmugiah Karutha

    2010-05-01

    The aim of the current study was to inhibit quoring-sensing(QS)-mediated virulence factors of representative Gram-negative bacteria by marine bacterial isolates. Bacteria isolated from Palk Bay sediments were screened for anti-QS activity. Eleven strains inhibited QS signals in Chromobacterium violaceum (ATCC 12472) and C. violaceum CV026. The marine bacterial strain S8-07 reduced the accumulation of N-acyl homoserine lactone (AHLs) and showed significant inhibition of LasA protease(76%), LasB elastase(84%), caseinase(70%), pyocyanin (84%), pyoverdin and biofilm formation(87%) in Pseudomonas aeruginosa PAO1. Strain S8-07 also showed highly significant reduction (90%) in prodigiosin, secreted casienase (92%), hemolytic activity (73%) and biofilm formation (61%) in Serratia marcescens. Strain S8-07, identified as Bacillus pumilus (accession number FJ584416), showed distinct profiles of inhibition against the virulence factors of both P. aeruginosa PAO1 (las, rhl) and S. marcescens (shl). Polar extraction and proteinase K treatment of the culture supernatant confirmed that the anti-QS activity of S8-07 was indeed due to a protein molecule. Acidification assay and HPLC analysis revealed that the degradation of AHL was not due to lactonase activity, but rather, was due to acylase activity of S8-07. Thus, novel anti-QS acylase activity is reported for the first time from a B. pumilus strain of marine origin.

  9. STIMULATION OF DEFENSE FACTORS FOR OYSTERS DEPLOYED TO CONTAMINATED SITES IN PENSACOLA BAY, FLORIDA

    EPA Science Inventory

    A positive association between chemical contaminants and defense factors has been established for eastern oysters (Crassostrea virginica) from Florida, but it is unknown whether such factors can be stimulated through short-term exposure to contaminants in the field. Hatchery oyst...

  10. Optimization of the Safety Factor Profile for High Noninductive Current Fraction Discharges in DIII-D

    SciTech Connect

    Ferron, J.R.; Holcomb, C T; Luce, T.C.; Politzer, P. A.; Turco, F.; White, A. E.; DeBoo, J. C.; Doyle, E. J.; Hyatt, A. W.; La Haye, R.; Murakami, Masanori; Petrie, T W; Petty, C C.; Rhodes, T. L.; Zeng, L.

    2011-01-01

    In order to assess the optimum q profile for discharges in DIII-D with 100% of the current driven noninductively (f(NI) = 1), the self-consistent response of the plasma profiles to changes in the q profile was studied in high f(NI), high beta(N) discharges through a scan of q(min) and q(95) at two values of beta(N). As expected, both the bootstrap current fraction, f(BS), and f(NI) increased with q(95). The temperature and density profiles were found to broaden as either q(min) or beta(N) is increased. A consequence is that f(BS) does not continue to increase at the highest values of q(min). A scaling function that depends on q(min), q(95), and the peaking factor for the thermal pressure was found to represent well the f(BS)/beta(N) inferred from the experimental profiles. The changes in the shapes of the density and temperature profiles as beta(N) is increased modify the bootstrap current density (J(BS)) profile from peaked close to the axis to relatively flat in the region between the axis and the H-mode pedestal. Therefore, significant externally driven current density in the region inside the H-mode pedestal is required in addition to J(BS) in order to match the profiles of the noninductive current density (J(NI)) to the desired total current density (J). In this experiment, the additional current density was provided mostly by neutral beam current drive with the neutral-beam-driven current fraction 40-90% of f(BS). The profiles of J(NI) and J were most similar at q(min) approximate to 1.35-1.65, q(95) approximate to 6.8, where f(BS) is also maximum, establishing this q profile as the optimal choice for f(NI) = 1 operation in DIII-D with the existing set of external current drive sources.

  11. FACTORS AFFECTING TIME-ACTIVITY BUDGETS OF BUFFLEHEAD WINTERING IN NARRAGANSETT, BAY, RI

    EPA Science Inventory

    Daily activities of wintering waterfowl can be influenced by the physical environment and by habitat factors such as prey abundance and availability. We examined variability in diurnal activity budgets of Bufflehead (Bucephala albeola) wintering at seven locations within Narragan...

  12. A nuclear factor-kappaB inhibitor BAY11-7082 inhibits interactions between human endothelial cells, T cells, and monocytes.

    PubMed

    Zhu, B; Liu, Z; Wang, P; Wu, C; Xu, H

    2008-10-01

    Costimulatory molecules play critical roles during cell-mediated immune responses. We undertook this study to determine whether CD154-CD40 interactions induced human endothelial cell (EC) activation via the nuclear factor (NF)-kappaB pathway, and whether the upregulation of monocyte-derived CD40 and CD80 is NF-kappaB pathway dependent. A CD154-expressing D1.1 cell-EC coculture with or without the NF-kappaB inhibitor BAY11-7082 was established to examine EC activation as indicated by CD62E expression. Peripheral blood mononuclear cell (PBMC)-EC cocultures were performed in the presence or absence of BAY11-7082; the expression of CD40 and CD80 on monocytes was analyzed by FACS. Allogeneic mixed lymphocyte-EC reaction (MLER) was performed to determine the inhibitory effects of BAY11-7082 to prevent lymphocyte proliferation. FACS demonstrated upregulation of EC-derived CD62E expression induced by CD154 expressing D1.1 cells. BAY11-7082 pretreated EC failed to upregulate CD62E after interaction with D1.1 cells. Monocytes upregulated CD40 and CD80 expression during PBMC-HEC interaction, and BAY11-7082 suppressed monocyte-derived CD40 and CD80 expression in a dose-dependent manner. The monocyte-derived CD86 expression was downregulated by NF-kappaB inhibitor. BAY11-7082 demonstrated inhibition of lymphocyte proliferation of allogeneic MLER. This study demonstrated that the NF-kappaB inhibitor BAY11-7082 prevented CD154-CD40 interaction-induced EC activation, suggesting that the activation of EC by T-cell-derived CD154 is via NF-kappaB pathway. The NF-kappaB inhibitor suppressed upregulation of monocytederived CD40 and CD80. Additionally, BAY11-7082 suppressed lymphocyte proliferation in response to allogeneic EC. These data indicated that NF-kappaB plays an important role in regulating costimulatory molecules in allogeneic immune responses, and strengthens the rationale for the use of NF-kappaB-directed therapy in allotransplantation.

  13. Exploring factors affecting measurements of the static coefficient of friction: An application of fractional factorial experiment design

    NASA Astrophysics Data System (ADS)

    Folkerts, Timothy J.

    2004-10-01

    The common undergraduate experiment for determining the static coefficient of friction between a wooden block and a horizontal tabletop often produces inconsistent results. We show how several factors influence the measured magnitude and consistency of the coefficient of friction. We utilize a fractional factorial experimental design, which is a method that has been specifically developed to effectively and efficiently uncover key factors that most strongly influence experimental results.

  14. The distribution characteristics of rare metal elements in surface sediments from four coastal bays on the northwestern South China Sea

    NASA Astrophysics Data System (ADS)

    Wang, Shuhong; Li, Jin; Wu, Shuzhuang; Yan, Wen; Huang, Weixia; Miao, Li; Chen, Zhong

    2016-02-01

    The distribution of rare metal elements (Zr, Sn, Ti, Y, Nb, Ta, Ce, La, Nd and Th) in surface sediments from four bays along the northwestern coast of the South China Sea allowed infer their main controlling factors and their mineralization potential as metals placer. The results revealed that their contents in surface sediments are very variable but show a clear geographic regularity. The average content of all elements in those areas decreases from the East to the West, with the minimum value of all elements in Leizhou Bay, the maximum value of Zr, Y, La, Ce, Nd and Th in Zhanjiang Bay, and the maximum values of Sn, Ti, Nb and Ta in Hailing Bay. The relative enrichment of these elements in two easternmost bays (Hailing Bay and Shuidong Bay) are attributed to the southwest alongshore current, which drain and transport terrigenous sediments from the granite region of the South China into these two bays. The correlation results between all element contents and fine sediment fraction (<63 μm) suggested that the main factors controlling the distribution of Ti, Nb and Sn should be the fine fraction of the sediment, but alternatively Zr, Y, La, Ce, Nd and Th are rich in heavy minerals and/or bioclasts, and Ta maybe affected by both. Detail analysis shows that sediments from Hailing Bay may contain abundant zircon, cassiterite, ilmenite (or rutile), xenotime, monazite, niobium tantalite and other rare metal minerals, with a good prospect as a rare metal placer resource, and the zircon, xenotime and monazite may also have good metallogenic prospects in Shuidong Bay and in the local area of Zhangjian Bay.

  15. Empirical Bayes factor analyses of quantitative trait loci for gestation length in Iberian × Meishan F2 sows.

    PubMed

    Casellas, J; Varona, L; Muñoz, G; Ramírez, O; Barragán, C; Tomás, A; Martínez-Giner, M; Ovilo, C; Sánchez, A; Noguera, J L; Rodríguez, M C

    2008-02-01

    The aim of this study was to investigate chromosomal regions affecting gestation length in sows. An experimental F2 cross between Iberian and Meishan pig breeds was used for this purpose and we genotyped 119 markers covering the 18 porcine autosomal chromosomes. Within this context, we have developed a new empirical Bayes factor (BF) approach to compare between nested models, with and without the quantitative trait loci (QTL) effect, and after including the location of the QTL as an unknown parameter in the model. This empirical BF can be easily calculated from the output of a Markov chain Monte Carlo sampling by averaging conditional densities at the null QTL effects. Linkage analyses were performed in each chromosome using an animal model to account for infinitesimal genetic effects. Initially, three QTL were detected at chromosomes 6, 8 and 11 although, after correcting for multiple testing, only the additive QTL located in cM 110 of chromosome 8 remained. For this QTL, the allelic effect of substitution of the Iberian allele increased gestation length in 0.521 days, with a highest posterior density region at 95% ranged between 0.121 and 0.972 days. Although future studies are necessary to confirm if detected QTL is relevant and segregating in commercial pig populations, a hot-spot on the genetic regulation of gestation length in pigs seems to be located in chromosome 8.

  16. Determination of water-soluble and insoluble (dilute-HCl-extractable) fractions of Cd, Pb and Cu in Antarctic aerosol by square wave anodic stripping voltammetry: distribution and summer seasonal evolution at Terra Nova Bay (Victoria Land).

    PubMed

    Annibaldi, A; Truzzi, C; Illuminati, S; Bassotti, E; Scarponi, G

    2007-02-01

    Eight PM10 aerosol samples were collected in the vicinity of the "Mario Zucchelli" Italian Antarctic Station (formerly Terra Nova Bay Station) during the 2000-2001 austral summer using a high-volume sampler and precleaned cellulose filters. The aerosol mass was determined by differential weighing of filters carried out in a clean chemistry laboratory under controlled temperature and humidity. A two-step sequential extraction procedure was used to separate the water-soluble and the insoluble (dilute-HCl-extractable) fractions. Cd, Pb and Cu were determined in the two fractions using an ultrasensitive square wave anodic stripping voltammetric (SWASV) procedure set up for and applied to aerosol samples for the first time. Total extractable metals showed maxima at midsummer for Cd and Pb and a less clear trend for Cu. In particular, particulate metal concentrations ranged as follows: Cd 0.84-9.2 microg g(-1) (average 4.7 microg g(-1)), Pb 13.2-81 microg g(-1) (average 33 microg g(-1)), Cu 126-628 microg g(-1) (average 378 microg g(-1)). In terms of atmospheric concentration, the values were: Cd 0.55-6.3 pg m(-3) (average 3.4 pg m(-3)), Pb 8.7-48 pg m(-3) (average 24 pg m(-3)), Cu 75-365 pg m(-3) (average 266 pg m(-3)). At the beginning of the season the three metals appear widely distributed in the insoluble (HCl-extractable) fraction (higher proportions for Cd and Pb, 90-100%, and lower for Cu, 70-90%) with maxima in the second half of December. The soluble fraction then increases, and at the end of the season Cd and Pb are approximately equidistributed between the two fractions, while for Cu the soluble fraction reaches its maximum level of 36%. Practically negligible contributions are estimated for crustal and sea-spray sources. Low but significant volcanic contributions are estimated for Cd and Pb (approximately 10% and approximately 5%, respectively), while there is an evident although not quantified marine biogenic source, at least for Cd. The estimated natural

  17. Antinutritional factors and functionality of protein-rich fractions of industrial guar meal as affected by heat processing.

    PubMed

    Nidhina, N; Muthukumar, S P

    2015-04-15

    Proximate composition analysis and antinutritional factor composition of different fractions of industrial guar meal: raw churi (IRC), heated churi (IHC), final churi (IFC) and guar korma (IGK) were studied and compared. Protein content was found to be very high in IGK (52.7%) when compared to the churi fractions (32-33%) and the trypsin inhibitor activities were found to be negligible in all the fractions (0.58-1.8 mg/g). Single fraction (IGK) was selected for further studies, based on the protein content. The antinutritional factors of selected fractions were significantly reduced by different heat treatments. Heat treatments significantly increased the water absorbing capacity of IGK, but reduced the nitrogen solubility, emulsifying and foaming capacity. Highest L(∗) value was observed for boiled IGK, highest a(∗) and b(∗) values for roasted IGK, during colour measurement. FTIR spectral analysis revealed the presence several aromatic groups in IGK and slight modifications in the molecular structure during heat treatments.

  18. Numerical experiments on the impacts of surface evaporation and fractionation factors on stable isotopes in precipitation

    NASA Astrophysics Data System (ADS)

    Zhang, Xinping; Guan, Huade; Zhang, Xinzhu; Zhang, Wanjun; Yao, Tianci

    2016-06-01

    The isotope enabled atmospheric water balance model is applied to examine the spatial and temporal variations of δ18O in precipitation, amount effect and meteoric water lines (MWL) under four scenarios with different fractionation nature and surface evaporation inputs. The experiments are conducted under the same weather forcing in the framework of the water balance and stable water isotope balance. Globally, the spatial patterns of mean δ18O and global MWLs simulated by four simulation tests are in reasonably good agreement with the Global Network of Isotopes in Precipitation observations. The results indicate that the assumptions of equilibrium fractionation for simulating spatial distribution in mean annual δ18O and the global MWL, and kinetic fractionation in simulating δ18O seasonality are acceptable. In Changsha, four simulation tests all reproduce the observed seasonal variations of δ18O in precipitation. Compared with equilibrium fractionation, the depleted degree of stable isotopes in precipitation is enhanced under kinetic fractionation, in company with a decrease of isotopic seasonality and inter-event variability. The alteration of stable isotopes in precipitation caused by the seasonal variation of stable isotopes in vapour evaporated from the surface is opposite between cold and warm seasons. Four simulations all produce the amount effect commonly observed in monsoon areas. Under kinetic fractionation, the slope of simulated amount effect is closer to the observed one than other scenarios. The MWL for warm and humid climate in monsoon areas are well simulated too. The slopes and intercepts of the simulated MWLs decrease under kinetic fractionation.

  19. Trophic accumulation of PSP toxins in zooplankton during Alexandrium fundyense blooms in Casco Bay, Gulf of Maine, April-June 1998. II. . Zooplankton abundance and size-fractionated community composition

    NASA Astrophysics Data System (ADS)

    Turner, Jefferson T.; Doucette, Gregory J.; Keafer, Bruce A.; Anderson, Donald M.

    2005-09-01

    During spring blooms of the toxic dinoflagellate Alexandrium fundyense in Casco Bay, Maine in 1998, we investigated vectorial intoxication of various zooplankton size fractions with PSP toxins, including zooplankton community composition from quantitative zooplankton samples (>102 μm), as well as zooplankton composition in relation to toxin levels in various size fractions (20-64, 64-100, 100-200, 200-500, >500 μm). Zooplankton abundance in 102 μm mesh samples was low (most values<10,000 animals m -3) from early April through early May, but increased to maxima in mid-June (cruise mean=121,500 animals m -3). Quantitative zooplankton samples (>102 μm) were dominated by copepod nauplii, and Oithona similis copepodites and adults at most locations except for those furthest inshore. At these inshore locations, Acartia hudsonica copepodites and adults were usually dominant. Larger copepods such as Calanus finmarchicus, Centropages typicus, and Pseudocalanus spp. were found primarily offshore, and at much lower abundances than O. similis. Rotifers, mainly present from late April to late May, were most abundant inshore. The marine cladoceran Evadne nordmani was sporadically abundant, particularly in mid-June. Microplankton in 20-64 μm size fractions was generally dominated by A. fundyense, non-toxic dinoflagellates, and tintinnids. Microplankton in 64-100 μm size fractions was generally dominated by larger non-toxic dinoflagellates, tintinnids, aloricate ciliates, and copepod nauplii, and in early May, rotifers. Some samples (23%) in the 64-100 μm size fractions contained abundant cells of A. fundyense, presumably due to sieve clogging, but most did not contain A. fundyense cells. This suggests that PSP toxin levels in those samples were due to vectorial intoxication of microzooplankters such as heterotrophic dinoflagellates, tintinnids, aloricate ciliates, rotifers, and copepod nauplii via feeding on A. fundyense cells. Dominant taxa in zooplankton fractions varied

  20. The three-isotope method for equilibrium isotope fractionation factor determination: Unfounded optimism

    NASA Astrophysics Data System (ADS)

    Cao, X.; Hayles, J. A.; Bao, H.

    2015-12-01

    The equilibrium isotope fractionation factor α is a fundamental parameter in stable isotope geochemistry. Although equilibrium α can be determined by theoretical calculation or by measurement of natural samples, direct laboratory experiments are ultimately required to verify those results. The attainment of a true exchange equilibrium in experiments is often difficult, but three methods have been devised and used to ensure that an equilibrium α has been obtained in an isotope exchange experiment. These are the two-directional method, partial-exchange method, and three-isotope method. Of these, the three-isotope method is thought to be the most rigorous. Using water-water exchange as a basic unit, we have developed a set of complex exchange models to study when and why the three-isotope method may work well or not. We found that the method cannot promise to lead to an equilibrium α before the kinetic complexity of the specific exchange experiment is known. An equilibrium point in δ17O-δ18O space can be reached only when all of the isotope exchange pathways are fully reversible, i.e. there is no mass loss at any instant, and the forward and backward reactions share the same pathway. If the exchange pathways are not fully reversible, steady state may be reached, but a steady state α can be very different from the equilibrium α. Our results validated the earlier warning that the trajectory for three-isotope evolution in δ17O-δ18O space may be a distinctly curved line or contain more than one straight line due to the non-fully reversible isotope exchange reactions. The three-isotope method for equilibrium α determination is not as rigorous or as promising as it may seem. Instead, the trajectory of three-isotope evolution provides detailed insights into the kinetics of isotope exchange between compounds. If multiple components exist in the exchange system, the δ17O-δ18O evolving trajectory would be more complex.

  1. Factors that influence the hydrologic recovery of wetlands in the Northern Tampa Bay area, Florida

    USGS Publications Warehouse

    Metz, P.A.

    2011-01-01

    Although of less importance than the other three factors, a low-lying topographical position benefited the hydrologic condition of several of the study wetlands (S-68 Cypress and W-12 Cypress) both before and after the reductions in groundwater withdrawals. Compared to wetlands in a higher topographical position, those in a lower position had longer hydroperiods because of their greater ability to receive more runoff from higher elevation wetlands and to establish surface-water connections to other isolated wetlands and surface-water bodies through low-lying surface-water channels during wet conditions. In addition, wetlands in low-lying areas benefited from groundwater inflow when groundwater levels were higher than wetland water levels.

  2. Uranium isotopic fractionation factors during U(VI) reduction by bacterial isolates

    NASA Astrophysics Data System (ADS)

    Basu, Anirban; Sanford, Robert A.; Johnson, Thomas M.; Lundstrom, Craig C.; Löffler, Frank E.

    2014-07-01

    We experimentally determined the magnitude of uranium isotopic fractionation induced by U(VI) reduction by metal reducing bacterial isolates. Our results indicate that microbial U(VI) reduction induces isotopic fractionation; heavier isotopes (i.e., 238U) partition into the solid U(IV) products. The magnitudes of isotopic fractionation (expressed as ε = 1000‰ * (α-1)) for 238U/235U were 0.68‰ ± 0.05‰ and 0.99‰ ± 0.12‰ for Geobacter sulfurreducens strain PCA and strain IFRC-N, respectively. The ε values for Anaeromyxobacter dehalogenans strain FRC-W, strain FRC-R5, a novel Shewanella isolate, and Desulfitobacterium sp. strain Viet1 were 0.72‰ ± 0.15‰, 0.99‰ ± 0.12‰, 0.96‰ ± 0.16‰ and 0.86‰ ± 0.06‰, respectively. Our results show that the maximum ε values of ∼1.0‰ were obtained with low biomass (∼107 cells/mL) and low electron donor concentrations (∼500 μM). These results provide an initial assessment of 238U/235U shifts induced by microbially-mediated U(VI) reduction, which is needed as 238U/235U data are increasingly applied as redox indicators in various geochemical settings.

  3. Determination of hexavalent chromium reduction using Cr stable isotopes: isotopic fractionation factors for permeable reactive barrier materials.

    PubMed

    Basu, Anirban; Johnson, Thomas M

    2012-05-15

    Cr stable isotope measurements can provide improved estimates of the extent of Cr(VI) reduction to less toxic Cr(III). The relationship between observed (53)Cr/(52)Cr ratio shifts and the extent of reduction can be calibrated by determining the isotopic fractionation factor for relevant reactions. Permeable reactive barriers (PRB) made of Fe(0) and in situ redox manipulation (ISRM) zones effectively remediate Cr-contaminated aquifers. Here, we determine the isotopic fractionations for dominant reductants in reactive barriers and reduced sediments obtained from an ISRM zone at the US DOE's Hanford site. In all cases, significant isotopic fractionation was observed; fractionation (expressed as ε) was -3.91‰ for Fe(II)-doped goethite, -2.11‰ for FeS, -2.65‰ for green rust, -2.67‰ for FeCO(3), and -3.18‰ for ISRM zone sediments. These results provide a better calibration of the relationship between Cr isotope ratios and the extent of Cr(VI) reduction and aid in interpretation of Cr isotope data from systems with reactive barriers. PMID:22424120

  4. INTERTIDAL SEDIMENT TEMPERATURE VARIANCE AS A POSSIBLE LIMITING FACTOR FOR EELGRASSES ZOSTERA MARINA AND ZOSTERA JAPONICA IN YAQUINA BAY, OR

    EPA Science Inventory

    The eelgrass species Zostera marina and Z. japonica co-occur in most Pacific Northwest estuaries; Z. marina is regarded as a native species, Z. japonica as non-indigenous, introduced in Yaquina Bay in approximately 1975. The mean tidal range is ~2 m, extreme ~3m. The vertical d...

  5. A Nonpolar Blueberry Fraction Blunts NADPH Oxidase Activation in Neuronal Cells Exposed to Tumor Necrosis Factor

    PubMed Central

    Gustafson, Sally J.; Dunlap, Kriya L.; McGill, Colin M.; Kuhn, Thomas B.

    2012-01-01

    Inflammation and oxidative stress are key to the progressive neuronal degeneration common to chronic pathologies, traumatic injuries, and aging processes in the CNS. The proinflammatory cytokine tumor necrosis factor-alpha (TNF-α) orchestrates cellular stress by stimulating the production and release of neurotoxic mediators including reactive oxygen species (ROS). NADPH oxidases (NOX), ubiquitously expressed in all cells, have recently emerged as pivotal ROS sources in aging and disease. We demonstrated the presence of potent NOX inhibitors in wild Alaska bog blueberries partitioning discretely into a nonpolar fraction with minimal antioxidant capacity and largely devoid of polyphenols. Incubation of SH-SY5Y human neuroblastoma cells with nonpolar blueberry fractions obstructed the coalescing of lipid rafts into large domains disrupting NOX assembly therein and abolishing ROS production characteristic for TNF-α exposure. These findings illuminate nutrition-derived lipid raft modulation as a novel therapeutic approach to blunt inflammatory and oxidative stress in the aging or diseased CNS. PMID:22530077

  6. Chlorinated hydrocarbon pesticides and polychlorinated biphenyls in sediment cores from San Francisco Bay

    USGS Publications Warehouse

    Venkatesan, M.I.; De Leon, R. P.; VanGeen, A.; Luoma, S.N.

    1999-01-01

    Sediment cores of known chronology from Richardson and San Pablo Bays in San Francisco Bay, CA, were analyzed for a suite of chlorinated hydrocarbon pesticides and polychlorinated biphenyls to reconstruct a historic record of inputs. Total DDTs (DDT = 2,4'- and 4,4'-dichlorodiphenyltrichloroethane and the metabolites, 2,4'- and 4,4'-DDE, -DDD) range in concentration from 4-21 ng/g and constitute a major fraction (> 84%) of the total pesticides in the top 70 cm of Richardson Bay sediment. A subsurface maximum corresponds to a peak deposition date of 1969-1974. The first measurable DDT levels are found in sediment deposited in the late 1930's. The higher DDT inventory in the San Pablo relative to the Richardson Bay core probably reflects the greater proximity of San Pablo Bay to agricultural activities in the watershed of the Sacramento and San Joaquin rivers. Total polychlorinated biphenyls (PCBs) occur at comparable levels in the two Bays (< 1-34 ng/g). PCBs are first detected in sediment deposited during the 1930's in Richardson Bay, about a decade earlier than the onset of detectable levels of DDTs. PCB inventories in San Pablo Bay are about a factor of four higher in the last four decades than in Richardson Bay, suggesting a distribution of inputs not as strongly weighed towards the upper reaches of the estuary as DDTs. The shallower subsurface maximum in PCBs compared to DDT in the San Pablo Bay core is consistent with the imposition of drastic source control measures four these constituents in 1970 and 1977 respectively. The observed decline in DDT and PCB levels towards the surface of both cores is consistent with a dramatic drop in the input of these pollutants once the effect of sediment resuspension and mixing is taken into account.

  7. James Bay

    Atmospheric Science Data Center

    2013-04-17

    article title:  First Views of James Bay, Canada     View Larger ... for NASA's Science Mission Directorate, Washington, D.C. The Terra spacecraft is managed by NASA's Goddard Space Flight Center, Greenbelt, ...

  8. Review of Exculsive B to D(*,**)Lnu Decays: Branching Fractions, Form-Factors And |V(Cb|

    SciTech Connect

    Snyder, A.E.; /SLAC

    2007-04-02

    This paper reviews semileptonic decays of B-mesons to states containing charm mesons, i.e., D, D*, D** and possible non-resonant D{sup (*)}{eta}{pi} states as well. The paper covers measurement of branching fractions, form-factors and, most importantly, the magnitude of the CKM matrix element V{sub cb}. I will not attempt a comprehensive review, but will concentrate on reasonably fresh results and consider mostly exclusive measurements. I will also comment on the consistency of the results and what needs to be done to resolve the apparent conflicts.

  9. Digoxin in Heart Failure with a Reduced Ejection Fraction: A Risk Factor or a Risk Marker.

    PubMed

    Konstantinou, Dimitrios M; Karvounis, Haralambos; Giannakoulas, George

    2016-01-01

    Digoxin is one of the oldest compounds used in cardiovascular medicine. Nevertheless, its mechanism of action and most importantly its clinical utility have been the subject of an endless dispute. Positive inotropic and neurohormonal modulation properties are attributed to digoxin, and it was the mainstay of heart failure therapeutics for decades. However, since the institution of β-blockers and aldosterone antagonists as part of modern heart failure medical therapy, digoxin prescription rates have been in free fall. The fact that digoxin is still listed as a valid therapeutic option in both American and European heart failure guidelines has not altered clinicians' attitude towards the drug. Since the publication of original Digitalis Investigation Group trial data, a series of reports based predominately on observational studies and post hoc analyses have raised concerns about the clinical efficacy and long-term safety of digoxin. In the present review, we will attempt a critical appraisal of the available clinical evidence regarding the efficacy and safety of digoxin in heart failure patients with a reduced ejection fraction. The methodological issues, strengths, and limitations of individual studies will be highlighted. PMID:26959501

  10. Equilibrium and kinetic Si isotope fractionation factors and their implications on Si isotope distributions in the Earth's surface environments

    NASA Astrophysics Data System (ADS)

    Tang, M.; Zhang, S.; Liu, Y.

    2015-12-01

    Several important equilibrium Si isotope fractionation factors among minerals, organic molecules and the H4SiO4 solution are complemented to facilitate explanation of distributions of Si isotope in the Earth's surface environments. The results reveal that heavy Si isotopes will be significantly enriched in the secondary silicate minerals in comparison to aqueous H4SiO4. On the contrary, quadra-coordinated organosilicon complexes are enriched in light silicon isotope relative to the solution. The extent of 28Si-enrichment in hyper-coordinated organosilicon complexes is found the largest. In addition, the large kinetic isotope effect associated with the polymerization of monosilicic acid and dimer is calculated and the result supports previous statement that highly 28Si-enrichment in the formation of amorphous quartz precursor contributes to the discrepancy between theoretical calculations and field observations. With equilibrium Si isotope fractionation factors provided here, Si isotope distributions in many surface systems of the Earth can be explained. For example, the change of bulk soil δ30Si can be predicted as a concave pattern with respect to weathering degree, with the minimum value where allophane completely dissolves and the total amount of sesqui-oxides and poorly crystalline minerals reaches its maximum. When well-crystallized clays start to precipitate from pore solutions under equilibrium conditions, the bulk soil δ30Si will increase again and reach a constant value. Similarly, the precipitation of crystalline smectite and the dissolution of poorly crystalline kaolinite may explain δ30Si variations in the ground water profile. Equilibrium Si isotope fractionations among quadra-coordinated organosilicon complexes and the H4SiO4 solution may also shed the light on the Si isotope distributions in Si-accumulating plants.

  11. First Principles Calculation on Equilibrium Si Isotope Fractionation Factors and its Implementation on Si Isotope Distributions in Earth Surface Environments

    NASA Astrophysics Data System (ADS)

    Liu, Y.; He, H. T.; Zhu, C.

    2014-12-01

    Several important equilibrium Si isotope fractionation factors are calculated here. We use a so-called volume-variable-cluster-model (VVCM) method for solids and the "water-droplet" method for aqueous species for isotope fractionation calculation at the same quantum chemistry level. The calculation results show that several silicate minerals, such as quartz, feldspar, kaolinite, etc., all enrich heavy Si isotopes relative to aqueous H4SiO4 and can be up to 3.3‰ at 25°C, different from most field observations. Meanwhile stable organosilicon complexes can enrich even lighter Si isotopes than aqueous H4SiO4. For explaining the difference between the calculation results and field observations, we calculate the kinetic isotope effect (KIE) associated with the formation of amorphous silica, and find that amorphous silica will enrich extremely light Si isotopes. From amorphous silica to crystalline quartz, the structural adjustment & transition needs getting rid of small amount of Si to re-organize the structure. Light Si isotopes will be preferentially lost and let the final crystalline quartz with a little bit more heavy Si isotopes. However, such late-stage Si heavy isotope enrichment cannot erase the total isotopic signal, crystalline quartz still inherit much light Si isotopic composition from amorphous quartz. That is the reason for the discrepancy between the calculation results and the field observations, because the formation of amorphous quartz is under a non-equilibrium process but theoretical calculations are for equilibrium isotope fractionations. With accurate equilibrium fractionation factors provided here, Si isotope distributions in earth surface environments including soil, groundwater and plants can be further interpreted. We find that δ30Si variations in soil are mainly driven by secondary minerals precipitation and adsorption. Also, bulk soil δ30Si maybe have a parabolic distribution with soil age, with a minimum value at where allophane is

  12. Value of epidermal growth factor receptor status compared with growth fraction and other factors for prognosis in early breast cancer.

    PubMed Central

    Gasparini, G.; Bevilacqua, P.; Pozza, F.; Meli, S.; Boracchi, P.; Marubini, E.; Sainsbury, J. R.

    1992-01-01

    The epidermal growth factor receptor (EGFR) is a transmembrane glycoprotein whose expression is important in the regulation of breast cancer cell growth. The relationship between EGFR status (determined by an immunocytochemical assay) and various prognostic factors was investigated in 164 primary breast cancers. Overall 56% of tumours were EGFR-positive and the expression of EGFR was unrelated to axillary node status, tumour size and histological grade; and it was poorly associated with the tumour proliferative activity measured by Ki-67 immuno-cytochemistry. The relapse-free survival (RFS) probability at 3-years was significantly worse for patients with EGFR positive tumours (P = 0.003) and for those whose Ki-67 score was > 7.5% (P = 0.0027), as well as in patients with axillary node involvement (P = 0.01) and with poorly differentiated tumours (P = 0.04). Immunocytochemical determination of EGFR and cell kinetics gave superimposable prognostic information for predicting RFS with odds ratios of 3.51, when evaluated singly. In our series of patients EGFR, Ki-67 and node status retain their prognostic value concerning RFS in multivariate analysis. The 3-year probability of overall survival (OS) was significantly better in node-negative patients (P = 0.04) and was similar in EGFR-positive and negative patients. In conclusion, EGFR status appears to be a significant and independent indicator of recurrence in human breast cancer and the concomitant measurement of the tumour proliferative activity seems to improve the selection of patients with different risks of recurrence. PMID:1419645

  13. Fraction Reduction through Continued Fractions

    ERIC Educational Resources Information Center

    Carley, Holly

    2011-01-01

    This article presents a method of reducing fractions without factoring. The ideas presented may be useful as a project for motivated students in an undergraduate number theory course. The discussion is related to the Euclidean Algorithm and its variations may lead to projects or early examples involving efficiency of an algorithm.

  14. Interactions between aggregations and environmental factors explain spatio-temporal patterns of the brittle-star Ophiothrix fragilis in the eastern Bay of Seine

    NASA Astrophysics Data System (ADS)

    Dauvin, Jean-Claude; Méar, Yann; Murat, Anne; Poizot, Emmanuel; Lozach, Sophie; Beryouni, Khadija

    2013-10-01

    There is a paucity of studies showing long-term changes in the population dynamics of dominant benthic epifaunal species, especially echinoderms, in relation to biological and environmental factors. In the English Channel, the brittle-star Ophiothrix fragilis is a common epifaunal species, mainly found in strong tidal currents characterised by benthic habitats with pebbles. However, in the Bay of Seine, O. fragilis lives on gravel and coarse sandy sediments; more locally, it occurs where there are unexpected amounts of fine particles for such high hydrodynamic areas. This species forms dense aggregations, supporting large populations up to 7450 ind m-2. This paper analyses the long-term spatio-temporal changes of O. fragilis aggregations over the last 25 years in the eastern part of the Bay of Seine through observations obtained from several scientific programmes from 1986 to 2010. This area is characterised as a tidal environment affected by the Seine estuary and is subject to potential sediment supply from the dumping site of the Le Havre harbour dredging operations. During all surveys, there was a similar pattern: persistent patches with high abundances of O. fragilis and sites without O. fragilis, showing that there was a high heterogeneity of the spatial population pattern. Interactions between environmental conditions and ophiurid aggregations (e.g., storm waves, Seine floods and patches) are suggested to explain these patterns.

  15. Transcription Factor EB Is Selectively Reduced in the Nuclear Fractions of Alzheimer's and Amyotrophic Lateral Sclerosis Brains

    PubMed Central

    Wang, Hongjie

    2016-01-01

    Multiple studies suggest that autophagy is strongly dysregulated in Alzheimer's disease (AD) and amyotrophic lateral sclerosis (ALS), as evidenced by accumulation of numerous autophagosomes, lysosomes with discontinuous membranes, and aggregated proteins in the patients' brains. Transcription factor EB (TFEB) was recently discovered to be a master regulator of lysosome biogenesis and autophagy. To examine whether aberrant autophagy in AD and ALS is due to alterations in TFEB expression, we systematically quantified the levels of TFEB in these brains by immunoblotting. Interestingly, cytoplasmic fractions of AD brains showed increased levels of normalized (to tubulin) TFEB only at Braak stage IV (61%, p < 0.01). Most importantly, normalized (to lamin) TFEB levels in the nuclear fractions were consistently reduced starting from Braak stage IV (52%, p < 0.01), stage V (67%, p < 0.01), and stage VI (85%, p < 0.01) when compared to normal control (NC) brains. In the ALS brains also, nuclear TFEB levels were reduced by 62% (p < 0.001). These data suggest that nuclear TFEB is selectively lost in ALS as well as AD brains, in which TFEB reduction was Braak-stage-dependent. Taken together, the observed reductions in TFEB protein levels may be responsible for the widely reported autophagy defects in these disorders. PMID:27433468

  16. Narragansett Bay

    EPA Science Inventory

    Narragansett Bay, situated on the eastern side of Rhode Island, comprises about 15% of the State’s total area. Ninety-five percent of the Bay’s surface area is in Rhode Island with the remainder in southeastern Massachusetts; 60% of the Bay’s watershed is in Massachusetts. At the...

  17. James Bay

    Atmospheric Science Data Center

    2013-04-17

    article title:  First Light over James Bay     View Larger Image MISR "First light", 16:40 UTC, 24 February 2000 . This is the first image of Earth's ... the line of flight. At the top of the image, the dark-to-light transition captures the opening of the MISR cover. Progressing southward, ...

  18. James Bay

    Atmospheric Science Data Center

    2013-04-17

    article title:  Green Summer and Icy Winter in James Bay     View Larger Image ... winter. The left-hand image was acquired on August 9, 2000 (Terra orbit 3427), and the right-hand image is from January 16, 2001 (Terra ...

  19. Physical factors determining the fraction of stored energy recoverable from hydrothermal convection systems and conduction-dominated areas

    USGS Publications Warehouse

    Nathenson, Manuel

    1975-01-01

    This report contains background analyses for the estimates of Nathenson and Muffler (1975) of geothermal resources in hydrothermal convection systems and conduction-dominated areas. The first section discusses heat and fluid recharge potential of geothermal reservoirs. The second section analyzes the physical factors that determine the fraction of stored energy obtainable at the surface from a geothermal reservoir. Conversion of heat to electricity and the use of geothermal energy for direct-heating applications are discussed in the last two sections. Nathenson, Manuel, and Muffler, L.J.P., 1975, Geothermal resources in hydrothermal convection systems and conduction dominated areas, in White, D.E., and Williams, D.L., eds., Assessment of the Geothermal Resources of the United States--1975: U.S. Geological Survey Circular 726, p. 104-121, available at http://pubs.er.usgs.gov/usgspubs/cir/cir726

  20. Evaluation of potential protective factors against metabolic syndrome in bottlenose dolphins: feeding and activity patterns of dolphins in sarasota bay, Florida.

    PubMed

    Wells, Randall S; McHugh, Katherine A; Douglas, David C; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B; Phillips, Goldie T

    2013-01-01

    Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10-20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins.

  1. Is drinking water a risk factor for endemic cryptosporidiosis? A case-control study in the immunocompetent general population of the San Francisco Bay Area

    PubMed Central

    Khalakdina, Asheena; Vugia, Duc J; Nadle, Joelle; Rothrock, Gretchen A; Colford, John M

    2003-01-01

    Background Cryptosporidiosis, caused by Cryptosporidium, is an enteric illness that has received much attention as an infection of immunocompromised persons as well as in community outbreaks (frequently waterborne). There are, however, no studies of the risk factors for sporadic community-acquired cryptosporidiosis in the immunocompetent US population. We undertook a case-control study in the San Francisco Bay Area as part of a national study sponsored by the Centers for Disease Control and Prevention to ascertain the major routes of transmission for endemic cryptosporidiosis, with an emphasis on evaluating risk from drinking water. Methods Cases were recruited from a population-based, active surveillance system and age-matched controls were recruited using sequential random-digit dialing. Cases (n = 26) and controls (n = 62) were interviewed by telephone using a standardized questionnaire that included information about the following exposures: drinking water, recreational water, food items, travel, animal contact, and person-to-person fecal contact, and (for adults) sexual practices. Results In multivariate conditional logistic regression analyses no significant association with drinking water was detected. The major risk factor for cryptosporidiosis in the San Francisco Bay Area was travel to another country (matched odds ratio [95% confidence interval]: 24.1 [2.6, 220]). Conclusion The results of this study do not support the hypothesis that drinking water is an independent risk factor for cryptosporidiosis among the immunocompetent population. These findings should be used to design larger studies of endemic cryptosporidiosis to elucidate the precise mechanisms of transmission, whether waterborne or other. PMID:12689343

  2. Evaluation of potential protective factors against metabolic syndrome in bottlenose dolphins:feeding and activity patterns of dolphins in Sarasota Bay, Florida

    USGS Publications Warehouse

    Wells, Randall S.; McHugh, Katherine A.; Douglas, David C.; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B.; Phillips, Goldie T.

    2014-01-01

    Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins.

  3. Evaluation of Potential Protective Factors Against Metabolic Syndrome in Bottlenose Dolphins: Feeding and Activity Patterns of Dolphins in Sarasota Bay, Florida

    PubMed Central

    Wells, Randall S.; McHugh, Katherine A.; Douglas, David C.; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B.; Phillips, Goldie T.

    2013-01-01

    Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins. PMID:24133483

  4. Effects of comprehensive function of factors on retention behavior of microparticles in gravitational field-flow fractionation.

    PubMed

    Guo, Shuang; Qiu, Bai-Ling; Zhu, Chen-Qi; Yang, Ya-Ya Gao; Wu, Di; Liang, Qi-Hui; Han, Nan-Yin

    2016-09-15

    Gravitational field-flow fractionation (GrFFF) is a useful technique for separation and characterization for micrometer-sized particles. Elution behavior of micrometer-sized particles in GrFFF was researched in this study. Particles in GrFFF channel are subject to hydrodynamic lift forces (HLF), fluid inertial forces and gravity, which drive them to different velocities by carrier flow, resulting in a size-based separation. Effects of ionic strength, flow rate and viscosity as well as methanol were investigated using polystyrene latex beads as model particles. This study is devoted to experimental verification of the effect of every factor and their comprehensive function. All experiments were performed to show isolated influence of every variable factor. The orthogonal design test was used to evaluate various factors comprehensively. Results suggested that retention ratio of particles increases with increasing flow rate or the viscosity of carrier liquid by adjusting external forces acting on particles. In addition, retention ratio increases as ionic strength decreases because of decreased electrostatic repulsion between particles and channel accumulation wall. As far as methanol, there is no general trend due to the change of both density and viscosity. On the basis of orthogonal design test it was found that viscosity of carrier liquid plays a significant role in determining resolution of micrometer-sized particles in GrFFF. PMID:27447927

  5. Prevalence and Risk Factors of Heart Failure with Preserved Ejection Fraction: A Population-Based Study in Northeast China

    PubMed Central

    Guo, Liang; Guo, Xiaofan; Chang, Ye; Yang, Jun; Zhang, Limin; Li, Tan; Sun, Yingxian

    2016-01-01

    Background: Heart failure with preserved ejection fraction (HFpEF) has attracted increasing attention worldwide. We aimed to estimate the prevalence of HFpEF and analyze its correlates in a sample of residents of northeast China; Methods: A population-based study of 2230 participants ≥35 years old was conducted in rural areas of Liaoning Province from January 2012 through August 2013. Information about lifestyle and other potential risk factors was obtained. HFpEF was diagnosed according to the recommendations of European Society of Cardiology; Results: The overall prevalence of HFpEF was 3.5% (1.8% in men and 4.9% in women). The prevalence of HFpEF increased with age in both genders and was greater in women than in men for every age group. Multivariable logistic regression analysis found that female gender (OR, 3.575; 95% CI, 1.761–7.256), hypertension (OR, 3.711; 95% CI, 2.064–6.674), and history of heart disease (2.086; 95% CI, 1.243–3.498) were associated factors for prevalent HFpEF; Conclusions: In a general population from rural northeast China, we found that female gender, hypertension, and history of heart disease were risk factors for prevalent HFpEF. PMID:27483300

  6. Patient factors influencing the concentration of stromal vascular fraction (SVF) for adipose-derived stromal cell (ASC) therapy in dogs.

    PubMed

    Astor, Donniel E; Hoelzler, Michael G; Harman, Robert; Bastian, Richard P

    2013-07-01

    The objective of this study was to determine whether patient factors influence the concentration of the stromal vascular fraction (SVF) in fat for adipose-derived stromal cell (ASC) therapy in dogs. A total of 1265 dogs underwent adipose collection surgeries by veterinarians for processing by the Vet-Stem laboratory and data on cell counts and patient factors were collected. Body condition score (BCS) and breed size did not significantly affect the viable cells per gram (VCPG) of adipose tissue that represents the viable SVF. Age significantly affected the VCPG, with dogs in age quartile 1 having a significantly higher VCPG than those in quartile 2 (P = 0.003) and quartile 4 (P = 0.002). Adipose tissue collected at the falciform location had significantly fewer VCPG than tissue collected at the thoracic wall and inguinal locations (P < 0.001). When the interaction of gender and location was evaluated, there were significantly fewer VCPG in tissue collected at the falciform location than at the thoracic wall and inguinal locations in female spayed dogs (P < 0.001) and male neutered dogs (P < 0.001), but not in female intact dogs (P = 0.743) or male intact dogs (P = 0.208). It was concluded that specific patient factors should be taken into consideration in order to obtain the maximal yield of VCPG from an adipose collection procedure.

  7. Attached, unattached fraction of progeny concentrations and equilibrium factor for dose assessments from (222)Rn and (220)Rn.

    PubMed

    Singh, Parminder; Saini, Komal; Mishra, Rosaline; Sahoo, Bijay Kumar; Bajwa, Bikramjit Singh

    2016-08-01

    In this study, measurements of indoor radon ((222)Rn), thoron ((220)Rn) and their equilibrium equivalent concentration (EEC) were carried out in 96 dwellings from 22 different villages situated in Hamirpur district, Himachal Pradesh, India, by using LR-115 type II-based pinhole twin cup dosimeters and deposition-based progeny sensors (DRPS/DTPS). The annual average indoor (222)Rn and (220)Rn concentrations observed in these dwellings were 63.82 and 89.59 Bq/m(3), respectively, while the average EEC (attached + unattached) for (222)Rn and (220)Rn was 29.28 and 2.74 Bq/m(3). For (222)Rn (f Rn) and (220)Rn (f Tn), the average values of unattached fraction were 0.11 and 0.09, respectively. The equilibrium factors for radon (F Rn) and thoron (F Tn) varied from 0.12 to 0.77 with an average of 0.50, and from 0.01 to 0.34 with an average of 0.05, respectively. The annual inhalation dose due to mouth and nasal breathing was calculated using dose conversion factors and unattached fractions. The indoor annual effective doses for (222)Rn (AEDR) and (220)Rn (AEDT) were found to be 1.92 and 0.83 mSv a(-1), respectively. The values of (222)Rn/(220)Rn concentrations and annual effective doses obtained in the present study are within the safe limits as recommended by the International Commission on Radiological Protection for indoor dwelling exposure conditions. PMID:27289385

  8. Attached, unattached fraction of progeny concentrations and equilibrium factor for dose assessments from (222)Rn and (220)Rn.

    PubMed

    Singh, Parminder; Saini, Komal; Mishra, Rosaline; Sahoo, Bijay Kumar; Bajwa, Bikramjit Singh

    2016-08-01

    In this study, measurements of indoor radon ((222)Rn), thoron ((220)Rn) and their equilibrium equivalent concentration (EEC) were carried out in 96 dwellings from 22 different villages situated in Hamirpur district, Himachal Pradesh, India, by using LR-115 type II-based pinhole twin cup dosimeters and deposition-based progeny sensors (DRPS/DTPS). The annual average indoor (222)Rn and (220)Rn concentrations observed in these dwellings were 63.82 and 89.59 Bq/m(3), respectively, while the average EEC (attached + unattached) for (222)Rn and (220)Rn was 29.28 and 2.74 Bq/m(3). For (222)Rn (f Rn) and (220)Rn (f Tn), the average values of unattached fraction were 0.11 and 0.09, respectively. The equilibrium factors for radon (F Rn) and thoron (F Tn) varied from 0.12 to 0.77 with an average of 0.50, and from 0.01 to 0.34 with an average of 0.05, respectively. The annual inhalation dose due to mouth and nasal breathing was calculated using dose conversion factors and unattached fractions. The indoor annual effective doses for (222)Rn (AEDR) and (220)Rn (AEDT) were found to be 1.92 and 0.83 mSv a(-1), respectively. The values of (222)Rn/(220)Rn concentrations and annual effective doses obtained in the present study are within the safe limits as recommended by the International Commission on Radiological Protection for indoor dwelling exposure conditions.

  9. Association of Modifiable Risk Factors and Left Ventricular Ejection Fraction among Hospitalized Native Hawaiians and Pacific Islanders with Heart Failure

    PubMed Central

    Seto, Todd B; Kaholokula, Joseph K; Howard, Barbara; Ratner, Robert E

    2014-01-01

    Background: Heart Failure (HF) disproportionately affects Native Hawaiians and Other Pacific Islanders (NHOPIs). This study examines risk factors associated with left ventricular ejection fraction (LVEF) among 151 hospitalized NHOPI HF patients enrolled at a single tertiary care hospital between June 2006 and April 2010. Methods: Enrollment criteria: (1) NHOPI by self-identification. (2) Age ≥ 21 yrs. (3) Diagnosis of HF defined: (a) left ventricular ejection fraction (LVEF) ≤ 40% or LVEF ≤ 60% with abnormal diastolic function and (b) classic HF signs/symptoms. LVEF was measured by echocardiography within 6 weeks of hospitalization. Clinical measures, medical history, and questionnaires were assessed using standardized protocols. Linear regression modeling was used to examine the association of significant correlates of LVEF, which were then included en bloc into the final model. A P-value < .05 was considered statistically significant. Results: Of 151 participants, 69% were men, mean age 54.3 ± 13.5 years, blood pressure 112 ± 20/69 ± 15 mmHg, and body mass index (BMI) 36.9 ± 9 kg/m2. Twenty-five percent of participants were smokers, 45% used alcohol and 23% reported a history of methamphetamine use. Clinically, 72% had hypertension, 49% were diabetic and 37% had a prior myocardial infarction. Nearly 60% had moderate to severe LVEF (< 35%). Higher LVEF was independently associated with female sex and greater BMI (P < .04) while pacemaker/defibrillator and methamphetamine use was independently associated with lower LVEF (P < .05). Conclusions: Methamphetamine use and BMI may be important modifiable risk factors associated with LVEF and may be important targets for improving HF morbidity and mortality. PMID:25535596

  10. Direct measurement of the boron isotope fractionation factor: Reducing the uncertainty in reconstructing ocean paleo-pH

    NASA Astrophysics Data System (ADS)

    Nir, Oded; Vengosh, Avner; Harkness, Jennifer S.; Dwyer, Gary S.; Lahav, Ori

    2015-03-01

    The boron isotopic composition of calcium carbonate skeletons is a promising proxy method for reconstructing paleo-ocean pH and atmospheric CO2 from the geological record. Although the boron isotope methodology has been used extensively over the past two decades to determine ancient ocean-pH, the actual value of the boron isotope fractionation factor (εB) between the two main dissolved boron species, 11B(OH)3 and 10B(OH)-4, has remained uncertain. Initially, εB values were theoretically computed from vibrational frequencies of boron species, resulting in a value of ∼ 19 ‰. Later, spectrophotometric pH measurements on artificial seawater suggested a higher value of ∼ 27 ‰. A few independent theoretical models also pointed to a higher εB value. Here we provide, for the first time, an independent empirical fractionation factor (εB = 26.0 ± 1.0 ‰ ; 25 °C), determined by direct measurements of B(OH)3 in seawater and other solutions. Boric acid was isolated by preferential passage through a reverse osmosis membrane under controlled pH conditions. We further demonstrate that applying the Pitzer ion-interaction approach, combined with ion-pairing calculations, results in a more accurate determination of species distribution in aquatic solutions of different chemical composition, relative to the traditional two-species boron-system approach. We show that using the revised approach reduces both the error in simulating ancient atmospheric CO2 (by up to 21%) and the overall uncertainty of applying boron isotopes for paleo-pH reconstruction. Combined, this revised methodology lays the foundation for a more accurate determination of ocean paleo-pH through time.

  11. Neglected role of hookah and opium in gastric carcinogenesis: a cohort study on risk factors and attributable fractions.

    PubMed

    Sadjadi, Alireza; Derakhshan, Mohammad H; Yazdanbod, Abbas; Boreiri, Majid; Parsaeian, Mahbubeh; Babaei, Masoud; Alimohammadian, Masoomeh; Samadi, Fatemeh; Etemadi, Arash; Pourfarzi, Farhad; Ahmadi, Emad; Delavari, Alireza; Islami, Farhad; Farzadfar, Farshad; Sotoudeh, Masoud; Nikmanesh, Arash; Alizadeh, Behrooz Z; de Bock, Geertruida H; Malekzadeh, Reza

    2014-01-01

    A recent study showed an association between hookah/opium use and gastric cancer but no study has investigated the relationship with gastric precancerous lesions. We examined the association between hookah/opium and gastric precancerous lesions and subsequent gastric cancer. In a population-based cohort study, 928 randomly selected, healthy, Helicobacter pylori-infected subjects in Ardabil Province, Iran, were followed for 10 years. The association between baseline precancerous lesions and lifestyle risk factors (including hookah/opium) was analyzed using logistic regression and presented as odds ratios (ORs) and 95% confidence intervals (CIs). We also calculated hazard ratios (HRs) and 95% CIs for the associations of lifestyle risk factors and endoscopic and histological parameters with incident gastric cancers using Cox regression models. Additionally, the proportion of cancers attributable to modifiable risk factors was calculated. During 9,096 person-years of follow-up, 36 new cases of gastric cancer were observed (incidence rate: 3.96/1,000 persons-years). Opium consumption was strongly associated with baseline antral (OR: 3.2; 95% CI: 1.2-9.1) and body intestinal metaplasia (OR: 7.3; 95% CI: 2.5-21.5). Opium (HR: 3.2; 95% CI: 1.4-7.7), hookah (HR: 3.4; 95% CI: 1.7-7.1) and cigarette use (HR: 3.2; 95% CI: 1.4-7.5), as well as high salt intake, family history of gastric cancer, gastric ulcer and histological atrophic gastritis and intestinal metaplasia of body were associated with higher risk of gastric cancer. The fraction of cancers attributable jointly to high salt, low fruit intake, smoking (including hookah) and opium was 93% (95% CI: 83-98). Hookah and opium use are risk factors for gastric cancer as well as for precancerous lesions. Hookah, opium, cigarette and high salt intake are important modifiable risk factors in this high-incidence gastric cancer area.

