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Sample records for fractional bayes factor

  1. Bayes factors and multimodel inference

    USGS Publications Warehouse

    Link, W.A.; Barker, R.J.; Thomson, David L.; Cooch, Evan G.; Conroy, Michael J.

    2009-01-01

    Multimodel inference has two main themes: model selection, and model averaging. Model averaging is a means of making inference conditional on a model set, rather than on a selected model, allowing formal recognition of the uncertainty associated with model choice. The Bayesian paradigm provides a natural framework for model averaging, and provides a context for evaluation of the commonly used AIC weights. We review Bayesian multimodel inference, noting the importance of Bayes factors. Noting the sensitivity of Bayes factors to the choice of priors on parameters, we define and propose nonpreferential priors as offering a reasonable standard for objective multimodel inference.

  2. Seasonal export fluxes of size-fractionated particulate derived from polonium-210: A case study in Xiamen Bay

    NASA Astrophysics Data System (ADS)

    Yang, Weifeng; Huang, Yipu; Chen, Min; Qiu, Yusheng

    2010-03-01

    Size-fractionated 210Po and 210Pb, in the size fractions >0.4 μm, >2 μm and >10 μm, were examined to determine the seasonal variability of particulate fluxes in Xiamen Bay. Good correlations between 210Po and particulate organic carbon (POC) or non-Particulate Organic Matter (nPOM) suggested that 210Po can be used to trace the export fluxes of POC and nPOM. Both steady-state (SS) model and nSS model were used to evaluate fluxes of size-fractionated 210Po, results showed that nSS model was better than the SS model in coastal areas. Based on the nSS model, size-fractionated POC fluxes decreased with increasing particle size. For the particle size studied, maximum POC fluxes occurred in autumn, followed by spring, winter, and summer. Fluxes of nPOM were an order of magnitude higher than the corresponding size-fractionated POC fluxes. Differences between size-fractionated nPOM fluxes indicated that hydrodynamic conditions were the main factor regulating transportation of particulate out of the inner Bay. In winter most particulates, including >10 μm particles, were transported under the strongest hydrodynamic conditions. In contrast, only a fraction of the <2 μm particulates were transported from the inner Bay in spring. This study suggested that 210Po is a powerful tracer of seasonal particulate export in coastal seas.

  3. Bayes factor of the ATLAS diphoton excess: Using Bayes factors to understand anomalies at the LHC

    NASA Astrophysics Data System (ADS)

    Fowlie, Andrew

    2017-01-01

    As an example of using Bayesian statistics in searches for new physics at the LHC, we present a calculation of Bayes factors for the erstwhile digamma resonance (digamma) versus the SM in light of ATLAS 8 TeV 20.3/fb, 13 TeV 3.2/fb and 13 TeV 15.4/fb data. We matched, wherever possible, parameterisations in the ATLAS analysis. We calculated that the plausibility of the digamma versus the Standard Model increased by about eight in light of the 8 TeV 20.3/fb and 13 TeV 3.2/fb ATLAS data, somewhat justifying interest in digamma models. All told, however, in light of 15.4/fb data, the digamma was disfavoured by about 0.7. We argue that Bayes factors could play an important role in future anomalies by clarifying the plausibility of new physics and sidestepping look-elsewhere effects.

  4. Unscaled Bayes factors for multiple hypothesis testing in microarray experiments.

    PubMed

    Bertolino, Francesco; Cabras, Stefano; Castellanos, Maria Eugenia; Racugno, Walter

    2015-12-01

    Multiple hypothesis testing collects a series of techniques usually based on p-values as a summary of the available evidence from many statistical tests. In hypothesis testing, under a Bayesian perspective, the evidence for a specified hypothesis against an alternative, conditionally on data, is given by the Bayes factor. In this study, we approach multiple hypothesis testing based on both Bayes factors and p-values, regarding multiple hypothesis testing as a multiple model selection problem. To obtain the Bayes factors we assume default priors that are typically improper. In this case, the Bayes factor is usually undetermined due to the ratio of prior pseudo-constants. We show that ignoring prior pseudo-constants leads to unscaled Bayes factor which do not invalidate the inferential procedure in multiple hypothesis testing, because they are used within a comparative scheme. In fact, using partial information from the p-values, we are able to approximate the sampling null distribution of the unscaled Bayes factor and use it within Efron's multiple testing procedure. The simulation study suggests that under normal sampling model and even with small sample sizes, our approach provides false positive and false negative proportions that are less than other common multiple hypothesis testing approaches based only on p-values. The proposed procedure is illustrated in two simulation studies, and the advantages of its use are showed in the analysis of two microarray experiments.

  5. A Bayes factor meta-analysis of Bem's ESP claim.

    PubMed

    Rouder, Jeffrey N; Morey, Richard D

    2011-08-01

    In recent years, statisticians and psychologists have provided the critique that p-values do not capture the evidence afforded by data and are, consequently, ill suited for analysis in scientific endeavors. The issue is particular salient in the assessment of the recent evidence provided for ESP by Bem (2011) in the mainstream Journal of Personality and Social Psychology. Wagenmakers, Wetzels, Borsboom, and van der Maas (Journal of Personality and Social Psychology, 100, 426-432, 2011) have provided an alternative Bayes factor assessment of Bem's data, but their assessment was limited to examining each experiment in isolation. We show here that the variant of the Bayes factor employed by Wagenmakers et al. is inappropriate for making assessments across multiple experiments, and cannot be used to gain an accurate assessment of the total evidence in Bem's data. We develop a meta-analytic Bayes factor that describes how researchers should update their prior beliefs about the odds of hypotheses in light of data across several experiments. We find that the evidence that people can feel the future with neutral and erotic stimuli to be slight, with Bayes factors of 3.23 and 1.57, respectively. There is some evidence, however, for the hypothesis that people can feel the future with emotionally valenced nonerotic stimuli, with a Bayes factor of about 40. Although this value is certainly noteworthy, we believe it is orders of magnitude lower than what is required to overcome appropriate skepticism of ESP.

  6. Nonparametric Bayes Factors Based On Empirical Likelihood Ratios

    PubMed Central

    Vexler, Albert; Deng, Wei; Wilding, Gregory E.

    2012-01-01

    Bayes methodology provides posterior distribution functions based on parametric likelihoods adjusted for prior distributions. A distribution-free alternative to the parametric likelihood is use of empirical likelihood (EL) techniques, well known in the context of nonparametric testing of statistical hypotheses. Empirical likelihoods have been shown to exhibit many of the properties of conventional parametric likelihoods. In this article, we propose and examine Bayes factors (BF) methods that are derived via the EL ratio approach. Following Kass & Wasserman [10], we consider Bayes factors type decision rules in the context of standard statistical testing techniques. We show that the asymptotic properties of the proposed procedure are similar to the classical BF’s asymptotic operating characteristics. Although we focus on hypothesis testing, the proposed approach also yields confidence interval estimators of unknown parameters. Monte Carlo simulations were conducted to evaluate the theoretical results as well as to demonstrate the power of the proposed test. PMID:23180904

  7. Bayes factor design analysis: Planning for compelling evidence.

    PubMed

    Schönbrodt, Felix D; Wagenmakers, Eric-Jan

    2017-03-01

    A sizeable literature exists on the use of frequentist power analysis in the null-hypothesis significance testing (NHST) paradigm to facilitate the design of informative experiments. In contrast, there is almost no literature that discusses the design of experiments when Bayes factors (BFs) are used as a measure of evidence. Here we explore Bayes Factor Design Analysis (BFDA) as a useful tool to design studies for maximum efficiency and informativeness. We elaborate on three possible BF designs, (a) a fixed-n design, (b) an open-ended Sequential Bayes Factor (SBF) design, where researchers can test after each participant and can stop data collection whenever there is strong evidence for either [Formula: see text] or [Formula: see text], and (c) a modified SBF design that defines a maximal sample size where data collection is stopped regardless of the current state of evidence. We demonstrate how the properties of each design (i.e., expected strength of evidence, expected sample size, expected probability of misleading evidence, expected probability of weak evidence) can be evaluated using Monte Carlo simulations and equip researchers with the necessary information to compute their own Bayesian design analyses.

  8. Molecular size fractions of bay leaf (Laurus nobilis) exhibit differentiated regulation of colorectal cancer cell growth in vitro.

    PubMed

    Bennett, Louise; Abeywardena, Mahinda; Burnard, Sharon; Forsyth, Santina; Head, Richard; King, Kerryn; Patten, Glen; Watkins, Peter; Williams, Roderick; Zabaras, Dimitrios; Lockett, Trevor

    2013-01-01

    Numerous in vitro studies using solvent or aqueous extracts of raw dietary plant material have demonstrated modulation of colon cancer cell growth and apoptosis and effects on immune and nonimmune pathways of inflammation. We have developed a generic, 3-staged food-compatible process involving heating for conversion of dietary plants into food ingredients and report results on potential colon cancer-regulating properties of processed forms of Bay leaf (Laurus nobilis). In vitro studies demonstrated inhibition of cancer cell growth by processed Bay leaf products in HT-29, HCT-116, Caco-2, and SW-480 human cancer cell lines, which were accompanied by variable levels of elevated apoptosis. Bay leaf also exerted moderate inhibition of cycloxygenase 2 and 5 lipoxygenase enzymatic activity. In addition, these extracts significantly downregulated interferon-γ production in T helper Type 1-stimulated whole blood from healthy donors. Furthermore, size fractionation of the extracts revealed that antiproliferative and proapoptotic activities were associated with low mass (primarily polyphenolics and essential oils) and high mass (primarily proteins including polyphenol oxidase) chemical classes, respectively. Bay leaf exerted in vitro bioactivity that might be relevant to protecting against early events in sporadic colorectal cancer, with potential for further optimization of bioactivity by size-based fractionation.

  9. Metal pollution in a contaminated bay: relationship between metal geochemical fractionation in sediments and accumulation in a polychaete.

    PubMed

    Fan, Wenhong; Xu, Zhizhen; Wang, Wen-Xiong

    2014-08-01

    Jinzhou Bay in Northern China has been seriously contaminated with metals due to the impacts of smelting activities. In this study, we investigated the relationship between metal accumulation in a deposit-feeding polychaete Neanthes japonica and metal concentration and geochemical fractionation (Cd, Cu, Pb, Zn and Ni) in sediments of Jinzhou Bay. Compared with the historical data, metals in the more mobile geochemical fraction (exchangeable and carbonate fractions) were gradually partitioned into the more stable fraction (Fe-Mn oxides) over time. Metal concentration and geochemical fractionation in sediment significantly affected metal bioavailability and accumulation in polychaetes, except for Ni. Metal accumulation in polychaetes was significantly influenced by Fe or Mn content, and to a lesser degree by organic matter. Prediction of metal bioaccumulation in polychaetes was greatly improved by normalizing metal concentrations to Mn content in sediment. The geochemical fractionation of metals in sediments including the exchangeable, organic matter and Fe-Mn oxides were important in controlling the sediment metal bioavailability to polychaetes.

  10. What Are the Odds? A Practical Guide to Computing and Reporting Bayes Factors

    ERIC Educational Resources Information Center

    Jarosz, Andrew F.; Wiley, Jennifer

    2014-01-01

    The purpose of this paper is to provide an easy template for the inclusion of the Bayes factor in reporting experimental results, particularly as a recommendation for articles in the "Journal of Problem Solving." The Bayes factor provides information with a similar purpose to the "p"-value--to allow the researcher to make…

  11. Dynamics of REE accumulation and fractionation in the subcolloidal fraction of bottom sediments in the Razdol'naya River-Amur Bay section, Sea of Japan

    NASA Astrophysics Data System (ADS)

    Polyakov, D. M.

    2016-05-01

    The REE contents (La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu) are determined by atomic emission spectroscopy in the subcolloidal fraction of bottom sediments in the Razdol'naya River-Amur Bay section. The mean contents of lanthanides in soils and river bottom sediments (before the mixing zone) are calculated. The increase in REE content and the fractioning in the series from light to middle and heavy REE in sediments of different estuary zones (river, water mixing, and marine), with the latter related to flocculation, sorption on iron and manganese hydroxides, clay minerals (hydromica, smectites), and lifetime accumulation of marine plankton, are dtermined. Via extraction of 0.5 N sodium hydroxide solution, the content of lanthanides associated with humic substances of subcolloidal fraction from the Amur Bay sediments are determined: 1.3 to 8.2% of La; 1.1 to 11% of Ce; and 0.3 to 1.5 of Gd.

  12. Bayes factor for investigative assessment of selected handwriting features.

    PubMed

    Taroni, F; Marquis, R; Schmittbuhl, M; Biedermann, A; Thiéry, A; Bozza, S

    2014-09-01

    This paper extends previous research on the use of multivariate continuous data in comparative handwriting examinations, notably for gender classification. A database has been constructed by analyzing the contour shape of loop characters of type a and d by means of Fourier analysis, which allows characters to be described in a global way by a set of variables (e.g., Fourier descriptors). Sample handwritings were collected from right- and left-handed female and male writers. The results reported in this paper provide further arguments in support of the view that investigative settings in forensic science represent an area of application for which the Bayesian approach offers a logical framework. In particular, the Bayes factor is computed for settings that focus on inference of gender and handedness of the author of an incriminated handwritten text. An emphasis is placed on comparing the efficiency for investigative purposes of characters a and d.

  13. Antidiabetic Activity of Self Nanoemulsifying Drug Delivery System from Bay Leaves (Eugenia polyantha Wight) Ethyl Acetate Fraction

    NASA Astrophysics Data System (ADS)

    Prihapsara, F.; Harini, M.; Widiyani, T.; Artanti, A. N.; Ani, I. L.

    2017-02-01

    Insulin resistance is caused by inability of target tissues to insulin response. Bay leaves (Eugenia polyantha Wight) fraction or extract have been used for the treatment of antidibetic mellitus type-2 resistance insulin (ADMRI) but it has low solubility and bioavailability. To overcome these problems, ethyl acetate fraction of bay leaves was formulated into self nanoemulsifying drug delivery system (SNEDDS) using Virgin Coconut Oil (VCO) as a carrier oil. This study aims to produce nanoherbal medicine, determine effect of nanoherbal preparation derived from bay leaves as an anti-ADMRI. The results showed that the optimum SNEDDS formula was tween 80 : PEG 400 : Virgin Coconut Oil (30% : 60% : 10%) in 5 mL. It has emulsification time 13.00 seconds with the average of droplet size value 84.5 nanometer and zeta potential value ± 0.2 mV. Morphological observation showed the nanoemulsion particles has spherical shaped and stable in different pH media. Hypoglycaemic effect of single dose metformin, SNEDDS, combination a-half dose of SNEEDS with metformin value is 28.3%; 15.6%; 34.6% respectively.

  14. Using Bayes factors for testing hypotheses about intervention effectiveness in addictions research

    PubMed Central

    Dienes, Zoltan; Muirhead, Colin; West, Robert

    2016-01-01

    Abstract Background and Aims It has been proposed that more use should be made of Bayes factors in hypothesis testing in addiction research. Bayes factors are the ratios of the likelihood of a specified hypothesis (e.g. an intervention effect within a given range) to another hypothesis (e.g. no effect). They are particularly important for differentiating lack of strong evidence for an effect and evidence for lack of an effect. This paper reviewed randomized trials reported in Addiction between January and June 2013 to assess how far Bayes factors might improve the interpretation of the data. Methods Seventy‐five effect sizes and their standard errors were extracted from 12 trials. Seventy‐three per cent (n = 55) of these were non‐significant (i.e. P > 0.05). For each non‐significant finding a Bayes factor was calculated using a population effect derived from previous research. In sensitivity analyses, a further two Bayes factors were calculated assuming clinically meaningful and plausible ranges around this population effect. Results Twenty per cent (n = 11) of the non‐significant Bayes factors were < ⅓ and 3.6% (n = 2) were > 3. The other 76.4% (n = 42) of Bayes factors were between ⅓ and 3. Of these, 26 were in the direction of there being an effect (Bayes factor > 1 and < 3); 12 tended to favour the hypothesis of no effect (Bayes factor < 1 and > ⅓); and for four there was no evidence either way (Bayes factor = 1). In sensitivity analyses, 13.3% of Bayes Factors were < ⅓ (n = 20), 62.7% (n = 94) were between ⅓ and 3 and 24.0% (n = 36) were > 3, showing good concordance with the main results. Conclusions Use of Bayes factors when analysing data from randomized trials of interventions in addiction research can provide important information that would lead to more precise conclusions than are obtained typically using currently prevailing methods. PMID:27347846

  15. Comparison of objective Bayes factors for variable selection in parametric regression models for survival analysis.

    PubMed

    Cabras, Stefano; Castellanos, Maria Eugenia; Perra, Silvia

    2014-11-20

    This paper considers the problem of selecting a set of regressors when the response variable is distributed according to a specified parametric model and observations are censored. Under a Bayesian perspective, the most widely used tools are Bayes factors (BFs), which are undefined when improper priors are used. In order to overcome this issue, fractional (FBF) and intrinsic (IBF) BFs have become common tools for model selection. Both depend on the size, Nt , of a minimal training sample (MTS), while the IBF also depends on the specific MTS used. In the case of regression with censored data, the definition of an MTS is problematic because only uncensored data allow to turn the improper prior into a proper posterior and also because full exploration of the space of the MTSs, which includes also censored observations, is needed to avoid bias in model selection. To address this concern, a sequential MTS was proposed, but it has the drawback of an increase of the number of possible MTSs as Nt becomes random. For this reason, we explore the behaviour of the FBF, contextualizing its definition to censored data. We show that these are consistent, providing also the corresponding fractional prior. Finally, a large simulation study and an application to real data are used to compare IBF, FBF and the well-known Bayesian information criterion.

  16. Data integration in physiology using Bayes' rule and minimum Bayes' factors: deubiquitylating enzymes in the renal collecting duct.

    PubMed

    Xue, Zhe; Chen, Jia-Xu; Zhao, Yue; Medvar, Barbara; Knepper, Mark A

    2017-03-01

    A major challenge in physiology is to exploit the many large-scale data sets available from "-omic" studies to seek answers to key physiological questions. In previous studies, Bayes' theorem has been used for this purpose. This approach requires a means to map continuously distributed experimental data to probabilities (likelihood values) to derive posterior probabilities from the combination of prior probabilities and new data. Here, we introduce the use of minimum Bayes' factors for this purpose and illustrate the approach by addressing a physiological question, "Which deubiquitylating enzymes (DUBs) encoded by mammalian genomes are most likely to regulate plasma membrane transport processes in renal cortical collecting duct principal cells?" To do this, we have created a comprehensive online database of 110 DUBs present in the mammalian genome (https://hpcwebapps.cit.nih.gov/ESBL/Database/DUBs/). We used Bayes' theorem to integrate available information from large-scale data sets derived from proteomic and transcriptomic studies of renal collecting duct cells to rank the 110 known DUBs with regard to likelihood of interacting with and regulating transport processes. The top-ranked DUBs were OTUB1, USP14, PSMD7, PSMD14, USP7, USP9X, OTUD4, USP10, and UCHL5. Among these USP7, USP9X, OTUD4, and USP10 are known to be involved in endosomal trafficking and have potential roles in endosomal recycling of plasma membrane proteins in the mammalian cortical collecting duct.

  17. Rare earth elements in intertidal sediments of Bohai Bay, China: concentration, fractionation and the influence of sediment texture.

    PubMed

    Zhang, Yong; Gao, Xuelu; Arthur Chen, Chen-Tung

    2014-07-01

    Surface sediments from intertidal Bohai Bay were assessed using a four-step sequential extraction procedure to determine their concentrations of rare earth elements (REEs) and the chemical forms in which those elements were present. The normalized ratios La/Gd and La/Yb showed that LREE contents were not significantly higher than the middle REEs or HREE contents. A negative Ce anomaly and positive Eu were observed in sand and silty sand sediments, whereas no significant Ce or Eu anomaly was found in clayey silt sediments. Residual fraction of REEs accounted for the majority of their total concentrations. Middle REEs were more easily leached than other REEs, especially in clayey silt sediment. REEs contents in the surface sediment from the intertidal Bohai Sea were consistent with data from the upper continental crust and China shallow sea sediments, indicating that they were generally unaffected by heavily anthropogenic effects from adjacent areas.

  18. Chesapeake Bay recovery and factors affecting trends: Long-termmonitoring, indicators, and insights

    USGS Publications Warehouse

    Tango, Peter J.; Batiuk, Richard A.

    2016-01-01

    Monitoring the outcome of restoration efforts is the only way to identify the status of a recovery and the most effective management strategies. In this paper, we discuss Chesapeake Bay and watershed recovery and factors influencing water quality trends. For over 30 years, the Chesapeake Bay Program Partnership’s long-term tidal and watershed water quality monitoring networks have measured physical, chemical and biological parameters throughout the bay and its surrounding watershed underpinning an adaptive management process to drive ecosystem recovery. There are many natural and anthropogenic factors operating and interacting to affect the watershed and bay water quality recovery responses to management actions. Across habitats and indicators, the bay and its watershed continue to express a diverse spatial and temporal fabric of multiscale conditions, stressors and trends that show a range of health conditions and impairments, as well as evidence of progress and degradation. Recurrent independent reviews of the monitoring program have driven a culture of continued adaptation of the monitoring networks to reflect ever evolving management information needs. The adherence to bay and watershed-wide consistent monitoring protocols provides monitoring data supporting analyses and development of scientific syntheses that underpin indicator and model development, regulatory assessments, targeting of management actions, evaluation of management effectiveness, and directing of priorities and policies.

  19. Theoretical prediction for several important equilibrium Ge isotope fractionation factors

    NASA Astrophysics Data System (ADS)

    Tang, M.; Li, X.; Liu, Y.

    2008-12-01

    As a newly emerging field, the stable isotope geochemistry of germanium (Ge) needs basic equilibrium fractionation factors to explore its unknown world. In this study, the Ge isotope fractionations between systems including the aqueous Ge(OH)4 and GeO(OH)3- which are the dominant Ge species in seawater, the Ge-bearing organic complexes (e.g. Ge-catechol, Ge-oxalic acid and Ge-citric acid), the quartz- (or opal- ), albite-, K-feldspar- and olivine- like mineral structures are studied. It is the first time that some geologically important equilibrium Ge isotope fractionation factors are reported. Surprisingly, up to 5 per mil large isotopic fractionations between these Ge isotope systems are found at 25 degree. These results suggest a potentially broad application for the Ge isotope geochemistry. Our theoretical calculations are based on the Urey model (or Bigeleisen-Mayer equation) and high level quantum chemistry calculations. The B3LYP/6-311+G(d,p) level quantum chemistry method and the explicit solvent model ("water droplet" method) are used. Many different conformers are also used for the aqueous complexes in order to reduce the possible errors coming from the differences of configurations in solution. The accuracy of our calculation of the Ge isotopic fractionations is estimated about 0.2 per mil. Our results show quartz-like or opal-like structure can enrich most heavy Ge isotopes. Relative to quartz (or opal), some Ge isotopic fractionations are (at 25 C): quartz-organic Ge = 4-5,quartz-Ge(OH)4 =0.9,quartz-GeO(OH)3- =1.5,quartz-albite=0.6,quartz-K-feldspar=0.4 and quartz-olivine=3.9 per mil. The large fractionations between inorganic Ge complexes and organic Ge ones could be used to distinguish the possible bio-involving processes. Our results suggest a good explanation to the experimental observations of Siebert et al. (2006) and Rouxel et al. (2006) and provide important constraints to the study of Ge cycle in ocean.

  20. Iron isotopic fractionation factor between magnetite and hydrous silicic melt

    NASA Astrophysics Data System (ADS)

    Huang, F.; Lundstrom, C. C.

    2006-12-01

    A "thermal migration" experiment was conducted in the piston cylinder to investigate the changes in composition of a wet andesitic bulk composition in a temperature gradient at 0.5 GPa. A homogeneous andesite powder (AGV-1 containing 4 wt.% H2O was sealed in a AuPd double capsule with the hot end at 950°C and the bottom end 350°C for 66 days. The charge changes from 100% melt at the top to the progressively more crystalline with the sequential appearance of apatite, magnetite, amphibole, biotite, plagioclase, quartz, and K-feldspar. We microdrilled 5 samples along the temperature gradient and analyzed these for Fe isotope ratios by double spike MC-ICP-MS at UIUC. Results show that the 100% melt area is depleted in heavy Fe isotopes relative to all more crystalline portions of the experiment (4 samples) with the offset in {δ}^{56/54}FeIRMM of about 1.7‰. This does not appear to reflect Fe loss in the experiment as the Fe content and isotopes mass balance and no detectable Fe was found in the capsule after the experiment. Instead the offset is interpreted to reflect the combination of diffusive fractionation of Fe moving by diffusion and possible equilibrium fractionations between melt and magnetite that occurs throughout the crystalline portion of the experiment. However, both the isotopic fractionation factor between magnetite and melt and the effect of diffusion on Fe isotopes remains unknown. We are currently investigating Fe isotopic fractionation factor between magnetite and melt and effects of melt diffusion on Fe isotopes. To assess diffusion, we will microdrill and analyze melt-melt diffusion couples from Lundstrom(G-Cubed, 2003). To assess magnetite-melt fractionation, we have begun piston cylinder experiments at 0.5 GPa and 800°C using a starting material synthesized based on the melt composition within the thermal migration experiment. Initial experiments produce a layer of 100% melt on top of a 2-phase mush of magnetite-melt. This will allow

  1. DESICCATION AND OTHER FACTORS AFFECTING THE UPPER INTERTIDAL DISTRIBUTION OF EELGRASS IN YAQUINA BAY, OR

    EPA Science Inventory

    Eelgrass (Zostera marina) in Pacific Northwest is primarily intertidal, yet little research has been done on what factors control its upper intertidal growth boundary. In July 2000 a two year study was initiated in Yaquina Bay (Newport, OR) to evaluate the effects of four factor...

  2. Toxicity of creosote water-soluble fractions generated from contaminated sediments to the bay mysid.

    PubMed

    Padma, T V; Hale, R C; Roberts, M H; Lipcius, R N

    1999-02-01

    Creosote, a globally used wood preservative, is a complex mixture consisting primarily of aromatic organic compounds (ACs). Creosote-derived ACs can persist for decades in aquatic sediments. Natural and anthropogenic activities may result in dissolution and resuspension of sediment-associated ACs. These processes were mimicked by generating a water-soluble fraction (WSF) from creosote-contaminated sediment (ERS) collected from a polluted site. The epibenthic mysid Mysidopsis bahia was exposed to five sublethal concentrations of WSF for 7 days. The WSF significantly decreased dry weight gain and proportion of gravid females (EC50=15 microgram/liter total identified ACs). Chemical analysis indicated that high-molecular-weight ACs (more than three aromatic rings) dominated the ERS, but were undetected in the WSF. Low-molecular-weight ACs (fewer than three aromatic rings) dominated the WSF. Compositional differences can thus result from fractionation processes and affect environmental fate and toxicity of the mixture.

  3. Species delimitation using Bayes factors: simulations and application to the Sceloporus scalaris species group (Squamata: Phrynosomatidae).

    PubMed

    Grummer, Jared A; Bryson, Robert W; Reeder, Tod W

    2014-03-01

    Current molecular methods of species delimitation are limited by the types of species delimitation models and scenarios that can be tested. Bayes factors allow for more flexibility in testing non-nested species delimitation models and hypotheses of individual assignment to alternative lineages. Here, we examined the efficacy of Bayes factors in delimiting species through simulations and empirical data from the Sceloporus scalaris species group. Marginal-likelihood scores of competing species delimitation models, from which Bayes factor values were compared, were estimated with four different methods: harmonic mean estimation (HME), smoothed harmonic mean estimation (sHME), path-sampling/thermodynamic integration (PS), and stepping-stone (SS) analysis. We also performed model selection using a posterior simulation-based analog of the Akaike information criterion through Markov chain Monte Carlo analysis (AICM). Bayes factor species delimitation results from the empirical data were then compared with results from the reversible-jump MCMC (rjMCMC) coalescent-based species delimitation method Bayesian Phylogenetics and Phylogeography (BP&P). Simulation results show that HME and sHME perform poorly compared with PS and SS marginal-likelihood estimators when identifying the true species delimitation model. Furthermore, Bayes factor delimitation (BFD) of species showed improved performance when species limits are tested by reassigning individuals between species, as opposed to either lumping or splitting lineages. In the empirical data, BFD through PS and SS analyses, as well as the rjMCMC method, each provide support for the recognition of all scalaris group taxa as independent evolutionary lineages. Bayes factor species delimitation and BP&P also support the recognition of three previously undescribed lineages. In both simulated and empirical data sets, harmonic and smoothed harmonic mean marginal-likelihood estimators provided much higher marginal-likelihood estimates

  4. Spatial distribution and controlling factors of sedimentary bodies in Jiaozhou Bay and Adjacent Sea Areas, Qingdao

    NASA Astrophysics Data System (ADS)

    Dong, Heping; Li, Guangxue; Li, Shuanglin; Li, Shaoquan; Li, Chun

    2011-06-01

    The distributions of thickness of unconsolidated Quaternary sedimentary layers in Jiaozhou Bay and Qingdao offshore area were studied by using 1079-km high-resolution shallow seismic profiles and drilling core data, and the factors controlling the Quaternary evolution were discussed. The results show that such thickness distributions resulted from the coactions of geologic structures and marine hydrodynamic conditions since the Holocene. The geologic structures controlled the slope deposit, proluvial and fluvial fillings since the late Pleistocene. Holocene marine hydrodynamics eroded away sediments at the bay mouth, and tides carried these eroded materials to the sides of the bay mouth and released them there, forming channel-ridge-alternating geomorphic features. During transgressive processes, the sea level rose rapidly, and insufficient sediment supply and tidal actions yielded the relict sediments in the east of Qingdao offshore area.

  5. Bayes factor between Student t and Gaussian mixed models within an animal breeding context

    PubMed Central

    Casellas, Joaquim; Ibáñez-Escriche, Noelia; García-Cortés, Luis Alberto; Varona, Luis

    2008-01-01

    The implementation of Student t mixed models in animal breeding has been suggested as a useful statistical tool to effectively mute the impact of preferential treatment or other sources of outliers in field data. Nevertheless, these additional sources of variation are undeclared and we do not know whether a Student t mixed model is required or if a standard, and less parameterized, Gaussian mixed model would be sufficient to serve the intended purpose. Within this context, our aim was to develop the Bayes factor between two nested models that only differed in a bounded variable in order to easily compare a Student t and a Gaussian mixed model. It is important to highlight that the Student t density converges to a Gaussian process when degrees of freedom tend to infinity. The twomodels can then be viewed as nested models that differ in terms of degrees of freedom. The Bayes factor can be easily calculated from the output of a Markov chain Monte Carlo sampling of the complex model (Student t mixed model). The performance of this Bayes factor was tested under simulation and on a real dataset, using the deviation information criterion (DIC) as the standard reference criterion. The two statistical tools showed similar trends along the parameter space, although the Bayes factor appeared to be the more conservative. There was considerable evidence favoring the Student t mixed model for data sets simulated under Student t processes with limited degrees of freedom, and moderate advantages associated with using the Gaussian mixed model when working with datasets simulated with 50 or more degrees of freedom. For the analysis of real data (weight of Pietrain pigs at six months), both the Bayes factor and DIC slightly favored the Student t mixed model, with there being a reduced incidence of outlier individuals in this population. PMID:18558073

  6. [Distribution, seasonal variation and influence factors of dissolved inorganic arsenic in the Sanggou Bay].

    PubMed

    Li, Lei; Ren, Jing-Ling; Liu, Su-Mei; Jiang, Zeng-Jie; Du, Jin-Zhou; Fang, Jian-Guang

    2014-07-01

    The biogeochemical behavior of arsenic in the aquatic environment has already captured the attentions of scientists due to its complex forms and toxicity. Four cruises were carried out in April, August, October 2011 and January 2012 in the Sanggou Bay. The concentrations of total dissolved inorganic arsenic (TDIAs, TDIAs = [ As(5+] + [As(3+)]) and arsenite (As(3+)) were measured by Hydride Generation-Atomic Fluorescence Spectrometry (HG-AFS). The concentrations of TDIAs ranged from 3.4-12.4 nmol x L(-1) in April, 8.9-16.9 nmol x L(-1) in August, 14.7-21.3 nmol x L(-1) in October and 13.8-21.9 nmol x L(-1) in January. The concentrations of arsenite ranged from 0.3-2.1 nmol x L(-1), 0.4-3.8 nmol x L(-1), 1.8-4.0 nmol x L(-1) and 0.3-2.9 nmol x L(-1) during four cruises, respectively. The concentrations of TDIAs in spring and summer were lower than those in autumn and winter, and high values of TDIAs appeared in the bay-mouth and the coastal estuary. The concentrations of arsenite in spring and winter were lower than those in summer and autumn. The maximum As(3+)/TDIAs ratios appeared in summer. The mean value of TDIAs in the Sanggou Bay was (13.9 +/- 4.7) nmol x L(-1), which was lower than the national primary drinking in water Standards from USEPA and met the first grade water quality based on the environmental quality standards for surface water of China. It indicates that there is no obvious anthropogenic pollution. The concentrations of TDIAs in the Sanggou Bay were lower than those in the Ailian Bay and the Lidao Bay in spring and summer due to the different hydrological environments and terrestrial inputs. Riverine input, incursion of Yellow Sea and biological activities were the three main factors impacting the distribution of TDIAs in the Sanggou Bay, and the influence of aquaculture activities was particularly significant. The enrichment of arsenic by aquaculture may lead to potential ecological crisis and food safety problems, and need to be paid more

  7. Factors Influencing Spatial and Annual Variability in Eelgrass (Zostera marina L.) Meadows in Willapa Bay, Washington, and Coos Bay, Oregon, Estuaries

    SciTech Connect

    Thom, Ronald M.; Borde, Amy B.; Rumrill, Steven; Woodruff, Dana L.; Williams, Greg D.; Southard, John A.; Sargeant, Susan L.

    2003-08-01

    Environmental factors that influence annual variability and spatial differences in eelgrass meadows (Zostera marina L.) were examined within Willapa Bay, WA, and Coos Bay, OR, over a period of 4 years (1998-2001). A suite of eelgrass metrics were recorded annually at field sites that spanned the estuarine gradient from the marine-dominated to mesohaline regions. Growth of eelgrass plants was also monitored on a monthly basis within Sequim Bay, WA. Both the spatial cover and density of Z. marina were positively correlated with estuarine salinity and inversely correlated with temperature of the tideflat sediment. Experimental evidence verified that optimal eelgrass growth occurred at highest salinities and relatively low temperatures. Eelgrass density, biomass, and the incident of flowering plants all increased substantially in Willapa Bay, and less so in Coos Bay, over the duration of the study. Warmer winters and cooler summers associated with the transition from El Ni?o to La Ni?a ocean conditions during the study period were correlated with the increase in eelgrass abundance and flowering. Anthropogenic factors (e.g., disturbance and erosion by vessel wakes and recreational shellfishing activities) may have contributed to spatial variability. Our findings indicate that large-scale changes in climate and nearshore ocean conditions can exert a strong regional influence on eelgrass abundance, which can vary annually by as much as 700% in Willapa Bay. Lower levels of variability observed in Coos Bay may be due to the stronger and more direct influence of the nearshore Pacific Ocean. We conclude that climate variation may have profound effects on the abundance and distribution of eelgrass meadows throughout the Pacific Northwest, and we anticipate that ocean conditions will emerge as a primary driving force for living estuarine resources and ecological processes that are associated with Z. marina beds within the landscape of these estuarine tidal basins.

  8. A Test By Any Other Name: P-values, Bayes Factors and Statistical Inference

    PubMed Central

    Stern, Hal S.

    2016-01-01

    The exchange between Hoitjink, van Kooten and Hulsker (in press) (HKH) and Morey, Wagenmakers, and Rouder (in press) (MWR) in this issue is focused on the use of Bayes factors for statistical inference but raises a number of more general questions about Bayesian and frequentist approaches to inference. This note addresses recent negative attention directed at p-values, the relationship of confidence intervals and tests, and the role of Bayesian inference and Bayes factors, with an eye towards better understanding these different strategies for statistical inference. We argue that researchers and data analysts too often resort to binary decisions (e.g., whether to reject or accept the null hypothesis) in settings where this may not be required. PMID:26881954

  9. Bayes factors for genome-wide association studies: comparison with P-values.

    PubMed

    Wakefield, Jon

    2009-01-01

    The Bayes factor is a summary measure that provides an alternative to the P-value for the ranking of associations, or the flagging of associations as "significant". We describe an approximate Bayes factor that is straightforward to use and is appropriate when sample sizes are large. We consider various choices of the prior on the effect size, including those that allow effect size to vary with the minor allele frequency (MAF) of the marker. An important contribution is the description of a specific prior that gives identical rankings between Bayes factors and P-values, providing a link between the two approaches, and allowing the implications of the use of P-values to be more easily understood. As a summary measure of noteworthiness P-values are difficult to calibrate since their interpretation depends on MAF and, crucially, on sample size. A consequence is that a consistent decision-making procedure using P-values requires a threshold for significance that reduces with sample size, contrary to common practice.