  12. Simulating speleothem growth in the laboratory: Determination of stable isotope fractionation factors during precipitation of speleothem calcite

    NASA Astrophysics Data System (ADS)

    Hansen, Maximilian; Schöne, Bernd R.; Spötl, Christoph; Scholz, Denis

    2016-04-01

    We present laboratory experiments aiming to understand the processes affecting the δ13C and δ18O values of speleothems during precipitation of calcite from a thin layer of solution. In particular, we determined the precipitation rates and the isotope fractionation factors in dependence of several parameters, such as temperature, cave pCO2 and supersaturation with respect to calcite. The experiments were performed in a climate box in order to simulate cave conditions and to control them during the experiments[1]. In the experiments, a thin film of a CaCO3-CO2-H2O-solution supersaturated with respect to calcite flew down an inclined marble surface or a sand-blasted borosilicate glass plate, and the drip water was sampled at different distances and, thus, residence times on the plate. Subsequently, pH, electrical conductivity and the δ13C and δ18O values of the dissolved inorganic carbon (DIC) as well as the precipitated CaCO3 were determined. In addition, we determined the stable isotope values of the drip water and the atmosphere inside the box during the experiments. This enabled the identification of carbon and oxygen isotope fractionation factors between all carbonate species. The experiments were conducted at 10, 20 and 30 ° C, a pCO2 of 1000 and 3000 ppmV and with a Ca2+ concentration of 2 and 5 mmol/l. We observed an exponential decay of conductivity with increasing distance of flow documenting progressive precipitation of calcite confirming previous observations[2]. The corresponding time constants of precipitation range from 180 to 660 s. Both the δ13C and δ18O values show a progressive increase along the flow path. The enrichment of the δ13C values seems to be strongly influenced by kinetic isotope fractionation, whereas the δ18O values are in the range of isotopic equilibrium. The fractionation between the precipitated CaCO3 and DIC is between -1 and - 6.5 ‰ for carbon isotopes (13ɛ) and between -1.5 and -3 ‰ for oxygen isotopes (18ɛ). The

  13. Histologic findings in free-ranging Sarasota Bay bottlenose dolphin (Tursiops truncatus) skin: mercury, selenium, and seasonal factors.

    PubMed

    Miller, Debra L; Woshner, Victoria; Styer, Eloise L; Ferguson, Sylvia; Knott, Katrina K; Gray, Matthew J; Wells, Randall S; O'Hara, Todd M

    2011-10-01

    Full-thickness epidermal biopsy samples were collected from free-ranging common bottlenose dolphins (Tursiops truncatus) in Sarasota Bay, Florida, USA. Season (summer or winter) of collection, mercury (Hg) concentration, and selenium (Se) concentration were compared to histologic parameters. Epidermal Hg concentration was positively related to age (P<0.001) and negatively related to height of the stratum spinosum (P<0.05). The mitotic index and heights of the stratum externum and intermedium were lower in summer than in winter (P<0.01). Transmission electron microscopic examination revealed variation in the diameters (60-138 nm) and arrangements of collagen fibers, regardless of age or concentrations of Hg and Se. The significance of the variation in height of the stratum spinosum and the perivascular collagen degeneration to dolphin health need further investigation. PMID:22102676

  14. Regulation of adipogenesis by paracrine factors from adipose stromal-vascular fraction - a link to fat depot-specific differences.

    PubMed

    Meissburger, Bettina; Perdikari, Aliki; Moest, Hansjörg; Müller, Sebastian; Geiger, Matthias; Wolfrum, Christian

    2016-09-01

    Visceral and subcutaneous adipose tissue depots have distinct features and contribute differentially to the development of metabolic dysfunction. We show here that adipocyte differentiation in subcutaneous stromal-vascular fraction (SVF) is increased compared to visceral SVF, however this increased differentiation capacity seems not to be due to changes in the number of adipocyte precursor cells. Rather, we demonstrate that secreted heat-sensitive factors from the SVF can inhibit adipocyte differentiation and that this effect is higher in visceral than in subcutaneous SVF, suggesting that visceral SVF is a source of secreted factors that can inhibit adipocyte formation. In order to explore secreted proteins that potentially inhibit differentiation in visceral preadipocytes we analyzed the secretome of both SVFs which led to the identification of 113 secreted proteins with an overlap of 42%. Further expression analysis in both depots revealed 16 candidates that were subsequently analyzed in a differentiation screen using an adenoviral knockdown system. From this analysis we were able to identify two potential inhibitory candidates, namely decorin (Dcn) and Sparc-like 1 (Sparcl1). We could show that ablation of either candidate enhanced adipogenesis in visceral preadipocytes, while treatment of primary cultures with recombinant Sparcl1 and Dcn blocked adipogenesis in a dose dependent manner. In conclusion, our data suggests that the differences in adipogenesis between depots might be due to paracrine and autocrine feedback mechanisms which could in turn contribute to metabolic homeostasis. PMID:27317982

  15. Factors affecting recall rate and false positive fraction in breast cancer screening with breast tomosynthesis - A statistical approach.

    PubMed

    Rosso, Aldana; Lång, Kristina; Petersson, Ingemar F; Zackrisson, Sophia

    2015-10-01

    In this study, we investigate which factors affect the false positive fraction (FPF) for digital breast tomosynthesis (DBT) compared to digital mammography (DM) in a screening population by using classification and regression trees (C&RT) and binary marginal generalized linear models. The data was obtained from the Malmö Breast Tomosynthesis Screening Trial, which aimed to compare the performance of DBT to DM in breast cancer screening. By using data from the first half of the study population (7500 women), a tree with the recall probability for different groups was calculated. The effect of age and breast density on the FPF was estimated using a binary marginal generalized linear model. Our results show that breast density and breast cancer were the main factors influencing recall. The FPF is mainly affected by breast density and increases with breast density for DBT and DM. In conclusion, the results obtained with C&RT are easy to interpret and similar to those obtained using binary marginal generalized linear models. The FPF is approximately 40% higher for DBT compared to DM for all breast density categories.

  16. Temporal trends and bioavailability assessment of heavy metals in the sediments of Deception Bay, Queensland, Australia.

    PubMed

    Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

    2014-12-15

    Thirteen sites in Deception Bay, Queensland, Australia were sampled three times over a period of 7 months and assessed for contamination by a range of heavy metals, primarily As, Cd, Cr, Cu, Pb and Hg. Fraction analysis, enrichment factors and Principal Components Analysis-Absolute Principal Component Scores (PCA-APCS) analysis were conducted in order to identify the potential bioavailability of these elements of concern and their sources. Hg and Te were identified as the elements of highest enrichment in Deception Bay while marine sediments, shipping and antifouling agents were identified as the sources of the Weak Acid Extractable Metals (WE-M), with antifouling agents showing long residence time for mercury contamination. This has significant implications for the future of monitoring and regulation of heavy metal contamination within Deception Bay. PMID:25440195

  17. Linking seasonal inorganic nitrogen shift to the dynamics of microbial communities in the Chesapeake Bay.

    PubMed

    Hong, Yiguo; Xu, Xiongrong; Kan, Jinjun; Chen, Feng

    2014-04-01

    Seasonal shifts of dissolved inorganic nitrogen (DIN) and the dynamics of microbial communities for nitrogen transformation were investigated in the water column of Chesapeake Bay. The relative abundance of nitrogen over phosphorus (N) showed a strong seasonal and spatial pattern: gradually decreased from upstream to downstream; high in winter and low in summer. Because the phosphorus concentration remained relatively stable, the spatiotemporal pattern of N implied that a substantial fraction of DIN was removed in the bay, especially in summer. Correlation analyses indicated the functional microbial communities and environmental variables, such as temperature, dissolved oxygen, salinity, played important roles for connecting the seasonal variation of N. Among them, temperature was the trigger factor. High temperature in the summer induced the growth of functional microbes, which subsequently consumed a large portion of DIN inputted from the tributaries and reduced the N. The current study provided the relative importance of microbial communities and environmental variables in driving the DIN loss in the bay.

  18. Fractionated stereotactic radiotherapy in patients with benign or atypical intracranial meningioma: Long-term experience and prognostic factors

    SciTech Connect

    Milker-Zabel, Stefanie . E-mail: stefanie_milker-zabel@med.uni-heidelberg.de; Zabel, Angelika; Schulz-Ertner, Daniela; Schlegel, Wolfgang; Wannenmacher, Michael; Debus, Juergen

    2005-03-01

    Purpose: To analyze our long-term experience and prognostic factors after fractionated stereotactic radiotherapy (FSRT) in patients with benign or atypical intracranial meningioma. Methods and materials: Between January 1985 and December 2001, 317 patients with a median age of 55.7 years were treated with FSRT for intracranial meningioma. The tumor distribution was World Health Organization (WHO) Grade 1 in 48.3%, WHO Grade 2 in 8.2%, and unknown in 43.5%. Of the 317 patients, 97 underwent RT as their primary treatment, 79 underwent postoperative RT (subtotal resection in 38 and biopsy only in 41), and 141 were treated for recurrent disease. The median target volume was 33.6 cm{sup 3} (range, 1.0-412.6 cm{sup 3}). The median total dose was 57.6 Gy at 1.8 Gy/fraction five times weekly. Results: The median follow-up was 5.7 years (range, 1.2-14.3 years). The overall local tumor control rate was 93.1% (295 of 317). Of the 317 patients, 72 had a partial response on CT/MRI and 223 (70.4%) remained stable. At a median of 4.5 years after FSRT, 22 patients (6.9%) had local tumor progression on MRI. Local tumor failure was significantly greater in patients with WHO Grade 2 meningioma (p < 0.002) than in patients with WHO Grade 1 or unknown histologic features. Patients treated for recurrent meningioma showed a trend toward decreased progression-free survival compared with patients treated with primary therapy, after biopsy, or after subtotal resection (p < 0.06). Patients with a tumor volume >60 cm{sup 3} had a recurrence rate of 15.5% vs. 4.3% for those with a tumor volume of {<=}60 cm{sup 3} (p < 0.001). In 42.9% of the patients, preexisting neurologic deficits improved. Worsening of preexisting neurologic symptoms occurred in 8.2%. Eight patients developed new clinical symptoms, such as reduced vision, trigeminal neuralgia, and intermittent tinnitus located at the side of the irradiated meningioma after FSRT. Conclusion: These data have demonstrated that FSRT is an

  19. Risk factors for chronic undernutrition among children in India: Estimating relative importance, population attributable risk and fractions.

    PubMed

    Corsi, Daniel J; Mejía-Guevara, Iván; Subramanian, S V

    2016-05-01

    Nearly 40% of the world's stunted children live in India and the prevalence of undernutrition has been persistently high in recent decades. Given numerous available interventions for reducing undernutrition in children, it is not clear of the relative importance of each within a multifactorial framework. We assess the simultaneous contribution of 15 known risk factors for child chronic undernutrition in India. Data are from the 3rd Indian National Family Health Survey (NFHS-3), a nationally representative cross-sectional survey undertaken in 2005-2006. The study population consisted of children aged 6-59 months [n = 26,842 (stunting/low height-for-age), n = 27,483 (underweight/low weight-for-age)]. Risk factors examined for their association with undernutrition were: vitamin A supplementation, vaccination, use of iodized salt, household air quality, improved sanitary facilities, safe disposal of stools, improved drinking water, prevalence of infectious disease, initiation of breastfeeding, dietary diversity, age at marriage, maternal BMI, height, education, and household wealth. Age/sex-adjusted and multivariable adjusted effect sizes (odds ratios) were calculated for risk factors along with Population Attributable Risks (PAR) and Fractions (PAF) using logistic regression. In the mutually adjusted models, the five most important predictors of childhood stunting/underweight were short maternal stature, mother having no education, households in lowest wealth quintile, poor dietary diversity, and maternal underweight. These five factors had a combined PAR of 67.2% (95% CI: 63.3-70.7) and 69.7% (95% CI: 66.3-72.8) for stunting and underweight, respectively. The remaining factors were associated with a combined PAR of 11.7% (95% CI: 6.0-17.4) and 15.1% (95% CI: 8.9-21.3) for stunting and underweight, respectively. Implementing strategies focused on broader progress on social circumstances and infrastructural domains as well as investments in nutrition specific

  20. Risk factors for chronic undernutrition among children in India: Estimating relative importance, population attributable risk and fractions.

    PubMed

    Corsi, Daniel J; Mejía-Guevara, Iván; Subramanian, S V

    2016-05-01

    Nearly 40% of the world's stunted children live in India and the prevalence of undernutrition has been persistently high in recent decades. Given numerous available interventions for reducing undernutrition in children, it is not clear of the relative importance of each within a multifactorial framework. We assess the simultaneous contribution of 15 known risk factors for child chronic undernutrition in India. Data are from the 3rd Indian National Family Health Survey (NFHS-3), a nationally representative cross-sectional survey undertaken in 2005-2006. The study population consisted of children aged 6-59 months [n = 26,842 (stunting/low height-for-age), n = 27,483 (underweight/low weight-for-age)]. Risk factors examined for their association with undernutrition were: vitamin A supplementation, vaccination, use of iodized salt, household air quality, improved sanitary facilities, safe disposal of stools, improved drinking water, prevalence of infectious disease, initiation of breastfeeding, dietary diversity, age at marriage, maternal BMI, height, education, and household wealth. Age/sex-adjusted and multivariable adjusted effect sizes (odds ratios) were calculated for risk factors along with Population Attributable Risks (PAR) and Fractions (PAF) using logistic regression. In the mutually adjusted models, the five most important predictors of childhood stunting/underweight were short maternal stature, mother having no education, households in lowest wealth quintile, poor dietary diversity, and maternal underweight. These five factors had a combined PAR of 67.2% (95% CI: 63.3-70.7) and 69.7% (95% CI: 66.3-72.8) for stunting and underweight, respectively. The remaining factors were associated with a combined PAR of 11.7% (95% CI: 6.0-17.4) and 15.1% (95% CI: 8.9-21.3) for stunting and underweight, respectively. Implementing strategies focused on broader progress on social circumstances and infrastructural domains as well as investments in nutrition specific

  1. Stability of reef framework and post settlement mortality as the structuring factor for recovery of Malakal Bay Reef, Palau, Micronesia: 25 years after a severe COTS outbreak

    NASA Astrophysics Data System (ADS)

    Victor, Steven

    2008-03-01

    Corals in Malakal Bay reefs were devastated in the 1979 Crown of Thorns Starfish (COTS) outbreak. It has been almost 30 years since the outbreak and coral cover at the study sites have not come close to the cover before the outbreak. A question is asked: what factors may contribute to the slow recovery of these reefs: recruitment or post-settlement mortality? Two habitat types within the reef systems were monitored using coral transplants to determine if corals can survive in these environments and recruitment tiles to see if there are larvae coming into the system. The study revealed that coral survivorship is high in the fore reef areas compared to the reef channel slopes and that larvae is not a limiting factor to natural recovery. Stability of the reef framework, i.e. unstable rubble substrate, and possibly high post settlement mortality, are the structuring factors that determine the recovery process in these reef systems and possibly so for similar habitats in other reef systems throughout Palau.

  2. Tempered fractional calculus

    NASA Astrophysics Data System (ADS)

    Sabzikar, Farzad; Meerschaert, Mark M.; Chen, Jinghua

    2015-07-01

    Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered fractional difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series.

  3. Tempered fractional calculus

    SciTech Connect

    Sabzikar, Farzad; Meerschaert, Mark M.; Chen, Jinghua

    2015-07-15

    Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered fractional difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series.

  4. Mapping the Hydrogen Bond Networks in the Catalytic Subunit of Protein Kinase A Using H/D Fractionation Factors.

    PubMed

    Li, Geoffrey C; Srivastava, Atul K; Kim, Jonggul; Taylor, Susan S; Veglia, Gianluigi

    2015-07-01

    Protein kinase A is a prototypical phosphoryl transferase, sharing its catalytic core (PKA-C) with the entire kinase family. PKA-C substrate recognition, active site organization, and product release depend on the enzyme's conformational transitions from the open to the closed state, which regulate its allosteric cooperativity. Here, we used equilibrium nuclear magnetic resonance hydrogen/deuterium (H/D) fractionation factors (φ) to probe the changes in the strength of hydrogen bonds within the kinase upon binding the nucleotide and a pseudosubstrate peptide (PKI5-24). We found that the φ values decrease upon binding both ligands, suggesting that the overall hydrogen bond networks in both the small and large lobes of PKA-C become stronger. However, we observed several important exceptions, with residues displaying higher φ values upon ligand binding. Notably, the changes in φ values are not localized near the ligand binding pockets; rather, they are radiated throughout the entire enzyme. We conclude that, upon ligand and pseudosubstrate binding, the hydrogen bond networks undergo extensive reorganization, revealing that the open-to-closed transitions require global rearrangements of the internal forces that stabilize the enzyme's fold. PMID:26030372

  5. Experimental studies of alunite: I. 18O-16O and D-H fractionation factors between alunite and water at 250-450°C

    USGS Publications Warehouse

    Stoffregen, Roger E.; Rye, Robert O.; Wasserman, Michael D.

    1994-01-01

    We have determined oxygen and hydrogen isotope fractionation factors between alunite and water over a temperature range of 250-450??C by reacting synthetic natroalunite with 0.7 m K2SO4 -0.1 to 0.65 m H2SO4 solutions to produce K-rich alunite. From 88 to 95% alkali and isotope exchange were observed in most of these experiments, and the partial equilibrium method was used to compute equilibrium fractionation factors. Least-squares fits of the data give 103 In ??alunite(so4)-H2O = 3.09 ( 106 T2 (K)) - 2.94 and 103 In ??alunite(OH)-H2O = 2.28 ( 106 T2 (K)) - 3.90. The intramineral 18O- 16O fractionation factor 103 In ??alunite(so4-OH site) is given by the expression 0.8 ( 106 T2 (K)) + 0.96. The alunite-water D-H fractionation factor ranges from -19 at 450??C to -6 at 250??C and does not appear to be strongly dependent on temperature. Runs with alkali exchange in the opposite direction were used to obtain 18O- 16O and D-H fractionation factors between natroalunite (mol% Na = 70-75) and water at 350-450??C. These indicate that mol% Na has negligible effect on the fractionation factors over this temperature range. Measured 18O-16O and D-H fractionation factors between alunite and 1.0 m KCl -0.5 m H2SO4 fluids also agree within 2?? with the values obtained from the K2SO4-H2SO4 fluids. However, experiments with alunite and distilled water at 400??C gave a value of 103 In ??alunite(SO4)-H2O of 0.0, compared with a value of 3.9 obtained at this temperature with K2SO4- and H2SO4-bearing fluids. This suggests that changes in fluid composition can affect alunite-water 18O-16O fractionation factors. Reconnaissance experiments with fine-grained natural natroalunite demonstrate that alunite-water D-H exchange can occur by hydrogen diffusion, although this process is generally not significant in the experiments with coarser grained synthetic alunites. ?? 1994.

  6. Determination of the Fe(II)aq-magnetite equilibrium iron isotope fractionation factor using the three-isotope method and a multi-direction approach to equilibrium

    NASA Astrophysics Data System (ADS)

    Frierdich, Andrew J.; Beard, Brian L.; Scherer, Michelle M.; Johnson, Clark M.

    2014-04-01

    Magnetite is ubiquitous in the Earth's crust and its presence in modern marine sediments has been taken as an indicator of biogeochemical Fe cycling. Magnetite is also the most abundant Fe oxide in banded iron formations (BIFs) that have not been subjected to ore-forming alteration. Magnetite is therefore an important target of stable Fe isotope studies, and yet interpretations are currently difficult because of large uncertainties in the equilibrium stable Fe isotope fractionation factors for magnetite relative to fluids and other minerals. In this study, we utilized the three-isotope method (57Fe-56Fe-54Fe) to explore isotopic exchange via an enriched-57Fe tracer, and natural mass-dependent fractionation using 56Fe/54Fe variations, during reaction of aqueous Fe(II) (Fe(II)aq) with magnetite. Importantly, we employed a multi-direction approach to equilibrium by reacting four 57Fe-enriched Fe(II) solutions that had distinct 56Fe/54Fe ratios, which identifies changes in the instantaneous Fe isotope fractionation factor and hence identifies kinetic isotope effects. We find that isotopic exchange can be described by two 56Fe/54Fe fractionations, where an initial rapid exchange (∼66% isotopic mixing within 1 day) involved a relatively small Fe(II)aq-magnetite 56Fe/54Fe fractionation, followed by slower exchange (∼25% isotopic mixing over 50 days) that was associated with a larger Fe(II)aq-magnetite 56Fe/54Fe fractionation; this later fractionation is interpreted to approach isotopic equilibrium between Fe(II)aq and the total magnetite. All four Fe(II) solutions extrapolate to the same final equilibrium 56Fe/54Fe fractionation for Fe(II)aq-magnetite of -1.56±0.20‰ (2σ) at 22 °C. Additional experiments that synthesized magnetite via conversion of ferrihydrite by reaction with aqueous Fe(II) yield final 56Fe/54Fe fractionations that are identical to those of the exchange experiments. Our experimental results agree well with calculated fractionation factors using

  7. [Effects of environmental factors on β diversity of zooplankton community in thermal discharge seawaters near Guohua Power Plant in Xiangshan Bay, Zhejiang, China].

    PubMed

    Zhu, Yi-feng; Dai, Mei-xia; Zhou, Xiao-hong; Lin, Xia; Mao, Shuo-qian; Yan, Xiao-jun

    2015-08-01

    Zooplankton samples were seasonally collected at 10 stations in thermal discharge seawaters near Guohua Power Plant in Xiangshan Bay. The abundance data from these samples were pooled and further combined with field environmental factors, then generalised dissimilarity modelling (GDM) was used to explore the effects of environmental factors on β diversity of zooplankton community. The results showed that altogether 95 species of zooplankton belonging to 14 taxa were found. In these taxa, small zooplankton with 62.6% of abundance was the main taxa, while copepods dominated in adult groups, which abundance accounted for 35.3%. According to Whittaker's definition and additive partition, a diversity accounted for 36.3% and β diversity 63.7%. Environmental factors explained 43.8% of β diversity, and geographical distance between sampling sites had no effect on β diversity. However, there were still 19.9% of β diversity remained to be explained. After GDM fitting, there were nine environmental variables affecting zooplankton β diversity and explaining 68.8% of β diversity. The variables contributing to β diversity from high to low were seasonal water temperature, dissolved oxygen, seawater temperature increment, conductivity, suspended particulate matter, salinity, transparency, water depth and redox potential, respectively. Seasonal water temperature, dissolved oxygen and seawater temperature increment were the most important factors for driving β diversity changes, and accounted for 23.9%, 13.7% and 9.7% of absolute contribution to the interpretable portion of the β diversity, respectively. When seasonal water temperature, dissolved oxygen and seawater temperature increment were below 25 °C, greater than 5 mg · L(-1) and over 1 °C, respectively, β diversity rapidly increased with the increasing variable gradients. Furthermore, other predictors had little effect on β diversity. PMID:26685620

  8. TEMPERED FRACTIONAL CALCULUS

    PubMed Central

    MEERSCHAERT, MARK M.; SABZIKAR, FARZAD; CHEN, JINGHUA

    2014-01-01

    Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series. PMID:26085690

  9. Weak acid extractable metals in Bramble Bay, Queensland, Australia: temporal behaviour, enrichment and source apportionment.

    PubMed

    Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

    2015-02-15

    Sediment samples were taken from six sampling sites in Bramble Bay, Queensland, Australia between February and November in 2012. They were analysed for a range of heavy metals including Al, Fe, Mn, Ti, Ce, Th, U, V, Cr, Co, Ni, Cu, Zn, As, Cd, Sb, Te, Hg, Tl and Pb. Fraction analysis, Enrichment Factors and Principal Component Analysis-Absolute Principal Component Scores (PCA-APCS) were carried out in order to assess metal pollution, potential bioavailability and source apportionment. Cr and Ni exceeded the Australian Interim Sediment Quality Guidelines at some sampling sites, while Hg was found to be the most enriched metal. Fraction analysis identified increased weak acid soluble Hg and Cd during the sampling period. Source apportionment via PCA-APCS found four sources of metals pollution, namely, marine sediments, shipping, antifouling coatings and a mixed source. These sources need to be considered in any metal pollution control measure within Bramble Bay.

  10. Weak acid extractable metals in Bramble Bay, Queensland, Australia: temporal behaviour, enrichment and source apportionment.

    PubMed

    Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

    2015-02-15

    Sediment samples were taken from six sampling sites in Bramble Bay, Queensland, Australia between February and November in 2012. They were analysed for a range of heavy metals including Al, Fe, Mn, Ti, Ce, Th, U, V, Cr, Co, Ni, Cu, Zn, As, Cd, Sb, Te, Hg, Tl and Pb. Fraction analysis, Enrichment Factors and Principal Component Analysis-Absolute Principal Component Scores (PCA-APCS) were carried out in order to assess metal pollution, potential bioavailability and source apportionment. Cr and Ni exceeded the Australian Interim Sediment Quality Guidelines at some sampling sites, while Hg was found to be the most enriched metal. Fraction analysis identified increased weak acid soluble Hg and Cd during the sampling period. Source apportionment via PCA-APCS found four sources of metals pollution, namely, marine sediments, shipping, antifouling coatings and a mixed source. These sources need to be considered in any metal pollution control measure within Bramble Bay. PMID:25537749

  11. Tumor necrosis factor-α suppresses the protein fractional synthesis rate of the small intestine stimulated by glutamine in rats

    PubMed Central

    ZHOU, JIHONG; FAN, SHENGXIAN; CAO, YACHENG; ZHU, MINGFANG; HAN, YONG; CAO, XUEYING; LI, YOUSHENG

    2015-01-01

    The objective of this study was to examine whether and how TNF-α affects glutamine-enhanced protein synthesis and the expression of the amino acid transporter ASCT2 in the small intestine at the mRNA and protein levels. A total of 30 male Sprague-Dawley rats were randomly assigned into three groups, namely the total parenteral nutrition (TPN; control), glutamine-treated (Gln), and glutamine- and tumor necrosis factor-α (TNF-α)-treated (TNF-α) groups. At 30 min prior to examination, all rats were mainlined with [L-15N]leucine. The concentration of TNF-α in plasma and of glutamine in plasma and the small intestine was measured. The fractional synthesis rate (FSR) of protein and the mRNA and protein expression levels of ASCT2 in the small intestine were assessed. The level of TNF-α was highest in the TNF-α group and the glutamine concentration was elevated to a greater extent in the TNF-α group than in the other two groups. However, the FSR of protein in the small intestine was significantly higher in the Gln group compared with that in the TNF-α group. The mRNA and protein expression levels of ASCT2 in the experimental groups were significantly higher that those in the control group, but did not differ significantly between the Gln and TNF-α groups. These results indicate that TNF-α may attenuate glutamine-stimulated protein synthesis in the small intestine in the early stage of sepsis in rats. The mechanism may be that TNF-α inhibits the function of the glutamine transporter in the uptake the glutamine into target cells for protein synthesis. This inhibition may occur at or following protein translation. PMID:25574232

  12. [Impact of coastal exploitation on the heavy metal contents in the sediment of Bohai Bay].

    PubMed

    Qin, Yan-Wen; Zheng, Bing-Hui; Li, Xiao-Bao; Zhang, Lei; Shi, Yao; Cao, Wei

    2012-07-01

    To explore the trend of the changes in ecological environment caused by reclamation and the situation of heavy metal pollution in Bohai Bay, the contents and spatial distribution of Cd, Pb, Cu and Zn in the surface sediments of Bohai Bay were collected in 2003 and 2011 and studied. The BCR three-stage sequential extraction procedure was applied to investigate the speciation and contents of four heavy metals (Cd, Pb, Cu and Zn) in the surface sediments of Bohai Bay in 2011. The bioavailability of these four heavy metals was also determined preliminarily. Besides, the pollution level and potential ecological risk of these elements were evaluated using the potential ecological risk index and sediment enrichment factors. The results indicated that the contents of Cu, Cd and Pb in the surface sediments of Bohai Bay in 2011 were higher than those in 2003, indicating an increased level of heavy metal pollution. The distribution of Cu, Zn and Cd showed essentially the same pattern, all with higher content in the central area of Bohai Bay. High content of Pb was found in the estuarine, the central and southern area of Bohai Bay. There were significant positive correlations among these four elements. The results indicated that these four elements probably had the same pollution source. Cu, Zn and Cd were mainly found in the residual fractions, whereas Pb was mainly found in the reducible fractions. The bioavailability of these four metals is listed here in descending order: Cd > Pb > Cu > Zn. The comprehensive assessment results showed that Cd was the primary element with high ecological risk while Cu, Zn, Pb were the minor ones with relatively low risk.

  13. Underground water in Sukhodol Bay area (South Primorye)

    NASA Astrophysics Data System (ADS)

    Chelnokov, G.; Yu, Kolubaeva

    2016-03-01

    The paper describes the specific chemical groundwater composition in Sukhodol Bay (eastern Ussuri Bay). The equilibrium between groundwater and carbonate-aluminosilicate minerals in water-bearing rocks was calculated. It was established that a fraction of the studied water was calcite saturated. However, dolomite and magnesium undersaturated groundwater is non-equilibrium with primary aluminosilicates.

  14. Diagnostic, treatment, and demographic factors influencing survival in a population-based study of adult glioma patients in the San Francisco Bay Area.

    PubMed

    Wrensch, Margaret; Rice, Terri; Miike, Rei; McMillan, Alex; Lamborn, Kathleen R; Aldape, Kenneth; Prados, Michael D

    2006-01-01

    We compare survival estimates for population-based glioma cases by using two diagnostic coding schemes, (1) the International Classification of Diseases, Oncology, second edition (ICD-O-2) as reported by the Surveillance, Epidemiology, and End Results (SEER) program and (2) central neuropathology review diagnosis based on the World Health Organization II classification. In addition, among review categories, we estimate survival in relation to several patient demographic and treatment factors. Eligible cases included adults residing in the San Francisco Bay SEER Area with newly diagnosed, histologically confirmed glioma during the years 1991-1994 and 1997-1999. The study group included participating subjects for whom subsequent central neuropathology review confirmed glioma. We determined treatments, vital status, and other factors by using registry, interview, medical record, and active follow-up data. Survival differences between anaplastic astrocytoma (AA) and astrocytoma were apparent from review diagnoses (median months of survival for AA, 13.0 [95% CI, 9.9-19.5], and astrocytoma, 101.3 [95% CI lower limit, 42.1; upper limit not yet reached]), but not with ICD-O-2 diagnoses reported by SEER (median months of survival for AA, 16.6 [95% CI, 12.0-20.7], and astrocytoma, not otherwise specified, 17.2 [95% CI, 10.6-71.6]). This finding emphasizes the need for improvements in coding for nonglioblastoma astrocytomas to provide better population survival estimates. When review diagnosis was used, younger age and resection (vs. biopsy) were statistically significant for all histology groups analyzed by multivariable Cox proportional hazard models. Additional statistically significant variables were as follows: among 517 glioblastoma patients, radiation treatment and being married; among 105 AA patients, inclusion of chemotherapy in the initial treatment; and among 106 patients with nonanaplastic oligodendroglial tumors, college education. Further consideration of impact

  15. Diagnostic, treatment, and demographic factors influencing survival in a population-based study of adult glioma patients in the San Francisco Bay Area1

    PubMed Central

    Wrensch, Margaret; Rice, Terri; Miike, Rei; McMillan, Alex; Lamborn, Kathleen R.; Aldape, Kenneth; Prados, Michael D.

    2006-01-01

    We compare survival estimates for population-based glioma cases by using two diagnostic coding schemes, (1) the International Classification of Diseases, Oncology, second edition (ICD-O-2) as reported by the Surveillance, Epidemiology, and End Results (SEER) program and (2) central neuropathology review diagnosis based on the World Health Organization II classification. In addition, among review categories, we estimate survival in relation to several patient demographic and treatment factors. Eligible cases included adults residing in the San Francisco Bay SEER Area with newly diagnosed, histologically confirmed glioma during the years 1991–1994 and 1997–1999. The study group included participating subjects for whom subsequent central neuropathology review confirmed glioma. We determined treatments, vital status, and other factors by using registry, interview, medical record, and active follow-up data. Survival differences between anaplastic astrocytoma (AA) and astrocytoma were apparent from review diagnoses (median months of survival for AA, 13.0 [95% CI, 9.9–19.5], and astrocytoma, 101.3 [95% CI lower limit, 42.1; upper limit not yet reached]), but not with ICD-O-2 diagnoses reported by SEER (median months of survival for AA, 16.6 [95% CI, 12.0–20.7], and astrocytoma, not otherwise specified, 17.2 [95% CI, 10.6–71.6]). This finding emphasizes the need for improvements in coding for nonglioblastoma astrocytomas to provide better population survival estimates. When review diagnosis was used, younger age and resection (vs. biopsy) were statistically significant for all histology groups analyzed by multivariable Cox proportional hazard models. Additional statistically significant variables were as follows: among 517 glioblastoma patients, radiation treatment and being married; among 105 AA patients, inclusion of chemotherapy in the initial treatment; and among 106 patients with nonanaplastic oligodendroglial tumors, college education. Further consideration

  16. Occurrence of organochlorine compounds in Euphausia superba and unhatched eggs of Pygoscelis genus penguins from Admiralty Bay (King George Island, Antarctica) and estimation of biomagnification factors.

    PubMed

    Cipro, Caio V Z; Taniguchi, Satie; Montone, Rosalinda Carmela

    2010-02-01

    Polychlorinated biphenyls (PCBs) and organochlorine pesticides are compounds that do not occur naturally in the environment and are not easily degraded by chemical or microbiological action. In the present work, those compounds were analysed in unhatched penguin eggs and whole krill collected in Admiralty Bay, King George Island, Antarctica in the austral summers of 2004-2005 and 2005-2006. The compounds found in higher levels (in a wet weight basis) were, in most of the egg samples, the PCBs (2.53-78.7 ng g(-1)), DDTs (2.07-38.0 ng g(-1)) and HCB (4.99-39.1 ng g(-1)) and after Kruskal-Wallis ANOVA, the occurrence seemed to be species-specific for the Pygoscelis genus. In all of the cases, the levels found were not higher than the ones in Arctic birds in a similar trophic level. The krill samples analysis allowed estimating the biomagnification factors (which resulted in up to 363 for HCB, one order of magnitude higher than DDTs and chlordanes and two orders of magnitude higher than the other groups) of the compounds found in eggs, whose only source of contamination is the female-offspring transfer.

  17. Environmental factors associated with long-term changes in chlorophyll concentration in the Sacramento-San Joaquin delta and Suisun Bay, California

    SciTech Connect

    Lehman, P.W. )

    1992-09-01

    Long-term changes in chlorophyll concentration were predicted from environmental variables using Box-Jenkins transfer function models for the Sacramento and San Joaquin rivers and Suisun Bay. The indication that oceanic phytoplankton biomass for the California regions is associated with climatic phenomena produced by El Nino and the Southern Oscillation (ENSO) was one of several factors used to standardize the dataset. Data used for the analyses were collected continuously on a semimonthly or monthly basis over the 17-yr period between 1971 and 1987. Groups of highly correlated environmental variables were summarized along three environmental axes using principal component analysis. The first environmental axis summarized river flow and specific conductance. The second environmental axis summarized water transparency and the third environmental axis summarized air and water temperature. Chlorophyll concentration was significantly cross-correlated with environmental axes and individual environmental variables. Transfer function models developed to describe changes in chlorophyll concentration over time were characterized by lag responses and described between 41% and 51% of the data variation. Significant cross-correlations between environmental axes and the California climate index (CA SLP) were used to develop a conceptual model of the link between regional climate and estuarine production. 50 refs., 5 figs.

  18. Occurrence of organochlorine compounds in Euphausia superba and unhatched eggs of Pygoscelis genus penguins from Admiralty Bay (King George Island, Antarctica) and estimation of biomagnification factors.

    PubMed

    Cipro, Caio V Z; Taniguchi, Satie; Montone, Rosalinda Carmela

    2010-02-01

    Polychlorinated biphenyls (PCBs) and organochlorine pesticides are compounds that do not occur naturally in the environment and are not easily degraded by chemical or microbiological action. In the present work, those compounds were analysed in unhatched penguin eggs and whole krill collected in Admiralty Bay, King George Island, Antarctica in the austral summers of 2004-2005 and 2005-2006. The compounds found in higher levels (in a wet weight basis) were, in most of the egg samples, the PCBs (2.53-78.7 ng g(-1)), DDTs (2.07-38.0 ng g(-1)) and HCB (4.99-39.1 ng g(-1)) and after Kruskal-Wallis ANOVA, the occurrence seemed to be species-specific for the Pygoscelis genus. In all of the cases, the levels found were not higher than the ones in Arctic birds in a similar trophic level. The krill samples analysis allowed estimating the biomagnification factors (which resulted in up to 363 for HCB, one order of magnitude higher than DDTs and chlordanes and two orders of magnitude higher than the other groups) of the compounds found in eggs, whose only source of contamination is the female-offspring transfer. PMID:19917513

  19. Non-O1/non-O139 Vibrio cholerae carrying multiple virulence factors and V. cholerae O1 in the Chesapeake Bay, Maryland.

    PubMed

    Ceccarelli, Daniela; Chen, Arlene; Hasan, Nur A; Rashed, Shah M; Huq, Anwar; Colwell, Rita R

    2015-03-01

    Non-O1/non-O139 Vibrio cholerae inhabits estuarine and coastal waters globally, but its clinical significance has not been sufficiently investigated, despite the fact that it has been associated with septicemia and gastroenteritis. The emergence of virulent non-O1/non-O139 V. cholerae is consistent with the recognition of new pathogenic variants worldwide. Oyster, sediment, and water samples were collected during a vibrio surveillance program carried out from 2009 to 2012 in the Chesapeake Bay, Maryland. V. cholerae O1 was detected by a direct fluorescent-antibody (DFA) assay but was not successfully cultured, whereas 395 isolates of non-O1/non-O139 V. cholerae were confirmed by multiplex PCR and serology. Only a few of the non-O1/non-O139 V. cholerae isolates were resistant to ampicillin and/or penicillin. Most of the isolates were sensitive to all antibiotics tested, and 77 to 90% carried the El Tor variant hemolysin gene hlyAET, the actin cross-linking repeats in toxin gene rtxA, the hemagglutinin protease gene hap, and the type 6 secretion system. About 19 to 21% of the isolates carried the neuraminidase-encoding gene nanH and/or the heat-stable toxin (NAG-ST), and only 5% contained a type 3 secretion system. None of the non-O1/non-O139 V. cholerae isolates contained Vibrio pathogenicity island-associated genes. However, ctxA, ace, or zot was present in nine isolates. Fifty-five different genotypes showed up to 12 virulence factors, independent of the source of isolation, and represent the first report of both antibiotic susceptibility and virulence associated with non-O1/non-O139 V. cholerae from the Chesapeake Bay. Since these results confirm the presence of potentially pathogenic non-O1/non-O139 V. cholerae, monitoring for total V. cholerae, regardless of serotype, should be done within the context of public health. PMID:25556194

  20. Non-O1/non-O139 Vibrio cholerae carrying multiple virulence factors and V. cholerae O1 in the Chesapeake Bay, Maryland.

    PubMed

    Ceccarelli, Daniela; Chen, Arlene; Hasan, Nur A; Rashed, Shah M; Huq, Anwar; Colwell, Rita R

    2015-03-01

    Non-O1/non-O139 Vibrio cholerae inhabits estuarine and coastal waters globally, but its clinical significance has not been sufficiently investigated, despite the fact that it has been associated with septicemia and gastroenteritis. The emergence of virulent non-O1/non-O139 V. cholerae is consistent with the recognition of new pathogenic variants worldwide. Oyster, sediment, and water samples were collected during a vibrio surveillance program carried out from 2009 to 2012 in the Chesapeake Bay, Maryland. V. cholerae O1 was detected by a direct fluorescent-antibody (DFA) assay but was not successfully cultured, whereas 395 isolates of non-O1/non-O139 V. cholerae were confirmed by multiplex PCR and serology. Only a few of the non-O1/non-O139 V. cholerae isolates were resistant to ampicillin and/or penicillin. Most of the isolates were sensitive to all antibiotics tested, and 77 to 90% carried the El Tor variant hemolysin gene hlyAET, the actin cross-linking repeats in toxin gene rtxA, the hemagglutinin protease gene hap, and the type 6 secretion system. About 19 to 21% of the isolates carried the neuraminidase-encoding gene nanH and/or the heat-stable toxin (NAG-ST), and only 5% contained a type 3 secretion system. None of the non-O1/non-O139 V. cholerae isolates contained Vibrio pathogenicity island-associated genes. However, ctxA, ace, or zot was present in nine isolates. Fifty-five different genotypes showed up to 12 virulence factors, independent of the source of isolation, and represent the first report of both antibiotic susceptibility and virulence associated with non-O1/non-O139 V. cholerae from the Chesapeake Bay. Since these results confirm the presence of potentially pathogenic non-O1/non-O139 V. cholerae, monitoring for total V. cholerae, regardless of serotype, should be done within the context of public health.

  1. Modification of the volumetric growth responses and steady-state hypoxic fractions of xenografted DLD-2 human colon carcinomas by administration of basic fibroblast growth factor or suramin.

    PubMed Central

    Leith, J. T.; Papa, G.; Quaranto, L.; Michelson, S.

    1992-01-01

    We studied the growth characteristics and hypoxic fractions of DLD-2 human colon tumours xenografted into male nude mice either in the unperturbed state or after i.p. injection (q.i.d. x 7) of basic fibroblast growth factor (0.25 mg kg-1) or suramin (50 mg kg-1). Hypoxic fractions were measured by clonogenic excision assay 1 day after administration b FGF or suramin was stopped. As compared to controls, the growth of tumours in b FGF treated mice was increased by a factor of 1.5 as indicated by the relative volumes of tumours on the day of excision. Similarly, suramin decreased the growth of DLD-2 tumours by a factor of 1.6. The percentage of hypoxic cells in control neoplasms was 42.9% (95% confidence limits 34.2-52.1%). In mice that received basic fibroblast growth factor injections, hypoxic fractions decreased to 19.1% (95% confidence limits 13.5-26.9%). In contrast, in mice treated with suramin, the percentage of hypoxic cells increased to 74.0% (95% confidence limits 65.3-83.9%). These data indicate that the biology of solid tumours can be significantly modified by alteration of growth factor status. PMID:1503909

  2. PCDD/F, PCB, HXCBZ, PAH, AND PM EMISSION FACTORS FOR FIREPLACE AND WOODSTOVE COMBUSTION IN THE SAN FRANCISCO BAY REGION

    EPA Science Inventory

    Emissions from residential fireplace and woodstove appliances burning fuels available from the San Francisco Bay area were sampled for polychlornated dibenzodioxins and dibenzofurans (PCDDs/Fs), polychlorinated biphenyls (PCBs), hexachlorobenzene (HxCBz), particulate
    matter (P...

  3. Controlling factors of Ca isotope fractionation in scleractinian corals evaluated by temperature, pH and light controlled culture experiments

    NASA Astrophysics Data System (ADS)

    Inoue, Mayuri; Gussone, Nikolaus; Koga, Yasuko; Iwase, Akihiro; Suzuki, Atsushi; Sakai, Kazuhiko; Kawahata, Hodaka

    2015-10-01

    In this study, the 44Ca/40Ca ratios of Porites australiensis grown under three different culture experiments composed of temperature, pH and light controlled culture experiments are measured. The temperature dependent isotope fractionation of 0.02‰/°C deduced from this study is similar to inorganic aragonite, but the degree of isotope fractionation is about +0.4‰ offset in corals. These observations agree with earlier results on different coral species, suggesting Ca isotope fractionation during Ca transmembrane transport in corals. While in cultured corals a significant temperature dependence of δ44Ca is observed, the relationships between calcium isotope fractionation and pH as well as light intensity are negligible. Therefore variation of δ44Ca in Porites corals is mainly controlled by temperature. A combination of δ44Ca and Sr/Ca of corals in temperature controlled experiments cannot be explained by Rayleigh type fractionation directly from a fluid, which is seawater-like in terms of δ44Ca and Sr/Ca. Through coral-specific biomineralization processes, overall mean δ44Ca of scleractinian corals including previous studies are different from biogenic aragonites secreted by sclerosponges and pteropods, but are comparable with those of bivalves as well as calcitic coccolithophores and foraminifers. These findings are important for better understanding biomineralization in corals and in order to constrain the Ca isotopic composition of oceanic Ca sinks in response to climate changes and associated with shifts of calcite and aragonite seas.

  4. Biochemical assessment of growth factors and circulation of blood components contained in the different fractions obtained by centrifugation of venous blood.

    PubMed

    Corigiano, M; Ciobanu, G; Baldoni, E; Pompa, G

    2014-01-01

    The aim of this study was to evaluate a biochemical marker with different elements of a normal blood serum and centrifuged blood serum after a different rotation system. For this technique, we used five fractions of a blood Concentrated Growth Factors system (bCGF) and a particular device for the different rotation program. Blood samples were collected from 10 volunteers aged between 35 and 55 in the Operative Unit of the “Sapienza” University of Rome with only a fraction of different biochemical elements. Through an individual blood phase separator tube of venous blood, active factions of serum and 4 fractions of red buffy coat were taken. The biochemical markers with 14 elements were examined at times: P1-11 minutes, P2-12minutes, P3-15 minutes. Exclusively biological materials which are normally applied in the regeneration techniques for different defects and lesions were used with this technique. After specific rotation programs, a different result was obtained for each cycle: P1, P2, P3. In test tubes obtained by separated blood, we observed a higher concentration of proteins, ions, and other antigens compared to normal blood plasma. Examining the biochemical results of different elements, we observed an increase (P≤0,01). Since each person’s DNA is different, we could not have the same results in 5 fractions of blood concentration, we did, however, find a good increase in only a fraction of proteins, immunoglobulin and different ions. We obtained five fractions after centrifugation, and we had an increase in different biochemical elements compared to normal blood (P≤0,01) which is significant at different times. These biochemical elements were stimulated by different growth factors, which are used by the immune system, and they induced the formation of hard and soft tissues and good regeneration.

  5. Towards A Modern Calibration Of The 238U/235U Paleoredox Proxy: Apparent Uranium Isotope Fractionation Factor During U(VI)-U(IV) Reduction In The Black Sea

    NASA Astrophysics Data System (ADS)

    Rolison, J. M.; Stirling, C. H.; Middag, R.; Rijkenberg, M. J. A.; De Baar, H. J. W.

    2015-12-01

    The isotopic compositions of redox-sensitive metals, including uranium (U), in marine sediments have recently emerged as powerful diagnostic tracers of the redox state of the ancient ocean-atmosphere system. Interpretation of sedimentary isotopic information requires a thorough understating of the environmental controls on isotopic fractionation in modern anoxic environments before being applied to the paleo-record. In this study, the relationship between ocean anoxia and the isotopic fractionation of U was investigated in the water column and sediments of the Black Sea. The Black Sea is the world's largest anoxic basin and significant removal of U from the water column and high U accumulation rates in modern underlying sediments have been documented. Removal of U from the water column occurs during the redox transition of soluble U(VI) to relatively insoluble U(IV). The primary results of this study are two-fold. First, significant 238U/235U fractionation was observed in the water column of the Black Sea, suggesting the reduction of U induces 238U/235U fractionation with the preferential removal of 238U from the aqueous phase. Second, the 238U/235U of underlying sediments is related to the water column through the isotope fractionation factor of the reduction reaction but is influenced by mass transport processes. These results provide important constraints on the use of 238U/235U as a proxy of the redox state of ancient oceans.

  6. Estimation of EEC, unattached fraction and equilibrium factor for the assessment of radiological dose using pin-hole cup dosimeters and deposition based progeny sensors.

    PubMed

    Bangotra, Pargin; Mehra, Rohit; Kaur, Kirandeep; Kanse, Sandeep; Mishra, Rosaline; Sahoo, B K

    2015-10-01

    High concentration of radon ((222)Rn), thoron ((220)Rn) and their decay products in environment may increase the risk of radiological exposure to the mankind. The (222)Rn, (220)Rn concentration and their separate attached and unattached progeny concentration in units of EEC have been measured in the dwellings of Muktsar and Mansa districts of Punjab (India), using Pin-hole cup dosimeters and deposition based progeny sensors (DTPS/DRPS). The indoor (222)Rn and (220)Rn concentration was found to vary from 21 Bqm(-3) to 94 Bqm(-3) and 17 Bqm(-3) to 125 Bqm(-3). The average EEC (attached + unattached) of (222)Rn and (220)Rn was 25 Bqm(-3) and 1.8 Bqm(-3). The equilibrium factor for (222)Rn and (220)Rn in studied area was 0.47 ± 0.13 and 0.05 ± 0.03. The equilibrium factor and unattached fraction of (222)Rn and (220)Rn has been calculated separately. Dose conversion factors (DCFs) of different models have been calculated from unattached fraction for the estimation of annual effective dose in the studied area. From the experimental data a correlation relationship has been observed between unattached fraction (f(p)(Rn)) and equilibrium factor (F(Rn)). The present work also aims to evaluate an accurate expression among available expression in literature for the estimation of f(p)(Rn). PMID:26117280

  7. In vivo isotope-fractionation factors and the measurement of deuterium- and oxygen-18-dilution spaces from plasma, urine, saliva, respiratory water vapor, and carbon dioxide

    SciTech Connect

    Wong, W.W.; Cochran, W.J.; Klish, W.J.; Smith, E.O.; Lee, L.S.; Klein, P.D.

    1988-01-01

    In vivo isotope-fractionation factors were determined for hydrogen and oxygen between plasma water samples and samples of urine, saliva, respiratory water vapor, and carbon dioxide in 20 normal adults. The isotope-fractionation factors ranged from 0.944 to 1.039 for /sup 2/H in breath water vapor and for /sup 18/O in breath CO/sub 2/, respectively. When corrected for isotope fractionation, the /sup 2/H- and /sup 18/O-dilution spaces determined from urine, saliva, respiratory water, and CO/sub 2/ were within -0.10 +/- 1.09 kg (mean +/- SD, n = 60) and 0.04 +/- 0.68 kg (n = 80), respectively, of the values determined from plasma. In the absence of these corrections, we observed a 6% overestimation of /sup 2/H-dilution space and a 1% overestimation of /sup 18/O-dilution space from the use of respiratory water values. A 4% underestimation of the /sup 18/O-dilution space was observed for breath CO/sub 2/ without correction for isotope fractionation.

  8. Gradient Analysis and Classification of Carolina Bay Vegetation: A Framework for Bay Wetlands Conservation and Restoration

    SciTech Connect

    Diane De Steven,Ph.D.; Maureen Tone,PhD.

    1997-10-01

    This report address four project objectives: (1) Gradient model of Carolina bay vegetation on the SRS--The authors use ordination analyses to identify environmental and landscape factors that are correlated with vegetation composition. Significant factors can provide a framework for site-based conservation of existing diversity, and they may also be useful site predictors for potential vegetation in bay restorations. (2) Regional analysis of Carolina bay vegetation diversity--They expand the ordination analyses to assess the degree to which SRS bays encompass the range of vegetation diversity found in the regional landscape of South Carolina's western Upper Coastal Plain. Such comparisons can indicate floristic status relative to regional potentials and identify missing species or community elements that might be re-introduced or restored. (3) Classification of vegetation communities in Upper Coastal Plain bays--They use cluster analysis to identify plant community-types at the regional scale, and explore how this classification may be functional with respect to significant environmental and landscape factors. An environmentally-based classification at the whole-bay level can provide a system of templates for managing bays as individual units and for restoring bays to desired plant communities. (4) Qualitative model for bay vegetation dynamics--They analyze present-day vegetation in relation to historic land uses and disturbances. The distinctive history of SRS bays provides the possibility of assessing pathways of post-disturbance succession. They attempt to develop a coarse-scale model of vegetation shifts in response to changing site factors; such qualitative models can provide a basis for suggesting management interventions that may be needed to maintain desired vegetation in protected or restored bays.

  9. Chronic sublethal effects of San Francisco Bay sediments on Nereis (neanthes) arenaceodentata: Non treatment factors. Final report

    SciTech Connect

    Moore, D.W.; Dillon, T.M.

    1992-09-01

    Initial development of a chronic sublethal sediment bioassay with the polychaete Nereis (Neanthes) arenaceodentata is described. The test was initiated with 2 to 3-week-old postemergent juvenile worms and terminated after 21 days. The sublethal test end point was estimated individual somatic growth rate (milligrams dry weight/day). The potential bias due to selected nontreatment factors on polychaete survival and growth was evaluated. For example, grain size had no effect, while the number of worms added to each exposure vessel was critical. Direct transfer from 30 ppt to salinities < or = ppt had a highly significant and adverse effect on survival and growth. Both survival and growth of juvenile worms may be adversely affected if test conditions involve exposures to > or = mg/L ammonia or > or = mg/L hydrogen sulfide.... Chronic, Growth, Neanthes, Sediment, Sublethal.

  10. The iron isotope composition of enstatite meteorites: Implications for their origin and the metal/sulfide Fe isotopic fractionation factor

    NASA Astrophysics Data System (ADS)

    Wang, Kun; Savage, Paul S.; Moynier, Frédéric

    2014-10-01

    due to intensive impact-induced shearing stress, or the ultimate destruction of the Shallowater parent body. Analysis of separated enstatite meteorite mineral phases show that the magnetic phase (Fe metal) is systematically enriched in the heavier Fe isotopes when compared to non-magnetic phases (Fe hosted in troilite), which agrees with previous experimental observations and theoretical calculations. The difference between magnetic and non-magnetic phases from enstatite achondrites provides an equilibrium metal-sulfide Fe isotopic fractionation factor of Δ56Femetal-troilite = δ56Femetal - δ56Fetroilite of 0.129 ± 0.060‰ (2 SE) at 1060 ± 80 K, which confirms the predictions of previous theoretical calculations.

  11. Factors influencing the distribution of 223Ra and 224Ra in the coastal waters off Tanggu and Qikou in Bohai bay

    NASA Astrophysics Data System (ADS)

    Tang, Guoqiang; Yi, Lixin; Liu, Lingling; Cheng, Xiaoqing

    2015-10-01

    The naturally occurring 223Ra and 224Ra isotopes have become an established tool for investigating water mixing and submarine groundwater discharge (SGD). In this paper, we used the radium delayed coincidence counter (RaDeCC) to measure 223Ra and 224Ra activities, the distributions of 223Ra and 224Ra in two coastal waters with different hydrographical conditions and its influence factors were explored in Bohai bay. The results indicated that the Ra concentration was constrained by coastal land use patterns, the type of water and the geochemical environment. The Ra concentrations in groundwater and beach water were generally higher than the Ra concentrations in offshore waters. In the highly urbanized and industrialized Tanggu area, both of 223Ra in coastal water (average 3.74 dpm/100 L) and 224Ra (average 41.3 dpm/100 L) were lower than that in the undeveloped Qikou area (average 9.65 dpm/100 L and 148.9 dpm/100 L for 223Ra and 224Ra, respectively). Urbanization and Marine reclamations have modified local hydrogeological conditions, and then reduced SGD fluxes. Human activities have poured much more contaminants into coastal oceans and changed local aqueous environments, thus resulted all chemical compositions were richer in the urbanized coastal waters. With respect to the relationships between radium and the chemical compositions of the waters, radium was negatively related to salinity, nitrate and sulfate but was positively related to the concentration of cations such as calcium and magnesium. The apparent residence ages and SGD fluxes were also estimated from the radium distributions. There were more SGD fluxes into the coastal water off Qikou (9.88×107 m3/d) than into the water off Tanggu (1.22×107 m3/d).

  12. Factors Contributing to High CH4 and CO2 Efflux Rates from Thermokarst Lakes in the Rapidly Warming Hudson Bay Region

    NASA Astrophysics Data System (ADS)

    Matveev, A.; Vincent, W. F.; Laurion, I.

    2014-12-01

    Thermokarst lakes and ponds that form on thawing permafrost landscapes have long been recognized as biogeochemical reactors that emit significant amounts of CH4 and CO2. However, there is considerable uncertainty in the exact contribution of these water bodies to the global carbon cycle, in large part because of the paucity of observations from different ecosystem types across the circumpolar North, and the incomplete understanding of factors that control the balance between methane production (methanogenesis) and loss (methanotrophy). The aim of our research was to address these gaps by focusing on thermokarst lakes in subarctic Canada (eastern Hudson Bay), primarily at the southern limit of permafrost that is experiencing rapid warming, but where limnological changes have received little attention to date. Thermokarst lakes were sampled at five geographical locations that differed in their degree of permafrost degradation, as well as in carbon content and lability. All sampled lakes were supersaturated with CH4, with epilimnetic concentrations varying from CO2 undersaturation in turbid mineral (lithalsa) lakes of the continuous and discontinuous permafrost landscapes, to oversaturation by several orders of magnitude of both CO2 and CH4 in the organic-rich (palsa) lakes, especially in the areas of highly degraded permafrost at its southern limit. Concentrations and fluxes of CH4 and CO2 in these palsa lakes were at or above the highest values reported for thermokarst waters elsewhere. In addition, methane oxidation experiments showed high rates of methanotrophy that substantially reduced the net emission of CH4 from both lithalsa and palsa lake types. Our results imply that subarctic thermokarst lakes, especially those at the northward migrating permafrost margin, may be a major source of greenhouse gases as the circumpolar North continues to warm.

  13. Emission factors of SO2, NOx and particles from ships in Neva Bay from ground-based and helicopter-borne measurements and AIS-based modeling

    NASA Astrophysics Data System (ADS)

    Beecken, J.; Mellqvist, J.; Salo, K.; Ekholm, J.; Jalkanen, J.-P.; Johansson, L.; Litvinenko, V.; Volodin, K.; Frank-Kamenetsky, D. A.

    2014-10-01

    Emission factors of SO2, NOx and size distributed particle numbers were measured for approximately 300 different ships in the Gulf of Finland and Neva Bay area during two campaigns in August/September 2011 and June/July 2012. The measurements were carried out from a harbor vessel and from an MI-8 helicopter downwind of passing ships. Other measurements were carried out from shore sites near the island of Kronstadt and along the river Neva in the city area of Saint Petersburg. Most ships were running at reduced speed (10 knots), i.e. not at their optimal load. Vessels for domestic and international shipping were monitored. It was seen that the distribution of the SO2 emission factors is bi-modal with averages of 4.6 gSO2 kgfuel-1 and 18.2 gSO2 kgfuel-1 for the lower and the higher mode, respectively. The emission factors show compliance with the 1% fuel sulfur content SECA limit for 90% of the vessels in 2011 and 97% in 2012. The distribution of the NOx emission factor is mono-modal with an average of 58 gNOx kgfuel-1. The corresponding emission related to the generated power yields an average of 12.1 gNOx kWh-1. The distribution of the emission factors for particulate number shows that nearly 90% of all particles in the 5.6 nm to 10 μm size range were below 70 nm in diameter. The distribution of the corresponding emission factors for the mass indicates two separated main modes, one for particles between 30 and 300 nm the other above 2 μm. The average particle emission factors were found to be in the range from 0.7 to 2.7 × 1016 particles kgfuel-1 and 0.2 to 3.4 gPM kgfuel-1, respectively. The NOx and particulate emissions are comparable with other studies. The measured emission factors were compared, for individual ships, to modeled ones using the Ship Traffic Emission Assessment Model (STEAM) of the Finnish Meteorological Institute. A reasonably good agreement for gaseous sulfur and nitrogen emissions can be seen for ships in international traffic, but

  14. Emission factors of SO2, NOx and particles from ships in Neva Bay from ground-based and helicopter-borne measurements and AIS-based modeling

    NASA Astrophysics Data System (ADS)

    Beecken, J.; Mellqvist, J.; Salo, K.; Ekholm, J.; Jalkanen, J.-P.; Johansson, L.; Litvinenko, V.; Volodin, K.; Frank-Kamenetsky, D. A.

    2015-05-01

    Emission factors of SO2, NOx and size-distributed particle numbers were measured for approximately 300 different ships in the Gulf of Finland and Neva Bay area during two campaigns in August/September 2011 and June/July 2012. The measurements were carried out from a harbor vessel and from an Mi-8 helicopter downwind of passing ships. Other measurements were carried out from shore sites near the island of Kronstadt and along the Neva River in the urban area of Saint Petersburg. Most ships were running at reduced speed (10 kn), i.e., not at their optimal load. Vessels for domestic and international shipping were monitored. It was seen that the distribution of the SO2 emission factors is bi-modal, with averages of 4.6 and 18.2 gSO2 kgfuel-1 for the lower and the higher mode, respectively. The emission factors show compliance with the 1% fuel sulfur content Sulfur Emission Control Areas (SECA) limit for 90% of the vessels in 2011 and 97% in 2012. The distribution of the NOx emission factor is mono-modal, with an average of 58 gNOx kgfuel-1. The corresponding emission related to the generated power yields an average of 12.1 gNOx kWh-1. The distribution of the emission factors for particulate number shows that nearly 90% of all particles in the 5.6 nm to 10 μm size range were below 70 nm in diameter. The distribution of the corresponding emission factors for the mass indicates two separated main modes, one for particles between 30 and 300 nm and the other for above 2 μm. The average particle emission factors were found to be in the range from 0.7 to 2.7 × 1016 particles kgfuel-1 and 0.2 to 3.4 gPM kgfuel-1, respectively. The NOx and particulate emissions are comparable with other studies. The measured emission factors were compared, for individual ships, to modeled ones using the Ship Traffic Emission Assessment Model (STEAM) of the Finnish Meteorological Institute. A reasonably good agreement for gaseous sulfur and nitrogen emissions can be seen for ships in

  15. Bay 11-7082 inhibits transcription factor NF-kappaB and induces apoptosis of HTLV-I-infected T-cell lines and primary adult T-cell leukemia cells.

    PubMed

    Mori, Naoki; Yamada, Yasuaki; Ikeda, Shuichi; Yamasaki, Yoshihiro; Tsukasaki, Kunihiro; Tanaka, Yuetsu; Tomonaga, Masao; Yamamoto, Naoki; Fujii, Masahiro

    2002-09-01

    Human T-cell leukemia virus type I (HTLV-I) is the causative agent of an aggressive form of leukemia designated adult T-cell leukemia (ATL). We have previously demonstrated that all T-cell lines infected with HTLV-I and primary leukemic cells from ATL patients display constitutively high activity of transcription factor NF-kappaB. In this study we showed that Bay 11-7082, an inhibitor of NF-kappaB, induced apoptosis of HTLV-I-infected T-cell lines but only negligible apoptosis of HTLV-I-negative T cells. Bay 11-7082 rapidly and efficiently reduced the DNA binding of NF-kappaB in HTLV-I-infected T-cell lines and down-regulated the expression of the antiapoptotic gene, Bcl-x(L), regulated by NF-kappaB, whereas it had little effect on the DNA binding of another transcription factor, AP-1. Although the viral protein Tax is an activator of NF-kappaB, Bay 11-7082-induced apoptosis of HTLV-I-infected cells was not associated with reduced expression of Tax. Furthermore, Bay 11-7082- induced apoptosis of primary ATL cells was more prominent than that of normal peripheral blood mononuclear cells, and apoptosis of these cells was also associated with down-regulation of NF-kappaB activity. Our results indicate that NF-kappaB plays a crucial role in the pathogenesis and survival of HTLV-I-infected leukemic cells and that it is a suitable target for the prevention and treatment of ATL.

  16. Fractional randomness

    NASA Astrophysics Data System (ADS)

    Tapiero, Charles S.; Vallois, Pierre

    2016-11-01

    The premise of this paper is that a fractional probability distribution is based on fractional operators and the fractional (Hurst) index used that alters the classical setting of random variables. For example, a random variable defined by its density function might not have a fractional density function defined in its conventional sense. Practically, it implies that a distribution's granularity defined by a fractional kernel may have properties that differ due to the fractional index used and the fractional calculus applied to define it. The purpose of this paper is to consider an application of fractional calculus to define the fractional density function of a random variable. In addition, we provide and prove a number of results, defining the functional forms of these distributions as well as their existence. In particular, we define fractional probability distributions for increasing and decreasing functions that are right continuous. Examples are used to motivate the usefulness of a statistical approach to fractional calculus and its application to economic and financial problems. In conclusion, this paper is a preliminary attempt to construct statistical fractional models. Due to the breadth and the extent of such problems, this paper may be considered as an initial attempt to do so.

  17. Prophylaxis vs. on-demand treatment with BAY 81-8973, a full-length plasma protein-free recombinant factor VIII product: results from a randomized trial (LEOPOLD II)

    PubMed Central

    Kavakli, K; Yang, R; Rusen, L; Beckmann, H; Tseneklidou-Stoeter, D; Maas Enriquez, M

    2015-01-01

    Background BAY 81-8973 is a new full-length human recombinant factor VIII product manufactured with technologies to improve consistency in glycosylation and expression to optimize clinical performance. Objectives To demonstrate superiority of prophylaxis vs. on-demand therapy with BAY 81-8973 in patients with severe hemophilia A. Patients/Methods In this multinational, randomized, open-label crossover study (LEOPOLD II; ClinicalTrials.gov identifier: NCT01233258), males aged 12–65 years with severe hemophilia A were randomized to twice-weekly prophylaxis (20–30 IU kg−1), 3-times-weekly prophylaxis (30–40 IU kg−1), or on-demand treatment with BAY 81-8973. Potency labeling for BAY 81-8973 was based on the chromogenic substrate assay or adjusted to the one-stage assay. Primary efficacy endpoint was annualized number of all bleeds (ABR). Adverse events (AEs) and immunogenicity were also assessed. Results Eighty patients (on demand, n = 21; twice-weekly prophylaxis, n = 28; 3-times-weekly prophylaxis, n = 31) were treated and analyzed. Mean ± SD ABR was significantly lower with prophylaxis (twice-weekly, 5.7 ± 7.2; 3-times-weekly, 4.3 ± 6.5; combined, 4.9 ± 6.8) vs. on-demand treatment (57.7 ± 24.6; P < 0.0001, anova). Median ABR was reduced by 97% with prophylaxis (twice-weekly, 4.0; 3-times-weekly, 2.0; combined, 2.0) vs. on-demand treatment (60.0). Median ABR was higher with twice-weekly vs. 3-times-weekly prophylaxis during the first 6-month treatment period (4.1 vs. 2.0) but was comparable in the second 6-month period (1.1 vs. 2.0). Few patients reported treatment-related AEs (4%); no treatment-related serious AEs or inhibitors were reported. Conclusions Twice-weekly or 3-times-weekly prophylaxis with BAY 81-8973 reduced median ABR by 97% compared with on-demand therapy, confirming the superiority of prophylaxis. Treatment with BAY 81-8973 was well tolerated. PMID:25546368

  18. An Appetite for Fractions

    ERIC Educational Resources Information Center

    Wilkerson, Trena L.; Bryan, Tommy; Curry, Jane

    2012-01-01

    This article describes how using candy bars as models gives sixth-grade students a taste for learning to represent fractions whose denominators are factors of twelve. Using paper models of the candy bars, students explored and compared fractions. They noticed fewer different representations for one-third than for one-half. The authors conclude…

  19. Storage stability of keratinocyte growth factor-2 in lyophilized formulations: effects of formulation physical properties and protein fraction at the solid-air interface.

    PubMed

    Devineni, Dilip; Gonschorek, Christoph; Cicerone, Marcus T; Xu, Yemin; Carpenter, John F; Randolph, Theodore W

    2014-10-01

    Lyophilized formulations of keratinocyte growth factor-2 (KGF-2) were prepared with a range of disaccharide (sucrose or trehalose) and hydroxyethyl starch (HES) mass ratios. Protein degradation was assessed as a function of time of storage of the dried formulations at 40, 50 and 60°C. Lyophilized and stored samples were rehydrated, and protein degradation was quantified by measuring loss of monomeric protein with size exclusion chromatography and by determining chemical degradation in the soluble fraction with reverse-phase chromatography. The secondary structure of the protein in the lyophilized formulations was studied with infrared spectroscopy. The magnitudes of degradation were compared the key physical properties of the formulations including retention of protein native secondary structure, glass transition temperature (Tg), inverse mean square displacements 〈u(2)〉(-1) for hydrogen atoms (fast β relaxation), and the relaxation time τ(β), which correlates with relaxation due to fast Johari-Goldstein motions in the glass (Xu et al., 2013) [1]. In addition, specific surface areas of the lyophilized formulations were determined by Brunauer-Emmet-Teller analysis of krypton adsorption isotherms and used to estimate the fraction of the KGF-2 molecules residing at the solid-air interface. KGF-2 degradation rates were highest in formulations wherein the protein's structure was most perturbed, and wherein β relaxations were fastest, but the dominant factor governing KGF-2 degradation in freeze-dried formulations was the fraction of the protein found at the glass solid-air interface. PMID:24859390

  20. Gallotannin-rich Caesalpinia spinosa fraction decreases the primary tumor and factors associated with poor prognosis in a murine breast cancer model

    PubMed Central

    2013-01-01

    Background Several treatment alternatives are available for primary breast cancer, although those for metastatic disease or inflammation associated with tumor progression are ineffective. Therefore, there is a great need for new therapeutic alternatives capable of generating an immune response against residual tumor cells, thus contributing to eradication of micrometastases and cancer stem cells. The use of complex natural products is an excellent therapeutic alternative widely used by Chinese, Hindu, Egyptian, and ancestral Latin-American Indian populations. Methods The present study evaluated cytotoxic, antitumor, and tumor progression activities of a gallotannin-rich fraction derived from Caesalpinia spinosa (P2Et). The parameters evaluated in vitro were mitochondrial membrane depolarization, phosphatidylserine externalization, caspase 3 activation, DNA fragmentation, and clonogenic activity. The parameters evaluated in vivo were tumor growth, leukocyte number, metastatic cell number, and cytokine production by flow cytometry. Results The in vitro results showed that the P2Et fraction induced apoptosis with mitochondrial membrane potential loss, phosphatidylserine externalization, caspase 3 activation, DNA fragmentation, and decreased clonogenic capacity of 4T1 cells. In vivo, the P2Et fraction induced primary tumor reduction in terms of diameter and weight in BALB/c mice transplanted with 4T1 cells and decreased numbers of metastatic cells, mainly in the spleen. Furthermore, decreases in the number of peripheral blood leukocytes (leukemoid reaction) and interleukin 6 (IL-6) serum levels were found, which are events associated with a poor prognosis. The P2Et fraction exerts its activity on the primary tumor, reduces cell migration to distant organs, and decreases IL-6 serum levels, implying tumor microenvironment mechanisms. Conclusions Overall, the P2Et fraction lessens risk factors associated with tumor progression and diminishes primary tumor size, showing

  1. Carbon Biogeochemistry in Baffin Bay

    NASA Astrophysics Data System (ADS)

    Thomas, Helmuth; Shadwick, Elizabeth H.; Dehairs, Frank; Gratton, Yves

    2013-04-01

    The Arctic Ocean and its carbon cycle are expected to be disproportionately sensitive to climatic change and, thus the Arctic is thought to be an area where such changes may most easily be detected. In particular the carbon cycle in polar ocean is vulnerable due to the relatively high Revelle factor and correspondingly weaker CO2 buffer capacity. The Arctic ocean is influenced by runoff and precipitation, sea ice formation and melting, and the inflow of saline waters from Bering and Fram Straits as well as the Barents Sea Shelf. Pacific water is recognizable as low(er) salinity water, with high concentrations of dissolved inorganic carbon, flowing from the Arctic Ocean to the North Atlantic via the Canadian Arctic Archipelago. In the Baffin Bay area, at the eastern entrance to the Canadian Arctic Archipelago, the water masses of three major oceans meet. Atlantic Ocean water traveling into Baffin Bay as the east Greenland current mixes with waters from the Arctic Ocean and the Pacific Ocean, which enter Baffin Bay via Nares Strait and various outflows of the Canadian Arctic Archipelago, before the waters head southward along the western side of Baffin Bay, eventually feeding into the Labrador Current and the North Atlantic Ocean. Altered mixing ratios of these three water masses and freshwater in the Arctic Ocean have been recorded in recent decades. Any climatically driven alterations in the composition of waters leaving Baffin Bay may have implications for anthropogenic CO2 uptake and, hence, acidification, of the subpolar and temperate North Atlantic. We present carbon cycle, Barium and stable oxygen isotope composition data of sea water and related data from two east to west section across Baffin Bay at 75N and 76N as well as from shelf sections long the eastern and western shelves of Baffin Bay. We investigate water mass characteristics and mixing pattern of the above three major water masses in Baffin Bay. The data have been collected in the framework of two

  2. Features of winter sedimentation processes in Curonian Bay of the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Kravtsov, V. A.; Emelyanov, E. M.

    2016-03-01

    The concentration distribution was studied for dissolved oxygen, phosphorus forms, and particulate matter in Curonian Bay of the Baltic Sea in poorly known consolidated ice cover conditions during the winter seasons of 2010, 2011, and 2013. The surface and near-bottom waters were sampled at 51 stations. The ice cover exerts no significant effect on the typical seasonal variation of all considered parameters in the basin. The concentrations of mineral and organic phosphorus in the bay appeared to be lower by factors of 2-4 compared to summer values. A two- to threefold decrease in the concentrations of organic phosphorus since 2010 to 2011 and then to 2013 was recorded in the bay, which resulted from a decrease in phosphorus production by phytoplankton. Despite water being isolated from air by ice, the absence of wave mixing, and the decrease in oxygen production owing to the seasonal winter decrease in the intensity photosynthetic processes, no oxygen deficiency was found in the basin. This is because oxygen supplied to the bay by river runoff and production by photosynthesis in the bay exceed the utilization for oxidation of organic matter resulting from low bioproductivity of the waters during winter. The winter decrease in the fraction of biogenic particulate matter is seen as a four- to sevenfold drop in its total concentration in the waters compared to summer seasons. The absence of wave roiling of bottom sediments also caused a decrease in the secondary supply of biogenic particulate matter from sediments into near-bottom waters. No negative trends of geoecological conditions in the bay were revealed by the studied parameters under consolidated ice cover conditions.

  3. Posttraumatic Stress Disorder After High-Dose-Rate Brachytherapy for Cervical Cancer With 2 Fractions in 1 Application Under Spinal/Epidural Anesthesia: Incidence and Risk Factors

    SciTech Connect

    Kirchheiner, Kathrin; Czajka-Pepl, Agnieszka; Scharbert, Gisela; Wetzel, Léonore; Sturdza, Alina; Dörr, Wolfgang; Pötter, Richard

    2014-06-01

    Purpose: To investigate the psychological consequences of high-dose-rate brachytherapy with 2 fractions in 1 application under spinal/epidural anesthesia in the treatment of locally advanced cervical cancer. Methods and Materials: In 50 patients with locally advanced cervical cancer, validated questionnaires were used for prospective assessment of acute and posttraumatic stress disorder (ASD/PTSD) (Impact of Event Scale–Revision), anxiety/depression (Hospital Anxiety and Depression Scale), quality of life (European Organization for Research and Treatment of Cancer Quality of Life Questionnaire Core 30/Cervical Cancer 24), physical functioning (World Health Organization performance status), and pain (visual analogue scale), before and during treatment and 1 week and 3 months after treatment. Qualitative interviews were recorded in open format for content analysis. Results: Symptoms of ASD occurred in 30% of patients 1 week after treatment; and of PTSD in 41% 3 months after treatment in association with this specific brachytherapy procedure. Pretreatment predictive variables explain 82% of the variance of PTSD symptoms. Helpful experiences were the support of the treatment team, psychological support, and a positive attitude. Stressful factors were pain, organizational problems during treatment, and immobility between brachytherapy fractions. Conclusions: The specific brachytherapy procedure, as performed in the investigated mono-institutional setting with 2 fractions in 1 application under spinal/epidural anesthesia, bears a considerable risk of traumatization. The source of stress seems to be not the brachytherapy application itself but the maintenance of the applicator under epidural anesthesia in the time between fractions. Patients at risk may be identified before treatment, to offer targeted psycho-social support. The patients' open reports regarding helpful experiences are an encouraging feedback for the treatment team; the reported stressful factors

  4. The IKK inhibitor Bay 11-7082 induces cell death independent from inhibition of activation of NFκB transcription factors.

    PubMed

    Rauert-Wunderlich, Hilka; Siegmund, Daniela; Maier, Eduard; Giner, Tina; Bargou, Ralf C; Wajant, Harald; Stühmer, Thorsten

    2013-01-01

    Multiple myeloma (MM) displays an NFκB activity-related gene expression signature and about 20% of primary MM samples harbor genetic alterations conducive to intrinsic NFκB signaling activation. The relevance of blocking the classical versus the alternative NFκB signaling pathway and the molecular execution mechanisms involved, however, are still poorly understood. Here, we comparatively tested NFκB activity abrogation through TPCA-1 (an IKK2 inhibitor), BAY 11-7082 (an IKK inhibitor poorly selective for IKK1 and IKK2), and MLN4924 (an NEDD8 activating enzyme (NAE)-inhibitor), and analyzed their anti-MM activity. Whereas TPCA-1 interfered selectively with activation of the classical NFκB pathway, the other two compounds inhibited classical and alternative NFκB signaling without significant discrimination. Noteworthy, whereas TPCA-1 and MLN4924 elicited rather mild anti-MM effects with slight to moderate cell death induction after 1 day BAY 11-7082 was uniformly highly toxic to MM cell lines and primary MM cells. Treatment with BAY 11-7082 induced rapid cell swelling and its initial effects were blocked by necrostatin-1 or the ROS scavenger BHA, but a lasting protective effect was not achieved even with additional blockade of caspases. Because MLN4924 inhibits the alternative NFκB pathway downstream of IKK1 at the level of p100 processing, the quite discordant effects between MLN4924 and BAY 11-7082 must thus be due to blockade of IKK1-mediated NFκB-independent necrosis-inhibitory functions or represent an off-target effect of BAY 11-7082. In accordance with the latter, we further observed that concomitant knockdown of IKK1 and IKK2 did not have any major short-term adverse effect on the viability of MM cells.

  5. The IKK inhibitor Bay 11-7082 induces cell death independent from inhibition of activation of NFκB transcription factors.

    PubMed

    Rauert-Wunderlich, Hilka; Siegmund, Daniela; Maier, Eduard; Giner, Tina; Bargou, Ralf C; Wajant, Harald; Stühmer, Thorsten

    2013-01-01

    Multiple myeloma (MM) displays an NFκB activity-related gene expression signature and about 20% of primary MM samples harbor genetic alterations conducive to intrinsic NFκB signaling activation. The relevance of blocking the classical versus the alternative NFκB signaling pathway and the molecular execution mechanisms involved, however, are still poorly understood. Here, we comparatively tested NFκB activity abrogation through TPCA-1 (an IKK2 inhibitor), BAY 11-7082 (an IKK inhibitor poorly selective for IKK1 and IKK2), and MLN4924 (an NEDD8 activating enzyme (NAE)-inhibitor), and analyzed their anti-MM activity. Whereas TPCA-1 interfered selectively with activation of the classical NFκB pathway, the other two compounds inhibited classical and alternative NFκB signaling without significant discrimination. Noteworthy, whereas TPCA-1 and MLN4924 elicited rather mild anti-MM effects with slight to moderate cell death induction after 1 day BAY 11-7082 was uniformly highly toxic to MM cell lines and primary MM cells. Treatment with BAY 11-7082 induced rapid cell swelling and its initial effects were blocked by necrostatin-1 or the ROS scavenger BHA, but a lasting protective effect was not achieved even with additional blockade of caspases. Because MLN4924 inhibits the alternative NFκB pathway downstream of IKK1 at the level of p100 processing, the quite discordant effects between MLN4924 and BAY 11-7082 must thus be due to blockade of IKK1-mediated NFκB-independent necrosis-inhibitory functions or represent an off-target effect of BAY 11-7082. In accordance with the latter, we further observed that concomitant knockdown of IKK1 and IKK2 did not have any major short-term adverse effect on the viability of MM cells. PMID:23527154

  6. The IKK Inhibitor Bay 11-7082 Induces Cell Death Independent from Inhibition of Activation of NFκB Transcription Factors

    PubMed Central

    Rauert-Wunderlich, Hilka; Siegmund, Daniela; Maier, Eduard; Giner, Tina; Bargou, Ralf C.; Wajant, Harald; Stühmer, Thorsten

    2013-01-01

    Multiple myeloma (MM) displays an NFκB activity-related gene expression signature and about 20% of primary MM samples harbor genetic alterations conducive to intrinsic NFκB signaling activation. The relevance of blocking the classical versus the alternative NFκB signaling pathway and the molecular execution mechanisms involved, however, are still poorly understood. Here, we comparatively tested NFκB activity abrogation through TPCA-1 (an IKK2 inhibitor), BAY 11-7082 (an IKK inhibitor poorly selective for IKK1 and IKK2), and MLN4924 (an NEDD8 activating enzyme (NAE)-inhibitor), and analyzed their anti-MM activity. Whereas TPCA-1 interfered selectively with activation of the classical NFκB pathway, the other two compounds inhibited classical and alternative NFκB signaling without significant discrimination. Noteworthy, whereas TPCA-1 and MLN4924 elicited rather mild anti-MM effects with slight to moderate cell death induction after 1 day BAY 11-7082 was uniformly highly toxic to MM cell lines and primary MM cells. Treatment with BAY 11-7082 induced rapid cell swelling and its initial effects were blocked by necrostatin-1 or the ROS scavenger BHA, but a lasting protective effect was not achieved even with additional blockade of caspases. Because MLN4924 inhibits the alternative NFκB pathway downstream of IKK1 at the level of p100 processing, the quite discordant effects between MLN4924 and BAY 11-7082 must thus be due to blockade of IKK1-mediated NFκB-independent necrosis-inhibitory functions or represent an off-target effect of BAY 11-7082. In accordance with the latter, we further observed that concomitant knockdown of IKK1 and IKK2 did not have any major short-term adverse effect on the viability of MM cells. PMID:23527154

  7. Λb→Λ ℓ+ℓ- form factors, differential branching fraction, and angular observables from lattice QCD with relativistic b quarks

    NASA Astrophysics Data System (ADS)

    Detmold, William; Meinel, Stefan

    2016-04-01

    Using (2 +1 )-flavor lattice QCD, we compute the 10 form factors describing the Λb→Λ matrix elements of the b →s vector, axial vector, and tensor currents. The calculation is based on gauge field ensembles generated by the RBC and UKQCD Collaborations with a domain-wall action for the u , d , and s quarks and the Iwasaki gauge action. The b quark is implemented using an anisotropic clover action, tuned nonperturbatively to the physical point, and the currents are renormalized with a mostly nonperturbative method. We perform simultaneous chiral, continuum, and kinematic extrapolations of the form factors through modified z expansions. Using our form factor results, we obtain precise predictions for the Λb→Λ (→p+π-)μ+μ- differential branching fraction and angular observables in the Standard Model.

  8. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sturgeon Bay, Sturgeon Bay, Wis... ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1. Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light...

  9. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Sturgeon Bay, Sturgeon Bay, Wis... ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1. Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light...

  10. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Sturgeon Bay, Sturgeon Bay, Wis... ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1. Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light...

  11. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sturgeon Bay, Sturgeon Bay, Wis... ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1. Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light...

  12. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Sturgeon Bay, Sturgeon Bay, Wis... ANCHORAGES ANCHORAGE REGULATIONS Special Anchorage Areas § 110.78 Sturgeon Bay, Sturgeon Bay, Wis. (a) Area 1. Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light...

  13. The Magnitude of Mortality from Ischemic Heart Disease Attributed to Occupational Factors in Korea - Attributable Fraction Estimation Using Meta-analysis

    PubMed Central

    Ha, Jaehyeok; Paek, Domyung; Park, Jungsun

    2011-01-01

    Objectives Ischemic heart disease (IHD) is a major cause of death in Korea and known to result from several occupational factors. This study attempted to estimate the current magnitude of IHD mortality due to occupational factors in Korea. Methods After selecting occupational risk factors by literature investigation, we calculated attributable fractions (AFs) from relative risks and exposure data for each factor. Relative risks were estimated using meta-analysis based on published research. Exposure data were collected from the 2006 Survey of Korean Working Conditions. Finally, we estimated 2006 occupation-related IHD mortality. Results For the factors considered, we estimated the following relative risks: noise 1.06, environmental tobacco smoke 1.19 (men) and 1.22 (women), shift work 1.12, and low job control 1.15 (men) and 1.08 (women). Combined AFs of those factors in the IHD were estimated at 9.29% (0.3-18.51%) in men and 5.78% (-7.05-19.15%) in women. Based on these fractions, Korea's 2006 death toll from occupational IHD between the age of 15 and 69 was calculated at 353 in men (total 3,804) and 72 in women (total 1,246). Conclusion We estimated occupational IHD mortality of Korea with updated data and more relevant evidence. Despite the efforts to obtain reliable estimates, there were many assumptions and limitations that must be overcome. Future research based on more precise design and reliable evidence is required for more accurate estimates. PMID:22953190

  14. Mercury distribution and bioaccumulation in a temperate estuary: Masan Bay, Korea

    NASA Astrophysics Data System (ADS)

    Noh, S.; Kim, E.; Kundu, S. R.; Lee, B.; Han, S.

    2012-12-01

    Masan Bay is a semi-closed and temperate estuary located on the southeastern coast of Korea. Since it is surrounded by highly populated cities (Masan, Changwon, and Jinhae) and large industrial complexes (petrochemical, electrical, plastic, and metal industries), Masan Bay is contaminated with PCBs and PBDEs, as well as heavy metals. In the current study, we investigated the distribution and sources of Hg and methylmercury (MeHg) in surface water, sediment, and biota from Masan Bay, as well as the impact of sediment organic matter and acid-volatile sulfide on the MeHg fraction over the total Hg, as a proxy of MeHg production potential. Concentrations of Hg in the surface seawater and sediment ranged from 1.2 to 5.1 pM and 0.02 to 0.73 nmol g-1, respectively. The Hg input estimation showed that river water discharge is the prime input source of Hg into the bay. This agrees with the sediment Hg distribution, showing a gradual decrease from the inner bay sites toward the mouth of the bay. Concentrations of MeHg in surface seawater and sediment ranged from 0.02 to 0.41 pM and 0.19 to 1.88 pmol g-1, respectively. The MeHg flux estimation showed that the submarine groundwater discharge is the prime input source of MeHg. Sediment %MeHg was significantly higher in the outer bay sites, with a negative correlation with sediment organic matter content. A similar negative relationship was found for AVS and %MeHg. The solid-phase retention of inorganic Hg as a result of Hg binding by sediment organic matter seems to be a key-process to control Hg methylation potential in Masan Bay sediments. The estimated food web magnification factors Hg and MeHg in benthic organisms were 0.119 and 0.168, respectively, which were similar to those of various coastal marine environments. The food web magnification factors for pelagic organisms were higher than benthic organisms, suggesting that pelagic organisms might be at greater risk of Hg and MeHg accumulation.

  15. Measurement of the B0 to pi l nu Form Factor Shape and Branching Fraction, and Determination of |Vub| with a Loose Neutrino Reconstruction Technique

    SciTech Connect

    Cote, D

    2006-09-26

    The authors report the results of a study of the exclusive charmless semileptonic B{sup 0} {yields} {pi}{sup -}{ell}{sup +}{nu} decay undertaken with approximately 227 million B{bar B} pairs collected at the {Upsilon}(4S) resonance with the BABAR detector. The analysis uses events in which the signal B mesons are reconstructed with a novel loose neutrino reconstruction technique. We obtain partial branching fractions in 12 bins of q{sup 2}, the {ell}{sup +}{nu} invariant mass squared, from which we extract the f{sup +}(q{sup 2}) form factor shape and the total branching fraction: {Beta}(B{sup 0} {yields} {pi}{sup -}{ell}{sup +}{nu}) = 1.44 {+-} 0.08{sub stat} {+-} 0.10{sub syst} x 10{sup -4}. Based on a recent theoretical calculation of the form factor, we find the magnitude of the CKM matrix element |V{sub ub}| to be (4.1 {+-} 0.2{sub stat} {+-} 0.2{sub syst{sub -0.4}{sup +0.6}}FF) x 10{sup -3}, where the last uncertainty is due to the normalization of the form factor.

  16. Adding insult to injury: childhood and adolescent risk factors for psychosis predict lower fractional anisotropy in the superior longitudinal fasciculus in healthy adults.

    PubMed

    DeRosse, Pamela; Ikuta, Toshikazu; Peters, Bart D; Karlsgodt, Katherine H; Szeszko, Philip R; Malhotra, Anil K

    2014-12-30

    Although epidemiological studies provide strong support for demographic and environmental risk factors in psychotic disorders, few data examine how these risk factors relate to the putative aberrant neurodevelopment associated with illness. The present study examined how the accumulation of risk factors including low IQ, low parental socioeconomic status (SES), history of adolescent cannabis use and childhood trauma, and high levels of subclinical psychotic-like experiences (PLEs) contributed to aberrant neurodevelopmental outcomes in 112 otherwise healthy adults recruited from the community. Participants were studied with diffusion tensor imaging (DTI), and voxel-wise statistical analysis of fractional anisotropy (FA) using tract-based spatial statistics (TBSS) was used to examine the relation between cumulative risk (CR) for psychosis and white matter (WM) integrity across the whole brain. Analyses revealed that higher CR was significantly associated with lower FA in a cluster in the left superior longitudinal fasciculus (SLF). These results suggest that risk factors previously associated with psychotic disorders are associated with WM integrity even in otherwise healthy adults and may provide insight into how previously identified risk factors contribute to the structural brain abnormalities associated with psychotic illness. Prospective longitudinal studies examining the effect of risk factors on the developmental trajectory of brain WM are warranted. PMID:25277095

  17. Adding insult to injury: childhood and adolescent risk factors for psychosis predict lower fractional anisotropy in the superior longitudinal fasciculus in healthy adults.

    PubMed

    DeRosse, Pamela; Ikuta, Toshikazu; Peters, Bart D; Karlsgodt, Katherine H; Szeszko, Philip R; Malhotra, Anil K

    2014-12-30

    Although epidemiological studies provide strong support for demographic and environmental risk factors in psychotic disorders, few data examine how these risk factors relate to the putative aberrant neurodevelopment associated with illness. The present study examined how the accumulation of risk factors including low IQ, low parental socioeconomic status (SES), history of adolescent cannabis use and childhood trauma, and high levels of subclinical psychotic-like experiences (PLEs) contributed to aberrant neurodevelopmental outcomes in 112 otherwise healthy adults recruited from the community. Participants were studied with diffusion tensor imaging (DTI), and voxel-wise statistical analysis of fractional anisotropy (FA) using tract-based spatial statistics (TBSS) was used to examine the relation between cumulative risk (CR) for psychosis and white matter (WM) integrity across the whole brain. Analyses revealed that higher CR was significantly associated with lower FA in a cluster in the left superior longitudinal fasciculus (SLF). These results suggest that risk factors previously associated with psychotic disorders are associated with WM integrity even in otherwise healthy adults and may provide insight into how previously identified risk factors contribute to the structural brain abnormalities associated with psychotic illness. Prospective longitudinal studies examining the effect of risk factors on the developmental trajectory of brain WM are warranted.

  18. Effect of thallium fractions in the soil and pollution origins on Tl uptake by hyperaccumulator plants: a key factor for the assessment of phytoextraction.

    PubMed

    Al-Najar, H; Kaschl, A; Schulz, R; Römheld, V

    2005-01-01

    Phytoremediation is often discussed as a means of extracting trace metals in excess in the soil, but to increase its efficiency a better understanding of the factors controlling plant uptake is required. The main objective of this study was to examine the effect of origin (anthropogenic vs. geogenic) and mobility of thallium (Tl) in the rhizosphere on Tl uptake. Two Tl-hyperaccumulating Brassicaceae species, kale (Brassica oleracea acephala L. cv. Winterbor F1) and candytuft (Iberis intermedia Guers.), were grown in a rhizobox system to investigate the dynamics of Tl in the rhizosphere soil. Four different soils were used. Two soils contained high Tl amounts due to anthropogenic sources (emissions from a cement plant and mining activities). High Tl content in the two other soils was due to a high rock content (geogenic origin). On completion of growth in the rhizoboxes, the depletion of Tl in seven different chemical fractions, determined by sequential extraction, was compared to the plant uptake. Most of the Tl taken up was derived from the so-called "easily accessible" fractions in both soils with geogenic Tl as well as in the soils polluted by mining activities. Due to the small amounts of easily accessible Tl in the geogenic soils, Tl uptake by Brassicaceae was low. On the other hand, for the air emission-polluted soil, a high depletion of Tl from "less accessible" fractions was observed in addition to depletion of the easily accessible fractions. Hence, the latter soil demonstrated the highest potential for effective soil decontamination by phytoextraction within an appropriate time frame.

  19. K, Rb, Sr, Ba, U and Th geochemistry of the Lapland Granulites (Fennoscandia). LILE fractionation controlling factors

    NASA Astrophysics Data System (ADS)

    Barbey, P.; Cuney, M.

    1982-12-01

    The LILE geochemical patterns of the three main lithological units (graywacke-shale metasedimentary sequence, tholeiitic metaigneous rocks and migmatitic rocks) of the Lapland Granulite belt are described. K, Ba, Sr and Th concentrations in metasediments are nearly similar to average continental crust, whereas Rb and U are unevenly impoverished. In particular graphitic metashales and calcsilicate rocks are not significantly depleted in uranium. Tholeiitic metaigneous rocks comprises metavolcanics which present K/Rb ratios similar to metasediments, and metaplutonics with LILE abundances close to those of the low-K-tholeiites. Migmatites show wide range in LILE content. Metatexites and diatexites have higher K, Rb, Th and U concentrations and similar K/Rb ratios with respect to equivalent unmobilized rocks. Potassic pegmatoïds are strongly enriched K, Rb, Ba and Th but moderately in Sr and U. Plagioclasic pegmatoids and ferromagnesian restites are rich in Sr and poor in other LIL elements. A comparative review of the LILE geochemistry between Lapland granulites and equivalent lithological units taken from non metamorphosed to high grade terrains suggest that fractionation processes are not systematic but controlled by original lithology and mineralogy, mineral — fluid equilibria during progressive (or retrogressive) metamorphism and mineral-melt-fluid equilibria during anatexis. Moreover, statistical analysis on K-Rb distribution patterns in these various rock types shows that there is no metamorphic trend characteristic of granulite facies terrains as previously suggested.

  20. Bay of Fundy

    NASA Technical Reports Server (NTRS)

    2006-01-01

    The highest tides on Earth occur in the Minas Basin, the eastern extremity of the Bay of Fundy, Nova Scotia, Canada, where the tide range can reach 16 meters when the various factors affecting the tides are in phase. The primary cause of the immense tides of Fundy is a resonance of the Bay of Fundy-Gulf of Maine system. The system is effectively bounded at this outer end by the edge of the continental shelf with its approximately 40:1 increase in depth. The system has a natural period of approximately 13 hours, which is close to the 12h25m period of the dominant lunar tide of the Atlantic Ocean. Like a father pushing his daughter on a swing, the gentle Atlantic tidal pulse pushes the waters of the Bay of Fundy-Gulf of Maine basin at nearly the optimum frequency to cause a large to-and-fro oscillation. The greatest slosh occurs at the head (northeast end) of the system. The high tide image (top) was acquired April 20, 2001, and the low tide image (bottom) was acquired September 30, 2002. The images cover an area of 16.5 by 21 km, and are centered near 64 degrees west longitude and 45.5 degrees north latitude.

    With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet.

    ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products.

    The broad spectral coverage and high spectral resolution of ASTER provides scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active

  1. The Incidence of Coronary Heart Disease and the Population Attributable Fraction of Its Risk Factors in Tehran: A 10-Year Population-Based Cohort Study

    PubMed Central

    Khalili, Davood; Haj Sheikholeslami, Farhad; Bakhtiyari, Mahmood; Azizi, Fereidoun; Momenan, Amir Abbas; Hadaegh, Farzad

    2014-01-01

    Background Data on incidence of coronary heart disease (CHD) is scarce in the Middle East and little is known about the contribution of known risk factors in this area. Methods The incidence of CHD and the effect of modifiable risk factors were explored in 2889 men and 3803 women aged 30–74 years in the population based cohort of the Tehran Lipid and Glucose Study, during 1999–2010. Average population attributable fraction (aPAF) was calculated for any risk factor using direct method based on regression model. Results The crude incidence rate in men was about twice that in women (11.9 vs. 6.5 per 1000 person-years). The aPAF of hypertension, diabetes, high total cholesterol and low-HDL cholesterol was 9.4%, 6.7%, 7.3% and 6.1% in men and 17%, 16.6%, 12% and 4.6% in women respectively. This index was 7.0% for smoking in men. High risk age contributed to 42% and 22% of risk in men and women respectively. Conclusions The incidence in this population of Iran was comparable to those in the US in the seventies. Well known modifiable risk factors explained about 40% and 50% of CHD burden in men and women respectively. Aging, as a reflection of unmeasured or unknown risk factors, bears the most burden of CHD, especially in men; indicating more age-related health care is required. PMID:25162590

  2. Tampa Bay: Chapter N

    USGS Publications Warehouse

    Handley, Larry; Spear, Kathryn; Cross, Lindsay; Baumstark, René; Moyer, Ryan; Thatcher, Cindy

    2013-01-01

    Tampa Bay is Florida’s largest open-water estuary and encompasses an area of approximately 1036 km2 (400 mi2) (Burgan and Engle, 2006; TBNEP, 2006). The Bay’s watershed drains 5,698 km2 (2,200 mi2) of land and includes freshwater from the Hillsborough River to the north east, the Alafia and Little Manatee rivers to the east, and the Manatee River to the south (Figure 1). Freshwater inflow also enters the bay from the Lake Tarpon Canal, from small tidal tributaries, and from watershed runoff. Outflow travels from the upper bay segments (Hillsborough Bay and Old Tampa Bay) into Middle and Lower Tampa Bay. Southwestern portions of the water shed flow through Boca Ciega Bay into the Intracoastal Waterway and through the Southwest Channel and Passage Key Inlet into the Gulf of Mexico. The average depth in most of Tampa Bay is only 3.4 m (11 ft); however, 129 km (80 mi) of shipping channels with a maximum depth of 13.1 m (43 ft) have been dredged over time and are regularly maintained. These channels help to support the three ports within the bay, as well as commercial and recreational boat traffic.

  3. CASCO BAY PLAN

    EPA Science Inventory

    Casco Bay lies at the heart of Maine's most populated area. The health of its waters, wetlands, and wildlife depend in large part on the activities of the quarter-million residents who live in its watershed. Less than 30 years ago, portions of Casco Bay were off-limits to recr...

  4. Bay Mills' Bold Approach

    ERIC Educational Resources Information Center

    Freedman, Eric

    2011-01-01

    It's a long, long way from Bay Mills Community College, near the shores of frigid Lake Superior, to Detroit. But distance, time and demographics aside, the school and the city are united by Bay Mills' status as the nation's only tribally controlled college that authorizes quasi-public schools, known officially as public school academies. And it's…

  5. Circulating Fibroblast Growth Factor 21 is Associated with Diastolic Dysfunction in Heart Failure Patients with Preserved Ejection Fraction.

    PubMed

    Chou, Ruey-Hsing; Huang, Po-Hsun; Hsu, Chien-Yi; Chang, Chun-Chin; Leu, Hsin-Bang; Huang, Chin-Chou; Chen, Jaw-Wen; Lin, Shing-Jong

    2016-01-01

    Fibroblast growth factor 21 (FGF21), a polypeptide ligand promoted glucose homeostasis and lipids metabolism, was recently reported to attenuate cardiac hypertrophy. The aim of this study was to investigate the impact of FGF21 in diastolic heart failure. Subjects admitted for coronary angiogram were screened for heart failure, and those with left ventricular (LV) ejection fraction < 45% were excluded. Diastolic dysfunction was defined as functional abnormalities that exist during LV relaxation and filling by echocardiographic criteria. Plasma levels of FGF21 and N-terminal Pro-Brain Natriuretic Peptide (NT-pro-BNP) were determined. All patients were followed up for 1 year, or till the occurrence of heart failure readmission or death. Totally 95 patients with diastolic dysfunction and 143 controls were enrolled. Circulating FGF21 level was correlated with echocardiographic parameters of diastolic function and LV end-diastolic pressure (LVEDP). In multivariate logistic analysis, FGF21 was significantly associated with diastolic dysfunction, either identified by echocardiographic criteria (odds ratio: 2.97, p = 0.012) or confirmed with LVEDP level (odds ratio: 3.73, p = 0.030). Both plasma FGF21 (log rank p < 0.0001) and NT-pro-BNP levels (log rank p = 0.0057) showed good predictive power to the 1-year adverse cardiac events. This finding suggested FGF21 could be involved in the pathophysiology of diastolic heart failure. PMID:27650781

  6. Circulating Fibroblast Growth Factor 21 is Associated with Diastolic Dysfunction in Heart Failure Patients with Preserved Ejection Fraction

    PubMed Central

    Chou, Ruey-Hsing; Huang, Po-Hsun; Hsu, Chien-Yi; Chang, Chun-Chin; Leu, Hsin-Bang; Huang, Chin-Chou; Chen, Jaw-Wen; Lin, Shing-Jong

    2016-01-01

    Fibroblast growth factor 21 (FGF21), a polypeptide ligand promoted glucose homeostasis and lipids metabolism, was recently reported to attenuate cardiac hypertrophy. The aim of this study was to investigate the impact of FGF21 in diastolic heart failure. Subjects admitted for coronary angiogram were screened for heart failure, and those with left ventricular (LV) ejection fraction < 45% were excluded. Diastolic dysfunction was defined as functional abnormalities that exist during LV relaxation and filling by echocardiographic criteria. Plasma levels of FGF21 and N-terminal Pro-Brain Natriuretic Peptide (NT-pro-BNP) were determined. All patients were followed up for 1 year, or till the occurrence of heart failure readmission or death. Totally 95 patients with diastolic dysfunction and 143 controls were enrolled. Circulating FGF21 level was correlated with echocardiographic parameters of diastolic function and LV end-diastolic pressure (LVEDP). In multivariate logistic analysis, FGF21 was significantly associated with diastolic dysfunction, either identified by echocardiographic criteria (odds ratio: 2.97, p = 0.012) or confirmed with LVEDP level (odds ratio: 3.73, p = 0.030). Both plasma FGF21 (log rank p < 0.0001) and NT-pro-BNP levels (log rank p = 0.0057) showed good predictive power to the 1-year adverse cardiac events. This finding suggested FGF21 could be involved in the pathophysiology of diastolic heart failure. PMID:27650781

  7. Diagnostic model construction and example analysis of habitat degradation in enclosed bay: III. Sansha Bay habitat restoration strategy

    NASA Astrophysics Data System (ADS)

    Sun, Peng; Yu, Ge; Chen, Zhaozhang; Hu, Jianyu; Liu, Guangxing; Xu, Donghui

    2014-09-01

    Unbalanced inputs and outputs of material are the root cause of habitat degradation in Sansha Bay, Fujian Province, China. However, the cumulative pollution varies in different geographic locations and natural conditions in the enclosed bay. In this study, hydrodynamic conditions, sediment characteristics, and aquaculture methods were recognized as the underlying causes of spatial heterogeneity in the distribution of nitrogen and phosphorous pollutants, the two major controlling factors of habitat degradation in the bay area. In order to achieve the goal of balancing nutrient inputs and outputs in Sansha Bay, we developed a feasible and practical zone restoration strategy for reasonable adjustment and arrangement of aquaculture species and production scale in accordance with varying hydrodynamic conditions and sediment characteristics in six sub-bay areas (sub-systems). The proposed zone restoration strategy lays a solid foundation for habitat restoration and management in Sansha Bay.

  8. Diagnostic model construction and example analysis of habitat degradation in enclosed bay: III. Sansha Bay habitat restoration strategy

    NASA Astrophysics Data System (ADS)

    Sun, Peng; Yu, Ge; Chen, Zhaozhang; Hu, Jianyu; Liu, Guangxing; Xu, Donghui

    2015-03-01

    Unbalanced inputs and outputs of material are the root cause of habitat degradation in Sansha Bay, Fujian Province, China. However, the cumulative pollution varies in different geographic locations and natural conditions in the enclosed bay. In this study, hydrodynamic conditions, sediment characteristics, and aquaculture methods were recognized as the underlying causes of spatial heterogeneity in the distribution of nitrogen and phosphorous pollutants, the two major controlling factors of habitat degradation in the bay area. In order to achieve the goal of balancing nutrient inputs and outputs in Sansha Bay, we developed a feasible and practical zone restoration strategy for reasonable adjustment and arrangement of aquaculture species and production scale in accordance with varying hydrodynamic conditions and sediment characteristics in six sub-bay areas (sub-systems). The proposed zone restoration strategy lays a solid foundation for habitat restoration and management in Sansha Bay.

  9. Antibodies to bacterial vaccines demonstrating specificity for human choriogonadotropin (hCG) and immunochemical detection of hCG-like factor in subcellular bacterial fractions.

    PubMed Central

    Domingue, G J; Acevedo, H F; Powell, J E; Stevens, V C

    1986-01-01

    Investigations were done to determine whether vaccines prepared with chemically killed Staphylococcus haemolyticus RU1 and Streptococcus bovis AV46 (bacteria that have been demonstrated to express human choriogonadotropin [hCG]-like material on their surface) elicited antibodies in rabbits with specificity for hCG determinants. In addition, the anatomical locus of the hCG-like factor was determined by separation of bacterial subcellular fractions. The results demonstrated that these bacterial vaccines elicited antibodies immunologically similar to those antibodies produced in response to the whole human trophoblastic hormone, a similarity extending even to cross-reactivity with human luteinizing hormone. The bacterial hCG-like material appeared to be localized in the membranes of the cell wall, and most was present in the soluble membranous and cytoplasmic constituents. Its expression in bacteria was a strain characteristic and not a species characteristic. Images PMID:3721581

  10. Sulfasalazine and BAY 11-7082 interfere with the nuclear factor-kappa B and I kappa B kinase pathway to regulate the release of proinflammatory cytokines from human adipose tissue and skeletal muscle in vitro.

    PubMed

    Lappas, Martha; Yee, Kirin; Permezel, Michael; Rice, Gregory E

    2005-03-01

    There is much evidence to indicate a role for adipocytokines in insulin resistance and/or type 2 diabetes mellitus. In experimental models, oral salicylates, through their ability to interfere with the nuclear factor-kappa B (NF-kappa B) transcription pathway, have been demonstrated to reverse insulin resistance. The aim of this study was to investigate whether NF-kappa B regulates the release of adipocytokines in human adipose tissue and skeletal muscle. Human sc adipose tissue and skeletal muscle (obtained from normal pregnant women) were incubated in the absence (control) or presence of two NF-kappa B inhibitors sulfasalazine (1.25, 2.5, and 5 mm) and BAY 11-7082 (25, 50, and 100 microm). After an 18-h incubation, the tissues were collected, and NF-kappa B p65 DNA-binding activity and I kappa B kinase (IKK-beta) and insulin receptor-beta protein expression were assessed by ELISA and Western blotting, respectively. The incubation medium was collected, and the release of TNF-alpha, IL-6, IL-8, resistin, adiponectin, and leptin was quantified by ELISA. Treatment of adipose tissue and skeletal muscle with sulfasalazine and BAY 11-7082 significantly inhibited the release of IL-6, IL-8, and TNF-alpha; NF-kappa B p65 DNA-binding activity; and IKK-beta protein expression (P < 0.05, by Newman-Keuls test). There was no effect of sulfasalazine and BAY 11-7082 on resistin, adiponectin, or leptin release. Both sulfasalazine and BAY 11-7082 increased the adipose tissue and skeletal muscle expression of insulin receptor-beta. The data presented in this study demonstrate that the IKK-beta/NF-kappa B transcription pathway is a key regulator of IL-6, IL-8, and TNF-alpha release from adipose tissue and skeletal muscle. Control of the IKK-beta/NF-kappa B pathway may therefore provide an alternative therapeutic strategy for regulating aberrant cytokine release and thereby alleviating insulin resistance in type 2 diabetes mellitus.

  11. Analysis of Subcellular RNA Fractions Revealed a Transcription-Independent Effect of Tumor Necrosis Factor Alpha on Splicing, Mediated by Spt5.

    PubMed

    Diamant, Gil; Eisenbaum, Tal; Leshkowitz, Dena; Dikstein, Rivka

    2016-05-01

    The proinflammatory cytokine tumor necrosis factor alpha (TNF-α) modulates the expression of many genes, primarily through activation of NF-κB. Here, we examined the global effects of the elongation factor Spt5 on nascent and mature mRNAs of TNF-α-induced cells using chromatin and cytosolic subcellular fractions. We identified several classes of TNF-α-induced genes controlled at the level of transcription, splicing, and chromatin retention. Spt5 was found to facilitate splicing and chromatin release in genes displaying high induction rates. Further analysis revealed striking effects of TNF-α on the splicing of 25% of expressed genes; the vast majority were not transcriptionally induced. Splicing enhancement of noninduced genes by TNF-α was transient and independent of NF-κB. Investigating the underlying basis, we found that Spt5 is required for the splicing facilitation of the noninduced genes. In line with this, Spt5 interacts with Sm core protein splicing factors. Furthermore, following TNF-α treatment, levels of RNA polymerase II (Pol II) but not Spt5 are reduced from the splicing-induced genes, suggesting that these genes become enriched with a Pol II-Spt5 form. Our findings revealed the Pol II-Spt5 complex as a highly competent coordinator of cotranscriptional splicing.