  10. Derivation of a Bayes factor to distinguish between linked or pleiotropic quantitative trait loci.

    PubMed Central

    Varona, L; Gómez-Raya, L; Rauw, W M; Clop, A; Ovilo, C; Noguera, J L

    2004-01-01

    A simple procedure to calculate the Bayes factor between linked and pleiotropic QTL models is presented. The Bayes factor is calculated from the marginal prior and posterior densities of the locations of the QTL under a linkage and a pleiotropy model. The procedure is computed with a Gibbs sampler, and it can be easily applied to any model including the location of the QTL as a variable. The procedure was compared with a multivariate least-squares method. The proposed procedure showed better results in terms of power of detection of linkage when low information is available. As information increases, the performance of both procedures becomes similar. An example using data provided by an Iberian by Landrace pig intercross is presented. The results showed that three different QTL segregate in SSC6: a pleiotropic QTL affects myristic, palmitic, and eicosadienoic fatty acids; another pleiotropic QTL affects palmitoleic, stearic, and vaccenic fatty acids; and a third QTL affects the percentage of linoleic acid. In the example, the Bayes factor approach was more powerful than the multivariate least-squares approach. PMID:15020485

  11. Safety and efficacy of BAY 94-9027, a prolonged-half-life factor VIII.

    PubMed

    Reding, M T; Ng, H J; Poulsen, L H; Eyster, M E; Pabinger, I; Shin, H-J; Walsch, R; Lederman, M; Wang, M; Hardtke, M; Michaels, L A

    2017-03-01

    Essentials Recombinant factor VIII BAY 94-9027 conjugates in a site-specific manner with polyethylene glycol. BAY 94-9027 was given to patients with severe hemophilia A as prophylaxis and to treat bleeds. BAY 94-9027 prevented bleeds at dose intervals up to every 7 days and effectively treated bleeds. BAY 94-9027 treatment was mainly well tolerated and no patient developed factor VIII inhibitors. Click to hear Dr Tiede's perspective on half-life extended factor VIII for the treatment of hemophilia A SUMMARY: Background BAY 94-9027 is a B-domain-deleted prolonged-half-life recombinant factor VIII (FVIII) that conjugates in a site-specific manner with polyethylene glycol. Objective Assess efficacy and safety of BAY 94-9027 for prophylaxis and treatment of bleeds in patients with severe hemophilia A. Patients/methods In this multinational, phase 2/3, partially randomized, open-label trial, men aged 12-65 years with FVIII < 1% and ≥ 150 exposure days to FVIII received BAY 94-9027 for 36 weeks on demand or prophylactically at intervals determined following a 10-week run-in period on 25 IU kg(-1) body weight two times per week. Patients with > 1 bleed during the run-in subsequently received 30-40 IU kg(-1) two times per week; patients with ≤ 1 bleed were eligible for randomization to every-5-days (45-60 IU kg(-1) ) or every-7-days (60 IU kg(-1) ) prophylaxis (1 : 1) for 26 additional weeks until randomization arms were filled. Patients who were eligible but not randomized continued twice-weekly prophylaxis. The primary efficacy outcome was annualized bleeding rate (ABR). Results The intent-to-treat population included 132 patients (prophylaxis, n = 112; on demand, n = 20). Median ABR (quartile [Q1; Q3]) for patients treated two times per week who were not eligible for randomization (n = 13) improved after dose increase (17.4 [14.3; 26.0] to 4.1 [2.0; 10.6]). Median ABR for patients randomized to every-5-days treatment (n = 43) was 1.9 (0; 4.2), similar to patients

  12. A Test by Any Other Name: P Values, Bayes Factors, and Statistical Inference.

    PubMed

    Stern, Hal S

    2016-01-01

    Procedures used for statistical inference are receiving increased scrutiny as the scientific community studies the factors associated with insuring reproducible research. This note addresses recent negative attention directed at p values, the relationship of confidence intervals and tests, and the role of Bayesian inference and Bayes factors, with an eye toward better understanding these different strategies for statistical inference. We argue that researchers and data analysts too often resort to binary decisions (e.g., whether to reject or accept the null hypothesis) in settings where this may not be required.

  13. Factors affecting herbicide yields in the Chesapeake Bay watershed, June 1994

    USGS Publications Warehouse

    Hainly, R.A.; Kahn, J.M.

    1996-01-01

    Median concentrations and instantaneous yields of alachlor, metolachlor, atrazine, cyanazine, and simazine were generally highest at sites in the Lower Susquehanna River Basin and in agricultural subbasins. Instantaneous herbicide yields are related to land use, hydrogeologic setting, streamflow yield, and agricultural row cropping practices. The significance of these relations may be affected by the interdependence of the factors. The percentage of basin area planted in corn is the most influential factor in the prediction of herbicide yield. Instantaneous yields of all five herbicides measured in June 1994 related poorly to averaged 199094 herbicide use. Annually averaged herbicide-use data are too general to use as a predictor for short-term herbicide yields. An evaluation of factors affecting herbicide yields could be refined with more-current land use and land cover information and a more accurate estimate of the percentage of basin area planted in corn. Factors related to herbicide yields can be used to predict herbicide yields in other basins within the Chesapeake Bay watershed and to develop an estimate of herbicide loads to Chesapeake Bay.Median concentrations and instantaneous yields of alachlor, metolachlor, atrazine, cyanazine, and simazine were generally highest at sites in the Lower Susquehanna River Basin and in agricultural subbasins. Instantaneous herbicide yields are related to land use, hydrogeologic setting, streamflow yield, and agricultural row cropping practices. The significance of these relations may be affected by the interdependence of the factors. The percentage of basin area planted in corn is the most influential factor in the prediction of herbicide yield. Instantaneous yields of all five herbicides measured in June 1994 related poorly to averaged 1990-94 herbicide use. Annually averaged herbicide-use data are too general to use as a predictor for short-term herbicide yields. An evaluation of factors affecting herbicide yields could

  14. Factors affecting nutrient trends in major rivers of the Chesapeake Bay Watershed

    USGS Publications Warehouse

    Sprague, Lori A.; Langland, M.J.; Yochum, S.E.; Edwards, R.E.; Blomquist, J.D.; Phillips, S.W.; Shenk, G.W.; Preston, S.D.

    2000-01-01

    Trends in nutrient loads and flow-adjusted concentrations in the major rivers entering Chesapeake Bay were computed on the basis of water-quality data collected between 1985 and 1998 at 29 monitoring stations in the Susquehanna, Potomac, James, Rappahannock, York, Patuxent, and Choptank River Basins. Two computer models?the Chesapeake Bay Watershed Model (WSM) and the U.S. Geological Survey?s 'Spatially Referenced Regressions on Watershed attributes' (SPARROW) Model?were used to help explain the major factors affecting the trends. Results from WSM simulations provided information on temporal changes in contributions from major nutrient sources, and results from SPARROW model simulations provided spatial detail on the distribution of nutrient yields in these basins. Additional data on nutrient sources, basin characteristics, implementation of management practices, and ground-water inputs to surface water were analyzed to help explain the trends. The major factors affecting the trends were changes in nutrient sources and natural variations in streamflow. The dominant source of nitrogen and phosphorus from 1985 to 1998 in six of the seven tributary basins to Chesapeake Bay was determined to be agriculture. Because of the predominance of agricultural inputs, changes in agricultural nutrient sources such as manure and fertilizer, combined with decreases in agricultural acreage and implementation of best management practices (BMPs), had the greatest impact on the trends in flow-adjusted nutrient concentrations. Urban acreage and population, however, were noted to be increasing throughout the Chesapeake Bay Watershed, and as a result, delivered loads of nutrients from urban areas increased during the study period. Overall, agricultural nutrient management, in combination with load decreases from point sources due to facility upgrades and the phosphate detergent ban, led to downward trends in flow-adjusted nutrient concentrations atmany of the monitoring stations in the

  15. Using multiple sulfur isotopes to link biological isotope fractionation in a sedimentary protolith to a magmatic Ni-sulfide deposit: Voisey's Bay Ni deposit, Labrador, Canada

    NASA Astrophysics Data System (ADS)

    Hiebert, R. S.; Bekker, A.; Wing, B. A.

    2012-12-01

    It is generally accepted that crustal contamination is required for the formation of significant magmatic Ni-Cu-PGE sulfide deposits. Either the addition of external S or SiO2 promote early sulfide saturation. The most direct indicator of S addition by this contaminant is S isotopes. However, the traditional use of δ34S values is inadequate in deposits where Archean sedimentary sulfides incorporated into these deposits might not have significantly different δ34S values from those of mantle S. Even in sediments that have variable δ34S values, δ34S signature can be reset to magmatic values by equilibrating large amounts of silicate magma with initial sulfide melt. However, sedimentary rocks contain isotope evidence of biological fractionation processes in the relationship between δ33S and δ34S values. We used multiple S isotope data to constrain the relationship between δ33S and δ34S values, identify biological S isotope fractionation in the metamorphosed sedimentary rocks of the Tasiuyak Gneiss, and compare this relationship to that in the Voisey's Bay magmatic Ni-deposit. The Voisey's Bay Ni-sulfide deposit, Labrador is hosted by a troctolitic conduit system. The Voisey's Bay intrusion is a part of the Nain plutonic suite and intruded at approximately 1.3 Ga along the boundary between the Proterozoic Tasiuyak Gneiss of the Churchill province and Archean gneisses of the Nain province. The general model suggests assimilation of a large amount of sulfidic Tasiuyak gneiss, leading to sulfur saturation prior to emplacement, even though the Tasiuyak gneiss does not have a high concentration of sulfur. High-temperature equilibrium relationships are not present in our measured δ33S and δ34S values from the Voisey's Bay deposit. Instead they indicate that a kinetic process is responsible for S isotope fractionations in the mineralization and troctolite, similar to that recorded by the Tasiuyak gneiss. The observed relationship between δ33S and δ34S values is

  16. [Zooplankton community structure in relation to influencing factors in different parts of Hangzhou Bay in autumn].

    PubMed

    Zhang, Dong-rong; Xu, Zhao-li; Xu, Jia-yi; Chen, Jia-jie

    2015-09-01

    Based on the data collected from three oceanographic surveys in the east area of north (30.68°-30.83° N,121.67°-121.87° E), the east area of south (29.95°-30.24° N,121.60°- 121.85° E), and the west area of north (30.58°--30.77° N,121.31°--121.56° E) Hangzhou Bay during the autumn of 2009, 2011 and 2012, we analyzed the species composition, ecological groups and the similarity of zooplankton community, as well as influencing factors. The results indicated that a total of 14 species belonging to 6 groups were identified in the west area of north Hangzhou Bay. Tortanus vermiculus was the predominant species. The zooplankton assembles were mainly influenced by the runoff strength of the Qiantang River. The zooplankton fauna was mainly composed of the subtropical estuarine brackish-water species, accounting for 79.8% in the total abundance. A total of 19 species belonging to 6 groups were identified in the east area of north Hangzhou Bay. The composition of zooplankton community was mainly influenced by the Changjiang diluted water and offshore water of the East China Sea. It was mainly composed of warm-temperature and subtropical nearshore low-salinity species, accounting for 43.5% and 31.1% in the total abundance, respectively. In the east area of south Hangzhou Bay, a total of 25 species belonging to 7 groups were identified. The composition of zooplankton community was mainly influenced by the offshore water of the East China Sea. The dominate eco-group types were subtropical nearshore low-salinity and subtropical nearshore species, accounting for 72.3% and 18.3% in the total abundance, respectively. And the ecological groups of species with the highest abundance was Labidocera sinilobata, accounting for 65.3% in the total abundance. By hierarchical cluster analysis and non-metric multidimensional scaling (NMDS) method, it was found that the zooplankton communities in the three parts of Hangzhou Bay were significantly different, which were closely

  17. Humboldt Bay Vertical Reference System Working Group: unraveling tectonic and eustatic factors of sea level rise in northern California, Humboldt Bay

    NASA Astrophysics Data System (ADS)

    Williams, T. B.; Anderson, J. K.; Burgette, R. J.; Gilkerson, W.; Hemphill-Haley, M.; Leroy, T. H.; Patton, J. R.; Southwick, E.; Stallman, J.; Weldon, R. J.

    2012-12-01

    Sea-level rise is a critical factor in managing estuarine ecosystems, maintaining public infrastructure, and mitigating geologic hazards along north coastal California. The coastal region between Fort Bragg, California and Vancouver Island experiences ongoing land-level changes due to Cascadia subduction zone tectonics. These tectonic land-level changes sufficiently modify relative sea level such that sea-level rise cannot be accurately estimated without determining the tectonic contribution. We use tide gages and precise level-loop surveys to observe modern land and water surface elevations around Humboldt Bay. These modern data, combined with historic survey data, will be used to deconfound the various factors contributing to relative sea level change. Independent analysis of existing NOAA tide gages and EarthScope CGPS stations indicate 2.5 mm/yr of land subsidence near Humboldt Bay and 2 mm/yr of land uplift in Crescent City. Presuming the bulk of the strain accumulation is due to the southern portion of the Cascadia subduction zone, these data suggest Humboldt Bay is west of the locked zone, not to the east as previously reported by several researchers.

  18. Jamaica Bay studies VII: Factors affecting the distribution and abundance of ducks in a New York estuary

    NASA Astrophysics Data System (ADS)

    Burger, Joanna; Trout, J. Richard; Wander, Wade; Ritter, Glenn S.

    1984-12-01

    The abundance and distribution of ducks (Anatini, Cairinini, Aythyini, Mergini, Oxyurini) were examined at Jamaica Bay Wildlife Refuge, a coastal estuary on Long Island, New York. The refuge contains a variety of tidal habitats as well two freshwater impoundments. The largest concentrations of diving ducks were present in March and April, and from October through December; while the largest concentrations of dabbling ducks were present from June through December. Thus, diving ducks used the refuge on migration whereas dabbling ducks used the refuge during and following the breeding season. Time of year was thus the most significant factor affecting distribution and abundance. Some species were present all year, including Black Duck Anas rubripes, Mallard A. platyrhynchos, Gadwall A. strepera, and Ruddy Duck Oxyura jamaicensis. Although both dabblers and divers used all areas of the bay, dabblers used both ponds while divers used only the East Pond. Dabbling ducks concentrated in the bay at low tide, and on the ponds at high tide. There were more divers on the bay on a falling tide although tide direction did not influence the abundance or distribution of dabblers. Temperature and wind variables influenced the distribution of all ducks: they used the bay at low temperatures, and rafted in large flocks on the bay in intermediate, Northwest winds. Only the numbers and distribution of dabblers were significantly influenced by cloud cover. We conclude that abiotic factors influence the abundance and distribution of ducks on Jamaica Bay Wildlife Refuge, and that tidal factors should be considered when managing migratory or wintering populations of ducks.

  19. Picoplankton Bloom in Global South? A High Fraction of Aerobic Anoxygenic Phototrophic Bacteria in Metagenomes from a Coastal Bay (Arraial do Cabo—Brazil)

    PubMed Central

    Cuadrat, Rafael R. C.; Ferrera, Isabel; Grossart, Hans-Peter; Dávila, Alberto M. R.

    2016-01-01

    Abstract Marine habitats harbor a great diversity of microorganism from the three domains of life, only a small fraction of which can be cultivated. Metagenomic approaches are increasingly popular for addressing microbial diversity without culture, serving as sensitive and relatively unbiased methods for identifying and cataloging the diversity of nucleic acid sequences derived from organisms in environmental samples. Aerobic anoxygenic phototrophic bacteria (AAP) play important roles in carbon and energy cycling in aquatic systems. In oceans, those bacteria are widely distributed; however, their abundance and importance are still poorly understood. The aim of this study was to estimate abundance and diversity of AAPs in metagenomes from an upwelling affected coastal bay in Arraial do Cabo, Brazil, using in silico screening for the anoxygenic photosynthesis core genes. Metagenomes from the Global Ocean Sample Expedition (GOS) were screened for comparative purposes. AAPs were highly abundant in the free-living bacterial fraction from Arraial do Cabo: 23.88% of total bacterial cells, compared with 15% in the GOS dataset. Of the ten most AAP abundant samples from GOS, eight were collected close to the Equator where solar irradiation is high year-round. We were able to assign most retrieved sequences to phylo-groups, with a particularly high abundance of Roseobacter in Arraial do Cabo samples. The high abundance of AAP in this tropical bay may be related to the upwelling phenomenon and subsequent picoplankton bloom. These results suggest a link between upwelling and light abundance and demonstrate AAP even in oligotrophic tropical and subtropical environments. Longitudinal studies in the Arraial do Cabo region are warranted to understand the dynamics of AAP at different locations and seasons, and the ecological role of these unique bacteria for biogeochemical and energy cycling in the ocean. PMID:26871866

  20. Theoretical evaluation of isotopic fractionation factors in oxidation reactions of benzene, phenol and chlorophenols.

    PubMed

    Adamczyk, Paweł; Paneth, Piotr

    2011-09-01

    We have studied theoretically the rate determining steps of reactions of benzene with permanganate, perchlorate, ozone and dioxygen in the gas phase and aqueous solution as well as phenol and dichlorophenol in protonated and unprotonated forms in aqueous solution. Kinetic isotope effects were then calculated for all carbon atoms and based on their values isotopic fractionation factors corresponding to compound specific isotopic analysis have been evaluated. The influence of the oxidant, substituents, environment and protonation on the isotopic fractionation factors has been analyzed.

  1. Monitoring of DSP toxins in small-sized plankton fraction of seawater collected in Mutsu Bay, Japan, by ELISA method: relation with toxin contamination of scallop.

    PubMed

    Imai, Ichiro; Sugioka, Hikaru; Nishitani, Goh; Mitsuya, Tadashi; Hamano, Yonekazu

    2003-01-01

    Monitorings were conducted on DSP toxins in mid-gut gland of scallop (mouse assay), cell numbers of toxic dinoflagellate species of Dinophysis, and diarrhetic shellfish poisoning (DSP) toxins in small-sized (0.7-5 microm) plankton fraction of seawater collected from surface (0 m) and 20 m depth at a station in Mutsu Bay, Aomori Prefecture, Japan, in 2000. A specific enzyme-linked immunosorbent assay (ELISA) was employed for the analysis of DSP toxins in small-sized plankton fraction using a mouse monoclonal anti-okadaic acid antibody which recognizes okadaic acid, dinophysistoxin-1, and dinophysistoxin-3. DSP toxins were detected twice in the mid-gut gland of scallops at 1.1-2.3 MU (mouse units) g(-1) on 26 June and at 0.6-1.2 MU g(-1) on 3 July, respectively. Relatively high cell densities of D. fortii were observed on 26 June and 11 September, and may only contribute to the bivalve toxicity during late June to early July. D. acuminata did not appear to be responsible for the toxicity of scallops in Mutsu Bay in 2000. ELISA monitoring of small-sized plankton fraction in seawater could detect DSP toxins two weeks before the detection of the toxin in scallops, and could do so two weeks after the loss of the bivalve toxicity by mouse assay. On 17 July, toxic D. fortii was detected at only small number, <10 cells l(-1), but DSP toxins were detected by the ELISA assay, suggesting a presence of other toxic small-sized plankton in seawater. For the purpose of reducing negative impacts of DSP occurrences, monitorings have been carried out hitherto on DSP toxins of bivalve tissues by mouse assay and on cell densities of "toxic" species of Dinophysis. Here we propose a usefulness of ELISA monitoring of plankton toxicity, especially in small-sized fraction, which are possible foods of mixotrophic Dinophysis, as a practical tool for detecting and predicting DSPs in coastal areas of fisheries grounds of bivalve aquaculture.

  2. Mink biomagnification factors for dioxin-like compounds fed Saginaw Bay carp

    SciTech Connect

    Kubiak, T.J.; Tillitt, D.E.; Heaton, S.N.; Bursian, S.N.; Giesy, J.P.; Render, J.A.; Aulerich, R.J.

    1994-12-31

    Diets containing 0, 10, 20 and 40% Saginaw Bay carp were fed to ranch mink to assess reproductive effects. All carp diets adversely affected reproduction. The diets and livers of the adult mink at the end of the study were chemically analyzed for planar halogenated hydrocarbons (PHHS) that induce aryl hydrocarbon hydroxylase (AHH)/ethoxyresorufin o-deethylase (EROD). Biomagnification factors (BMFS) from diets to mink livers were calculated. AHH and EROD-active PCB congeners uniformly magnified across diets except for PCB 126, which had higher magnification at lowest carp and control diets. PCB and PCDF congener magnification ranged from incalculable to 60-fold higher and individual PCDDs ranged from incalculable to 165 times the diet. As expected from previous mammalian studies, 2378-TCDD magnified over an order of magnitude more than 2378-TCDF but by 4 to 5-fold less than 23478-PCDF. Based on dioxin equivalents theory and TEFS, PCB 126 ranked first in the liver residues of 2378-TCDD equivalents followed by PCB 105, 23478-PCDF and 2378-TCDD. Magnification factors allow for interpretation of relative exposure risks from certain wild forage species if wild mink liver concentrations are known. Conversely, knowledge of wild mink forage item concentrations allows for calculation of an estimated wild mink liver residue, when the concentration and dietary forage percentage are multiplied by the BMF. Therefore, BMFs can assist in the elucidation of relative risk of a population to these contaminants without necessarily having large numbers of mink samples, especially in habitats such as the Saginaw Bay area where mink and otter populations are presumed to be affected by high PHH contamination.

  3. A Bayes Factor Meta-Analysis of Recent Extrasensory Perception Experiments: Comment on Storm, Tressoldi, and Di Risio (2010)

    ERIC Educational Resources Information Center

    Rouder, Jeffrey N.; Morey, Richard D.; Province, Jordan M.

    2013-01-01

    Psi phenomena, such as mental telepathy, precognition, and clairvoyance, have garnered much recent attention. We reassess the evidence for psi effects from Storm, Tressoldi, and Di Risio's (2010) meta-analysis. Our analysis differs from Storm et al.'s in that we rely on Bayes factors, a Bayesian approach for stating the evidence from data for…

  4. An improved optimization algorithm and Bayes factor termination criterion for sequential projection pursuit

    SciTech Connect

    Webb-Robertson, Bobbie-Jo M.; Jarman, Kristin H.; Harvey, Scott D.; Posse, Christian; Wright, Bob W.

    2005-05-28

    A fundamental problem in analysis of highly multivariate spectral or chromatographic data is reduction of dimensionality. Principal components analysis (PCA), concerned with explaining the variance-covariance structure of the data, is a commonly used approach to dimension reduction. Recently an attractive alternative to PCA, sequential projection pursuit (SPP), has been introduced. Designed to elicit clustering tendencies in the data, SPP may be more appropriate when performing clustering or classification analysis. However, the existing genetic algorithm (GA) implementation of SPP has two shortcomings, computation time and inability to determine the number of factors necessary to explain the majority of the structure in the data. We address both these shortcomings. First, we introduce a new SPP algorithm, a random scan sampling algorithm (RSSA), that significantly reduces computation time. We compare the computational burden of the RSS and GA implementation for SPP on a dataset containing Raman spectra of twelve organic compounds. Second, we propose a Bayes factor criterion, BFC, as an effective measure for selecting the number of factors needed to explain the majority of the structure in the data. We compare SPP to PCA on two datasets varying in type, size, and difficulty; in both cases SPP achieves a higher accuracy with a lower number of latent variables.

  5. RNA sequencing supports distinct reactive oxygen species-mediated pathways of apoptosis by high and low size mass fractions of Bay leaf (Lauris nobilis) in HT-29 cells.

    PubMed

    Rodd, Annabelle L; Ververis, Katherine; Sayakkarage, Dheeshana; Khan, Abdul W; Rafehi, Haloom; Ziemann, Mark; Loveridge, Shanon J; Lazarus, Ross; Kerr, Caroline; Lockett, Trevor; El-Osta, Assam; Karagiannis, Tom C; Bennett, Louise E

    2015-08-01

    Anti-proliferative and pro-apoptotic effects of Bay leaf (Laurus nobilis) in mammalian cancer and HT-29 adenocarcinoma cells have been previously attributed to effects of polyphenolic and essential oil chemical species. Recently, we demonstrated differentiated growth-regulating effects of high (HFBL) versus low molecular mass (LFBL) aqueous fractions of bay leaf and now confirm by comparative effects on gene expression, that HFBL and LFBL suppress HT-29 growth by distinct mechanisms. Induction of intra-cellular lesions including DNA strand breakage by extra-cellular HFBL, invoked the hypothesis that iron-mediated reactive oxygen species with capacity to penetrate cell membrane, were responsible for HFBL-mediated effects, supported by equivalent effects of HFBL in combination with γ radiation. Activities of HFBL and LFBL were interpreted to reflect differentiated responses to iron-mediated reactive oxygen species (ROS), occurring either outside or inside cells. In the presence of LFBL, apoptotic death was relatively delayed compared with HFBL. ROS production by LFBL mediated p53-dependent apoptosis and recovery was suppressed by promoting G1/S phase arrest and failure of cellular tight junctions. In comparison, intra-cellular anti-oxidant protection exerted by LFBL was absent for extra-cellular HFBL (likely polysaccharide-rich), which potentiated more rapid apoptosis by producing DNA double strand breaks. Differentiated effects on expression of genes regulating ROS defense and chromatic condensation by LFBL versus HFBL, were observed. The results support ferrous iron in cell culture systems and potentially in vivo, can invoke different extra-cellular versus intra-cellular ROS-mediated chemistries, that may be regulated by exogenous, including dietary species.

  6. Carbon isotopic fractionation in macroalgae from Cádiz Bay (Southern Spain): Comparison with other bio-geographic regions

    NASA Astrophysics Data System (ADS)

    Mercado, Jesús M.; de los Santos, Carmen B.; Lucas Pérez-Lloréns, J.; Vergara, Juan J.

    2009-11-01

    The 13C signature of forty-five macroalgal species from intertidal zones at Cádiz Bay was analysed in order to research the extension of diffusive vs. non-diffusive utilisation of dissolved inorganic carbon (DIC) and to perform a comparison with data published for other bio-geographic regions. The ∂ 13C values ranged from -6.8‰ to -33‰, although the span of variation was different depending on the taxa. Thus, ∂ 13C for Chlorophyta varied from -7‰ ( Codium adhaerens) to -29.6‰ ( Flabellia petiolata), while all the Phaeophyceae (excepting Padina pavonica with ∂ 13C higher than -10‰) had values between -10‰, and -20‰. The widest variation range was recorded in Rhodophyta, from values above -10‰ ( Liagora viscida) to values lower than -30‰ obtained in three species belonging to the subclass Rhodymeniophycidae. Accordingly, the mean ∂ 13C value calculated for red algae (-20.2‰) was significantly lower than that for brown (-15.9‰) and green algae (-15.6‰). Most of the analysed red algae were species inhabiting crevices and the low intertidal fringe which explains that, on average, the shaded-habitat species had a ∂ 13C value lower than those growing fully exposed to sun (i.e. in rockpools or at the upper intertidal zone). The comparison between the capacity for non-diffusive use of DIC (i.e. active or facilitated transport of HCO 3- and/or CO 2) and the ∂ 13C values reveals that values more negative than -30‰ indicate that photosynthesis is dependent on CO 2 diffusive entry, whereas values above this threshold would not indicate necessary the operation of a non-diffusive DIC transport mechanism. Furthermore, external carbonic anhydrase activity ( extCA) and ∂ 13C values were negatively correlated indicating that the higher the dependence of the photosynthesis on the CO 2 supplied from HCO 3- via extCA, the lower the ∂ 13C in the algal material. The comparison between the ∂ 13C values obtained for the analysed species and those

  7. Distribution and controlling factors of phytoplankton assemblages in a semi-enclosed bay during spring and summer.

    PubMed

    Peng, Shitao; Qin, Xuebo; Shi, Honghua; Zhou, Ran; Dai, Mingxin; Ding, Dewen

    2012-05-01

    The phytoplankton assemblages' patterns and their correlation to environmental factors were studied in Bohai Bay during spring and summer. Two zones, the northern (NWA) and southern (SWA) water area, were identified by cluster analysis based on their physical and chemical properties. Principal component analysis (PCA) showed that more phytoplankton species was found in the SWA with low nutrient concentration, while high phytoplankton abundance occurred in the NWA with high nutrient concentration. The seasonal variability in phytoplankton can be explained by water temperature, nutrient, and hydrodynamic conditions (includes mixing during spring and stratification during summer). Results of redundancy analysis (RDA) showed that silicate (SiO(4)) and soluble reactive phosphorus (SRP) were the most important environmental factors influencing the phytoplankton distribution during spring and summer, respectively. Hydrodynamics condition plays a key role in controlling variation of the environmental factors, which determined phytoplankton distribution in Bohai Bay.

  8. Amelioration of oxygen and glucose deprivation-induced neuronal death by chloroform fraction of bay leaves (Laurus nobilis).

    PubMed

    Cho, Eun-Young; Lee, Sung-Jin; Nam, Kung-Woo; Shin, Jongheon; Oh, Ki-bong; Kim, Kyeong Ho; Mar, Woongchon

    2010-01-01

    The purpose of this study was to determine whether the Laurus nobilis chloroform fraction (LNCF) protects against cerebral ischemia neuronal damage. Human neuroblastoma SH-SY5Y cells and brain slices from rats were subjected to oxygen and glucose deprivation (OGD), followed by reoxgenation with and without LNCF. The viabilities of SH-SY5Y cells and brain slices from the rats were 58.5±4.9% and 79.7±5.9% in the group subjected to OGD, and 80.4±0.4% and 97.2±1.9% at 4 µg/ml of LNCF, respectively. LNCF also significantly inhibited death-associated protein kinase (DAPK) dephosphorylation. Pretreatment with LNCF at 4 mg/kg significantly decreased infarct size by 79% of vehicle control in the middle cerebral artery occlusion (MCAO) in vivo model. LNCF is a neuroprotective drug candidate against cerebral ischemia neuronal damage.

  9. Improving stable carbon and oxygen isotope geochemical measurements in dolomite: reference material and acid fractionation factor

    NASA Astrophysics Data System (ADS)

    Vandeginste, V.; John, C. M.; Jourdan, A.; Davis, S.

    2010-12-01

    The analysis of stable carbon and oxygen isotope composition is one of the most commonly used techniques in stratigraphic and diagenetic research of carbonate rocks. The wide-spread use and easy access of this long-established method has the side effect that little attention is paid to fundamental calibrations. Dolomite is often measured against a calcite standard (NBS19), and the acid fractionation factor used to calibrate is based on the one for calcite. To date, no reference material exists for dolomite. In this study, which is part of dolomite research in the Qatar Carbonates and Carbon Storage Research Centre project, we focus on two main goals. First, we characterize a current standard of dolomite used for major and minor elemental geochemistry, and assess its suitability as a new dolomite standard for δ18O and δ13C. Second, we attempt to better constrain the acid fractionation factor for dolomite and assess the influence of different dolomite types on this fractionation factor. As only two third of the total oxygen in the carbonate is released in the form of CO2 during acid reaction, a fractionation between the reacting carbonate and the resulting gas will occur. A recent study by Kim et al. (2007) improved on the acid fractionation factors for calcite and aragonite. Often, the acid fractionation factor for dolomite is used to calculate δ18O and δ13C from the values obtained by calibration with the calcite standard. Only two studies (from the 1980’s) have attempted to constrain the acid fractionation factor for dolomite, of which only Rosenbaum and Sheppard (1986) did experiments not only at 25°C, but also at 50 and 100°C. The dataset of the latter authors is, however, very limited and contains only two dolomite samples. We aim at improving the constraints on the acid fractionation factor of dolomite by reacting a wide range of different types of dolomite at a wide range of acid temperature, and compare this to the absolute isotopic composition of

  10. Factors affecting the recruitment of Amphibalanus improvisus and Dreissena polymorpha in a highly eutrophic brackish bay

    NASA Astrophysics Data System (ADS)

    Oganjan, Katarina; Lauringson, Velda; Kotta, Jonne; Rostin, Liis; Martin, Georg

    2017-01-01

    Species invasions are modifying ecosystems worldwide. Coexistence of invasive species of no common evolutionary history in their new ranges enables the study of ecological rules shaping novel communities at their initial stages. In oligohaline parts of the Baltic Sea, the most dominant and widespread epifaunal suspension feeders are invasive mussels Dreissena polymorpha and cirripeds Amphibalanus improvisus. This study experimentally evaluated recruitment and microhabitat use in response to environmental forcing in these two species in a eutrophic bay. Recruitment was structured by different microhabitat exploitation patterns coupled with both individual and interactive effects of several environmental gradients. Despite functional similarity, the importance of environmental gradients differed between these species: mussel recruitment was best explained by temperature while barnacle recruitment was best explained by wave exposure. Zebra mussels were more fastidious about surface orientation than barnacles. The preferred orientations also differed between species, as mussels strongly preferred horizontal surfaces, while barnacles were more abundant on vertical surfaces. Increase in one species also predicted well the abundance of the other, especially for barnacles, as mussel abundance was the best predictor of barnacle abundance over all the other factors. The extent of microhabitat segregation correlated weakly over the studied range of the most important environmental gradients. The study shows that coexistence of functionally similar non-native D. polymorpha and A. improvisus in their sympatric range is likely determined by complex interactions between these species, their different microhabitat exploitation patterns, environmental limitations and optima.

  11. Fish in shallow areas in Moreton Bay, Queensland and factors affecting their distribution

    NASA Astrophysics Data System (ADS)

    Weng, H. T.

    1990-06-01

    Five shallow areas (< 4 m in depth) in Moreton Bay were selected to examine fish communities. These areas can be categorized as sand-drifting, sea grass, river mouth, mangrove fringe and sewage outlet. A total of 86 fish species were recorded. Five species (6%) were regarded as true marine fish but these were of rare occurrence (0·5%). Four species (5%) were highly abundant (51%) and 57 species (66%) were represented by low numbers of fish (5%). The sewage outlet and the river mouth sites were found to contain the highest number of fish with relatively low numbers of species. The sand-drifting and the sea grass sites were different in fish fauna, and both were different from the remaining three sites which were of high similarity in fish faunal groups. Food availability, preference for habitats, sea grass vegetation, juvenile/adult segregation, season of juvenile recruitment and hydrological characteristics were thought to be important factors affecting the distribution of these species of fish.

  12. Bayes factor and posterior probability: Complementary statistical evidence to p-value.

    PubMed

    Lin, Ruitao; Yin, Guosheng

    2015-07-26

    As a convention, a p-value is often computed in hypothesis testing and compared with the nominal level of 0.05 to determine whether to reject the null hypothesis. Although the smaller the p-value, the more significant the statistical test, it is difficult to perceive the p-value in a probability scale and quantify it as the strength of the data against the null hypothesis. In contrast, the Bayesian posterior probability of the null hypothesis has an explicit interpretation of how strong the data support the null. We make a comparison of the p-value and the posterior probability by considering a recent clinical trial. The results show that even when we reject the null hypothesis, there is still a substantial probability (around 20%) that the null is true. Not only should we examine whether the data would have rarely occurred under the null hypothesis, but we also need to know whether the data would be rare under the alternative. As a result, the p-value only provides one side of the information, for which the Bayes factor and posterior probability may offer complementary evidence.

  13. Computing the Partial Fraction Decomposition of Rational Functions with Irreducible Quadratic Factors in the Denominators

    ERIC Educational Resources Information Center

    Man, Yiu-Kwong

    2012-01-01

    In this note, a new method for computing the partial fraction decomposition of rational functions with irreducible quadratic factors in the denominators is presented. This method involves polynomial divisions and substitutions only, without having to solve for the complex roots of the irreducible quadratic polynomial or to solve a system of linear…

  14. Review of factors affecting the distribution and abundance of waterfowl in shallow-water habitats of Chesapeake Bay

    USGS Publications Warehouse

    Perry, M.C.; Deller, A.S.

    1996-01-01

    Long-term trends of waterfowl populations in Chesapeake Bay demonstrate the importance of shallow-water habitats for waterfowl species. Although recent increases in field feeding by geese and swans lessened the importance of shallow-water areas for these species, most duck species depend almost exclusively on shallow-water habitats. Many factors influenced the distribution and abundance of waterfowl in shallow-water habitats. Habitat degradation resulted in the decline in numbers of most duck species and a change in distribution of some species. Increased numbers of mallards (Anas platyrhynchos) in recent decades probably resulted from release programs conducted by the Maryland Department of Natural Resources and private individuals. Studies of food habits since 1885 showed a decline in submerged-aquatic vegetation in the diet of some species, such as the canvasback (Aythya valisineria ), and an increase in the proportions of invertebrates in the diet. Diversity of food organisms for many waterfowl species has declined. Surveys of vegetation and invertebrates in the Chesapeake Bay generally reflect a degradation of shallow-water habitat. Human population increases in the Chesapeake Bay watershed directly and indirectly affected waterfowl distribution and abundance. The increase of exotic plant and invertebrate species in the bay, in most cases, benefited waterfowl populations. Increased contaminants have reduced the quality and quantity of habitat, although serious attempts to reverse this trend are underway. The use of shallow-water habitats by humans for fishing, hunting, boating, and other recreational and commercial uses reduced the use of shallow-water habitats by waterfowl. Humans can lessen the adverse influences on the valuable shallow-water habitats by restricting human population growth near these habitats and improving the water quality of the bay tributaries. Other affirmative actions that will improve these areas for waterfowl include greater

  15. Structuring factors and recent changes in subtidal macrozoobenthic communities of a coastal lagoon, Arcachon Bay (France)

    NASA Astrophysics Data System (ADS)

    Blanchet, Hugues; de Montaudouin, Xavier; Chardy, Pierre; Bachelet, Guy

    2005-09-01

    Fourteen years after a previous investigation in Arcachon Bay (SW France), the quantitative distribution of subtidal macrozoobenthic communities was assessed in 2002 through a stratified sampling strategy involving a larger number of stations (89 vs. 18) than in 1988. A total of 226 taxa were recorded. Cluster Analysis and Correspondence Analysis identified nine station groups corresponding to benthic faunal assemblages and their characteristic species. Multiple Discriminant Analysis showed that the main environmental factors influencing the distribution of faunal assemblages were sediment parameters and distance from the ocean. Depth was a minor structuring factor. At the scale of the lagoon, biogenic structures such as Zostera marina beds, Crepidula fornicata-dominated bottoms or dead oyster shell bottoms did not display any particular assemblage of infauna. Comparison with previous quantitative data from the 1988 survey provided more precision on the distribution of benthic assemblages and revealed community changes at a 14-year scale. These modifications reflected a general increase of silt and clay content in the sediment in the internal parts of channels, inducing community change. These changes can be correlated to the recent first signs of a moderate eutrophication process which have appeared, since 1988, through the development of green macroalgae in some parts of the lagoon. This trend was enhanced in transverse channels with reduced hydrodynamics and led to muddy areas where green macroalgae tended to accumulate. Locally, the dredging of sandbanks induced stronger currents and allowed the marine influence to occur, and also induced community change. These observations confirm that surveys of macrobenthic communities are useful tools to assess coastal ecosystem change even in moderately disturbed environments.

  16. Cr isotope fractionation factors for Cr(VI) reduction by a metabolically diverse group of bacteria

    NASA Astrophysics Data System (ADS)

    Basu, Anirban; Johnson, Thomas M.; Sanford, Robert A.

    2014-10-01

    Reduction of Cr(VI) is an important process that determines the geochemical behavior, mobility and bioavailability of Cr in both terrestrial and marine environments. Many metabolically diverse microorganisms possess Cr(VI) reduction capacity. Cr(VI) reduction fractionates Cr isotopes and thus 53Cr/52Cr ratios can be used to monitor Cr(VI) reduction and redox conditions. The magnitude of isotopic fractionation (ε) for a variety of microbial reduction mechanisms must be known for accurate interpretation of observed shifts in 53Cr/52Cr ratios. We determined isotopic fractionation factors for Cr(VI) reduction by metal reducers Geobacter sulfurreducens and Shewanella sp. strain NR, a denitrifying soil bacterium Pseudomonas stutzeri DCP-Ps1, and a sulfate reducer Desulfovibrio vulgaris. All bacteria investigated in this study produced significant Cr isotope fractionation. The fractionation (ε) for G. sulfurreducens, Shewanella sp. (NR), P. stutzeri DCP-Ps1, and D. vulgaris were -3.03‰ ± 0.12‰, -2.17‰ ± 0.22‰, -3.14‰ ± 0.13‰, and -3.01‰ ± 0.11‰, respectively. Despite differences in microbial strains in this study, the ε did not vary significantly except for Shewanella sp. (NR). Our results suggest that strong isotopic fractionation is induced during Cr(VI) reduction under electron donor poor (∼300 μM) conditions.

  17. Effects of environmental and biotic factors on carbon isotopic fractionation during decomposition of soil organic matter.

    PubMed

    Wang, Guoan; Jia, Yufu; Li, Wei

    2015-06-09

    Decomposition of soil organic matter (SOM) plays an important role in the global carbon cycle because the CO2 emitted from soil respiration is an important source of atmospheric CO2. Carbon isotopic fractionation occurs during SOM decomposition, which leads to (12)C to enrich in the released CO2 while (13)C to enrich in the residual SOM. Understanding the isotope fractionation has been demonstrated to be helpful for studying the global carbon cycle. Soil and litter samples were collected from soil profiles at 27 different sites located along a vertical transect from 1200 to 4500 m above sea level (a.s.l.) in the south-eastern side of the Tibetan Plateau. Their carbon isotope ratios, C and N concentrations were measured. In addition, fiber and lignin in litter samples were also analyzed. Carbon isotope fractionation factor (α) during SOM decomposition was estimated indirectly as the slope of the relationship between carbon isotope ratios of SOM and soil C concentrations. This study shows that litter quality and soil water play a significant role in isotope fractionation during SOM decomposition, and the carbon isotope fractionation factor, α, increases with litter quality and soil water content. However, we found that temperature had no significant impact on the α variance.

  18. Effects of environmental and biotic factors on carbon isotopic fractionation during decomposition of soil organic matter

    PubMed Central

    Wang, Guoan; Jia, Yufu; Li, Wei

    2015-01-01

    Decomposition of soil organic matter (SOM) plays an important role in the global carbon cycle because the CO2 emitted from soil respiration is an important source of atmospheric CO2. Carbon isotopic fractionation occurs during SOM decomposition, which leads to 12C to enrich in the released CO2 while 13C to enrich in the residual SOM. Understanding the isotope fractionation has been demonstrated to be helpful for studying the global carbon cycle. Soil and litter samples were collected from soil profiles at 27 different sites located along a vertical transect from 1200 to 4500 m above sea level (a.s.l.) in the south-eastern side of the Tibetan Plateau. Their carbon isotope ratios, C and N concentrations were measured. In addition, fiber and lignin in litter samples were also analyzed. Carbon isotope fractionation factor (α) during SOM decomposition was estimated indirectly as the slope of the relationship between carbon isotope ratios of SOM and soil C concentrations. This study shows that litter quality and soil water play a significant role in isotope fractionation during SOM decomposition, and the carbon isotope fractionation factor, α, increases with litter quality and soil water content. However, we found that temperature had no significant impact on the α variance. PMID:26056012

  19. Effects of environmental and biotic factors on carbon isotopic fractionation during decomposition of soil organic matter

    NASA Astrophysics Data System (ADS)

    Wang, Guoan; Jia, Yufu; Li, Wei

    2015-06-01

    Decomposition of soil organic matter (SOM) plays an important role in the global carbon cycle because the CO2 emitted from soil respiration is an important source of atmospheric CO2. Carbon isotopic fractionation occurs during SOM decomposition, which leads to 12C to enrich in the released CO2 while 13C to enrich in the residual SOM. Understanding the isotope fractionation has been demonstrated to be helpful for studying the global carbon cycle. Soil and litter samples were collected from soil profiles at 27 different sites located along a vertical transect from 1200 to 4500 m above sea level (a.s.l.) in the south-eastern side of the Tibetan Plateau. Their carbon isotope ratios, C and N concentrations were measured. In addition, fiber and lignin in litter samples were also analyzed. Carbon isotope fractionation factor (α) during SOM decomposition was estimated indirectly as the slope of the relationship between carbon isotope ratios of SOM and soil C concentrations. This study shows that litter quality and soil water play a significant role in isotope fractionation during SOM decomposition, and the carbon isotope fractionation factor, α, increases with litter quality and soil water content. However, we found that temperature had no significant impact on the α variance.

  20. Insulin-Like Growth Factor-1 Preserves Salivary Gland Function After Fractionated Radiation

    SciTech Connect

    Limesand, Kirsten H.; Avila, Jennifer L.; Victory, Kerton; Chang, Hui-Hua; Shin, Yoon Joo; Grundmann, Oliver; Klein, Rob R.

    2010-10-01

    Purpose: Radiotherapy for head-and-neck cancer consists of fractionated radiation treatments that cause significant damage to salivary glands leading to chronic salivary gland dysfunction with only limited prevention and treatment options currently available. This study examines the feasibility of IGF-1 in preserving salivary gland function following a fractionated radiation treatment regimen in a pre-clinical model. Methods and Materials: Mice were exposed to fractionated radiation, and salivary gland function and histological analyses of structure, apoptosis, and proliferation were evaluated. Results: In this study, we report that treatment with fractionated doses of radiation results in a significant level of apoptotic cells in FVB mice after each fraction, which is significantly decreased in transgenic mice expressing a constitutively active mutant of Akt1 (myr-Akt1). Salivary gland function is significantly reduced in FVB mice exposed to fractionated radiation; however, myr-Akt1 transgenic mice maintain salivary function under the same treatment conditions. Injection into FVB mice of recombinant insulin-like growth factor-1 (IGF-1), which activates endogenous Akt, suppressed acute apoptosis and preserved salivary gland function after fractionated doses of radiation 30 to 90 days after treatment. FVB mice exposed to fractionated radiation had significantly lower levels of proliferating cell nuclear antigen-positive salivary acinar cells 90 days after treatment, which correlated with a chronic loss of function. In contrast, FVB mice injected with IGF-1 before each radiation treatment exhibited acinar cell proliferation rates similar to those of untreated controls. Conclusion: These studies suggest that activation of IGF-1-mediated pathways before head-and-neck radiation could modulate radiation-induced salivary gland dysfunction and maintain glandular homeostasis.

  1. A new factor in the blood of patients with peptic ulcer. Distribution in blood fractions.

    PubMed

    Necheles, H; Geisel, A; Berg, M; Jefferson, N C

    1975-08-01

    Previous work on a factor in the blood of patients with peptic ulcer which contracts smooth muscle was confirmed and the work extended to investigation of the activity of blood fractions. Whole heparinized blood and its fractions were tested on a strip of guinea pig ileum and height of contraction and latent period were used as criteria of activity. Whole heparinized blood of ulcer patients had significantly higher activity than that of normal controls. Differences between the fractions of ulcer patients and controls were less significant. With the lysed buffy coat, however, while the differences between the height of contraction between the groups did not differ statistically, the speed of the reaction (shorter latent period) was significantly greater in the ulcer patients. The cellular alterations causing this response are unknown.

  2. Fractionation and reconstitution of factors required for accurate transcription of mammalian ribosomal RNA genes: identification of a species-dependent initiation factor.

    PubMed Central

    Mishima, Y; Financsek, I; Kominami, R; Muramatsu, M

    1982-01-01

    Mouse and human cell extracts (S100) can support an accurate and efficient transcription initiation on homologous ribosomal RNA gene (rDNA) templates. The cell extracts were fractionated with the aid of a phosphocellulose column into four fractions (termed A, B, C and D), including one containing a major part of the RNA polymerase I activity. Various reconstitution experiments indicate that fraction D is an absolute requirement for the correct and efficient transcription initiation by RNA polymerase I on both mouse and human genes. Fraction B effectively suppresses random initiation on these templates. Fraction A appears to further enhance the transcription which takes place with fractions C and D. Although fractions A, B and C are interchangeable between mouse and human extracts, fraction D is not; i.e. initiation of transcription required the presence of a homologous fraction D for both templates. The factor(s) in fraction D, however, is not literally species-specific, since mouse D fraction is capable of supporting accurate transcription initiation on a rat rDNA template in the presence of all the other fractions from human cell extract under the conditions where human D fraction is unable to support it. We conclude from these experiments that a species-dependent factor in fraction D plays an important role in the initiation of rDNA transcription in each animal species. Images PMID:7177852

  3. Spatial patterns of distribution and the influence of seasonal and abiotic factors on demersal ichthyofauna in an estuarine tropical bay.

    PubMed

    da Silva, D R; Paranhos, R; Vianna, M

    2016-07-01

    This study focused on the influence of local-scale environmental factors on key metrics of fish community structure and function at Guanabara Bay, an estuarine system that differs from all other south-western Atlantic estuaries due to the influence of an annual low-intensity upwelling event during late spring and summer, between November and March, when a warm rainy climate prevails. The spatial patterns of the bottom temperature and salinity were more heterogeneous during the rainy season than the dry season, being linked to total precipitation and seasonal oceanographic events. The study identified 130 species and 45 families, placing Guanabara Bay as one of the most species-rich tropical estuarine ecosystems, far exceeding 22 other Brazilian estuaries. These results, in addition to characteristics such as a relatively well-preserved mangrove forest, high productivity and favourable conditions for the growth and reproduction of estuarine species, indicate that Guanabara Bay plays a central role in supporting large populations of fishes, including commercially important species.

  4. Testing general relativity with compact coalescing binaries: comparing exact and predictive methods to compute the Bayes factor

    NASA Astrophysics Data System (ADS)

    Del Pozzo, Walter; Grover, Katherine; Mandel, Ilya; Vecchio, Alberto

    2014-10-01

    The second generation of gravitational-wave detectors is scheduled to start operations in 2015. Gravitational-wave signatures of compact binary coalescences could be used to accurately test the strong-field dynamical predictions of general relativity (GR). Computationally expensive data analysis pipelines, including TIGER (test infrastructure for general relativity), have been developed to carry out such tests. As a means to cheaply assess whether a particular deviation from GR can be detected, Cornish et al (2011 Phys. Rev. D 84 062003) and Vallisneri (2012 Phys. Rev. D 86 082001) recently proposed an approximate scheme to compute the Bayes factor between a GR gravitational-wave model and a model representing a class of alternative theories of gravity parametrized by one additional parameter. This approximate scheme is based on only two easy-to-compute quantities: the signal-to-noise ratio (SNR) of the signal and the fitting factor (FF) between the signal and the manifold of possible waveforms within GR. In this work, we compare the prediction from the approximate formula against an exact numerical calculation of the Bayes factor using the lalinference library. We find that, using frequency-domain waveforms, the approximate scheme predicts exact results with good accuracy, providing the correct scaling with the SNR at a FF value of 0.992 and the correct scaling with the FF at a SNR of 20, down to a FF of ˜ 0.9. We extend the framework for the approximate calculation of the Bayes factor, which significantly increases its range of validity, at least to FFs of ˜ 0.7 or higher.

  5. Chesapeake Bay study

    NASA Technical Reports Server (NTRS)

    Love, W. J.

    1972-01-01

    The objectives and scope of the Chesapeake Bay study are discussed. The physical, chemical, biological, political, and social phenomena of concern to the Chesapeake Bay area are included in the study. The construction of a model of the bay which will provide a means of accurately studying the interaction of the ecological factors is described. The application of the study by management organizations for development, enhancement, conservation, preservation, and restoration of the resources is examined.

  6. Mass spectrometric characterization of the hypoxia-inducible factor (HIF) stabilizer drug candidate BAY 85-3934 (molidustat) and its glucuronidated metabolite BAY-348, and their implementation into routine doping controls.

    PubMed

    Dib, Josef; Mongongu, Cynthia; Buisson, Corinne; Molina, Adeline; Schänzer, Wilhelm; Thuss, Uwe; Thevis, Mario

    2017-01-01

    The development of new therapeutics potentially exhibiting performance-enhancing properties implicates the risk of their misuse by athletes in amateur and elite sports. Such drugs necessitate preventive anti-doping research for consideration in sports drug testing programmes. Hypoxia-inducible factor (HIF) stabilizers represent an emerging class of therapeutics that allows for increasing erythropoiesis in patients. BAY 85-3934 is a novel HIF stabilizer, which is currently undergoing phase-2 clinical trials. Consequently, the comprehensive characterization of BAY 85-3934 and human urinary metabolites as well as the implementation of these analytes into routine doping controls is of great importance. The mass spectrometric behaviour of the HIF stabilizer drug candidate BAY 85-3934 and a glucuronidated metabolite (BAY-348) were characterized by electrospray ionization-(tandem) mass spectrometry (ESI-MS(/MS)) and multiple-stage mass spectrometry (MS(n) ). Subsequently, two different laboratories established different analytical approaches (one each) enabling urine sample analyses by employing either direct urine injection or solid-phase extraction. The methods were cross-validated for the metabolite BAY-348 that is expected to represent an appropriate target analyte for human urine analysis. Two test methods allowing for the detection of BAY-348 in human urine were applied and cross-validated concerning the validation parameters specificity, linearity, lower limit of detection (LLOD; 1-5 ng/mL), ion suppression/enhancement (up to 78%), intra- and inter-day precision (3-21%), recovery (29-48%), and carryover. By means of ten spiked test urine samples sent blinded to one of the participating laboratories, the fitness-for-purpose of both assays was provided as all specimens were correctly identified applying both testing methods. As no post-administration study samples were available, analyses of authentic urine specimens remain desirable. Copyright © 2016 John Wiley

  7. Population attributable fraction of modifiable risk factors for Alzheimer disease: A systematic review of systematic reviews

    PubMed Central

    Hazar, Narjes; Seddigh, Leila; Rampisheh, Zahra; Nojomi, Marzieh

    2016-01-01

    Background: Alzheimer’s disease (AD) is the most common type of dementia. Demonstrating the modifiable risk factors of AD can help to plan for prevention of this disease. The aim of the current review was to characterize modifiable cardiovascular risk factors of AD using existing data and determine their contribution in AD development in Iran and the world. Methods: The systematic search was done in Medline, Scopus, and Cochrane databases from inception to May 2014 to find systematic reviews or meta-analyses about association between AD and cardiovascular modifiable risk factors included diabetes, hypertension (HTN), physical inactivity, smoking, hypercholesterolemia, and overweight and obesity. The population attributable fraction (PAF) was calculated for these risk factors in Iran and the world. Results: Of 2651 articles, 11 were eligible for data extraction after assessing relevancy and quality. Diabetes mellitus (DM) type 2, smoking, physical inactivity, overweight and obesity were significantly associated with increased risk of AD. Physical inactivity with 22.0% and smoking with 15.7% had the highest PAF for AD in Iran and the world, respectively. Conclusion: Our findings demonstrated that modifiable cardiovascular risk factors could increase the risk of AD. Moreover, about one-third of AD cases were attributed to five modifiable risk factors. PMID:27648178

  8. Phase I study of BAY 94-9027, a PEGylated B-domain-deleted recombinant factor VIII with an extended half-life, in subjects with hemophilia A

    PubMed Central

    Coyle, T E; Reding, M T; Lin, J C; Michaels, L A; Shah, A; Powell, J

    2014-01-01

    Background BAY 94-9027 is a B-domain-deleted recombinant factor VIII (rFVIII) with site-specific attachment of poly(ethylene glycol) that has shown an extended half-life in animal models of hemophilia. Objectives To assess the pharmacokinetics and safety of BAY 94-9027 after single and repeated administration in subjects with severe hemophilia A. Patients/Methods This 8-week, prospective, multicenter, open-label, phase I trial was conducted in 14 subjects aged 21–58 years with FVIII of < 1%, ≥ 150 days of exposure to FVIII, and no history of FVIII inhibitors. After a ≥ 3-day washout, subjects received a single dose of sucrose-formulated rFVIII (rFVIII-FS) (cohort 1 [n = 7], 25 IU kg−1; cohort 2 [n = 7], 50 IU kg−1) for a 48-h pharmacokinetic (PK) study. After another ≥ 3-day washout, cohort 1 received twice-weekly BAY 94-9027 at 25 IU kg−1 (16 doses), and cohort 2 received once-weekly BAY 94-9027 at 60 IU kg−1 (nine doses). A 168-h PK study was performed after the first and last BAY 94-9027 doses. Results BAY 94-9027 showed equivalent recovery and an improved PK profile vs. rFVIII-FS, with a half-life of ∼ 19 h (vs. ∼ 13.0 h for rFVIII-FS). BAY 94-9027 was well tolerated, and no immunogenicity was observed. Conclusions This phase I study demonstrates that BAY 94-9027 has an extended half-life in subjects with hemophilia A and, after multiple dosing, was well tolerated with no immunogenicity during the 8-week trial. A phase III study in a larger number of subjects is underway to fully characterize how this prolonged half-life will permit less frequent prophylaxis dosing for patients with hemophilia. PMID:24843882

  9. Evaluation of the activated partial thromboplastin time assay for clinical monitoring of PEGylated recombinant factor VIII (BAY 94-9027) for haemophilia A.

    PubMed

    Gu, J-M; Ramsey, P; Evans, V; Tang, L; Apeler, H; Leong, L; Murphy, J E; Laux, V; Myles, T

    2014-07-01

    Patients with haemophilia (PWH) are usually monitored by the one-stage activated partial thromboplastin time (aPTT) factor VIII (FVIII) assay. Different aPTT activators may affect clotting time (CT) and FVIII:C levels in patients treated with PEGylated FVIII. To evaluate the characteristics of PEGylated FVIII (BAY 94-9027) in various aPTT clotting assays, and to identify suitable aPTT reagents for monitoring BAY 94-9027 during the treatment of PWH, BAY 94-9027 and World Health Organization (WHO) 8th FVIII standards (WHO-8) were spiked into pooled and individual severe haemophilia A plasma at 1.0, 0.25 and 0.05 IU mL(-1) . Five commercial aPTT reagents widely used in clinical laboratories were compared and evaluated for BAY 94-9027 activity in plasma from PWH. BAY 94-9027 and WHO-8 bestowed similar CT and excellent precision when ellagic acid (SynthAFax, Dade Actin, and Cephascreen) aPTT reagents were used. In contrast, BAY 94-9027 showed significantly prolonged CT and poor precision compared with WHO-8 using silica aPTT reagents (APTT-SP and STA PTT 5). Furthermore, free 60-kDa polyethylene glycol (PEG), used for the conjugation of FVIII, showed a dose-dependent prolongation of CT in the APTT-SP assay. There was no effect on the SynthAFax-APTT, prothrombin time, or FXIa-initiated thrombin generation assay, demonstrating that the PEG moiety on FVIII has no general effect on the coagulation cascade. In summary, ellagic aPTT reagents (SynthAFax, Dade Actin, and Cephascreen) are most suitable for evaluating potency of BAY 94-9027 and should be the preferred aPTT reagents used in clinical laboratories for monitoring FVIII activity after infusion of BAY 94-9027 to PWH.

  10. BAY 81-8973, a full-length recombinant factor VIII: Human heat shock protein 70 improves the manufacturing process without affecting clinical safety.

    PubMed

    Maas Enriquez, Monika; Thrift, John; Garger, Stephen; Katterle, Yvonne

    2016-11-01

    BAY 81-8973 is a full-length, unmodified recombinant human factor VIII (FVIII) approved for the treatment of hemophilia A. BAY 81-8973 has the same amino acid sequence as the currently marketed sucrose-formulated recombinant FVIII (rFVIII-FS) product and is produced using additional advanced manufacturing technologies. One of the key manufacturing advances for BAY 81-8973 is introduction of the gene for human heat shock protein 70 (HSP70) into the rFVIII-FS cell line. HSP70 facilitates proper folding of proteins, enhances cell survival by inhibiting apoptosis, and potentially impacts rFVIII glycosylation. HSP70 expression in the BAY 81-8973 cell line along with other manufacturing advances resulted in a higher-producing cell line and improvements in the pharmacokinetics of the final product as determined in clinical studies. HSP70 protein is not detected in the harvest or in the final BAY 81-8973 product. However, because this is a new process, clinical trial safety assessments included monitoring for anti-HSP70 antibodies. Most patients, across all age groups, had low levels of anti-HSP70 antibodies before exposure to the investigational product. During BAY 81-8973 treatment, 5% of patients had sporadic increases in anti-HSP70 antibody levels above a predefined threshold (cutoff value, 239 ng/mL). No clinical symptoms related to anti-HSP70 antibody development occurred. In conclusion, addition of HSP70 to the BAY 81-8973 cell line is an innovative technology for manufacturing rFVIII aimed at improving protein folding and expression. Improved pharmacokinetics and no effect on safety of BAY 81-8973 were observed in clinical trials in patients with hemophilia A.

  11. Quantitative distribution of the meiobenthos in Baidaratskaya Bay (Kara Sea)

    NASA Astrophysics Data System (ADS)

    Udalov, A. A.; Kondar, D. V.; Miljutina, M. A.; Miljutin, D. M.; Sapojnikov, F. V.; Mokievsky, V. O.

    2017-01-01

    The quantitative characteristics and spatial distribution of the meiobenthos in Baidaratskaya Bay (Kara sea) were analyzed based on data collected in 1994-2007. The extremely high density of the meiobenthos (up to 8121 ind/10 cm2, average 2318 ind/10 cm2) makes it possible to consider Baidaratskaya Bay among the most productive Arctic regions. The spatial distribution of the meiobenthos was mostly determined by the depth and sediment properties in the subtidal zone of the bay. The density of meiobenthic organisms decreased with depth, and with the increase of the small sediment fraction. The difference in the meiobenthic densities between the two coastal areas of the bay (Yamal and Jugora CAs) is also revealed. Such difference caused by the combined effects of small-scale and mesoscale factors, mainly by the grain size. Opposite changes in the meio- and macrobenthic biomass with depth is shown.

  12. Theoretical calculation of nitrogen isotope equilibrium exchange fractionation factors for various NOy molecules

    NASA Astrophysics Data System (ADS)

    Walters, Wendell W.; Michalski, Greg

    2015-09-01

    The nitrogen stable isotope ratio (15N/14N) of nitrogen oxides (NOx = NO + NO2) and its oxidation products (NOy = NOx + PAN (peroxyacetyl nitrate = C2H3NO5) + HNO3 + NO3 + HONO + N2O5 + ⋯ + particulate nitrates) has been suggested as a tool for partitioning NOx sources; however, the impact of nitrogen (N) equilibrium isotopic fractionation on 15N/14N ratios during the conversion of NOx to NOy must also be considered, but few fractionation factors for these processes have been determined. To address this limitation, computational quantum chemistry calculations of harmonic frequencies, reduced partition function ratios (15β), and N equilibrium isotope exchange fractionation factors (αA/B) were performed for various gaseous and aqueous NOy molecules in the rigid rotor and harmonic oscillator approximations using the B3LYP and EDF2 density functional methods for the mono-substitution of 15N. The calculated harmonic frequencies, 15β, and αA/B are in good agreement with available experimental measurements, suggesting the potential to use computational methods to calculate αA/B values for N isotope exchange processes that are difficult to measure experimentally. Additionally, the effects of solvation (water) on 15β and αA/B were evaluated using the IEF-PCM model, and resulted in lower 15β and αA/B values likely due to the stabilization of the NOy molecules from dispersion interactions with water. Overall, our calculated 15β and αA/B values are accurate in the rigid rotor and harmonic oscillator approximations and will allow for the estimation of αA/B involving various NOy molecules. These calculated αA/B values may help to explain the trends observed in the N stable isotope ratio of NOy molecules in the atmosphere.

  13. Tensor Factorization for Precision Medicine in Heart Failure with Preserved Ejection Fraction.

    PubMed

    Luo, Yuan; Ahmad, Faraz S; Shah, Sanjiv J

    2017-01-23

    Heart failure with preserved ejection fraction (HFpEF) is a heterogeneous clinical syndrome that may benefit from improved subtyping in order to better characterize its pathophysiology and to develop novel targeted therapies. The United States Precision Medicine Initiative comes amid the rapid growth in quantity and modality of clinical data for HFpEF patients ranging from deep phenotypic to trans-omic data. Tensor factorization, a form of machine learning, allows for the integration of multiple data modalities to derive clinically relevant HFpEF subtypes that may have significant differences in underlying pathophysiology and differential response to therapies. Tensor factorization also allows for better interpretability by supporting dimensionality reduction and identifying latent groups of data for meaningful summarization of both features and disease outcomes. In this narrative review, we analyze the modest literature on the application of tensor factorization to related biomedical fields including genotyping and phenotyping. Based on the cited work including work of our own, we suggest multiple tensor factorization formulations capable of integrating the deep phenotypic and trans-omic modalities of data for HFpEF, or accounting for interactions between genetic variants at different omic hierarchies. We encourage extensive experimental studies to tackle challenges in applying tensor factorization for precision medicine in HFpEF, including effectively incorporating existing medical knowledge, properly accounting for uncertainty, and efficiently enforcing sparsity for better interpretability.

  14. Seasonal change in body length of important small copepods and relationship with environmental factors in Jiaozhou Bay, China

    NASA Astrophysics Data System (ADS)

    Sun, Xiaohong; Sun, Song; Li, Chaolun; Wang, Minxiao

    2012-05-01

    Differences among species in prosome length and in species' response to environmental factors do exist. Therefore, it is useful to examine prosome length for different copepod species in variable environments. Seasonal variations in prosome length of four small copepods and their copepodite stages in the Jiaozhou Bay were compared and the relative influence of temperature, salinity, and chlorophyll concentration were examined. Two peaks were found in the mean prosome length of Paracalanus parvus (in early winter and May). For Acartia bifilosa, the maximum values of all copepodites occurred mainly from February to April, and decreased to the bottom in July. Prosome length of Acartia pacifica peaked when it first appeared in June, then reached to the minimum in July. Parvocalanus crassirostris only appeared from late summer to autumn and the mean prosome length showed no clear changes. Correlations of adult prosome length with environmental factors were evaluated. For the four species, temperature was negatively correlated to prosome length except for P. crassirostris. But the different species varied markedly in their responds to temperature. A. bifilosa showed a more definite trend of size variation with temperature than P. parvus and A. pacifica. Correlations of prosome length with salinity were significantly positive for almost all the small copepods. The relationship between chlorophyll concentration and prosome length was complicated for these copepods, but for P. parvus, chlorophyll concentration was also an important affecting factor. Furthermore, investigation needs to be done on food quality for some copepod. These results are essential to estimate the biomass and the production, and to understand these small copepods' population dynamics in this human-affected bay.

  15. Electron absorbed fractions and dose conversion factors for marrow and bone by skeletal regions

    SciTech Connect

    Eckerman, K.F.; Stabin, M.G.

    2000-02-01

    The possible inductions of bone cancer and leukemia are the two health effects of primary concern in the irradiation of the skeleton. The relevant target tissues to consider in the dosimetric evaluation have been the cells on or near endosteal surfaces of bone, from which osteosarcomas are thought to arise, and hematopoietic bone marrow, which is associated with leukemia. The complex geometry of the soft tissue-bone intermixture makes calculations of absorbed doses to these target regions a difficult problem. In the case of photon or neutron radiations, charged particle equilibrium may not exist in the vicinity of a soft tissue-bone mineral interface. In this paper, absorbed fraction data are developed for calculations of the dose in the target tissues from electron emitters deposited within the volume or on the surfaces of trabecular bone. The skeletal average absorbed fractions presented are consistent with usage of this quantity in the contemporary dosimetric formulations of the International Commission on Radiological Protection (ICRP). Implementation of the new bone and marrow model is then developed within the context of the calculational schema of the Medical Internal Radiation Dose (MIRD) Committee. Model parameters relevant to the calculation of dose conversion factors (S values) for different regions of the skeleton of individuals of various age are described, and an example calculation is performed for a monoclonal antibody which localizes in the marrow. The utility of these calculations for radiation dose calculations in nuclear medicine is discussed.

  16. [Monthly changes and related affecting factors in community structure and diversity of the crab assemblages in central Jiaozhou Bay, China].

    PubMed

    Pang, Zhi-Wei; Xu, Bin-Duo; Ji, Yu-Peng; Ren, Yi-Ping

    2014-02-01

    Based on the monthly bottom trawl surveys in the central area of Jiaozhou Bay from September 2008 to August 2009, monthly changes and related affecting factors in community structure and diversity of the crab assemblages were examined using index of relative importance, ecological diversity indices, multivariate statistical analysis. In total, 18 crab species were caught and they belonged to 11 families, 17 genera. The relative abundance of crab varied dramatically among months, which was high in June, July and August. The dominant species composition of crab assemblage was observed to vary over months dramatically. The dominant species for the whole year was Charybdis bimaculata, and the dominant species in different specific months were C. bimaculata, C. japonica, Portunus trituberculatus, Raphidopus ciliatus and Eucrate crenata. The ranges across months of the Margalef' s species richness index (D), Shannon diversity index (H) and Pielou's evenness index (J) of the crab community structure were 0.54-2.86, 0.06-2.59 and 0.03-0.97, respectively. The diversity indices in winter months were the highest, and the diversity indices in autumn months were higher than in the spring and autumn months. MDS and CLUSTER analyses revealed that three groups/clusters, which were Group I (from May to October), Group, II (April, November and December) and Group III (January, February and March), were identi- fied for crab community during all the year in the central area of Jiaozhou Bay. ANOSIM analysis in community structure indicated that there were extremely significant differences among the groups, significant differences between Group I and Group II or between Group I and Group III, and no significant differences between Group II and Group III. Typifying species in the within-group included C. bimaculata, P. trituberculatus, C. japonica, E. crenata and R. ciliatus, and discriminating species between groups included C. bimaculata, C. japonica and P. trituberculatus. These

  17. Examination of silicate limitation of primary production in Jiaozhou Bay, China. I. Silicate being a limiting factor of phytoplankton primary production

    NASA Astrophysics Data System (ADS)

    Yang, Dong-Fang; Zhang, Jing; Lu, Ji-Bin; Gao, Zhen-Hui; Chen, Yu

    2002-09-01

    Jiaozhou Bay data collected from May 1991 to February 1994, in 12 seasonal investigations, and provided the authors by the Ecological Station of Jiaozhou Bay, were analyzed to determine the spatiotemporal variations in temperature, light, nutrients (NO{3/-}-N, NO{2/-}-N, NH{4/+}-N, SiO{3/2-}-Si, PO{4/3-}-P), phytoplankton, and primary production in Jiaozhou Bay. The results indicated that only silicate correlated well in time and space with, and had important effects on, the characteristics, dynamic cycles and trends of, primary production in Jiaozhou Bay. The authors developed a corresponding dynamic model of primary production and silicate and water temperature. Eq. (1) of the model shows that the primary production variation is controlled by the nutrient Si and affected by water temperature; that the main factor controlling the primary production is Si; that water temperature affects the composition of the structure of phytoplankton assemblage; that the different populations of the phytoplankton assemblage occupy different ecological niches for C, the apparent ratio of conversion of silicate in seawater into phytoplankton biomas and D, the coefficient of water temperature's effect on phytoplankton biomass. The authors researched the silicon source of Jiaozhou Bay, the biogeochemical sediment process of the silicon, the phytoplankton predominant species and the phytoplankton structure. The authors considered silicate a limiting factor of primary production in Jiaozhou Bay, whose decreasing concentration of silicate from terrestrial source is supposedly due to dilution by current and uptake by phytoplankton; quantified the silicate assimilated by phytoplankton, the intrinsic ratio of conversion of silicon into phytoplankton biomass, the proportion of silicate uptaken by phytoplankton and diluted by current; and found that the primary production of the phytoplankton is determined by the quantity of the silicate assimilated by them. The phenomenon of apparently high

  18. Matching-adjusted indirect comparisons of efficacy of BAY 81-8973 vs two recombinant factor VIII for the prophylactic treatment of severe hemophilia A

    PubMed Central

    Pocoski, Jennifer; Li, Nanxin; Ayyagari, Rajeev; Church, Nikki; Maas Enriquez, Monika; Xiang, Quer; Kelkar, Sneha; Du, Ella X; Wu, Eric Q; Xie, Jipan

    2016-01-01

    Background No head-to-head trials comparing recombinant factor VIII (rFVIII) products currently exist. This was a matching-adjusted indirect comparison (MAIC) study of efficacy of BAY 81-8973 with antihemophilic factor (recombinant) plasma/albumin-free method (rAHF-PFM) and turoctocog alfa for the prophylaxis of severe hemophilia A. Methods A systematic literature review was conducted to identify trials of rAHF-PFM and turoctocog alfa. Comparisons were conducted using BAY 81-8973 individual patient data (IPD) from LEOPOLD trials and published data from rAHF-PFM and turoctocog alfa trials. Differences in outcome reporting were reconciled using transformation of BAY 81-8973 IPD. Patients in pooled LEOPOLD trials were weighted to match baseline characteristics for rAHF-PFM or turoctocog alfa trials using MAICs. After matching, annualized bleed rates (ABRs) were compared using weighted t-tests. Results Two rAHF-PFM trials and one turoctocog alfa trial were identified. In these trials, rFVIIIs were dosed thrice weekly or every other day; in LEOPOLD trials, BAY 81-8973 was dosed twice- or thrice weekly. Three MAICs were conducted because the two rAHF-PFM trials calculated ABRs differently, matching for age, race, and weight (turoctocog alfa only). BAY 81-8973 had similar ABR of all bleeds vs rAHF-PFM (two trials: 4.8 vs 6.3, 1.9 vs 1.8 [square root transform]) and lower ABR of spontaneous bleeds and trauma bleeds (2.6 vs 4.1, 2.1 vs 4.7; both P<0.05). BAY 81-8973 showed lower ABR of all bleeds and spontaneous bleeds vs turoctocog alfa (4.3 vs 6.5, 2.8 vs 4.3; both P<0.05) and similar ABR of trauma bleeds (1.5 vs 1.6). In subgroup analysis, twice-weekly BAY 81-8973 had similar ABRs of all bleeds, spontaneous bleeds, and trauma bleeds compared to rAHF-PFM and turoctocog alfa. Conclusion This indirect comparison found that prophylaxis with BAY 81-8973, even including the lower frequency of two times a week and lower factor VIII consumption, has efficacy comparable to r

  19. Benthic macroinvertebrate associations in relation to environmental factors in Georgian Bay

    SciTech Connect

    Johnson, M.G.; McNeil, O.C.; George, S.E.

    1987-01-01

    Association analysis of data on benthic macroinvertebrates in 257 samples from Georgian Bay, followed by discriminant analysis of water and sediment characteristics, facilitated a quantitative description of trophic variability within a relatively unpolluted system. Discriminating variables were bottom water temperature, water pH and Ca, sediment organic matter, sand, silt, clay, total P, Zn, Pb, and Hg. Four discriminating functions, accounting for 86% of variance, indicated the importance of temperature, concentrations of organic matter and silt, water pH and Ca. Associations which occurred at cooler temperatures consisted of Pontoporeia hoyi with dominant oligochaetes and chironomids generally determined by sediment richness. These associations were P. hoyi - Limnodrilus hoffmeisteri - Chironomus spp, and Procladius spp. at highest sediment richness, P. hoyi - Spirosperma ferox - Micropsectra spp, at intermediate richness and P. hoyi - Stylodrilus heringianus - Heterotrissocladius sp. at lowest richness. Associations in warmer waters consisted of a Chironomus spp. - Chaoborus spp. association in richer sediments and an association of Caecidotea racovitzae and Amnicola spp. at lower sediment richness. A Hexagenia limbata - Hyalella azteca association occurred over a broad range in concentrations of organic matter and silt, but, in terms of sediment texture represented by sand content, this association was intermediate between the other two groups in warmer waters. Finally, a Zalutschia zalutschia zalutschicola - Chaoborus spp. association was related to water pH and Ca in discriminant analysis. 33 references, 4 figures, 4 tables.

  20. The fractionation factors of stable carbon and hydrogen isotope ratios for VOCs

    NASA Astrophysics Data System (ADS)

    Kawashima, H.

    2014-12-01

    Volatile organic compounds (VOCs) are important precursors of ozone and secondary organic aerosols in the atmosphere, some of which are carcinogenic, teratogenic, or mutagenic. VOCs in ambient air originate from many sources, including vehicle exhausts, gasoline evaporation, solvent use, natural gas emissions, and industrial processes, and undergo intricate chemical reactions in the atmosphere. To develop efficient air pollution remediation strategies, it is important to clearly identify the emission sources and elucidate the reaction mechanisms in the atmosphere. Recently, stable carbon isotope ratios (δ13C) of VOCs in some sources and ambient air have been measured by gas chromatography/combustion/isotope ratio mass spectrometry (GC/C/IRMS). In this study, we measured δ13C and stable hydrogen isotope ratios (δD) of atmospheric VOCs by using the gas chromatography/thermal conversion/isotope ratio mass spectrometry coupled with a thermal desorption instrument (TD-GC/TC/IRMS). The wider δD differences between sources were found in comparison with the δ13C studies. Therefore, determining δD values of VOCs in ambient air is potentially useful in identifying VOC sources and their reactive behavior in the atmosphere. However, to elucidate the sources and behavior of atmospheric VOCs more accurately, isotopic fractionation during atmospheric reaction must be considered. In this study, we determined isotopic fractionation of the δ13C and δD values for the atmospheric some VOCs under irradiation conditions. As the results, δ13C for target all VOCs and δD for most VOCs were increasing after irradiation. But, the δD values for both benzene and toluene tended to decrease as irradiation time increased. We also estimated the fractionation factors for benzene and toluene, 1.27 and 1.05, respectively, which differed from values determined in previous studies. In summary, we were able to identify an inverse isotope effect for the δD values of benzene and toluene

  1. Relationship between environmental factors and plankton in the Bayuquan Port, Liaodong Bay, China: a five-year study

    NASA Astrophysics Data System (ADS)

    Song, Lun; Yang, Guojun; Wang, Nianbin; Lu, Xiaoqian

    2016-07-01

    To understand the relationship between the plankton community and environmental factors and water quality in the Bayuquan Port of Liaodong Bay, China, and investigations were carried out during six different periods (April 2009, April 2010, October 2011, April 2012, October 2012, and April 2013). This area was characterized by high levels of nutrient and suspended solids (SPS) during survey periods, and eutrophication led to the occurrence of red tides in April and October 2012 and April 2013. Our analyses revealed that the plankton communities of Bayuquan Port lacked stability and were affected seriously by external disturbance (e.g., oceanographic engineering and river runoff). Our data indicate that oil, dissolved inorganic nitrogen (DIN), SPS, and chlorophyll a (Chl- a) were key factors that regulated the phytoplankton and zooplankton communities. The partial redundancy analysis (partial RDA) suggested that oil and SPS were the most important environmental variables affecting the phytoplankton community in April 2010 and 2012, whereas DIN concentration played a governing role in zooplankton dynamics. Oil and Chl- a concentrations affected significantly the zooplankton community in October 2012. Therefore, the plankton communities could reflect both dynamic changes in coastal environmental factors and the ongoing eutrophication process caused by anthropogenic activities in this area.