  12. Heavy metals fractionation in Ganga River sediments, India.

    PubMed

    Purushothaman, P; Chakrapani, G J

    2007-09-01

    The Ganga River is the largest river in India which, originates in the Himalayas and along with the Brahmaputra River, another Himalayan river, transports enormous amounts of sediments from the Indian sub-continent to the Bay of Bengal. Because of the important role of river sediments in the biogeochemical cycling of elements, the Ganga river sediments, collected from its origin to the down stretches, were studied in the present context, to assess the heavy metals associated with different chemical fractions of sediments. The fractionation of metals were studied in the sediments using SM&T protocol for the extraction of heavy metals and geo-accumulation index (GAI) (Muller, Schwermetalle in den sedimenten des rheins - Veranderungen seit. Umschau, 79, 778-783, 1979) and Metal Enrichment Factor (MEF) in different fractions were calculated. As with many river systems, residual fractions constitute more than 60% of total metals, except Zn, Cu and Cr. However, the reducible and organic and sulfide components also act as major sinks for metals in the down stretches of the river, which is supported by the high GAI and MEF values. The GAI values range between 4 and 5 and MEF exceed more than 20 for almost all the locations in the downstream locations indicating to the addition of metals through urban and industrial effluents, as compared to the low metals concentrations with less GAI and MEF in the pristine river sediments from the rivers in Himalayas.

  13. Heavy metals fractionation in Ganga River sediments, India.

    PubMed

    Purushothaman, P; Chakrapani, G J

    2007-09-01

    The Ganga River is the largest river in India which, originates in the Himalayas and along with the Brahmaputra River, another Himalayan river, transports enormous amounts of sediments from the Indian sub-continent to the Bay of Bengal. Because of the important role of river sediments in the biogeochemical cycling of elements, the Ganga river sediments, collected from its origin to the down stretches, were studied in the present context, to assess the heavy metals associated with different chemical fractions of sediments. The fractionation of metals were studied in the sediments using SM&T protocol for the extraction of heavy metals and geo-accumulation index (GAI) (Muller, Schwermetalle in den sedimenten des rheins - Veranderungen seit. Umschau, 79, 778-783, 1979) and Metal Enrichment Factor (MEF) in different fractions were calculated. As with many river systems, residual fractions constitute more than 60% of total metals, except Zn, Cu and Cr. However, the reducible and organic and sulfide components also act as major sinks for metals in the down stretches of the river, which is supported by the high GAI and MEF values. The GAI values range between 4 and 5 and MEF exceed more than 20 for almost all the locations in the downstream locations indicating to the addition of metals through urban and industrial effluents, as compared to the low metals concentrations with less GAI and MEF in the pristine river sediments from the rivers in Himalayas. PMID:17295113

  14. Benthic fluxes in San Francisco Bay

    USGS Publications Warehouse

    Hammond, Douglas E.; Fuller, C.; Harmon, D.; Hartman, Blayne; Korosec, M.; Miller, L.G.; Rea, R.; Warren, S.; Berelson, W.; Hager, S.W.

    1985-01-01

    Measurements of benthic fluxes have been made on four occasions between February 1980 and February 1981 at a channel station and a shoal station in South San Francisco Bay, using in situ flux chambers. On each occasion replicate measurements of easily measured substances such as radon, oxygen, ammonia, and silica showed a variability (??1??) of 30% or more over distances of a few meters to tens of meters, presumably due to spatial heterogeneity in the benthic community. Fluxes of radon were greater at the shoal station than at the channel station because of greater macrofaunal irrigation at the former, but showed little seasonal variability at either station. At both stations fluxes of oxygen, carbon dioxide, ammonia, and silica were largest following the spring bloom. Fluxes measured during different seasons ranged over factors of 2-3, 3, 4-5, and 3-10 (respectively), due to variations in phytoplankton productivity and temperature. Fluxes of oxygen and carbon dioxide were greater at the shoal station than at the channel station because the net phytoplankton productivity is greater there and the organic matter produced must be rapidly incorporated in the sediment column. Fluxes of silica were greater at the shoal station, probably because of the greater irrigation rates there. N + N (nitrate + nitrite) fluxes were variable in magnitude and in sign. Phosphate fluxes were too small to measure accurately. Alkalinity fluxes were similar at the two stations and are attributed primarily to carbonate dissolution at the shoal station and to sulfate reduction at the channel station. The estimated average fluxes into South Bay, based on results from these two stations over the course of a year, are (in mmol m-2 d-1): O2 = -27 ?? 6; TCO2 = 23 ?? 6; Alkalinity = 9 ?? 2; N + N = -0.3 ?? 0.5; NH3 = 1.4 ?? 0.2; PO4 = 0.1 ?? 0.4; Si = 5.6 ?? 1.1. These fluxes are comparable in magnitude to those in other temperate estuaries with similar productivity, although the seasonal

  15. Climate and anthropogenic factors influencing an estuarine ecosystem from NW Iberia: new high resolution multiproxy analyses from San Simón Bay (Ría de Vigo)

    NASA Astrophysics Data System (ADS)

    Muñoz Sobrino, Castor; García-Moreiras, Iria; Castro, Yoel; Martínez Carreño, Natalia; de Blas, Esther; Fernandez Rodríguez, Carlos; Judd, Alan; García-Gil, Soledad

    2014-06-01

    Two sedimentary sequences (coastal and subtidal) were studied in San Simón Bay (Ría de Vigo), situated on the Atlantic coast of NW Iberia. The coastal record is a shallowing upward sequence which evidences a locally-developed low marsh, situated below the current beach, and dated at the second half of the 4th century. During the following decades this low marsh was progressively replaced by an alder swamp which formed on it. This suggests an apparent stabilisation or slow-down of the relative sea-level (RSL), in this site, at the beginning of the Dark Ages (DA). The subtidal sequence studied reflects the main changes in the landscape, the hydrological conditions, climate and RSL affecting this part of NW Iberia during the last 1250 years. Evidence of changing dinocysts content in the sediment reveals that two centennial or decadal-scale episodes existed of shelf marine waters more intensely penetrating inside the bay: between the 15th-18th centuries and at ca 1800-1930 AD. Besides, we related different proxies with the occurrence of four main climatic stages, namely the previously described Dark Ages (DA, ca 350-750 AD), the Mediaeval Climatic Anomaly (MCA, ca 750-1100 AD) and the Little Ice Age (LIA. ca 1500-1930 AD); in addition we propose a regional MCA/LIA transition (ca 1100-1500 AD) that it has not been previously described. Our environmental characterization indicates a persistent North Atlantic Oscillation (NAO) negative mode domain in Ría de Vigo during the MCA, but this became weaker during the LIA and, probably, also during the earlier DA. NAO mode become more irregular during the MCA/LIA transition, generally persisting in dominant negative mode except for a phase of minor upwelling intensification, at ca 1150-1350 AD, which mainly affected the external parts of the ria. We postulate that an almost simultaneous phase (ca 1100-1350 AD) of stronger continental contribution in the sediments may be related to increasing storm intensities, probably linked

  16. Florida Bay: A history of recent ecological changes

    USGS Publications Warehouse

    Fourqurean, J.W.; Robblee, M.B.

    1999-01-01

    Florida Bay is a unique subtropical estuary at the southern tip of the Florida peninsula. Recent ecological changes (seagrass die-off, algal blooms, increased turbidity) to the Florida Bay ecosystem have focused the attention of the public, commercial interests, scientists, and resource managers on the factors influencing the structure and function of Florida Bay. Restoring Florida Bay to some historic condition is the goal of resource managers, but what is not clear is what an anthropogenically-unaltered Florida Bay would look like. While there is general consensus that human activities have contributed to the changes occurring in the Florida Bay ecosystem, a high degree of natural system variability has made elucidation of the links between human activity and Florida Bay dynamics difficult. Paleoecological analyses, examination of long-term datasets, and directed measurements of aspects of the ecology of Florida Bay all contribute to our understanding of the behavior of the bay, and allow quantification of the magnitude of the recent ecological changes with respect to historical variability of the system.

  17. Measurement of the D0→π-e+νe differential decay branching fraction as a function of q2 and study of form factor parametrizations

    NASA Astrophysics Data System (ADS)

    Lees, J. P.; Poireau, V.; Tisserand, V.; Grauges, E.; Palano, A.; Eigen, G.; Stugu, B.; Brown, D. N.; Kerth, L. T.; Kolomensky, Yu. G.; Lee, M. J.; Lynch, G.; Koch, H.; Schroeder, T.; Hearty, C.; Mattison, T. S.; McKenna, J. A.; So, R. Y.; Khan, A.; Blinov, V. E.; Buzykaev, A. R.; Druzhinin, V. P.; Golubev, V. B.; Kravchenko, E. A.; Onuchin, A. P.; Serednyakov, S. I.; Skovpen, Yu. I.; Solodov, E. P.; Todyshev, K. Yu.; Lankford, A. J.; Mandelkern, M.; Dey, B.; Gary, J. W.; Long, O.; Campagnari, C.; Franco Sevilla, M.; Hong, T. M.; Kovalskyi, D.; Richman, J. D.; West, C. A.; Eisner, A. M.; Lockman, W. S.; Panduro Vazquez, W.; Schumm, B. A.; Seiden, A.; Chao, D. S.; Cheng, C. H.; Echenard, B.; Flood, K. T.; Hitlin, D. G.; Miyashita, T. S.; Ongmongkolkul, P.; Porter, F. C.; Röhrken, M.; Andreassen, R.; Huard, Z.; Meadows, B. T.; Pushpawela, B. G.; Sokoloff, M. D.; Sun, L.; Bloom, P. C.; Ford, W. T.; Gaz, A.; Smith, J. G.; Wagner, S. R.; Ayad, R.; Toki, W. H.; Spaan, B.; Bernard, D.; Verderi, M.; Playfer, S.; Bettoni, D.; Bozzi, C.; Calabrese, R.; Cibinetto, G.; Fioravanti, E.; Garzia, I.; Luppi, E.; Piemontese, L.; Santoro, V.; Calcaterra, A.; de Sangro, R.; Finocchiaro, G.; Martellotti, S.; Patteri, P.; Peruzzi, I. M.; Piccolo, M.; Rama, M.; Zallo, A.; Contri, R.; Lo Vetere, M.; Monge, M. R.; Passaggio, S.; Patrignani, C.; Robutti, E.; Bhuyan, B.; Prasad, V.; Adametz, A.; Uwer, U.; Lacker, H. M.; Dauncey, P. D.; Mallik, U.; Chen, C.; Cochran, J.; Prell, S.; Ahmed, H.; Gritsan, A. V.; Arnaud, N.; Davier, M.; Derkach, D.; Grosdidier, G.; Le Diberder, F.; Lutz, A. M.; Malaescu, B.; Roudeau, P.; Stocchi, A.; Wormser, G.; Lange, D. J.; Wright, D. M.; Coleman, J. P.; Fry, J. R.; Gabathuler, E.; Hutchcroft, D. E.; Payne, D. J.; Touramanis, C.; Bevan, A. J.; di Lodovico, F.; Sacco, R.; Cowan, G.; Bougher, J.; Brown, D. N.; Davis, C. L.; Denig, A. G.; Fritsch, M.; Gradl, W.; Griessinger, K.; Hafner, A.; Schubert, K. R.; Barlow, R. J.; Lafferty, G. D.; Cenci, R.; Hamilton, B.; Jawahery, A.; Roberts, D. A.; Cowan, R.; Sciolla, G.; Cheaib, R.; Patel, P. M.; Robertson, S. H.; Neri, N.; Palombo, F.; Cremaldi, L.; Godang, R.; Sonnek, P.; Summers, D. J.; Simard, M.; Taras, P.; de Nardo, G.; Onorato, G.; Sciacca, C.; Martinelli, M.; Raven, G.; Jessop, C. P.; Losecco, J. M.; Honscheid, K.; Kass, R.; Feltresi, E.; Margoni, M.; Morandin, M.; Posocco, M.; Rotondo, M.; Simi, G.; Simonetto, F.; Stroili, R.; Akar, S.; Ben-Haim, E.; Bomben, M.; Bonneaud, G. R.; Briand, H.; Calderini, G.; Chauveau, J.; Leruste, Ph.; Marchiori, G.; Ocariz, J.; Biasini, M.; Manoni, E.; Pacetti, S.; Rossi, A.; Angelini, C.; Batignani, G.; Bettarini, S.; Carpinelli, M.; Casarosa, G.; Cervelli, A.; Chrzaszcz, M.; Forti, F.; Giorgi, M. A.; Lusiani, A.; Oberhof, B.; Paoloni, E.; Perez, A.; Rizzo, G.; Walsh, J. J.; Lopes Pegna, D.; Olsen, J.; Smith, A. J. S.; Faccini, R.; Ferrarotto, F.; Ferroni, F.; Gaspero, M.; Li Gioi, L.; Pilloni, A.; Piredda, G.; Bünger, C.; Dittrich, S.; Grünberg, O.; Hess, M.; Leddig, T.; Voß, C.; Waldi, R.; Adye, T.; Olaiya, E. O.; Wilson, F. F.; Emery, S.; Vasseur, G.; Anulli, F.; Aston, D.; Bard, D. J.; Cartaro, C.; Convery, M. R.; Dorfan, J.; Dubois-Felsmann, G. P.; Dunwoodie, W.; Ebert, M.; Field, R. C.; Fulsom, B. G.; Graham, M. T.; Hast, C.; Innes, W. R.; Kim, P.; Leith, D. W. G. S.; Lewis, P.; Lindemann, D.; Luitz, S.; Luth, V.; Lynch, H. L.; Macfarlane, D. B.; Muller, D. R.; Neal, H.; Perl, M.; Pulliam, T.; Ratcliff, B. N.; Roodman, A.; Salnikov, A. A.; Schindler, R. H.; Snyder, A.; Su, D.; Sullivan, M. K.; Va'Vra, J.; Wisniewski, W. J.; Wulsin, H. W.; Purohit, M. V.; White, R. M.; Wilson, J. R.; Randle-Conde, A.; Sekula, S. J.; Bellis, M.; Burchat, P. R.; Puccio, E. M. T.; Alam, M. S.; Ernst, J. A.; Gorodeisky, R.; Guttman, N.; Peimer, D. R.; Soffer, A.; Spanier, S. M.; Ritchie, J. L.; Ruland, A. M.; Schwitters, R. F.; Wray, B. C.; Izen, J. M.; Lou, X. C.; Bianchi, F.; de Mori, F.; Filippi, A.; Gamba, D.; Lanceri, L.; Vitale, L.; Martinez-Vidal, F.; Oyanguren, A.; Villanueva-Perez, P.; Albert, J.; Banerjee, Sw.; Beaulieu, A.; Bernlochner, F. U.; Choi, H. H. F.; King, G. J.; Kowalewski, R.; Lewczuk, M. J.; Lueck, T.; Nugent, I. M.; Roney, J. M.; Sobie, R. J.; Tasneem, N.; Gershon, T. J.; Harrison, P. F.; Latham, T. E.; Band, H. R.; Dasu, S.; Pan, Y.; Prepost, R.; Wu, S. L.; Babar Collaboration

    2015-03-01

    Based on a sample of 500 million e+e-→c c ¯ events recorded by the BABAR detector at c.m. energies of close to 10.6 GeV, we report on a study of the decay D0→π-e+νe. We measure the ratio of branching fractions, RD=B (D0→π-e+νe)/B (D0→K-π+)=0.0713 ±0.001 7stat±0.002 4syst , and use the present world average for B (D0→K-π+) to obtain B (D0→π-e+νe)=(2.770 ±0.06 8stat±0.09 2syst±0.03 7ext)×1 0-3 where the third error accounts for the uncertainty on the branching fraction for the reference channel. The measured dependence of the differential branching fraction on q2, the four-momentum transfer squared between the D and the π meson, is compared to various theoretical predictions for the hadronic form factor, f+,Dπ(q2), and the normalization |Vc d| ×f+,Dπ(q2=0 )=0.1374 ±0.003 8stat±0.002 2syst±0.000 9ext . is extracted from a fit to data. Using the most recent LQCD prediction of f+,Dπ(q2=0 )=0.666 ±0.029 , we obtain |Vc d| =0.206 ±0.00 7exp±0.00 9LQCD . Assuming, instead, |Vc d| =|Vu s| =0.2252 ±0.0009 , we obtain f+,Dπ(q2=0 )=0.610 ±0.02 0exp±0.00 5ext . The q2 dependence of f+,Dπ(q2) is compared to a variety of multipole parametrizations. This information is applied to B0→π-e+νe decays and, combined with an earlier B0→π-e+νe measurement by BABAR, is used to derive estimates of |Vu b|.

  18. Seasonal Variation of Unattached fraction and Equilibrium factor of 222Rn and 220Rn using DRPS/DTPS and Pin -hole cup dosimeters.

    NASA Astrophysics Data System (ADS)

    Bangotra, P.; Mehra, R.; Jakhu, R.

    2015-12-01

    222Rn (Radon), 220Rn (Thoron) and their progenies are naturally occurring radionuclides in environment and responsible for the radiological dose to population. The 222Rn, 220Rn concentration and their separate attached and unattached progeny concentration (season-wise) in units of EEC have been measured in the dwellings of Muktsar and Mansa districts of Punjab (India), using Pin- hole cup dosimeters and deposition based progeny sensors (DTPS/DRPS). The indoor 222Rn concentration was maximum in the rainy season (60 Bqm-3) while 220Rn concentration was maximum in winter season (57 Bqm-3). However EEC of 222Rn and 220Rn has distinct seasonal demeanour than their parent nuclides. The unattached EEC for both 222Rn and 220Rn (EERCU and EETCU) were higher in summer and rainy season as compared to winter season. The equilibrium factor ( for 222Rn and for 220Rn) and unattached fraction ( for 222Rn and for 220Rn) has been calculated separately. The (0.44 ± 0.04) in the studied area was similar to 0.4 that proposed by UNSCEAR and for (0.05 ± 0.01) it was greater than specified value 0.02 by UNSCEAR. The was higher in summer season as compared to rainy and winter season. Due to very smaller value of , a proper relation has not been observed seasonally. The unattached fraction in environment may increase the risk of radiological exposure and absorbed at faster rate into blood then the attached 222Rn and 220Rn progeny. The overall arithmetic mean (rainy, winter and summer seasons) of and were 0.09 ± 0.02 and 0.10 ± 0.03 respectively. The and were lower in winter season as compared to rainy and summer seasons due to higher value of attached EEC present in winter season. A positive and significant correlation (0.56) has been observed between the and aerosol concentration (Z (cm-3)).

  19. Theoretical calculation of oxygen equilibrium isotope fractionation factors involving various NOy molecules, radOH, and H2O and its implications for isotope variations in atmospheric nitrate

    NASA Astrophysics Data System (ADS)

    Walters, Wendell W.; Michalski, Greg

    2016-10-01

    The oxygen stable isotope composition (δ18O) of nitrogen oxides [NOx = nitric oxide (NO) + nitrogen dioxide (NO2)] and their oxidation products (NOy = NOx + nitric acid (HNO3) + particulate nitrate (p-NO3-) + nitrate radical (NO3) + dinitrogen pentoxide (N2O5) + nitrous acid (HONO) + …) have been shown to be a useful tool for inferring the proportion of NOx that is oxidized by ozone (O3). However, isotopic fractionation processes may have an influence on δ18O of various NOy molecules and other atmospheric O-bearing molecules pertinent to NOx oxidation chemistry. Here we have evaluated the impacts of O isotopic exchange involving NOy molecules, the hydroxyl radical (radOH), and water (H2O) using reduced partition function ratios (xβ) calculated by hybrid density functional theory. Assuming atmospheric isotopic equilibrium is achieved between NO and NO2 during the daytime, and NO2, NO3, and N2O5 during the nighttime, δ18O-δ15N compositions were predicted for the major atmospheric nitrate formation pathways using our calculated exchange fractionation factors and isotopic mass-balance. Our equilibrium model predicts that various atmospheric nitrate formation pathways, including NO2 + radOH → HNO3, N2O5 + H2O + surface → 2HNO3, and NO3 + R → HNO3 + Rrad will yield distinctive δ18O-δ15N compositions. Our calculated δ18O-δ15N compositions match well with previous atmospheric nitrate measurements, and will potentially help better understand the role oxidation chemistry plays on the N and O isotopic composition of atmospheric nitrate.

  20. Low-molecular-weight fractions of Alcalase hydrolyzed egg ovomucin extract exert anti-inflammatory activity in human dermal fibroblasts through the inhibition of tumor necrosis factor-mediated nuclear factor κB pathway.

    PubMed

    Sun, Xiaohong; Chakrabarti, Subhadeep; Fang, Jun; Yin, Yulong; Wu, Jianping

    2016-07-01

    Ovomucin is a mucin-like protein from egg white with a variety of biological functions. We hypothesized that ovomucin-derived peptides might exert anti-inflammatory activity. The specific objectives were to test the anti-inflammatory activities of different ovomucin hydrolysates and its various fractions in human dermal fibroblasts, and to understand the possible molecular mechanisms. Three ovomucin hydrolysates were prepared and desalted; only the desalted Alcalase hydrolysate showed anti-inflammatory activity. Desalting of ovomucin hydrolysate enriched the proportion of low-molecular-weight (MW) peptides. Indeed, ultrafiltration of this hydrolysate displayed comparable anti-inflammatory activity in dermal fibroblasts, indicating the responsible role of low-MW bioactive peptides in exerting the beneficial biological function. The anti-inflammatory activity of low-MW peptides was regulated through the inhibition of tumor necrosis factor-mediated nuclear factor κ-light-chain-enhancer of activated B cells activity. Our study demonstrated that both peptide composition and MW distribution play important roles in anti-inflammatory activity. The low-MW fractions prepared from ovomucin Alcalase hydrolysate may have potential applications for maintenance of dermal health and treatment of skin diseases. PMID:27333955

  1. The contribution of heavy metal pollution derived from highway runoff to Guanabara Bay sediments--Rio de Janeiro/Brazil.

    PubMed

    Pereira, Edisio; Baptista-Neto, José A; Smith, Bernard J; McAllister, John J

    2007-12-01

    In this study, geochemical and particle size analyses of thirty-four street sediment samples collected from an urban environment around Guanabara Bay, shows highway run-off to be a potential source of heavy metals for the pollution of near-shore sedimentary deposits. Concentrations of Fe, Mn, Zn, Cu, Pb, Cr and Ni were found to be higher in these sediments when compared to concentrations found in samples from the natural environment, where an Enrichment Factor (EF) index was used to distinguish between natural and anthropogenic sources. Particle size analysis shows these sediments to be predominantly composed of sand and no distribution pattern was observed between the sand, silt and clay fractions. High levels of organic matter and heavy metals would indicate that these street run-off materials are a potential source of pollution for the near-shore sediments of Guanabara Bay.

  2. Towards an improved inventory of N2O from agriculture: Model evaluation of N2O emission factors and N fraction leached from different sources in UK agriculture

    NASA Astrophysics Data System (ADS)

    Cardenas, L. M.; Gooday, R.; Brown, L.; Scholefield, D.; Cuttle, S.; Gilhespy, S.; Matthews, R.; Misselbrook, T.; Wang, J.; Li, C.; Hughes, G.; Lord, E.

    2013-11-01

    National and international requirements for greenhouse gas emissions demand the development of more accurate inventories and mitigation options that are effective in reducing emissions. The UK government set a target for the year 2050 of an 80% reduction in greenhouse gas emissions compared to the 1990 baseline. Estimate of UK national emissions is based on IPCC default methodology and as agriculture contributes about 7% of total GHG emissions of which 60% is N2O, efforts to improve the inventory and assess mitigation options are needed. Models can be used to derive N2O emission factors providing high spatial and temporal resolution. In this study, we used two models, the UK-DNDC, a mechanistic model to estimate N2O emissions from soils and the NITCAT model to estimate the fraction of N applied that is leached and causes indirect emissions, both at county level for the UK. Four mitigation options were assessed and the results showed there were differences in the emission factors according to location. Average emission factors for N2O from soils for inorganic fertiliser did not differ from the IPCC default value but for organic fertiliser the model gave much lower values. FracLEACH for arable land was higher than that for grassland (UK averages of 0.28 and 0.09 respectively) and the national average value was 0.18. For N2O, the most effective mitigation measure was adjusting fertiliser rates to account for crop available manure N. For N leaching, the most effective measure was implementation of a manure closed period.

  3. A mixed carbonate/clastic example in a restricted bay in a temperate carbonate shelf (Cala Fornells, northern Minorca Spain)

    SciTech Connect

    Fornos, J.J.; Forteza, V.; Jaume, C.; Martinez-Taberner, A. )

    1990-05-01

    Cala Fornells is a restricted bay located in the northern section of the island Minorca. Cala Fornells has a surface area of 4 km{sup 2} and a maximum depth of 25 m at the mouth, which connects with the northern Minorca platform. Due to ephemeral streams with very fine textural inflow, the sedimentary facies present in the floor of the bay are primarily controlled by the bioclastic carbonate ecosystem production and the terrigenous input. The distribution of the facies is related to three major factors: (1) bathymetry, which controls the ecosystem distribution (Cymodocea nodosa-Caulerpa prolifera, Posidonia oceanica, and maeerl communities, from shallowest to deepest); (2) hydrodynamic conditions due to northern winds (locally called Tramuntana), which control the grain size distribution; and (3) local ephemeral streams, which control the terrigenous input. In the coarser fractions of the sediment (gravel and sand), the main component in the deepest zones are skeletal fragments of red algae. The shallowest zones contain fragments of the green alga Halimeda tuna, which may represent up to 50% of the total bioclastic fraction. The terrigenous components are mostly shales and only locally do they find a sand fragment of limestone and quartz grains. The organic matter content is very high (over 6% in the finest fractions), whereas in the more hydrodynamic and deeper facies (25 m) where the bioclastic fractions are predominant, the organic carbon content is below 0.5%.

  4. Chromatographic methods of fractionation.

    PubMed

    Friesen, A D

    1987-01-01

    Chromatography's functional versatility, separation efficiency, gentle non-denaturing separating process and ease of automation and scale-up make it attractive for industrial scale protein purification. The Winnipeg Rh Institute's new Plasma Fractionation facility is an example of the use of chromatography for the large scale purification of plasma protein fractions. The fractionation facility has a capacity to process 800 litres of plasma per batch into blood clotting factor VIII and IX, albumin and intravenous immune serum globulin (i.v. ISG). Albumin and i.v. ISG are purified using ion exchange columns of DEAE-Sepharose (230 litre size), DEAE-Biogel (150 litre size) and CM-Sepharose (150 litre size). The chromatographic process is automated using a Modicon 584 Programmable Logic Controller to regulate valves, pumps and sensors which control plasma flow during fractionation. The stainless steel tanks and piping are automatically cleaned-in-place. The high degree of automation and cleaning provides efficient operation and sanitary processing. Chromatographic methods (DEAE-Sepharose and metal chelation) are also being used at the pilot scale to purify the human blood products superoxide dismutase and hemoglobin from outdated red blood cells. Characterization of the protein fractions produced by chromatography has shown them to be of equal or higher quality than fractions produced by other techniques.

  5. Mulberry leaf aqueous fractions inhibit TNF-alpha-induced nuclear factor kappaB (NF-kappaB) activation and lectin-like oxidized LDL receptor-1 (LOX-1) expression in vascular endothelial cells.

    PubMed

    Shibata, Yusuke; Kume, Noriaki; Arai, Hidenori; Hayashida, Kazutaka; Inui-Hayashida, Atsuko; Minami, Manabu; Mukai, Eri; Toyohara, Masako; Harauma, Akiko; Murayama, Toshinori; Kita, Toru; Hara, Saburo; Kamei, Kaeko; Yokode, Masayuki

    2007-07-01

    Mulberry (Morus Alba L., family Moraceae) leaf extracts have various biological effects including inhibition of oxidative modification of low-density lipoprotein (LDL), which is the major cause of atherosclerosis. Endothelial dysfunction elicited by oxidized LDL (Ox-LDL) has been implicated in atherogenesis. Lectin-like Ox-LDL receptor-1 (LOX-1), a cell-surface receptor for atherogenic Ox-LDL, appears to mediate Ox-LDL-induced inflammation, which may be crucial in atherogenesis. Previous studies revealed that expression of LOX-1 is highly inducible by proinflammatory stimuli, including tumor necrosis factor-alpha (TNF-alpha), lipopolysaccharide (LPS), and transforming growth factor-beta (TGF-beta). Therefore, we examined whether mulberry leaf aqueous fractions inhibit LOX-1 expression induced by proinflammatory stimuli. Pretreatment of cultured bovine aortic endothelial cells (BAECs) with mulberry leaf aqueous fractions inhibited TNF-alpha- and LPS-induced expression of LOX-1 at both protein and mRNA levels in a time- and concentration-dependent manner. In contrast, mulberry leaf aqueous fractions did not affect TGF-beta-induced LOX-1 expression. Furthermore, mulberry leaf aqueous fractions inhibited TNF-alpha-induced activation of nuclear factor-kappaB (NF-kappaB) and phosphorylation of inhibitory factor of NF-kappaB-alpha (IkappaB-alpha) in a time- and concentration-dependent fashion. Thus, mulberry leaf aqueous fractions suppress TNF-alpha- and LPS-induced LOX-1 gene expression, by inhibiting NF-kappaB activation.

  6. Intracellular Cadmium Isotope Fractionation

    NASA Astrophysics Data System (ADS)

    Horner, T. J.; Lee, R. B.; Henderson, G. M.; Rickaby, R. E.

    2011-12-01

    Recent stable isotope studies into the biological utilization of transition metals (e.g. Cu, Fe, Zn, Cd) suggest several stepwise cellular processes can fractionate isotopes in both culture and nature. However, the determination of fractionation factors is often unsatisfactory, as significant variability can exist - even between different organisms with the same cellular functions. Thus, it has not been possible to adequately understand the source and mechanisms of metal isotopic fractionation. In order to address this problem, we investigated the biological fractionation of Cd isotopes within genetically-modified bacteria (E. coli). There is currently only one known biological use or requirement of Cd, a Cd/Zn carbonic anhydrase (CdCA, from the marine diatom T. weissfloggii), which we introduce into the E. coli genome. We have also developed a cleaning procedure that allows for the treating of bacteria so as to study the isotopic composition of different cellular components. We find that whole cells always exhibit a preference for uptake of the lighter isotopes of Cd. Notably, whole cells appear to have a similar Cd isotopic composition regardless of the expression of CdCA within the E. coli. However, isotopic fractionation can occur within the genetically modified E. coli during Cd use, such that Cd bound in CdCA can display a distinct isotopic composition compared to the cell as a whole. Thus, the externally observed fractionation is independent of the internal uses of Cd, with the largest Cd isotope fractionation occurring during cross-membrane transport. A general implication of these experiments is that trace metal isotopic fractionation most likely reflects metal transport into biological cells (either actively or passively), rather than relating to expression of specific physiological function and genetic expression of different metalloenzymes.

  7. Module bay with directed flow

    DOEpatents

    Torczynski, John R.

    2001-02-27

    A module bay requires less cleanroom airflow. A shaped gas inlet passage can allow cleanroom air into the module bay with flow velocity preferentially directed toward contaminant rich portions of a processing module in the module bay. Preferential gas flow direction can more efficiently purge contaminants from appropriate portions of the module bay, allowing a reduced cleanroom air flow rate for contaminant removal. A shelf extending from an air inlet slit in one wall of a module bay can direct air flowing therethrough toward contaminant-rich portions of the module bay, such as a junction between a lid and base of a processing module.

  8. Chesapeake Bay Watershed - Protecting the Chesapeake Bay and its rivers through science, restoration, and partnership

    USGS Publications Warehouse

    ,

    2012-01-01

    The Chesapeake Bay, the Nation's largest estuary, has been degraded due to the impact of human-population increase, which has doubled since 1950, resulting in degraded water quality, loss of habitat, and declines in populations of biological communities. Since the mid-1980s, the Chesapeake Bay Program (CBP), a multi-agency partnership which includes the Department of Interior (DOI), has worked to restore the Bay ecosystem. The U.S. Geological Survey (USGS) has the critical role of providing unbiased scientific information that is utilized to document and understand ecosystem change to help assess the effectiveness of restoration strategies in the Bay and its watershed. The USGS revised its Chesapeake Bay science plan for 2006-2011 to address the collective needs of the CBP, DOI, and USGS with a mission to provide integrated science for improved understanding and management of the Bay ecosystem. The USGS science themes for this mission are: Causes and consequences of land-use change; Impact of climate change and associated hazards; Factors affecting water quality and quantity; Ability of habitat to support fish and bird populations; and Synthesis and forecasting to improve ecosystem assessment, conservation, and restoration.

  9. 33 CFR 167.102 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. 167.102 Section 167.102 Navigation and....102 In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Narragansett Bay approach. (a)...

  10. 33 CFR 100.124 - Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... South Bay Cross Bay Swim, Great South Bay, New York. 100.124 Section 100.124 Navigation and Navigable... NAVIGABLE WATERS § 100.124 Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York... swimmer or safety craft on the swim event race course bounded by the following points: Starting Point...

  11. 33 CFR 100.124 - Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... South Bay Cross Bay Swim, Great South Bay, New York. 100.124 Section 100.124 Navigation and Navigable... NAVIGABLE WATERS § 100.124 Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York... swimmer or safety craft on the swim event race course bounded by the following points: Starting Point...

  12. 33 CFR 165.1185 - Regulated Navigation Area; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay...

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River, and..., Sacramento River, San Joaquin River, and connecting waters in California. (a) Location. All waters of San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River,...

  13. Use of affinity-directed liquid chromatography-mass spectrometry to map the epitopes of a factor VIII inhibitor antibody fraction

    PubMed Central

    Griffiths, Amy E.; Wang, Wensheng; Hagen, Fred K.; Fay, Philip J.

    2011-01-01

    Summary Background Neutralizing factor (F) VIII antibodies develop in ~30% of individuals with hemophilia A and show specificity to multiple sites in the FVIII protein. Methods Reactive epitopes to an immobilized IgG fraction prepared from a high-titer, FVIII inhibitor plasma were determined following immuno-precipitation (IP) of tryptic and chymotryptic peptides derived from digests of the A1 and A2 subunits of FVIIIa and FVIII light chain. Peptides were detected and identified using highly sensitive liquid chromatography-mass spectrometry (LC-MS). Results Coverage maps of the A1 subunit, A2 subunit and light chain represented 79%, 69% and 90%, respectively, of the protein sequences. Dot blots indicated that the inhibitor IgG reacted with epitopes contained within each subunit of FVIIIa. IP coupled with LC-MS identified 19 peptides representing epitopes from all FVIII A and C domains. The majority of peptides (10) were derived from the A2 domain. Three peptides mapped to the C2 domain, while two mapped to the A1 and A3 domains, and single peptides mapped to the a1 segment and C1 domain. Epitopes were typically defined by peptide sequences of <12 residues. Conclusions IP coupled with LC-MS identified extensive antibody reactivity at high resolution over the entire functional FVIII molecule and yielded sequence lengths of less than 15 residues. A number of the peptides identified mapped to known sequences involved in functionally important protein-protein and protein-membrane interactions. PMID:21668738

  14. Indole-containing fractions of Brassica rapa inhibit inducible nitric oxide synthase and pro-inflammatory cytokine expression by inactivating nuclear factor-κB.

    PubMed

    Shin, Ji-Sun; Yun, Chang Hyeon; Cho, Young-Wuk; Baek, Nam-In; Choi, Myung-Sook; Jeong, Tae-Sook; Chung, Hae-Gon; Lee, Kyung-Tae

    2011-12-01

    In an attempt to identify bioactive natural products with anti-inflammatory activity, we evaluated the anti-inflammatory potential of the indole-containing fraction from the roots of Brassica rapa (IBR) (Family Brassicaceae) and the underlying mechanisms. Initially, we examined the inhibitory effect of IBR on the production of pro-inflammatory mediators in vitro and then evaluated its in vivo anti-inflammatory effects. IBR was found to concentration-dependently reduce the productions of nitric oxide, tumor necrosis factor-α (TNF-α), and interleukin-6 (IL-6) in lipopolysaccharide (LPS)-induced macrophages. Consistent with these findings, IBR suppressed the LPS-induced expressions of inducible nitric oxide synthase (iNOS) at the protein level and of iNOS, TNF-α, and IL-6 at the mRNA level. Furthermore, IBR attenuated LPS-induced DNA-binding activities of nuclear factor-κB (NF-κB), and this was accompanied by a parallel reduction in the degradation and phosphorylation of inhibitory κBα and, consequently, by a reduction in the nuclear translocation of the p65 subunit of NF-κB. In addition, treatment with IBR inhibited carrageenan-induced paw edema in rats and acetic acid-induced writing response in mice. Taken together, our data suggest that the expressional inhibitions of iNOS, TNF-α, and IL-6 caused by an attenuation of NF-κB activation are responsible for the anti-inflammatory and antinociceptive activity of IBR.

  15. Influence of net freshwater supply on salinity in Florida Bay

    USGS Publications Warehouse

    Nuttle, W.K.; Fourqurean, J.W.; Cosby, B.J.; Zieman, J.C.; Robblee, M.B.

    2000-01-01

    An annual water budget for Florida Bay, the large, seasonally hypersaline estuary in the Everglades National Park, was constructed using physically based models and long-term (31 years) data on salinity, hydrology, and climate. Effects of seasonal and interannual variations of the net freshwater supply (runoff plus rainfall minus evaporation) on salinity variation within the bay were also examined. Particular attention was paid to the effects of runoff, which are the focus of ambitious plans to restore and conserve the Florida Bay ecosystem. From 1965 to 1995 the annual runoff from the Everglades into the bay was less than one tenth of the annual direct rainfall onto the bay, while estimated annual evaporation slightly exceeded annual rainfall. The average net freshwater supply to the bay over a year was thus approximately zero, and interannual variations in salinity appeared to be affected primarily by interannual fluctuations in rainfall. At the annual scale, runoff apparently had little effect on the bay as a whole during this period. On a seasonal basis, variations in rainfall, evaporation, and runoff were not in phase, and the net freshwater supply to the bay varied between positive and negative values, contributing to a strong seasonal pattern in salinity, especially in regions of the bay relatively isolated from exchanges with the Gulf of Mexico and Atlantic Ocean. Changes in runoff could have a greater effect on salinity in the bay if the seasonal patterns of rainfall and evaporation and the timing of the runoff are considered. One model was also used to simulate spatial and temporal patterns of salinity responses expected to result from changes in net freshwater supply. Simulations in which runoff was increased by a factor of 2 (but with no change in spatial pattern) indicated that increased runoff will lower salinity values in eastern Florida Bay, increase the variability of salinity in the South Region, but have little effect on salinity in the Central

  16. STOCHASTIC INTEGRATION FOR TEMPERED FRACTIONAL BROWNIAN MOTION.

    PubMed

    Meerschaert, Mark M; Sabzikar, Farzad

    2014-07-01

    Tempered fractional Brownian motion is obtained when the power law kernel in the moving average representation of a fractional Brownian motion is multiplied by an exponential tempering factor. This paper develops the theory of stochastic integrals for tempered fractional Brownian motion. Along the way, we develop some basic results on tempered fractional calculus.

  17. STOCHASTIC INTEGRATION FOR TEMPERED FRACTIONAL BROWNIAN MOTION.

    PubMed

    Meerschaert, Mark M; Sabzikar, Farzad

    2014-07-01

    Tempered fractional Brownian motion is obtained when the power law kernel in the moving average representation of a fractional Brownian motion is multiplied by an exponential tempering factor. This paper develops the theory of stochastic integrals for tempered fractional Brownian motion. Along the way, we develop some basic results on tempered fractional calculus. PMID:24872598

  18. Usefulness of the Hepatocyte Growth Factor as a Predictor of Mortality in Patients Hospitalized With Acute Heart Failure Regardless of Ejection Fraction.

    PubMed

    Pérez-Calvo, Juan-Ignacio; Morales-Rull, José-Luis; Gimeno-Orna, José-Antonio; Lasierra-Díaz, Pilar; Josa-Laorden, Claudia; Puente-Lanzarote, Juan-José; Bettencourt, Paulo; Pascual-Figal, Domingo A

    2016-08-15

    Hepatocyte growth factor (HGF) plays a role in the improvement of cardiac function and remodeling. Their serum levels are strongly related with mortality in chronic systolic heart failure (HF). The aim of this study was to study prognostic value of HGF in acute HF, interaction with ejection fraction, renal function, and natriuretic peptides. We included 373 patients (age 76 ± 10 years, left ventricular ejection fraction [LVEF] 46 ± 14%, 48% men) consecutively admitted for acute HF. Blood samples were obtained at admission. All patients were followed up until death or close of study (>1 year, median 371 days). HGF concentrations were determined using a commercial enzyme-linked immunosorbent assay (human HGF immunoassay). The predictive power of HGF was estimated by Cox regression with calculation of Harrell C-statistic. HGF had a median of 1,942 pg/ml (interquartile rank 1,354). According to HGF quartiles, mortality rates (per 1,000 patients/year) were 98, 183, 375, and 393, respectively (p <0.001). In Cox regression analysis, HGF (hazard ratio1SD = 1.5, 95% confidence interval 1.1 to 2.1, p = 0.002) and N-terminal pro b-type natriuretic peptide (NT-proBNP; hazard ratio1SD = 1.8, 95% confidence interval 1.2 to 2.6, p = 0.002) were independent predictors of mortality. Interaction between HGF and LVEF, origin, and renal function was nonsignificant. The addition of HGF improved the predictive ability of the models (C-statistic 0.768 vs 0.741, p = 0.016). HGF showed a complementary value over NT-proBNP (p = 0.001): mortality rate was 490 with both above the median versus 72 with both below. In conclusion, in patients with acute HF, serum HGF concentrations are elevated and identify patients at higher risk of mortality, regardless of LVEF, ischemic origin, or renal function. HGF had independent and additive information over NT-proBNP. PMID:27338207

  19. Usefulness of the Hepatocyte Growth Factor as a Predictor of Mortality in Patients Hospitalized With Acute Heart Failure Regardless of Ejection Fraction.

    PubMed

    Pérez-Calvo, Juan-Ignacio; Morales-Rull, José-Luis; Gimeno-Orna, José-Antonio; Lasierra-Díaz, Pilar; Josa-Laorden, Claudia; Puente-Lanzarote, Juan-José; Bettencourt, Paulo; Pascual-Figal, Domingo A

    2016-08-15

    Hepatocyte growth factor (HGF) plays a role in the improvement of cardiac function and remodeling. Their serum levels are strongly related with mortality in chronic systolic heart failure (HF). The aim of this study was to study prognostic value of HGF in acute HF, interaction with ejection fraction, renal function, and natriuretic peptides. We included 373 patients (age 76 ± 10 years, left ventricular ejection fraction [LVEF] 46 ± 14%, 48% men) consecutively admitted for acute HF. Blood samples were obtained at admission. All patients were followed up until death or close of study (>1 year, median 371 days). HGF concentrations were determined using a commercial enzyme-linked immunosorbent assay (human HGF immunoassay). The predictive power of HGF was estimated by Cox regression with calculation of Harrell C-statistic. HGF had a median of 1,942 pg/ml (interquartile rank 1,354). According to HGF quartiles, mortality rates (per 1,000 patients/year) were 98, 183, 375, and 393, respectively (p <0.001). In Cox regression analysis, HGF (hazard ratio1SD = 1.5, 95% confidence interval 1.1 to 2.1, p = 0.002) and N-terminal pro b-type natriuretic peptide (NT-proBNP; hazard ratio1SD = 1.8, 95% confidence interval 1.2 to 2.6, p = 0.002) were independent predictors of mortality. Interaction between HGF and LVEF, origin, and renal function was nonsignificant. The addition of HGF improved the predictive ability of the models (C-statistic 0.768 vs 0.741, p = 0.016). HGF showed a complementary value over NT-proBNP (p = 0.001): mortality rate was 490 with both above the median versus 72 with both below. In conclusion, in patients with acute HF, serum HGF concentrations are elevated and identify patients at higher risk of mortality, regardless of LVEF, ischemic origin, or renal function. HGF had independent and additive information over NT-proBNP.

  20. The δ13C evolution of cave drip water along discreet flow paths in a central Texas cave: Quantifying kinetic isotope fractionation factors

    NASA Astrophysics Data System (ADS)

    Mickler, P. J.; Carlson, P. E.; Banner, J.; Breecker, D.; Stern, L. A.; Baseman, A.

    2015-12-01

    Gaps remain in our understanding of in-cave processes that influence cave water chemistry during speleothem formation. Quantifying environmental controls on the isotopic and chemical evolution of karst groundwater would improve the accuracy of speleothem-based paleoclimate reconstructions. In this study, drip water chemical evolution along flow paths was sampled monthly at two locations in Inner Space Cavern, Texas, over a period of 8 months. In each of the two locations, cave water drips off a stalactite, flows along a flowstone and subsequently drips off a lower stalactite, allowing cave water to be sampled at two points, 1-2 meters apart, along each flow path. The chemical and isotopic evolution of drip water along its flow path shows seasonality, where 1) summer months (high cave-air pCO2) have small variations in δ13C values along the flow paths, high and relatively invariant DIC and Ca values,; and 2) winter months (low cave-air pCO2) generally have large increases in DIC δ13C values along the flow paths, lower DIC and Ca values. The magnitude of the increase in DIC δ13C values along the flow paths, <~1‰ to ~4‰, is controlled by the extent of DIC loss to CO2 degassing and calcite precipitation which is controlled by the pCO2 gradient between drip water and cave air. If the DIC loss is less than 15%, then the evolution of the δ13C value of the DIC reservoir can be modelled using a Rayleigh distillation model and equilibrium fractionation factors between (CO2(g)-HCO3-(aq)) and (CaCO3-HCO3-(aq)). As the loss of the DIC reservoir increases above 15% the DIC δ13C values become progressively higher such that the ɛ (CO2(g)-HCO3-(aq)) values needed to model the observed results change from equilibrium values of ~8‰ to non-equilibrium values up to ~25‰. The variance in magnitude of carbon isotope fractionation during CO2 degassing cannot be attributed to changes in temperature, and thus we infer significant kinetic isotope effects at higher rates of DIC

  1. Baseline distribution and sources of linear alkyl benzenes (LABs) in surface sediments from Brunei Bay, Brunei.

    PubMed

    Alkhadher, Sadeq Abullah Abdo; Zakaria, Mohamad Pauzi; Yusoff, Fatimah Md; Kannan, Narayanan; Suratman, Suhaimi; Keshavarzifard, Mehrzad; Magam, Sami Muhsen; Masood, Najat; Vaezzadeh, Vahab; Sani, Muhamad Shirwan Abdullah

    2015-12-15

    Sewage pollution is one of major concerns of coastal and shoreline settlements in Southeast Asia, especially Brunei. The distribution and sources of LABs as sewage molecular markers were evaluated in surface sediments collected from Brunei Bay. The samples were extracted, fractionated and analyzed using gas chromatography- mass spectrometry (GC-MS). LABs concentrations ranged from 7.1 to 41.3 ng g(-1) dry weight (dw) in surficial sediments from Brunei Bay. The study results showed LABs concentrations variably due to the LABs intensity and anthropogenic influence along Brunei Bay in recent years. The ratio of Internal to External isomers (I/E ratio) of LABs in sediment samples from Brunei Bay ranged from 0.56 to 2.17 along Brunei Bay stations, indicating that the study areas were receiving primary and secondary effluents. This is the first study carried out to assess the distribution and sources of LABs in surface sediments from Brunei Bay, Brunei. PMID:26478457

  2. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds.

    PubMed

    Davis, J A; Looker, R E; Yee, D; Marvin-Di Pasquale, M; Grenier, J L; Austin, C M; McKee, L J; Greenfield, B K; Brodberg, R; Blum, J D

    2012-11-01

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  3. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds

    SciTech Connect

    Davis, J.A.; Looker, R.E.; Yee, D.; Marvin-Di Pasquale, M.; Austin, C.M.; McKee, L.J.; Greenfield, B.K.; Brodberg, R.; Blum, J.D.

    2012-11-15

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  4. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds.

    PubMed

    Davis, J A; Looker, R E; Yee, D; Marvin-Di Pasquale, M; Grenier, J L; Austin, C M; McKee, L J; Greenfield, B K; Brodberg, R; Blum, J D

    2012-11-01

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  5. Reducing Methylmercury Accumulation in the Food Webs of San Francisco Bay and Its Local Watersheds

    PubMed Central

    Davis, J.A.; Looker, R.E.; Yee, D.; Marvin-DiPasquale, M.; Grenier, J.L.; Austin, C.M.; McKee, L.J.; Greenfield, B.K.; Brodberg, R.; Blum, J.D.

    2013-01-01

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  6. Organic matter remineralization predominates phosphorus cycling in the mid-Bay sediments in the Chesapeake Bay.

    PubMed

    Joshi, Sunendra R; Kukkadapu, Ravi K; Burdige, David J; Bowden, Mark E; Sparks, Donald L; Jaisi, Deb P

    2015-05-19

    Chesapeake Bay, the largest and most productive estuary in the U.S., suffers from varying degrees of water quality issues fueled by both point and nonpoint nutrient sources. Restoration of the Bay is complicated by the multitude of nutrient sources, their variable inputs, and complex interaction between imported and regenerated nutrients. These complexities not only restrict formulation of effective restoration plans but also open up debates on accountability issues with nutrient loading. A detailed understanding of sediment phosphorus (P) dynamics provides information useful in identifying the exchange of dissolved constituents across the sediment-water interface as well as helps to better constrain the mechanisms and processes controlling the coupling between sediments and the overlying waters. Here we used phosphate oxygen isotope ratios (δ(18)O(P)) in concert with sediment chemistry, X-ray diffraction, and Mössbauer spectroscopy on sediments retrieved from an organic rich, sulfidic site in the mesohaline portion of the mid-Bay to identify sources and pathway of sedimentary P cycling and to infer potential feedbacks on bottom water hypoxia and surface water eutrophication. Authigenic phosphate isotope data suggest that the regeneration of inorganic P from organic matter degradation (remineralization) is the predominant, if not sole, pathway for authigenic P precipitation in the mid-Bay sediments. This indicates that the excess inorganic P generated by remineralization should have overwhelmed any pore water and/or bottom water because only a fraction of this precipitates as authigenic P. This is the first research that identifies the predominance of remineralization pathway and recycling of P within the Chesapeake Bay. Therefore, these results have significant implications on the current understanding of sediment P cycling and P exchange across the sediment-water interface in the Bay, particularly in terms of the sources and pathways of P that sustain hypoxia

  7. Organic matter remineralization predominates phosphorus cycling in the mid-Bay sediments in the Chesapeake Bay.

    PubMed

    Joshi, Sunendra R; Kukkadapu, Ravi K; Burdige, David J; Bowden, Mark E; Sparks, Donald L; Jaisi, Deb P

    2015-05-19

    Chesapeake Bay, the largest and most productive estuary in the U.S., suffers from varying degrees of water quality issues fueled by both point and nonpoint nutrient sources. Restoration of the Bay is complicated by the multitude of nutrient sources, their variable inputs, and complex interaction between imported and regenerated nutrients. These complexities not only restrict formulation of effective restoration plans but also open up debates on accountability issues with nutrient loading. A detailed understanding of sediment phosphorus (P) dynamics provides information useful in identifying the exchange of dissolved constituents across the sediment-water interface as well as helps to better constrain the mechanisms and processes controlling the coupling between sediments and the overlying waters. Here we used phosphate oxygen isotope ratios (δ(18)O(P)) in concert with sediment chemistry, X-ray diffraction, and Mössbauer spectroscopy on sediments retrieved from an organic rich, sulfidic site in the mesohaline portion of the mid-Bay to identify sources and pathway of sedimentary P cycling and to infer potential feedbacks on bottom water hypoxia and surface water eutrophication. Authigenic phosphate isotope data suggest that the regeneration of inorganic P from organic matter degradation (remineralization) is the predominant, if not sole, pathway for authigenic P precipitation in the mid-Bay sediments. This indicates that the excess inorganic P generated by remineralization should have overwhelmed any pore water and/or bottom water because only a fraction of this precipitates as authigenic P. This is the first research that identifies the predominance of remineralization pathway and recycling of P within the Chesapeake Bay. Therefore, these results have significant implications on the current understanding of sediment P cycling and P exchange across the sediment-water interface in the Bay, particularly in terms of the sources and pathways of P that sustain hypoxia

  8. Weapons bay acoustic environment

    NASA Astrophysics Data System (ADS)

    Shaw, L. L.; Shimovetz, R. M.

    1994-09-01

    An aircraft weapons bay exposed to freestream flow experiences an intense aeroacoustic environment in and around the bay. Experience has taught that the intensity of this environment can be severe enough to result in damage to a store, its internal equipment, or the structure of the weapons bay itself. To ensure that stores and sensitive internal equipment can withstand this hazardous environment and successfully complete the mission, they must be qualified to the most severe sound pressure levels anticipated for the mission. If the qualification test levels are too high, the store and its internal equipment will be over designed, resulting in unnecessary costs and possible performance penalties. If the qualification levels are below those experienced in flight, the store or its internal equipment may catastrophically fail during performance of the mission. Thus, it is desirable that the expected levels in weapons bays be accurately predicted. A large number of research efforts have been directed toward understanding flow-induced cavity oscillations. However, the phenomena are still not adequately understood to allow one to predict the fluctuating pressure levels for various configurations and flow conditions. This is especially true at supersonic flow speeds, where only a small amount of data are available. This paper will give a background of flow induced cavity oscillations and discuss predictions, control and suppression, and the future of weapons bay acoustic environments. A large number of research efforts have been directed toward understanding flow-induced cavity oscillations. However, the phenomena are still not adequately understood to allow one to predict the fluctuating pressure levels for various configurations and flow conditions. This is especially true at supersonic flow speeds, where only a small amount of data are available. This paper will give a background of flow induced cavity oscillations and discuss predictions, control and suppression, and

  9. Mobile Bay turbidity study

    NASA Technical Reports Server (NTRS)

    Crozier, G. F.; Schroeder, W. W.

    1978-01-01

    The termination of studies carried on for almost three years in the Mobile Bay area and adjacent continental shelf are reported. The initial results concentrating on the shelf and lower bay were presented in the interim report. The continued scope of work was designed to attempt a refinement of the mathematical model, assess the effectiveness of optical measurement of suspended particulate material and disseminate the acquired information. The optical characteristics of particulate solutions are affected by density gradients within the medium, density of the suspended particles, particle size, particle shape, particle quality, albedo, and the angle of refracted light. Several of these are discussed in detail.