  2. Optimisation of the Factor VIII yield in mammalian cell cultures by reducing the membrane bound fraction.

    PubMed

    Kolind, Mille Petersen; Nørby, Peder Lisby; Berchtold, Martin Werner; Johnsen, Laust Bruun

    2011-02-20

    In vivo, clotting Factor VIII (FVIII) circulates in plasma bound to von Willebrand factor (vWF), and the vWF:FVIII complex prevents binding of FVIII to phosphatidylserine (PS). Activation of FVIII by thrombin releases FVIII from vWF, and subsequently FVIII binds to PS exposed on activated platelets and forms the tenase complex together with clotting Factor IX. In vitro, during serum free production of recombinant FVIII (rFVIII), production cells also expose PS, and since vWF is not present to hinder interaction of secreted rFVIII with PS, rFVIII is partly associated with the cell membrane of the production cells. Recently, we showed that as much as 90% of secreted rFVIII is bound to transiently transfected production cells during serum free conditions. In this study, we investigated the effect of including vWF in the serum free medium, and demonstrate that addition of vWF results in release of active membrane bound rFVIII to the culture medium. Moreover, the attachment of rFVIII to cell membranes of un-transfected HEK293 cells was studied in the presence of compounds that competes for interactions between rFVIII and PS. Competitive assays between iodinated rFVIII (¹²⁵I-rFVIII) and annexin V or ortho-phospho-L-serine (OPLS) demonstrated that annexin V and OPLS were able to reduce the membrane bound fraction of rFVIII by 70% and 30%, respectively. Finally, adding OPLS to CHO cells stably expressing FVIII increased the yield by 50%. Using this new knowledge, the recovery of rFVIII could be increased considerably during serum free production of this therapeutic protein.

  3. Fractions of Rechtschaffner matrices as supersaturated designs in screening experiments aimed at evaluating main and two-factor interaction effects.

    PubMed

    Cela, R; Phan-Tan-Luu, R; Claeys-Bruno, M; Sergent, M

    2012-04-06

    Optimal fractions of resolution V design matrices proposed by Rechtschaffner in 1967 are developed and applied as supersaturated designs in screening experiments. Rechtschaffner matrices allow evaluation of all main factors and two-factor interactions, which in many real-world studies are of practical significance. However, the number of experimental runs increases rapidly with the number of factors in the matrices, which are therefore impractical for more than 5-6 factors. On the contrary, saturated fractions based on Hadamard matrices, which are commonly applied in screening studies, cannot evaluate the interaction effects. Here, a procedure for selecting the optimum fractions of Rechtschaffner matrices is presented and provides supersaturated matrices that are well adapted to a variety of problems, thus allowing the development of screening studies with a relatively small number of experiments. The procedures developed to derive the size-reduced matrices and to evaluate the active factors are discussed and compared in terms of efficiency and reliability, by means of simulation studies and application to a real problem. These fractions are the first supersaturated design matrices capable of estimating interaction effects. Additionally, one important advantage of these supersaturated matrices is that they enable development of follow-up procedures in cases of inconclusive results, by enlarging the matrix and eventually resolving the full Rechtschaffner matrix of departure when it is necessary to evaluate the active factors and their interactions.

  4. STIMULATION OF DEFENSE FACTORS FOR OYSTERS DEPLOYED TO CONTAMINATED SITES IN PENSACOLA BAY, FLORIDA

    EPA Science Inventory

    A positive association between chemical contaminants and defense factors has been established for eastern oysters (Crassostrea virginica) from Florida, but it is unknown whether such factors can be stimulated through short-term exposure to contaminants in the field. Hatchery oyst...

  5. FACTORS AFFECTING TIME-ACTIVITY BUDGETS OF BUFFLEHEAD WINTERING IN NARRAGANSETT, BAY, RI

    EPA Science Inventory

    Daily activities of wintering waterfowl can be influenced by the physical environment and by habitat factors such as prey abundance and availability. We examined variability in diurnal activity budgets of Bufflehead (Bucephala albeola) wintering at seven locations within Narragan...

  6. Determination of water-soluble and insoluble (dilute-HCl-extractable) fractions of Cd, Pb and Cu in Antarctic aerosol by square wave anodic stripping voltammetry: distribution and summer seasonal evolution at Terra Nova Bay (Victoria Land).

    PubMed

    Annibaldi, A; Truzzi, C; Illuminati, S; Bassotti, E; Scarponi, G

    2007-02-01

    Eight PM10 aerosol samples were collected in the vicinity of the "Mario Zucchelli" Italian Antarctic Station (formerly Terra Nova Bay Station) during the 2000-2001 austral summer using a high-volume sampler and precleaned cellulose filters. The aerosol mass was determined by differential weighing of filters carried out in a clean chemistry laboratory under controlled temperature and humidity. A two-step sequential extraction procedure was used to separate the water-soluble and the insoluble (dilute-HCl-extractable) fractions. Cd, Pb and Cu were determined in the two fractions using an ultrasensitive square wave anodic stripping voltammetric (SWASV) procedure set up for and applied to aerosol samples for the first time. Total extractable metals showed maxima at midsummer for Cd and Pb and a less clear trend for Cu. In particular, particulate metal concentrations ranged as follows: Cd 0.84-9.2 microg g(-1) (average 4.7 microg g(-1)), Pb 13.2-81 microg g(-1) (average 33 microg g(-1)), Cu 126-628 microg g(-1) (average 378 microg g(-1)). In terms of atmospheric concentration, the values were: Cd 0.55-6.3 pg m(-3) (average 3.4 pg m(-3)), Pb 8.7-48 pg m(-3) (average 24 pg m(-3)), Cu 75-365 pg m(-3) (average 266 pg m(-3)). At the beginning of the season the three metals appear widely distributed in the insoluble (HCl-extractable) fraction (higher proportions for Cd and Pb, 90-100%, and lower for Cu, 70-90%) with maxima in the second half of December. The soluble fraction then increases, and at the end of the season Cd and Pb are approximately equidistributed between the two fractions, while for Cu the soluble fraction reaches its maximum level of 36%. Practically negligible contributions are estimated for crustal and sea-spray sources. Low but significant volcanic contributions are estimated for Cd and Pb (approximately 10% and approximately 5%, respectively), while there is an evident although not quantified marine biogenic source, at least for Cd. The estimated natural

  7. Empirical Bayes factor analyses of quantitative trait loci for gestation length in Iberian × Meishan F2 sows.

    PubMed

    Casellas, J; Varona, L; Muñoz, G; Ramírez, O; Barragán, C; Tomás, A; Martínez-Giner, M; Ovilo, C; Sánchez, A; Noguera, J L; Rodríguez, M C

    2008-02-01

    The aim of this study was to investigate chromosomal regions affecting gestation length in sows. An experimental F2 cross between Iberian and Meishan pig breeds was used for this purpose and we genotyped 119 markers covering the 18 porcine autosomal chromosomes. Within this context, we have developed a new empirical Bayes factor (BF) approach to compare between nested models, with and without the quantitative trait loci (QTL) effect, and after including the location of the QTL as an unknown parameter in the model. This empirical BF can be easily calculated from the output of a Markov chain Monte Carlo sampling by averaging conditional densities at the null QTL effects. Linkage analyses were performed in each chromosome using an animal model to account for infinitesimal genetic effects. Initially, three QTL were detected at chromosomes 6, 8 and 11 although, after correcting for multiple testing, only the additive QTL located in cM 110 of chromosome 8 remained. For this QTL, the allelic effect of substitution of the Iberian allele increased gestation length in 0.521 days, with a highest posterior density region at 95% ranged between 0.121 and 0.972 days. Although future studies are necessary to confirm if detected QTL is relevant and segregating in commercial pig populations, a hot-spot on the genetic regulation of gestation length in pigs seems to be located in chromosome 8.

  8. Antinutritional factors and functionality of protein-rich fractions of industrial guar meal as affected by heat processing.

    PubMed

    Nidhina, N; Muthukumar, S P

    2015-04-15

    Proximate composition analysis and antinutritional factor composition of different fractions of industrial guar meal: raw churi (IRC), heated churi (IHC), final churi (IFC) and guar korma (IGK) were studied and compared. Protein content was found to be very high in IGK (52.7%) when compared to the churi fractions (32-33%) and the trypsin inhibitor activities were found to be negligible in all the fractions (0.58-1.8 mg/g). Single fraction (IGK) was selected for further studies, based on the protein content. The antinutritional factors of selected fractions were significantly reduced by different heat treatments. Heat treatments significantly increased the water absorbing capacity of IGK, but reduced the nitrogen solubility, emulsifying and foaming capacity. Highest L(∗) value was observed for boiled IGK, highest a(∗) and b(∗) values for roasted IGK, during colour measurement. FTIR spectral analysis revealed the presence several aromatic groups in IGK and slight modifications in the molecular structure during heat treatments.

  9. Chios mastic fractions in experimental colitis: implication of the nuclear factor κB pathway in cultured HT29 cells.

    PubMed

    Papalois, Apostolos; Gioxari, Aristea; Kaliora, Andriana C; Lymperopoulou, Aikaterini; Agrogiannis, George; Papada, Efstathia; Andrikopoulos, Nikolaos K

    2012-11-01

    The Pistacia lentiscus tree gives a resinous exudate called Chios mastic (CM) rich in triterpenoids. CM can be fractionated into acidic and neutral fractions (AF and NF, respectively). Oleanolic acid (OA) is a major triterpenic acid in CM with several antioxidant and anti-inflammatory properties. We have recently shown that CM is beneficial in experimental colitis in the form of powder mixture with inulin, as supplied commercially. However, the bioactive fraction or compound of CM is unidentified. Thus, based on the hypothesis that terpenoids exhibit functional activities via distinguishable pathways, we fractionated CM and applied different fractions or individual OA in experimental colitis. Furthermore, we investigated the mechanism underlying this effect in human colon epithelial cells. CM powder mixture (100 mg/kg of body weight) or the respective CM powder mixture components (i.e., inulin, AF, NF, or OA) were individually administered in trinitrobenzene sulfonic acid-treated rats. Colonic damage was assessed microscopically, and levels of tumor necrosis factor-α (TNF-α), interleukin (IL)-6, IL-8, and intercellular adhesion molecule-1were measured. A model of inflammation in co-cultured human colon epithelial HT29 cells and monocytes/macrophages was established. Lactate dehydrogenase release and levels of TNF-α, IL-8, and nuclear factor-κB (NF-κB) p65 were measured. In vivo, histological amelioration of colitis and significant regulation in inflammation occurred with CM powder mixture, even at the mRNA level. Although no histological improvement was observed, AF and NF reduced levels of inflammatory markers. Inulin was ineffective. In vitro, CM treatment down-regulated IL-8 and NF-κB p65. Neither fractions nor OA was the bioactive component solely. Most probably, the entire CM rather than its individual fractions reduces inflammation via NF-κB regulation.

  10. Distribution of the Euryhaline Squid Lolliguncula brevis in Chesapeake Bay: Effects of Selected Abiotic Factors

    DTIC Science & Technology

    2002-01-31

    significant aquatic habitats where cephalopods are poorly represented. One notable squid, the brief squid Lolliguncula brevis, is the only species of... cephalopod frequently found in low-salinity estuaries (Vecchione 1991a), where it tolerates salinities as low as 8.5‰ for brief periods (Laughlin...effects of selected abiotic factors I. K. Bartol1,*, R. Mann2, M. Vecchione3 1Department of Organismic Biology, Ecology, and Evolution , University of

  11. Factors that influence the hydrologic recovery of wetlands in the Northern Tampa Bay area, Florida

    USGS Publications Warehouse

    Metz, P.A.

    2011-01-01

    Although of less importance than the other three factors, a low-lying topographical position benefited the hydrologic condition of several of the study wetlands (S-68 Cypress and W-12 Cypress) both before and after the reductions in groundwater withdrawals. Compared to wetlands in a higher topographical position, those in a lower position had longer hydroperiods because of their greater ability to receive more runoff from higher elevation wetlands and to establish surface-water connections to other isolated wetlands and surface-water bodies through low-lying surface-water channels during wet conditions. In addition, wetlands in low-lying areas benefited from groundwater inflow when groundwater levels were higher than wetland water levels.

  12. Controlling factors of recent clastic coastal sediments (Viransehir, Mersin bay, S Turkey)

    NASA Astrophysics Data System (ADS)

    Gül, Murat; Özbek, Ahmet; Kurt, Mehmet Ali; Zorlu, Kemal

    2009-04-01

    The Plio-Quaternary conglomeratic sets within the marine environment of the Viranşehir coast (W Mersin, S Turkey) are responsible for the evolution of sandy and gravely beaches due to their control on various factors such as sea floor irregularity, wave energy, and organic activity. The conglomeratic sets close to the shoreline (50-150 cm) act as wave breakers, creating hard substratum and high energy, well-oxygenated environment for organisms like Patella sp., Phoronida worms and Brachidontes pharaonis (Fischer P. 1870). The boring activities of these organisms have disintegrated the sandy matrix of these sets. Finer-grained matrix sediments have been transported to the interset and open sea, while cobble-pebbles have been carried landwards and have created imbricated gravely beach deposits without matrix. Sandy beach is evolving where the conglomeratic sets away from the shoreline (5.0-10.0 m). In this example, sets form a bar; causing fivefold division as backshore, berm, surf zone, bar and offshore from land to sea. Poorly sorted, cobbles-pebbles cobbles and pebbles are found associated with the high-energy environments of bars, whilst well-sorted sands are observed in low energetic environments on shore. The sets and recent shell fragments are the main sources of coastal sediments in Viranşehir. However, the amount of shell fragments decrease towards the active river mouth. This is due to sediment and fresh water influx from the river causing deteriorated temperature, salinity and light penetration of the marine environment resulting in less organic diversity.

  13. Seasonal variability of equilibrium factor and unattached fractions of radon and thoron in different regions of Punjab, India.

    PubMed

    Saini, Komal; Singh, Parminder; Singh, Prabhjot; Bajwa, B S; Sahoo, B K

    2017-02-01

    A survey was conducted to estimate equilibrium factor and unattached fractions of radon and thoron in different regions of Punjab state, India. Pin hole based twin cup dosimeters and direct progeny sensor techniques have been utilized for estimation of concentration level of radon, thoron and their progenies. Equilibrium factor calculated from radon, thoron and their progenies concentration has been found to vary from 0.15 to 0.80 and 0.008 to 0.101 with an average value of 0.44 and 0.036 for radon and thoron respectively. Equilibrium factor for radon has found to be highest in winter season and lowest in summer season whereas for thoron highest value is observed in winter and rainy season and lowest in summer. Unattached fractions of radon and thoron have been found to vary from 0.022 to 0.205 and 0.013 to 0.212 with an average value of 0.099 and 0.071 respectively. Unattached fractions have found to be highest in winter season and lowest in rainy and summer season.

  14. Uranium isotopic fractionation factors during U(VI) reduction by bacterial isolates

    NASA Astrophysics Data System (ADS)

    Basu, Anirban; Sanford, Robert A.; Johnson, Thomas M.; Lundstrom, Craig C.; Löffler, Frank E.

    2014-07-01

    We experimentally determined the magnitude of uranium isotopic fractionation induced by U(VI) reduction by metal reducing bacterial isolates. Our results indicate that microbial U(VI) reduction induces isotopic fractionation; heavier isotopes (i.e., 238U) partition into the solid U(IV) products. The magnitudes of isotopic fractionation (expressed as ε = 1000‰ * (α-1)) for 238U/235U were 0.68‰ ± 0.05‰ and 0.99‰ ± 0.12‰ for Geobacter sulfurreducens strain PCA and strain IFRC-N, respectively. The ε values for Anaeromyxobacter dehalogenans strain FRC-W, strain FRC-R5, a novel Shewanella isolate, and Desulfitobacterium sp. strain Viet1 were 0.72‰ ± 0.15‰, 0.99‰ ± 0.12‰, 0.96‰ ± 0.16‰ and 0.86‰ ± 0.06‰, respectively. Our results show that the maximum ε values of ∼1.0‰ were obtained with low biomass (∼107 cells/mL) and low electron donor concentrations (∼500 μM). These results provide an initial assessment of 238U/235U shifts induced by microbially-mediated U(VI) reduction, which is needed as 238U/235U data are increasingly applied as redox indicators in various geochemical settings.

  15. Importance of a quality assurance scheme for factor VIII assays in quality monitoring of human plasma destined for fractionation into factor VIII concentrate.

    PubMed

    Gabra, G S; Prowse, C V; Boulton, F E

    1989-01-01

    A national quality assurance scheme has been established to monitor the validity of factor VIII assays performed by the various laboratories of the Scottish National Blood Transfusion Service engaged in collection and processing of donor plasma destined for fractionation. The results over the first 3-year period show that comparable assay values can be obtained by participating centres using a common standard, despite differences in equipment, methods or substrate chosen for the one-stage assay. The results also showed that chromogenic factor VIII assays correlated well with the one-stage method. Random factor VIII assays performed on plasma, harvested and frozen within 18 h from collection, were analysed to validate recently proposed Scottish specifications which stipulate that 70% of plasma donations destined for fractionation should contain at least 0.7 IU/ml. Plasma harvested and frozen between 8 and 18 h from collection did not meet the specified level in any of the regional centres. This nationally specified level was also not met by plasma harvested and frozen within 8 h from collection in spite of being achieved individually by three regional centres. Assays performed on large plasma pools at the Fractionation Centre suggested loss of some factor VIII during storage, transportation and thawing of plasma prior to bulk processing.

  16. Chlorinated hydrocarbon pesticides and polychlorinated biphenyls in sediment cores from San Francisco Bay

    USGS Publications Warehouse

    Venkatesan, M.I.; De Leon, R. P.; VanGeen, A.; Luoma, S.N.

    1999-01-01

    Sediment cores of known chronology from Richardson and San Pablo Bays in San Francisco Bay, CA, were analyzed for a suite of chlorinated hydrocarbon pesticides and polychlorinated biphenyls to reconstruct a historic record of inputs. Total DDTs (DDT = 2,4'- and 4,4'-dichlorodiphenyltrichloroethane and the metabolites, 2,4'- and 4,4'-DDE, -DDD) range in concentration from 4-21 ng/g and constitute a major fraction (> 84%) of the total pesticides in the top 70 cm of Richardson Bay sediment. A subsurface maximum corresponds to a peak deposition date of 1969-1974. The first measurable DDT levels are found in sediment deposited in the late 1930's. The higher DDT inventory in the San Pablo relative to the Richardson Bay core probably reflects the greater proximity of San Pablo Bay to agricultural activities in the watershed of the Sacramento and San Joaquin rivers. Total polychlorinated biphenyls (PCBs) occur at comparable levels in the two Bays (< 1-34 ng/g). PCBs are first detected in sediment deposited during the 1930's in Richardson Bay, about a decade earlier than the onset of detectable levels of DDTs. PCB inventories in San Pablo Bay are about a factor of four higher in the last four decades than in Richardson Bay, suggesting a distribution of inputs not as strongly weighed towards the upper reaches of the estuary as DDTs. The shallower subsurface maximum in PCBs compared to DDT in the San Pablo Bay core is consistent with the imposition of drastic source control measures four these constituents in 1970 and 1977 respectively. The observed decline in DDT and PCB levels towards the surface of both cores is consistent with a dramatic drop in the input of these pollutants once the effect of sediment resuspension and mixing is taken into account.

  17. INTERTIDAL SEDIMENT TEMPERATURE VARIANCE AS A POSSIBLE LIMITING FACTOR FOR EELGRASSES ZOSTERA MARINA AND ZOSTERA JAPONICA IN YAQUINA BAY, OR

    EPA Science Inventory

    The eelgrass species Zostera marina and Z. japonica co-occur in most Pacific Northwest estuaries; Z. marina is regarded as a native species, Z. japonica as non-indigenous, introduced in Yaquina Bay in approximately 1975. The mean tidal range is ~2 m, extreme ~3m. The vertical d...

  18. The role of transforming growth factor β1 in fractional laser resurfacing with a carbon dioxide laser.

    PubMed

    Jiang, Xia; Ge, Hongmei; Zhou, Chuanqing; Chai, Xinyu; Deng, Hui

    2014-03-01

    The aim of this study was to investigate the role of transforming growth factor β1 in mechanisms of cutaneous remodeling induced by fractional carbon dioxide laser treatment. The dorsal skin of Kunming mice was exposed to a single-pass fractional CO2 laser treatment. Biopsies were taken at 1 h and at 1, 3, 7, 14, 21, 28, and 56 days after treatment. Transforming growth factor (TGF) β1 expression in skin samples was evaluated by ELISA, dermal thickness by hematoxylin-eosin staining, collagen and elastic fibers by Ponceau S and Victoria blue double staining, and types I and III collagens by ELISA. The level of TGF β1 in the laser-treated areas of skin was significantly increased compared with that in the control areas on days 1 (p < 0.05), 3 (p < 0.01), and 7 (p < 0.05) and then decreased by day 14 after treatment, at which time it had returned to the baseline level. Dermal thickness and the amount of type I collagen of the skin of the laser-treated areas had increased significantly (p < 0.05) compared with that in control areas on days 28 and 56. Fibroblast proliferation showed a positive correlation with TGF β1 expression during the early stages (r = 0.789, p < 0.01), and there was a negative correlation between the level of TGF β1 and type I collagen in the late stages, after laser treatment (r = -0.546, p < 0.05). TGF β1 appears to be an important factor in fractional laser resurfacing.

  19. Review of Exculsive B to D(*,**)Lnu Decays: Branching Fractions, Form-Factors And |V(Cb|

    SciTech Connect

    Snyder, A.E.; /SLAC

    2007-04-02

    This paper reviews semileptonic decays of B-mesons to states containing charm mesons, i.e., D, D*, D** and possible non-resonant D{sup (*)}{eta}{pi} states as well. The paper covers measurement of branching fractions, form-factors and, most importantly, the magnitude of the CKM matrix element V{sub cb}. I will not attempt a comprehensive review, but will concentrate on reasonably fresh results and consider mostly exclusive measurements. I will also comment on the consistency of the results and what needs to be done to resolve the apparent conflicts.

  20. Chemical/physical separations of alternate petroleum distillates. I. Average instrumental response factors for well defined fossil fuel fractions. [Monoaromatics, diaromatics, triaromatics

    SciTech Connect

    Thomson, J.S.; Reynolds, J.W.; Treese, C.A.; Tang, S.Y.; Hirsch, D.E.

    1985-03-11

    Narrow heart-cut fractions of Cerro Negro and Wilmington crude oil acid- and base-free distillates were prepared on a preparative dinitroanilinopropylsilica (DNAP) column by a gradient solvent program. The fractions were characterized by synchronized scanning fluorimetry and gas chromatography/mass spectrometry. Average instrument response factors for ultraviolet spectroscopy and gas chromatography/flame ionization detection were determined on the heart-cut fractions. 3 figures, 4 tables.

  1. Value of DNA Ploidy and S-Phase Fraction as Prognostic Factors in Stage III Cutaneous Melanoma

    PubMed Central

    Martin, Ginette; Halwani, Fawaz; Shibata, Henry; Meterissian, Sarkis

    2000-01-01

    Objective To determine the prognostic value of flow cytometric analysis (S-phase fraction and DNA index) performed on lymph-node metastases of patients with stage III melanoma. Design A retrospective chart review with flow cytometric analysis of paraffin-embedded tissues. Setting A university teaching hospital. Patients Among 332 patients with cutaneous melanoma, 33 with stage III were identified. Distant metastases developed in 16 patients; 17 had no further recurrence. Charts were reviewed to obtain clinicopathologic parameters such as sex, age, location of the primary tumour, histologic features, presence or absence of ulceration, and Clark’s and Breslow’s levels. Intervention DNA ploidy and S-phase fraction were determined on the paraffin-embedded nodes. Main outcome measures The groups with or without recurrence were compared in terms of disease-free survival (DFS) and overall survival (OS). These survival parameters were correlated with DNA ploidy and S-phase fraction. Results By univariate analysis, clinicopathologic factors did not predict OS. A higher Clark’s level of invasion and more than 3 positive lymph nodes were associated with shorter DFS (p < 0.05). Tumour thickness and S-phase fraction did not correlate with either DFS or OS. Patients with diploid lymph-node metastases had an 87% 12-month survival compared with 41% for those with aneuploid tumours. Conclusions DNA ploidy may be used as a prognostic index in patients with lymph-node metastases. This could be particularly useful in the context of sentinel lymph-node mapping by which more patients are being identified with single microscopic lymph-node involvement. PMID:10714254

  2. Fraction Reduction through Continued Fractions

    ERIC Educational Resources Information Center

    Carley, Holly

    2011-01-01

    This article presents a method of reducing fractions without factoring. The ideas presented may be useful as a project for motivated students in an undergraduate number theory course. The discussion is related to the Euclidean Algorithm and its variations may lead to projects or early examples involving efficiency of an algorithm.

  3. First Principles Calculation on Equilibrium Si Isotope Fractionation Factors and its Implementation on Si Isotope Distributions in Earth Surface Environments

    NASA Astrophysics Data System (ADS)

    Liu, Y.; He, H. T.; Zhu, C.

    2014-12-01

    Several important equilibrium Si isotope fractionation factors are calculated here. We use a so-called volume-variable-cluster-model (VVCM) method for solids and the "water-droplet" method for aqueous species for isotope fractionation calculation at the same quantum chemistry level. The calculation results show that several silicate minerals, such as quartz, feldspar, kaolinite, etc., all enrich heavy Si isotopes relative to aqueous H4SiO4 and can be up to 3.3‰ at 25°C, different from most field observations. Meanwhile stable organosilicon complexes can enrich even lighter Si isotopes than aqueous H4SiO4. For explaining the difference between the calculation results and field observations, we calculate the kinetic isotope effect (KIE) associated with the formation of amorphous silica, and find that amorphous silica will enrich extremely light Si isotopes. From amorphous silica to crystalline quartz, the structural adjustment & transition needs getting rid of small amount of Si to re-organize the structure. Light Si isotopes will be preferentially lost and let the final crystalline quartz with a little bit more heavy Si isotopes. However, such late-stage Si heavy isotope enrichment cannot erase the total isotopic signal, crystalline quartz still inherit much light Si isotopic composition from amorphous quartz. That is the reason for the discrepancy between the calculation results and the field observations, because the formation of amorphous quartz is under a non-equilibrium process but theoretical calculations are for equilibrium isotope fractionations. With accurate equilibrium fractionation factors provided here, Si isotope distributions in earth surface environments including soil, groundwater and plants can be further interpreted. We find that δ30Si variations in soil are mainly driven by secondary minerals precipitation and adsorption. Also, bulk soil δ30Si maybe have a parabolic distribution with soil age, with a minimum value at where allophane is

  4. Quantitative polymerase chain reaction for transforming growth factor-β applied to a field study of fish health in Chesapeake Bay tributaries

    USGS Publications Warehouse

    Harms, Craig A.; Ottinger, Christopher A.; Blazer, Vicki S.; Densmore, Christine L.; Pieper, L.H.; Kennedy-Stoskopf, S.

    2000-01-01

    Fish morbidity and mortality events in Chesapeake Bay tributaries have aroused concern over the health of this important aquatic ecosystem. We applied a recently described method for quantifying mRNA of an immunosuppressive cytokine, transforming growth factor-β (TGF-β), by reverse transcription quantitative-competitive polymerase chain reaction to a field study of fish health in the Chesapeake Basin, and compared the results to those of a traditional cellular immunoassay macrophage bactericidal activity. We selected the white perch (Morone americana) as the sentinel fish species because of its abundance at all of the collection sites. White perch were sampled from Chesapeake Bay tributaries in June, August, and October 1998. Splenic mononuclear cell TGF-β mRNA levels increased and anterior kidney macrophage bactericidal activity decreased, particularly in eastern shore tributaries, from June to August and October. The results of the two assays correlated inversely (Kendall's τ b = -0.600; p = 0.0102). The results indicated both temporal and spatial modulation of white perch immune systems in the Chesapeake Basin, and demonstrated the utility of quantitative PCR for TGF-β as a molecular biomarker for field assessment of teleost fish immune status.

  5. Interactions between aggregations and environmental factors explain spatio-temporal patterns of the brittle-star Ophiothrix fragilis in the eastern Bay of Seine

    NASA Astrophysics Data System (ADS)

    Dauvin, Jean-Claude; Méar, Yann; Murat, Anne; Poizot, Emmanuel; Lozach, Sophie; Beryouni, Khadija

    2013-10-01

    There is a paucity of studies showing long-term changes in the population dynamics of dominant benthic epifaunal species, especially echinoderms, in relation to biological and environmental factors. In the English Channel, the brittle-star Ophiothrix fragilis is a common epifaunal species, mainly found in strong tidal currents characterised by benthic habitats with pebbles. However, in the Bay of Seine, O. fragilis lives on gravel and coarse sandy sediments; more locally, it occurs where there are unexpected amounts of fine particles for such high hydrodynamic areas. This species forms dense aggregations, supporting large populations up to 7450 ind m-2. This paper analyses the long-term spatio-temporal changes of O. fragilis aggregations over the last 25 years in the eastern part of the Bay of Seine through observations obtained from several scientific programmes from 1986 to 2010. This area is characterised as a tidal environment affected by the Seine estuary and is subject to potential sediment supply from the dumping site of the Le Havre harbour dredging operations. During all surveys, there was a similar pattern: persistent patches with high abundances of O. fragilis and sites without O. fragilis, showing that there was a high heterogeneity of the spatial population pattern. Interactions between environmental conditions and ophiurid aggregations (e.g., storm waves, Seine floods and patches) are suggested to explain these patterns.

  6. Narragansett Bay

    EPA Science Inventory

    Narragansett Bay, situated on the eastern side of Rhode Island, comprises about 15% of the State’s total area. Ninety-five percent of the Bay’s surface area is in Rhode Island with the remainder in southeastern Massachusetts; 60% of the Bay’s watershed is in Massachusetts. At the...

  7. James Bay

    Atmospheric Science Data Center

    2013-04-17

    article title:  First Light over James Bay     View Larger Image MISR "First light", 16:40 UTC, 24 February 2000 . This is the first image of Earth's ... the line of flight. At the top of the image, the dark-to-light transition captures the opening of the MISR cover. Progressing southward, ...

  8. Transcription Factor EB Is Selectively Reduced in the Nuclear Fractions of Alzheimer's and Amyotrophic Lateral Sclerosis Brains

    PubMed Central

    Wang, Hongjie

    2016-01-01

    Multiple studies suggest that autophagy is strongly dysregulated in Alzheimer's disease (AD) and amyotrophic lateral sclerosis (ALS), as evidenced by accumulation of numerous autophagosomes, lysosomes with discontinuous membranes, and aggregated proteins in the patients' brains. Transcription factor EB (TFEB) was recently discovered to be a master regulator of lysosome biogenesis and autophagy. To examine whether aberrant autophagy in AD and ALS is due to alterations in TFEB expression, we systematically quantified the levels of TFEB in these brains by immunoblotting. Interestingly, cytoplasmic fractions of AD brains showed increased levels of normalized (to tubulin) TFEB only at Braak stage IV (61%, p < 0.01). Most importantly, normalized (to lamin) TFEB levels in the nuclear fractions were consistently reduced starting from Braak stage IV (52%, p < 0.01), stage V (67%, p < 0.01), and stage VI (85%, p < 0.01) when compared to normal control (NC) brains. In the ALS brains also, nuclear TFEB levels were reduced by 62% (p < 0.001). These data suggest that nuclear TFEB is selectively lost in ALS as well as AD brains, in which TFEB reduction was Braak-stage-dependent. Taken together, the observed reductions in TFEB protein levels may be responsible for the widely reported autophagy defects in these disorders. PMID:27433468

  9. Evaluation of Potential Protective Factors Against Metabolic Syndrome in Bottlenose Dolphins: Feeding and Activity Patterns of Dolphins in Sarasota Bay, Florida

    PubMed Central

    Wells, Randall S.; McHugh, Katherine A.; Douglas, David C.; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B.; Phillips, Goldie T.

    2013-01-01

    Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins. PMID:24133483

  10. Evaluation of potential protective factors against metabolic syndrome in bottlenose dolphins:feeding and activity patterns of dolphins in Sarasota Bay, Florida

    USGS Publications Warehouse

    Wells, Randall S.; McHugh, Katherine A.; Douglas, David C.; Shippee, Steve; McCabe, Elizabeth Berens; Barros, Nélio B.; Phillips, Goldie T.

    2014-01-01

    Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins.

  11. Is drinking water a risk factor for endemic cryptosporidiosis? A case-control study in the immunocompetent general population of the San Francisco Bay Area

    PubMed Central

    Khalakdina, Asheena; Vugia, Duc J; Nadle, Joelle; Rothrock, Gretchen A; Colford, John M

    2003-01-01

    Background Cryptosporidiosis, caused by Cryptosporidium, is an enteric illness that has received much attention as an infection of immunocompromised persons as well as in community outbreaks (frequently waterborne). There are, however, no studies of the risk factors for sporadic community-acquired cryptosporidiosis in the immunocompetent US population. We undertook a case-control study in the San Francisco Bay Area as part of a national study sponsored by the Centers for Disease Control and Prevention to ascertain the major routes of transmission for endemic cryptosporidiosis, with an emphasis on evaluating risk from drinking water. Methods Cases were recruited from a population-based, active surveillance system and age-matched controls were recruited using sequential random-digit dialing. Cases (n = 26) and controls (n = 62) were interviewed by telephone using a standardized questionnaire that included information about the following exposures: drinking water, recreational water, food items, travel, animal contact, and person-to-person fecal contact, and (for adults) sexual practices. Results In multivariate conditional logistic regression analyses no significant association with drinking water was detected. The major risk factor for cryptosporidiosis in the San Francisco Bay Area was travel to another country (matched odds ratio [95% confidence interval]: 24.1 [2.6, 220]). Conclusion The results of this study do not support the hypothesis that drinking water is an independent risk factor for cryptosporidiosis among the immunocompetent population. These findings should be used to design larger studies of endemic cryptosporidiosis to elucidate the precise mechanisms of transmission, whether waterborne or other. PMID:12689343

  12. Physical factors determining the fraction of stored energy recoverable from hydrothermal convection systems and conduction-dominated areas

    USGS Publications Warehouse

    Nathenson, Manuel

    1975-01-01

    This report contains background analyses for the estimates of Nathenson and Muffler (1975) of geothermal resources in hydrothermal convection systems and conduction-dominated areas. The first section discusses heat and fluid recharge potential of geothermal reservoirs. The second section analyzes the physical factors that determine the fraction of stored energy obtainable at the surface from a geothermal reservoir. Conversion of heat to electricity and the use of geothermal energy for direct-heating applications are discussed in the last two sections. Nathenson, Manuel, and Muffler, L.J.P., 1975, Geothermal resources in hydrothermal convection systems and conduction dominated areas, in White, D.E., and Williams, D.L., eds., Assessment of the Geothermal Resources of the United States--1975: U.S. Geological Survey Circular 726, p. 104-121, available at http://pubs.er.usgs.gov/usgspubs/cir/cir726

  13. Patient factors influencing the concentration of stromal vascular fraction (SVF) for adipose-derived stromal cell (ASC) therapy in dogs.

    PubMed

    Astor, Donniel E; Hoelzler, Michael G; Harman, Robert; Bastian, Richard P

    2013-07-01

    The objective of this study was to determine whether patient factors influence the concentration of the stromal vascular fraction (SVF) in fat for adipose-derived stromal cell (ASC) therapy in dogs. A total of 1265 dogs underwent adipose collection surgeries by veterinarians for processing by the Vet-Stem laboratory and data on cell counts and patient factors were collected. Body condition score (BCS) and breed size did not significantly affect the viable cells per gram (VCPG) of adipose tissue that represents the viable SVF. Age significantly affected the VCPG, with dogs in age quartile 1 having a significantly higher VCPG than those in quartile 2 (P = 0.003) and quartile 4 (P = 0.002). Adipose tissue collected at the falciform location had significantly fewer VCPG than tissue collected at the thoracic wall and inguinal locations (P < 0.001). When the interaction of gender and location was evaluated, there were significantly fewer VCPG in tissue collected at the falciform location than at the thoracic wall and inguinal locations in female spayed dogs (P < 0.001) and male neutered dogs (P < 0.001), but not in female intact dogs (P = 0.743) or male intact dogs (P = 0.208). It was concluded that specific patient factors should be taken into consideration in order to obtain the maximal yield of VCPG from an adipose collection procedure.

  14. Effects of comprehensive function of factors on retention behavior of microparticles in gravitational field-flow fractionation.

    PubMed

    Guo, Shuang; Qiu, Bai-Ling; Zhu, Chen-Qi; Yang, Ya-Ya Gao; Wu, Di; Liang, Qi-Hui; Han, Nan-Yin

    2016-09-15

    Gravitational field-flow fractionation (GrFFF) is a useful technique for separation and characterization for micrometer-sized particles. Elution behavior of micrometer-sized particles in GrFFF was researched in this study. Particles in GrFFF channel are subject to hydrodynamic lift forces (HLF), fluid inertial forces and gravity, which drive them to different velocities by carrier flow, resulting in a size-based separation. Effects of ionic strength, flow rate and viscosity as well as methanol were investigated using polystyrene latex beads as model particles. This study is devoted to experimental verification of the effect of every factor and their comprehensive function. All experiments were performed to show isolated influence of every variable factor. The orthogonal design test was used to evaluate various factors comprehensively. Results suggested that retention ratio of particles increases with increasing flow rate or the viscosity of carrier liquid by adjusting external forces acting on particles. In addition, retention ratio increases as ionic strength decreases because of decreased electrostatic repulsion between particles and channel accumulation wall. As far as methanol, there is no general trend due to the change of both density and viscosity. On the basis of orthogonal design test it was found that viscosity of carrier liquid plays a significant role in determining resolution of micrometer-sized particles in GrFFF.

  15. Endogenous and environmental factors influence the dietary fractionation of 13C and 15N in hissing cockroaches Gromphadorhina portentosa.

    PubMed

    McCue, Marshall D

    2008-01-01

    Since DeNiro and Epstein's discovery that the (13)C and (15)N isotopic signatures of animals approximate those of their respective diets, the measurement of stable isotope signatures has become an important tool for ecologists studying the diets of wild animals. This study used Madagascar hissing cockroaches (Gromphadorhina portentosa) to examine several preexisting hypotheses about the relationship between the isotopic composition of an animal and its diet. Contrary to my predictions, the results revealed that the tissues of adult cockroaches raised for two generations on a diet of known isotopic composition did not demonstrate enrichment of heavy stable isotopes. Moreover, the (15)N signatures of cockroaches were neither influenced by periods of rapid growth (i.e., 300-fold increase in dry body mass over 120 d) nor by imposed periods of starvation lasting up to 80 d. The offspring born to mothers raised on known diets were enriched in (15)N. Diet-switching experiments showed that turnover times of (13)C were highly correlated with age and ranged from 9 to 10 d to 60 to 75 d in subadults and adults, respectively. Adults subjected to diet switches differed from the subadults in that the adults achieved equilibrated isotopic signatures that were shifted approximately 1.0 per thousand toward their respective original diets. Lipid fractions of adult cockroaches averaged 2.9 per thousand more depleted in (13)C than in lipid-free fractions, but no changes in (13)C were observed in aging adults. Exposure to reduced ambient temperature from 33 degrees C to 23 degrees C over 120 d did not influence isotopic signatures of tissues. Overall, the results of this study reveal that different endogenous and exogenous factors can influence the isotopic signatures of cockroaches. These findings reinforce the need to conduct controlled studies to further examine environmental factors that influence the relationships between the isotopic signatures of animals and their diets.

  16. Direct measurement of the boron isotope fractionation factor: Reducing the uncertainty in reconstructing ocean paleo-pH

    NASA Astrophysics Data System (ADS)

    Nir, Oded; Vengosh, Avner; Harkness, Jennifer S.; Dwyer, Gary S.; Lahav, Ori

    2015-03-01

    The boron isotopic composition of calcium carbonate skeletons is a promising proxy method for reconstructing paleo-ocean pH and atmospheric CO2 from the geological record. Although the boron isotope methodology has been used extensively over the past two decades to determine ancient ocean-pH, the actual value of the boron isotope fractionation factor (εB) between the two main dissolved boron species, 11B(OH)3 and 10B(OH)-4, has remained uncertain. Initially, εB values were theoretically computed from vibrational frequencies of boron species, resulting in a value of ∼ 19 ‰. Later, spectrophotometric pH measurements on artificial seawater suggested a higher value of ∼ 27 ‰. A few independent theoretical models also pointed to a higher εB value. Here we provide, for the first time, an independent empirical fractionation factor (εB = 26.0 ± 1.0 ‰ ; 25 °C), determined by direct measurements of B(OH)3 in seawater and other solutions. Boric acid was isolated by preferential passage through a reverse osmosis membrane under controlled pH conditions. We further demonstrate that applying the Pitzer ion-interaction approach, combined with ion-pairing calculations, results in a more accurate determination of species distribution in aquatic solutions of different chemical composition, relative to the traditional two-species boron-system approach. We show that using the revised approach reduces both the error in simulating ancient atmospheric CO2 (by up to 21%) and the overall uncertainty of applying boron isotopes for paleo-pH reconstruction. Combined, this revised methodology lays the foundation for a more accurate determination of ocean paleo-pH through time.

  17. Attached, unattached fraction of progeny concentrations and equilibrium factor for dose assessments from (222)Rn and (220)Rn.

    PubMed

    Singh, Parminder; Saini, Komal; Mishra, Rosaline; Sahoo, Bijay Kumar; Bajwa, Bikramjit Singh

    2016-08-01

    In this study, measurements of indoor radon ((222)Rn), thoron ((220)Rn) and their equilibrium equivalent concentration (EEC) were carried out in 96 dwellings from 22 different villages situated in Hamirpur district, Himachal Pradesh, India, by using LR-115 type II-based pinhole twin cup dosimeters and deposition-based progeny sensors (DRPS/DTPS). The annual average indoor (222)Rn and (220)Rn concentrations observed in these dwellings were 63.82 and 89.59 Bq/m(3), respectively, while the average EEC (attached + unattached) for (222)Rn and (220)Rn was 29.28 and 2.74 Bq/m(3). For (222)Rn (f Rn) and (220)Rn (f Tn), the average values of unattached fraction were 0.11 and 0.09, respectively. The equilibrium factors for radon (F Rn) and thoron (F Tn) varied from 0.12 to 0.77 with an average of 0.50, and from 0.01 to 0.34 with an average of 0.05, respectively. The annual inhalation dose due to mouth and nasal breathing was calculated using dose conversion factors and unattached fractions. The indoor annual effective doses for (222)Rn (AEDR) and (220)Rn (AEDT) were found to be 1.92 and 0.83 mSv a(-1), respectively. The values of (222)Rn/(220)Rn concentrations and annual effective doses obtained in the present study are within the safe limits as recommended by the International Commission on Radiological Protection for indoor dwelling exposure conditions.

  18. Simulating speleothem growth in the laboratory: Determination of stable isotope fractionation factors during precipitation of speleothem calcite

    NASA Astrophysics Data System (ADS)

    Hansen, Maximilian; Schöne, Bernd R.; Spötl, Christoph; Scholz, Denis

    2016-04-01

    We present laboratory experiments aiming to understand the processes affecting the δ13C and δ18O values of speleothems during precipitation of calcite from a thin layer of solution. In particular, we determined the precipitation rates and the isotope fractionation factors in dependence of several parameters, such as temperature, cave pCO2 and supersaturation with respect to calcite. The experiments were performed in a climate box in order to simulate cave conditions and to control them during the experiments[1]. In the experiments, a thin film of a CaCO3-CO2-H2O-solution supersaturated with respect to calcite flew down an inclined marble surface or a sand-blasted borosilicate glass plate, and the drip water was sampled at different distances and, thus, residence times on the plate. Subsequently, pH, electrical conductivity and the δ13C and δ18O values of the dissolved inorganic carbon (DIC) as well as the precipitated CaCO3 were determined. In addition, we determined the stable isotope values of the drip water and the atmosphere inside the box during the experiments. This enabled the identification of carbon and oxygen isotope fractionation factors between all carbonate species. The experiments were conducted at 10, 20 and 30 ° C, a pCO2 of 1000 and 3000 ppmV and with a Ca2+ concentration of 2 and 5 mmol/l. We observed an exponential decay of conductivity with increasing distance of flow documenting progressive precipitation of calcite confirming previous observations[2]. The corresponding time constants of precipitation range from 180 to 660 s. Both the δ13C and δ18O values show a progressive increase along the flow path. The enrichment of the δ13C values seems to be strongly influenced by kinetic isotope fractionation, whereas the δ18O values are in the range of isotopic equilibrium. The fractionation between the precipitated CaCO3 and DIC is between -1 and - 6.5 ‰ for carbon isotopes (13ɛ) and between -1.5 and -3 ‰ for oxygen isotopes (18ɛ). The

  19. Neglected role of hookah and opium in gastric carcinogenesis: a cohort study on risk factors and attributable fractions.

    PubMed

    Sadjadi, Alireza; Derakhshan, Mohammad H; Yazdanbod, Abbas; Boreiri, Majid; Parsaeian, Mahbubeh; Babaei, Masoud; Alimohammadian, Masoomeh; Samadi, Fatemeh; Etemadi, Arash; Pourfarzi, Farhad; Ahmadi, Emad; Delavari, Alireza; Islami, Farhad; Farzadfar, Farshad; Sotoudeh, Masoud; Nikmanesh, Arash; Alizadeh, Behrooz Z; de Bock, Geertruida H; Malekzadeh, Reza

    2014-01-01

    A recent study showed an association between hookah/opium use and gastric cancer but no study has investigated the relationship with gastric precancerous lesions. We examined the association between hookah/opium and gastric precancerous lesions and subsequent gastric cancer. In a population-based cohort study, 928 randomly selected, healthy, Helicobacter pylori-infected subjects in Ardabil Province, Iran, were followed for 10 years. The association between baseline precancerous lesions and lifestyle risk factors (including hookah/opium) was analyzed using logistic regression and presented as odds ratios (ORs) and 95% confidence intervals (CIs). We also calculated hazard ratios (HRs) and 95% CIs for the associations of lifestyle risk factors and endoscopic and histological parameters with incident gastric cancers using Cox regression models. Additionally, the proportion of cancers attributable to modifiable risk factors was calculated. During 9,096 person-years of follow-up, 36 new cases of gastric cancer were observed (incidence rate: 3.96/1,000 persons-years). Opium consumption was strongly associated with baseline antral (OR: 3.2; 95% CI: 1.2-9.1) and body intestinal metaplasia (OR: 7.3; 95% CI: 2.5-21.5). Opium (HR: 3.2; 95% CI: 1.4-7.7), hookah (HR: 3.4; 95% CI: 1.7-7.1) and cigarette use (HR: 3.2; 95% CI: 1.4-7.5), as well as high salt intake, family history of gastric cancer, gastric ulcer and histological atrophic gastritis and intestinal metaplasia of body were associated with higher risk of gastric cancer. The fraction of cancers attributable jointly to high salt, low fruit intake, smoking (including hookah) and opium was 93% (95% CI: 83-98). Hookah and opium use are risk factors for gastric cancer as well as for precancerous lesions. Hookah, opium, cigarette and high salt intake are important modifiable risk factors in this high-incidence gastric cancer area.

  20. Restoration Lessons Learned from Bay Scallop Habitat Models

    EPA Science Inventory

    Habitat quality and quantity are important factors to consider when restoring bay scallop (Argopecten irradians) populations; however, data linking habitat attributes to bay scallop populations are lacking. This information is essential to guide restoration efforts to reverse sc...

  1. Factors affecting recall rate and false positive fraction in breast cancer screening with breast tomosynthesis - A statistical approach.

    PubMed

    Rosso, Aldana; Lång, Kristina; Petersson, Ingemar F; Zackrisson, Sophia

    2015-10-01

    In this study, we investigate which factors affect the false positive fraction (FPF) for digital breast tomosynthesis (DBT) compared to digital mammography (DM) in a screening population by using classification and regression trees (C&RT) and binary marginal generalized linear models. The data was obtained from the Malmö Breast Tomosynthesis Screening Trial, which aimed to compare the performance of DBT to DM in breast cancer screening. By using data from the first half of the study population (7500 women), a tree with the recall probability for different groups was calculated. The effect of age and breast density on the FPF was estimated using a binary marginal generalized linear model. Our results show that breast density and breast cancer were the main factors influencing recall. The FPF is mainly affected by breast density and increases with breast density for DBT and DM. In conclusion, the results obtained with C&RT are easy to interpret and similar to those obtained using binary marginal generalized linear models. The FPF is approximately 40% higher for DBT compared to DM for all breast density categories.

  2. An intuitive approach to understanding the attributable fraction of disease due to a risk factor: the case of smoking.

    PubMed

    Rosen, Laura

    2013-07-16

    The health damage from tobacco use has been studied intensively, yet quantifying the precise burden of disease and death due to smoking is a complex problem, and consequently open to manipulation by interested parties. The goals of this paper are to clearly communicate the concept of the attributable fraction (AF), i.e., the proportion of disease in a population which can be attributed to a risk factor, and to understand the relationship between the AF, the prevalence of exposure in a population, and the relative risk of disease given the exposure. The current approach to calculating the AF is summarized. An intuitive formula is proposed, with accompanying graphical illumination. For diseases caused by smoking, the AF of disease due to smoking increases with the prevalence of smoking and with the relative risk of disease due to smoking. The proposed method has the potential to help health professionals and decision makers understand the concept of the burden of disease due to smoking or other lifestyle, environmental, and occupational factors, in the context of public health importance. This will aid sound decision-making in public health policy.

  3. Unwinding protein specific for mRNA translation fractionated together with rabbit reticulocyte initiation factor 3 complex

    PubMed Central

    Ilan, Joseph; Ilan, Judith

    1977-01-01

    Experiments with a rabbit reticulocyte cell-free system dependent on the addition of initiation factor 3 (eIF-3) and mRNA were carried out. In this system, using ribosomal subunits, AUG(U)n can direct polyphenylalanine synthesis in the absence of eIF-3 at 3 mM MgCl2. Globin mRNA was not translated under similar conditions; its translation requires the addition of eIF-3. Moreover, the maximal rate of globin synthesis was achieved when the molar ratio of eIF-3 to ribosomes was approximately 1. This was taken to indicate that some ribosomal proteins were fractionated with eIF-3 and functioned in reconstitution of salt-washed ribosomes. In our system, almost all ribosomes were active, as evident from the fact that all were found in polysomes when analyzed at the time of linear incorporation, and the molar ratio of ribosomes to mRNA was maintained at 4:1. When AUG(U)n was hybridized with poly(A), it could not direct polyphenylalanine synthesis with or without eIF-3 and was a potent inhibitor of the translation of globin mRNA in the presence of eIF-3. When poly(A) containing 10% U was hybridized with AUG(U)n and added to the cell-free system, addition of eIF-3 promoted polyphenylalanine synthesis to about 80% of control. Moreover, eIF-3 was seen to shift significantly the melting temperature of globin and synthetic double-stranded RNA. These observations suggest that extraction of ribosomes with 0.5 M KCl may release a ribosomal protein that fractionates with eIF-3. This protein may function in unwinding or melting the secondary structure of mRNA and thus facilitate translation. PMID:267926

  4. Galveston Bay

    USGS Publications Warehouse

    Handley, Lawrence R.; Spear, Kathryn A.; Eleonor Taylor,; Thatcher, Cindy

    2011-01-01

    The Galveston Bay estuary is located on the upper Texas Gulf coast (Lester and Gonzalez, 2002). It is composed of four major sub-bays—Galveston, Trinity, East, and West Bays. It is Texas’ largest estuary on the Gulf Coast with a total area of 155,399 hectares (384,000 acres) and 1,885 km (1,171 miles) of shoreline (Burgan and Engle, 2006). The volume of the bay has increased over the past 50 years due to subsidence, dredging, and sea level rise. Outside of ship channels, the maximum depth is only 3.7 m (12 ft), with the average depth ranging from 1.2 m (4 ft) to 2.4 m (8 ft)— even shallower in areas with widespread oyster reefs (Lester and Gonzalez, 2002). The tidal range is less than 0.9 m (3 ft), but water levels and circulation are highly influenced by wind. The estuary was formed in a drowned river delta, and its bayous were once channels of the Brazos and Trinity Rivers. Today, the watersheds surrounding the Trinity and San Jacinto Rivers, along with many other smaller bayous, feed into the bay. The entire Galveston Bay watershed is 85,470 km2 (33,000 miles2 ) large (Figure 1). Galveston Island, a 5,000 year old sand bar that lies at the western edge of the bay’s opening into the Gulf of Mexico, impedes the freshwater flow of the Trinity and San Jacinto Rivers into the Gulf, the majority of which comes from the Trinity. The Bolivar Peninsula lies at the eastern edge of the bay’s opening into the Gulf. Water flows into the Gulf at Bolivar Roads, 1 U.S. Geological Survey National Wetlands Research Center, 700 Cajundome Blvd., Lafayette, LA 70506 2 Harte Research Institute for Gulf of Mexico Studies, Texas A&M University - Corpus Christi, 6300 Ocean Drive, Unit 5869, Corpus Christi, Texas 78412 2 Galveston Pass, between Galveston Island and Bolivar Peninsula, and at San Luis Pass, between the western side of Galveston Island and Follets Island.

  5. Antifungal relative inhibition factors: BAY l-9139, bifonazole, butoconazole, isoconazole, itraconazole (R 51211), oxiconazole, Ro 14-4767/002, sulconazole, terconazole and vibunazole (BAY n-7133) compared in vitro with nine established antifungal agents.

    PubMed

    Odds, F C; Webster, C E; Abbott, A B

    1984-08-01

    Nine new antifungal agents were tested for their activity in vitro in terms of relative inhibition factors (RIFs) against 26 isolates of Candida species, eight isolates of Aspergillus species and six isolates of dermatophyte fungi. Eight of the new compounds were azole antifungals, the ninth was a phenylmorpholine derivative. Against Candida species, all the novel compounds gave RIFs that were of a similar order to RIFs for established imidazole compounds. Two topical antifungals, butoconazole and terconazole, and two systemic antifungals, itraconazole and vibunazole, gave mean RIFs less than 60% in tests with Candida species, and therefore matched clotrimazole, ketoconazole and tioconazole in terms of RIF. However, none of the new compounds gave RIFs as low as amphotericin B against the Candida isolates. Against Aspergillus isolates, itraconazole, with a mean RIF of 25%, was even more active in vitro than amphotericin B. Vibunazole was as active as ketoconazole against Aspergillus isolates. All the new antifungals except Bay l-9139 gave very low RIFs against dermatophyte isolates, and thus matched established imidazole antifungals for inhibitory effects in vitro. In terms of RIF data, all the nine new compounds tested appear to offer reasonable potential for antifungal chemotherapy in vivo. A similar conclusion would not have been drawn from minimal inhibitory concentration data, which tended to show most of the new antifungals in a very poor light. Tests with amphotericin B, 5-fluorocytosine and ketoconazole showed that RIF can vary substantially with the pH of the test medium. For amphotericin B and ketoconazole the best activity was seen at neutral pH values; for 5-fluorocytosine the greatest inhibitory activity was found at lower pH values.

  6. Tempered fractional calculus

    SciTech Connect

    Sabzikar, Farzad; Meerschaert, Mark M.; Chen, Jinghua

    2015-07-15

    Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered fractional difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series.

  7. Ca isotope stratigraphy across the Cenomanian-Turonian OAE 2: Links between volcanism, seawater geochemistry, and the carbonate fractionation factor

    NASA Astrophysics Data System (ADS)

    Du Vivier, Alice D. C.; Jacobson, Andrew D.; Lehn, Gregory O.; Selby, David; Hurtgen, Matthew T.; Sageman, Bradley B.

    2015-04-01

    The Ca isotope composition of marine carbonate rocks offers potential to reconstruct drivers of environmental change in the geologic past. This study reports new, high-precision Ca isotope records (δ44/40Ca; 2σSD = ± 0.04 ‰) for three sections spanning a major perturbation to the Cretaceous ocean-climate system known as Ocean Anoxic Event 2 (OAE 2): central Colorado, USA (Portland #1 core), southeastern France (Pont d'Issole), and Hokkaido, Japan (Oyubari, Yezo Group). In addition, we generated new data for selected samples from Eastbourne, England (English Chalk), where a previous Ca isotope study was completed using different methodology (Blättler et al., 2011). Strata of the Yezo Group contain little carbonate (∼1 wt.% on average) and accordingly did not yield a clear δ44/40Ca signal. The Portland core and the Pont d'Issole section display comparable δ44/40Ca values, which increase by ∼ 0.10- 0.15 ‰ at the onset of OAE 2 and then decrease to near-initial values across the event. The Eastbourne δ44/40Ca values are higher than previously reported. They are also higher than the δ44/40Ca values for the Portland core and the Pont d'Issole section but define a similar pattern. According to a numerical model of the marine Ca cycle, elevated hydrothermal inputs have little impact on seawater δ44/40Ca values. Elevated riverine (chemical weathering) inputs produce a transient negative isotope excursion, which significantly differs from the positive isotope excursions observed in the Portland, Pont d'Issole, and Eastbourne records. A decrease in the magnitude of the carbonate fractionation factor provides the best explanation for a positive shift in δ44/40Ca values, especially given the rapid nature of the excursion. Because a decrease in the fractionation factor corresponds to an increase in the Ca/CO3 ratio of seawater, we tentatively attribute the positive Ca isotope excursion to transient ocean acidification, i.e., a reduction in the concentration of

  8. Stability of reef framework and post settlement mortality as the structuring factor for recovery of Malakal Bay Reef, Palau, Micronesia: 25 years after a severe COTS outbreak

    NASA Astrophysics Data System (ADS)

    Victor, Steven

    2008-03-01

    Corals in Malakal Bay reefs were devastated in the 1979 Crown of Thorns Starfish (COTS) outbreak. It has been almost 30 years since the outbreak and coral cover at the study sites have not come close to the cover before the outbreak. A question is asked: what factors may contribute to the slow recovery of these reefs: recruitment or post-settlement mortality? Two habitat types within the reef systems were monitored using coral transplants to determine if corals can survive in these environments and recruitment tiles to see if there are larvae coming into the system. The study revealed that coral survivorship is high in the fore reef areas compared to the reef channel slopes and that larvae is not a limiting factor to natural recovery. Stability of the reef framework, i.e. unstable rubble substrate, and possibly high post settlement mortality, are the structuring factors that determine the recovery process in these reef systems and possibly so for similar habitats in other reef systems throughout Palau.

  9. Source identification of different size fraction of PM10 using factor analysis at residential cum commercial area of Nagpur city.

    PubMed

    Pipalatkar, P P; Gajghate, D G; Khaparde, V V

    2012-02-01

    Particulate size distribution of PM(10) and associated trace metal concentrations has been carried out in residential cum commercial area of Mahal at Nagpur city. Sampling for size fraction of particulate matter was performed during winter season using eight-stage cascade impactor with a pre-separator and toxic metals were analyzed using inductively coupled plasma-optical emission spectroscopy (ICP-OES). The average concentration of PM(10) and fine particulate matter (effective cut of aerodynamic diameter ≤2.2 μm) was found to be 300 and 136.7 μg/m(3), respectively which was exceeding limit of Central Pollution Control Board. Maximum mass concentration of 41 μg/m(3) in size range of 9.0-10.0 μm and minimum mass concentration of 19 μg/m(3) in size range 2.2-3.3 μm was observed. Metals (Sr, Ni and Zn) were found to large proportions in below 0.7 μm particle size and could therefore pass directly into the alveoli region of human respiratory system. Factor analysis results indicated combustion and vehicular emission as the dominant source in fine mode and resuspended dust was dominant in medium mode while crustal along with vehicular source was major in coarse mode of particulate matter.

  10. Dynamic changes of carbon isotope apparent fractionation factor to describe transition to syntrophic acetate oxidation during cellulose and acetate methanization.

    PubMed

    Vavilin, Vasily A; Rytov, Sergey V

    2017-05-01

    To identify predominant metabolic pathway for cellulose methanization new equations that take into account dynamics of 13C are added to the basic model of cellulose methanization. The correct stoichiometry of hydrolysis, acidogenesis, acetogenesis and methanogenesis steps including biomass is considered. Using experimental data by Laukenmann et al. [Identification of methanogenic pathway in anaerobic digesters using stable carbon isotopes. Eng. Life Sci. 2010;10:1-6], who reported about the importance of ace`tate oxidation during mesophilic cellulose methanization, the model confirmed that, at high biomass concentration of acetate oxidizers, the carbon isotope fractionation factor amounts to about 1.085. The same model, suggested firstly for cellulose degradation, was used to describe, secondly, changes in, and in methane and carbon dioxide during mesophylic acetate methanization measured by Grossin-Debattista [Fractionnements isotopiques (13C/12C) engendres par la methanogenese: apports pour la comprehension des processus de biodegradation lors de la digestion anaerobie [doctoral thesis]. 2011. Bordeaux: Universite Bordeaux-1;2011. Available from: http://ori-oai.u-bordeaux1.fr/pdf/2011/GROSSIN-DEBATTISTA_JULIEN_2011.pdf . French].The model showed that under various ammonium concentrations, at dominating acetoclastic methanogenesis, the value decreases over time to a low level (1.016), while at dominating syntrophic acetate oxidation, coupled with hydrogenotrophic methanogenesis, slightly increases, reaching 1.060 at the end of incubation.

  11. Weak acid extractable metals in Bramble Bay, Queensland, Australia: temporal behaviour, enrichment and source apportionment.

    PubMed

    Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

    2015-02-15

    Sediment samples were taken from six sampling sites in Bramble Bay, Queensland, Australia between February and November in 2012. They were analysed for a range of heavy metals including Al, Fe, Mn, Ti, Ce, Th, U, V, Cr, Co, Ni, Cu, Zn, As, Cd, Sb, Te, Hg, Tl and Pb. Fraction analysis, Enrichment Factors and Principal Component Analysis-Absolute Principal Component Scores (PCA-APCS) were carried out in order to assess metal pollution, potential bioavailability and source apportionment. Cr and Ni exceeded the Australian Interim Sediment Quality Guidelines at some sampling sites, while Hg was found to be the most enriched metal. Fraction analysis identified increased weak acid soluble Hg and Cd during the sampling period. Source apportionment via PCA-APCS found four sources of metals pollution, namely, marine sediments, shipping, antifouling coatings and a mixed source. These sources need to be considered in any metal pollution control measure within Bramble Bay.

  12. TEMPERED FRACTIONAL CALCULUS

    PubMed Central

    MEERSCHAERT, MARK M.; SABZIKAR, FARZAD; CHEN, JINGHUA

    2014-01-01

    Fractional derivatives and integrals are convolutions with a power law. Multiplying by an exponential factor leads to tempered fractional derivatives and integrals. Tempered fractional diffusion equations, where the usual second derivative in space is replaced by a tempered fractional derivative, govern the limits of random walk models with an exponentially tempered power law jump distribution. The limiting tempered stable probability densities exhibit semi-heavy tails, which are commonly observed in finance. Tempered power law waiting times lead to tempered fractional time derivatives, which have proven useful in geophysics. The tempered fractional derivative or integral of a Brownian motion, called a tempered fractional Brownian motion, can exhibit semi-long range dependence. The increments of this process, called tempered fractional Gaussian noise, provide a useful new stochastic model for wind speed data. A tempered difference forms the basis for numerical methods to solve tempered fractional diffusion equations, and it also provides a useful new correlation model in time series. PMID:26085690

  13. [Effects of environmental factors on β diversity of zooplankton community in thermal discharge seawaters near Guohua Power Plant in Xiangshan Bay, Zhejiang, China].

    PubMed

    Zhu, Yi-feng; Dai, Mei-xia; Zhou, Xiao-hong; Lin, Xia; Mao, Shuo-qian; Yan, Xiao-jun

    2015-08-01

    Zooplankton samples were seasonally collected at 10 stations in thermal discharge seawaters near Guohua Power Plant in Xiangshan Bay. The abundance data from these samples were pooled and further combined with field environmental factors, then generalised dissimilarity modelling (GDM) was used to explore the effects of environmental factors on β diversity of zooplankton community. The results showed that altogether 95 species of zooplankton belonging to 14 taxa were found. In these taxa, small zooplankton with 62.6% of abundance was the main taxa, while copepods dominated in adult groups, which abundance accounted for 35.3%. According to Whittaker's definition and additive partition, a diversity accounted for 36.3% and β diversity 63.7%. Environmental factors explained 43.8% of β diversity, and geographical distance between sampling sites had no effect on β diversity. However, there were still 19.9% of β diversity remained to be explained. After GDM fitting, there were nine environmental variables affecting zooplankton β diversity and explaining 68.8% of β diversity. The variables contributing to β diversity from high to low were seasonal water temperature, dissolved oxygen, seawater temperature increment, conductivity, suspended particulate matter, salinity, transparency, water depth and redox potential, respectively. Seasonal water temperature, dissolved oxygen and seawater temperature increment were the most important factors for driving β diversity changes, and accounted for 23.9%, 13.7% and 9.7% of absolute contribution to the interpretable portion of the β diversity, respectively. When seasonal water temperature, dissolved oxygen and seawater temperature increment were below 25 °C, greater than 5 mg · L(-1) and over 1 °C, respectively, β diversity rapidly increased with the increasing variable gradients. Furthermore, other predictors had little effect on β diversity.

  14. Examination of factors dominating the sediment-water diffusion flux of DDT-related compounds measured by passive sampling in an urbanized estuarine bay.

    PubMed

    Feng, Yan; Wu, Chen-Chou; Bao, Lian-Jun; Shi, Lei; Song, Lin; Zeng, Eddy Y

    2016-12-01

    The fate of hydrophobic organic compounds in aquatic environment are largely determined by their exchange at sediment-water interface, which is highly dynamic and subject to rapidly evolving environmental conditions. In turn, environmental conditions may be governed by both physicochemical parameters and anthropogenic events. To examine the importance of various impact factors, passive sampling devices were deployed at the seafloor of Hailing Bay, an urbanized estuarine bay in Guangdong Province of South China to measure the sediment-water diffusion fluxes of several metabolites of dichlorodiphenyltrichloroethane (DDT), p,p'-DDE, p,p'-DDD and o,p'-DDD. The physicochemical properties of water (temperature, pH, salinity and dissolved oxygen) and surface sediment (sediment organic matter, physical composition, pH, water content, colony forming unit and catalase activity) were also measured. The results showed that the diffusion fluxes of o,p'-DDD, p,p'-DDD and p,p'-DDE at sites A1 and A2 near a fishing boat maintenance facility ranged from 0.42 to 4.73 ng m(-2) d(-1) (from sediment to overlying water), whereas those at offshore sites varied between -0.03 and -3.02 ng m(-2) d(-1) (from overlying water to sediment), implicating A1 and A2 as the sources of the target compounds. The distribution patterns of the diffusion fluxes of the target compounds were different from those of water and sediment parameters (water temperature, salinity, sediment texture, pH, colony forming unit and catalase activity) at six sampling sites. This finding suggested that none of these parameters were critical in dictating the sediment-water diffusion fluxes. Besides, decreases in the contents of kerogen and black carbon by 6.7% and 11% would enhance the diffusion fluxes of the target compounds by 11-14% and 12-23%, respectively, at site A1, indicating that kerogen and black carbon were the key factors in mediating the sediment-water diffusion fluxes of DDT-related compounds in field

  15. Isotopic fractionation factor and hydrogenic potential in 2-hydroxy-1,1,1,5,5,5-hexafluoro-2-penten-4-one

    SciTech Connect

    Kreevoy, M.M.; Ridl, B.A.

    1981-04-02

    The title compound (enol-hexafluoroacetylacetone) has an isotopic fractionation factor of 0.6 +- 0.1. This, and much other information about this compound, can be rationalized if the enolic hydrogen bridges between the two oxygens and is governed by a double minimum potential function with a central maximum of approx. 3000 cm/sup -1/ (8 kcal/mol)(eq 10).

  16. A novel animal model to investigate fractionated radiotherapy-induced alimentary mucositis: the role of apoptosis, p53, nuclear factor-kappaB, COX-1, and COX-2.

    PubMed

    Yeoh, Ann S J; Gibson, Rachel J; Yeoh, Eric E K; Bowen, Joanne M; Stringer, Andrea M; Giam, Kar A; Keefe, Dorothy M K

    2007-08-01

    Radiation-induced mucositis is a common and serious side effect of radiotherapy. Molecular mechanisms of mucosal injury, however, are still poorly understood and extremely difficult to study in humans. A novel Dark Agouti rat model using fractionated radiotherapy to induce mucositis has been developed to investigate the occurrence of alimentary mucosal injury. Twenty-four Dark Agouti rats were randomly assigned to receive either fractionated radiotherapy or no radiotherapy. The irradiated rats received a fractionated course of abdominal radiotherapy at 45 Gy/18 fractions/6 weeks treating thrice weekly (i.e., at a radiation dose of 2.5 Gy per fraction). After each week of radiation, a group of irradiated rats was killed. Histomorphology and mucin distribution in the alimentary tract was investigated. The terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling assay was used to examine apoptosis in the colon and jejunum, and intestinal morphometry was used to assess villus length, crypt length, and mitotic crypt count. Immunohistochemistry of p53, nuclear factor-kappaB, cyclooxygenase (COX)-1, and COX-2 was also done. The fractionated radiotherapy course induced alimentary mucositis from week 1, with more severe injury seen in the small intestine. The hallmark appearance of apoptosis was present in the crypts of the small and large intestine. In the jejunum and colon, goblet cell disorganization and degeneration was obvious and crypt mitotic counts were severely depleted throughout the treatment. Expression of p53, nuclear factor-kappaB, COX-1, and COX-2 was increased in the irradiated intestinal sections. Fractionated radiation-induced alimentary mucositis has been effectively documented in the Dark Agouti rat for the first time. Further studies investigating the molecular mechanisms underlying radiation-induced mucositis are planned to ultimately achieve anti-mucotoxic-targeted therapies.

  17. Non-O1/non-O139 Vibrio cholerae carrying multiple virulence factors and V. cholerae O1 in the Chesapeake Bay, Maryland.

    PubMed

    Ceccarelli, Daniela; Chen, Arlene; Hasan, Nur A; Rashed, Shah M; Huq, Anwar; Colwell, Rita R

    2015-03-01

    Non-O1/non-O139 Vibrio cholerae inhabits estuarine and coastal waters globally, but its clinical significance has not been sufficiently investigated, despite the fact that it has been associated with septicemia and gastroenteritis. The emergence of virulent non-O1/non-O139 V. cholerae is consistent with the recognition of new pathogenic variants worldwide. Oyster, sediment, and water samples were collected during a vibrio surveillance program carried out from 2009 to 2012 in the Chesapeake Bay, Maryland. V. cholerae O1 was detected by a direct fluorescent-antibody (DFA) assay but was not successfully cultured, whereas 395 isolates of non-O1/non-O139 V. cholerae were confirmed by multiplex PCR and serology. Only a few of the non-O1/non-O139 V. cholerae isolates were resistant to ampicillin and/or penicillin. Most of the isolates were sensitive to all antibiotics tested, and 77 to 90% carried the El Tor variant hemolysin gene hlyAET, the actin cross-linking repeats in toxin gene rtxA, the hemagglutinin protease gene hap, and the type 6 secretion system. About 19 to 21% of the isolates carried the neuraminidase-encoding gene nanH and/or the heat-stable toxin (NAG-ST), and only 5% contained a type 3 secretion system. None of the non-O1/non-O139 V. cholerae isolates contained Vibrio pathogenicity island-associated genes. However, ctxA, ace, or zot was present in nine isolates. Fifty-five different genotypes showed up to 12 virulence factors, independent of the source of isolation, and represent the first report of both antibiotic susceptibility and virulence associated with non-O1/non-O139 V. cholerae from the Chesapeake Bay. Since these results confirm the presence of potentially pathogenic non-O1/non-O139 V. cholerae, monitoring for total V. cholerae, regardless of serotype, should be done within the context of public health.

  18. Tsunami Inundation modeling for Tolaga Bay, Tokomaru Bay, Hicks Bay and Te Araroa communities

    NASA Astrophysics Data System (ADS)

    Barberopoulou, A.; Wang, X.; Power, W. L.

    2012-12-01

    South America events with a flooding area of approximately 10km2. There is great variability among the different bays for some of the tsunami scenarios. For example, during the South America event Tolaga Bay is expected to experience severe flooding that covers an area of nearly 10 km2 while for Hicks Bay and Te Araroa it is about 8 km2 and only about 1km2 for Tokomaru Bay. It is important to note that flooding occurs more than once over the course of the tsunami scenarios and large inundation usually is associated with later arrivals. This is an important observation that is not unique to New Zealand and Gisborne District in particular, although the specifics of which wave is responsible for the largest flooding depends on the source, location of the bay and local bathymetric features among other factors. Probably the most striking event in this study is the distant Peru event because it is apparent that low-lying areas are flooded about 6 times during the 24 hours of the simulation and the 4th wave is the one that causes the greatest inundation. The same is not true over all events and local events will have shorter duration with the time in-between wave arrivals being shorter due to the proximity of the source location.

  19. PCDD/F, PCB, HXCBZ, PAH, AND PM EMISSION FACTORS FOR FIREPLACE AND WOODSTOVE COMBUSTION IN THE SAN FRANCISCO BAY REGION

    EPA Science Inventory

    Emissions from residential fireplace and woodstove appliances burning fuels available from the San Francisco Bay area were sampled for polychlornated dibenzodioxins and dibenzofurans (PCDDs/Fs), polychlorinated biphenyls (PCBs), hexachlorobenzene (HxCBz), particulate
    matter (P...

  20. Controlling factors of Ca isotope fractionation in scleractinian corals evaluated by temperature, pH and light controlled culture experiments

    NASA Astrophysics Data System (ADS)

    Inoue, Mayuri; Gussone, Nikolaus; Koga, Yasuko; Iwase, Akihiro; Suzuki, Atsushi; Sakai, Kazuhiko; Kawahata, Hodaka

    2015-10-01

    In this study, the 44Ca/40Ca ratios of Porites australiensis grown under three different culture experiments composed of temperature, pH and light controlled culture experiments are measured. The temperature dependent isotope fractionation of 0.02‰/°C deduced from this study is similar to inorganic aragonite, but the degree of isotope fractionation is about +0.4‰ offset in corals. These observations agree with earlier results on different coral species, suggesting Ca isotope fractionation during Ca transmembrane transport in corals. While in cultured corals a significant temperature dependence of δ44Ca is observed, the relationships between calcium isotope fractionation and pH as well as light intensity are negligible. Therefore variation of δ44Ca in Porites corals is mainly controlled by temperature. A combination of δ44Ca and Sr/Ca of corals in temperature controlled experiments cannot be explained by Rayleigh type fractionation directly from a fluid, which is seawater-like in terms of δ44Ca and Sr/Ca. Through coral-specific biomineralization processes, overall mean δ44Ca of scleractinian corals including previous studies are different from biogenic aragonites secreted by sclerosponges and pteropods, but are comparable with those of bivalves as well as calcitic coccolithophores and foraminifers. These findings are important for better understanding biomineralization in corals and in order to constrain the Ca isotopic composition of oceanic Ca sinks in response to climate changes and associated with shifts of calcite and aragonite seas.

  1. Biochemical assessment of growth factors and circulation of blood components contained in the different fractions obtained by centrifugation of venous blood.