  10. Fractionally charged skyrmions in fractional quantum Hall effect

    NASA Astrophysics Data System (ADS)

    Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

    2015-11-01

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.

  11. Fractionally charged skyrmions in fractional quantum Hall effect.

    PubMed

    Balram, Ajit C; Wurstbauer, U; Wójs, A; Pinczuk, A; Jain, J K

    2015-01-01

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region. PMID:26608906

  12. Fractionally charged skyrmions in fractional quantum Hall effect

    PubMed Central

    Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

    2015-01-01

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region. PMID:26608906

  13. Fractionally charged skyrmions in fractional quantum Hall effect.

    PubMed

    Balram, Ajit C; Wurstbauer, U; Wójs, A; Pinczuk, A; Jain, J K

    2015-11-26

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.

  14. Fractionally charged skyrmions in fractional quantum Hall effect

    SciTech Connect

    Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

    2015-11-26

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.

  15. Salinity pathways between Arabian Sea and Bay of Bengal

    NASA Astrophysics Data System (ADS)

    Krishna Kailasam, Muni

    2016-07-01

    Surface as well as subsurface salinity are highly heterogeneous in the Arabian Sea and the Bay of Bengal. Due to the strong seasonal reversal of currents in the two seas tremendous salt exchange occurred. The present study focuses on the exchange of salt between the Arabian Sea and Bay of Bengal by using remote sensing observations like SMOS and Aquarius. Inflow of high salinity water from the central Arabians Sea into the south Bay of Bengal is significant and occurs during August-September. Freshwater transport out of the Bay of Bengal is southward throughout the year along the along the east coast of the Indian sub-continent. Only a small fraction of low salinity water is advected into the eastern Arabian Sea from the Bay of Bengal. The pathways of salinity between the two seas are also examined using SODA data. It shows that relatively low salinity Bay of Bengal water is transported southward across the equator throughout the year. A considerable southward cross-equatorial exchange of Arabian Sea water occurs during the southwest monsoon season.

  16. Pine Island Bay

    Atmospheric Science Data Center

    2013-04-16

    ... article title:  Birth of a Large Iceberg in Pine Island Bay, Antarctica     View ... iceberg (42 kilometers x 17 kilometers) broke off Pine Island Glacier, West Antarctica (75°S latitude, 102°W longitude) sometime ...

  17. Yaquina Bay Topobathy DEM

    EPA Science Inventory

    The U.S.EPA contracted with the U.S.ACE to obtain intertidal and subtidal bathymetric soundings of Yaquina Bay between Poole Slough and the South Beach Marina in 2002. These data were compiled with U.S.ACE subtidal soundings from 1999, 1998, 2000 and National Ocean Service soundi...

  18. Chesapeake Bay Critters

    ERIC Educational Resources Information Center

    Mackay-Atha, Lynne

    2005-01-01

    When students enter the author's classroom on the first day of school, they are greeted with live crabs scuttling around in large bins. The crabs are her way of grabbing students' attention and launching the unit on the Chesapeake Bay watershed. She chooses to start the year with this unit because, despite the fact that the Potomac River can be…

  19. Tidal resuspension of sediments in northern Chesapeake Bay

    USGS Publications Warehouse

    Sanford, L.P.; Panageotou, W.; Halka, J.P.

    1991-01-01

    Tidal resuspension experiments were carried out on two occasions during the winter of 1988-1989 at a disposal site for hydraulically dredged sediments in northern Chesapeake Bay to determine the influence of tidal resuspension on erosion of recent deposits. The results indicate that normal tidal erosion depths were only a fraction of a millimeter per half tidal cycle and probably did not account for the majority of the apparent sediment loss. Erosion rate was found to be a linear function of the excess of estimated shear stress over a critical value, but both the constant of proportionality (M = 0.5 mg/cm2/h) and the critical shear stress (??c = 0.16 dynes/cm2 were much less than many previously reported results. The most likely explanation for these low values is that the thin layer of surface sediments involved in regular tidal resuspension had only a few hours at most to consolidate between resuspension events. Observed resuspended sediment concentrations (up to 35 mg/l above background levels) were much less than those reported for previous observations of tidal resuspension in the nearby channel, presumably due to greater stratification and lower tidal velocities at the disposal site. Salinity-induced stratification of the water column is estimated to have reduced shear stresses by up to 50% relative to the neutrally stratified case. Regular tidal resuspension of a thin layer of surface sediments is implicated as a potentially important aspect of the typical benthic environment of northern Chesapeake Bay, even if it is not the most important factor in massive sediment erosion and transport. ?? 1991.

  20. Crustal models for the Melville Bay and Northern Baffin Bay

    NASA Astrophysics Data System (ADS)

    Altenbernd, Tabea; Jokat, Wilfried; Heyde, Ingo

    2014-05-01

    The Baffin Bay between Greenland and Baffin Island (Canada) opened during the separation of Greenland and Canada in the Palaeocene and Eocene. The Melville Bay is situated in its northeastern part. The crustal composition of Northern and Southern Baffin Bay has been studied in detail: Southern Baffin Bay is underlain by oceanic crust with volcanic margins, while the margins of northern Baffin Bay are characterized by serpentinized mantle material. In contrast, the nature of crust in the deep, central Baffin Bay and the Melville Bay was still unclear due to a lack of deep seismic sounding lines. In 2010 a joint geophysical experiment in the Greenlandic part of Baffin Bay acquired seismic, magnetic and gravity data. We present three velocity and density models derived from seismic refraction and gravity data. Two of the three profiles are located within the Melville Bay and extend in a SW - NE direction from the deep sea area of central Baffin Bay to the shelf area of the Melville Bay. The third profile crosses the northern profile in the Melville Bay and extends in a N - S direction into the Northern Baffin Bay. The profiles in the Melville Bay can be divided in three crustal sections. The deep-sea area reveals a 3.5 - 7 km thick, 2-layered oceanic crust with increasing thickness towards the shelf and up to 6 km thick sediments. The crust is underlain by serpentinized upper mantle with velocities of 7.6 - 7.8 kms-1. A transition zone, which is affected by volcanism, connects the oceanic crust with stretched continental crust underneath the Melville Bay. Basement highs and deep sediment basins characterize the stretched and rifted continental crust. The Melville Bay Graben, the deepest rift basin in the Melville Bay, contains up to 10 km thick, possibly metamorphosed sediments with unusually high velocities of up to 4.9 kms1. Well-constrained reflections of the crust-mantle boundary can be found in many seismic sections indicating a maximum crustal thickness of ~ 26

  1. Factors controlling the chemical composition of colloidal and dissolved fractions in soil solutions and the mobility of trace elements in soils

    NASA Astrophysics Data System (ADS)

    Gangloff, Sophie; Stille, Peter; Schmitt, Anne-Désirée; Chabaux, François

    2016-09-01

    The objectives of this study were to determine the processes and physico-chemical conditions that affect the composition of the soil solutions of a forest soil and to elucidate their impact on the transport of major and trace elements through the colloidal (0.2 μm to 5 kDa) and dissolved (<5 kDa) fractions in the first meter of soil. All experiments were performed with soil solutions obtained using lysimeter plates situated on an experimental spruce parcel of the Strengbach catchment (Northeastern France). The surface samples filtered at 0.2 μm facilitated the examination of the influence of litter decomposition on the chemical composition of the upper soil solutions. The impact of the soils biogeochemical conditions (pH, moisture, temperature, oxic or anoxic conditions) on litter decomposition was also examined. More particularly, the increase in NH4+ and NO2- compounds in some of the soil solutions points to denitrification processes in an anoxic environment. Thus, under anoxic conditions, the soil solution is enriched in Ca, P, Mn and Zn, whereas under oxic conditions it is enriched in Al and Fe. The physico-chemical conditions are more seasonally dependent in the upper soil horizons than in the deeper ones and have an impact on the variability of the chemical composition of the soil solutions. The colloidal and dissolved fractions of the soil solutions were obtained by tangential flow ultra-filtration. The experimental results reveal that nutrients, such as NO3- and P, are primarily in the dissolved fraction and consequently bioavailable; secondary minerals may be dissolved and/or precipitate in the colloidal fraction, such as pyromorphite (Pb5(PO4)3(OH, Cl, F)). The results further indicate that microbial activity influences the composition of the colloidal and dissolved fractions, and possibly enriches the colloidal fraction in Ca, Mn and P, diminishes the concentrations of Pb, V, Cr and Fe in the dissolved fraction, and changes the structure of organic

  2. Long-term morphologic evolution of the Hangzhou Bay, China

    NASA Astrophysics Data System (ADS)

    Wen, W.; Zhijun, D.; Hualiang, X.

    2013-12-01

    Estuaries are the most productive ecosystems of coastal zones in the world, which are significant to mankind as places of navigation, recreation and commerce as well as extensive and diverse habitats for wildlife. However, most estuary environments in the world had occurred greatly changes in recent decades. These estuaries have suffered from impacts of forcing factors including wave climate, mean sea level change and storm surge, especial to the intensive human activities such as training wall construction, channel dredging, sand mining and dam constructions. Thus, there have been increasing concerns about estuary environment changes under effects of different factors. Riverine loads into the Changjiang Estuary have declined dramatically with the construction of Three Gorges Dam (TGD) in 2003. The morphological evolution of the Hangzhou bay that located the southern proximity of the Yangtze estuary starts to attract increasing attentions due to most material of the Hangzhou bay received from Yangtze estuary. In this paper, historical bathymetric charts were digitized and analyzed within a GIS to provide quantitative estimate of changes in volumes in different regions below 0 m elevation. The results show that Hangzhou bay has experienced a major loss in estuarine volume of about 15% with annual mean sediment deposition rate of 80 million m3/a during the last 75 years. However, there is a large-scale spatial adjustment in Hangzhou bay: Bathymetric changes of the Hangzhou bay can be rapidly shifted within the range of 8-10 classes. Volume of the Jinshanzui upstream of the Hangzhou bay has obviously decreased in the last 75 years, especially during 2003-2008. However, Volume of the southern Hangzhou bay has experienced slowly decrease with minor deposition. The northern Hangzhou bay had largely volume changes with rapidly decrease during 1931-1981, and drastically increase since 2003. Further analysis of the bathymetric data relating to possible factors indicates

  3. Assessment of metal contamination in coastal sediments of the Maluan Bay (China) using geochemical indices and multivariate statistical approaches.

    PubMed

    Wang, Zaosheng; Wang, Yushao; Chen, Liuqin; Yan, Changzhou; Yan, Yijun; Chi, Qiaoqiao

    2015-10-15

    Total concentrations and chemical forms of heavy metals in surface sediments of Maluan Bay were determined and multiple geochemical indices and guidelines were applied to assess potential contamination and environmental risks. Metal concentrations exhibited significant spatial variation and the speciation of Cr was presented dominantly in the residual fraction, while Cd was found mostly in the non-residual fraction and thus of high potential bioavailability. Cluster analysis separated four subgroups of sampling sites with different levels of contamination. Further, a multivariate method offered the specific interpretation of possible contaminant sources and/or pathways. Factor scores characterized the sampling locations and elucidated the pollution status, pointing out the impact of multiple "hidden hotspots" of contaminants and providing further evidence of the existence of clear pollution-risk gradients in lagoon areas. The study supports the integrative approach as powerful tool to diagnose the pollution status scientifically for management decisions in coastal sediment of complex environment.

  4. Bayes and the Law

    PubMed Central

    Fenton, Norman; Neil, Martin; Berger, Daniel

    2016-01-01

    Although the last forty years has seen considerable growth in the use of statistics in legal proceedings, it is primarily classical statistical methods rather than Bayesian methods that have been used. Yet the Bayesian approach avoids many of the problems of classical statistics and is also well suited to a broader range of problems. This paper reviews the potential and actual use of Bayes in the law and explains the main reasons for its lack of impact on legal practice. These include misconceptions by the legal community about Bayes’ theorem, over-reliance on the use of the likelihood ratio and the lack of adoption of modern computational methods. We argue that Bayesian Networks (BNs), which automatically produce the necessary Bayesian calculations, provide an opportunity to address most concerns about using Bayes in the law. PMID:27398389

  5. Chemical profile of Plomin Bay sediments.

    PubMed

    Orescanin, Visnja; Nad, Karlo; Bartolincić, Anamarija; Valković, Vladivoj

    2009-09-01

    Granulometric, chemical, and leaching properties of sediments dredged in the Plomin Bay (Northern Adriatic Sea, Croatia) were investigated in order to asses the risk of remobilisation of heavy metals into the water column. In total 65 samples from 65 sampling sites were taken from different sediment depths within the bay. Analysis of variance confirmed the homogeneity of granulometric and elemental composition of the investigated sediment throughout its volume. Granulometric analysis showed that all samples corresponded to a pelitic fraction (<0.063 mm). Bulk elemental mass fractions in the sediments were similar to literature data on relatively unpolluted areas of the Adriatic Sea. High sedimentation rate caused by constant inflow of material from the Boljuncica River drainage may be responsible for low levels of heavy metals and negligible influence of fly and bottom ash from a nearby disposal site on the chemical composition of the sediments. In contact with sea water only 0.29 mg kg-1 of V, 0.04 mg kg-1 of Cr, 0.07 mg kg-1 of Ni, 0.33 mg kg-1 of Cu, 0.67 mg kg-1 of Zn and 0.06 mg kg-1 of Pb could be remobilised from sediment material into the water column. However, these values increased three to ten times in case of leaching with organic acids.

  6. Nagoya, Ise Bay, Japan

    NASA Technical Reports Server (NTRS)

    1982-01-01

    This view of Nagoya, Ise Bay and nearby Kyoto, on the main island of Honshu, Japan (35.0N, 137.0E) combines in a single photo both the political, cultural and educational centers of early Japan as well as one of the main educational and business centers of modern Japan. Besides being a business, cultural and educational center, Nagoya is near the geographic center of the Japanese home islands.

  7. Bed composition generation for morphodynamic modeling: Case study of San Pablo Bay in California, USA

    USGS Publications Warehouse

    van der Wegen, M.; Dastgheib, A.; Jaffe, B.E.; Roelvink, D.

    2011-01-01

    Applications of process-based morphodynamic models are often constrained by limited availability of data on bed composition, which may have a considerable impact on the modeled morphodynamic development. One may even distinguish a period of "morphodynamic spin-up" in which the model generates the bed level according to some ill-defined initial bed composition rather than describing the realistic behavior of the system. The present paper proposes a methodology to generate bed composition of multiple sand and/or mud fractions that can act as the initial condition for the process-based numerical model Delft3D. The bed composition generation (BCG) run does not include bed level changes, but does permit the redistribution of multiple sediment fractions over the modeled domain. The model applies the concept of an active layer that may differ in sediment composition above an underlayer with fixed composition. In the case of a BCG run, the bed level is kept constant, whereas the bed composition can change. The approach is applied to San Pablo Bay in California, USA. Model results show that the BCG run reallocates sand and mud fractions over the model domain. Initially, a major sediment reallocation takes place, but development rates decrease in the longer term. Runs that take the outcome of a BCG run as a starting point lead to more gradual morphodynamic development. Sensitivity analysis shows the impact of variations in the morphological factor, the active layer thickness, and wind waves. An important but difficult to characterize criterion for a successful application of a BCG run is that it should not lead to a bed composition that fixes the bed so that it dominates the "natural" morphodynamic development of the system. Future research will focus on a decadal morphodynamic hindcast and comparison with measured bathymetries in San Pablo Bay so that the proposed methodology can be tested and optimized. ?? 2010 The Author(s).

  8. USGS Tampa Bay Pilot Study

    USGS Publications Warehouse

    Yates, K.K.; Cronin, T. M.; Crane, M.; Hansen, M.; Nayeghandi, A.; Swarzenski, P.; Edgar, T.; Brooks, G.R.; Suthard, B.; Hine, A.; Locker, S.; Willard, D.A.; Hastings, D.; Flower, B.; Hollander, D.; Larson, R.A.; Smith, K.

    2007-01-01

    Providing a web-based digital information management system of information for scientists and the public, including a system that supports the work of those officials who must make decisions that affect the state of the bay. The Tampa Bay Study is in its sixth year and will continue through September 2007. This paper presents a non-inclusive summary of key findings associated with the six primary project components listed above. Component 4 (above) is described in detail in the following chapter 13. More information on the Tampa Bay Study is available from our on-line digital information system for the Tampa Bay Study at http://gulfsci.usgs.gov.

  9. Organic Matter Remineralization Predominates Phosphorus Cycling in the Mid-Bay Sediments in the Chesapeake Bay

    SciTech Connect

    Sunendra, Joshi R.; Kukkadapu, Ravi K.; Burdige, David J.; Bowden, Mark E.; Sparks, Donald L.; Jaisi, Deb P.

    2015-05-19

    The Chesapeake Bay, the largest and most productive estuary in the US, suffers from varying degrees of water quality issues fueled by both point and non–point source nutrient sources. Restoration of the bay is complicated by the multitude of nutrient sources, their variable inputs and hydrological conditions, and complex interacting factors including climate forcing. These complexities not only restrict formulation of effective restoration plans but also open up debates on accountability issues with nutrient loading. A detailed understanding of sediment phosphorus (P) dynamics enables one to identify the exchange of dissolved constituents across the sediment- water interface and aid to better constrain mechanisms and processes controlling the coupling between the sediments and the overlying waters. Here we used phosphate oxygen isotope ratios (δ18Op) in concert with sediment chemistry, XRD, and Mössbauer spectroscopy on the sediment retrieved from an organic rich, sulfidic site in the meso-haline portion of the mid-bay to identify sources and pathway of sedimentary P cycling and to infer potential feedback effect on bottom water hypoxia and surface water eutrophication. Isotope data indicate that the regeneration of inorganic P from organic matter degradation (remineralization) is the predominant, if not sole, pathway for authigenic P precipitation in the mid-bay sediments. We interpret that the excess inorganic P generated by remineralization should have overwhelmed any bottom-water and/or pore-water P derived from other sources or biogeochemical processes and exceeded saturation with respect to authigenic P precipitation. It is the first research that identifies the predominance of remineralization pathway against remobilization (coupled Fe-P cycling) pathway in the Chesapeake Bay. Therefore, these results are expected to have significant implications for the current understanding of P cycling and benthic-pelagic coupling in the bay, particularly on the

  10. Variation of phytoplankton biomass and primary production in Daya Bay during spring and summer.

    PubMed

    Song, Xingyu; Huang, Liangmin; Zhang, Jianlin; Huang, Xiaoping; Zhang, Junbin; Yin, Jianqiang; Tan, Yehui; Liu, Sheng

    2004-12-01

    Environmental factors, phytoplankton biomass (Chl a) and primary production of two water areas in Daya Bay (Dapeng'ao Bay and Aotou Bay) were investigated during the transition period from spring to summer. Chl a ranged from 3.20 to 13.62 and 13.43 to 26.49 mg m(-3) in Dapeng'ao Bay and Aotou Bay respectively, if data obtained during red tides are excluded. Primary production varied between 239.7 and 1001.4 mg Cm(-2) d(-1) in Dapeng'ao Bay. The regional distribution of Chl a and primary production were mostly consistent from spring to summer in both bays. Seasonal transition characters have been found in Daya Bay from spring to summer, including high values of DO, nitrate and silicate. Size structures of phytoplankton and its primary production do not change very much from spring to summer, with micro-phytoplankton dominating and contributing about 50% of the whole. In Daya Bay, phytoplankton is limited by nitrogen in spring, and by phosphate in summer. Artificial impacts are evident from high temperature effluent from nuclear power stations, aquaculture and sewage. During the investigation, a red tide occurred in Aotou Bay, with a maximum Chl a of 103.23 mgm(-3) at surface and primary production of 2721.9 mg Cm(-2) d(-1) in the red tide center. Raised water temperature and nutrient supply from land-sources help to stimulate annual red tides.

  11. Assessment for water quality by artificial neural network in Daya Bay, South China Sea.

    PubMed

    Wu, Mei-Lin; Wang, You-Shao; Gu, Ji-Dong

    2015-10-01

    In this study, artificial neural network such as a self-organizing map (SOM) was used to assess for the effects caused by climate change and human activities on the water quality in Daya Bay, South China Sea. SOM has identified the anthropogenic effects and seasonal characters of water quality. SOM grouped the four seasons as four groups (winter, spring, summer and autumn). The Southeast Asian monsoons, northeasterly from October to the next April and southwesterly from May to September have also an important influence on the water quality in Daya Bay. Spatial pattern is mainly related to anthropogenic activities and hydrodynamics conditions. In spatial characteristics, the water quality in Daya Bay was divided into two groups by chemometrics. The monitoring stations (S3, S8, S10 and S11) were in these area (Dapeng Ao, Aotou Harbor) and northeast parts of Daya Bay, which are areas of human activity. The thermal pollution has been observed near water body in Daya Bay Nuclear Power Plant (S5). The rest of the monitoring sites were in the south, central and eastern parts of Daya Bay, which are areas that experience water exchanges from South China Sea. The results of this study may provide information on the spatial and temporal patterns in Daya Bay. Further research will be carry out more research concerning functional changes in the bay ecology with respect to changes in climatic factor, human activities and bay morphology in Daya Bay. PMID:25847104

  12. Assessment for water quality by artificial neural network in Daya Bay, South China Sea.

    PubMed

    Wu, Mei-Lin; Wang, You-Shao; Gu, Ji-Dong

    2015-10-01

    In this study, artificial neural network such as a self-organizing map (SOM) was used to assess for the effects caused by climate change and human activities on the water quality in Daya Bay, South China Sea. SOM has identified the anthropogenic effects and seasonal characters of water quality. SOM grouped the four seasons as four groups (winter, spring, summer and autumn). The Southeast Asian monsoons, northeasterly from October to the next April and southwesterly from May to September have also an important influence on the water quality in Daya Bay. Spatial pattern is mainly related to anthropogenic activities and hydrodynamics conditions. In spatial characteristics, the water quality in Daya Bay was divided into two groups by chemometrics. The monitoring stations (S3, S8, S10 and S11) were in these area (Dapeng Ao, Aotou Harbor) and northeast parts of Daya Bay, which are areas of human activity. The thermal pollution has been observed near water body in Daya Bay Nuclear Power Plant (S5). The rest of the monitoring sites were in the south, central and eastern parts of Daya Bay, which are areas that experience water exchanges from South China Sea. The results of this study may provide information on the spatial and temporal patterns in Daya Bay. Further research will be carry out more research concerning functional changes in the bay ecology with respect to changes in climatic factor, human activities and bay morphology in Daya Bay.

  13. A review of circulation and mixing studies of San Francisco Bay, California

    USGS Publications Warehouse

    Smith, Lawrence H.

    1987-01-01

    influenced by delta discharge, and South Bay, a tributary estuary which responds to conditions in Central Bay. In the northern reach net circulation is characterized by the river-induced seaward, flow and a resulting gravitational circulation in the channels, and by a tide- and wind-induced net horizontal circulation. A surface layer of relatively fresh water in Central Bay generated by high delta discharges can induce gravitational circulation in South Bay. During low delta discharges South Bay has nearly the same salinity as Central Bay and is characterized by tide- and wind-induced net horizontal circulation. Several factors control the patterns of circulation and mixing in San Francisco Bay. Viewing circulation and mixing over different time-periods and at different geographic scales causes the influences of different factors to be emphasized. The exchange between the bay and coastal ocean and freshwater inflows determine the year-to-year behavior of San Francisco Bay as a freshwater-saltwater mixing zone. Within the bay, exchanges between the embayments control variations over a season. Circulation and mixing patterns within the embayments and the magnitude of river-induced seaward flow influence the between-bay exchanges. The within-bay patterns are in turn determined by tides, winds, and freshwater inflows. Because freshwater inflow is the only factor that can be managed, a major study focus is estimation of inflow-related effects. Most questions relate to the patterns of freshwater inflow necessary to protect valuable resources whose welfare is dependent on conditions in the bay. Among the important questions being addressed are: --What quantity of freshwater inflow is necessary to prevent salt intrusion into the Sacramento-San Joaquin Delta, and what salinity distributions in the bay would result from various inflow patterns? --What quantity of freshwater inflow is sufficient to flush pollutants through the bay? Knowledge of circul

  14. Matrix fractional systems

    NASA Astrophysics Data System (ADS)

    Tenreiro Machado, J. A.

    2015-08-01

    This paper addresses the matrix representation of dynamical systems in the perspective of fractional calculus. Fractional elements and fractional systems are interpreted under the light of the classical Cole-Cole, Davidson-Cole, and Havriliak-Negami heuristic models. Numerical simulations for an electrical circuit enlighten the results for matrix based models and high fractional orders. The conclusions clarify the distinction between fractional elements and fractional systems.

  15. Aluminium (Al) fractionation and speciation; getting closer to describing the factors influencing Al(3+) in water impacted by acid mine drainage.

    PubMed

    Chamier, Jessica; Wicht, Merrill; Cyster, Lilburne; Ndindi, Nosintu P

    2015-07-01

    Acid mine drainage (AMD) severely impacts the water chemistry of a receiving resource, changing the occurrence, speciation and toxicity of metals such as Aluminium (Al). The toxicity of Al is determined by its speciation represented by the labile monomer Al fraction or Al(3+). The purpose of the study was to combine fractionation and Visual MINTEQ speciation to calculate the effect of AMD altered water chemistry on Al speciation and Al(3+) concentration. Water in rivers impacted by AMD presented with monomeric Al (Almon) concentrations between 0.35 and 15.37mgL(-)(1) which existed almost exclusively in the toxic labile form (98%). For the reference site, Almon was less than 2% (10μgL(-1)), suggesting significantly lower Al toxicity. Principal component analysis plots illustrated that labile Al was directly related to the total Al and iron concentrations and strongly influenced by parameters such as pH, electrical conductivity, sulphate and dissolved organic carbon. Visual MINTEQ modelling was used to determine the primary Al species distribution. The dominant form of Al in AMD impacted water was AlSO4(+), which increased proportionally with the sulphate and Al(3+) concentration. Heavily impacted areas, presented with an average of 1mgmL(-)(1) Al(3+), which poses a potential human health risk. A novel centrifugal ultrafiltration method was investigated as an alternative to determining Almon to simplify the speciation of Al. Monomeric and centrifugal ultrafiltrated (<10kD) Al fractions were significantly similar (p=0.74), suggesting that ultrafiltration may present a time, energy and cost saving alternative to organic extraction of Almon.

  16. Aluminium (Al) fractionation and speciation; getting closer to describing the factors influencing Al(3+) in water impacted by acid mine drainage.

    PubMed

    Chamier, Jessica; Wicht, Merrill; Cyster, Lilburne; Ndindi, Nosintu P

    2015-07-01

    Acid mine drainage (AMD) severely impacts the water chemistry of a receiving resource, changing the occurrence, speciation and toxicity of metals such as Aluminium (Al). The toxicity of Al is determined by its speciation represented by the labile monomer Al fraction or Al(3+). The purpose of the study was to combine fractionation and Visual MINTEQ speciation to calculate the effect of AMD altered water chemistry on Al speciation and Al(3+) concentration. Water in rivers impacted by AMD presented with monomeric Al (Almon) concentrations between 0.35 and 15.37mgL(-)(1) which existed almost exclusively in the toxic labile form (98%). For the reference site, Almon was less than 2% (10μgL(-1)), suggesting significantly lower Al toxicity. Principal component analysis plots illustrated that labile Al was directly related to the total Al and iron concentrations and strongly influenced by parameters such as pH, electrical conductivity, sulphate and dissolved organic carbon. Visual MINTEQ modelling was used to determine the primary Al species distribution. The dominant form of Al in AMD impacted water was AlSO4(+), which increased proportionally with the sulphate and Al(3+) concentration. Heavily impacted areas, presented with an average of 1mgmL(-)(1) Al(3+), which poses a potential human health risk. A novel centrifugal ultrafiltration method was investigated as an alternative to determining Almon to simplify the speciation of Al. Monomeric and centrifugal ultrafiltrated (<10kD) Al fractions were significantly similar (p=0.74), suggesting that ultrafiltration may present a time, energy and cost saving alternative to organic extraction of Almon. PMID:25747302

  17. Chesapeake bay nonpoint source programs

    SciTech Connect

    Not Available

    1988-01-01

    This report describes the current programs to ameliorate nonpoint sources of pollution to the Chesapeake Bay that have been developed by the four jurisdictions in cooperation with other agencies, the achievements to date in terms of pollutant removal, and recommendations for future directions of the Bay Program over the next several years.

  18. Learning on the Big Bay

    ERIC Educational Resources Information Center

    Philp, Michael J.

    1978-01-01

    Anne Arundel Community College uses the Chesapeake Bay for a flexible ocean engineering technology program which includes mechanical, electrical, and environmental options for transfer and/or vocational students, and adult education programs covering such subjects as sailing, Bay history, boat building, scuba-diving, and marine biology. (RT)

  19. The Bayes Inference Engine

    SciTech Connect

    Hanson, K.M.; Cunningham, G.S.

    1996-04-01

    The authors are developing a computer application, called the Bayes Inference Engine, to provide the means to make inferences about models of physical reality within a Bayesian framework. The construction of complex nonlinear models is achieved by a fully object-oriented design. The models are represented by a data-flow diagram that may be manipulated by the analyst through a graphical programming environment. Maximum a posteriori solutions are achieved using a general, gradient-based optimization algorithm. The application incorporates a new technique of estimating and visualizing the uncertainties in specific aspects of the model.

  20. The outflow of radionuclides from Novaya Zemlya bays--modeling and monitoring strategies.

    PubMed

    Harms, I H; Povinec, P P

    1999-09-30

    Hydrodynamic model results are used to evaluate possible monitoring strategies for a continuous survey of underwater dump sites. The Hamburg Shelf Ocean Model (HAMSOM) is applied to Abrosimov Bay and forced with realistic, transient wind fields and air temperatures. The three-dimensional circulation model is coupled to a dynamic-thermodynamic ice model that accounts for surface heat fluxes, fractional ice cover and ice thickness. Model results show significant variations in the bay circulation due to a pronounced seasonality in the wind forcing and the ice cover. The circulation is weakest in early summer when wind speeds are low and the ice still covers most parts of the bay. In autumn, circulation and flushing of the bay is most enhanced, due to increasing wind speeds and the absence of an ice cover. Dispersion scenarios were carried out assuming a leakage at dumped objects. During most of the year the obtained tracer concentrations in the bay are higher in the upper layers than close to the bottom, indicating an outflow at the surface and a compensatory inflow below. This general pattern is only reversed during spring and early summer, when the wind directions change. Since ice problems make it almost impossible to monitor surface waters or even the whole water column in a shallow bay, the only way to install a monitoring system, is at the bottom of the bay, as close as possible to dumped objects. Data transmission via satellite or radio could be realized from a small station located on the bay's edge.

  1. Interdisciplinary environmental project probes Chesapeake Bay down to the core

    NASA Astrophysics Data System (ADS)

    Cronin, T.; Colman, S.; Willard, D.; Kerhin, R.; Holmes, C.; Karlsen, A.; Ishman, S.; Bratton, J.

    Interrelated environmental concerns about Chesapeake Bay are being addressed in an interdisciplinary project using paleoecological and geochemical records from sediment cores to investigate Holocene climate and human encroachment. The research is looking at interannual through millennial-scale variability of bay salinity,sediment accumulation, and dissolved oxygen, temperature, and faunal and floral trends. Current and planned research is expected to result in better restoration strategies by improving our understanding of the linkages between the bay's ecosystem, climate, and land use.Chesapeake Bay, the United States' largest and most productive estuary, faces several complex environmental issues, including eutrophication and anoxia in the main channel and tributaries, high turbidity and rates of sedimentation, outbreaks of the toxic dinoflagellate Pfiesteria piscicida, and coastal erosion and submergence tied to sea-level rise. Such problems often are attributed to human activities in the bay's watershed, including pollution, urbanization, and deforestation, but it now is recognized that climatic factors also strongly influence bay salinity, temperature, and water quality.

  2. Source identification and assessment of sediment contamination of trace metals in Kogarah Bay, NSW, Australia.

    PubMed

    Alyazichi, Yasir M; Jones, Brian G; McLean, Errol

    2015-02-01

    The distribution of trace metals (spatial and temporal) and sedimentary fractions were investigated to identify the concentrations and sources of trace metals within Kogarah Bay, NSW, Australia. A total of 59 surface sediments and six subsurface samples from core of the sediment were collected. The contamination factor and pollution load index indices used to evaluate environmental effects of trace metals. The study area was found to be uncontaminated with Cr and Ni, moderately contaminated with As and considerably contaminated with Cu, Zn and Pb. The concentrations of Cr and Ni were below both effect range low and effect range median, while As, Cu, Zn and Pb were slightly above effect range low. The highest concentrations of these trace metals such as Cu, Zn and Pb were found in the north, northwest and southeast of the bay, close to discharge points, stormwater outlets and around boatyards and watercrafts. The spatial distributions of metals were strongly related to muddy particles and organic matter. The temporal sediments of metals declined with increased sediment depth, which reflects accumulation of trace metals since European settlement in this area. Furthermore, the source of the trace metals was found to be stormwater outlets, gasoline fumes, boatyards and other human activities.

  3. Hydrogen and acetate cycling in two sulfate-reducing sediments: Buzzards Bay and Town Cove, Mass.

    NASA Astrophysics Data System (ADS)

    Novelli, P. C.; Michelson, A. R.; Scranton, M. I.; Banta, G. T.; Hobbie, J. E.; Howarth, R. W.

    1988-10-01

    Molecular hydrogen and acetate are believed to be key intermediates in the anaerobic remineralization of organic carbon. We have made measurements of the cycling of both these compounds in two marine sediments: the bioturbated sediments of Buzzards Bay, Mass., and the much more reducing sediments of Town Cove, Orleans, Mass. Hydrogen concentrations are similar in these environments (from less than 5 to 30 nM), and are within the range previously reported for coastal sediments. However, apparent hydrogen production rates differ by a factor of 60 between these two sediments and at both sites show strong correlation with measured rates of sulfate reduction. Acetate concentrations generally increased with depth in both environments; this increase was greater in Buzzards Bay (22.5 to 71.5 μM) than in Town Cove (26 to 44 μM). Acetate oxidation rates calculated from measured concentrations and 14C-acetate consumption rate constants suggest that the measured acetate was not all available to sulfate-reducing bacteria. Using the measured sulfate reduction rates, we estimate that between 2% and 100% of the measured acetate pool is biologically available, and that the "bioavailable" pool decreases with depth. A diagenetic model of the total acetate concentration suggests that consumption may be first order with respect to only a fraction of the total pool.

  4. Geochemical estimation of copper contamination in the healing mud from Makirina Bay, central Adriatic.

    PubMed

    Vreca, Polona; Dolenec, Tadej

    2005-01-01

    The coastal sediment from Makirina Bay in the central Adriatic represents an important source of healing mud (peloid) of high quality organoleptic properties that could in future be used for medical treatment. In this study, we estimated the contamination of the sediment with copper which can cause some undesirable health effects. Concentrations of Cu vary from 12 to 63 mg/kg in surface sediment and are higher in the central part of the Bay where the mud fraction prevails. Different normalizing methods were used, i.e. surface/background ratio, index of geoaccumulation, reference metal normalization, enrichment factor (EF) and grain size normalization, to compensate for the influence of the natural variability in sediment mineralogy and granulometry, and to assess whether the concentrations observed in surface sediment represent background or contaminated levels. Results show that Cu concentrations in the surface sediment are twice as high as local background values but in the same range as many clay materials used for medical treatment in Italy. The results also show that more detailed studies on Cu mobility are necessary prior to actual use of peloid in medical treatment.

  5. The Use of a Fractional Factorial Design to Determine the Factors That Impact 1,3-Propanediol Production from Glycerol by Halanaerobium hydrogeniformans.

    PubMed

    Kalia, Shivani; Trager, Jordan; Sitton, Oliver C; Mormile, Melanie R

    2016-01-01

    In recent years, biodiesel, a substitute for fossil fuels, has led to the excessive production of crude glycerol. The resulting crude glycerol can possess a high concentration of salts and an alkaline pH. Moreover, current crude glycerol purification methods are expensive, rendering this former commodity a waste product. However, Halanaerobium hydrogeniformans, a haloalkaliphilic bacterium, possesses the metabolic capability to convert glycerol into 1,3-propanediol, a valuable commodity compound, without the need for salt dilution or adjusting pH when grown on this waste. Experiments were performed with different combinations of 24 medium components to determine their impact on the production of 1,3-propanediol by using a fractional factorial design. Tested medium components were selected based on data from the organism's genome. Analysis of HPLC data revealed enhanced production of 1,3-propanediol with additional glycerol, pH, vitamin B12, ammonium ions, sodium sulfide, cysteine, iron, and cobalt. However, other selected components; nitrate ions, phosphate ions, sulfate ions, sodium:potassium ratio, chloride, calcium, magnesium, silicon, manganese, zinc, borate, nickel, molybdenum, tungstate, copper and aluminum, did not enhance 1,3-propanediol production. The use of a fractional factorial design enabled the quick and efficient assessment of the impact of 24 different medium components on 1,3-propanediol production from glycerol from a haloalkaliphilic bacterium. PMID:27556494

  6. The Use of a Fractional Factorial Design to Determine the Factors That Impact 1,3-Propanediol Production from Glycerol by Halanaerobium hydrogeniformans

    PubMed Central

    Kalia, Shivani; Trager, Jordan; Sitton, Oliver C.; Mormile, Melanie R.

    2016-01-01

    In recent years, biodiesel, a substitute for fossil fuels, has led to the excessive production of crude glycerol. The resulting crude glycerol can possess a high concentration of salts and an alkaline pH. Moreover, current crude glycerol purification methods are expensive, rendering this former commodity a waste product. However, Halanaerobium hydrogeniformans, a haloalkaliphilic bacterium, possesses the metabolic capability to convert glycerol into 1,3-propanediol, a valuable commodity compound, without the need for salt dilution or adjusting pH when grown on this waste. Experiments were performed with different combinations of 24 medium components to determine their impact on the production of 1,3-propanediol by using a fractional factorial design. Tested medium components were selected based on data from the organism’s genome. Analysis of HPLC data revealed enhanced production of 1,3-propanediol with additional glycerol, pH, vitamin B12, ammonium ions, sodium sulfide, cysteine, iron, and cobalt. However, other selected components; nitrate ions, phosphate ions, sulfate ions, sodium:potassium ratio, chloride, calcium, magnesium, silicon, manganese, zinc, borate, nickel, molybdenum, tungstate, copper and aluminum, did not enhance 1,3-propanediol production. The use of a fractional factorial design enabled the quick and efficient assessment of the impact of 24 different medium components on 1,3-propanediol production from glycerol from a haloalkaliphilic bacterium. PMID:27556494

  7. Uncertainty analysis of fission fraction for reactor antineutrino experiments

    NASA Astrophysics Data System (ADS)

    Ma, X. B.; Lu, F.; Wang, L. Z.; Chen, Y. X.; Zhong, W. L.; An, F. P.

    2016-06-01

    Reactor simulation is an important source of uncertainties for a reactor neutrino experiment. Therefore, how to evaluate the antineutrino flux uncertainty results from reactor simulation is an important question. In this study, a method of the antineutrino flux uncertainty result from reactor simulation was proposed by considering the correlation coefficient. In order to use this method in the Daya Bay antineutrino experiment, the open source code DRAGON was improved and used for obtaining the fission fraction and correlation coefficient. The average fission fraction between DRAGON and SCIENCE code was compared and the difference was less than 5% for all the four isotopes. The uncertainty of fission fraction was evaluated by comparing simulation atomic density of four main isotopes with Takahama-3 experiment measurement. After that, the uncertainty of the antineutrino flux results from reactor simulation was evaluated as 0.6% per core for Daya Bay antineutrino experiment.

  8. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California. 165.1197 Section 165.1197 Navigation and... Areas Eleventh Coast Guard District § 165.1197 Security Zones; San Francisco Bay, San Pablo...

  9. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California. 165.1197 Section 165.1197 Navigation and... Areas Eleventh Coast Guard District § 165.1197 Security Zones; San Francisco Bay, San Pablo...

  10. Tampa Bay environmental atlas

    SciTech Connect

    Kunneke, J.T.; Palik, T.F.

    1984-12-01

    Biological and water resource data for Tampa Bay were compiled and mapped at a scale of 1:24,000. This atlas consists of (1) composited information overlain on 18 biological and 20 water resource base maps and (2) an accompanying map narrative. Subjects mapped on the water resource maps are contours of the mean middepth specific conductivity which can be converted to salinity; bathymetry, sediments, tidal currents, the freshwater/saltwater interface, dredge spoil disposal sites; locations of industrial and municipal point source discharges, tide stations, and water quality sampling stations. The point source discharge locations show permitted capacity and the water quality sampling stations show 5-year averages for chlorophyll, conductivity, turbidity, temperature, and total nitrogen. The subjects shown on the biological resource maps are clam and oyster beds, shellfish harvest areas, colonial bird nesting sites, manatee habitat, seagrass beds and artificial reefs. Spawning seasons, nursery habitats, and adult habitats are identified for major fish species. The atlas will provide useful information for coastal planning and management in Tampa Bay.

  11. 76 FR 54380 - Safety Zone; Suttons Bay Labor Day Fireworks, Suttons Bay, Grand Traverse Bay, MI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-01

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Suttons Bay Labor Day Fireworks, Suttons... Commerce will conduct a fireworks display to celebrate Labor Day. The celebration will take place next to... associated with the Suttons Bay Labor Day Fireworks, the Captain of the Port, Sector Sault Sainte Marie...

  12. Oxygen isotope fractionation in double carbonates.

    PubMed

    Zheng, Yong-Fei; Böttcher, Michael E

    2016-01-01

    Oxygen isotope fractionations in double carbonates of different crystal structures were calculated by the increment method. Synthesis experiments were performed at 60 °C and 100 °C to determine oxygen and carbon isotope fractionations involving PbMg[CO3]2. The calculations suggest that the double carbonates of calcite structure are systematically enriched in (18)O relative to those of aragonite and mixture structures. Internally consistent oxygen isotope fractionation factors are obtained for these minerals with respect to quartz, calcite and water at a temperature range of 0-1200 °C. The calculated fractionation factors for double carbonate-water systems are generally consistent with the data available from laboratory experiments. The experimentally determined fractionation factors for PbMg[CO3]2, BaMg[CO3]2 and CaMg[CO3]2 against H2O not only fall between fractionation factors involving pure carbonate end-members but are also close to the calculated fractionation factors. In contrast, experimentally determined carbon isotope fractionation factors between PbMg[CO3]2 and CO2 are much closer to theoretical predictions for the cerussite-CO2 system than for the magnesite-CO2 system, similar to the fractionation behavior for BaMg[CO3]2. Therefore, the combined theoretical and experimental results provide insights into the effects of crystal structure and exchange kinetics on oxygen isotope partitioning in double carbonates.

  13. Initialized Fractional Calculus

    NASA Technical Reports Server (NTRS)

    Lorenzo, Carl F.; Hartley, Tom T.

    2000-01-01

    This paper demonstrates the need for a nonconstant initialization for the fractional calculus and establishes a basic definition set for the initialized fractional differintegral. This definition set allows the formalization of an initialized fractional calculus. Two basis calculi are considered; the Riemann-Liouville and the Grunwald fractional calculi. Two forms of initialization, terminal and side are developed.

  14. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...: The Corps of Engineers also has regulations dealing with these areas in 33 CFR Part 207. ... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel...

  15. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...: The Corps of Engineers also has regulations dealing with these areas in 33 CFR Part 207. ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel...

  16. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...: The Corps of Engineers also has regulations dealing with these areas in 33 CFR Part 207. ... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel...

  17. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...: The Corps of Engineers also has regulations dealing with these areas in 33 CFR Part 207. ... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel...

  18. Chesapeake Bay: Introduction to an Ecosystem.

    ERIC Educational Resources Information Center

    Environmental Protection Agency, Washington, DC.

    The Chesapeake Bay is the largest estuary in the contiguous United States. The Bay and its tidal tributaries make up the Chesapeake Bay ecosystem. This document, which focuses of various aspects of this ecosystem, is divided into four major parts. The first part traces the geologic history of the Bay, describes the overall physical structure of…

  19. Assessing change of environmental dynamics by legislation in Japan, using red tide occurrence in Ise Bay as an indicator.

    PubMed

    Suzuki, Chika

    2016-01-30

    Tokyo Bay, Ise Bay, and the Seto Inland Sea are the total pollutant load control target areas in Japan. A significant correlation between the incidence of red tides and water quality has been observed in the Seto Inland Sea (Honjo, 1991). However, while red tides also occur in Ise Bay and Tokyo Bay, similar correlations have not been observed. Hence, it is necessary to understand what factors cause red tides to effectively manage these semi-closed systems. This study aims to investigate the relationship between the dynamics of the Red Tide Index and nitrogen regulation as well as phosphorus regulation, even in Ise Bay where, unlike Tokyo Bay, there are few observation items, by selecting a suitable objective variable. The introduction of a new technique that uses the Red Tide Index has revealed a possibility that the total pollution load control has influenced the dynamics of red tide blooms in Ise Bay.

  20. Assessing change of environmental dynamics by legislation in Japan, using red tide occurrence in Ise Bay as an indicator.

    PubMed

    Suzuki, Chika

    2016-01-30

    Tokyo Bay, Ise Bay, and the Seto Inland Sea are the total pollutant load control target areas in Japan. A significant correlation between the incidence of red tides and water quality has been observed in the Seto Inland Sea (Honjo, 1991). However, while red tides also occur in Ise Bay and Tokyo Bay, similar correlations have not been observed. Hence, it is necessary to understand what factors cause red tides to effectively manage these semi-closed systems. This study aims to investigate the relationship between the dynamics of the Red Tide Index and nitrogen regulation as well as phosphorus regulation, even in Ise Bay where, unlike Tokyo Bay, there are few observation items, by selecting a suitable objective variable. The introduction of a new technique that uses the Red Tide Index has revealed a possibility that the total pollution load control has influenced the dynamics of red tide blooms in Ise Bay. PMID:26337227

  1. Bayes multiple decision functions.

    PubMed

    Wu, Wensong; Peña, Edsel A

    2013-01-01

    This paper deals with the problem of simultaneously making many (M) binary decisions based on one realization of a random data matrix X. M is typically large and X will usually have M rows associated with each of the M decisions to make, but for each row the data may be low dimensional. Such problems arise in many practical areas such as the biological and medical sciences, where the available dataset is from microarrays or other high-throughput technology and with the goal being to decide which among of many genes are relevant with respect to some phenotype of interest; in the engineering and reliability sciences; in astronomy; in education; and in business. A Bayesian decision-theoretic approach to this problem is implemented with the overall loss function being a cost-weighted linear combination of Type I and Type II loss functions. The class of loss functions considered allows for use of the false discovery rate (FDR), false nondiscovery rate (FNR), and missed discovery rate (MDR) in assessing the quality of decision. Through this Bayesian paradigm, the Bayes multiple decision function (BMDF) is derived and an efficient algorithm to obtain the optimal Bayes action is described. In contrast to many works in the literature where the rows of the matrix X are assumed to be stochastically independent, we allow a dependent data structure with the associations obtained through a class of frailty-induced Archimedean copulas. In particular, non-Gaussian dependent data structure, which is typical with failure-time data, can be entertained. The numerical implementation of the determination of the Bayes optimal action is facilitated through sequential Monte Carlo techniques. The theory developed could also be extended to the problem of multiple hypotheses testing, multiple classification and prediction, and high-dimensional variable selection. The proposed procedure is illustrated for the simple versus simple hypotheses setting and for the composite hypotheses setting

  2. Fractionally charged skyrmions in fractional quantum Hall effect

    DOE PAGES

    Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

    2015-11-26

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeemanmore » energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.« less

  3. Atmospheric deposition fluxes to Monetary Bay

    NASA Astrophysics Data System (ADS)

    Gray, E.; Paytan, A.; Ryan, J.

    2008-12-01

    Atmospheric deposition has been widely recognized as a source of pollutants and nutrients to coastal ecosystems. Specifically, deposition includes nitrogen compounds, sulfur compounds, mercury, pesticides, phosphate, trace metals and other toxic compounds that can travel great distances. Sources of these components include both natural (volcanoes, mineral dust, forest fires) and anthropogenic (fossil fuels, chemical byproducts, incineration of waste) sources, which may contribute to harmful health and environmental impacts such as eutrophication, contaminated fish and harmful algal blooms. This study looks at the flux of aerosol deposition (TSP - total suspended particle load) to Monterey Bay, California. Samples are collected on a cascade impactor aerosol sampler (size fractions PM 2.5 and PM 10) every 48 hours continuously. Preliminary results indicate that the TSP for PM 10 ranged from 0.026 to 0.104 mg m-3 of air and for PM 2.5 from 0.014 to 0.046 mg m-3 of air. Using a deposition velocity of 2 cm s-1 for the large fraction (PM10 - PM 2.5) and a deposition velocity of 0.7 cm s-1 for the fine fraction (PM 2.5) deposition rates are 13 and 86 mg m-2 d-1 respectively.

  4. Mixed sediment beach processes: Kachemak Bay, Alaska

    USGS Publications Warehouse

    Ruggiero, P.; Adams, P.N.; Warrick, J.A.

    2007-01-01

    Mixed sediment beaches are morphologically distinct from and more complex than either sand or gravel only beaches. Three digital imaging techniques are employed to quantify surficial grain size and bedload sediment transport rates along the mixed sediment beaches of Kachemak Bay, Alaska. Applying digital imaging procedures originally developed for quickly and efficiently quantifying grain sizes of sand to coarse sediment classes gives promising results. Hundreds of grain size estimates lead to a quantitative characterization of the region's sediment at a significant reduction in cost and time as compared to traditional techniques. Both the sand and coarse fractions on this megatidal beach mobilize into self-organized bedforms that migrate alongshore with a seasonally reflecting the temporal pattern of the alongshore component of wave power. In contrast, the gravel bedforms also migrate in the cross-shore without significant seasonally suggesting that swash asymmetry is sufficient to mobilize the gravel even during low energy summer conditions. ?? 2007 ASCE.

  5. Modeling bioaccumulation and biotransformation of PAHs and PCBs by benthic macrofauna from lower Chesapeake Bay

    SciTech Connect

    Dickhut, R.M.; Schaffner, L.C.; Lay, P.; Mitra, S.

    1995-12-31

    The bioaccumulation and biotransformation of selected PAHs and PCBs from sediments spiked with radiolabeled compounds were examined in benthic communities from lower chesapeake Bay during summer and winter. Kinetic models were then used to determine the steady-state bioaccumulation factors (BAFs) for the parent compounds in various benthic macrofaunal organisms, as well as the BAFs of aqueous soluble metabolites that tended to accumulate in the animals. BAFs for the parent compounds increased with the octanol-water partition coefficient (K{sub ow}) of the compound up to a log K{sub ow} of approximately 6. However, in contrast to previous studies, the elimination rate constant was the dominant factor controlling the observed nonequilibrium with respect to bioaccumulation of the organic contaminants. Consequently, BAFs for the parent contaminants were related to the physical-chemical factors regulating passive elimination, as well as metabolic transformation of the parent compound. Aqueous soluble metabolite BAFs were directly related to the physical-chemical factors dictating the rate of formation of the conjugated complexes. Overall, body burdens of organic contaminants were higher in the summer relative to winter, as were the aqueous soluble metabolite fractions of contaminants in the animals, possibly indicating that organism activities as well as lipid pools are higher in summer compared to winter. The results indicate that a variety of physical, chemical, and biological factors interact in the ecosystem to dictate bioaccumulation and biotransformation of organic contaminants.

  6. THEORETICAL AND EXPERIMENTAL ASPECTS OF ISOTOPIC FRACTIONATION.

    USGS Publications Warehouse

    O'Neil, James R.

    1986-01-01

    Essential to the interpretation of natural variations of light stable isotope ratios is knowledge of the magnitude and temperature dependence of isotopic fractionation factors between the common minerals and fluids. These fractionation factors are obtained in three ways: (1) Semi-empirical calculations using spectroscopic data and the methods of statistical mechanics. (2) Laboratory calibration studies. (3) Measurements of natural samples whose formation conditions are well-known or highly constrained. In this chapter methods (1) and (2) are evaluated and a review is given of the present state of knowledge of the theory of isotopic fractionation and the fraction that influence the isotopic properties of minerals.

  7. Microcontaminants and reproductive impairment of the Forster's tern on Green Bay, Lake Michigan,1983

    USGS Publications Warehouse

    Kubiak, T.J.; Harris, H.J.; Smith, L.M.; Schwartz, T.R.; Stalling, D.L.; Trick, J.A.; Sileo, L.; Docherty, D.E.; Erdman, T.C.

    1989-01-01

    in an egg-exchange experiment, but was sharply decreased in Lake Poygan eggs incubated in Green Bay nests. Nest abandonment and egg disappearance were substantial at Green Bay but nil at Lake Poygan. Thus, not only factors intrinsic to the egg, but also extrinsic factors (parental attentiveness), impaired reproductive outcome at Green Bay. The epidemiological evidence from this study strongly suggested that contaminants were a causal factor. AHH-active PCB congeners (intrinsic effects) and PCBs in general (extrinsic effects) appeared to be the only contaminants at the concentrations measured in eggs, capable of producing the effects that were observed at Green Bay.

  8. Spatial and seasonal patterns of ichthyoplankton assemblages in the Haizhou Bay and its adjacent waters of China

    NASA Astrophysics Data System (ADS)

    Li, Zengguang; Ye, Zhenjiang; Wan, Rong

    2015-12-01

    Surveys were conducted in five voyages in Haizhou Bay and its adjacent coastal area from March to December 2011 during full moon spring tides. The ichthyoplankton assemblages and the environmental factors that affect their spatial and seasonal patterns were determined. Totally 35 and 12 fish egg and larvae taxa were identified, respectively. Over the past several decades, the egg and larval species composition has significantly changed in Haizhou Bay and its adjacent waters, most likely corresponding with the alteration of fishery resources, which are strongly affected by anthropogenic activities and climate change. The Bray-Curtis dissimilarity index identified four assemblages: near-shore bay assemblage, middle bay assemblage and two closely related assemblages (near-shore/middle bay assemblage and middle/edge of bay assemblage). The primary species of each assemblage principally reflected the spawning strategies of adult fish. The near-shore bay assemblage generally occurred in near-shore bay, with depths measuring <20 m, and the middle bay assemblage generally occurred in the middle of bay, with depths measuring 20 to 40 m. Spatial and seasonal variations in ichthyoplankton in each assemblage were determined by interactions between biological behavioral traits and oceanographic features, particularly the variation of local conditions within the constraint of a general reproductive strategy. The results of Spearman's rank correlation analysis indicated that both fish egg and larval abundance were positively correlated with depth, which is critical to the oceanographic features in Haizhou Bay.