    PubMed

    Corigiano, M; Ciobanu, G; Baldoni, E; Pompa, G

    2014-01-01

    The aim of this study was to evaluate a biochemical marker with different elements of a normal blood serum and centrifuged blood serum after a different rotation system. For this technique, we used five fractions of a blood Concentrated Growth Factors system (bCGF) and a particular device for the different rotation program. Blood samples were collected from 10 volunteers aged between 35 and 55 in the Operative Unit of the “Sapienza” University of Rome with only a fraction of different biochemical elements. Through an individual blood phase separator tube of venous blood, active factions of serum and 4 fractions of red buffy coat were taken. The biochemical markers with 14 elements were examined at times: P1-11 minutes, P2-12minutes, P3-15 minutes. Exclusively biological materials which are normally applied in the regeneration techniques for different defects and lesions were used with this technique. After specific rotation programs, a different result was obtained for each cycle: P1, P2, P3. In test tubes obtained by separated blood, we observed a higher concentration of proteins, ions, and other antigens compared to normal blood plasma. Examining the biochemical results of different elements, we observed an increase (P≤0,01). Since each person’s DNA is different, we could not have the same results in 5 fractions of blood concentration, we did, however, find a good increase in only a fraction of proteins, immunoglobulin and different ions. We obtained five fractions after centrifugation, and we had an increase in different biochemical elements compared to normal blood (P≤0,01) which is significant at different times. These biochemical elements were stimulated by different growth factors, which are used by the immune system, and they induced the formation of hard and soft tissues and good regeneration.

  2. Gradient Analysis and Classification of Carolina Bay Vegetation: A Framework for Bay Wetlands Conservation and Restoration

    SciTech Connect

    Diane De Steven,Ph.D.; Maureen Tone,PhD.

    1997-10-01

    This report address four project objectives: (1) Gradient model of Carolina bay vegetation on the SRS--The authors use ordination analyses to identify environmental and landscape factors that are correlated with vegetation composition. Significant factors can provide a framework for site-based conservation of existing diversity, and they may also be useful site predictors for potential vegetation in bay restorations. (2) Regional analysis of Carolina bay vegetation diversity--They expand the ordination analyses to assess the degree to which SRS bays encompass the range of vegetation diversity found in the regional landscape of South Carolina's western Upper Coastal Plain. Such comparisons can indicate floristic status relative to regional potentials and identify missing species or community elements that might be re-introduced or restored. (3) Classification of vegetation communities in Upper Coastal Plain bays--They use cluster analysis to identify plant community-types at the regional scale, and explore how this classification may be functional with respect to significant environmental and landscape factors. An environmentally-based classification at the whole-bay level can provide a system of templates for managing bays as individual units and for restoring bays to desired plant communities. (4) Qualitative model for bay vegetation dynamics--They analyze present-day vegetation in relation to historic land uses and disturbances. The distinctive history of SRS bays provides the possibility of assessing pathways of post-disturbance succession. They attempt to develop a coarse-scale model of vegetation shifts in response to changing site factors; such qualitative models can provide a basis for suggesting management interventions that may be needed to maintain desired vegetation in protected or restored bays.

  3. Towards A Modern Calibration Of The 238U/235U Paleoredox Proxy: Apparent Uranium Isotope Fractionation Factor During U(VI)-U(IV) Reduction In The Black Sea

    NASA Astrophysics Data System (ADS)

    Rolison, J. M.; Stirling, C. H.; Middag, R.; Rijkenberg, M. J. A.; De Baar, H. J. W.

    2015-12-01

    The isotopic compositions of redox-sensitive metals, including uranium (U), in marine sediments have recently emerged as powerful diagnostic tracers of the redox state of the ancient ocean-atmosphere system. Interpretation of sedimentary isotopic information requires a thorough understating of the environmental controls on isotopic fractionation in modern anoxic environments before being applied to the paleo-record. In this study, the relationship between ocean anoxia and the isotopic fractionation of U was investigated in the water column and sediments of the Black Sea. The Black Sea is the world's largest anoxic basin and significant removal of U from the water column and high U accumulation rates in modern underlying sediments have been documented. Removal of U from the water column occurs during the redox transition of soluble U(VI) to relatively insoluble U(IV). The primary results of this study are two-fold. First, significant 238U/235U fractionation was observed in the water column of the Black Sea, suggesting the reduction of U induces 238U/235U fractionation with the preferential removal of 238U from the aqueous phase. Second, the 238U/235U of underlying sediments is related to the water column through the isotope fractionation factor of the reduction reaction but is influenced by mass transport processes. These results provide important constraints on the use of 238U/235U as a proxy of the redox state of ancient oceans.

  4. Equilibrium Iron Isotope Fractionation Factors of Minerals: Reevaluation from the Data of Nuclear Inelastic Resonant X-ray Scattering and Mossbauer Spectroscopy

    SciTech Connect

    Polyakov, Dr. V. B.; Clayton, R. N.; Horita, Juske; Mineev, S. D.

    2007-01-01

    We have critically reevaluated equilibrium iron isotope fractionation factors for oxide and sulfide minerals using recently acquired data obtained by Moessbauer spectroscopy and inelastic nuclear resonant X-ray scattering (INRXS) synchrotron radiation. Good agreement was observed in the iron {beta}-factors of metallic iron ({alpha}-Fe) and hematite calculated using both Moessbauer- and INRXS-derived data, which supports the validity and reliability of the calculations. Based on this excellent agreement, we suggest the use of the present data on the iron {beta}-factors of hematite as a reference. The previous Moessbauer-derived iron {beta}-factor for magnetite has been modified significantly based on the Fe-sublattice density of states obtained from the INRXS experiments. This resolves the disagreement between naturally observed iron isotope fractionation factors for mineral pairs involving magnetite and those obtained from the calculated {beta}-factors. The correctness of iron {beta}-factor for pyrite has been corroborated by the good agreement with experimental data of sulfur isotope geothermometers of pyrite-galena and pyrite-sphalerite. A good correlation between the potential energy of the cation site, the oxidation state of iron and the iron {beta}-factor value has been established. Specifically, ferric compounds, which have a higher potential energy of iron than ferrous compounds, have higher {beta}-factors. A similar dependence of b-factors on the oxidation state and potential energy could be extended to other transition metals. Extremely low values of INRXS-derived iron {beta}-factors for troilite and Fe{sub 3}S significantly widen the range of iron b-factors for covalently bonded compounds.

  5. A high-resolution peak fractionation approach for streamlined screening of nuclear-factor-E2-related factor-2 activators in Salvia miltiorrhiza.

    PubMed

    Zhang, Hui; Luo, Li-Ping; Song, Hui-Peng; Hao, Hai-Ping; Zhou, Ping; Qi, Lian-Wen; Li, Ping; Chen, Jun

    2014-01-24

    Generation of a high-purity fraction library for efficiently screening active compounds from natural products is challenging because of their chemical diversity and complex matrices. In this work, a strategy combining high-resolution peak fractionation (HRPF) with a cell-based assay was proposed for target screening of bioactive constituents from natural products. In this approach, peak fractionation was conducted under chromatographic conditions optimized for high-resolution separation of the natural product extract. The HRPF approach was automatically performed according to the predefinition of certain peaks based on their retention times from a reference chromatographic profile. The corresponding HRPF database was collected with a parallel mass spectrometer to ensure purity and characterize the structures of compounds in the various fractions. Using this approach, a set of 75 peak fractions on the microgram scale was generated from 4mg of the extract of Salvia miltiorrhiza. After screening by an ARE-luciferase reporter gene assay, 20 diterpene quinones were selected and identified, and 16 of these compounds were reported to possess novel Nrf2 activation activity. Compared with conventional fixed-time interval fractionation, the HRPF approach could significantly improve the efficiency of bioactive compound discovery and facilitate the uncovering of minor active components.

  6. Chronic sublethal effects of San Francisco Bay sediments on Nereis (neanthes) arenaceodentata: Non treatment factors. Final report

    SciTech Connect

    Moore, D.W.; Dillon, T.M.

    1992-09-01

    Initial development of a chronic sublethal sediment bioassay with the polychaete Nereis (Neanthes) arenaceodentata is described. The test was initiated with 2 to 3-week-old postemergent juvenile worms and terminated after 21 days. The sublethal test end point was estimated individual somatic growth rate (milligrams dry weight/day). The potential bias due to selected nontreatment factors on polychaete survival and growth was evaluated. For example, grain size had no effect, while the number of worms added to each exposure vessel was critical. Direct transfer from 30 ppt to salinities < or = ppt had a highly significant and adverse effect on survival and growth. Both survival and growth of juvenile worms may be adversely affected if test conditions involve exposures to > or = mg/L ammonia or > or = mg/L hydrogen sulfide.... Chronic, Growth, Neanthes, Sediment, Sublethal.

  7. Urban Greening Bay Area

    EPA Pesticide Factsheets

    Information about the San Francisco Bay Water Quality Project (SFBWQP) Urban Greening Bay Area, a large-scale effort to re-envision urban landscapes to include green infrastructure (GI) making communities more livable and reducing stormwater runoff.

  8. Chesapeake Bay TMDL Document

    EPA Pesticide Factsheets

    This page provides the Total Maximum Daily Load (TMDL) report for the Chesapeake Bay. It includes the executive summary, main report, and appendices. The Chesapeake Bay TMDL was established by U.S. EPA Region 3 on December 29, 2010

  9. Chesapeake Bay TMDL

    EPA Pesticide Factsheets

    In 2010 EPA established the Chesapeake Bay TMDL, a comprehensive pollution diet with accountability measures to restore clean water in the bay and local waters. It set limits for nutrients and sediment to meet water quality standards across the watershed

  10. The iron isotope composition of enstatite meteorites: Implications for their origin and the metal/sulfide Fe isotopic fractionation factor

    NASA Astrophysics Data System (ADS)

    Wang, Kun; Savage, Paul S.; Moynier, Frédéric

    2014-10-01

    due to intensive impact-induced shearing stress, or the ultimate destruction of the Shallowater parent body. Analysis of separated enstatite meteorite mineral phases show that the magnetic phase (Fe metal) is systematically enriched in the heavier Fe isotopes when compared to non-magnetic phases (Fe hosted in troilite), which agrees with previous experimental observations and theoretical calculations. The difference between magnetic and non-magnetic phases from enstatite achondrites provides an equilibrium metal-sulfide Fe isotopic fractionation factor of Δ56Femetal-troilite = δ56Femetal - δ56Fetroilite of 0.129 ± 0.060‰ (2 SE) at 1060 ± 80 K, which confirms the predictions of previous theoretical calculations.

  11. Fractional randomness

    NASA Astrophysics Data System (ADS)

    Tapiero, Charles S.; Vallois, Pierre

    2016-11-01

    The premise of this paper is that a fractional probability distribution is based on fractional operators and the fractional (Hurst) index used that alters the classical setting of random variables. For example, a random variable defined by its density function might not have a fractional density function defined in its conventional sense. Practically, it implies that a distribution's granularity defined by a fractional kernel may have properties that differ due to the fractional index used and the fractional calculus applied to define it. The purpose of this paper is to consider an application of fractional calculus to define the fractional density function of a random variable. In addition, we provide and prove a number of results, defining the functional forms of these distributions as well as their existence. In particular, we define fractional probability distributions for increasing and decreasing functions that are right continuous. Examples are used to motivate the usefulness of a statistical approach to fractional calculus and its application to economic and financial problems. In conclusion, this paper is a preliminary attempt to construct statistical fractional models. Due to the breadth and the extent of such problems, this paper may be considered as an initial attempt to do so.

  12. Influence of environmental and anthropogenic factors on the composition, concentration and spatial distribution of microplastics: A case study of the Bay of Brest (Brittany, France).

    PubMed

    Frère, L; Paul-Pont, I; Rinnert, E; Petton, S; Jaffré, J; Bihannic, I; Soudant, P; Lambert, C; Huvet, A

    2017-03-31

    The concentration and spatial distribution of microplastics in the Bay of Brest (Brittany, France) was investigated in two surveys. Surface water and sediment were sampled at nine locations in areas characterized by contrasting anthropic pressures, riverine influences or water mixing. Microplastics were categorized by their polymer type and size class. Microplastic contamination in surface water and sediment was dominated by polyethylene fragments (PE, 53-67%) followed by polypropylene (PP, 16-30%) and polystyrene (PS, 16-17%) microparticles. The presence of buoyant microplastics (PE, PP and PS) in sediment suggests the existence of physical and/or biological processes leading to vertical transfer of lightweight microplastics in the bay. In sediment (upper 5 cm), the percentage of particles identified by Raman micro-spectroscopy was lower (41%) than in surface water (79%) and may explain the apparent low concentration observed in this matrix (0.97 ± 2.08 MP kg(-1) dry sediment). Mean microplastic concentration was 0.24 ± 0.35 MP m(-3) in surface water. We suggest that the observed spatial MP distribution is related to proximity to urbanized areas and to hydrodynamics in the bay. A particle dispersal model was used to study the influence of hydrodynamics on surface microplastic distribution. The outputs of the model showed the presence of a transitional convergence zone in the centre of the bay during flood tide, where floating debris coming from the northern and southern parts of the bay tends to accumulate before being expelled from the bay. Further modelling work and observations integrating (i) the complex vertical motion of microplastics, and (ii) their point sources is required to better understand the fate of microplastics in such a complex coastal ecosystem.

  13. Prophylaxis vs. on-demand treatment with BAY 81-8973, a full-length plasma protein-free recombinant factor VIII product: results from a randomized trial (LEOPOLD II)

    PubMed Central

    Kavakli, K; Yang, R; Rusen, L; Beckmann, H; Tseneklidou-Stoeter, D; Maas Enriquez, M

    2015-01-01

    Background BAY 81-8973 is a new full-length human recombinant factor VIII product manufactured with technologies to improve consistency in glycosylation and expression to optimize clinical performance. Objectives To demonstrate superiority of prophylaxis vs. on-demand therapy with BAY 81-8973 in patients with severe hemophilia A. Patients/Methods In this multinational, randomized, open-label crossover study (LEOPOLD II; ClinicalTrials.gov identifier: NCT01233258), males aged 12–65 years with severe hemophilia A were randomized to twice-weekly prophylaxis (20–30 IU kg−1), 3-times-weekly prophylaxis (30–40 IU kg−1), or on-demand treatment with BAY 81-8973. Potency labeling for BAY 81-8973 was based on the chromogenic substrate assay or adjusted to the one-stage assay. Primary efficacy endpoint was annualized number of all bleeds (ABR). Adverse events (AEs) and immunogenicity were also assessed. Results Eighty patients (on demand, n = 21; twice-weekly prophylaxis, n = 28; 3-times-weekly prophylaxis, n = 31) were treated and analyzed. Mean ± SD ABR was significantly lower with prophylaxis (twice-weekly, 5.7 ± 7.2; 3-times-weekly, 4.3 ± 6.5; combined, 4.9 ± 6.8) vs. on-demand treatment (57.7 ± 24.6; P < 0.0001, anova). Median ABR was reduced by 97% with prophylaxis (twice-weekly, 4.0; 3-times-weekly, 2.0; combined, 2.0) vs. on-demand treatment (60.0). Median ABR was higher with twice-weekly vs. 3-times-weekly prophylaxis during the first 6-month treatment period (4.1 vs. 2.0) but was comparable in the second 6-month period (1.1 vs. 2.0). Few patients reported treatment-related AEs (4%); no treatment-related serious AEs or inhibitors were reported. Conclusions Twice-weekly or 3-times-weekly prophylaxis with BAY 81-8973 reduced median ABR by 97% compared with on-demand therapy, confirming the superiority of prophylaxis. Treatment with BAY 81-8973 was well tolerated. PMID:25546368

  14. San Francisco Bay Area Cargo Forecast.

    DTIC Science & Technology

    1981-06-01

    CHAlES IN SAY AREA AND PACIFIC COAST SHARES FOREIGN CONTAINER CAKRO Pacftic Coast Bay Area bil Total .1 Share of Total as Share of Ypar lted States...patterns and recent trends, and on evaluation of the key factors and events likely to affect future trade. Thus, it was both "past and forward looking...Bay Area Forecast The baseline, high, and low forecasts of Bay Area Trade Route 29 containerized cargo shown in Table 28 are based on evaluation of

  15. An Appetite for Fractions

    ERIC Educational Resources Information Center

    Wilkerson, Trena L.; Bryan, Tommy; Curry, Jane

    2012-01-01

    This article describes how using candy bars as models gives sixth-grade students a taste for learning to represent fractions whose denominators are factors of twelve. Using paper models of the candy bars, students explored and compared fractions. They noticed fewer different representations for one-third than for one-half. The authors conclude…

  16. Carbon Biogeochemistry in Baffin Bay

    NASA Astrophysics Data System (ADS)

    Thomas, Helmuth; Shadwick, Elizabeth H.; Dehairs, Frank; Gratton, Yves

    2013-04-01

    The Arctic Ocean and its carbon cycle are expected to be disproportionately sensitive to climatic change and, thus the Arctic is thought to be an area where such changes may most easily be detected. In particular the carbon cycle in polar ocean is vulnerable due to the relatively high Revelle factor and correspondingly weaker CO2 buffer capacity. The Arctic ocean is influenced by runoff and precipitation, sea ice formation and melting, and the inflow of saline waters from Bering and Fram Straits as well as the Barents Sea Shelf. Pacific water is recognizable as low(er) salinity water, with high concentrations of dissolved inorganic carbon, flowing from the Arctic Ocean to the North Atlantic via the Canadian Arctic Archipelago. In the Baffin Bay area, at the eastern entrance to the Canadian Arctic Archipelago, the water masses of three major oceans meet. Atlantic Ocean water traveling into Baffin Bay as the east Greenland current mixes with waters from the Arctic Ocean and the Pacific Ocean, which enter Baffin Bay via Nares Strait and various outflows of the Canadian Arctic Archipelago, before the waters head southward along the western side of Baffin Bay, eventually feeding into the Labrador Current and the North Atlantic Ocean. Altered mixing ratios of these three water masses and freshwater in the Arctic Ocean have been recorded in recent decades. Any climatically driven alterations in the composition of waters leaving Baffin Bay may have implications for anthropogenic CO2 uptake and, hence, acidification, of the subpolar and temperate North Atlantic. We present carbon cycle, Barium and stable oxygen isotope composition data of sea water and related data from two east to west section across Baffin Bay at 75N and 76N as well as from shelf sections long the eastern and western shelves of Baffin Bay. We investigate water mass characteristics and mixing pattern of the above three major water masses in Baffin Bay. The data have been collected in the framework of two

  17. Storage Stability of Keratinocyte Growth Factor-2 in Lyophilized Formulations: Effects of Formulation Physical Properties and Protein Fraction at the Solid-Air Interface

    PubMed Central

    Devineni, Dilip; Gonschorek, Christoph; Cicerone, Marcus T; Xu, Yemin; Carpenter, John F.; Randolph, Theodore W.

    2014-01-01

    Lyophilized formulations of keratinocyte growth factor-2 (KGF-2) were prepared with a range of disaccharide (sucrose or trehalose) and hydroxyethyl starch (HES) mass ratios. Protein degradation was assessed as a function of time of storage of the dried formulations at 40, 50 and 60 °C. Lyophilized and stored samples were rehydrated, and protein degradation was quantified by measuring loss of monomeric protein with size exclusion chromatography and by determining chemical degradation in the soluble fraction with reverse-phase chromatography. The secondary structure of the protein in the lyophilized formulations was studied with infrared spectroscopy. The magnitudes of degradation were compared the key physical properties of the formulations including retention of protein native secondary structure, glass transition temperature (Tg), inverse mean square displacements −1 for hydrogen atoms (fast β relaxation), and the relaxation time τβ, which correlates with relaxation due to fast Johari-Goldstein motions in the glass[1]. In addition, specific surface areas of the lyophilized formulations were determined by Brunauer-Emmet-Teller analysis of krypton adsorption isotherms and used to estimate the fraction of the KGF-2 molecules residing at the solid-air interface. KGF-2 degradation rates were highest in formulations wherein the protein’s structure was most perturbed, and wherein β relaxations were fastest, but the dominant factor governing KGF-2 degradation in freeze-dried formulations was the fraction of the protein found at the glass solid-air interface. PMID:24859390

  18. Gallotannin-rich Caesalpinia spinosa fraction decreases the primary tumor and factors associated with poor prognosis in a murine breast cancer model

    PubMed Central

    2013-01-01

    Background Several treatment alternatives are available for primary breast cancer, although those for metastatic disease or inflammation associated with tumor progression are ineffective. Therefore, there is a great need for new therapeutic alternatives capable of generating an immune response against residual tumor cells, thus contributing to eradication of micrometastases and cancer stem cells. The use of complex natural products is an excellent therapeutic alternative widely used by Chinese, Hindu, Egyptian, and ancestral Latin-American Indian populations. Methods The present study evaluated cytotoxic, antitumor, and tumor progression activities of a gallotannin-rich fraction derived from Caesalpinia spinosa (P2Et). The parameters evaluated in vitro were mitochondrial membrane depolarization, phosphatidylserine externalization, caspase 3 activation, DNA fragmentation, and clonogenic activity. The parameters evaluated in vivo were tumor growth, leukocyte number, metastatic cell number, and cytokine production by flow cytometry. Results The in vitro results showed that the P2Et fraction induced apoptosis with mitochondrial membrane potential loss, phosphatidylserine externalization, caspase 3 activation, DNA fragmentation, and decreased clonogenic capacity of 4T1 cells. In vivo, the P2Et fraction induced primary tumor reduction in terms of diameter and weight in BALB/c mice transplanted with 4T1 cells and decreased numbers of metastatic cells, mainly in the spleen. Furthermore, decreases in the number of peripheral blood leukocytes (leukemoid reaction) and interleukin 6 (IL-6) serum levels were found, which are events associated with a poor prognosis. The P2Et fraction exerts its activity on the primary tumor, reduces cell migration to distant organs, and decreases IL-6 serum levels, implying tumor microenvironment mechanisms. Conclusions Overall, the P2Et fraction lessens risk factors associated with tumor progression and diminishes primary tumor size, showing

  19. Gap reversal at filling factors 3+1/3 and 3+1/5: towards novel topological order in the fractional quantum Hall regime.

    PubMed

    Kleinbaum, Ethan; Kumar, Ashwani; Pfeiffer, L N; West, K W; Csáthy, G A

    2015-02-20

    In the region of the second Landau level several theories predict fractional quantum Hall states with novel topological order. We report the opening of an energy gap at the filling factor ν=3+1/3, firmly establishing the ground state as a fractional quantum Hall state. This and other odd-denominator states unexpectedly break particle-hole symmetry. Specifically, we find that the relative magnitudes of the energy gaps of the ν=3+1/3 and 3+1/5 states from the upper spin branch are reversed when compared to the ν=2+1/3 and 2+1/5 counterpart states in the lower spin branch. Our findings raise the possibility that at least one of the former states is of an unusual topological order.

  20. An Adaptive Model of Student Performance Using Inverse Bayes

    ERIC Educational Resources Information Center

    Lang, Charles

    2014-01-01

    This article proposes a coherent framework for the use of Inverse Bayesian estimation to summarize and make predictions about student behaviour in adaptive educational settings. The Inverse Bayes Filter utilizes Bayes theorem to estimate the relative impact of contextual factors and internal student factors on student performance using time series…

  1. Posttraumatic Stress Disorder After High-Dose-Rate Brachytherapy for Cervical Cancer With 2 Fractions in 1 Application Under Spinal/Epidural Anesthesia: Incidence and Risk Factors

    SciTech Connect

    Kirchheiner, Kathrin; Czajka-Pepl, Agnieszka; Scharbert, Gisela; Wetzel, Léonore; Sturdza, Alina; Dörr, Wolfgang; Pötter, Richard

    2014-06-01

    Purpose: To investigate the psychological consequences of high-dose-rate brachytherapy with 2 fractions in 1 application under spinal/epidural anesthesia in the treatment of locally advanced cervical cancer. Methods and Materials: In 50 patients with locally advanced cervical cancer, validated questionnaires were used for prospective assessment of acute and posttraumatic stress disorder (ASD/PTSD) (Impact of Event Scale–Revision), anxiety/depression (Hospital Anxiety and Depression Scale), quality of life (European Organization for Research and Treatment of Cancer Quality of Life Questionnaire Core 30/Cervical Cancer 24), physical functioning (World Health Organization performance status), and pain (visual analogue scale), before and during treatment and 1 week and 3 months after treatment. Qualitative interviews were recorded in open format for content analysis. Results: Symptoms of ASD occurred in 30% of patients 1 week after treatment; and of PTSD in 41% 3 months after treatment in association with this specific brachytherapy procedure. Pretreatment predictive variables explain 82% of the variance of PTSD symptoms. Helpful experiences were the support of the treatment team, psychological support, and a positive attitude. Stressful factors were pain, organizational problems during treatment, and immobility between brachytherapy fractions. Conclusions: The specific brachytherapy procedure, as performed in the investigated mono-institutional setting with 2 fractions in 1 application under spinal/epidural anesthesia, bears a considerable risk of traumatization. The source of stress seems to be not the brachytherapy application itself but the maintenance of the applicator under epidural anesthesia in the time between fractions. Patients at risk may be identified before treatment, to offer targeted psycho-social support. The patients' open reports regarding helpful experiences are an encouraging feedback for the treatment team; the reported stressful factors

  2. A Fractional Factorial Design Approach to Examining the Relative Importance of Five Factors in the Definition of Disability.

    ERIC Educational Resources Information Center

    Ortiz, Elizabeth T.

    Programs which provide income maintenance to disabled persons of working age are experiencing rapidly growing enrollments and rising costs. Changes in the definition of disability are thought to be a contributing factor. A review of existing income programs for the work-disabled indicated that social and economic factors were used increasingly in…

  3. The IKK inhibitor Bay 11-7082 induces cell death independent from inhibition of activation of NFκB transcription factors.

    PubMed

    Rauert-Wunderlich, Hilka; Siegmund, Daniela; Maier, Eduard; Giner, Tina; Bargou, Ralf C; Wajant, Harald; Stühmer, Thorsten

    2013-01-01

    Multiple myeloma (MM) displays an NFκB activity-related gene expression signature and about 20% of primary MM samples harbor genetic alterations conducive to intrinsic NFκB signaling activation. The relevance of blocking the classical versus the alternative NFκB signaling pathway and the molecular execution mechanisms involved, however, are still poorly understood. Here, we comparatively tested NFκB activity abrogation through TPCA-1 (an IKK2 inhibitor), BAY 11-7082 (an IKK inhibitor poorly selective for IKK1 and IKK2), and MLN4924 (an NEDD8 activating enzyme (NAE)-inhibitor), and analyzed their anti-MM activity. Whereas TPCA-1 interfered selectively with activation of the classical NFκB pathway, the other two compounds inhibited classical and alternative NFκB signaling without significant discrimination. Noteworthy, whereas TPCA-1 and MLN4924 elicited rather mild anti-MM effects with slight to moderate cell death induction after 1 day BAY 11-7082 was uniformly highly toxic to MM cell lines and primary MM cells. Treatment with BAY 11-7082 induced rapid cell swelling and its initial effects were blocked by necrostatin-1 or the ROS scavenger BHA, but a lasting protective effect was not achieved even with additional blockade of caspases. Because MLN4924 inhibits the alternative NFκB pathway downstream of IKK1 at the level of p100 processing, the quite discordant effects between MLN4924 and BAY 11-7082 must thus be due to blockade of IKK1-mediated NFκB-independent necrosis-inhibitory functions or represent an off-target effect of BAY 11-7082. In accordance with the latter, we further observed that concomitant knockdown of IKK1 and IKK2 did not have any major short-term adverse effect on the viability of MM cells.

  4. Measurement of the B0 to pi l nu Form Factor Shape and Branching Fraction, and Determination of |Vub| with a Loose Neutrino Reconstruction Technique

    SciTech Connect

    Cote, D

    2006-09-26

    The authors report the results of a study of the exclusive charmless semileptonic B{sup 0} {yields} {pi}{sup -}{ell}{sup +}{nu} decay undertaken with approximately 227 million B{bar B} pairs collected at the {Upsilon}(4S) resonance with the BABAR detector. The analysis uses events in which the signal B mesons are reconstructed with a novel loose neutrino reconstruction technique. We obtain partial branching fractions in 12 bins of q{sup 2}, the {ell}{sup +}{nu} invariant mass squared, from which we extract the f{sup +}(q{sup 2}) form factor shape and the total branching fraction: {Beta}(B{sup 0} {yields} {pi}{sup -}{ell}{sup +}{nu}) = 1.44 {+-} 0.08{sub stat} {+-} 0.10{sub syst} x 10{sup -4}. Based on a recent theoretical calculation of the form factor, we find the magnitude of the CKM matrix element |V{sub ub}| to be (4.1 {+-} 0.2{sub stat} {+-} 0.2{sub syst{sub -0.4}{sup +0.6}}FF) x 10{sup -3}, where the last uncertainty is due to the normalization of the form factor.

  5. Statistical optimization of the growth factors for Chaetoceros neogracile using fractional factorial design and central composite design.

    PubMed

    Jeong, Sung-Eun; Park, Jae-Kweon; Kim, Jeong-Dong; Chang, In-Jeong; Hong, Seong-Joo; Kang, Sung-Ho; Lee, Choul-Gyun

    2008-12-01

    Statistical experimental designs; involving (i) a fractional factorial design (FFD) and (ii) a central composite design (CCD) were applied to optimize the culture medium constituents for production of a unique antifreeze protein by the Antartic microalgae Chaetoceros neogracile. The results of the FFD suggested that NaCl, KCl, MgCl2, and Na2SiO3 were significant variables that highly influenced the growth rate and biomass production. The optimum culture medium for the production of an antifreeze protein from C. neogracile was found to be Kalleampersandrsquor;s artificial seawater, pH of 7.0ampersandplusmn;0.5, consisting of 28.566 g/l of NaCl, 3.887 g/l of MgCl2, 1.787 g/l of MgSO4, 1.308 g/l of CaSO4, 0.832 g/l of K2SO4, 0.124 g/l of CaCO3, 0.103 g/l of KBr, 0.0288 g/l of SrSO4, and 0.0282 g/l of H3BO3. The antifreeze activity significantly increased after cells were treated with cold shock (at -5oC) for 14 h. To the best of our knowledge, this is the first report demonstrating an antifreeze-like protein of C. neogracile.

  6. K, Rb, Sr, Ba, U and Th geochemistry of the Lapland Granulites (Fennoscandia). LILE fractionation controlling factors

    NASA Astrophysics Data System (ADS)

    Barbey, P.; Cuney, M.

    1982-12-01

    The LILE geochemical patterns of the three main lithological units (graywacke-shale metasedimentary sequence, tholeiitic metaigneous rocks and migmatitic rocks) of the Lapland Granulite belt are described. K, Ba, Sr and Th concentrations in metasediments are nearly similar to average continental crust, whereas Rb and U are unevenly impoverished. In particular graphitic metashales and calcsilicate rocks are not significantly depleted in uranium. Tholeiitic metaigneous rocks comprises metavolcanics which present K/Rb ratios similar to metasediments, and metaplutonics with LILE abundances close to those of the low-K-tholeiites. Migmatites show wide range in LILE content. Metatexites and diatexites have higher K, Rb, Th and U concentrations and similar K/Rb ratios with respect to equivalent unmobilized rocks. Potassic pegmatoïds are strongly enriched K, Rb, Ba and Th but moderately in Sr and U. Plagioclasic pegmatoids and ferromagnesian restites are rich in Sr and poor in other LIL elements. A comparative review of the LILE geochemistry between Lapland granulites and equivalent lithological units taken from non metamorphosed to high grade terrains suggest that fractionation processes are not systematic but controlled by original lithology and mineralogy, mineral — fluid equilibria during progressive (or retrogressive) metamorphism and mineral-melt-fluid equilibria during anatexis. Moreover, statistical analysis on K-Rb distribution patterns in these various rock types shows that there is no metamorphic trend characteristic of granulite facies terrains as previously suggested.

  7. Bay of Fundy

    NASA Technical Reports Server (NTRS)

    2006-01-01

    The highest tides on Earth occur in the Minas Basin, the eastern extremity of the Bay of Fundy, Nova Scotia, Canada, where the tide range can reach 16 meters when the various factors affecting the tides are in phase. The primary cause of the immense tides of Fundy is a resonance of the Bay of Fundy-Gulf of Maine system. The system is effectively bounded at this outer end by the edge of the continental shelf with its approximately 40:1 increase in depth. The system has a natural period of approximately 13 hours, which is close to the 12h25m period of the dominant lunar tide of the Atlantic Ocean. Like a father pushing his daughter on a swing, the gentle Atlantic tidal pulse pushes the waters of the Bay of Fundy-Gulf of Maine basin at nearly the optimum frequency to cause a large to-and-fro oscillation. The greatest slosh occurs at the head (northeast end) of the system. The high tide image (top) was acquired April 20, 2001, and the low tide image (bottom) was acquired September 30, 2002. The images cover an area of 16.5 by 21 km, and are centered near 64 degrees west longitude and 45.5 degrees north latitude.

    With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet.

    ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products.

    The broad spectral coverage and high spectral resolution of ASTER provides scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active

  8. Tampa Bay: Chapter N

    USGS Publications Warehouse

    Handley, Larry; Spear, Kathryn; Cross, Lindsay; Baumstark, René; Moyer, Ryan; Thatcher, Cindy

    2013-01-01

    Tampa Bay is Florida’s largest open-water estuary and encompasses an area of approximately 1036 km2 (400 mi2) (Burgan and Engle, 2006; TBNEP, 2006). The Bay’s watershed drains 5,698 km2 (2,200 mi2) of land and includes freshwater from the Hillsborough River to the north east, the Alafia and Little Manatee rivers to the east, and the Manatee River to the south (Figure 1). Freshwater inflow also enters the bay from the Lake Tarpon Canal, from small tidal tributaries, and from watershed runoff. Outflow travels from the upper bay segments (Hillsborough Bay and Old Tampa Bay) into Middle and Lower Tampa Bay. Southwestern portions of the water shed flow through Boca Ciega Bay into the Intracoastal Waterway and through the Southwest Channel and Passage Key Inlet into the Gulf of Mexico. The average depth in most of Tampa Bay is only 3.4 m (11 ft); however, 129 km (80 mi) of shipping channels with a maximum depth of 13.1 m (43 ft) have been dredged over time and are regularly maintained. These channels help to support the three ports within the bay, as well as commercial and recreational boat traffic.

  9. Quantitative proteomics of fractionated membrane and lumen exosome proteins from isogenic metastatic and nonmetastatic bladder cancer cells reveal differential expression of EMT factors.

    PubMed

    Jeppesen, Dennis Kjølhede; Nawrocki, Arkadiusz; Jensen, Steffen Grann; Thorsen, Kasper; Whitehead, Bradley; Howard, Kenneth A; Dyrskjøt, Lars; Ørntoft, Torben Falck; Larsen, Martin R; Ostenfeld, Marie Stampe

    2014-03-01

    Cancer cells secrete soluble factors and various extracellular vesicles, including exosomes, into their tissue microenvironment. The secretion of exosomes is speculated to facilitate local invasion and metastatic spread. Here, we used an in vivo metastasis model of human bladder carcinoma cell line T24 without metastatic capacity and its two isogenic derivate cell lines SLT4 and FL3, which form metastases in the lungs and liver of mice, respectively. Cultivation in CLAD1000 bioreactors rather than conventional culture flasks resulted in a 13- to 16-fold increased exosome yield and facilitated quantitative proteomics of fractionated exosomes. Exosomes from T24, SLT4, and FL3 cells were partitioned into membrane and luminal fractions and changes in protein abundance related to the gain of metastatic capacity were identified by quantitative iTRAQ proteomics. We identified several proteins linked to epithelial-mesenchymal transition, including increased abundance of vimentin and hepatoma-derived growth factor in the membrane, and casein kinase II α and annexin A2 in the lumen of exosomes, respectively, from metastatic cells. The change in exosome protein abundance correlated little, although significant for FL3 versus T24, with changes in cellular mRNA expression. Our proteomic approach may help identification of proteins in the membrane and lumen of exosomes potentially involved in the metastatic process.

  10. Report: Factors affecting the content of potentially toxic elements in the biodegradable fraction of autoclaved household waste.

    PubMed

    Papadimitriou, Efstathios K; Barton, John R

    2009-10-01

    A total of 3.4 tonnes of household waste (HW) that had a controlled composition were autoclaved in the presence of saturated steam for 1 h at the nominal temperature levels of 130, 160 and 200 degrees C. The levels of Cd, Cr, Cu, Pb, Hg, Ni, and Zn were examined in samples of the fibrous, predominantly-biodegradable fraction (floc) derived from the autoclaved HW, aqueous extracts from floc, and the condensate from steam that was released from the reactor. This data was used to study the impact of the overall levels of potential toxic elements (PTEs) in HW feed and autoclaving process parameters on the levels of PTEs in floc. No consistent correlation was found to exist between the levels of PTEs in HW feed and those in the produced floc. This was primarily attributed in the inherent variability of PTEs in waste materials. Autoclaving temperature, pressure and mixing were all found to affect the mobilization and removal of PTEs from HW and their presence in floc. Temperature/pressure appeared to increase PTE removal through the condensate path, although that removal had only a negligible impact on the contents of PTEs in floc. Autoclaving temperature correlated positively, although not significantly at a 95% confidence level, with the levels of Pb and Zn in floc. On the other hand, it correlated negatively with the Hg content in floc. Increasing temperature/pressure also increased the water extraction of PTEs from floc, with the exception of Cr. However, in the context of producing high quality compost, the extraction rates were too low to bring about a substantial decrease of PTEs in floc.

  11. CASCO BAY PLAN

    EPA Science Inventory

    Casco Bay lies at the heart of Maine's most populated area. The health of its waters, wetlands, and wildlife depend in large part on the activities of the quarter-million residents who live in its watershed. Less than 30 years ago, portions of Casco Bay were off-limits to recr...

  12. Bay Mills' Bold Approach

    ERIC Educational Resources Information Center

    Freedman, Eric

    2011-01-01

    It's a long, long way from Bay Mills Community College, near the shores of frigid Lake Superior, to Detroit. But distance, time and demographics aside, the school and the city are united by Bay Mills' status as the nation's only tribally controlled college that authorizes quasi-public schools, known officially as public school academies. And it's…

  13. Understanding Multiplication of Fractions.

    ERIC Educational Resources Information Center

    Sweetland, Robert D.