  9. Key factors affecting on bio-hydrogen production from co-digestion of organic fraction of municipal solid waste and kitchen wastewater.

    PubMed

    Tawfik, Ahmed; El-Qelish, Mohamed

    2014-09-01

    The effects of sludge residence time (SRT) and dilution ratio (DR) on the continuous H2 production (HP) from co-digestion of organic fraction of municipal solid waste (OFMSW) and kitchen wastewater (KWW) via mesophilic anaerobic baffled reactor (ABR) was investigated. Increasing DR from 1:2 to 1:3 significantly (P<0.1) increased the H2 yield (HY) from 116.5±76 to 142.5±54 ml H2/g CODremoved d, respectively. However, at a DR of 1:4, the HY was dropped to 114.5±65 ml H2/g CODremoved d. Likewise, HY increased from 83±37 to 95±24 ml H2/g CODremoved d, when SRT increased from 3.6 to 4.0 d. Further increase in HY of 148±42 ml H2/g CODremoved d, was occurred at a SRT of 5.6d. Moreover, hydrogen fermentation facilitated carbohydrate, lipids, protein and volatile solids removal efficiencies of 87±5.8%, 74.3±9.12%, 76.4±11.3% and 84.8±4.1%, respectively.

  10. Seasonal and spatial characteristics of seawater and sediment at Youngil Bay, southeast coast of Korea.

    PubMed

    Lee, Mikyung; Bae, Wookeun; Chung, Jinwook; Jung, Hoi-Soo; Shim, Hojae

    2008-01-01

    analysis showed that the major controlling factors for the distribution pattern of each metal are grain size and organic carbon (C(org)) content. Based on the factor analysis, Al, Fe, Cr, Li, and Pb were shown strongly correlated with the mean grain size (Mz), whereas Cd, Cu, Zn, and Sn with the C(org) content. Results from the fractionation of the sedimentary metals into lattice and labile fractions to characterize the mobility of sediment metals showed that the mineral lattice fraction was high in the order of Al=K>Cr>Li>Sr>Fe, while the labile fraction, which might be released to the overlying water, was in the order of Pb>Zn>Cd>Cu>Ca>Sn. Evaluation of the sediment pollution status by applying (I(geo)(')) of 13 metals showed Cd, Cu, and Zn as high as 1-3 range at the old port. Even though the overall marine pollution mainly by the world-class steel industrial complex in this semi-enclosed bay area studied does not currently pose a serious threat, due to the seawater circulation and the large influx of river discharge, the countermeasures to implement the sediments concentrated with heavy metals, especially at the old port with no seawater circulation, are still warranted for this coastal water environment.

  11. Controls on residence time and exchange in a system of shallow coastal bays

    NASA Astrophysics Data System (ADS)

    Safak, I.; Wiberg, P. L.; Richardson, D. L.; Kurum, M. O.

    2015-04-01

    Patterns of transport and residence time influence the morphology, ecology and biogeochemistry of shallow coastal bay systems in important ways. To better understand the factors controlling residence time and exchange in coastal bays, a three-dimensional finite-volume coastal ocean model was set up and validated with field observations of circulation in a system of 14 shallow coastal bays on the Atlantic coast of the USA (Virginia Coast Reserve). Residence times of neutrally buoyant particles as well as exchange among the bays in the system and between the bays and the ocean were examined with Lagrangian particle tracking. There was orders of magnitude variation in the calculated residence time within most of the bays, ranging from hours in the tidally refreshed (repletion) water near the inlets to days-weeks in the remaining (residual) water away from the inlets. Residence time in the repletion waters was most sensitive to the tidal phase (low vs. high) when particles were released whereas residence time in the residual waters was more sensitive to wind forcing. Wind forcing was found to act as a diffuser that shortens particle residence within the bays; its effect was higher away from the inlets and in relatively confined bays. Median residence time in the bays significantly decreased with an increase in the ratio between open water area and total area (open water plus marsh). Exchange among the bays and capture areas of inlets (i.e., exchange between the bays and the ocean) varied considerably but were insensitive to tidal phase of release, wind, and forcing conditions in different years, in contrast to the sensitivity of residence time to these factors. We defined a new quantity, termed shortest-path residence time, calculated as distance from the closest inlet divided by root-mean-square velocity at each point in model domain. A relationship between shortest-path residence time and particle-tracking residence time provides a means of estimating residence time

  12. Eutrophication in the Chesapeake Bay

    NASA Technical Reports Server (NTRS)

    Ulanowicz, R. E.

    1978-01-01

    The advantages and limitations of using remote sensing to acquire fast reliable data on the nutrient problem in the Chesapeake Bay ecosystem are discussed. Pollution effects to phytoplankton blooms during late summer and early fall months are also considered.

  13. A HABITAT SUITABILITY INDEX FOR THE BAY SCALLOP ARGOPECTEN IRRADIANS

    EPA Science Inventory

    Poster presentation at a scientific meeting. A survey of Lagoon Pond, Martha's Vineyard, MA, USA was conducted in September 2005 to determine the combination of habitat factors most highly correlated with the bay scallop Argopecten irradians) abundance. A stratified random samp...

  14. Sedimentation and bathymetry changes in Suisun Bay: 1867-1990

    USGS Publications Warehouse

    Cappiella, Karen; Malzone, Chris; Smith, Richard; Jaffe, Bruce

    1999-01-01

    Understanding patterns of historical erosion and deposition in San Francisco Bay is crucial in managing such issues as locating deposits of sediment-associated contaminants, and the restoration of wetland areas. These problems were addressed by quantitatively examining historical hydrographic surveys. The data from five hydrographic surveys, made from 1867 to 1990, were analyzed using surface modeling software to determine long-term changes in the sediment system of Suisun Bay and surrounding areas. A surface grid displaying the bathymetry was created for each survey period, and the bathymetric change between survey periods was computed by differencing these grids. Patterns and volumes of erosion and deposition, sedimentation rates, and shoreline changes were derived from the resulting change grids. Approximately 115 million cubic meters of sediment were deposited in the Suisun Bay area from 1867 to 1887, the majority of which was debris from hydraulic gold mining in the Sierra Nevada. Just under two-thirds of the area of the study site was depositional during this time period, while less than one-third of it was erosional. However, over the entire study period, the Suisun Bay area lost sediment, indicating that a large amount of erosion occurred from1887 to 1990. In fact, this area lost sediment during each of the change periods between 1887 and 1990. Because erosion and deposition are processes that may vary over space and time, further analyses of more specific areas were done to examine spatial and temporal patterns. The change in the Suisun Bay area from being a largely depositional environment to an erosional one is the result of a combination of several factors. These factors include the regulation and subsequent cessation of hydraulic mining practices, and the increase in flood control and water distribution projects that have decreased sediment supply to the bay by reducing the frequency and duration of peak flow conditions. Another pattern shown by the

  15. Modelling residence-time response to freshwater input in Apalachicola Bay, Florida, USA

    NASA Astrophysics Data System (ADS)

    Huang, Wenrui; Spaulding, M.

    2002-10-01

    Residence time of an estuary can be used to estimate the rate of removal of freshwater and pollutants from river inflow. In this study, a calibrated three-dimensional hydrodynamic model was used to determine residence time in response to the change of freshwater input in Apalachicola Bay. The bay is about 40 km long and 7 km wide, with an average 3 m water depth. Through hydrodynamic model simulations, the spatial and temporal salinity and the total freshwater volume in the bay were calculated. Then the freshwater fraction method was used to estimate the residence time. Results indicate that the residence time in Apalachicola Bay typically ranges between 3 and 10 days for the daily freshwater input ranging from 177 m3/s to 4561 m3/s. Regression analysis of model results shows that an exponential regression equation can be used to correlate the estuarine residence time to changes of freshwater input.

  16. Experiences with the Bay Area Gigabit Network Testbed

    NASA Technical Reports Server (NTRS)

    Johnson, Marjory J.

    1995-01-01

    The Bay Area Gigabit Network Testbed (BAGNet) is a high-performance ATM (155 Mbps) testbed located within the San Francisco Bay Area in northern California. BAGNet is a metropolitan-area network, spanning an area of approximately 50 square miles. There are fifteen sites participating in the testbed, with up to four hosts per site. Although BAGNet is an applications-oriented testbed, much of our effort has been directed towards getting the testbed running and understanding the factors that impact performance of an ATM network. We present some of our experiences in this paper.

  17. Possible origin of the high incidence of Clostridium botulinum type E in an inland bay (Green Bay of Lake Michigan).

    PubMed

    Bott, T L; Johnson, J; Foster, E M; Sugiyama, H

    1968-05-01

    Bottom and shoreline sediments of Green Bay, northern Lake Michigan, and rivers of the Green Bay drainage basin, as well as soils of the surrounding land mass, were examined for Clostridium botulinum type E. Detection was based on identification of type E toxin in enrichment cultures and was influenced by many factors. Testing smaller amounts of sample in multiple cultures was more productive than examining large inocula in fewer cultures. Incubation at 30 C was unsatisfactory, but 14 days at 20 C or 7 days at 25 C gave good results. Mild heating (60 C for 30 min) of specimens reduced the incidence of positive findings. Freezing enrichment cultures prior to testing for toxicity eliminated many nonbotulinal toxic substances that killed mice. A control culture inoculated with type E spores was employed to show whether a specimen contained factors which could mask the presence of type E. Samples from 708 stations were tested in 2,446 cultures. Type E was found in nearly all underwater specimens of Green Bay and northern Lake Michigan but was present less frequently in samples taken along their shores. The incidence was still lower in the rivers emptying into Green Bay with the organism being rare on the shores of these rivers and in the soils of the land mass proper. Samples from the upper reaches of the rivers practically never contained type E. Runoff could deposit type E spores in Green Bay, but this is not considered to be the major factor in the high incidence of the organism. Multiplication in the bay itself is indicated.

  18. Analysis of Trends in Fish Assemblages in Narragansett Bay, RI/MA

    EPA Science Inventory

    Estuarine fish are highly valued resources that are affected by several factors, including climate, landscape, pollution, and fishing pressure. Here, we examine patterns of variability in estuarine fish assemblages in Narragansett Bay, an estuary located in Rhode Island and Mass...

  19. Impact evaluation of the industrial activities in the Bay of Bakar (Adriatic Sea, Croatia): recent benthic foraminifera and heavy metals.

    PubMed

    Popadić, Adriana; Vidović, Jelena; Cosović, Vlasta; Medaković, Davorin; Dolenec, Matej; Felja, Igor

    2013-11-15

    The Bay of Bakar is one of the most heavily polluted bays at the Eastern Adriatic. Three major industrial companies potentially endanger the bay. The concentration of major, minor and trace elements in surface sediments from thirteen stations was discussed in relation to the sediment type and foraminiferal assemblages. The distribution of major elements in the bay is influenced by geological nature of surroundings. Heavy metal distribution depends on pollution sources and on amount of mud fraction: fine-grained sediments are enriched by them in comparison with coarse-grained ones. Different sediment quality criteria complicate the pollution assessment in the bay. Heavy metal concentrations generally fall into allowed depositional values for marine environments; only area in front of the coke plant and the City of Bakar harbor is heavily polluted. Stress-tolerant foraminiferal species dominate at stations with higher concentrations of heavy metals and coarse-grained sediments consist of larger number of epifaunal taxa.

  20. Management case study: Tampa Bay, Florida

    USGS Publications Warehouse

    Morrison, Gerold; Greening, Holly; Yates, Kimberly K.; Wolanski, Eric; McLusky, Donald S.

    2011-01-01

    Tampa Bay, Florida, USA, is a shallow, subtropical estuary that experienced severe cultural eutrophication between the 1940s and 1980s, a period when the human population of its watershed quadrupled. In response, citizen action led to the formation of a public- and private-sector partnership (the Tampa Bay Estuary Program), which adopted a number of management objectives to support the restoration and protection of the bay’s living resources. These included numeric chlorophyll a and water-clarity targets, as well as long-term goals addressing the spatial extent of seagrasses and other selected habitat types, to support estuarine-dependent faunal guilds. Over the past three decades, nitrogen controls involving sources such as wastewater treatment plants, stormwater conveyance systems, fertilizer manufacturing and shipping operations, and power plants have been undertaken to meet these and other management objectives. Cumulatively, these controls have resulted in a 60% reduction in annual total nitrogen (TN) loads relative to earlier worse-case (latter 1970s) conditions. As a result, annual water-clarity and chlorophyll a targets are currently met in most years, and seagrass cover measured in 2008 was the highest recorded since 1950. Factors that have contributed to the observed improvements in Tampa Bay over the past several decades include the following: (1) Development of numeric, science-based water-quality targets to meet a long-term goal of restoring seagrass acreage to 1950s levels. Empirical and mechanistic models found that annual average chlorophyll a concentrations were a primary manageable factor affecting light attenuation. The models also quantified relationships between TN loads, chlorophyll a concentrations, light attenuation, and fluctuations in seagrass cover. The availability of long-term monitoring data, and a systematic process for using the data to evaluate the effectiveness of management actions, has allowed managers to track progress and

  1. 33 CFR 165.1185 - Regulated Navigation Area; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... (LHG)” is a liquid containing one or more of the products listed in Table 127.005 of 33 CFR 127.005... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Regulated Navigation Area; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River,...

  2. 33 CFR 165.1185 - Regulated Navigation Area; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... (LHG)” is a liquid containing one or more of the products listed in Table 127.005 of 33 CFR 127.005... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Regulated Navigation Area; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin River,...

  3. 75 FR 67620 - Temporary Security Zones; San Francisco Bay, Delta Ports, Monterey Bay and Humboldt Bay, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-03

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA87 Temporary Security Zones; San Francisco Bay, Delta Ports... Coast Guard is establishing temporary security zones on the navigable waters of San Francisco Bay, Delta...; Increase of Security Zones under 33 CFR 165.1183 from 100 to 500 yards; San Francisco Bay, Delta...

  4. 33 CFR 100.919 - International Bay City River Roar, Bay City, MI.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false International Bay City River Roar, Bay City, MI. 100.919 Section 100.919 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Bay City River Roar, Bay City, MI. (a) Regulated Area. A regulated area is established to include...

  5. 33 CFR 100.919 - International Bay City River Roar, Bay City, MI.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false International Bay City River Roar, Bay City, MI. 100.919 Section 100.919 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Bay City River Roar, Bay City, MI. (a) Regulated Area. A regulated area is established to include...

  6. 33 CFR 100.919 - International Bay City River Roar, Bay City, MI.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false International Bay City River Roar, Bay City, MI. 100.919 Section 100.919 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Bay City River Roar, Bay City, MI. (a) Regulated Area. A regulated area is established to include...

  7. 77 FR 18739 - Safety Zone; Bay Swim V, Presque Isle Bay, Erie, PA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-03-28

    ... the January 17, 2008, issue of the Federal Register (73 FR 3316). Public Meeting We do not now plan to... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Bay Swim V, Presque Isle Bay, Erie, PA... is intended to restrict vessels from a portion of the Presque Island Bay during the Bay Swim...

  8. Facility Layout Problems Using Bays: A Survey

    NASA Astrophysics Data System (ADS)

    Davoudpour, Hamid; Jaafari, Amir Ardestani; Farahani, Leila Najafabadi

    2010-06-01

    Layout design is one of the most important activities done by industrial Engineers. Most of these problems have NP hard Complexity. In a basic layout design, each cell is represented by a rectilinear, but not necessarily convex polygon. The set of fully packed adjacent polygons is known as a block layout (Asef-Vaziri and Laporte 2007). Block layout is divided by slicing tree and bay layout. In bay layout, departments are located in vertical columns or horizontal rows, bays. Bay layout is used in real worlds especially in concepts such as semiconductor and aisles. There are several reviews in facility layout; however none of them focus on bay layout. The literature analysis given here is not limited to specific considerations about bay layout design. We present a state of art review for bay layout considering some issues such as the used objectives, the techniques of solving and the integration methods in bay.

  9. NASA Satellites Aid in Chesapeake Bay Recovery

    NASA Video Gallery

    By studying the landscape around the Chesapeake Bay, NASA spacecrafts are helping land managers figure out how to battle the harmful pollutants that have added to the destruction of the bay's once ...

  10. Hypoxia-Inducible Factor Pathway Inhibition Resolves Tumor Hypoxia and Improves Local Tumor Control After Single-Dose Irradiation

    SciTech Connect

    Helbig, Linda; Koi, Lydia; Brüchner, Kerstin; Gurtner, Kristin; Hess-Stumpp, Holger; Unterschemmann, Kerstin; Pruschy, Martin; and others

    2014-01-01

    Purpose: To study the effects of BAY-84-7296, a novel orally bioavailable inhibitor of mitochondrial complex I and hypoxia-inducible factor 1 (HIF-1) activity, on hypoxia, microenvironment, and radiation response of tumors. Methods and Materials: UT-SCC-5 and UT-SCC-14 human squamous cell carcinomas were transplanted subcutaneously in nude mice. When tumors reached 4 mm in diameter BAY-84-7296 (Bayer Pharma AG) or carrier was daily administered to the animals. At 7 mm tumors were either excised for Western blot and immunohistologic investigations or were irradiated with single doses. After irradiation animals were randomized to receive BAY-84-7296 maintenance or carrier. Local tumor control was evaluated 150 days after irradiation, and the dose to control 50% of tumors (TCD{sub 50}) was calculated. Results: BAY-84-7296 decreased nuclear HIF-1α expression. Daily administration of inhibitor for approximately 2 weeks resulted in a marked decrease of pimonidazole hypoxic fraction in UT-SCC-5 (0.5% vs 21%, P<.0001) and in UT-SCC-14 (0.3% vs 19%, P<.0001). This decrease was accompanied by a significant increase in fraction of perfused vessels in UT-SCC-14 but not in UT-SCC-5. Bromodeoxyuridine and Ki67 labeling indices were significantly reduced only in UT-SCC-5. No significant changes were observed in vascular area or necrosis. BAY-84-7296 before single-dose irradiation significantly decreased TCD{sub 50}, with an enhancement ratio of 1.37 (95% confidence interval [CI] 1.13-1.72) in UT-SCC-5 and of 1.55 (95% CI 1.26-1.94) in UT-SCC-14. BAY-84-7296 maintenance after irradiation did not further decrease TCD{sub 50}. Conclusions: BAY-84-7296 resulted in a marked decrease in tumor hypoxia and substantially reduced radioresistance of tumor cells with the capacity to cause a local recurrence after irradiation. The data suggest that reduction of cellular hypoxia tolerance by BAY-84-7296 may represent the primary biological mechanism underlying the observed enhancement of

  11. Dividing Fractions: A Pedagogical Technique

    ERIC Educational Resources Information Center

    Lewis, Robert

    2016-01-01

    When dividing one fraction by a second fraction, invert, that is, flip the second fraction, then multiply it by the first fraction. To multiply fractions, simply multiply across the denominators, and multiply across the numerators to get the resultant fraction. So by inverting the division of fractions it is turned into an easy multiplication of…

  12. [Ecological characteristics of phytoplankton in Shenzhen Bay].

    PubMed

    Sun, Jin-Shui; Wai, Onyx Wing-Hong; Dai, Ji-Cui; Ni, Jin-Ren

    2010-01-01

    Based on the data of surface phytoplankton investigated by Hong Kong Environmental Protection Department in Shenzhen Bay in 2006, variation characteristics of phytoplankton communities and the relationship between the phytoplankton diversity indices and environmental factors were analyzed in the present paper. Results showed that a total of 27 genera and 34 species of phytoplankton were identified. Of these, 18 were diatoms (52.94%), 10 were dinoflagellates (29.41%), 6 were from other minor groups (17.65%). The cell abundance was estimated to be from 2.13 x 10(6) to 4.15 x 10(6) cells/L, with an average of 2.92 x 10(6) cells/L. The maximum cell abundance appeared in the autumn (October), followed in spring (May). The cell abundance showed double abundance peaks annually. The cell abundance of phytoplankton decreased from the middle bay to the bay mouth. In the marine area, the diversity index of the phytoplankton ranged from 0.76 to 2.52; the evenness of phytoplankton ranged from 0.29 to 0.74; the diversity and evenness of phytoplankton community were rather low, which indicated that the relative abundances of the species diverged from evenness, phytoplankton community were not steady, and only few dominant species increased rapidly. The species richness index ranged from 0.57 to 2.17, the high eutrophic water body caused the species richness index declined. Better relationship was found between phytoplankton diversity indices and nutrient, salinity, dissolved oxygen. PMID:20329517

  13. 33 CFR 167.100 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Bay, RI, and Buzzards Bay, MA: General. 167.100 Section 167.100 Navigation and Navigable Waters COAST... approaches to Narragansett Bay, RI, and Buzzards Bay, MA: General. The traffic separation scheme in the approaches to Narragansett Bay, RI, and Buzzards Bay, MA, consists of four parts: Two precautionary areas...

  14. Acid rain said to threaten Bay

    SciTech Connect

    Not Available

    1988-04-29

    A report on April 25, 1988 by the Environmental Defense Fund blames acid rain for pollution of Chesapeake Bay. The nitrates in the rain are reported to account for 25% of the nitrogen load of the bay. This increases the acidity of the bay, thereby acting as a fertilizer to promote algal growth. It is postulated that acid rain contributes as much nitrogen to the bay as point sources, which include raw sewage and industrial plants.

  15. Using Bayes to get the most out of non-significant results

    PubMed Central

    Dienes, Zoltan

    2014-01-01

    No scientific conclusion follows automatically from a statistically non-significant result, yet people routinely use non-significant results to guide conclusions about the status of theories (or the effectiveness of practices). To know whether a non-significant result counts against a theory, or if it just indicates data insensitivity, researchers must use one of: power, intervals (such as confidence or credibility intervals), or else an indicator of the relative evidence for one theory over another, such as a Bayes factor. I argue Bayes factors allow theory to be linked to data in a way that overcomes the weaknesses of the other approaches. Specifically, Bayes factors use the data themselves to determine their sensitivity in distinguishing theories (unlike power), and they make use of those aspects of a theory’s predictions that are often easiest to specify (unlike power and intervals, which require specifying the minimal interesting value in order to address theory). Bayes factors provide a coherent approach to determining whether non-significant results support a null hypothesis over a theory, or whether the data are just insensitive. They allow accepting and rejecting the null hypothesis to be put on an equal footing. Concrete examples are provided to indicate the range of application of a simple online Bayes calculator, which reveal both the strengths and weaknesses of Bayes factors. PMID:25120503

  16. BAY REGION ATMOSPHERIC CHEMISTRY EXPERIMENT (BRACE)

    EPA Science Inventory

    The Tampa Bay Estuary Program (TBEP) was formed in 1991 to assist the community in developing a comprehensive plan to restore and protect Tampa Bay. The ecological indicator of the health of the Bay is the coverage of seagrasses, historically in decline, which are important to...

  17. 33 CFR 117.622 - West Bay

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false West Bay 117.622 Section 117.622 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.622 West Bay The draw of the West Bay Bridge, mile...

  18. Potamocorbula amurensis discovered in San Francisco Bay

    USGS Publications Warehouse

    Schemel, Laurence E.

    1989-01-01

    The small Asian clam, Potamocorbula amurensis, is now a major component of benthic communities in most areas of northern San Francisco Bay and some areas of South Bay. Because of its wide tolerance of salinity and other environmental variables and its high abundance in many areas, benthic ecologists believe this recent invasion may represent a major and permanent change in the bay system.

  19. 33 CFR 117.871 - Coos Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad...

  20. 33 CFR 117.871 - Coos Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad...

  1. 33 CFR 117.622 - West Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false West Bay. 117.622 Section 117.622 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.622 West Bay. The draw of the West Bay Bridge, mile...

  2. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Michigan Street Bridge, mile 4.3 at Sturgeon Bay, shall open as follows: (1) From March 15 through December... draw of the Bayview (SR 42/57) Bridge, mile 3.0 at Sturgeon Bay, shall open as follows: (1) From March... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Sturgeon Bay. 117.1101...

  3. 33 CFR 117.622 - West Bay

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false West Bay 117.622 Section 117.622 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.622 West Bay The draw of the West Bay Bridge, mile...

  4. 33 CFR 117.871 - Coos Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Coos Bay. 117.871 Section 117.871 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.871 Coos Bay. The draw of the Port of Coos Bay railroad...

  5. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Michigan Street Bridge, mile 4.3 at Sturgeon Bay, shall open as follows: (1) From March 15 through December... draw of the Bayview (SR 42/57) Bridge, mile 3.0 at Sturgeon Bay, shall open as follows: (1) From March... passage. (c) The draw of the Maple-Oregon Bridge at Mile 4.17 at Sturgeon Bay, shall operate as...

  6. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sturgeon Bay. 117.1101 Section... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The draw of the Michigan Street Bridge, mile 4.3 at Sturgeon Bay, shall open as follows: (1) From March 15 through...

  7. South San Francisco Bay, California

    USGS Publications Warehouse

    Dartnell, Peter; Gibbons, Helen

    2007-01-01

    View eastward. Elevations in mapped area color coded: purple (approx 15 m below sea level) to red-orange (approx 90 m above sea level). South San Francisco Bay is very shallow, with a mean water depth of 2.7 m (8.9 ft). Trapezoidal depression near San Mateo Bridge is where sediment has been extracted for use in cement production and as bay fill. Land from USGS digital orthophotographs (DOQs) overlaid on USGS digital elevation models (DEMs). Distance across bottom of image approx 11 km (7 mi); vertical exaggeration 1.5X.

  8. Bayes' postulate for trinomial trials

    NASA Astrophysics Data System (ADS)

    Diniz, M. A.; Polpo, A.

    2012-10-01

    In this paper, we discuss Bayes' postulate and its interpretation. We extend the binomial trial method proposed by de Finetti [1] to trinomial trials, for which we argue that the consideration of equiprobability a priori for the possible outcomes of the trinomial trials implies that the parameter vector has Dirichlet(1,1) as prior. Based on this result, we agree with Stigler [2] in that the notion in Bayes' postulate stating "absolutely know nothing" is related to the possible outcomes of an experiment and not to "non-information" about the parameter.

  9. Mobile Bay turbidity plume study

    NASA Technical Reports Server (NTRS)

    Crozier, G. F.

    1976-01-01

    Laboratory and field transmissometer studies on the effect of suspended particulate material upon the appearance of water are reported. Quantitative correlations were developed between remotely sensed image density, optical sea truth data, and actual sediment load. Evaluation of satellite image sea truth data for an offshore plume projects contours of transmissivity for two different tidal phases. Data clearly demonstrate the speed of change and movement of the optical plume for water patterns associated with the mouth of Mobile bay in which relatively clear Gulf of Mexico water enters the bay on the eastern side. Data show that wind stress in excess of 15 knots has a marked impact in producing suspended sediment loads.

  10. A Creek to Bay Biological Assessment in Oakland, California

    NASA Astrophysics Data System (ADS)

    Ahumada, E.; Ramirez, N.; Lopez, A.; Avila, M.; Ramirez, J.; Arroyo, D.; Bracho, H.; Casanova, A.; Pierson, E.

    2011-12-01

    In 2007, the Surface Water Ambient Monitoring Program (SWAMP) assessed the impact of trash on water quality in the Peralta Creek which is located in the Fruitvale district of Oakland, CA. This 2011 follow-up study will take further steps in evaluating the physical and biological impacts of pollution and human development on Peralta Creek and in the San Leandro Bay, where the Creek empties into the larger San Francisco Bay estuary. This study will utilize two forms of biological assessment in order to determine the level of water quality and ecosystem health of Peralta Creek and San Leandro Bay in Oakland, California. A Rapid Bioassesment Protocal (RBP) will be used as the method of biological assessment for Peralta Creek. RBP uses a biotic index of benthic macroinvertebrates to provide a measure of a water body's health. Larval trematodes found in two mud snails (Ilynassa obsoleta and Cerithidea californica) will be used to evaluate the health of the San Leandro Bay. Due to the complex life cycle of trematodes, the measure of trematode diversity and richness in host species serves as an indicator of estuarine health (Huspeni 2005). We have completed the assessment of one section of Peralta Creek, located at 2465 34th Avenue, Oakland, CA 94601. Abundance results indicate a moderately healthy creek because there were high levels of pollution tolerant benthic macroinvertebrates. The tolerant group of benthic macroinvertebrates includes such organisms as flatworms, leeches, and scuds. This is possibly due to this section of the creek being pumped up to the surface from culverts impacting the macroinvertebrate's life cycle. Another contributing factor to creek health is the amount of organic debris found in the creek, which inhibits the flow and oxygenation of the water, allowing for more pollution tolerant aquatic insects to persist. Further investigation is being conducted to fully assess the Peralta Creek watershed; from the preliminary results one can surmise that

  11. Stable isotope tracing of anaerobic methane oxidation in the gassy sediments of Eckernfoerde Bay, German Baltic Sea

    SciTech Connect

    Martens, C.S.; Albert, D.B.; Alperin, M.J.

    1999-07-01

    Methane concentrations in the pore waters of Eckernfoerde Bay in the German Baltic Sea generally reach gas bubble saturation values within the upper meter of the sediment column. The depth at which saturation occurs is controlled by a balance between rates of methane production, consumption (oxidation), and transport. The relative importance of anaerobic methane oxidation (AMO) in controlling dissolved and gas bubble methane distributions in the bay's sediments is indirectly revealed through methane concentration versus depth profiles, depth variations in the stable C and H isotope composition of methane, and the C isotope composition of total dissolved inorganic carbon ({Sigma}CO{sub 2}). Direct radiotracer measurements indicate that AMO rates of over 15 mM/yr are focused at the base of the sulfate reduction zone. Diagenetic equations that describe the depth destructions of the {delta}{sup 13}C and {delta}D values of methane reproduce isotopic shifts observed throughout the methane oxidation zone and are best fit with kinetic isotope fractionation factors of 1.012 {+-} 0.001 and 1.120 {plus{underscore}minus} 0.020 respectively.

  12. Assessing the trace metal pollution in the sediments of Mahshahr Bay, Persian Gulf, via a novel pollution index.

    PubMed

    Vaezi, A R; Karbassi, A R; Fakhraee, M

    2015-10-01

    Sediment samples were collected from the Petrochemical Special Economic Zone of Mahshahr Bay, Persian Gulf, and analyzed for possible trace metal contamination by means of a chemical partitioning method. The heavy metal contents in the sediments follow the order of Al > Sr > Mn > Zn > Ni > Ba > Cr > Cu > As > Co. The degree of sediment contamination was evaluated using pollution load index (PLI), modified degree of contamination (mC d), geo-accumulation index (I geo), and enrichment factor (EF). All these indices compare present concentrations of metals to their background levels in crust and shale. In a specific area with high geological background like Mahshahr Bay, such a comparison may lead to erroneous conclusions. Due to the remarkable contribution of lithogenous fraction, as the natural component, to the bulk concentration of trace metals in the sediments of such an area, assessment of chemical hazard to the surrounding aquatic environment should not be carried out through traditional approaches. In the present study, anthropogenic portion of the metals was determined through one-step chemical sequential extraction and lithogenous portion substituted for the mean crust and shale levels in the new pollution index (RIAquatic). PLI, mC d, and I geo revealed overall low values, but EF, pollution index (I POLL), and newly developed pollution index were relatively high for all samples.

  13. Tarpum Bay, Bahamas

    NASA Technical Reports Server (NTRS)

    2002-01-01

    In this ASTER image the features that look like folded material are carbonate sand dunes in the shallow waters of Tarpum Bay, southwest of Eleuthera Island in the Bahamas. The sand making up the dunes comes from the erosion of limestone coral reefs, and has been shaped into dunes by ocean currents.

    This image was acquired on May 12, 2002 by the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) on NASA's Terra satellite. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet.

    ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products.

    The broad spectral coverage and high spectral resolution of ASTER will provide scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop stress; determining cloud morphology and physical properties; wetlands evaluation; thermal pollution monitoring; coral reef degradation; surface temperature mapping of soils and geology; and measuring surface heat balance. Dr. Anne Kahle at NASA's Jet Propulsion Laboratory, Pasadena, California, is the U.S. Science team leader; Bjorn Eng of JPL is the project manager. The Terra mission is part of NASA's Earth Science Enterprise, a long- term research effort to understand and protect our home planet. Through the study of Earth, NASA will help to provide sound science to policy and economic decision-makers so as to better life here, while developing the

  14. Assessment of concentration, bioaccumulation and sources of polycyclic aromatic hydrocarbons in zooplankton of Chabahar Bay.

    PubMed

    Ziyaadini, Morteza; Mehdinia, Ali; Khaleghi, Leila; Nassiri, Mahmoud

    2016-06-15

    The amounts and sources of polycyclic aromatic hydrocarbons (PAHs) and their bioaccumulation factors (BAFs) in the zooplankton community of Chabahar Bay were investigated. The highest amounts of total PAHs (tPAHs) in the water and zooplankton samples were 62.2ngL(-1) and 1478.6ngg(-1) dry weights, in near the Shahid Beheshti Port and desalination, respectively. The greatest amount of BAF (51,780) was obtained in the entry of Bay, and it was related to the phenanthrene accumulation. Using molecular ratio, the results showed that the major input source of PAH compounds in zooplankton of Chabahar Bay was pyrolytic (fuel) source.

  15. Heavy metal pollution status in surface sediments of the coastal Bohai Bay.

    PubMed

    Gao, Xuelu; Chen, Chen-Tung Arthur

    2012-04-15

    Bohai Bay, the second largest bay of Bohai Sea, largely due to the huge amount of pollutants discharged into it annually and its geohydrologic condition, is considered to be one of the most polluted marine areas in China. To slow down, halt and finally reverse the environmental deterioration of Bohai Sea, some researchers have proposed to connect it with Jiaozhou Bay in the western coast of Southern Yellow Sea by digging an interbasin canal through Shandong Peninsula. In order to assess the heavy metal pollution and provide background information for such a large geoengineering scheme, surface sediments from 42 stations covering both riverine and marine regions of the northwestern coast of Bohai Bay were analyzed for heavy metal content and fractionation (Cd, Cr, Cu, Ni, Pb and Zn). Three empirically derived sediment quality guidelines were used to assess the pollution extent of these metals. The studied metals had low mobility except for Cd at all stations and Zn at some riverine stations. Although a high mobility of Cd was observed, it could hardly cause a bad effect on the environment owing to its low total concentrations. Anthropogenic influence on the accumulation of studied heavy metals in sediments of Bohai Bay was obvious, but their contents were relatively lower to date comparing with some other marine coastal areas that receive important anthropogenic inputs. Taking as a whole, surface sediments of northwestern Bohai Bay had a 21% probability of toxicity based on the mean effects range-median quotient.

  16. (Carbon isotope fractionation inplants)

    SciTech Connect

    O'Leary, M.H.

    1990-01-01

    The objectives of this research are: To develop a theoretical and experimental framework for understanding isotope fractionations in plants; and to develop methods for using this isotope fractionation for understanding the dynamics of CO{sub 2} fixation in plants. Progress is described.

  17. The Future of Fractions

    ERIC Educational Resources Information Center

    Usiskin, Zalman P.

    2007-01-01

    In the 1970s, the movement to the metric system (which has still not completely occurred in the United States) and the advent of hand-held calculators led some to speculate that decimal representation of numbers would render fractions obsolete. This provocative proposition stimulated Zalman Usiskin to write "The Future of Fractions" in 1979. He…

  18. Seasonal/Yearly Salinity Variations in San Francisco Bay

    USGS Publications Warehouse

    Peterson, David H.; Cayan, Daniel R.; Dettinger, Michael D.; DiLeo, Jeanne Sandra; Hager, Stephen E.; Knowles, Noah; Nichols, Frederic H.; Schemel, Laurence E.; Smith, Richard E.; Uncles, Reginald J.

    1995-01-01

    The ability of resource agencies to manage fish, wildlife and freshwater supplies of San Francisco Bay estuary requires an integrated knowledge of the relations between the biota and their physical environment. A key factor in these relations is the role of salinity in determining both the physical and the biological character of the estuary. The saltiness of the water, and particularly its seasonal and interannual patterns of variability, affects which aquatic species live where within the estuary. Salinity also determines where water can and cannot be diverted for human consumption and irrigated agriculture, and plays a role in determining the capacity of the estuary to cleanse itself of wastes. In short, salinity is a fundamental property of estuarine physics and chemistry that, in turn, determines the biological characteristics of each estuary. Freshwater is a major control on estuarine salinity. Most freshwater supplied to the Bay is from river flow through the Delta, which is primarily runoff from the Sierra Nevada. Most contaminants in San Francisco Bay are from the Sacramento/San Joaquin Valley and the local watershed around the Bay rather than the sea or atmosphere. Land is the primary source of freshwater and freshwater serves as a tracer of land-derived substances such as the trace metals (copper, lead and selenium), pesticides and plant nutrients (nitrate and phosphate). The U.S. Geological Survey is collaborating with other agencies and institutions in studying San Francisco Bay salinity using field observations and numerical simulations to define the physical processes that control salinity. The issues that arise from salinity fluctuations, however, differ in the northern and southern parts of the bay. In North Bay we need to know how salinity responds to freshwater flow through the Sacramento/San Joaquin Delta; this knowledge will benefit water managers who determine how much delta flow is needed a) to protect freshwater supplies for municipal water

  19. Tampa Bay Ecosystem Services webpage

    EPA Science Inventory

    Public website describing research on the large-scale physical, chemical, and biological dynamics of coastal wetlands and estuaries, with emphasis on the Gulf of Mexico. Hyperlinks direct users to mapped ecosystem services of interest and value to Tampa Bay area residents, and i...

  20. State of the Chesapeake Bay

    SciTech Connect

    Mackiernan, G.B. )

    1990-09-01

    The US EPA undertook a six year study of the Chesapeake Bay-the US's largest estuary, as an example of the plight of estuarine and coastal waters where population growth and development, alteration of habitats, and discharge of pollutants have resulted in degrading environmental quality and productivity. This article discusses some of the results of the EPA's study.

  1. The outflow of radionuclides from Novaya Zemlya bays--modeling and monitoring strategies.

    PubMed

    Harms, I H; Povinec, P P

    1999-09-30

    Hydrodynamic model results are used to evaluate possible monitoring strategies for a continuous survey of underwater dump sites. The Hamburg Shelf Ocean Model (HAMSOM) is applied to Abrosimov Bay and forced with realistic, transient wind fields and air temperatures. The three-dimensional circulation model is coupled to a dynamic-thermodynamic ice model that accounts for surface heat fluxes, fractional ice cover and ice thickness. Model results show significant variations in the bay circulation due to a pronounced seasonality in the wind forcing and the ice cover. The circulation is weakest in early summer when wind speeds are low and the ice still covers most parts of the bay. In autumn, circulation and flushing of the bay is most enhanced, due to increasing wind speeds and the absence of an ice cover. Dispersion scenarios were carried out assuming a leakage at dumped objects. During most of the year the obtained tracer concentrations in the bay are higher in the upper layers than close to the bottom, indicating an outflow at the surface and a compensatory inflow below. This general pattern is only reversed during spring and early summer, when the wind directions change. Since ice problems make it almost impossible to monitor surface waters or even the whole water column in a shallow bay, the only way to install a monitoring system, is at the bottom of the bay, as close as possible to dumped objects. Data transmission via satellite or radio could be realized from a small station located on the bay's edge. PMID:10568276

  2. Fractional calculus in bioengineering.

    PubMed

    Magin, Richard L

    2004-01-01

    Fractional calculus (integral and differential operations of noninteger order) is not often used to model biological systems. Although the basic mathematical ideas were developed long ago by the mathematicians Leibniz (1695), Liouville (1834), Riemann (1892), and others and brought to the attention of the engineering world by Oliver Heaviside in the 1890s, it was not until 1974 that the first book on the topic was published by Oldham and Spanier. Recent monographs and symposia proceedings have highlighted the application of fractional calculus in physics, continuum mechanics, signal processing, and electromagnetics, but with few examples of applications in bioengineering. This is surprising because the methods of fractional calculus, when defined as a Laplace or Fourier convolution product, are suitable for solving many problems in biomedical research. For example, early studies by Cole (1933) and Hodgkin (1946) of the electrical properties of nerve cell membranes and the propagation of electrical signals are well characterized by differential equations of fractional order. The solution involves a generalization of the exponential function to the Mittag-Leffler function, which provides a better fit to the observed cell membrane data. A parallel application of fractional derivatives to viscoelastic materials establishes, in a natural way, hereditary integrals and the power law (Nutting/Scott Blair) stress-strain relationship for modeling biomaterials. In this review, I will introduce the idea of fractional operations by following the original approach of Heaviside, demonstrate the basic operations of fractional calculus on well-behaved functions (step, ramp, pulse, sinusoid) of engineering interest, and give specific examples from electrochemistry, physics, bioengineering, and biophysics. The fractional derivative accurately describes natural phenomena that occur in such common engineering problems as heat transfer, electrode/electrolyte behavior, and sub

  3. Fractional calculus in bioengineering.

    PubMed

    Magin, Richard L

    2004-01-01

    Fractional calculus (integral and differential operations of noninteger order) is not often used to model biological systems. Although the basic mathematical ideas were developed long ago by the mathematicians Leibniz (1695), Liouville (1834), Riemann (1892), and others and brought to the attention of the engineering world by Oliver Heaviside in the 1890s, it was not until 1974 that the first book on the topic was published by Oldham and Spanier. Recent monographs and symposia proceedings have highlighted the application of fractional calculus in physics, continuum mechanics, signal processing, and electromagnetics, but with few examples of applications in bioengineering. This is surprising because the methods of fractional calculus, when defined as a Laplace or Fourier convolution product, are suitable for solving many problems in biomedical research. For example, early studies by Cole (1933) and Hodgkin (1946) of the electrical properties of nerve cell membranes and the propagation of electrical signals are well characterized by differential equations of fractional order. The solution involves a generalization of the exponential function to the Mittag-Leffler function, which provides a better fit to the observed cell membrane data. A parallel application of fractional derivatives to viscoelastic materials establishes, in a natural way, hereditary integrals and the power law (Nutting/Scott Blair) stress-strain relationship for modeling biomaterials. In this review, I will introduce the idea of fractional operations by following the original approach of Heaviside, demonstrate the basic operations of fractional calculus on well-behaved functions (step, ramp, pulse, sinusoid) of engineering interest, and give specific examples from electrochemistry, physics, bioengineering, and biophysics. The fractional derivative accurately describes natural phenomena that occur in such common engineering problems as heat transfer, electrode/electrolyte behavior, and sub

  4. Biological interference of optical backscatterance sensors in Tampa Bay, Florida

    USGS Publications Warehouse

    Schoellhamer, D.H.

    1993-01-01

    Optical backscatterance (OBS, D&A Instruments, Inc.1 1 Use of brand, firm, or trade names in this paper is for identification purposes only and does not constitute endorsement by the U.S. Geological Survey.) sensors for measuring suspended-solids concentrations have been deployed in Tampa Bay to monitor resuspension of bottom sediments. This paper describes biological factors that affected the OBS sensors deployed in Tampa Bay and discusses deployment strategies that minimize biological interference. Phytoplankton may interfere with the OBS sensors when the suspended-solids concentration is near or below the sensor response threshold. Fish swimming in front of the OBS sensors caused spikes in the OBS sensor output, so the median average was more appropriate than the mean average. An algal slime on the OBS sensors caused excessive backscatterance that dominated the backscatterance from suspended material. Because of the fouling problem, deployments were limited to less than a week, and OBS sensors were cleaned daily, if possible. Calibration of OBS sensors with water samples collected from Tampa Bay was satisfactory when biological interference was not significant. When properly deployed, the OBS sensors can successfully monitor sediment resuspension in Tampa Bay and similar subtropical estuaries. ?? 1993.

  5. Spatial variation of phytoplankton community structure in Daya Bay, China.

    PubMed

    Jiang, Zhao-Yu; Wang, You-Shao; Cheng, Hao; Zhang, Jian-Dong; Fei, Jiao

    2015-10-01

    Daya Bay is one of the largest and most important gulfs in the southern coast of China, in the northern part of the South China Sea. The phylogenetic diversity and spatial distribution of phytoplankton from the Daya Bay surface water and the relationship with the in situ water environment were investigated by the clone library of the large subunit of ribulose-1, 5-bisphosphate carboxylase (rbcL) gene. The dominant species of phytoplankton were diatoms and eustigmatophytes, which accounted for 81.9 % of all the clones of the rbcL genes. Prymnesiophytes were widely spread and wide varieties lived in Daya Bay, whereas the quantity was limited. The community structure of phytoplankton was shaped by pH and salinity and the concentration of silicate, phosphorus and nitrite. The phytoplankton biomass was significantly positively affected by phosphorus and nitrite but negatively by salinity and pH. Therefore, the phytoplankton distribution and biomass from Daya Bay were doubly affected by anthropic activities and natural factors.

  6. Spatially and Temporally Detailed Modeling of Water Quality in Narragansett Bay

    NASA Astrophysics Data System (ADS)

    Charlestra, L.; Dettmann, E. H.; Abdelrhman, M.

    2014-12-01

    Nutrient loading to Narragansett Bay has led to eutrophication, resulting in hypoxia and anoxia, finfish and shellfish kills, loss of seagrass, and reductions in the recreational and economic value of the Bay. We are developing a model that simulates the effects of external nutrient and hydrologic loading on water quality in Narragansett Bay. Extensive field monitoring programs and process studies by the Narragansett Bay Commission, Federal and State agencies, municipalities, and university groups have been measuring physical parameters, nutrient concentrations and other water quality parameters in the Bay and its tributaries, nutrient inputs from wastewater treatment facilities, and process kinetic parameters. We are using data for existing nutrient concentrations, river flow and wastewater treatment facility effluent flow to estimate nutrient loading for non-sampled days using the U.S. Geological Survey's Load Estimator (LOADEST) software. The time-variable data so generated will be used as input to the U.S. Environmental Protection Agency's WASPEUTRO model linked with a calibrated three-dimensional hydrodynamic model, the Environmental Fluid Dynamics Code (EFDC). The primary objectives of the modeling effort are to simulate the effects of nutrient loading on dissolved oxygen concentrations and chlorophyll-a, an important parameter for water clarity and seagrass viability, to estimate the sensitivity of the Bay to changes in nutrient loading and freshwater inflow, and to explore the potential effects of management actions and other factors such as climate change on these water quality parameters in the Bay.

  7. Assessment of the interconnection between Tampa Bay and the Floridan aquifer, Florida

    USGS Publications Warehouse

    Hutchinson, C.B.

    1983-01-01

    Factors that control interflow between Tampa Bay and the Floridan aquifer are assessed, both qualitatively and quantitatively, with emphasis on the impact of harbor improvement. Hydrogeologic units underlying the 350-square-mile bay include the surficial-sand aquifer, upper sand and clay confining bed, and limestone of the Floridan aquifer. The surficial aquifer and upper confining bed have been eroded away in several areas along the northern coast of the bay to directly expose the Floridan aquifer to saltwater. There also, the top of the aquifer is, has been, or will be exposed to saltwater in numerous channels dredged in the bay. Saltwater-freshwater relations indicate that the degree of bay-aquifer interconnection decreases from north to south. Saltwater intrusion is occurring along the coast of Tampa Bay, as indicated by reduction or reversal of potentiometric-surface gradients and increasing chloride concentrations in coastal monitoring wells. A computer model of ground-water flow developed for a 97-square-mile area was interrogated under five options of channelization and pumping. Model results indicate that the total impact of channelization upon bay-aquifer interconnection are expected to be small and may be imperceptible when considered over the long term with other unknown changes in climate and development. (USGS)

  8. Distinct patterns of picocyanobacterial communities in winter and summer in the Chesapeake Bay.

    PubMed

    Cai, Haiyuan; Wang, Kui; Huang, Sijun; Jiao, Nianzhi; Chen, Feng

    2010-05-01

    In the Chesapeake Bay, picocyanobacteria were usually 100-fold less abundant in winter than in summer. However, little is known about how picocyanobacterial populations shift between winter and summer in the bay. This is due mainly to undetectable winter picocyanobacterial populations in bacterial 16S rRNA clone libraries. In this study, the winter and summer picocyanobacterial populations in the bay were detected using picocyanobacterium-specific primers and were compared based on the analysis of rRNA internal transcribed spacer sequences. Temperature was found to be the dominant environmental factor controlling picocyanobacterial populations in the Chesapeake Bay. In the summer, marine cluster B Synechococcus dominated the upper bay, while a unique cluster, CB1 (marine cluster A [MC-A] Synechococcus), made up the vast majority in the middle and lower bay. In the winter, the picocyanobacteria shifted to completely different populations. Subclades CB6 and CB7, which belong to MC-A Synechococcus and Cyanobium, respectively, made up the entire winter picocyanobacterial populations in the bay. Interestingly, the winter members in subclade CB6 clustered closely with Synechococcus CC9311, a coastal strain known to have a greater capacity to sense and respond to changing environments than oceanic strains.

  9. STS-90 payload bay door closure in OPF Bay 3

    NASA Technical Reports Server (NTRS)

    1998-01-01

    The STS-90 Neurolab payload and two of the four Getaway Specials (GAS) await payload bay door closure in the orbiter Columbia today in Orbiter Processing Facility bay 3. Investigations during the Neurolab mission will focus on the effects of microgravity on the nervous system. The GAS container on the left contains the COLLisions Into Dust Experiment, or COLLIDE, which will study low velocity collisions between space-borne particles in an attempt to better understand planetary ring dynamics. The STS-90 mission is a joint venture of six space agencies and seven U.S. research agencies. Agencies participating in this mission include six institutes of the National Institutes of Health, the National Science Foundation, and the Office of Naval Research, as well as the space agencies of Canada, France, Germany, and Japan, and the European Space Agency (ESA).

  10. STS-90 payload bay door closure in OPF Bay 3

    NASA Technical Reports Server (NTRS)

    1998-01-01

    The STS-90 Neurolab payload and two of the four Getaway Specials (GAS) await payload bay door closure in the orbiter Columbia today in Orbiter Processing Facility bay 3. Investigations during the Neurolab mission will focus on the effects of microgravity on the nervous system. The mission is a joint venture of six space agencies and seven U.S. research agencies. Investigator teams from nine countries will conduct 31 studies in the microgravity environment of space. Other agencies participating in this mission include six institutes of the National Institutes of Health, the National Science Foundation, and the Office of Naval Research, as well as the space agencies of Canada, France, Germany, and Japan, and the European Space Agency (ESA).

  11. Polonium 210Po in the phytobenthos from Puck Bay.

    PubMed

    Skwarzec, B; Ulatowski, J; Strumińska, D I; Falandysz, J

    2003-04-01

    The aim of the work was to determine the 210Po content in phytobenthos species (seaweeds and angiosperms) from Puck Bay (southern Baltic). Alpha spectrometry was used to measure and calculate the activities and concentrations of polonium 210Po in the phytobenthos. The activity of 210Po in Puck Bay waters was determined to estimate the bioconcentration factors (BCF) of these plants. The 210Po concentration in water was estimated at 0.25 mBq dm(-3). The lowest polonium concentration in the phytobenthos was found in Cladophora rupestris (0.12 Bq kg(-1) wet wt.), the highest in Chara crinita (1.12 Bq kg(-1) wet wt.). Polonium is accumulated in these phytobenthos species; the bioconcentration factors (BCF) ranged from 450 to 4400.

  12. Stable Chlorine Isotope Fractionation

    NASA Astrophysics Data System (ADS)

    Sharp, Z.

    2006-12-01

    Chlorine isotope partitioning between different phases is not well understood. Pore fluids can have δ37Cl values as low as -8‰, with neoform sediments having strongly positive values. Most strikingly, volcanic gases have δ37Cl values that cover a range in excess of 14‰ (Barnes et al., this meeting). The large range is difficult to explain in terms of equilibrium fractionation, which, although calculated to be very large for Cl in different oxidation states, should be less than 2‰ between chloride species (Schauble et al., 2003, GCA). To address the discrepancy between Nature and theory, we have measured Cl isotope fractionation for selected equilibrium and disequilibrium experiments in order to identify mechanisms that might lead to large fractionations. 1) NaCl (s,l) NaCl (v): NaCl was sealed in an evacuated silica tube and heated at one end, causing vaporization and reprecipitation of NaCl (v) at the cool end of the tube. The fractionation is 0.2‰ at 700°C (halite-vapor) and 0.7‰ at 800°C (liquid-vapor), respectively. The larger fractionation at higher temperature may be related to equilibrium fractionation between liquid and gas vs. `stripping' of the solid in the lower T experiments. 2) Sodalite NaCl(l): Nepheline and excess NaCl were sealed in a Pt crucible at 825°C for 48 hrs producing sodalite. The measured newly-formed sodalite-NaCl fractionation is -0.2‰. 3) Volatilization of HCl: Dry inert gas was bubbled through HCl solutions and the vapor was collected in a downstream water trap. There was no fractionation for 12.4M HCl (HCl fuming) vapor at 25°C. For a 1 M boiling HCl solution, the HCl-vapor fractionation was ~9‰. The difference is probably related to the degree of dissociation in the acid, with HCl dissolved in water for the highly acidic solutions, and dissociated H3O+ and Cl- for lower concentrations. The HCl volatilization experiments are in contrast to earlier vapor-liquid experiments in NaCl-H2O system, where fractionation was

  13. Hydrogen isotopes in individual alkenones from the Chesapeake Bay estuary

    NASA Astrophysics Data System (ADS)

    Schwab, Valérie F.; Sachs, Julian P.

    2011-12-01

    Hydrogen isotope ratios of individual alkenones from haptophyte algae were measured in suspended particles and surface sediment from the Chesapeake Bay (CB) estuary, eastern USA, in order to determine their relationship to water δD values and salinity. δD values of four alkenones (MeC 37:2, MeC 37:3, EtC 38:2, EtC 38:3) from particles and sediments were between -165‰ and -221‰ and increased linearly ( R2 = 0.7-0.9) with water δD values from the head to the mouth of the Bay. Individual alkenones were depleted in deuterium by 156-188‰ relative to water. The MeC 37 alkenones were consistently enriched by ˜12‰ relative to the EtC 38 alkenones, and the di-unsaturated alkenones of both varieties were consistently enriched by ˜20‰ relative to the tri-unsaturated alkenones. All of the increase in alkenone δD values could be accounted for by the water δD increase. Consequently, no net change in alkenone-water D/ H fractionation occurred as a result of the salinity increase from 10 to 29. This observation is at odds with results from culture studies with alkenone-producing marine coccolithophorids, and from two field studies, one with a dinoflagellate sterol in the CB, and one with a wide variety of lipids in saline ponds on Christmas Island, that indicate a decline in D/ H fractionation with increasing salinity. Why D/ H fractionation in alkenones in the CB showed no dependence on salinity, while D/ H fractionation in CB dinsoterol decreased by 1‰ per unit increase in salinity remains to be determined. Two hypotheses we consider to be valid are that (i) the assemblage of alkenone-producing haptophytes changes along the Bay and each species has a different sensitivity to salinity, such that no apparent trend in αalkenone-water occurs along the salinity gradient, and (ii) greater osmoregulation capacity in coastal haptophytes may result in a diminished sensitivity of alkenone-water D/ H fractionation to salinity changes.