    1984-01-01

    Discussed the use of Cuisenaire rods in teaching the multiplication of fractions. Considers whole number times proper fraction, proper fraction multiplied by proper fraction, mixed number times proper fraction, and mixed fraction multiplied by mixed fractions. (JN)

  14. Diagnostic model construction and example analysis of habitat degradation in enclosed bay: III. Sansha Bay habitat restoration strategy

    NASA Astrophysics Data System (ADS)

    Sun, Peng; Yu, Ge; Chen, Zhaozhang; Hu, Jianyu; Liu, Guangxing; Xu, Donghui

    2015-03-01

    Unbalanced inputs and outputs of material are the root cause of habitat degradation in Sansha Bay, Fujian Province, China. However, the cumulative pollution varies in different geographic locations and natural conditions in the enclosed bay. In this study, hydrodynamic conditions, sediment characteristics, and aquaculture methods were recognized as the underlying causes of spatial heterogeneity in the distribution of nitrogen and phosphorous pollutants, the two major controlling factors of habitat degradation in the bay area. In order to achieve the goal of balancing nutrient inputs and outputs in Sansha Bay, we developed a feasible and practical zone restoration strategy for reasonable adjustment and arrangement of aquaculture species and production scale in accordance with varying hydrodynamic conditions and sediment characteristics in six sub-bay areas (sub-systems). The proposed zone restoration strategy lays a solid foundation for habitat restoration and management in Sansha Bay.

  15. Diagnostic model construction and example analysis of habitat degradation in enclosed bay: III. Sansha Bay habitat restoration strategy

    NASA Astrophysics Data System (ADS)

    Sun, Peng; Yu, Ge; Chen, Zhaozhang; Hu, Jianyu; Liu, Guangxing; Xu, Donghui

    2014-09-01

    Unbalanced inputs and outputs of material are the root cause of habitat degradation in Sansha Bay, Fujian Province, China. However, the cumulative pollution varies in different geographic locations and natural conditions in the enclosed bay. In this study, hydrodynamic conditions, sediment characteristics, and aquaculture methods were recognized as the underlying causes of spatial heterogeneity in the distribution of nitrogen and phosphorous pollutants, the two major controlling factors of habitat degradation in the bay area. In order to achieve the goal of balancing nutrient inputs and outputs in Sansha Bay, we developed a feasible and practical zone restoration strategy for reasonable adjustment and arrangement of aquaculture species and production scale in accordance with varying hydrodynamic conditions and sediment characteristics in six sub-bay areas (sub-systems). The proposed zone restoration strategy lays a solid foundation for habitat restoration and management in Sansha Bay.

  16. Building Models with Bayes

    NASA Astrophysics Data System (ADS)

    Hart, Gus; Nelson, Lance J.; Reese, Shane

    2011-10-01

    The whole of modern Bayesian statistical methods is founded on the simple idea of Bayes rule, stated by the Reverend Thomas Bayes, and presented in 1763. Bayes rule is merely a simple statement of conditional probablility but can be used to make strong inferences. However, the application of Bayes rule to all but the simplest problems requires significant computation. As a result, Baysian-based approaches have been largely impractical until high-speed computing became inexpensive in the recent in the last 20 years or so. We discuss the general idea behind Bayes rule, how to use it to build physical models, and illustrate the approach for a simple case of lattice gas models.

  17. Fractionation factors and activation energies for exchange of the low barrier hydrogen bonding proton in peptidyl trifluoromethyl ketone complexes of chymotrypsin.

    PubMed

    Lin, J; Westler, W M; Cleland, W W; Markley, J L; Frey, P A

    1998-12-08

    NMR investigations have been carried out of complexes between bovine chymotrypsin Aalpha and a series of four peptidyl trifluoromethyl ketones, listed here in order of increasing affinity for chymotrypsin: N-Acetyl-L-Phe-CF3, N-Acetyl-Gly-L-Phe-CF3, N-Acetyl-L-Val-L-Phe-CF3, and N-Acetyl-L-Leu-L-Phe-CF3. The D/H fractionation factors (phi) for the hydrogen in the H-bond between His 57 and Asp 102 (His 57-Hdelta1) in these four complexes at 5 degreesC were in the range phi = 0.32-0.43, expected for a low-barrier hydrogen bond. For this series of complexes, measurements also were made of the chemical shifts of His 57-Hepsilon1 (delta2,2-dimethylsilapentane-5-sulfonic acid 8.97-9. 18), the exchange rate of the His 57-Hdelta1 proton with bulk water protons (284-12.4 s-1), and the activation enthalpies for this hydrogen exchange (14.7-19.4 kcal.mol-1). It was found that the previously noted correlations between the inhibition constants (Ki 170-1.2 microM) and the chemical shifts of His 57-Hdelta1 (delta2, 2-dimethylsilapentane-5-sulfonic acid 18.61-18.95) for this series of peptidyl trifluoromethyl ketones with chymotrypsin [Lin, J., Cassidy, C. S. & Frey, P. A. (1998) Biochemistry 37, 11940-11948] could be extended to include the fractionation factors, hydrogen exchange rates, and hydrogen exchange activation enthalpies. The results support the proposal of low barrier hydrogen bond-facilitated general base catalysis in the addition of Ser 195 to the peptidyl carbonyl group of substrates in the mechanism of chymotrypsin-catalyzed peptide hydrolysis. Trends in the enthalpies for hydrogen exchange and the fractionation factors are consistent with a strong, double-minimum or single-well potential hydrogen bond in the strongest complexes. The lifetimes of His 57-Hdelta1, which is solvent shielded in these complexes, track the strength of the hydrogen bond. Because these lifetimes are orders of magnitude shorter than those of the complexes themselves, the enzyme must have a

  18. Coupling asymmetric flow-field flow fractionation and fluorescence parallel factor analysis reveals stratification of dissolved organic matter in a drinking water reservoir.

    PubMed

    Pifer, Ashley D; Miskin, Daniel R; Cousins, Sarah L; Fairey, Julian L

    2011-07-08

    Using asymmetrical flow field-flow fractionation (AF4) and fluorescence parallel factor analysis (PARAFAC), we showed physicochemical properties of chromophoric dissolved organic matter (CDOM) in the Beaver Lake Reservoir (Lowell, AR) were stratified by depth. Sampling was performed at a drinking water intake structure from May to July 2010 at three depths (3-, 10-, and 18-m) below the water surface. AF4-fractograms showed that the CDOM had diffusion coefficient peak maximums between 3.5 and 2.8 x 10⁻⁶ cm² s⁻¹, which corresponded to a molecular weight range of 680-1950 Da and a size of 1.6-2.5 nm. Fluorescence excitation-emission matrices of whole water samples and AF4-generated fractions were decomposed with a PARAFAC model into five principal components. For the whole water samples, the average total maximum fluorescence was highest for the 10-m depth samples and lowest (about 40% less) for 18-m depth samples. While humic-like fluorophores comprised the majority of the total fluorescence at each depth, a protein-like fluorophore was in the least abundance at the 10-m depth, indicating stratification of both total fluorescence and the type of fluorophores. The results present a powerful approach to investigate CDOM properties and can be extended to investigate CDOM reactivity, with particular applications in areas such as disinfection byproduct formation and control and evaluating changes in drinking water source quality driven by climate change.

  19. Circulating Fibroblast Growth Factor 21 is Associated with Diastolic Dysfunction in Heart Failure Patients with Preserved Ejection Fraction

    PubMed Central

    Chou, Ruey-Hsing; Huang, Po-Hsun; Hsu, Chien-Yi; Chang, Chun-Chin; Leu, Hsin-Bang; Huang, Chin-Chou; Chen, Jaw-Wen; Lin, Shing-Jong

    2016-01-01

    Fibroblast growth factor 21 (FGF21), a polypeptide ligand promoted glucose homeostasis and lipids metabolism, was recently reported to attenuate cardiac hypertrophy. The aim of this study was to investigate the impact of FGF21 in diastolic heart failure. Subjects admitted for coronary angiogram were screened for heart failure, and those with left ventricular (LV) ejection fraction < 45% were excluded. Diastolic dysfunction was defined as functional abnormalities that exist during LV relaxation and filling by echocardiographic criteria. Plasma levels of FGF21 and N-terminal Pro-Brain Natriuretic Peptide (NT-pro-BNP) were determined. All patients were followed up for 1 year, or till the occurrence of heart failure readmission or death. Totally 95 patients with diastolic dysfunction and 143 controls were enrolled. Circulating FGF21 level was correlated with echocardiographic parameters of diastolic function and LV end-diastolic pressure (LVEDP). In multivariate logistic analysis, FGF21 was significantly associated with diastolic dysfunction, either identified by echocardiographic criteria (odds ratio: 2.97, p = 0.012) or confirmed with LVEDP level (odds ratio: 3.73, p = 0.030). Both plasma FGF21 (log rank p < 0.0001) and NT-pro-BNP levels (log rank p = 0.0057) showed good predictive power to the 1-year adverse cardiac events. This finding suggested FGF21 could be involved in the pathophysiology of diastolic heart failure. PMID:27650781

  20. Heavy metals fractionation in Ganga River sediments, India.

    PubMed

    Purushothaman, P; Chakrapani, G J

    2007-09-01

    The Ganga River is the largest river in India which, originates in the Himalayas and along with the Brahmaputra River, another Himalayan river, transports enormous amounts of sediments from the Indian sub-continent to the Bay of Bengal. Because of the important role of river sediments in the biogeochemical cycling of elements, the Ganga river sediments, collected from its origin to the down stretches, were studied in the present context, to assess the heavy metals associated with different chemical fractions of sediments. The fractionation of metals were studied in the sediments using SM&T protocol for the extraction of heavy metals and geo-accumulation index (GAI) (Muller, Schwermetalle in den sedimenten des rheins - Veranderungen seit. Umschau, 79, 778-783, 1979) and Metal Enrichment Factor (MEF) in different fractions were calculated. As with many river systems, residual fractions constitute more than 60% of total metals, except Zn, Cu and Cr. However, the reducible and organic and sulfide components also act as major sinks for metals in the down stretches of the river, which is supported by the high GAI and MEF values. The GAI values range between 4 and 5 and MEF exceed more than 20 for almost all the locations in the downstream locations indicating to the addition of metals through urban and industrial effluents, as compared to the low metals concentrations with less GAI and MEF in the pristine river sediments from the rivers in Himalayas.

  1. Benthic fluxes in San Francisco Bay

    USGS Publications Warehouse

    Hammond, Douglas E.; Fuller, C.; Harmon, D.; Hartman, Blayne; Korosec, M.; Miller, L.G.; Rea, R.; Warren, S.; Berelson, W.; Hager, S.W.

    1985-01-01

    Measurements of benthic fluxes have been made on four occasions between February 1980 and February 1981 at a channel station and a shoal station in South San Francisco Bay, using in situ flux chambers. On each occasion replicate measurements of easily measured substances such as radon, oxygen, ammonia, and silica showed a variability (??1??) of 30% or more over distances of a few meters to tens of meters, presumably due to spatial heterogeneity in the benthic community. Fluxes of radon were greater at the shoal station than at the channel station because of greater macrofaunal irrigation at the former, but showed little seasonal variability at either station. At both stations fluxes of oxygen, carbon dioxide, ammonia, and silica were largest following the spring bloom. Fluxes measured during different seasons ranged over factors of 2-3, 3, 4-5, and 3-10 (respectively), due to variations in phytoplankton productivity and temperature. Fluxes of oxygen and carbon dioxide were greater at the shoal station than at the channel station because the net phytoplankton productivity is greater there and the organic matter produced must be rapidly incorporated in the sediment column. Fluxes of silica were greater at the shoal station, probably because of the greater irrigation rates there. N + N (nitrate + nitrite) fluxes were variable in magnitude and in sign. Phosphate fluxes were too small to measure accurately. Alkalinity fluxes were similar at the two stations and are attributed primarily to carbonate dissolution at the shoal station and to sulfate reduction at the channel station. The estimated average fluxes into South Bay, based on results from these two stations over the course of a year, are (in mmol m-2 d-1): O2 = -27 ?? 6; TCO2 = 23 ?? 6; Alkalinity = 9 ?? 2; N + N = -0.3 ?? 0.5; NH3 = 1.4 ?? 0.2; PO4 = 0.1 ?? 0.4; Si = 5.6 ?? 1.1. These fluxes are comparable in magnitude to those in other temperate estuaries with similar productivity, although the seasonal

  2. Analysis of Subcellular RNA Fractions Revealed a Transcription-Independent Effect of Tumor Necrosis Factor Alpha on Splicing, Mediated by Spt5

    PubMed Central

    Diamant, Gil; Eisenbaum, Tal; Leshkowitz, Dena

    2016-01-01

    The proinflammatory cytokine tumor necrosis factor alpha (TNF-α) modulates the expression of many genes, primarily through activation of NF-κB. Here, we examined the global effects of the elongation factor Spt5 on nascent and mature mRNAs of TNF-α-induced cells using chromatin and cytosolic subcellular fractions. We identified several classes of TNF-α-induced genes controlled at the level of transcription, splicing, and chromatin retention. Spt5 was found to facilitate splicing and chromatin release in genes displaying high induction rates. Further analysis revealed striking effects of TNF-α on the splicing of 25% of expressed genes; the vast majority were not transcriptionally induced. Splicing enhancement of noninduced genes by TNF-α was transient and independent of NF-κB. Investigating the underlying basis, we found that Spt5 is required for the splicing facilitation of the noninduced genes. In line with this, Spt5 interacts with Sm core protein splicing factors. Furthermore, following TNF-α treatment, levels of RNA polymerase II (Pol II) but not Spt5 are reduced from the splicing-induced genes, suggesting that these genes become enriched with a Pol II-Spt5 form. Our findings revealed the Pol II-Spt5 complex as a highly competent coordinator of cotranscriptional splicing. PMID:26903558

  3. Analysis of Subcellular RNA Fractions Revealed a Transcription-Independent Effect of Tumor Necrosis Factor Alpha on Splicing, Mediated by Spt5.

    PubMed

    Diamant, Gil; Eisenbaum, Tal; Leshkowitz, Dena; Dikstein, Rivka

    2016-05-01

    The proinflammatory cytokine tumor necrosis factor alpha (TNF-α) modulates the expression of many genes, primarily through activation of NF-κB. Here, we examined the global effects of the elongation factor Spt5 on nascent and mature mRNAs of TNF-α-induced cells using chromatin and cytosolic subcellular fractions. We identified several classes of TNF-α-induced genes controlled at the level of transcription, splicing, and chromatin retention. Spt5 was found to facilitate splicing and chromatin release in genes displaying high induction rates. Further analysis revealed striking effects of TNF-α on the splicing of 25% of expressed genes; the vast majority were not transcriptionally induced. Splicing enhancement of noninduced genes by TNF-α was transient and independent of NF-κB. Investigating the underlying basis, we found that Spt5 is required for the splicing facilitation of the noninduced genes. In line with this, Spt5 interacts with Sm core protein splicing factors. Furthermore, following TNF-α treatment, levels of RNA polymerase II (Pol II) but not Spt5 are reduced from the splicing-induced genes, suggesting that these genes become enriched with a Pol II-Spt5 form. Our findings revealed the Pol II-Spt5 complex as a highly competent coordinator of cotranscriptional splicing.

  4. Mystery Fractions

    ERIC Educational Resources Information Center

    Bhattacharyya, Sonalee; Namakshi, Nama; Zunker, Christina; Warshauer, Hiroko K.; Warshauer, Max

    2016-01-01

    Making math more engaging for students is a challenge that every teacher faces on a daily basis. These authors write that they are constantly searching for rich problem-solving tasks that cover the necessary content, develop critical-thinking skills, and engage student interest. The Mystery Fraction activity provided here focuses on a key number…

  5. Pitch Fractionation.

    DTIC Science & Technology

    1981-12-15

    13 3. Solvent Fractionation Experiments .................................... 15 4. Fourier Transform Infrared Spectra for A240 Petrolem Pitch AG 12...34 and Mesophase Pitch AG 164B ............................... 21 5. Fourier Transform Infrared Spectra ................................... 23 6...compared by Fourier transform infrared (FTIR) analysis using a Digilab Model FTS 14 spectrophotometer (Rockwell International, Anaheim, California

  6. Florida Bay: A history of recent ecological changes

    USGS Publications Warehouse

    Fourqurean, J.W.; Robblee, M.B.

    1999-01-01

    Florida Bay is a unique subtropical estuary at the southern tip of the Florida peninsula. Recent ecological changes (seagrass die-off, algal blooms, increased turbidity) to the Florida Bay ecosystem have focused the attention of the public, commercial interests, scientists, and resource managers on the factors influencing the structure and function of Florida Bay. Restoring Florida Bay to some historic condition is the goal of resource managers, but what is not clear is what an anthropogenically-unaltered Florida Bay would look like. While there is general consensus that human activities have contributed to the changes occurring in the Florida Bay ecosystem, a high degree of natural system variability has made elucidation of the links between human activity and Florida Bay dynamics difficult. Paleoecological analyses, examination of long-term datasets, and directed measurements of aspects of the ecology of Florida Bay all contribute to our understanding of the behavior of the bay, and allow quantification of the magnitude of the recent ecological changes with respect to historical variability of the system.

  7. Climate and anthropogenic factors influencing an estuarine ecosystem from NW Iberia: new high resolution multiproxy analyses from San Simón Bay (Ría de Vigo)

    NASA Astrophysics Data System (ADS)

    Muñoz Sobrino, Castor; García-Moreiras, Iria; Castro, Yoel; Martínez Carreño, Natalia; de Blas, Esther; Fernandez Rodríguez, Carlos; Judd, Alan; García-Gil, Soledad

    2014-06-01

    Two sedimentary sequences (coastal and subtidal) were studied in San Simón Bay (Ría de Vigo), situated on the Atlantic coast of NW Iberia. The coastal record is a shallowing upward sequence which evidences a locally-developed low marsh, situated below the current beach, and dated at the second half of the 4th century. During the following decades this low marsh was progressively replaced by an alder swamp which formed on it. This suggests an apparent stabilisation or slow-down of the relative sea-level (RSL), in this site, at the beginning of the Dark Ages (DA). The subtidal sequence studied reflects the main changes in the landscape, the hydrological conditions, climate and RSL affecting this part of NW Iberia during the last 1250 years. Evidence of changing dinocysts content in the sediment reveals that two centennial or decadal-scale episodes existed of shelf marine waters more intensely penetrating inside the bay: between the 15th-18th centuries and at ca 1800-1930 AD. Besides, we related different proxies with the occurrence of four main climatic stages, namely the previously described Dark Ages (DA, ca 350-750 AD), the Mediaeval Climatic Anomaly (MCA, ca 750-1100 AD) and the Little Ice Age (LIA. ca 1500-1930 AD); in addition we propose a regional MCA/LIA transition (ca 1100-1500 AD) that it has not been previously described. Our environmental characterization indicates a persistent North Atlantic Oscillation (NAO) negative mode domain in Ría de Vigo during the MCA, but this became weaker during the LIA and, probably, also during the earlier DA. NAO mode become more irregular during the MCA/LIA transition, generally persisting in dominant negative mode except for a phase of minor upwelling intensification, at ca 1150-1350 AD, which mainly affected the external parts of the ria. We postulate that an almost simultaneous phase (ca 1100-1350 AD) of stronger continental contribution in the sediments may be related to increasing storm intensities, probably linked

  8. Fifteen-year population attributable fractions and causal pies of risk factors for newly developed hepatocellular carcinomas in 11,801 men in Taiwan.

    PubMed

    Liao, Shu-Fen; Yang, Hwai-I; Lee, Mei-Hsuan; Chen, Chien-Jen; Lee, Wen-Chung

    2012-01-01

    Development of hepatocellular carcinoma (HCC) is a multi-factorial process. Chronic infections with hepatitis B virus (HBV) and hepatitis C virus (HCV) are important risk factors of HCC. Host factors, such as alcohol drinking, may also play a role. This study aims to provide a synthesis view on the development of HCC by examining multiple risk factors jointly and collectively. Causal-pie modeling technique was applied to analyze a cohort of 11,801 male residents (followed up for 15 years) in Taiwan, during which a total of 298 incident HCC cases were ascertained. The rate ratios adjusted by age were further modeled by an additive Poisson regression. Population attributable fractions (PAFs) and causal-pie weights (CPWs) were calculated. A PAF indicates the magnitude of case-load reduction under a particular intervention scenario, whereas a CPW for a particular class of causal pies represents the proportion of HCC cases attributable to that class. Using PAF we observed a chance to reduce around 60% HCC risk moving from no HBV-related intervention to the total elimination of the virus. An additional ∼15% (or ∼5%) reduction can be expected, if the HBV-related intervention is coupled with an HCV-related intervention (or an anti-drinking campaign). Eight classes of causal pies were found to be significant, including four dose-response classes of HBV (total CPW=52.7%), one independent-effect class of HCV (CPW=14.4%), one HBV-alcohol interaction class (CPW=4.2%), one HBV-HCV interaction class (CPW=1.7%), and one all-unknown class (CPW=27.0%). Causal-pie modeling for HCC helps clarify the relative importance of each viral and host factor, as well as their interactions.

  9. Phytoplankton composition and microcystin concentrations in open and closed bays of Lake Victoria, Tanzania.

    PubMed

    Mbonde, Athanasio S; Sitoki, Lewis; Kurmayer, Rainer

    2015-01-01

    This study was carried out in order to investigate the spatial variation of algal toxin (microcystin) concentrations along the shoreline of Lake Victoria. A total of 16 nearshore stations differing in connectivity to the main lake basin were categorized as either closed bays (ratio of bay area to bay opening < 1) or open bays (ratio ≥ 1) and sampled during November and December 2009. Water samples were analyzed for total phosphorus (TP), chlorophyll a, phytoplankton community composition and concentrations of microcystin (MC). Open and closed bays were significantly different for phytoplankton abundance and composition: Average phytoplankton biovolume was higher for closed bays (45 mm(3) L(-1) ± 11 SE) than open bays (5 ± 2 mm(3) L(-1)). Cyanobacterial biovolume (mainly Microcystis spp., Anabaena spp. and Planktolyngbya spp.) also was significantly higher in closed bays (82 ± 9% of total biovolume) than in open bays (44 ± 5%). In contrast, diatom biovolume was lower in closed bays (7 ± 1%) than in open bays (36 ± 6%). MCs were found only among sites from closed bays and concentrations ranged from 0.4 to 13 μg L(-1) MC-LR equiv. and coincided with high abundance of Microcystis spp. It is concluded that the level of water exchange from individual bays to the main basin is an important factor influencing eutrophication and microcystin production in nearshore habitats of Lake Victoria.

  10. Observations and a linear model of water level in an interconnected inlet-bay system

    USGS Publications Warehouse

    Aretxabaleta, Alfredo; Ganju, Neil Kamal; Butman, Bradford; Signell, Richard

    2017-01-01

    A system of barrier islands and back-barrier bays occurs along southern Long Island, New York, and in many coastal areas worldwide. Characterizing the bay physical response to water level fluctuations is needed to understand flooding during extreme events and evaluate their relation to geomorphological changes. Offshore sea level is one of the main drivers of water level fluctuations in semienclosed back-barrier bays. We analyzed observed water levels (October 2007 to November 2015) and developed analytical models to better understand bay water level along southern Long Island. An increase (∼0.02 m change in 0.17 m amplitude) in the dominant M2 tidal amplitude (containing the largest fraction of the variability) was observed in Great South Bay during mid-2014. The observed changes in both tidal amplitude and bay water level transfer from offshore were related to the dredging of nearby inlets and possibly the changing size of a breach across Fire Island caused by Hurricane Sandy (after December 2012). The bay response was independent of the magnitude of the fluctuations (e.g., storms) at a specific frequency. An analytical model that incorporates bay and inlet dimensions reproduced the observed transfer function in Great South Bay and surrounding areas. The model predicts the transfer function in Moriches and Shinnecock bays where long-term observations were not available. The model is a simplified tool to investigate changes in bay water level and enables the evaluation of future conditions and alternative geomorphological settings.

  11. Isotope fractionation

    NASA Astrophysics Data System (ADS)

    Bell, Peter M.

    A rash of new controversy has emerged around the subject of mass-independent isotope fractionation effects, particularly in the case of the oxygen isotopes. To be sure, the controversy has been around for awhile, but it has been given new impetus by the results of a recent study by Mark H. Thiemens and John E. Heidenreich III of the University of California, San Diego (Science, March 4, 1983).Gustav Arrhenius has been trying to convince the planetary science community that chemical effects in isotope fractionation processes could explain observations in meteorites that appear to be outside of the traditionally understood mass-dependent fractionations (G. Arrhenius, J . L. McCrumb, and N. F. Friedman, Astrophys. Space Sci, 65, 297, 1974). Robert Clayton had made the basic observations of oxygen in carbonaceous chondrites that the slope of the δ17 versus δ18 line was 1 instead of the slope of ½ characteristic of terrestrial rocks and lunar samples (Ann. Rev. Nucl. Part. Sci., 28, 501, 1978). The mass-independent effects were ascribed to the apparent contribution of an ancient presolar system component of O16.

  12. Measurement of the D0→π-e+νe differential decay branching fraction as a function of q2 and study of form factor parametrizations

    NASA Astrophysics Data System (ADS)

    Lees, J. P.; Poireau, V.; Tisserand, V.; Grauges, E.; Palano, A.; Eigen, G.; Stugu, B.; Brown, D. N.; Kerth, L. T.; Kolomensky, Yu. G.; Lee, M. J.; Lynch, G.; Koch, H.; Schroeder, T.; Hearty, C.; Mattison, T. S.; McKenna, J. A.; So, R. Y.; Khan, A.; Blinov, V. E.; Buzykaev, A. R.; Druzhinin, V. P.; Golubev, V. B.; Kravchenko, E. A.; Onuchin, A. P.; Serednyakov, S. I.; Skovpen, Yu. I.; Solodov, E. P.; Todyshev, K. Yu.; Lankford, A. J.; Mandelkern, M.; Dey, B.; Gary, J. W.; Long, O.; Campagnari, C.; Franco Sevilla, M.; Hong, T. M.; Kovalskyi, D.; Richman, J. D.; West, C. A.; Eisner, A. M.; Lockman, W. S.; Panduro Vazquez, W.; Schumm, B. A.; Seiden, A.; Chao, D. S.; Cheng, C. H.; Echenard, B.; Flood, K. T.; Hitlin, D. G.; Miyashita, T. S.; Ongmongkolkul, P.; Porter, F. C.; Röhrken, M.; Andreassen, R.; Huard, Z.; Meadows, B. T.; Pushpawela, B. G.; Sokoloff, M. D.; Sun, L.; Bloom, P. C.; Ford, W. T.; Gaz, A.; Smith, J. G.; Wagner, S. R.; Ayad, R.; Toki, W. H.; Spaan, B.; Bernard, D.; Verderi, M.; Playfer, S.; Bettoni, D.; Bozzi, C.; Calabrese, R.; Cibinetto, G.; Fioravanti, E.; Garzia, I.; Luppi, E.; Piemontese, L.; Santoro, V.; Calcaterra, A.; de Sangro, R.; Finocchiaro, G.; Martellotti, S.; Patteri, P.; Peruzzi, I. M.; Piccolo, M.; Rama, M.; Zallo, A.; Contri, R.; Lo Vetere, M.; Monge, M. R.; Passaggio, S.; Patrignani, C.; Robutti, E.; Bhuyan, B.; Prasad, V.; Adametz, A.; Uwer, U.; Lacker, H. M.; Dauncey, P. D.; Mallik, U.; Chen, C.; Cochran, J.; Prell, S.; Ahmed, H.; Gritsan, A. V.; Arnaud, N.; Davier, M.; Derkach, D.; Grosdidier, G.; Le Diberder, F.; Lutz, A. M.; Malaescu, B.; Roudeau, P.; Stocchi, A.; Wormser, G.; Lange, D. J.; Wright, D. M.; Coleman, J. P.; Fry, J. R.; Gabathuler, E.; Hutchcroft, D. E.; Payne, D. J.; Touramanis, C.; Bevan, A. J.; di Lodovico, F.; Sacco, R.; Cowan, G.; Bougher, J.; Brown, D. N.; Davis, C. L.; Denig, A. G.; Fritsch, M.; Gradl, W.; Griessinger, K.; Hafner, A.; Schubert, K. R.; Barlow, R. J.; Lafferty, G. D.; Cenci, R.; Hamilton, B.; Jawahery, A.; Roberts, D. A.; Cowan, R.; Sciolla, G.; Cheaib, R.; Patel, P. M.; Robertson, S. H.; Neri, N.; Palombo, F.; Cremaldi, L.; Godang, R.; Sonnek, P.; Summers, D. J.; Simard, M.; Taras, P.; de Nardo, G.; Onorato, G.; Sciacca, C.; Martinelli, M.; Raven, G.; Jessop, C. P.; Losecco, J. M.; Honscheid, K.; Kass, R.; Feltresi, E.; Margoni, M.; Morandin, M.; Posocco, M.; Rotondo, M.; Simi, G.; Simonetto, F.; Stroili, R.; Akar, S.; Ben-Haim, E.; Bomben, M.; Bonneaud, G. R.; Briand, H.; Calderini, G.; Chauveau, J.; Leruste, Ph.; Marchiori, G.; Ocariz, J.; Biasini, M.; Manoni, E.; Pacetti, S.; Rossi, A.; Angelini, C.; Batignani, G.; Bettarini, S.; Carpinelli, M.; Casarosa, G.; Cervelli, A.; Chrzaszcz, M.; Forti, F.; Giorgi, M. A.; Lusiani, A.; Oberhof, B.; Paoloni, E.; Perez, A.; Rizzo, G.; Walsh, J. J.; Lopes Pegna, D.; Olsen, J.; Smith, A. J. S.; Faccini, R.; Ferrarotto, F.; Ferroni, F.; Gaspero, M.; Li Gioi, L.; Pilloni, A.; Piredda, G.; Bünger, C.; Dittrich, S.; Grünberg, O.; Hess, M.; Leddig, T.; Voß, C.; Waldi, R.; Adye, T.; Olaiya, E. O.; Wilson, F. F.; Emery, S.; Vasseur, G.; Anulli, F.; Aston, D.; Bard, D. J.; Cartaro, C.; Convery, M. R.; Dorfan, J.; Dubois-Felsmann, G. P.; Dunwoodie, W.; Ebert, M.; Field, R. C.; Fulsom, B. G.; Graham, M. T.; Hast, C.; Innes, W. R.; Kim, P.; Leith, D. W. G. S.; Lewis, P.; Lindemann, D.; Luitz, S.; Luth, V.; Lynch, H. L.; Macfarlane, D. B.; Muller, D. R.; Neal, H.; Perl, M.; Pulliam, T.; Ratcliff, B. N.; Roodman, A.; Salnikov, A. A.; Schindler, R. H.; Snyder, A.; Su, D.; Sullivan, M. K.; Va'Vra, J.; Wisniewski, W. J.; Wulsin, H. W.; Purohit, M. V.; White, R. M.; Wilson, J. R.; Randle-Conde, A.; Sekula, S. J.; Bellis, M.; Burchat, P. R.; Puccio, E. M. T.; Alam, M. S.; Ernst, J. A.; Gorodeisky, R.; Guttman, N.; Peimer, D. R.; Soffer, A.; Spanier, S. M.; Ritchie, J. L.; Ruland, A. M.; Schwitters, R. F.; Wray, B. C.; Izen, J. M.; Lou, X. C.; Bianchi, F.; de Mori, F.; Filippi, A.; Gamba, D.; Lanceri, L.; Vitale, L.; Martinez-Vidal, F.; Oyanguren, A.; Villanueva-Perez, P.; Albert, J.; Banerjee, Sw.; Beaulieu, A.; Bernlochner, F. U.; Choi, H. H. F.; King, G. J.; Kowalewski, R.; Lewczuk, M. J.; Lueck, T.; Nugent, I. M.; Roney, J. M.; Sobie, R. J.; Tasneem, N.; Gershon, T. J.; Harrison, P. F.; Latham, T. E.; Band, H. R.; Dasu, S.; Pan, Y.; Prepost, R.; Wu, S. L.; Babar Collaboration

    2015-03-01

    Based on a sample of 500 million e+e-→c c ¯ events recorded by the BABAR detector at c.m. energies of close to 10.6 GeV, we report on a study of the decay D0→π-e+νe. We measure the ratio of branching fractions, RD=B (D0→π-e+νe)/B (D0→K-π+)=0.0713 ±0.001 7stat±0.002 4syst , and use the present world average for B (D0→K-π+) to obtain B (D0→π-e+νe)=(2.770 ±0.06 8stat±0.09 2syst±0.03 7ext)×1 0-3 where the third error accounts for the uncertainty on the branching fraction for the reference channel. The measured dependence of the differential branching fraction on q2, the four-momentum transfer squared between the D and the π meson, is compared to various theoretical predictions for the hadronic form factor, f+,Dπ(q2), and the normalization |Vc d| ×f+,Dπ(q2=0 )=0.1374 ±0.003 8stat±0.002 2syst±0.000 9ext . is extracted from a fit to data. Using the most recent LQCD prediction of f+,Dπ(q2=0 )=0.666 ±0.029 , we obtain |Vc d| =0.206 ±0.00 7exp±0.00 9LQCD . Assuming, instead, |Vc d| =|Vu s| =0.2252 ±0.0009 , we obtain f+,Dπ(q2=0 )=0.610 ±0.02 0exp±0.00 5ext . The q2 dependence of f+,Dπ(q2) is compared to a variety of multipole parametrizations. This information is applied to B0→π-e+νe decays and, combined with an earlier B0→π-e+νe measurement by BABAR, is used to derive estimates of |Vu b|.

  13. Theoretical calculation of oxygen equilibrium isotope fractionation factors involving various NOy molecules, radOH, and H2O and its implications for isotope variations in atmospheric nitrate

    NASA Astrophysics Data System (ADS)

    Walters, Wendell W.; Michalski, Greg

    2016-10-01

    The oxygen stable isotope composition (δ18O) of nitrogen oxides [NOx = nitric oxide (NO) + nitrogen dioxide (NO2)] and their oxidation products (NOy = NOx + nitric acid (HNO3) + particulate nitrate (p-NO3-) + nitrate radical (NO3) + dinitrogen pentoxide (N2O5) + nitrous acid (HONO) + …) have been shown to be a useful tool for inferring the proportion of NOx that is oxidized by ozone (O3). However, isotopic fractionation processes may have an influence on δ18O of various NOy molecules and other atmospheric O-bearing molecules pertinent to NOx oxidation chemistry. Here we have evaluated the impacts of O isotopic exchange involving NOy molecules, the hydroxyl radical (radOH), and water (H2O) using reduced partition function ratios (xβ) calculated by hybrid density functional theory. Assuming atmospheric isotopic equilibrium is achieved between NO and NO2 during the daytime, and NO2, NO3, and N2O5 during the nighttime, δ18O-δ15N compositions were predicted for the major atmospheric nitrate formation pathways using our calculated exchange fractionation factors and isotopic mass-balance. Our equilibrium model predicts that various atmospheric nitrate formation pathways, including NO2 + radOH → HNO3, N2O5 + H2O + surface → 2HNO3, and NO3 + R → HNO3 + Rrad will yield distinctive δ18O-δ15N compositions. Our calculated δ18O-δ15N compositions match well with previous atmospheric nitrate measurements, and will potentially help better understand the role oxidation chemistry plays on the N and O isotopic composition of atmospheric nitrate.

  14. Prognostic usefulness of insulin-like growth factor-binding protein 7 in heart failure with reduced ejection fraction: a novel biomarker of myocardial diastolic function?

    PubMed

    Gandhi, Parul U; Gaggin, Hanna K; Sheftel, Alex D; Belcher, Arianna M; Weiner, Rory B; Baggish, Aaron L; Motiwala, Shweta R; Liu, Peter P; Januzzi, James L

    2014-11-15

    Insulin-like growth factor-binding protein 7 (IGFBP7) is a biomarker that has recently been associated with heart failure and cardiac hypertrophy. The aim of this study was to examine IGFBP7 relative to echocardiographic abnormalities reflecting diastolic dysfunction. One hundred twenty-four patients with ambulatory heart failure with reduced ejection fraction and baseline detailed 2-dimensional echocardiograms were followed for a mean of 10 months. IGFBP7 was measured serially at each office visit; 108 patients underwent follow-up echocardiography. Echocardiographic parameters of diastolic function were compared at baseline and over time. IGFBP7 concentrations were not linked to left ventricular size or systolic function. In contrast, those with elevated baseline IGFBP7 concentrations were more likely to have abnormalities of parameters describing diastolic function, such as higher left atrial volume index, transmitral E/A ratio, E/E' ratio, and right ventricular systolic pressure. IGFBP7 was correlated with left atrial volume index (ρ = 0.237, p = 0.008), transmitral E/A ratio (ρ = 0.304, p = 0.001), E/E' ratio (ρ = 0.257, p = 0.005), and right ventricular systolic pressure (ρ = 0.316, p = 0.001). Furthermore, each was found to be independently predictive of IGFBP7 in adjusted analysis. In subjects with baseline and final echocardiograms, more time spent with elevated IGFBP7 concentrations in serial measurement was associated with worsening diastolic function and increasing left atrial volume index or right ventricular systolic pressure. IGFBP7 concentrations were predictive of an increased risk for cardiovascular events independent of echocardiographic measures of diastolic function (p = 0.006). In conclusion, IGFBP7 is a novel prognostic biomarker for heart failure with reduced ejection fraction and shows significant links to the presence and severity of echocardiographic parameters of abnormal diastolic function.

  15. Seasonal Variation of Unattached fraction and Equilibrium factor of 222Rn and 220Rn using DRPS/DTPS and Pin -hole cup dosimeters.

    NASA Astrophysics Data System (ADS)

    Bangotra, P.; Mehra, R.; Jakhu, R.