  14. Recent estuarine deposits, Chesapeake Bay and Apalachicola Bay

    SciTech Connect

    Donoghue, J.F.

    1985-02-01

    Estuarine facies are not easily discernible in the ancient record, because they represent a transition stage between fluvial and marine deposits. Modern estuarine sediments, nevertheless, are widespread because of the ongoing marine transgression. This widespread occurrence indicates that, during a highstand, estuaries are important centers for deposition of sediments shed from the continents. Sedimentologic studies have been made of 2 major estuaries: Chesapeake Bay (the largest US estuary) and Apalachicola Bay (estuary of the largest river in Florida). A detailed sediment budget for the Chesapeake, using radiotracers, clay mineralogy, magnetic stratigraphy, and other methods, demonstrates that the estuary is filling rapidly with sediment. Its remaining sedimentologic lifetime can be measured in centuries. Most of this filling has come at the expense of shoreline erosion. The rate of sedimentation, as measured by C-14, Pb-210, and Cs-137, has accelerated sharply over the past 2 centuries, from a few millimeters per year to present rates of a few centimeters per year. Sediment trapping effectiveness of the Chesapeake is nearly 100%. For Apalachicola Bay, the filling rate has been slower, although it appears to be nearly as efficient in retaining sediment. It has undergone a comparable change in sedimentation rates and sources over the past few centuries, as shown by magnetic stratigraphy and clay mineralogy. Given favorable conditions, such estuaries might be expected to contribute relatively thin but areally extensive bodies of fine-grained sediment to the rock record.

  15. Latitudinal and longitudinal variation in aerosol characteristics from Sun photometer and MODIS over the Bay of Bengal and Arabian Sea during ICARB

    NASA Astrophysics Data System (ADS)

    Kedia, Sumita; Ramachandran, S.

    2008-07-01

    Spatial variations in aerosol optical properties as function of latitude and longitude are analysed over the Bay of Bengal and Arabian Sea during ICARB cruise period of March-May 2006 from in situ sun photometer and MODIS (Terra, Aqua) satellite measurements. Monthly mean 550 nm aerosol optical depths (AODs) over the Bay of Bengal and Arabian Sea show an increase from March to May both in spatial extent and magnitude. AODs are found to increase with latitude from 4°N to 20°N over the Bay of Bengal while over Arabian Sea, variations are not significant. Sun photometer and MODIS AODs agree well within ±1σ variation. Bay of Bengal AOD (0.28) is higher than the Arabian Sea (0.24) latitudinally. Aerosol fine mode fraction (FMF) is higher than 0.6 over Bay of Bengal, while FMF in the Arabian Sea is about 0.5. Bay of Bengal α(˜1) is higher than the Arabian Sea value of 0.7, suggesting the dominance of fine mode aerosols over Bay of Bengal which is corroborated by higher FMF values over Bay of Bengal. Air back trajectory analyses suggest that aerosols from different source regions contribute differently to the optical characteristics over the Bay of Bengal and Arabian Sea.

  16. Empirical Bayes Analysis of Quantitative Proteomics Experiments

    PubMed Central

    Margolin, Adam A.; Ong, Shao-En; Schenone, Monica; Gould, Robert; Schreiber, Stuart L.; Carr, Steven A.; Golub, Todd R.

    2009-01-01

    Background Advances in mass spectrometry-based proteomics have enabled the incorporation of proteomic data into systems approaches to biology. However, development of analytical methods has lagged behind. Here we describe an empirical Bayes framework for quantitative proteomics data analysis. The method provides a statistical description of each experiment, including the number of proteins that differ in abundance between 2 samples, the experiment's statistical power to detect them, and the false-positive probability of each protein. Methodology/Principal Findings We analyzed 2 types of mass spectrometric experiments. First, we showed that the method identified the protein targets of small-molecules in affinity purification experiments with high precision. Second, we re-analyzed a mass spectrometric data set designed to identify proteins regulated by microRNAs. Our results were supported by sequence analysis of the 3′ UTR regions of predicted target genes, and we found that the previously reported conclusion that a large fraction of the proteome is regulated by microRNAs was not supported by our statistical analysis of the data. Conclusions/Significance Our results highlight the importance of rigorous statistical analysis of proteomic data, and the method described here provides a statistical framework to robustly and reliably interpret such data. PMID:19829701

  17. Levi-Civita cylinders with fractional angular deficit

    NASA Astrophysics Data System (ADS)

    Krisch, J. P.; Glass, E. N.

    2011-05-01

    The angular deficit factor in the Levi-Civita vacuum metric has been parametrized using a Riemann-Liouville fractional integral. This introduces a new parameter into the general relativistic cylinder description, the fractional index α. When the fractional index is continued into the negative α region, new behavior is found in the Gott-Hiscock cylinder and in an Israel shell.

  18. Nelson River and Hudson Bay

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Rivers that empty into large bodies of water can have a significant impact on the thawing of nearshore winter ice. This true-color Moderate Resolution Imaging Spectroradiometer (MODIS) image from May 18, 2001, shows the Nelson River emptying spring runoff from the Manitoba province to the south into the southwestern corner of Canada's Hudson Bay. The warmer waters from more southern latitudes hasten melting of ice near the shore, though some still remained, perhaps because in shallow coastal waters, the ice could have been anchored to the bottom. High volumes of sediment in the runoff turned the inflow brown, and the rim of the retreating ice has taken on a dirty appearance even far to the east of the river's entrance into the Bay. The sediment would have further hastened the melting of the ice because its darker color would have absorbed more solar radiation than cleaner, whiter ice. Image courtesy Jacques Descloitres, MODIS Land Rapid Response Team at NASA GSFC

  19. The Chesapeake Bay impact structure

    USGS Publications Warehouse

    Powars, David S.; Edwards, Lucy E.; Gohn, Gregory S.; Horton, Jr., J. Wright

    2015-10-28

    About 35 million years ago, during late Eocene time, a 2-mile-wide asteroid or comet smashed into Earth in what is now the lower Chesapeake Bay in Virginia. The oceanic impact vaporized, melted, fractured, and (or) displaced the target rocks and sediments and sent billions of tons of water, sediments, and rocks into the air. Glassy particles of solidified melt rock rained down as far away as Texas and the Caribbean. Models suggest that even up to 50 miles away the velocity of the intensely hot air blast was greater than 1,500 miles per hour, and ground shaking was equivalent to an earthquake greater than magnitude 8.0 on the Richter scale. Large tsunamis affected most of the North Atlantic basin. The Chesapeake Bay impact structure is among the 20 largest known impact structures on Earth.

  20. Virioplankton distribution and activity in a tropical eutrophicated bay

    NASA Astrophysics Data System (ADS)

    Bettarel, Yvan; Arfi, Robert; Bouvier, Thierry; Bouvy, Marc; Briand, Enora; Colombet, Jonathan; Corbin, Daniel; Sime-Ngando, Télesphore

    2008-11-01

    The study of lysogeny in aquatic systems is an often overlooked aspect of microbial ecology, especially in tropical environments. Herein, the fraction of lysogenized cells (FLC) was detected in the surface waters of 20 coastal stations distributed from the eutrophicated shoreline to seaward waters of Hann Bay (Senegal). Concurrently, viral lytic infection rates were extrapolated from the frequency of visibly infected bacterial cells (FVIC), as determined from transmission electron microscopy observations. The experimental induction of prophage was observed in less than 3% of indigenous marine bacteria, suggesting that lysogenic stages of infection are rare in Hann Bay. Similarly, only 0.5-4.7% of bacteria showed visible signs of lytic infection. However, the positive correlation between the fraction of lysogenic and lytic cells ( r = 0.67, p < 0.05, n = 20) may actually indicate that the coexistence of both lifestyles may be due to the massive and rapid induction of lysogens, potentially from the high levels of local UV radiation. Overall, we suggest that the determination of FVIC and FLC to examine the predominance of one type of cycle versus the other may be a source of misinterpretation in some particular aquatic environments.

  1. soil organic matter fractionation

    NASA Astrophysics Data System (ADS)

    Osat, Maryam; Heidari, Ahmad

    2010-05-01

    Carbon is essential for plant growth, due to its effects on other soil properties like aggregation. Knowledge of dynamics of organic matter in different locations in the soil matrix can provide valuable information which affects carbon sequestration and soil the other soil properties. Extraction of soil organic matter (SOM) fractions has been a long standing approach to elucidating the roles of soil organic matter in soil processes. Several kind fractionation methods are used and all provide information on soil organic matter function. Physical fractionation capture the effects on SOM dynamics of the spatial arrangement of primary and secondary organomineral particles in soil while chemical fractionation can not consider the spatial arrangement but their organic fractions are suitable for advanced chemical characterization. Three method of physical separation of soil have been used, sieving, sedimentation and densitometry. The distribution of organic matter within physical fractions of the soil can be assessed by sieving. Sieving separates soil particles based strictly on size. The study area is located on north central Iran, between 35° 41'- 36° 01' N and 50° 42'- 51° 14' E. Mean annual precipitation about 243.8 mm and mean annual air temperature is about 14.95 °C. The soil moisture and temperature regime vary between aridic-thermic in lower altitudes to xeric-mesic in upper altitudes. More than 36 surface soil samples (0-20 cm) were collected according to land-use map units. After preliminary analyzing of samples 10 samples were selected for further analyses in five size fractions and three different time intervals in September, January and April 2008. Fractionation carried out by dry sieving in five classes, 1-2 mm, 0.5-1 mm, 270 μm-0.5mm, 53-270 μm and <53 μm. Organic matter and C/N ratio were determined for all fractions at different time intervals. Chemical fractionation of organic matter also carried out according to Tan (2003), also Mineralogical

  2. Fractional Noether Theorem Based on Extended Exponentially Fractional Integral

    NASA Astrophysics Data System (ADS)

    Long, Zi-Xuan; Zhang, Yi

    2013-10-01

    Based on the new type of fractional integral definition, namely extended exponentially fractional integral introduced by EI-Nabulsi, we study the fractional Noether symmetries and conserved quantities for both holonomic system and nonholonomic system. First, the fractional variational problem under the sense of extended exponentially fractional integral is established, the fractional d'Alembert-Lagrange principle is deduced, then the fractional Euler-Lagrange equations of holonomic system and the fractional Routh equations of nonholonomic system are given; secondly, the invariance of fractional Hamilton action under infinitesimal transformations of group is also discussed, the corresponding definitions and criteria of fractional Noether symmetric transformations and quasi-symmetric transformations are established; finally, the fractional Noether theorems for both holonomic system and nonholonomic system are explored. What's more, the relationship between the fractional Noether symmetry and conserved quantity are revealed.

  3. The influence of climate, nutrient loading and predation on spatial and temporal changes in fish assemblages in Narragansett Bay

    EPA Science Inventory

    Estuarine fish are a highly valued resources that are affected by several factors, including climate, trophic interactions, pollution, and fishing pressure. Here, we examine the spatial and temporal patterns in estuarine fish assemblage in Narragansett Bay, an estuary located in...

  4. Terra Nova Bay Polynya, Antarctica

    NASA Technical Reports Server (NTRS)

    2007-01-01

    In Terra Nova Bay, off the Scott Coast of Victoria Land, Antarctica, a large pocket of open water persists throughout most of the Southern Hemisphere winter, even while most of the rest of the Antarctic coastline is firmly embraced by the frozen Southern Ocean. This pocket of open water--a polynya--results from exceptionally strong winds that blow downslope from the Trans-Antarctic Mountains. These fierce katabatic winds drive the sea ice eastward. Since the dominant ice drift pattern in the area is northward, the Drygalski Ice Tongue prevents the bay from being re-populated with sea ice. This image of the Terra Nova Bay polynya was captured by the Moderate Resolution Imaging Spectroradiometer (MODIS) on NASA's Aqua satellite on October 16, 2007. Sea ice sits over the Ross Sea like a cracked and crumbling windshield. Blue-tinged glaciers flow down from the Trans-Antarctic Mountains. Although glaciers can appear blue because of melt water, they can also get that tint when the wind scours and polishes the ice surface. Given the strength of the katabatic winds along this part of the Antarctic coast, it is likely that the blue color of these glaciers is a result of their having been swept clean of snow. The large image has a spatial resolution (level of detail) of 250 meters per pixel.

  5. Lithospheric Architecture Beneath Hudson Bay

    NASA Astrophysics Data System (ADS)

    Porritt, R. W.; Miller, M. S.; Darbyshire, F. A.

    2015-12-01

    Hudson Bay overlies some of the thickest Precambrian lithosphere on Earth, whose internal structures contain important clues to the earliest workings of plate formation. The terminal collision, the Trans-Hudson Orogen, brought together the Western Churchill craton to the northwest and the Superior craton to the southeast. These two Archean cratons along with the Paleo-Proterozoic Trans-Hudson internides, form the core of the North American craton. We use S to P converted wave imaging and absolute shear velocity information from a joint inversion of P to S receiver functions, new ambient noise derived phase velocities, and teleseismic phase velocities to investigate this region and determine both the thickness of the lithosphere and the presence of internal discontinuities. The lithosphere under central Hudson Bay approaches 􏰂350 km thick but is thinner (􏰂200-250 km) around the periphery of the Bay. Furthermore, the amplitude of the lithosphere-asthenosphere boundary (LAB) conversion from the S receiver functions is unusually large for a craton, suggesting a large thermal contrast across the LAB, which we interpret as direct evidence of the thermal insulation effect of continents on the asthenosphere. Within the lithosphere, midlithospheric discontinuities, significantly shallower than the base of the lithosphere, are often imaged, suggesting the mechanisms that form these layers are common. Lacking time-history information, we infer that these discontinuities reflect reactivation of formation structures during deformation of the craton.

  6. Lithospheric architecture beneath Hudson Bay

    NASA Astrophysics Data System (ADS)

    Porritt, Robert W.; Miller, Meghan S.; Darbyshire, Fiona A.

    2015-07-01

    Hudson Bay overlies some of the thickest Precambrian lithosphere on Earth, whose internal structures contain important clues to the earliest workings of plate formation. The terminal collision, the Trans-Hudson Orogen, brought together the Western Churchill craton to the northwest and the Superior craton to the southeast. These two Archean cratons along with the Paleo-Proterozoic Trans-Hudson internides, form the core of the North American craton. We use S to P converted wave imaging and absolute shear velocity information from a joint inversion of P to S receiver functions, new ambient noise derived phase velocities, and teleseismic phase velocities to investigate this region and determine both the thickness of the lithosphere and the presence of internal discontinuities. The lithosphere under central Hudson Bay approaches ˜350 km thick but is thinner (˜200-250 km) around the periphery of the Bay. Furthermore, the amplitude of the LAB conversion from the S receiver functions is unusually large for a craton, suggesting a large thermal contrast across the LAB, which we interpret as direct evidence of the thermal insulation effect of continents on the asthenosphere. Within the lithosphere, midlithospheric discontinuities, significantly shallower than the base of the lithosphere, are often imaged, suggesting the mechanisms that form these layers are common. Lacking time-history information, we infer that these discontinuities reflect reactivation of formation structures during deformation of the craton.

  7. Electrochemically controlled iron isotope fractionation

    NASA Astrophysics Data System (ADS)

    Black, Jay R.; Young, Edward D.; Kavner, Abby

    2010-02-01

    Variations in the stable isotope abundances of transition metals have been observed in the geologic record and trying to understand and reconstruct the physical/environmental conditions that produced these signatures is an area of active research. It is clear that changes in oxidation state lead to large fractionations of the stable isotopes of many transition metals such as iron, suggesting that transition metal stable isotope signatures could be used as a paleo-redox proxy. However, the factors contributing to these observed stable isotope variations are poorly understood. Here we investigate how the kinetics of iron redox electrochemistry generates isotope fractionation. Through a combination of electrodeposition experiments and modeling of electrochemical processes including mass-transport, we show that electron transfer reactions are the cause of a large isotope separation, while mass transport-limited supply of reactant to the electrode attenuates the observed isotopic fractionation. Furthermore, the stable isotope composition of electroplated transition metals can be tuned in the laboratory by controlling parameters such as solution chemistry, reaction overpotential, and solution convection. These methods are potentially useful for generating isotopically-marked metal surfaces for tracking and forensic purposes. In addition, our studies will help interpret stable isotope data in terms of identifying underlying electron transfer processes in laboratory and natural samples.

  8. Interactions between finfish aquaculture and lobster catches in a sheltered bay.

    PubMed

    Loucks, Ronald H; Smith, Ruth E; Fisher, E Brian

    2014-11-15

    Interactions between open-net pen finfish aquaculture and lobster catches in a sheltered bay in Nova Scotia, Canada, were investigated using fishermen's participatory research in annual lobster trap surveys over seven years. Fishermen recorded lobster catches during the last two weeks of May from 2007 to 2013. Catches for each trap haul were recorded separately for ovigerous and market-sized lobsters. Catch trends within the bay were compared to regional trends. Results of correlation analyses indicated that ovigerous catch trends were strongly affected by the fish farm's feeding/fallow periods. There was no significant correlation between trends for bay and LFA lobster landings. Patterns of lobster catch per unit effort extending over considerable distance in Port Mouton Bay appear to be influenced by proximity to the fish farm regardless of year-to-year variation in water temperatures and weather conditions. Odours and habitat changes surrounding open-net pen finfish operations are potential factors affecting lobster displacement.

  9. Chesapeake bay submerged aquatic vegetation habitat requirements and restoration targets: A technical synthesis

    SciTech Connect

    Batiuk, R.A.; Orth, R.J.; Moore, K.A.; Dennison, W.C.; Stevenson, J.C.

    1992-12-01

    Chesapeake Bay, one of the world's largest estuaries, has experienced deterioration of water quality from nutrient enrichment, resulting in anoxic or hypoxic conditions and declines in living resources. Determination of relationships between water quality and various living resources provides a mechanism of relating anthropogenic inputs to the 'health' of Chesapeake Bay. One of the major factors contributing to the high productivity of Chesapeake Bay has been the historical abundance of submerged aquatic vegetation (SAV). SAV in Chesapeake Bay include some twenty freshwater and marine species of rooted, flowering plants. SAV provide food for waterfowl and are critical habitat for shellfish and finfish. SAV also affect nutrient cycling, sediment stability, and water turbidity. The primary objective of the SAV Technical Synthesis is to establish the quantitative levels of relevant water quality parameters necessary to support continued survival, propagation, and restoration of SAV.

  10. Interactions between finfish aquaculture and lobster catches in a sheltered bay.

    PubMed

    Loucks, Ronald H; Smith, Ruth E; Fisher, E Brian

    2014-11-15

    Interactions between open-net pen finfish aquaculture and lobster catches in a sheltered bay in Nova Scotia, Canada, were investigated using fishermen's participatory research in annual lobster trap surveys over seven years. Fishermen recorded lobster catches during the last two weeks of May from 2007 to 2013. Catches for each trap haul were recorded separately for ovigerous and market-sized lobsters. Catch trends within the bay were compared to regional trends. Results of correlation analyses indicated that ovigerous catch trends were strongly affected by the fish farm's feeding/fallow periods. There was no significant correlation between trends for bay and LFA lobster landings. Patterns of lobster catch per unit effort extending over considerable distance in Port Mouton Bay appear to be influenced by proximity to the fish farm regardless of year-to-year variation in water temperatures and weather conditions. Odours and habitat changes surrounding open-net pen finfish operations are potential factors affecting lobster displacement. PMID:25242235

  11. Simple simulation of the annual variation of the specific photosynthesis rate in Jiaozhou Bay

    NASA Astrophysics Data System (ADS)

    Ren, Ling; Zhang, Man-Ping; Lu, Xian-Kun; Feng, Shi-Zuo; Brockmann, Uwe H.

    2001-03-01

    A simple diagnostic simulation of the annual cycling of the surface specific photosynthesis rate (SPR) in Jiaozhou Bay is described in this paper. Light intensity, temperature and nutrients (nitrate+ammonia, phosphate) were considered as main factors controlling photosynthesis of phytoplankton and were introduced into the model by different function equations. The simulated variation of specific photosynthesis rate coincided with the measured data. Analysis of the effect of every factor on photosynthesis indicated that the variation of photosynthesis rate was controlled by all these three factors, while temperature showed good correlation with SPR as measurement showed. This diagnostic simulation yielded the values of some parameter relating with the photosynthesis in Jiaozhou Bay.

  12. 78 FR 46813 - Safety Zone; Evening on the Bay Fireworks; Sturgeon Bay, WI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-02

    ... Department of Homeland Security FR Federal Register NPRM Notice of Proposed Rulemaking TFR Temporary Final... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Evening on the Bay Fireworks; Sturgeon Bay... of Sturgeon Bay due to a fireworks display. This temporary safety zone is necessary to protect...

  13. 76 FR 38020 - Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-29

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Bay Point Fireworks, Bay Point Marina.... This Zone is intended to restrict vessels from portions of Lake Erie for the Bay Point Fireworks. This... fireworks displays. DATES: This regulation is effective from 10 p.m. on July 2, 2011 through 10:20 p.m....

  14. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...: The Corps of Engineers also has regulations dealing with these areas in 33 CFR Part 207. ... Ship Canal, Wisc. 162.125 Section 162.125 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel...

  15. 33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false San Pedro Bay-Anaheim Bay, CA. 80.1114 Section 80.1114 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay,...

  16. 33 CFR 80.1114 - San Pedro Bay-Anaheim Bay, CA.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false San Pedro Bay-Anaheim Bay, CA. 80.1114 Section 80.1114 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1114 San Pedro Bay—Anaheim Bay,...

  17. General perspective view of Old Young's Bay Bridge, view looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    General perspective view of Old Young's Bay Bridge, view looking northwest - Old Young's Bay Bridge, Spanning Young's Bay at Milepoint 6.89 on Warrenton-Astoria Highway (Highway No. 9), Astoria, Clatsop County, OR

  18. General perspective view of Old Young's Bay Bridge, view looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    General perspective view of Old Young's Bay Bridge, view looking east - Old Young's Bay Bridge, Spanning Young's Bay at Milepoint 6.89 on Warrenton-Astoria Highway (Highway No. 9), Astoria, Clatsop County, OR

  19. Substructure view of the Young's Bay Bridge, view looking east, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Substructure view of the Young's Bay Bridge, view looking east, north side of the bascule trusswork - Old Young's Bay Bridge, Spanning Young's Bay at Milepoint 6.89 on Warrenton-Astoria Highway (Highway No. 9), Astoria, Clatsop County, OR

  20. 328. Caltrans, Photographer March 19, 1936 "WEST BAY". VIEW OF ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    328. Caltrans, Photographer March 19, 1936 "WEST BAY". VIEW OF DECK TRUSS, SUSPENSION BRIDGE, AND SAN FRANCISCO ANCHORAGE UNDER CONSTRUCTION. 6-2075 - San Francisco Oakland Bay Bridge, Spanning San Francisco Bay, San Francisco, San Francisco County, CA

  1. General perspective view of Old Young's Bay Bridge, view looking ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    General perspective view of Old Young's Bay Bridge, view looking southeast, north side of structure - Old Young's Bay Bridge, Spanning Young's Bay at Milepoint 6.89 on Warrenton-Astoria Highway (Highway No. 9), Astoria, Clatsop County, OR

  2. Real World: NASA and the Chesapeake Bay

    NASA Video Gallery

    Learn how NASA uses Earth observing satellites to monitor conditions in the Chesapeake Bay over time. Information about pollution, eutrophication, land cover and watershed runoff helps water manage...

  3. Role of remote sensing in Bay measurements

    NASA Technical Reports Server (NTRS)

    Mugler, J. P., Jr.; Godfrey, J. P.; Hickman, G. D.; Hovis, W. G.; Pearson, A. O.; Weaver, K. N.

    1978-01-01

    Remote measurements of a number of surface or near surface parameters for baseline definition and specialized studies, remote measurements of episodic events, and remote measurements of the Bay lithosphere are considered in terms of characterizing and understanding the ecology of the Chesapeake Bay. Geologic processes and features best suited for information enhancement by remote sensing methods are identified. These include: (1) rates of sedimentation in the Bay; (2) rates of erosion of Bay shorelines; (3) spatial distribution and geometry of aquifers; (4) mapping of Karst terrain (sinkholes); and (5) mapping of fracture patterns. Recommendations for studying problem areas identified are given.

  4. 75 FR 11837 - Chesapeake Bay Watershed Initiative

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-12

    ... restore, enhance, and conserve soil, air, and related resources in the Chesapeake Bay watershed through the implementation of conservation practices. These conservation practices reduce soil erosion...

  5. Polychlorinated biphenyls (PCBs) in San Francisco Bay.

    PubMed

    Davis, J A; Hetzel, F; Oram, J J; McKee, L J

    2007-09-01

    San Francisco Bay is facing a legacy of polychlorinated biphenyls (PCBs) spread widely across the land surface of the watershed, mixed deep into the sediment of the Bay, and contaminating the Bay food web to a degree that poses health risks to humans and wildlife. In response to this persistent problem, water quality managers are establishing a PCB total maximum daily load (TMDL) and implementation plan to accelerate the recovery of the Bay from decades of PCB contamination. This article provides a review of progress made over the past 15 years in managing PCBs and understanding their sources, pathways, fate, and effects in the Bay, and highlights remaining information needs that should be addressed in the next 10 years. The phaseout of PCBs during the 1970s and the 1979 federal ban on sale and production led to gradual declines from the 1970s to the present. However, 25 years after the ban, PCB concentrations in some Bay sport fish today are still more than ten times higher than the threshold of concern for human health. Without further management action it appears that the general recovery of the Bay from PCB contamination will take many more decades. PCB concentrations in sport fish were, along with mercury, a primary cause of a consumption advisory for the Bay and the consequent classification of the Bay as an impaired water body. Several sources of information indicate that PCB concentrations in the Bay may also be high enough to adversely affect wildlife, including rare and endangered species. The greater than 90% reduction in food web contamination needed to meet the targets for protection of human health would likely also generally eliminate risks to wildlife. PCB contamination in the Bay is primarily associated with industrial areas along the shoreline and in local watersheds. Strong spatial gradients in PCB concentrations persist decades after the release of these chemicals to Bay Area waterways. Through the TMDL process, attention is being more sharply

  6. Detecting the spatial and temporal variability of chlorophylla concentration and total suspended solids in Apalachicola Bay, Florida using MODIS imagery

    USGS Publications Warehouse

    Wang, Hongfang; Hladik, C.M.; Huang, W.; Milla, K.; Edmiston, L.; Harwell, M.A.; Schalles, J.F.

    2010-01-01

    Apalachicola Bay, Florida, accounts for 90% of Florida's and 10% of the nation's eastern oyster (Crassostrea virginica) harvesting. Chlorophyll-a concentration and total suspended solids (TSS) are two important water quality variables, among other environmental factors such as salinity, for eastern oyster production in Apalachicola Bay. In this research, we developed regression models of the relationships between the reflectance of the Moderate-Resolution Imaging Spectroradiometer (MODIS) Terra 250 m data and the two water quality variables based on the Bay-wide field data collected during 14-17 October 2002, a relatively dry period, and 3-5 April 2006, a relatively wet period, respectively. Then we selected the best regression models (highest coefficient of determination, R2) to derive Bay-wide maps of chlorophylla concentration and TSS for the two periods. The MODIS-derived maps revealed large spatial and temporal variations in chlorophylla concentration and TSS across the entire Apalachicola Bay. ?? 2010 Taylor & Francis.

  7. FRACTIONAL CRYSTALLIZATION FEED ENVELOPE

    SciTech Connect

    HERTING DL

    2008-03-19

    Laboratory work was completed on a set of evaporation tests designed to establish a feed envelope for the fractional crystallization process. The feed envelope defines chemical concentration limits within which the process can be operated successfully. All 38 runs in the half-factorial design matrix were completed successfully, based on the qualitative definition of success. There is no feed composition likely to be derived from saltcake dissolution that would cause the fractional crystallization process to not meet acceptable performance requirements. However, some compositions clearly would provide more successful operation than other compositions.

  8. Release Fraction Evaluation

    SciTech Connect

    Bamberger, Judith A.; Glissmeyer, John A.

    2004-01-01

    This document presents results of experiments conducted to measure release fractions during certain tank retrieval processes. The tests were performed in a 1/4 scale model of a waste storage tank. The retrieval processes simulated were: (1) Discharging liquid or slurry from the mouth of a vertically oriented two-in. Schedule 40 pipe. The discharging material was in free-fall from the mouth of the pipe near the top of the tank into a liquid or slurry pool at the bottom of the tank. (2) The jet from a 9/16-in.-diameter nozzle transferring liquid or slurry waste from one side of the tank to the other. The discharging liquid was aimed at the opposite side of the tank from the nozzle and either impacted the tank wall or fell into a liquid or slurry pool in the bottom of the tank. (3) A high pressure fan jet of liquid striking a steel plate or simulated waste from a stand-off distance of a few inches. For each process, a water-soluble fluorescent dye was added to the liquid fraction as a tracer. Kaolin clay was used to represent the solids. The tank was covered and there was no forced ventilation in the tank during the tests. Six air samples were collected during each test. The air samples were collected at fixed positions in the tank. The air sample filters were dried and weighed to determine the solids collection. The fluorescent dye was then leached from each filter and quantified with a fluorometer to determine the collection of liquid. Samples of the slurry and liquid simulants were also collected to determine the quantities of simulant used in each test. To calculate the release fraction, the quantity collected on each air sample was adjusted for the fraction of the tank volume sampled and divided by the quantity of material exposed in the simulation. The method was not as sensitive for the solids content as it was for the liquid content, but in those instances where a solids release fraction was determined, it was in relatively good agreement with that of the

  9. Modeling spatial and temporal variation of suitable nursery habitats for Atlantic sturgeon in the Chesapeake Bay

    NASA Astrophysics Data System (ADS)

    Niklitschek, Edwin J.; Secor, David H.

    2005-07-01

    For rare and endangered species, bioenergetics modeling can represent a valuable approach for understanding issues of habitat value and connectivity among potential habitats within nurseries in restoration programs. We used multivariable bioenergetics and survival models for Atlantic sturgeon to generate spatially explicit maps of potential production in the Chesapeake Bay. For the period 1993-2002, spatial and temporal patterns in water quality effects (temperature, dissolved oxygen [DO] and salinity) on potential production were evaluated. In addition, two forecasted scenarios were modeled: one implementing newly revised U.S. Environmental Protection Agency (EPA) DO-criteria for the Chesapeake Bay, and the other assuming a bay-wide increase of 1 °C due to an underlying trend in regional climate. Atlantic sturgeon's low (survival/growth) tolerance to temperatures >28 °C was a critical constraint during their first 1-2 summers of life. Hatched in freshwater (spring to mid-summer), young-of-the-year were predicted to occupy cooler (deeper) areas as temperature approached sub-lethal levels. While most thermal refuges were located down-estuary, a large fraction of potential refuges were unsuitable due to persistent hypoxia and/or salinity levels beyond the limited osmoregulatory capabilities of early juvenile Atlantic sturgeon. As a result, suitable summer habitats for juvenile Atlantic sturgeons in the Chesapeake Bay were predicted to be spatially restricted and variable between years, ranging from 0 to 35% of the modeled bay surface area. In critical (drought) years, almost no summer habitat was predicted to be available for juvenile Atlantic sturgeon. Value and size of nursery habitat was highly sensitive to climatic oscillations and anthropogenic interventions affecting freshwater inflow, water temperature and/or DO. Achieving EPA DO-criteria for the Chesapeake Bay was predicted to increase total suitable habitat by 13% for an average year, while increasing

  10. Assessing benthic community condition in Chesapeake Bay: does the use of different benthic indices matter?

    PubMed

    Llansó, Roberto J; Vølstad, Jon H; Dauer, Daniel M; Dew, Jodi R

    2009-03-01

    Federal and state environmental agencies conduct several programs to characterize the environmental condition of Chesapeake Bay. These programs use different benthic indices and survey designs, and have produced assessments that differ in the estimate of the extent of benthic community degradation in Chesapeake Bay. Provided that the survey designs are unbiased, differences may exist in the ability of these indices to identify environmental degradation. In this study we compared the results of three indices calculated on the same data, and the assessments of two programs: the Chesapeake Bay Program and the Mid-Atlantic Integrated Assessment (MAIA). We examined the level of agreement of index results using site-based measures of agreement, evaluated sampling designs and statistical estimation methods, and tested for significant differences in assessments. Comparison of ratings of individual sites was done within separate categories of water and sediment quality to identify which indices summarize best pollution problems in Chesapeake Bay. The use of different benthic indices by these programs produced assessments that differed significantly in the estimate of degradation. A larger fraction of poor sites was classified as good by the Environmental Monitoring and Assessment Program's Virginian Province and MAIA benthic indices compared to the Chesapeake Bay benthic index of biotic integrity, although overall classification efficiencies were similar for all indices. Differences in survey design also contributed to differences in assessments. The relative difference between the indices remained the same when they were applied to an independent dataset, suggesting that the indices can be calibrated to produce consistent results.

  11. Sources of mercury to San Francisco Bay surface sediment as revealed by mercury stable isotopes

    USGS Publications Warehouse

    Gehrke, Gretchen E.; Blum, Joel D.; Marvin-DePasquale, Mark

    2011-01-01

    Mercury (Hg) concentrations and isotopic compositions were examined in shallow-water surface sediment (0–2 cm) from San Francisco (SF) Bay to determine the extent to which historic Hg mining contributes to current Hg contamination in SF Bay, and to assess the use of Hg isotopes to trace sources of contamination in estuaries. Inter-tidal and wetland sediment had total Hg (HgT) concentrations ranging from 161 to 1529 ng/g with no simple gradients of spatial variation. In contrast, inter-tidal and wetland sediment displayed a geographic gradient of δ202Hg values, ranging from -0.30% in the southern-most part of SF Bay (draining the New Almaden Hg District) to -0.99% in the northern-most part of SF Bay near the Sacramento–San Joaquin River Delta. Similar to SF Bay inter-tidal sediment, surface sediment from the Alviso Slough channel draining into South SF Bay had a δ202Hg value of -0.29%, while surface sediment from the Cosumnes River and Sacramento–San Joaquin River Delta draining into north SF Bay had lower average δ202Hg values of -0.90% and -0.75%, respectively. This isotopic trend suggests that Hg-contaminated sediment from the New Almaden Hg District mixes with Hg-contaminated sediment from a low δ202Hg source north of SF Bay. Tailings and thermally decomposed ore (calcine) from the New Idria Hg mine in the California Coast Range had average δ202Hg values of -0.37 and +0.03%, respectively, showing that Hg calcination fractionates Hg isotopes resulting in Hg contamination from Hg(II) mine waste products with higher δ202Hg values than metallic Hg(0) produced from Hg mines. Thus, there is evidence for at least two distinct isotopic signals for Hg contamination in SF Bay: Hg associated with calcine waste materials at Hg mines in the Coast Range, such as New Almaden and New Idria; and Hg(0) produced from these mines and used in placer gold mines and/or in other industrial processes in the Sierra Nevada region and SF Bay area.

  12. 1. Aerial view, looking northeast up Newark Bay, showing entire ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. Aerial view, looking northeast up Newark Bay, showing entire island Charles Wisniewski, photographer, January 1985 - Shooters Island, Ships Graveyard, Newark Bay, Staten Island (subdivision), Richmond County, NY

  13. 75 FR 29891 - Special Local Regulation; Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-28

    ... Swim, Great South Bay, NY, in the Federal Register (74 FR 32428). We did not receive any comments or... published at 74 FR 32428 on July 8, 2009, is adopted as a final rule with the following changes: PART 100... Coast Guard is establishing a permanent special local regulation on Great South Bay, NY between...

  14. Consistent assessment of trace metal contamination in surface sediments and suspended particulate matter: a case study from the Jade Bay in NW Germany.

    PubMed

    Beck, Melanie; Böning, Philipp; Schückel, Ulrike; Stiehl, Thorsten; Schnetger, Bernhard; Rullkötter, Jürgen; Brumsack, Hans-Jürgen

    2013-05-15

    Recently, within the framework of European directives, the importance of marine monitoring programs has increased. In this study, a dense sampling grid was applied for a detailed assessment of the metal contents of surface sediments and suspended particulate matter from the Jade Bay, one of the tidal basins in the southern North Sea. The local lithogenic background was defined and compared with average shale, a common reference material. Based on the calculated non-lithogenic fraction and a cluster analysis, the metals are distributed in two groups: (i) elements of mainly natural origin (Co, Cr, and a major portion of Cd) and (ii) elements associated with anthropogenic activity (As, Cd, Cu, Ni, Pb, Sn, and Zn). However, even the metals of the second group are enriched by at most a factor of two relative to the local background, suggesting minimal anthropogenic impact. Spatial distribution maps show that the harbor area of Wilhelmshaven may be a particularly important source of metal.

  15. Momentum fractionation on superstrata

    DOE PAGES

    Bena, Iosif; Martinec, Emil; Turton, David; Warner, Nicholas P.

    2016-05-11

    Superstrata are bound states in string theory that carry D1, D5, and momentum charges, and whose supergravity descriptions are parameterized by arbitrary functions of (at least) two variables. In the D1-D5 CFT, typical three-charge states reside in highdegree twisted sectors, and their momentum charge is carried by modes that individually have fractional momentum. Understanding this momentum fractionation holographically is crucial for understanding typical black-hole microstates in this system. We use solution-generating techniques to add momentum to a multi-wound supertube and thereby construct the first examples of asymptotically-flat superstrata. The resulting supergravity solutions are horizonless and smooth up to well-understood orbifoldmore » singularities. Upon taking the AdS3 decoupling limit, our solutions are dual to CFT states with momentum fractionation. We give a precise proposal for these dual CFT states. Lastly, our construction establishes the very nontrivial fact that large classes of CFT states with momentum fractionation can be realized in the bulk as smooth horizonless supergravity solutions.« less

  16. Understanding Fraction Multiplication.

    ERIC Educational Resources Information Center

    Bezuk, Nadine S.; Armstrong, Barbara E.

    1992-01-01

    Presents five activities to help students construct meaning for multiplying fractions through real-world problem contexts, physical or pictorial models, the recognition of patterns, and the use of calculators. In the context of a garden plot, worksheets examine various aspects of parts of plots, patterns in plots, and a maximization problem.…

  17. Fractions through Fruit Salad.

    ERIC Educational Resources Information Center

    Lincoln, Lisa

    1987-01-01

    The mathematics concept of fractions was taught to a group of learning disabled, dyslexic, and multiply handicapped students (15-20 years old) by preparing a fruit salad. Enthusiastic student participation and enhanced knowledge illustrated the effectiveness of employing several sensory modes in learning activities. (CB)

  18. Field-Flow Fractionation.

    ERIC Educational Resources Information Center

    Caldwell, Karin D.

    1988-01-01

    Describes a technique for separating samples that range over 15 orders of magnitude in molecular weight. Discusses theory, apparatus, and sample preparation techniques. Lists several types of field-flow fractionation (FFF) and their uses: sedimentation FFF, thermal FFF, flow FFF, electrical FFF, and steric FFF. (ML)

  19. Avoidance of Fractions.

    ERIC Educational Resources Information Center

    Hart, Kathleen; Kerslake, Daphne

    The Concepts in Secondary Mathematics and Science (CSMS) and Strategies and Errors in Secondary Mathematics (SESM) research projects based at Chelsa College, England, have shown the marked reluctance of secondary school students to use fractions when solving mathematical problems, even though they have been taught the topic for a number of years.…

  20. Sweet Work with Fractions

    ERIC Educational Resources Information Center

    Vinogradova, Natalya; Blaine, Larry

    2013-01-01

    Almost everyone loves chocolate. However, the same cannot be said about fractions, which are loved by markedly fewer. Middle school students tend to view them with wary respect, but little affection. The authors attempt to sweeten the subject by describing a type of game involving division of chocolate bars. The activity they describe provides a…

  1. Videodisc Instruction in Fractions.

    ERIC Educational Resources Information Center

    Carnine, Douglas; And Others

    1987-01-01

    How laser videodisc technology can be used to improve mathematics instruction is described, with note of the development of a videodisc curriculum on mastering fractions. Relevant research is reviewed, as well as how teachers can use the technology. The instructional design is described, and field-testing and revision reported. (MNS)

  2. Momentum fractionation on superstrata

    NASA Astrophysics Data System (ADS)

    Bena, Iosif; Martinec, Emil; Turton, David; Warner, Nicholas P.

    2016-05-01

    Superstrata are bound states in string theory that carry D1, D5, and momentum charges, and whose supergravity descriptions are parameterized by arbitrary functions of (at least) two variables. In the D1-D5 CFT, typical three-charge states reside in high-degree twisted sectors, and their momentum charge is carried by modes that individually have fractional momentum. Understanding this momentum fractionation holographically is crucial for understanding typical black-hole microstates in this system. We use solution-generating techniques to add momentum to a multi-wound supertube and thereby construct the first examples of asymptotically-flat superstrata. The resulting supergravity solutions are horizonless and smooth up to well-understood orbifold singularities. Upon taking the AdS3 decoupling limit, our solutions are dual to CFT states with momentum fractionation. We give a precise proposal for these dual CFT states. Our construction establishes the very nontrivial fact that large classes of CFT states with momentum fractionation can be realized in the bulk as smooth horizonless supergravity solutions.

  3. Differential Association of the Na+/H+ Exchanger Regulatory Factor (NHERF) Family of Adaptor Proteins with the Raft-and the Non-Raft Brush Border Membrane Fractions of NHE3

    PubMed Central

    Sultan, Ayesha; Luo, Min; Yu, Qin; Riederer, Brigitte; Xia, Weiliang; Chen, Mingmin; Lissner, Simone; Gessner, Johannes E.; Donowitz, Mark; Yun, C. Chris; deJonge, Hugo; Lamprecht, Georg; Seidler, Ursula

    2014-01-01

    Background/Aims Trafficking, brush border membrane (BBM) retention, and signal-specific regulation of the Na+/H+ exchanger NHE3 is regulated by the Na+/H+ Exchanger Regulatory Factor (NHERF) family of PDZ-adaptor proteins, which enable the formation of multiprotein complexes. It is unclear, however, what determines signal specificity of these NHERFs. Thus, we studied the association of NHE3, NHERF1 (EBP50), NHERF2 (E3KARP), and NHERF3 (PDZK1) with lipid rafts in murine small intestinal BBM. Methods Detergent resistant membranes (“lipid rafts”) were isolated by floatation of Triton X-incubated small intestinal BBM from a variety of knockout mouse strains in an Optiprep step gradient. Acid-activated NHE3 activity was measured fluorometrically in BCECF-loaded microdissected villi, or by assessment of CO2/HCO3− mediated increase in fluid absorption in perfused jejunal loops of anethetized mice. Results NHE3 was found to partially associate with lipid rafts in the native BBM, and NHE3 raft association had an impact on NHE3 transport activity and regulation in vivo. NHERF1, 2 and 3 were differentially distributed to rafts and non-rafts, with NHERF2 being most raft-associated and NHERF3 entirely non-raft associated. NHERF2 expression enhanced the localization of NHE3 to membrane rafts. The use of acid sphingomyelinase-deficient mice, which have altered membrane lipid as well as lipid raft composition, allowed us to test the validity of the lipid raft concept in vivo. Conclusions The differential association of the NHERFs with the raft-associated and the non-raft fraction of NHE3 in the brush border membrane is one component of the differential and signal-specific NHE3 regulation by the different NHERFs. PMID:24297041

  4. Impact of continental outflow on chemistry of atmospheric aerosols over tropical Bay of Bengal

    NASA Astrophysics Data System (ADS)

    Srinivas, B.; Kumar, A.; Sarin, M. M.; Sudheer, A. K.

    2011-07-01

    The continental outflow from Indo-Gangetic Plain and south-east Asia dominates the widespread dispersal of pollutants over tropical Bay of Bengal (BoB) during the late NE-monsoon (January-March). It is thus pertinent to assess the impact on marine atmospheric boundary layer of BoB. The chemical data, based on analyses of size-segregated (PM2.5 and PM10) aerosols, suggest the dominance of nss-SO42- (range: 1.3 to 28 μg m-3) in PM2.5. Almost all SO42- is of anthropogenic origin and accounts for as much as 65 % of the water-soluble inorganic constituents. The impact of anthropogenic sources is further evident from the widespread depletion of chloride (range: 40 to 100 %) compared to sea-salt composition. The carbonaceous species (EC and OC) contribute nearly 25 % to PM2.5; and significant linear relationship with K+ suggests biomass burning as their dominant source (biofuels and agricultural waste). The enhancement in the fractional solubility of aerosol Fe, as assessed in PM2.5, re-emphasizes the impact of combustion sources (biomass and fossil-fuel) and chemical processing (of dust) during the long-range transport. The high enrichment factors of heavy metals (Pb and Cd) further demonstrate the influence of pollution sources on the chemistry of MABL. The downwind transport of pollutants and exchange across air-sea interface can, thus, have profound impact on the ocean surface biogeochemistry.

  5. 76 FR 2085 - National Estuarine Research Reserve System; North Inlet-Winyah Bay, SC and San Francisco Bay, CA...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-12

    ... support of the Bay's growing population: Climate change, species interactions, water quality, and habitat...- Winyah Bay such as impacts from coastal and watershed development, climate events on coastal...

  6. Development of a Hydrodynamic and Transport model of Bellingham Bay in Support of Nearshore Habitat Restoration

    SciTech Connect

    Wang, Taiping; Yang, Zhaoqing; Khangaonkar, Tarang

    2010-04-22

    root mean square error values for surface elevation, velocity, temperature, and salinity time series are 0.11 m, 0.10 m/s, 1.28oC, and 1.91 ppt, respectively. The model was able to reproduce the salinity and temperature stratifications inside Bellingham Bay. Wetting and drying processes in tidal flats in Bellingham Bay, Samish Bay, and Padilla Bay were also successfully simulated. Both model results and observed data indicated that water surface elevations inside Bellingham Bay are highly correlated to tides. Circulation inside the bay is weak and complex and is affected by various forcing mechanisms, including tides, winds, freshwater inflows, and other local forcing factors. The Bellingham Bay model solution was successfully linked to the NOAA oil spill trajectory simulation model “General NOAA Operational Modeling Environment (GNOME).” Overall, the Bellingham Bay model has been calibrated reasonably well and can be used to provide detailed hydrodynamic information in the bay and adjacent water bodies. While there is room for further improvement with more available data, the calibrated hydrodynamic model provides useful hydrodynamic information in Bellingham Bay and can be used to support sediment transport and water quality modeling as well as assist in the design of nearshore restoration scenarios.

  7. Numerical simulation of alga growth and control in Dalian Bay.

    PubMed

    Li, Ying; Huang, Caisheng; Zhou, Jiti

    2013-12-01

    WAHMO model was used to simulate the distribution of pollutants in Dalian Bay, China as to predict well as the growth and control of alga. The observed and predicted values of main pollutants showed a good trend at all study locations and the different between them can be ignored. Simulation results illustrated that phosphate was one of limited factors to control algal growth at the location near the sewage outfall, meanwhile, away from the sewage outfall, the synergy of ammonium nitrogen and phosphate was the limited factor. PMID:25078837

  8. Fractionalized Majorana modes in ultracold bosonic systems

    NASA Astrophysics Data System (ADS)

    Maghrebi, Mohammad F.; Ganeshan, Sriram; Clarke, David; Gorshkov, Alexey; Sau, Jay Deep

    2015-03-01

    Fractionalized Majorana fermions, also known as parafermions, are exotic topologically protected modes that go beyond the simplest non-Abelian anyons, Majorana fermions. They commute up to a nontrivial phase factor in contrast to the minus sign for fermions. These modes are proposed to emerge in devices fabricated from a fractional quantum Hall system and a superconductor. With recent advances towards the realization of fractional quantum Hall states of bosonic ultracold atoms, we propose a realization of parafermions in a system consisting of two Bose-Einstein-condensate trenches within a bosonic fractional quantum Hall state. We show that parafermionic zero modes emerge at the endpoints of the trench and give rise to a topologically protected degeneracy. We also discuss methods for preparing and detecting these modes. University of Maryland for start-up support, and NSF PFC at the JQI.

  9. MISR Views Delaware Bay, Chesapeake Bay, and the Appalachian Mountains

    NASA Technical Reports Server (NTRS)

    2000-01-01

    Multi-angle Imaging SpectroRadiometer (MISR) images of Delaware Bay, Chesapeake Bay, and the Appalachian Mountains acquired on March 24, 2000 during Terra orbit 1417. The large image on the right was taken by the MISR camera viewing straight down (nadir). The series of smaller images, from top to bottom, respectively, were taken by cameras viewing 70.5 degrees forward, 45.6 degrees forward, 45.6 degrees aftward, and 70.5 degrees aftward of nadir. These images cover the environs of Newark, Philadelphia, Baltimore, Washington, and Richmond. Differences in brightness, color, and contrast as a function of view angle are visible over both land and water. Scientists are using MISR data to monitor changes in clouds, Earth's surface, and pollution particles in the air, and to assess their impact on climate. North is toward the top.

    MISR was built and is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Earth Science, Washington, DC. The Terra satellite is managed by NASA's Goddard Space Flight Center, Greenbelt, MD. JPL is a division of the California Institute of Technology.

    For more information: http://www-misr.jpl.nasa.gov

  10. JUVENILE BAY SCALLOP (ARGOPECTEN IRRADIANS) HABITAT PREFERENCES

    EPA Science Inventory

    Habitat quality and quantity are known to be important for maintaining populations of bay scallops (Argopecten irradians), but data linking habitat attributes to bay scallop populations are lacking. This information is essential to understand the role of habitat alteration in th...

  11. Turning the tide: Saving the Chesapeake Bay

    SciTech Connect

    Horton, T.; Eichbaum, W.

    1991-07-01

    The Chesapeake Bay is one of the most productive and important ecosystems on earth, and as such is a model for other estuaries facing the demands of commerce, tourism, transportation, recreation, and other uses. This book presents a comprehensive look at two decades of efforts to save the bay, outlining which methods have worked and which have not.

  12. 33 CFR 117.735 - Newark Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Newark Bay. 117.735 Section 117.735 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements New Jersey § 117.735 Newark Bay. The following...

  13. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  14. 33 CFR 117.597 - Dorchester Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Dorchester Bay. 117.597 Section 117.597 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.597 Dorchester Bay. The draw...

  15. 33 CFR 117.597 - Dorchester Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Dorchester Bay. 117.597 Section 117.597 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.597 Dorchester Bay. The draw...

  16. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  17. 33 CFR 117.853 - Sandusky Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Sandusky Bay. 117.853 Section 117.853 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Ohio § 117.853 Sandusky Bay. The draw of the Norfolk...

  18. 33 CFR 117.597 - Dorchester Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Dorchester Bay. 117.597 Section 117.597 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.597 Dorchester Bay. The draw...

  19. 33 CFR 117.853 - Sandusky Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Sandusky Bay. 117.853 Section 117.853 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Ohio § 117.853 Sandusky Bay. The draw of the Norfolk...

  20. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  1. 33 CFR 117.853 - Sandusky Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sandusky Bay. 117.853 Section 117.853 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Ohio § 117.853 Sandusky Bay. The draw of the Norfolk...

  2. Chesapeake Bay Program: Point-Source Atlas

    SciTech Connect

    Macknis, J.

    1988-08-01

    The atlas contains pollutant loadings from Chesapeake Bay watershed municipal and industrial point sources drawn from the Chesapeake Bay Program computerized data base. Nutrient and toxic discharges are included. Effluent data are averaged for the calendar year 1985. Detailed information is presented in 23 tables and 14 figures.

  3. Sonar Probing in Narragansett Bay.

    PubMed

    Edgerton, H E; Payson, H; Yules, J; Dillon, W

    1964-12-11

    A 12-kilocycle pulsed transducer, with a 0.1 millisecond duration, is used for tracing a sub-bottom rock profile in Narragansett Bay. The short sonar pulse of high energy is produced by a capacitor discharge. Over-the-side installation of the transducer permits the use of any boat or ship for the survey work. Coherent presentation of the data on a wet paper recorder gives an instantaneous visual record. A cross a north-south rock formation, a recurring rise and fall of the rock is shown throughout the sedimentary deposit.

  4. Sources and sinks of [sup 210]Pb in Concepcion Bay, Chile

    SciTech Connect

    Salamanca, Orrego, M.A.

    1993-01-01

    The sources and sinks of [sup 210]Pb to Concepcion Bay waters were evaluated to discern the relative importance of the main removal and supply mechanisms of this radionuclide to the waters of Concepcion Bay. The main inputs of [sup 210]Pb are the atmospheric supply and the advection of offshore upwelling waters. The atmospheric input was measured in precipitation using a collector and inventories of excess [sup 210]Pb in Rocuant and Raqui marsh sediments. The average atmospheric supply of [sup 210]Pb for Concepcion area is about 0.3 dpm cm[sup [minus]2] yr[sup [minus]1]. The advective input from upwelling varies from 0.6 [+-] 1.3 to 2.1 [+-] 2.0 dpm cm[sup [minus]2] yr[sup [minus]1]. [sup 210]Pb is removed efficiently from the water column as shelf water with high [sup 210]Pb content crosses the continental shelf off Concepcion Bay, with [sup 210]Pb/[sup 226]Ra activity ratios decreasing by a factor of 3 to 4 before reaching the interior of the bay. This is coincident with an increase of suspended matter concentration towards inside the bay. The main removal of [sup 210]Pb from Concepcion Bay waters is deposition in sediments. There is an increase of the [sup 210]Pb inventories toward the bay entrance excess (by a factor of 2) and outside the bay sediments (by a factor of 7). This pattern can be explained by an increase of mixing of sediments by the benthic infauna and enhanced removal of [sup 210]Pb from the water column by particles near the bay mouth. Mass balance calculations are included. The residence time of [sup 210]Pb with respect to removal from water column is estimated to be 17 to 43 days. The results of this research indicate that [sup 210]Pb and probably other similar particle-reactive contaminants (such as heavy metals) are retained and redistributed inside the bay by circulation, resuspension and biological mixing.

  5. An Introduction to Continued Fractions.

    ERIC Educational Resources Information Center

    Moore, Charles G.

    Provided is an introduction to the properties of continued fractions for the intellectually curious high school student. Among the topics included are (1) Expansion of Rational Numbers into Simple Continued Fractions, (2) Convergents, (3) Continued Fractions and Linear Diophantine Equations of the Type am + bn = c, (4) Continued Fractions and…

  6. Radioisotopic data of sediment collected in Mobile and Bon Secour Bays, Alabama

    USGS Publications Warehouse

    Marot, Marci E.; Smith, Christopher G.

    2012-01-01

    The focus of this study was to determine the extent of natural and (or) anthropogenic impacts on the sedimentary records of Mobile and Bon Secour Bays, Alabama during the last 150 years. These bays are unique in that anthropogenic activities are generally widespread and span both the eastern and western shorelines. However, there is a clear distinction in the types of human development and infrastructure between the western and eastern shorelines. These activities and the differences in land-use and -change influence the overall supply and remobilization of sediment to and within the bay. These factors could subsequently threaten the health and integrity of these environments and their ability to mitigate against long-term processes associated with climate change. In an attempt to characterize long-term accretion rates within the Mobile Bay Estuarine System (MBES), seven box cores were collected and analyzed for excess lead-210 (210Pbxs, the difference between total and supported 210Pb) and cesium-137 (137Cs) activities. The MBES receives sediment and water from the Alabama and Tombigbee River watersheds, which converge into the Mobile-Tensaw River (MTR) system just prior to discharging into Mobile Bay. Riverine discharge from the MTR system to the bay is second only to the Mississippi River discharge to the Gulf of Mexico for the conterminous United States.

  7. Study on the calculation models of bus delay at bays using queueing theory and Markov chain.

    PubMed

    Sun, Feng; Sun, Li; Sun, Shao-Wei; Wang, Dian-Hai

    2015-01-01

    Traffic congestion at bus bays has decreased the service efficiency of public transit seriously in China, so it is crucial to systematically study its theory and methods. However, the existing studies lack theoretical model on computing efficiency. Therefore, the calculation models of bus delay at bays are studied. Firstly, the process that buses are delayed at bays is analyzed, and it was found that the delay can be divided into entering delay and exiting delay. Secondly, the queueing models of bus bays are formed, and the equilibrium distribution functions are proposed by applying the embedded Markov chain to the traditional model of queuing theory in the steady state; then the calculation models of entering delay are derived at bays. Thirdly, the exiting delay is studied by using the queueing theory and the gap acceptance theory. Finally, the proposed models are validated using field-measured data, and then the influencing factors are discussed. With these models the delay is easily assessed knowing the characteristics of the dwell time distribution and traffic volume at the curb lane in different locations and different periods. It can provide basis for the efficiency evaluation of bus bays.

  8. Effects of waves on coastal water dispersion in a small estuarine bay

    NASA Astrophysics Data System (ADS)

    Delpey, M. T.; Ardhuin, F.; Otheguy, P.; Jouon, A.

    2014-01-01

    A three-dimensional wave-current model is used to investigate wave-induced circulations in a small estuarine bay and its impact on freshwater exchanges with the inner shelf, related to stratified river plume dispersion. Modeled salinity fields exhibit a lower salinity surface layer due to river outflows, with typical depth of 1 m inside the bay. The asymmetric wave forcing on the bay circulation, related to the local bathymetry, significantly impacts the river plumes. It is found that the transport initiated in the surf zone by the longshore current can oppose and thus reduce the primary outflow of freshwater through the bay inlets. Using the model to examine a high river runoff event occurring during a high-energy wave episode, waves are found to induce a 24 h delay in freshwater evacuation. At the end of the runoff event, waves have reduced the freshwater flux to the ocean by a factor 5, and the total freshwater volume inside the bay is increased by 40%. According to the model, and for this event, the effect of the surf zone current on the bay flushing is larger than that of the wind. The freshwater balance is sensitive to incident wave conditions. Maximum freshwater retention is found for intermediate offshore wave heights 1 m < Hs < 2 m. For higher-energy waves, the increase in the longshore current reduces the retention, which is two times lower for Hs = 4 m than for Hs = 2 m.

  9. Spatial and temporal trends of contaminants in eggs of wading birds from San Francisco Bay, California

    USGS Publications Warehouse

    Hothem, R.L.; Roster, D.L.; King, K.A.; Keldsen, T.J.; Marois, K.C.; Wainwright, S.E.

    1995-01-01

    Between 1989 and 1991, reproduction by black-crowned night-herons (Nycticorax nycticorax) and snowy egrets (Egretta thula) was studied at sites in San Francisco Bay. Eggs were collected from these and other bay sites and from South Wilbur Flood Area, a reference site in California's San Joaquin Valley. Eggs were analyzed for inorganic trace elements, organochlorine pesticides, and polychlorinated biphenyls (PCBs). Results were compared among sites and years and with results of previous studies. There was some evidence of impaired reproduction, but concentrations of contaminants were generally lower than threshold levels for such effects. Egg hatchability was generally good, with predation being the factor that most limited reproductive success. Mean PCB concentrations were generally higher in eggs from the south end of San Francisco Bay than from the north, but the only temporal change, an increase, was observed at Alcatraz Island. There were spatial differences for p,p'-DDE in night-heron eggs in 1990, but the highest mean concentration of DDE was in night-heron eggs from South Wilbur in 1991. Temporal declines in maximum concentrations of DDE in eggs were observed in the bay, but means did not change significantly over time, At Bair Island in the southern end of the bay, mean concentrations of mercury decreased while selenium increased in night-heron eggs over time, but there were no clear bay-wide spatial or temporal trends for either element.

  10. Spatial and temporal trends of contaminants in eggs of wading birds from San Francisco Bay, California

    SciTech Connect

    Hothem, R.L.; Marois, K.C.; Wainwright, S.E.; Roster, D.L.; King, K.A.; Keldsen, T.J.

    1995-08-01

    Between 1989 and 1991, reproduction by black-crowned night-herons (Nycticorax nycticorax) and snowy egrets (Egretta thula) was studied at sites in San Francisco Bay. Eggs were collected from these and other bay sites and from South Wilbur Flood Area, a reference site in California`s San Joaquin Valley. Eggs were analyzed for inorganic trace elements, organochlorine pesticides, and polychlorinated biphenyls (PCBs). Results were compared among sites and years and with results of previous studies. There was some evidence of impaired reproduction, but concentrations of contaminants were generally lower than threshold levels for such effects. Egg hatchability was generally good, with predation being the factor that most limited reproductive success. Mean PCB concentrations were generally higher in eggs from the south end of San Francisco Bay than from the north, but the only temporal change, an increase, was observed at Alcatraz Island. There were spatial differences for p,p{prime}-DDE in night-heron eggs in 1990, but the highest mean concentration of DDE was in night-heron eggs from South Wilbur in 1991. Temporal declines in maximum concentrations of DDE in eggs were observed in the bay, but means did not change significantly over time. At Bair Island in the southern end of the bay, mean concentrations of mercury decreased while selenium increased in night-heron eggs over time, but there were no clear bay-wide spatial or temporal trends for either element.

  11. Study on the calculation models of bus delay at bays using queueing theory and Markov chain.

    PubMed

    Sun, Feng; Sun, Li; Sun, Shao-Wei; Wang, Dian-Hai

    2015-01-01

    Traffic congestion at bus bays has decreased the service efficiency of public transit seriously in China, so it is crucial to systematically study its theory and methods. However, the existing studies lack theoretical model on computing efficiency. Therefore, the calculation models of bus delay at bays are studied. Firstly, the process that buses are delayed at bays is analyzed, and it was found that the delay can be divided into entering delay and exiting delay. Secondly, the queueing models of bus bays are formed, and the equilibrium distribution functions are proposed by applying the embedded Markov chain to the traditional model of queuing theory in the steady state; then the calculation models of entering delay are derived at bays. Thirdly, the exiting delay is studied by using the queueing theory and the gap acceptance theory. Finally, the proposed models are validated using field-measured data, and then the influencing factors are discussed. With these models the delay is easily assessed knowing the characteristics of the dwell time distribution and traffic volume at the curb lane in different locations and different periods. It can provide basis for the efficiency evaluation of bus bays. PMID:25759720

  12. Nitrate export from forested watersheds in the Chesapeake Bay Region, USA

    SciTech Connect

    Bricker, O.P.; Kuebler, A.; Rice, K.C.; Anderson, R.T.; Kennedy, M.M.

    1994-12-31

    Current levels of nitrogen inputs to the Chesapeake Bay exceed the ecological demand, resulting in eutrophication and algal blooms which degrade water quality. The Chesapeake Bay receives nitrogen compounds from a variety of sources. Previously, much attention had been focused on point source contributions such as sewage treatment plants and industrial discharges. More recently, however, inputs from atmospheric deposition and non-point sources have been considered. Land use practices vary widely within the Chesapeake Bay watershed, however, the largest portion is forested. Given that forested watersheds occupy a large area of the Chesapeake Bay drainage system, export of nitrogen from forested watersheds could potentially play an important role in the nitrogen balance. Here, examine the nitrate input/output budgets for eight forested headwater watersheds in the Chesapeake Bay drainage, several of which have a 10-year record of chemical data. The authors explore annual and seasonal input/output budgets for these watersheds and, at several sites, define the variability in nitrate export during episodic events Seasonal and episodic information on nitrate export may be useful to watershed managers in designing and applying techniques for minimizing nitrate export from these systems. Comparison of the behavior of nitrate in these systems, and with forested watersheds in other regions across a deposition gradient, will help to elucidate the factors that control nitrate export from forested watersheds. This information will better define the expected nitrate exports from forested watersheds and contribute to improving the confidence limits of models of nutrient loading to the Chesapeake Bay.

  13. [Reflectance of sea ice in Liaodong Bay].

    PubMed

    Xu, Zhan-tang; Yang, Yue-zhong; Wang, Gui-fen; Cao, Wen-xi; Kong, Xiang-peng

    2010-07-01

    In the present study, the relationships between sea ice albedo and the bidirectional reflectance distribution in Liaodong Bay were investigated. The results indicate that: (1) sea ice albedo alpha(lambda) is closely related to the components of sea ice, the higher the particulate concentration in sea ice surface is, the lower the sea ice albedo alpha(lambda) is. On the contrary, the higher the bubble concentration in sea ice is, the higher sea ice albedo alpha(lambda) is. (2) Sea ice albedo alpha(lambda) is similar to the bidirectional reflectance factor R(f) when the probe locates at nadir. The R(f) would increase with the increase in detector zenith theta, and the correlation between R(f) and the detector azimuth would gradually increase. When the theta is located at solar zenith 63 degrees, the R(f) would reach the maximum, and the strongest correlation is also shown between the R(f) and the detector azimuth. (3) Different types of sea ice would have the different anisotropic reflectance factors.

  14. S saturation history of Nain Plutonic Suite mafic intrusions: origin of the Voisey's Bay Ni-Cu-Co sulfide deposit, Labrador, Canada

    NASA Astrophysics Data System (ADS)

    Lightfoot, Peter C.; Keays, Reid R.; Evans-Lamswood, Dawn; Wheeler, Robert

    2012-01-01

    The Voisey's Bay deposit is hosted in a 1.34-Ga intrusion composed of troctolite, olivine gabbro, and ferrogabbro. The sulfide mineralization is associated with magmatic breccias that are enveloped by weakly mineralized olivine gabbros and troctolites, and also occurs as veins along structures in adjacent paragneiss. A dyke is connected to the base of the north wall of the Eastern Deeps Intrusion, and the entry point of this dyke into the chamber is the locus of the Eastern Deeps nickel sulfide deposit. A detailed exploration in the area between the Eastern Deeps and the Ovoid has shown that these intrusions and ore deposits are connected by a splayed dyke. The Eastern Deeps Deposit is surrounded by a halo of moderately to weakly mineralized variable-textured troctolite (VTT) that reaches a maximum thickness above the axis of the Eastern Deeps Deposit along the northern wall of the Eastern Deeps Intrusion. The massive sulfides and breccia sulfides are petrologically and chemically different when compared to the disseminated sulfides in the VTT, and there is a marked break in Ni tenor of sulfide between the two. Sulfides hosted in the dyke tend to have low metal tenors ([Ni]100 = 2.5-3.5%), sulfides in Eastern Deeps massive and breccia ores have intermediate Ni tenors ([Ni]100 = 3.5-4%), and disseminated sulfides in overlying rocks have high Ni tenors ([Ni]100 = 4-8%). Four principal processes control the compositions of the Voisey's Bay sulfides. Coarse-grained loop-textured ores consisting of pyrrhotite crystals separated by chalcopyrite and pentlandite exhibit a two orders of magnitude variation in the Pd/Ir ratio which is due to mineralogical variations where pentlandite is enriched in Pd and Ir is dispersed throughout the mineral assemblage. A decrease in Ir and Rh from the margin of the Ovoid toward cubanite-rich parts at the central part of the Ovoid is consistent with fractionation of the sulfide from the margins toward the center of the Ovoid. The Ovoid

  15. Late Quaternary history of southern Chesapeake Bay

    SciTech Connect

    Colman, S.M.; Hobbs, C.H. III; Halka, J.P.

    1985-01-01

    More than 700 km of high-resolution, seismic-reflection profiles and sidescan-sonar images provide new information about the late Quaternary history of southern Chesapeake Bay. Sidescan-sonar images show that, excluding the nearshore zone, most of the bay bottom has a monotonously smooth surface, except that sand waves, ripples, and other bedforms occur in local areas affected by tidal currents. Seismic-reflection data show that the Quaternary stratigraphy of the southern part of the Bay is related primarily to the last cycle of sea-level change. The Quaternary section overlies an erosion surface cut deeply into gently seaward-dipping marine beds of Neogene age. Fluvial paleochannels, related to the last major low sea-level stand, are characterized by as much as 55 m of incision and by thin, irregular, terrace and channel-bottom deposits. Marine and estuarine deposits related to the Holocene transgression partially or fully bury the fluvial valleys and overlie the interfluves. A prominent feature of the Bay-mouth area is a wedge of sediment that has prograded into the Bay from the inner shelf. The common assumption--that the Chesapeake Bay is the drowned valley of the Pleistocene Susquehanna River--is only partially valid for the southern part of the Bay. The Bay mouth area, in general, is relatively young. The axial channel of the Bay is a modern tidal channel that is actively eroding Tertiary deposits and migrating toward the south and west; it is unrelated to older fluvial channels. Also, the positions of the modern axial channel and the last two fluvial paleochannels indicate long-term southward migration of the Bay mouth.

  16. Benthic trophic network in the Bay of Banyuls-sur-Mer (northwest Mediterranean, France): An assessment based on stable carbon and nitrogen isotopes analysis

    NASA Astrophysics Data System (ADS)

    Carlier, Antoine; Riera, Pascal; Amouroux, Jean-Michel; Bodiou, Jean-Yves; Grémare, Antoine

    2007-03-01

    The benthic trophic network in the Bay of Banyuls-sur-Mer was studied through the carbon and nitrogen isotopic characterization of a large set of soft-bottom macrobenthic invertebrates, fishes and potential food sources. Continental inputs as well as seagrass meadows did not contribute significantly to this benthic trophic network as indicated by: (1) the difference between their δ 13C signatures (respectively -28.4‰ and -9.5‰) and those of sampled animals (between -21.0‰ and -14.6‰); and (2) their low inputs to the bay. Benthic primary consumers fed mostly on surface sediment organic matter (SSOM), which tightly interacts with suspended particulate organic matter (SPOM) and sedimenting organic matter (STOM) due to sediment resuspension. Our results also suggest the occurrence of a transfer between marine SPOM and some invertebrates (e.g. Veretillum cynomorium) and fishes (e.g. Boops boops and Spicara melanurus) through zooplankton. Moreover, the different types of primary consumers (i.e., suspension-feeders, interface-feeders, surface deposit-feeders and subsurface deposit-feeders) preferentially used distinct fractions of the heterogeneous SPOM-STOM-SSOM pool. These differences were mostly related with feeding depth and resulted in distinct isotopic signatures. Differences in the stable isotopic ratios of suspension and interface-feeders could also partly reflect the use of microphytobenthos by the later. Assuming a 15N-enrichment factor of 3.4‰ between the lower and upper ranges of two successive trophic levels, we estimated that the benthic food web of the Bay of Banyuls-sur-Mer was composed of 4 trophic levels. The comparison with our δ 13C values suggests that the whole trophic food chain is affected by continental inputs at the immediate vicinity of the Rhône River mouth even though these effects are maximal for deposit-feeding and carnivorous polychaetes.

  17. Testing fractional action cosmology

    NASA Astrophysics Data System (ADS)

    Shchigolev, V. K.

    2016-08-01

    The present work deals with a combined test of the so-called Fractional Action Cosmology (FAC) on the example of a specific model obtained by the author earlier. In this model, the effective cosmological term is proportional to the Hubble parameter squared through the so-called kinematic induction. The reason of studying this cosmological model could be explained by its ability to describe two periods of accelerated expansion, that is in agreement with the recent observations and the cosmological inflation paradigm. First of all, we put our model through the theoretical tests, which gives a general conception of the influence of the model parameters on its behavior. Then, we obtain some restrictions on the principal parameters of the model, including the fractional index, by means of the observational data. Finally, the cosmography parameters and the observational data compared to the theoretical predictions are presented both analytically and graphically.

  18. [Fractionated P-bilirubins].

    PubMed

    Schou, C S; Mortensen, H

    1989-08-14

    A diazo-based dry film technique for the estimation of different bilirubins in plasma is now available. This procedure separates bilirubins from icteric sera into three separate fractions: bilirubin (unconjugated), bilirubin-glucuronides (mono + diglucuronide) and bilirubin-albumin. In newborns with prolonged jaundice classification of hyperbilirubinemia is of importance for choice of treatment. While binding of bilirubin and bilirubin-glucuronides to albumin is non covalent, reversible, bilirubin-albumin appears to be firmly associated with albumin by covalent bonds. This causes delayed clearance of this bilirubin fraction from plasma as the half-life of albumin is approximately 18 days. Hence the substance concentration of bilirubin-albumin will decrease at a slower rate than will bilirubin and bilirubin-glucuronide, despite hepatobiliary recovery. Bilirubin-albumin may therefore prove of value in the differentiation between different clinical entities with hyperbilirubinemia. PMID:2773134

  19. New Dry Fractionation Methods

    NASA Technical Reports Server (NTRS)

    McKay, David S.; Cooper, Bonnie L.

    2010-01-01

    This slide presentation describes new fractionation methods that are used to create dust that is respirable for testing the effects of inhalation of lunar dust in preparation for future manned lunar exploration. Because lunar dust is a very limited commodity, a method that does not result in loss of the material had to be developed. The dust separation system that is described incorporates some traditional methods, while preventing the dust from being contaminated or changed in reactivity properties while also limiting losses.

  20. Fractional Galilean symmetries

    NASA Astrophysics Data System (ADS)

    Hosseiny, Ali; Rouhani, Shahin

    2016-09-01

    We generalize the differential representation of the operators of the Galilean algebras to include fractional derivatives. As a result a whole new class of scale invariant Galilean algebras are obtained. The first member of this class has dynamical index z = 2 similar to the Schrödinger algebra. The second member of the class has dynamical index z = 3 / 2, which happens to be the dynamical index Kardar-Parisi-Zhang equation.

  1. Model Fractional Chern Insulators.

    PubMed

    Behrmann, Jörg; Liu, Zhao; Bergholtz, Emil J

    2016-05-27

    We devise local lattice models whose ground states are model fractional Chern insulators-Abelian and non-Abelian topologically ordered states characterized by exact ground state degeneracies at any finite size and infinite entanglement gaps. Most saliently, we construct exact parent Hamiltonians for two distinct families of bosonic lattice generalizations of the Z_{k} parafermion quantum Hall states: (i) color-entangled fractional Chern insulators at band filling fractions ν=k/(C+1) and (ii) nematic states at ν=k/2, where C is the Chern number of the lowest band. In spite of a fluctuating Berry curvature, our construction is partially frustration free: the ground states reside entirely within the lowest band and exactly minimize a local (k+1) body repulsion term by term. In addition to providing the first known models hosting intriguing states such as higher Chern number generalizations of the Fibonacci anyon quantum Hall states, the remarkable stability and finite-size properties make our models particularly well suited for the study of novel phenomena involving, e.g., twist defects and proximity induced superconductivity, as well as being a guide for designing experiments.

  2. Model Fractional Chern Insulators

    NASA Astrophysics Data System (ADS)

    Behrmann, Jörg; Liu, Zhao; Bergholtz, Emil J.

    2016-05-01

    We devise local lattice models whose ground states are model fractional Chern insulators—Abelian and non-Abelian topologically ordered states characterized by exact ground state degeneracies at any finite size and infinite entanglement gaps. Most saliently, we construct exact parent Hamiltonians for two distinct families of bosonic lattice generalizations of the Zk parafermion quantum Hall states: (i) color-entangled fractional Chern insulators at band filling fractions ν =k /(C +1 ) and (ii) nematic states at ν =k /2 , where C is the Chern number of the lowest band. In spite of a fluctuating Berry curvature, our construction is partially frustration free: the ground states reside entirely within the lowest band and exactly minimize a local (k +1 ) body repulsion term by term. In addition to providing the first known models hosting intriguing states such as higher Chern number generalizations of the Fibonacci anyon quantum Hall states, the remarkable stability and finite-size properties make our models particularly well suited for the study of novel phenomena involving, e.g., twist defects and proximity induced superconductivity, as well as being a guide for designing experiments.

  3. Model Fractional Chern Insulators.

    PubMed

    Behrmann, Jörg; Liu, Zhao; Bergholtz, Emil J

    2016-05-27

    We devise local lattice models whose ground states are model fractional Chern insulators-Abelian and non-Abelian topologically ordered states characterized by exact ground state degeneracies at any finite size and infinite entanglement gaps. Most saliently, we construct exact parent Hamiltonians for two distinct families of bosonic lattice generalizations of the Z_{k} parafermion quantum Hall states: (i) color-entangled fractional Chern insulators at band filling fractions ν=k/(C+1) and (ii) nematic states at ν=k/2, where C is the Chern number of the lowest band. In spite of a fluctuating Berry curvature, our construction is partially frustration free: the ground states reside entirely within the lowest band and exactly minimize a local (k+1) body repulsion term by term. In addition to providing the first known models hosting intriguing states such as higher Chern number generalizations of the Fibonacci anyon quantum Hall states, the remarkable stability and finite-size properties make our models particularly well suited for the study of novel phenomena involving, e.g., twist defects and proximity induced superconductivity, as well as being a guide for designing experiments. PMID:27284668

  4. Oxygen isotope fractionation in divalent metal carbonates

    USGS Publications Warehouse

    O'Neil, J.R.; Clayton, R.N.; Mayeda, T.K.

    1969-01-01

    Equilibrium fractionation factors for the distribution of 18O between alkaline-earth carbonates and water have been measured over the temperature range 0-500??C. The fractionation factors ?? can be represented by the equations CaCO3-H2O, 1000 ln??=2.78(106 T-2)-3.39, SrCO3-H 2O, 1000 ln??=2.69(106 T-2)-3.74, BaCO3-H2O, 1000 ln??=2.57(106 T -2)-4.73. Measurements on MnCO3, CdCO3, and PbCO3 were made at isolated temperatures. A statistical-mechanical calculation of the isotopic partition function ratios gives reasonably good agreement with experiment. Both cationic size and mass are important in isotopic fractionation, the former predominantly in its effect on the internal vibrations of the anion, the latter in its effect on the lattice vibrations.

  5. Water resources planning for rivers draining into Mobile Bay. Part 2: Non-conservative species transport models

    NASA Technical Reports Server (NTRS)

    April, G. C.; Liu, H. A.

    1975-01-01

    Total coliform group bacteria were selected to expand the mathematical modeling capabilities of the hydrodynamic and salinity models to understand their relationship to commercial fishing ventures within bay waters and to gain a clear insight into the effect that rivers draining into the bay have on water quality conditions. Parametric observations revealed that temperature factors and river flow rate have a pronounced effect on the concentration profiles, while wind conditions showed only slight effects. An examination of coliform group loading concentrations at constant river flow rates and temperature shows these loading changes have an appreciable influence on total coliform distribution within Mobile Bay.

  6. Structure, age and origin of the bay-mouth shoal deposits, Chesapeake Bay, Virginia

    USGS Publications Warehouse

    Colman, Steven M.; Berquist, C.R.; Hobbs, C. H.

    1988-01-01

    The mouth of Chesapeake Bay contains a distinctive shoal complex and related deposits that result from the complex interaction of three different processes: (1) progradation of a barrier spit at the southern end of the Delmarva Peninsula, (2) strong, reversing tidal currents that transport and rework sediment brought to the bay mouth from the north, and (3) landward (bayward) net non-tidal circulation and sediment transport. Together, these processes play a major role in changing the configuration of the estuary and filling it with sediment. The deposits at the mouth of the bay hold keys both to the evolution of the bay during the Holocene transgression and to the history of previous generations of the bay. The deposit associated with the shoals at the mouth of the bay, the bay-mouth sand, is a distinct stratigraphic unit composed mostly of uniform, gray, fine sand. The position and internal structure of the unit shows that it is related to near-present sea level, and thus is less than a few thousand years old. The processes affecting the upper surface of the deposit and the patterns of erosion and deposition at this surface are complex, but the geometry and structure of the deposit indicate that it is a coherent unit that is prograding bayward and tending to fill the estuary. The source of the bay-mouth sand is primarily outside the bay in the nearshore zone of the Delmarva Peninsula and on the inner continental shelf. The internal structure of the deposit, its surface morphology, its heavy-mineral composition, bottom-current studies, comparative bathymetry, and sediment budgets all suggest that sand is brought to the bay mouth by southerly longshore drift along the Delmarva Peninsula and then swept into the bay. In addition to building the southward- and bayward-prograding bay-mouth sand, these processes result in sand deposition tens of kilometers into the bay. ?? 1988.

  7. Microbial diversity in restored wetlands of San Francisco Bay

    SciTech Connect

    Theroux, Susanna; Hartman, Wyatt; He, Shaomei; Tringe, Susannah

    2013-12-09

    Wetland ecosystems may serve as either a source or a sink for atmospheric carbon and greenhouse gases. This delicate carbon balance is influenced by the activity of belowground microbial communities that return carbon dioxide and methane to the atmosphere. Wetland restoration efforts in the San Francisco Bay-Delta region may help to reverse land subsidence and possibly increase carbon storage in soils. However, the effects of wetland restoration on microbial communities, which mediate soil metabolic activity and carbon cycling, are poorly studied. In an effort to better understand the underlying factors which shape the balance of carbon flux in wetland soils, we targeted the microbial communities in a suite of restored and historic wetlands in the San Francisco Bay-Delta region. Using DNA and RNA sequencing, coupled with greenhouse gas monitoring, we profiled the diversity and metabolic potential of the wetland soil microbial communities along biogeochemical and wetland age gradients. Our results show relationships among geochemical gradients, availability of electron acceptors, and microbial community composition. Our study provides the first genomic glimpse into microbial populations in natural and restored wetlands of the San Francisco Bay-Delta region and provides a valuable benchmark for future studies.

  8. Features of aerosol optical depths over the Bay of Bengal and the Arabian Sea during premonsoon season: Variabilities and anthropogenic influence

    NASA Astrophysics Data System (ADS)

    Kedia, Sumita; Ramachandran, S.

    2008-06-01

    Spectral aerosol optical depths (AOD) measured on board a cruise over the Bay of Bengal and the Arabian Sea during March-May 2006 are analyzed. Mean 0.5 μm AOD over the Bay of Bengal is higher (0.36) than the Arabian Sea (0.25). AODs obtained from MODIS Terra and Aqua are found to track well the Sun photometer AODs. A comparison between Sun photometer and MODIS AODs yielded a correlation coefficient of 0.96. MODIS fine mode fraction over the Bay of Bengal is higher (0.71) when compared to the Arabian Sea value of 0.60. Ångström exponent (α) over the Bay of Bengal is higher at 1.12, indicating the dominance of smaller size aerosols in the aerosol columnar distribution than the Arabian Sea (0.73), while Ångström coefficient (β) is comparable at 0.15 and 0.16 for the Bay of Bengal and the Arabian Sea. Background AODs are higher over the Bay of Bengal and the Arabian Sea indicating a strong continental influence. The scaling distance is lower over the Bay of Bengal due to nearly similar AODs, while the scaling distance over the Arabian Sea is about 2000 km. The anthropogenic influence in AODs over the Bay of Bengal and the Arabian Sea estimated using wind speed dependent AODs and maritime clean AODs are found to agree within ±1σ of the anthropogenic fraction obtained from MODIS AODs and FMFs. The mean anthropogenic contribution to the AODs estimated from the three methods is higher over the Bay of Bengal (68-75%) than the Arabian Sea (51-65%).

  9. 10. VIEW TO NORTHEAST FROM WITHIN SOUTHWEST BAY, LOOKING THROUGH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    10. VIEW TO NORTHEAST FROM WITHIN SOUTHWEST BAY, LOOKING THROUGH CENTER BAY AND INTO NORTHEAST BAY. NOTE TRAVELING BRIDGE CRANE OVERHEAD AND SWINGING BOOM CRANES ATTACHED TO COLUMNS ON RIGHT AND LEFT. NOTE ALSO THE DIFFERENCE IN TRUSSES SUPPORTING CRANEWAY TRACKS FOR SIDE BAYS AND CENTER BAY. TRUSSES SUPPORTING CRANEWAY TRACKS IN SIDE BAYS (CENTER FOREGROUND AND FAR BACKGROUND) ARE HOWE TRUSSES WITH WOOD DIAGONALS AND STEEL VERTICALS. TRUSSES SUPPORTING CRANEWAY TRACKS IN CENTER BAY (MID BACKGROUND) ARE PRATT TRUSSES WITH WOOD VERTICALS AND DIAGONALS. - Rosie the Riveter National Historical Park, Auxiliary Plate Shop, 912 Harbour Way, Richmond, Contra Costa County, CA

  10. [Ablative and fractional lasers].

    PubMed

    Beylot, C; Grognard, C; Michaud, T

    2009-10-01

    The use of pulsed or scanning Carbon Dioxide, and pulsed Erbium-YAG lasers allows the programmable and reproducible photocoagulation of thin layers of the epidermis and superficial dermis. Thermal damage depends on the type of laser and is greater with CO(2) lasers. The degree of neocollagenesis is proportional to the thermal damage and is better with CO(2) lasers. Their main indication is the correction of photoaged facial skin but they can also be used for corrective dermatology, e.g. for scars and genodermatosis. Results are highly satisfactory but the technique is invasive and the patient experiences a social hindrance of around two weeks. Fractionated techniques treat 25% of the defective skin area at each session in noncontiguous microzones; four sessions are therefore necessary to treat the entire cutaneous surface. The treatment is given under topical anesthesia and is much less invasive, particularly with nonablative fractional laser treatment in which photothermolysis does not penetrate below the epidermis and/or the effects are slight, with no or very little social isolation. However, the results are much less satisfactory than the results of ablative laser and there is no firming effect. Other zones than the face can be treated. With the fractional CO(2) and Erbium ablative lasers, which have multiplied over the past 2 years, the much wider impacts cause perforation of the epidermis and there is a zone of ablation by laser photovaporization, with a zone of thermal damage below. The results are better in correcting photoaging of the face, without, however, achieving the efficacy of ablative lasers, which remain the reference technique. However, the effects are not insignificant, requiring at least 5 days of social isolation.

  11. BOBMEX: The Bay of Bengal Monsoon Experiment.

    NASA Astrophysics Data System (ADS)

    Bhat, G. S.; Gadgil, S.; Hareesh Kumar, P. V.; Kalsi, S. R.; Madhusoodanan, P.; Murty, V. S. N.; Prasada Rao, C. V. K.; Babu, V. Ramesh; Rao, L. V. G.; Rao, R. R.; Ravichandran, M.; Reddy, K. G.; Sanjeeva Rao, P.; Sengupta, D.; Sikka, D. R.; Swain, J.; Vinayachandran, P. N.

    2001-10-01

    The first observational experiment under the Indian Climate Research Programme, called the Bay of Bengal Monsoon Experiment (BOBMEX), was carried out during July-August 1999. BOBMEX was aimed at measurements of important variables of the atmosphere, ocean, and their interface to gain deeper insight into some of the processes that govern the variability of organized convection over the bay. Simultaneous time series observations were carried out in the northern and southern Bay of Bengal from ships and moored buoys. About 80 scientists from 15 different institutions in India collaborated during BOBMEX to make observations in most-hostile conditions of the raging monsoon. In this paper, the objectives and the design of BOBMEX are described and some initial results presented. During the BOBMEX field phase there were several active spells of convection over the bay, separated by weak spells. Observation with high-resolution radiosondes, launched for the first time over the northern bay, showed that the magnitudes of the convective available potential energy (CAPE) and the convective inhibition energy were comparable to those for the atmosphere over the west Pacific warm pool. CAPE decreased by 2-3 kJ kg-1 following convection, and recovered in a time period of 1-2 days. The surface wind speed was generally higher than 8 m s-1. The thermohaline structure as well as its time evolution during the BOBMEX field phase were found to be different in the northern bay than in the southern bay. Over both the regions, the SST decreased during rain events and increased in cloud-free conditions. Over the season as a whole, the upper-layer salinity decreased for the north bay and increased for the south bay. The variation in SST during 1999 was found to be of smaller amplitude than in 1998. Further analysis of the surface fluxes and currents is expected to give insight into the nature of coupling.

  12. Speciation and cycling of mercury in Lavaca Bay, Texas, sediments

    SciTech Connect

    Bloom, N.S.; Gill, G.A.; Cappellino, S.; Dobbs, C.; Mcshea, L.; Driscoll, C.; Mason, R.; Rudd, J.

    1999-01-01

    Sediment depth profiles of total mercury (THg) and monomethylmercury (MMHg) were collected at 15 sites in an anthropogenically contaminated estuarine system (Lavaca Bay, TX). THg in the solid phase increased with depth to a maximum located at 10--30 cm, which corresponds to historic industrial discharges to the bay. MMHg in the solid phase was highest in the upper 0--3 cm of the cores, decreasing rapidly with depth. The MMHg content of the surface sediment was a narrowly constrained fraction of the total over a range of sediment types, while making up only 0.01--0.05% of THg at depth. Porewater concentrations exhibited trends similar to but more exaggerated than in the solid phase. The distribution coefficients (log K{sub d}) for inorganic Hg were similar in most samples, averaging 4.89 {+-} 0.43. The log K{sub d} for MMHg averaged 2.70 {+-} 0.78 over all sites and depths but exhibited a subsurface minimum of 2.29 {+-} 0.67 at the point of maximum dissolved Fe. A time series showed a maximum in both solid phase and porewater MMHg during the early spring, followed by a decrease throughout the remainder of the year.

  13. Stable-isotope analysis of canvasback winter diet in upper Chesapeake Bay

    USGS Publications Warehouse

    Haramis, G.M.; Jorde, D.G.; Macko, S.A.; Walker, J.L.

    2001-01-01

    A major decline in submerged aquatic vegetation (SAV) in Chesapeake Bay has altered the diet of wintering Canvasbacks (Aythya valisineria) from historically plant to a combination of benthic animal foods, especially the ubiquitous Baltic clam (Macoma balthica), supplemented with anthropogenic corn (Zea mays). Because the isotopic signature of corn is readily discriminated from bay benthos, but not SAV, we used stable-isotope methodology to investigate the corn-SAV component of the winter diet of Canvasbacks. Feeding trials with penned Canvasbacks were conducted to establish turnover rates and fractionation end-point loci of *13C and *15N signatures of whole blood for individual ducks fed ad libitum diets of (1) Baltic clams, (2) Baltic clams and corn, and (3) tubers of wild celery (Vallisneria americana). Turnover time constants averaged 4.5 weeks, indicating that signatures of wild ducks would be representative of bay diets by late February. Isotopic signatures of wild Canvasbacks sampled in February fell on a continuum between end-point loci for the Baltic clam and the combination Baltic clam and corn diet. Although that finding verifies a clear dependence on corn-SAV for wintering Canvasbacks, it also reveals that not enough corn-SAV is available to establish ad libitum consumption for the 15,000+ Canvasbacks wintering in the upper bay. On the basis of mean *13C signature of bay Canvasbacks (n=59) and ingestion rates from feeding trials, we estimated that 258 kg corn per day would account for the observed *13C enrichment and supply 18% of daily energetic needs for 15,000 Canvasbacks. That level of corn availability is so realistic that we conclude that SAV is likely of little dietary importance to Canvasbacks in that portion of the bay.

  14. Fractional channel multichannel analyzer

    DOEpatents

    Brackenbush, Larry W.; Anderson, Gordon A.

    1994-01-01

    A multichannel analyzer incorporating the features of the present invention obtains the effect of fractional channels thus greatly reducing the number of actual channels necessary to record complex line spectra. This is accomplished by using an analog-to-digital converter in the asynscronous mode, i.e., the gate pulse from the pulse height-to-pulse width converter is not synchronized with the signal from a clock oscillator. This saves power and reduces the number of components required on the board to achieve the effect of radically expanding the number of channels without changing the circuit board.

  15. 76 FR 37641 - Safety Zone; Independence Day Fireworks Celebration for the City of Half Moon Bay, Half Moon Bay, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-28

    ... the City of Half Moon Bay, Half Moon Bay, CA AGENCY: Coast Guard, DHS. ACTION: Temporary final rule. SUMMARY: The Coast Guard is establishing a temporary safety zone in the navigable waters of Half Moon Bay, off of Pillar Point Harbor beach, Half Moon Bay, CA in support of the Independence Day...

  16. 33 CFR 167.101 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. 167.101 Section 167.101 Navigation and Navigable... the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Precautionary areas. (a) A...

  17. 77 FR 38005 - Eighth Coast Guard District Annual Safety Zones; Biloxi Bay Fireworks; Biloxi Bay; Biloxi, MS

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-26

    ... SECURITY Coast Guard 33 CFR Part 165 Eighth Coast Guard District Annual Safety Zones; Biloxi Bay Fireworks; Biloxi Bay; Biloxi, MS AGENCY: Coast Guard, DHS. ACTION: Notice of enforcement of regulation. ] SUMMARY: The Coast Guard will enforce a Safety Zone for the Biloxi Bay Fireworks event in Biloxi Bay,...

  18. 33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters CORPS OF ENGINEERS, DEPARTMENT OF THE ARMY, DEPARTMENT OF DEFENSE DANGER ZONE AND RESTRICTED AREA REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a)...

  19. 33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters CORPS OF ENGINEERS, DEPARTMENT OF THE ARMY, DEPARTMENT OF DEFENSE DANGER ZONE AND RESTRICTED AREA REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a)...

  20. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 46 Shipping 1 2011-10-01 2011-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  1. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 46 Shipping 1 2014-10-01 2014-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  2. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 46 Shipping 1 2013-10-01 2013-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  3. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 46 Shipping 1 2010-10-01 2010-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  4. A pollution history of Chesapeake Bay

    USGS Publications Warehouse

    Goldberg, E.D.; Hodge, V.; Koide, M.; Griffin, J.; Gamble, E.; Bricker, O.P.; Matisoff, G.; Holdren, G.R.; Braun, R.

    1978-01-01

    Present day anthropogenic fluxes of some heavy metals to central Chesapeake Bay appear to be intermediate to those of the southern California coastal region and those of Narragansett Bay. The natural fluxes, however, are in general higher. On the bases of Pb-210 and Pu-239 + 240 geochronologies and of the time changes in interstitial water compositions, there is a mixing of the upper 30 or so centimeters of the sediments in the mid-Chesapeake Bay area through bioturbation by burrowing mollusks and polychaetes. Coal, coke and charcoal levels reach one percent or more by dry weight in the deposits, primarily as a consequence of coal mining operations. ?? 1978.

  5. Pseudo-nitzschia spp. (Bacillariophyceae) and dissolved organic matter (DOM) dynamics in the Ebro Delta (Alfacs Bay, NW Mediterranean Sea)

    NASA Astrophysics Data System (ADS)

    Loureiro, Sofia; Garcés, Esther; Fernández-Tejedor, Margarita; Vaqué, Dolors; Camp, Jordi

    2009-08-01

    Samples were collected during one annual cycle (April 2007-March 2008) at Alfacs Bay (NW Mediterranean Sea) central station in order to assess the influence of organic nutrients in the growth of the microalgae assemblage, with special reference to Pseudo-nitzschia spp. This potentially toxic diatom forms natural and recurrent blooms in the study area. To assess further the relationship between Pseudo-nitzschia spp. and nutrients an enrichment experiment with high molecular weight dissolved organic matter (HMWDOM) was performed with field samples obtained during a Pseudo-nitzschia spp. bloom. HMWDOM was extracted from water collected at Alfacs Bay. Five bioassays were prepared: N + P (seawater with addition of nitrate and phosphate), DOM (addition of HMWDOM), (-N + P) + DOM (nitrogen deficient, with addition of phosphate and HMWDOM), (N + P) + DOM (addition of nitrate, phosphate and HMWDOM), seawater control (without added nutrients), and B + DOM (control of bacteria, without microalgae). The experiment was run in batch mode over 4 days. Results from the field study revealed that the concentrations of organic nutrients mostly surpassed the inorganic pool. Pseudo-nitzschia spp. was the most frequent and abundant taxa of the microalgae community. The micro-planktonic assemblage was arranged according to a seasonal factor (ANOSIM and cluster analysis). DON, nitrate and silicate were the most important abiotic parameters contributing to the dissimilarities between seasons (SIMPER analysis) and thereby potentially influencing the seasonal distribution of microalgae in the representative station. In the experimental investigation, Pseudo-nitzschia cells increased by the end of the experiment in the DOM bioassay but no respective increase was observed for chlorophyll a. This could point to an acquisition of nutrients through the DOM fraction that would conjointly reduce the need of chlorophyll a. The data obtained suggest that organic nutrients may exert an important role

  6. Chesapeake Bay Fall Line Toxics Monitoring Program: 1994 final report

    SciTech Connect

    1994-12-31

    The Fall Line Toxics Program for 1994 is a continuation of a long term effort to make accurate load estimates of contaminants entering the Chesapeake Bay from the non-tidal portion of the watershed. This program has identified nine major tributaries on which to make fall line load estimates. The 1994 Fall Line Toxics Program consisted of two components. First, the Susquehanna River was sampled from February 1994 through January 1995 during baseflow and stormflow conditions. Secondly, eight additional tributaries were sampled twice synoptically, once in Spring, 1994 and once in Fall, 1994. This report presents the results of both components. Samples were analyzed for dissolved and particulate fractions of trace elements and organic constituents. Concentration data and extensive quality assurance results are presented.

  7. Radionuclides in Chesapeake Bay sediments

    NASA Technical Reports Server (NTRS)

    Cressy, P. J., Jr.

    1976-01-01

    Natural and manmade gamma-ray emitting radionuclides were measured in Chesapeake Bay sediments taken near the Calvert Cliffs Nuclear Power Plant site. Samples represented several water depths, at six locations, for five dates encompassing a complete seasonal cycle. Radionuclide contents of dry sediments ranged as follows: Tl-208, 40 to 400 pCi/kg; Bi-214, 200 to 800 pCi/kg; K, 0.04 to 2.1 percent; Cs-137 5 to 1900 pCi/kg; Ru106, 40 to 1000 pCikg Co60, 1 to 27 pCi/kg. In general, radionuclide contents were positively correlated with each other and negatively correlated with sediment grain size.

  8. 33 CFR 165.1187 - Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. 165.1187 Section 165.1187... San Francisco-Oakland Bay Bridge, San Francisco Bay, California. (a) Location. All waters extending... Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, in San Francisco Bay, California....

  9. 33 CFR 165.1187 - Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. 165.1187 Section 165.1187... San Francisco-Oakland Bay Bridge, San Francisco Bay, California. (a) Location. All waters extending... Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, in San Francisco Bay, California....

  10. Fractional norm regularization: learning with very few relevant features.

    PubMed

    Kaban, Ata

    2013-06-01

    Learning in the presence of a large number of irrelevant features is an important problem in high-dimensional tasks. Previous studies have shown that L1-norm regularization can be effective in such cases while L2-norm regularization is not. Furthermore, work in compressed sensing suggests that regularization by nonconvex (e.g., fractional) semi-norms may outperform L1-regularization. However, for classification it is largely unclear when this may or may not be the case. In addition, the nonconvex problem is harder to solve than the convex L1 problem. In this paper, we provide a more in-depth analysis to elucidate the potential advantages and pitfalls of nonconvex regularization in the context of logistic regression where the regularization term employs the family of Lq semi-norms. First, using results from the phenomenon of concentration of norms and distances in high dimensions, we gain intuition about the working of sparse estimation when the dimensionality is very high. Second, using the probably approximately correct (PAC)-Bayes methodology, we give a data-dependent bound on the generalization error of Lq-regularized logistic regression, which is applicable to any algorithm that implements this model, and may be used to predict its generalization behavior from the training set alone. Third, we demonstrate the usefulness of our approach by experiments and applications, where the PAC-Bayes bound is used to guide the choice of semi-norm in the regularization term. The results support the conclusion that the optimal choice of regularization depends on the relative fraction of relevant versus irrelevant features, and a fractional norm with a small exponent is most suitable when the fraction of relevant features is very small.

  11. The Liverpool Bay Coastal Observatory

    NASA Astrophysics Data System (ADS)

    Howarth, John; Palmer, Matthew

    2011-11-01

    A pilot Coastal Observatory has been established in Liverpool Bay which integrates (near) real-time measurements with coupled models and whose results are displayed on the web. The aim is to understand the functioning of coastal seas, their response to natural forcing and the consequences of human activity. The eastern Irish Sea is an apt test site, since it encompasses a comprehensive range of processes found in tidally dominated coastal seas, including near-shore physical and biogeochemical processes influenced by estuarine inflows, where both vertical and horizontal gradients are important. Applications include hypernutrification, since the region receives significantly elevated levels of nutrient inputs, shoreline management (coastal flooding and beach erosion/accretion), and understanding present conditions to predict the impact of climate change (for instance if the number and severity of storms, or of high or low river flows, change). The integrated measurement suite which started in August 2002 covers a range of space and time scales. It includes in situ time series, four to six weekly regional water column surveys, an instrumented ferry, a shore-based HF radar system measuring surface currents and waves, coastal tide gauges and visible and infra-red satellite data. The time series enable definition of the seasonal cycle, its inter-annual variability and provide a baseline from which the relative importance of events can be quantified. A suite of nested 3D hydrodynamic, wave and ecosystem models is run daily, focusing on the observatory area by covering the ocean/shelf of northwest Europe (at 12-km resolution) and the Irish Sea (at 1.8 km), and Liverpool Bay at the highest resolution of 200 m. The measurements test the models against events as they happen in a truly 3D context. All measurements and model outputs are displayed freely on the Coastal Observatory website (http://cobs.pol.ac.uk) for an audience of researchers, education, coastal managers and the

  12. 'Victoria Crater' from 'Duck Bay'

    NASA Technical Reports Server (NTRS)

    2006-01-01

    NASA's Mars rover Opportunity edged 3.7 meters (12 feet) closer to the top of the 'Duck Bay' alcove along the rim of 'Victoria Crater' during the rover's 952nd Martian day, or sol (overnight Sept. 27 to Sept. 28), and gained this vista of the crater. The rover's navigation camera took the seven exposures combined into this mosaic view of the crater's interior. This crater has been the mission's long-term destination for the past 21 Earth months.

    The far side of the crater is about 800 meters (one-half mile) away. The rim of the crater is composed of alternating promontories, rocky points towering approximately 70 meters (230 feet) above the crater floor, and recessed alcoves, such as Duck Bay. The bottom of the crater is covered by sand that has been shaped into ripples by the Martian wind. The rocky cliffs in the foreground have been informally named 'Cape Verde,' on the left, and 'Cabo Frio,' on the right.

    Victoria Crater is about five times wider than 'Endurance Crater,' which Opportunity spent six months examining in 2004, and about 40 times wider than 'Eagle Crater,' where Opportunity first landed. The great lure of Victoria is an expectation that the thick stack of geological layers exposed in the crater walls could reveal the record of past environmental conditions over a much greater span of time than Opportunity has read from rocks examined earlier in the mission.

    This view is presented as a cylindrical projection with geometric seam correction.

  13. Fractionating human intelligence.

    PubMed

    Hampshire, Adam; Highfield, Roger R; Parkin, Beth L; Owen, Adrian M

    2012-12-20

    What makes one person more intellectually able than another? Can the entire distribution of human intelligence be accounted for by just one general factor? Is intelligence supported by a single neural system? Here, we provide a perspective on human intelligence that takes into account how general abilities or "factors" reflect the functional organization of the brain. By comparing factor models of individual differences in performance with factor models of brain functional organization, we demonstrate that different components of intelligence have their analogs in distinct brain networks. Using simulations based on neuroimaging data, we show that the higher-order factor "g" is accounted for by cognitive tasks corecruiting multiple networks. Finally, we confirm the independence of these components of intelligence by dissociating them using questionnaire variables. We propose that intelligence is an emergent property of anatomically distinct cognitive systems, each of which has its own capacity.

  14. BAY 11-7082 is a broad-spectrum inhibitor with anti-inflammatory activity against multiple targets.

    PubMed

    Lee, Jaehwi; Rhee, Man Hee; Kim, Eunji; Cho, Jae Youl

    2012-01-01

    BAY 11-7082 (BAY) is an inhibitor of κB kinase (IKK) that has pharmacological activities that include anticancer, neuroprotective, and anti-inflammatory effects. In this study, BAY-pharmacological target pathways were further characterized to determine how this compound simultaneously suppresses various responses. Primary and cancerous (RAW264.7 cells) macrophages were activated by lipopolysaccharide, a ligand of toll-like receptor 4. As reported previously, BAY strongly suppressed the production of nitric oxide, prostaglandin E(2), and tumor necrosis factor-α and reduced the translocation of p65, major subunit of nuclear factor-κB, and its upstream signaling events such as phosphorylation of IκBα, IKK, and Akt. In addition, BAY also suppressed the translocation and activation of activator protein-1, interferon regulatory factor-3, and signal transducer and activator of transcription-1 by inhibiting the phosphorylation or activation of extracellular signal-related kinase, p38, TANK-binding protein, and Janus kinase-2. These data strongly suggest that BAY is an inhibitor with multiple targets and could serve as a lead compound in developing strong anti-inflammatory drugs with multiple targets in inflammatory responses.

  15. BAY 11-7082 Is a Broad-Spectrum Inhibitor with Anti-Inflammatory Activity against Multiple Targets

    PubMed Central

    Lee, Jaehwi; Rhee, Man Hee; Kim, Eunji; Cho, Jae Youl

    2012-01-01

    BAY 11-7082 (BAY) is an inhibitor of κB kinase (IKK) that has pharmacological activities that include anticancer, neuroprotective, and anti-inflammatory effects. In this study, BAY-pharmacological target pathways were further characterized to determine how this compound simultaneously suppresses various responses. Primary and cancerous (RAW264.7 cells) macrophages were activated by lipopolysaccharide, a ligand of toll-like receptor 4. As reported previously, BAY strongly suppressed the production of nitric oxide, prostaglandin E2, and tumor necrosis factor-α and reduced the translocation of p65, major subunit of nuclear factor-κB, and its upstream signaling events such as phosphorylation of IκBα, IKK, and Akt. In addition, BAY also suppressed the translocation and activation of activator protein-1, interferon regulatory factor-3, and signal transducer and activator of transcription-1 by inhibiting the phosphorylation or activation of extracellular signal-related kinase, p38, TANK-binding protein, and Janus kinase-2. These data strongly suggest that BAY is an inhibitor with multiple targets and could serve as a lead compound in developing strong anti-inflammatory drugs with multiple targets in inflammatory responses. PMID:22745523

  16. Dependence of stability of metastable superconductors on copper fraction

    SciTech Connect

    Elrod, S. A.; Lue, J. W.; Miller, J. R.; Dresner, L.

    1980-12-01

    The stability of composite superconductors operating in the metastable regime depends upon such factors as matrix resistivity, cooled surface dimensions, fraction of critical current, and volume fraction of stabilizer. By assuming constant thermophysical properties, we developed analytic expressions for the energy and voltage of the minimum propagating zone (MPZ). With other factors held constant, these expressions have been used to predict composite superconductor stability as a function of copper fraction: lower copper fractions lead to higher MPZ energies. MPZ voltages have been measured for three NbTi/Cu composites having different copper fractions and different critical current densities for several magnetic fields and transport currents. Experimental MPZ voltages have been used to calculate an effective heat transfer coefficient, which is subsequently used to calculate the MPZ energy. The experimental MPZ energies support the theoretical expectation that lower copper fractions lead to higher stability in the metastable regime.

  17. What is a fractional derivative?

    NASA Astrophysics Data System (ADS)

    Ortigueira, Manuel D.; Tenreiro Machado, J. A.

    2015-07-01

    This paper discusses the concepts underlying the formulation of operators capable of being interpreted as fractional derivatives or fractional integrals. Two criteria for required by a fractional operator are formulated. The Grünwald-Letnikov, Riemann-Liouville and Caputo fractional derivatives and the Riesz potential are accessed in the light of the proposed criteria. A Leibniz rule is also obtained for the Riesz potential.

  18. Positive fractional linear electrical circuits

    NASA Astrophysics Data System (ADS)

    Kaczorek, Tadeusz

    2013-10-01

    The positive fractional linear systems and electrical circuits are addressed. New classes of fractional asymptotically stable and unstable electrical circuits are introduced. The Caputo and Riemann-Liouville definitions of fractional derivatives are used to analysis of the positive electrical circuits composed of resistors, capacitors, coils and voltage (current) sources. The positive fractional electrical and specially unstable different types electrical circuits are analyzed. Some open problems are formulated.

  19. Experimental observation of fractional echoes

    NASA Astrophysics Data System (ADS)

    Karras, G.; Hertz, E.; Billard, F.; Lavorel, B.; Siour, G.; Hartmann, J.-M.; Faucher, O.; Gershnabel, Erez; Prior, Yehiam; Averbukh, Ilya Sh.

    2016-09-01

    We report the observation of fractional echoes in a double-pulse excited nonlinear system. Unlike standard echoes, which appear periodically at delays which are integer multiples of the delay between the two exciting pulses, the fractional echoes appear at rational fractions of this delay. We discuss the mechanism leading to this phenomenon, and provide experimental demonstration of fractional echoes by measuring third harmonic generation in a thermal gas of CO2 molecules excited by a pair of femtosecond laser pulses.

  20. Fractional diffusion on bounded domains

    SciTech Connect

    Defterli, Ozlem; D'Elia, Marta; Du, Qiang; Gunzburger, Max Donald; Lehoucq, Richard B.; Meerschaert, Mark M.

    2015-03-13

    We found that the mathematically correct specification of a fractional differential equation on a bounded domain requires specification of appropriate boundary conditions, or their fractional analogue. In this paper we discuss the application of nonlocal diffusion theory to specify well-posed fractional diffusion equations on bounded domains.