    2015-12-01

    222Rn (Radon), 220Rn (Thoron) and their progenies are naturally occurring radionuclides in environment and responsible for the radiological dose to population. The 222Rn, 220Rn concentration and their separate attached and unattached progeny concentration (season-wise) in units of EEC have been measured in the dwellings of Muktsar and Mansa districts of Punjab (India), using Pin- hole cup dosimeters and deposition based progeny sensors (DTPS/DRPS). The indoor 222Rn concentration was maximum in the rainy season (60 Bqm-3) while 220Rn concentration was maximum in winter season (57 Bqm-3). However EEC of 222Rn and 220Rn has distinct seasonal demeanour than their parent nuclides. The unattached EEC for both 222Rn and 220Rn (EERCU and EETCU) were higher in summer and rainy season as compared to winter season. The equilibrium factor ( for 222Rn and for 220Rn) and unattached fraction ( for 222Rn and for 220Rn) has been calculated separately. The (0.44 ± 0.04) in the studied area was similar to 0.4 that proposed by UNSCEAR and for (0.05 ± 0.01) it was greater than specified value 0.02 by UNSCEAR. The was higher in summer season as compared to rainy and winter season. Due to very smaller value of , a proper relation has not been observed seasonally. The unattached fraction in environment may increase the risk of radiological exposure and absorbed at faster rate into blood then the attached 222Rn and 220Rn progeny. The overall arithmetic mean (rainy, winter and summer seasons) of and were 0.09 ± 0.02 and 0.10 ± 0.03 respectively. The and were lower in winter season as compared to rainy and summer seasons due to higher value of attached EEC present in winter season. A positive and significant correlation (0.56) has been observed between the and aerosol concentration (Z (cm-3)).

  16. Chromatographic methods of fractionation.

    PubMed

    Friesen, A D

    1987-01-01

    Chromatography's functional versatility, separation efficiency, gentle non-denaturing separating process and ease of automation and scale-up make it attractive for industrial scale protein purification. The Winnipeg Rh Institute's new Plasma Fractionation facility is an example of the use of chromatography for the large scale purification of plasma protein fractions. The fractionation facility has a capacity to process 800 litres of plasma per batch into blood clotting factor VIII and IX, albumin and intravenous immune serum globulin (i.v. ISG). Albumin and i.v. ISG are purified using ion exchange columns of DEAE-Sepharose (230 litre size), DEAE-Biogel (150 litre size) and CM-Sepharose (150 litre size). The chromatographic process is automated using a Modicon 584 Programmable Logic Controller to regulate valves, pumps and sensors which control plasma flow during fractionation. The stainless steel tanks and piping are automatically cleaned-in-place. The high degree of automation and cleaning provides efficient operation and sanitary processing. Chromatographic methods (DEAE-Sepharose and metal chelation) are also being used at the pilot scale to purify the human blood products superoxide dismutase and hemoglobin from outdated red blood cells. Characterization of the protein fractions produced by chromatography has shown them to be of equal or higher quality than fractions produced by other techniques.

  17. Chesapeake Bay Watershed - Protecting the Chesapeake Bay and its rivers through science, restoration, and partnership

    USGS Publications Warehouse

    ,

    2012-01-01

    The Chesapeake Bay, the Nation's largest estuary, has been degraded due to the impact of human-population increase, which has doubled since 1950, resulting in degraded water quality, loss of habitat, and declines in populations of biological communities. Since the mid-1980s, the Chesapeake Bay Program (CBP), a multi-agency partnership which includes the Department of Interior (DOI), has worked to restore the Bay ecosystem. The U.S. Geological Survey (USGS) has the critical role of providing unbiased scientific information that is utilized to document and understand ecosystem change to help assess the effectiveness of restoration strategies in the Bay and its watershed. The USGS revised its Chesapeake Bay science plan for 2006-2011 to address the collective needs of the CBP, DOI, and USGS with a mission to provide integrated science for improved understanding and management of the Bay ecosystem. The USGS science themes for this mission are: Causes and consequences of land-use change; Impact of climate change and associated hazards; Factors affecting water quality and quantity; Ability of habitat to support fish and bird populations; and Synthesis and forecasting to improve ecosystem assessment, conservation, and restoration.

  18. Intracellular Cadmium Isotope Fractionation

    NASA Astrophysics Data System (ADS)

    Horner, T. J.; Lee, R. B.; Henderson, G. M.; Rickaby, R. E.

    2011-12-01

    Recent stable isotope studies into the biological utilization of transition metals (e.g. Cu, Fe, Zn, Cd) suggest several stepwise cellular processes can fractionate isotopes in both culture and nature. However, the determination of fractionation factors is often unsatisfactory, as significant variability can exist - even between different organisms with the same cellular functions. Thus, it has not been possible to adequately understand the source and mechanisms of metal isotopic fractionation. In order to address this problem, we investigated the biological fractionation of Cd isotopes within genetically-modified bacteria (E. coli). There is currently only one known biological use or requirement of Cd, a Cd/Zn carbonic anhydrase (CdCA, from the marine diatom T. weissfloggii), which we introduce into the E. coli genome. We have also developed a cleaning procedure that allows for the treating of bacteria so as to study the isotopic composition of different cellular components. We find that whole cells always exhibit a preference for uptake of the lighter isotopes of Cd. Notably, whole cells appear to have a similar Cd isotopic composition regardless of the expression of CdCA within the E. coli. However, isotopic fractionation can occur within the genetically modified E. coli during Cd use, such that Cd bound in CdCA can display a distinct isotopic composition compared to the cell as a whole. Thus, the externally observed fractionation is independent of the internal uses of Cd, with the largest Cd isotope fractionation occurring during cross-membrane transport. A general implication of these experiments is that trace metal isotopic fractionation most likely reflects metal transport into biological cells (either actively or passively), rather than relating to expression of specific physiological function and genetic expression of different metalloenzymes.

  19. Module bay with directed flow

    DOEpatents

    Torczynski, John R.

    2001-02-27

    A module bay requires less cleanroom airflow. A shaped gas inlet passage can allow cleanroom air into the module bay with flow velocity preferentially directed toward contaminant rich portions of a processing module in the module bay. Preferential gas flow direction can more efficiently purge contaminants from appropriate portions of the module bay, allowing a reduced cleanroom air flow rate for contaminant removal. A shelf extending from an air inlet slit in one wall of a module bay can direct air flowing therethrough toward contaminant-rich portions of the module bay, such as a junction between a lid and base of a processing module.

  20. 33 CFR 100.124 - Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... South Bay Cross Bay Swim, Great South Bay, New York. 100.124 Section 100.124 Navigation and Navigable... NAVIGABLE WATERS § 100.124 Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York... swimmer or safety craft on the swim event race course bounded by the following points: Starting Point...

  1. 75 FR 29891 - Special Local Regulation; Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-28

    ... South Bay Cross Bay Swim, Great South Bay, NY AGENCY: Coast Guard, DHS. ACTION: Final rule. SUMMARY: The... Fischer Memorial Great South Bay Cross Bay Swim. This special local regulation is necessary to protect... Swim, Great South Bay, NY, in the Federal Register (74 FR 32428). We did not receive any comments...

  2. 33 CFR 100.124 - Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... South Bay Cross Bay Swim, Great South Bay, New York. 100.124 Section 100.124 Navigation and Navigable... NAVIGABLE WATERS § 100.124 Maggie Fischer Memorial Great South Bay Cross Bay Swim, Great South Bay, New York... swimmer or safety craft on the swim event race course bounded by the following points: Starting Point...

  3. Influence of net freshwater supply on salinity in Florida Bay

    USGS Publications Warehouse

    Nuttle, W.K.; Fourqurean, J.W.; Cosby, B.J.; Zieman, J.C.; Robblee, M.B.

    2000-01-01

    An annual water budget for Florida Bay, the large, seasonally hypersaline estuary in the Everglades National Park, was constructed using physically based models and long-term (31 years) data on salinity, hydrology, and climate. Effects of seasonal and interannual variations of the net freshwater supply (runoff plus rainfall minus evaporation) on salinity variation within the bay were also examined. Particular attention was paid to the effects of runoff, which are the focus of ambitious plans to restore and conserve the Florida Bay ecosystem. From 1965 to 1995 the annual runoff from the Everglades into the bay was less than one tenth of the annual direct rainfall onto the bay, while estimated annual evaporation slightly exceeded annual rainfall. The average net freshwater supply to the bay over a year was thus approximately zero, and interannual variations in salinity appeared to be affected primarily by interannual fluctuations in rainfall. At the annual scale, runoff apparently had little effect on the bay as a whole during this period. On a seasonal basis, variations in rainfall, evaporation, and runoff were not in phase, and the net freshwater supply to the bay varied between positive and negative values, contributing to a strong seasonal pattern in salinity, especially in regions of the bay relatively isolated from exchanges with the Gulf of Mexico and Atlantic Ocean. Changes in runoff could have a greater effect on salinity in the bay if the seasonal patterns of rainfall and evaporation and the timing of the runoff are considered. One model was also used to simulate spatial and temporal patterns of salinity responses expected to result from changes in net freshwater supply. Simulations in which runoff was increased by a factor of 2 (but with no change in spatial pattern) indicated that increased runoff will lower salinity values in eastern Florida Bay, increase the variability of salinity in the South Region, but have little effect on salinity in the Central

  4. Bay11-7082 attenuates neuropathic pain via inhibition of nuclear factor-kappa B and nucleotide-binding domain-like receptor protein 3 inflammasome activation in dorsal root ganglions in a rat model of lumbar disc herniation

    PubMed Central

    Zhang, Ailiang; Wang, Kun; Ding, Lianghua; Bao, Xinnan; Wang, Xuan; Qiu, Xubin; Liu, Jinbo

    2017-01-01

    Lumbar disc herniation (LDH) is an important cause of radiculopathy, but the underlying mechanisms are incompletely understood. Many studies suggested that local inflammation, rather than mechanical compression, results in radiculopathy induced by LDH. On the molecular and cellular level, nuclear factor-kappa B (NF-κB) and nucleotide-binding domain-like receptor protein 3 (NLRP3) inflammasome have been implicated in the regulation of neuroinflammation formation and progression. In this study, the autologous nucleus pulposus (NP) was implanted in the left L5 dorsal root ganglion (DRG) to mimic LDH in rats. We investigated the expression of NF-κB and the components of NLRP3 inflammasome in the DRG neurons in rats. Western blotting and immunofluorescence for the related molecules, including NLRP3, apoptosis-associated speck-like protein containing caspase-1 activator domain (ASC), caspase-1, interleukin (IL)-1β, IL-18, IκBα, p-IκBα, p65, p-p65, and calcitonin gene-related peptide (CGRP) were examined. In the NP-treated group, the activations of NLRP3, ASC, caspase-1, IL-1β, IL-18, p-IκBα, and p-p65 in DRG neurons in rats were elevated at 1 day after surgery, and the peak occurred at 7 days. Treatment with Bay11-7082, an inhibitor of the actions of IKK-β, was able to inhibit expression and activation of the molecules (NLRP3, ASC, caspase-1, IL-1β, IL-18, p-IκBα, and p-p65) and relieve the pain in rats. Our study shows that NF-κB and NLRP3 inflammasome are involved in the maintenance of NP-induced pain, and that Bay11-7082 could alleviate mechanical allodynia and thermal hyperalgesia by inhibiting NF-κB and NLRP3 inflammasome activation. PMID:28243141

  5. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds

    SciTech Connect

    Davis, J.A.; Looker, R.E.; Yee, D.; Marvin-Di Pasquale, M.; Austin, C.M.; McKee, L.J.; Greenfield, B.K.; Brodberg, R.; Blum, J.D.

    2012-11-15

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  6. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds.

    PubMed

    Davis, J A; Looker, R E; Yee, D; Marvin-Di Pasquale, M; Grenier, J L; Austin, C M; McKee, L J; Greenfield, B K; Brodberg, R; Blum, J D

    2012-11-01

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  7. Reducing Methylmercury Accumulation in the Food Webs of San Francisco Bay and Its Local Watersheds

    PubMed Central

    Davis, J.A.; Looker, R.E.; Yee, D.; Marvin-DiPasquale, M.; Grenier, J.L.; Austin, C.M.; McKee, L.J.; Greenfield, B.K.; Brodberg, R.; Blum, J.D.

    2013-01-01

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  8. Chesapeake Bay Program Grant Guidance

    EPA Pesticide Factsheets

    Grant Guidance and appendices for the Chesapeake Bay Program that describes how the U.S. Environmental Protection Agency’s (EPA) Region 3’s Chesapeake Bay Program Office (CBPO) administers grant and cooperative agreement funds.

  9. The δ13C evolution of cave drip water along discreet flow paths in a central Texas cave: Quantifying kinetic isotope fractionation factors

    NASA Astrophysics Data System (ADS)

    Mickler, P. J.; Carlson, P. E.; Banner, J.; Breecker, D.; Stern, L. A.; Baseman, A.

    2015-12-01

    Gaps remain in our understanding of in-cave processes that influence cave water chemistry during speleothem formation. Quantifying environmental controls on the isotopic and chemical evolution of karst groundwater would improve the accuracy of speleothem-based paleoclimate reconstructions. In this study, drip water chemical evolution along flow paths was sampled monthly at two locations in Inner Space Cavern, Texas, over a period of 8 months. In each of the two locations, cave water drips off a stalactite, flows along a flowstone and subsequently drips off a lower stalactite, allowing cave water to be sampled at two points, 1-2 meters apart, along each flow path. The chemical and isotopic evolution of drip water along its flow path shows seasonality, where 1) summer months (high cave-air pCO2) have small variations in δ13C values along the flow paths, high and relatively invariant DIC and Ca values,; and 2) winter months (low cave-air pCO2) generally have large increases in DIC δ13C values along the flow paths, lower DIC and Ca values. The magnitude of the increase in DIC δ13C values along the flow paths, <~1‰ to ~4‰, is controlled by the extent of DIC loss to CO2 degassing and calcite precipitation which is controlled by the pCO2 gradient between drip water and cave air. If the DIC loss is less than 15%, then the evolution of the δ13C value of the DIC reservoir can be modelled using a Rayleigh distillation model and equilibrium fractionation factors between (CO2(g)-HCO3-(aq)) and (CaCO3-HCO3-(aq)). As the loss of the DIC reservoir increases above 15% the DIC δ13C values become progressively higher such that the ɛ (CO2(g)-HCO3-(aq)) values needed to model the observed results change from equilibrium values of ~8‰ to non-equilibrium values up to ~25‰. The variance in magnitude of carbon isotope fractionation during CO2 degassing cannot be attributed to changes in temperature, and thus we infer significant kinetic isotope effects at higher rates of DIC

  10. Mobile Bay turbidity study

    NASA Technical Reports Server (NTRS)

    Crozier, G. F.; Schroeder, W. W.

    1978-01-01

    The termination of studies carried on for almost three years in the Mobile Bay area and adjacent continental shelf are reported. The initial results concentrating on the shelf and lower bay were presented in the interim report. The continued scope of work was designed to attempt a refinement of the mathematical model, assess the effectiveness of optical measurement of suspended particulate material and disseminate the acquired information. The optical characteristics of particulate solutions are affected by density gradients within the medium, density of the suspended particles, particle size, particle shape, particle quality, albedo, and the angle of refracted light. Several of these are discussed in detail.

  11. Fractionally charged skyrmions in fractional quantum Hall effect.

    PubMed

    Balram, Ajit C; Wurstbauer, U; Wójs, A; Pinczuk, A; Jain, J K

    2015-11-26

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.

  12. Fractionally charged skyrmions in fractional quantum Hall effect

    SciTech Connect

    Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

    2015-11-26

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.

  13. Salinity pathways between Arabian Sea and Bay of Bengal

    NASA Astrophysics Data System (ADS)

    Krishna Kailasam, Muni

    2016-07-01

    Surface as well as subsurface salinity are highly heterogeneous in the Arabian Sea and the Bay of Bengal. Due to the strong seasonal reversal of currents in the two seas tremendous salt exchange occurred. The present study focuses on the exchange of salt between the Arabian Sea and Bay of Bengal by using remote sensing observations like SMOS and Aquarius. Inflow of high salinity water from the central Arabians Sea into the south Bay of Bengal is significant and occurs during August-September. Freshwater transport out of the Bay of Bengal is southward throughout the year along the along the east coast of the Indian sub-continent. Only a small fraction of low salinity water is advected into the eastern Arabian Sea from the Bay of Bengal. The pathways of salinity between the two seas are also examined using SODA data. It shows that relatively low salinity Bay of Bengal water is transported southward across the equator throughout the year. A considerable southward cross-equatorial exchange of Arabian Sea water occurs during the southwest monsoon season.

  14. A fraction of the transcription factor TAF15 participates in interactions with a subset of the spliceosomal U1 snRNP complex.

    PubMed

    Leichter, Michael; Marko, Marija; Ganou, Vassiliki; Patrinou-Georgoula, Meropi; Tora, László; Guialis, Apostolia

    2011-12-01

    RNA/ssDNA-binding proteins comprise an emerging class of multifunctional proteins with an anticipated role in coupling transcription with RNA processing. We focused here on the highly related transcription factors of the TET sub-class: TLS/FUS, EWS and in particular the least studied member TAF15. An extensive array of immunoprecipitation studies on differentially extracted HeLa nuclei revealed the specific association of TAF15 with the spliceosomal U1 snRNP complex, as deduced by the co-precipitating U1 snRNA, U1-70K and Sm proteins. Additionally, application of anti-U1 RNP autoantibodies identified TAF15 in the immunoprecipitates. Minor fractions of nuclear TAF15 and U1 snRNP were involved in this association. Pull-down assays using recombinant TAF15 and U1 snRNP-specific proteins (U1-70K, U1A and U1C) provided in vitro evidence for a direct protein-protein interaction between TAF15 and U1C, which required the N-terminal domain of TAF15. The ability of TAF15 to directly contact RNA, most likely RNA pol II transcripts, was supported by in vivo UV cross-linking studies in the presence of α-amanitin. By all findings, the existence of a functionally discrete subset of U1 snRNP in association with TAF15 was suggested and provided further support for the involvement of U1 snRNP components in early steps of coordinated gene expression.

  15. Chesapeake Bay Critters

    ERIC Educational Resources Information Center

    Mackay-Atha, Lynne

    2005-01-01

    When students enter the author's classroom on the first day of school, they are greeted with live crabs scuttling around in large bins. The crabs are her way of grabbing students' attention and launching the unit on the Chesapeake Bay watershed. She chooses to start the year with this unit because, despite the fact that the Potomac River can be…

  16. Yaquina Bay Topobathy DEM

    EPA Science Inventory

    The U.S.EPA contracted with the U.S.ACE to obtain intertidal and subtidal bathymetric soundings of Yaquina Bay between Poole Slough and the South Beach Marina in 2002. These data were compiled with U.S.ACE subtidal soundings from 1999, 1998, 2000 and National Ocean Service soundi...

  17. On optimal Bayes detection

    SciTech Connect

    Nielsen, P. |

    1991-08-12

    The following is intended to be a short introduction to the design and analysis of a Bayes-optimal detector, and Middleton`s Locally Optimum Bayes Detector (LOBD). The relationship between these two detectors is clarified. There are three examples of varying complexity included to illustrate the design of these detectors. The final example illustrates the difficulty involved in choosing the bias function for the LOBD. For the examples, the corrupting noise is Gaussian. This allows for a relatively easy solution to the optimal and the LOBD structures. As will be shown, for Bayes detection, the threshold is determined by the costs associated with making a decision and the a priori probabilities of each hypothesis. The threshold of the test cannot be set by simulation. One will notice that the optimal Bayes detector and the LOBD look very much like the Neyman-Pearson optimal and locally optimal detectors respectively. In the latter cases though, the threshold is set by a constraint on the false alarm probability. Note that this allows the threshold to be set by simulation.

  18. On optimal Bayes detection

    SciTech Connect

    Nielsen, P. Arizona Univ., Tucson, AZ . Dept. of Electrical and Computer Engineering)

    1991-08-12

    The following is intended to be a short introduction to the design and analysis of a Bayes-optimal detector, and Middleton's Locally Optimum Bayes Detector (LOBD). The relationship between these two detectors is clarified. There are three examples of varying complexity included to illustrate the design of these detectors. The final example illustrates the difficulty involved in choosing the bias function for the LOBD. For the examples, the corrupting noise is Gaussian. This allows for a relatively easy solution to the optimal and the LOBD structures. As will be shown, for Bayes detection, the threshold is determined by the costs associated with making a decision and the a priori probabilities of each hypothesis. The threshold of the test cannot be set by simulation. One will notice that the optimal Bayes detector and the LOBD look very much like the Neyman-Pearson optimal and locally optimal detectors respectively. In the latter cases though, the threshold is set by a constraint on the false alarm probability. Note that this allows the threshold to be set by simulation.

  19. Recent climate trends, Glacier Bay, Alaska

    NASA Astrophysics Data System (ADS)

    Kopczynski, S. E.; Bigl, S. R.; Lawson, D. E.; Finnegan, D. C.

    2003-12-01

    Glaciers and ice caps respond to changes in regional climate at decadal scales and can thus serve as indicators of regional climate change. Many of the tidewater and terrestrial glaciers in Glacier Bay, Alaska have been in a state of rapid retreat since the late 1700s, with highly disparate rates of recession occurring in the western versus eastern arms, yet the combination of environmental and glaciological factors that must exist to catalyze these rapid changes is not clearly understood. The Cold Regions Research and Engineering Laboratory (CRREL) initiated the first systematic analyses of weather and precipitation patterns across Glacier Bay National Park in 2000 by establishing 26 meteorological stations with the long-term objective of better understanding regional and global factors, that control terrestrial and marine physical systems. Initial temperature and precipitation trends show rapid seasonal and annual shifts. This is consistent with apparent paleo-trends in climate and glacier advance and recession over the last 9K years, as well as the historical record that indicate the area is climatically sensitive. Comparisons of summer and winter precipitation totals show a precipitation gradient increasing northward from the lower bay to the head of Muir Inlet (east arm), and decreasing northwestward in the West Arm. Monthly averages of air temperatures span about 3.5 C between the warmest and coldest sites near sea level. Winter temperatures averaged more than 1 C colder in the West Arm than the East. We also found large gradients of increasing rainfall from north to south in the east arm, from north to south in the Western arm. Average temperatures in October decreased westward in the northern half of the Park and were milder at sites within the larger southern Bay. Continuing a long-term climate-monitoring program in Glacier Bay will assist with quantifying climate trends in the context of glacial movement, helping to determine the overall sensitivity of

  20. Effect of food, an antacid, and the H2 antagonist ranitidine on the absorption of BAY 59-7939 (rivaroxaban), an oral, direct factor Xa inhibitor, in healthy subjects.

    PubMed

    Kubitza, Dagmar; Becka, Michael; Zuehlsdorf, Michael; Mueck, Wolfgang

    2006-05-01

    To investigate the influence of food and administration of an antacid (aluminum-magnesium hydroxide) or ranitidine on the absorption of BAY 59-7939 (rivaroxaban), 4 randomized studies were performed in healthy male subjects. In 2 food interaction studies, subjects received BAY 59-7939, either as two 5-mg tablets (fasted and fed), four 5-mg tablets (fasted), or one 20-mg tablet (fasted and fed). In 2 drug interaction studies, BAY 59-7939 (six 5-mg tablets) was given alone or with ranitidine (150 mg twice daily, preceded by a 3-day pretreatment phase) or antacid (10 mL). Plasma samples were obtained to assess pharmacokinetic and pharmacodynamic parameters of BAY 59-7939. In the presence of food, time to maximum concentration (t(max)) was delayed by 1.25 hours; maximum concentration (C(max)) and area under the curve (AUC) were increased, with reduced interindividual variability at higher doses of BAY 59-7939. Compared with baseline, BAY 59-7939 resulted in a relative increase in maximum prothrombin time (PT) prolongation of 44% (10 mg) and 53% (20 mg) in the fasted state, compared with 53% and 83% after food. Time to maximum PT prolongation was delayed by 0.5 to 1.5 hours after food, with no relevant influence of food type. No significant difference in C(max) and AUC was observed with coadministration of BAY 59-7939 and ranitidine or antacid.

  1. Factors controlling the chemical composition of colloidal and dissolved fractions in soil solutions and the mobility of trace elements in soils

    NASA Astrophysics Data System (ADS)

    Gangloff, Sophie; Stille, Peter; Schmitt, Anne-Désirée; Chabaux, François

    2016-09-01

    The objectives of this study were to determine the processes and physico-chemical conditions that affect the composition of the soil solutions of a forest soil and to elucidate their impact on the transport of major and trace elements through the colloidal (0.2 μm to 5 kDa) and dissolved (<5 kDa) fractions in the first meter of soil. All experiments were performed with soil solutions obtained using lysimeter plates situated on an experimental spruce parcel of the Strengbach catchment (Northeastern France). The surface samples filtered at 0.2 μm facilitated the examination of the influence of litter decomposition on the chemical composition of the upper soil solutions. The impact of the soils biogeochemical conditions (pH, moisture, temperature, oxic or anoxic conditions) on litter decomposition was also examined. More particularly, the increase in NH4+ and NO2- compounds in some of the soil solutions points to denitrification processes in an anoxic environment. Thus, under anoxic conditions, the soil solution is enriched in Ca, P, Mn and Zn, whereas under oxic conditions it is enriched in Al and Fe. The physico-chemical conditions are more seasonally dependent in the upper soil horizons than in the deeper ones and have an impact on the variability of the chemical composition of the soil solutions. The colloidal and dissolved fractions of the soil solutions were obtained by tangential flow ultra-filtration. The experimental results reveal that nutrients, such as NO3- and P, are primarily in the dissolved fraction and consequently bioavailable; secondary minerals may be dissolved and/or precipitate in the colloidal fraction, such as pyromorphite (Pb5(PO4)3(OH, Cl, F)). The results further indicate that microbial activity influences the composition of the colloidal and dissolved fractions, and possibly enriches the colloidal fraction in Ca, Mn and P, diminishes the concentrations of Pb, V, Cr and Fe in the dissolved fraction, and changes the structure of organic

  2. Predictability of Vibrio cholerae in Chesapeake Bay

    PubMed Central

    Louis, Valérie R.; Russek-Cohen, Estelle; Choopun, Nipa; Rivera, Irma N. G.; Gangle, Brian; Jiang, Sunny C.; Rubin, Andrea; Patz, Jonathan A.; Huq, Anwar; Colwell, Rita R.

    2003-01-01

    Vibrio cholerae is autochthonous to natural waters and can pose a health risk when it is consumed via untreated water or contaminated shellfish. The correlation between the occurrence of V. cholerae in Chesapeake Bay and environmental factors was investigated over a 3-year period. Water and plankton samples were collected monthly from five shore sampling sites in northern Chesapeake Bay (January 1998 to February 2000) and from research cruise stations on a north-south transect (summers of 1999 and 2000). Enrichment was used to detect culturable V. cholerae, and 21.1% (n = 427) of the samples were positive. As determined by serology tests, the isolates, did not belong to serogroup O1 or O139 associated with cholera epidemics. A direct fluorescent-antibody assay was used to detect V. cholerae O1, and 23.8% (n = 412) of the samples were positive. V. cholerae was more frequently detected during the warmer months and in northern Chesapeake Bay, where the salinity is lower. Statistical models successfully predicted the presence of V. cholerae as a function of water temperature and salinity. Temperatures above 19°C and salinities between 2 and 14 ppt yielded at least a fourfold increase in the number of detectable V. cholerae. The results suggest that salinity variation in Chesapeake Bay or other parameters associated with Susquehanna River inflow contribute to the variability in the occurrence of V. cholerae and that salinity is a useful indicator. Under scenarios of global climate change, increased climate variability, accompanied by higher stream flow rates and warmer temperatures, could favor conditions that increase the occurrence of V. cholerae in Chesapeake Bay. PMID:12732548

  3. Bayes and the Law

    PubMed Central

    Fenton, Norman; Neil, Martin; Berger, Daniel

    2016-01-01

    Although the last forty years has seen considerable growth in the use of statistics in legal proceedings, it is primarily classical statistical methods rather than Bayesian methods that have been used. Yet the Bayesian approach avoids many of the problems of classical statistics and is also well suited to a broader range of problems. This paper reviews the potential and actual use of Bayes in the law and explains the main reasons for its lack of impact on legal practice. These include misconceptions by the legal community about Bayes’ theorem, over-reliance on the use of the likelihood ratio and the lack of adoption of modern computational methods. We argue that Bayesian Networks (BNs), which automatically produce the necessary Bayesian calculations, provide an opportunity to address most concerns about using Bayes in the law. PMID:27398389

  4. Nagoya, Ise Bay, Japan

    NASA Technical Reports Server (NTRS)

    1982-01-01

    This view of Nagoya, Ise Bay and nearby Kyoto, on the main island of Honshu, Japan (35.0N, 137.0E) combines in a single photo both the political, cultural and educational centers of early Japan as well as one of the main educational and business centers of modern Japan. Besides being a business, cultural and educational center, Nagoya is near the geographic center of the Japanese home islands.

  5. Diversity of Denitrifying Bacteria in the San Francisco Bay

    NASA Astrophysics Data System (ADS)

    Atluri, A.; Lee, J.; Francis, C. A.

    2012-12-01

    We compared the diversity of communities of denitrifying bacteria from the San Francisco Bay to investigate whether environmental factors affect diversity. To do this, we studied the sequence diversity of the marker gene nirK. nirK codes for the enzyme nitrite reductase which helps reduce nitrite to nitric oxide, an important step in denitrification. Sediment samples were collected spatially from five different locations and temporally during the four different seasons along a salinity gradient in the bay. After collecting samples and extracting DNA from them, we used PCR to amplify our gene of interest, created clone libraries for sequencing, and compared phylogenetic trees from the different communities. Based on several phylogenetic analyses on our tree and environments, we saw that denitrifying bacteria from the North and Central Bay form distinct spatial clusters; Central Bay communities are very similar to each other, while communities from the North Bay are more distinct from each other and from communities in the Central Bay. Bacteria from site 8.1M (Carquinez Strait) showed the most cm-scale spatial diversity, and there was the most species richness during the winter. All this suggests that diversity of communities of denitrifying bacteria may be affected by spatial and temporal environmental factors.

  6. Bed composition generation for morphodynamic modeling: Case study of San Pablo Bay in California, USA

    USGS Publications Warehouse

    van der Wegen, M.; Dastgheib, A.; Jaffe, B.E.; Roelvink, D.

    2011-01-01

    Applications of process-based morphodynamic models are often constrained by limited availability of data on bed composition, which may have a considerable impact on the modeled morphodynamic development. One may even distinguish a period of "morphodynamic spin-up" in which the model generates the bed level according to some ill-defined initial bed composition rather than describing the realistic behavior of the system. The present paper proposes a methodology to generate bed composition of multiple sand and/or mud fractions that can act as the initial condition for the process-based numerical model Delft3D. The bed composition generation (BCG) run does not include bed level changes, but does permit the redistribution of multiple sediment fractions over the modeled domain. The model applies the concept of an active layer that may differ in sediment composition above an underlayer with fixed composition. In the case of a BCG run, the bed level is kept constant, whereas the bed composition can change. The approach is applied to San Pablo Bay in California, USA. Model results show that the BCG run reallocates sand and mud fractions over the model domain. Initially, a major sediment reallocation takes place, but development rates decrease in the longer term. Runs that take the outcome of a BCG run as a starting point lead to more gradual morphodynamic development. Sensitivity analysis shows the impact of variations in the morphological factor, the active layer thickness, and wind waves. An important but difficult to characterize criterion for a successful application of a BCG run is that it should not lead to a bed composition that fixes the bed so that it dominates the "natural" morphodynamic development of the system. Future research will focus on a decadal morphodynamic hindcast and comparison with measured bathymetries in San Pablo Bay so that the proposed methodology can be tested and optimized. ?? 2010 The Author(s).

  7. Organic Matter Remineralization Predominates Phosphorus Cycling in the Mid-Bay Sediments in the Chesapeake Bay

    SciTech Connect

    Sunendra, Joshi R.; Kukkadapu, Ravi K.; Burdige, David J.; Bowden, Mark E.; Sparks, Donald L.; Jaisi, Deb P.

    2015-05-19

    The Chesapeake Bay, the largest and most productive estuary in the US, suffers from varying degrees of water quality issues fueled by both point and non–point source nutrient sources. Restoration of the bay is complicated by the multitude of nutrient sources, their variable inputs and hydrological conditions, and complex interacting factors including climate forcing. These complexities not only restrict formulation of effective restoration plans but also open up debates on accountability issues with nutrient loading. A detailed understanding of sediment phosphorus (P) dynamics enables one to identify the exchange of dissolved constituents across the sediment- water interface and aid to better constrain mechanisms and processes controlling the coupling between the sediments and the overlying waters. Here we used phosphate oxygen isotope ratios (δ18Op) in concert with sediment chemistry, XRD, and Mössbauer spectroscopy on the sediment retrieved from an organic rich, sulfidic site in the meso-haline portion of the mid-bay to identify sources and pathway of sedimentary P cycling and to infer potential feedback effect on bottom water hypoxia and surface water eutrophication. Isotope data indicate that the regeneration of inorganic P from organic matter degradation (remineralization) is the predominant, if not sole, pathway for authigenic P precipitation in the mid-bay sediments. We interpret that the excess inorganic P generated by remineralization should have overwhelmed any bottom-water and/or pore-water P derived from other sources or biogeochemical processes and exceeded saturation with respect to authigenic P precipitation. It is the first research that identifies the predominance of remineralization pathway against remobilization (coupled Fe-P cycling) pathway in the Chesapeake Bay. Therefore, these results are expected to have significant implications for the current understanding of P cycling and benthic-pelagic coupling in the bay, particularly on the

  8. Minimum Bayes risk image correlation

    NASA Technical Reports Server (NTRS)

    Minter, T. C., Jr.

    1980-01-01

    In this paper, the problem of designing a matched filter for image correlation will be treated as a statistical pattern recognition problem. It is shown that, by minimizing a suitable criterion, a matched filter can be estimated which approximates the optimum Bayes discriminant function in a least-squares sense. It is well known that the use of the Bayes discriminant function in target classification minimizes the Bayes risk, which in turn directly minimizes the probability of a false fix. A fast Fourier implementation of the minimum Bayes risk correlation procedure is described.

  9. USGS Tampa Bay Pilot Study

    USGS Publications Warehouse

    Yates, K.K.; Cronin, T. M.; Crane, M.; Hansen, M.; Nayeghandi, A.; Swarzenski, P.; Edgar, T.; Brooks, G.R.; Suthard, B.; Hine, A.; Locker, S.; Willard, D.A.; Hastings, D.; Flower, B.; Hollander, D.; Larson, R.A.; Smith, K.

    2007-01-01

    Providing a web-based digital information management system of information for scientists and the public, including a system that supports the work of those officials who must make decisions that affect the state of the bay. The Tampa Bay Study is in its sixth year and will continue through September 2007. This paper presents a non-inclusive summary of key findings associated with the six primary project components listed above. Component 4 (above) is described in detail in the following chapter 13. More information on the Tampa Bay Study is available from our on-line digital information system for the Tampa Bay Study at http://gulfsci.usgs.gov.

  10. Enhanced cellular content and lactate fraction of the poly(lactate-co-3-hydroxybutyrate) polyester produced in recombinant Escherichia coli by the deletion of σ factor RpoN.

    PubMed

    Kadoya, Ryosuke; Kodama, Yu; Matsumoto, Ken'ichiro; Taguchi, Seiichi

    2015-04-01

    A new approach at the transcriptional level was applied to lactate-based polyester production. Four σ factor disruptants, ΔrpoN, ΔrpoS, ΔfliA and ΔfecI, of Escherichia coli were used as hosts for poly(lactate-co-3-hydroxybutyrate) production from glucose. Among them, ΔrpoN caused dual positive effects of polymer production, enhanced cellular content and lactate fraction.

  11. Assessment for water quality by artificial neural network in Daya Bay, South China Sea.

    PubMed

    Wu, Mei-Lin; Wang, You-Shao; Gu, Ji-Dong

    2015-10-01

    In this study, artificial neural network such as a self-organizing map (SOM) was used to assess for the effects caused by climate change and human activities on the water quality in Daya Bay, South China Sea. SOM has identified the anthropogenic effects and seasonal characters of water quality. SOM grouped the four seasons as four groups (winter, spring, summer and autumn). The Southeast Asian monsoons, northeasterly from October to the next April and southwesterly from May to September have also an important influence on the water quality in Daya Bay. Spatial pattern is mainly related to anthropogenic activities and hydrodynamics conditions. In spatial characteristics, the water quality in Daya Bay was divided into two groups by chemometrics. The monitoring stations (S3, S8, S10 and S11) were in these area (Dapeng Ao, Aotou Harbor) and northeast parts of Daya Bay, which are areas of human activity. The thermal pollution has been observed near water body in Daya Bay Nuclear Power Plant (S5). The rest of the monitoring sites were in the south, central and eastern parts of Daya Bay, which are areas that experience water exchanges from South China Sea. The results of this study may provide information on the spatial and temporal patterns in Daya Bay. Further research will be carry out more research concerning functional changes in the bay ecology with respect to changes in climatic factor, human activities and bay morphology in Daya Bay.

  12. A review of circulation and mixing studies of San Francisco Bay, California

    USGS Publications Warehouse

    Smith, Lawrence H.

    1987-01-01

    influenced by delta discharge, and South Bay, a tributary estuary which responds to conditions in Central Bay. In the northern reach net circulation is characterized by the river-induced seaward, flow and a resulting gravitational circulation in the channels, and by a tide- and wind-induced net horizontal circulation. A surface layer of relatively fresh water in Central Bay generated by high delta discharges can induce gravitational circulation in South Bay. During low delta discharges South Bay has nearly the same salinity as Central Bay and is characterized by tide- and wind-induced net horizontal circulation. Several factors control the patterns of circulation and mixing in San Francisco Bay. Viewing circulation and mixing over different time-periods and at different geographic scales causes the influences of different factors to be emphasized. The exchange between the bay and coastal ocean and freshwater inflows determine the year-to-year behavior of San Francisco Bay as a freshwater-saltwater mixing zone. Within the bay, exchanges between the embayments control variations over a season. Circulation and mixing patterns within the embayments and the magnitude of river-induced seaward flow influence the between-bay exchanges. The within-bay patterns are in turn determined by tides, winds, and freshwater inflows. Because freshwater inflow is the only factor that can be managed, a major study focus is estimation of inflow-related effects. Most questions relate to the patterns of freshwater inflow necessary to protect valuable resources whose welfare is dependent on conditions in the bay. Among the important questions being addressed are: --What quantity of freshwater inflow is necessary to prevent salt intrusion into the Sacramento-San Joaquin Delta, and what salinity distributions in the bay would result from various inflow patterns? --What quantity of freshwater inflow is sufficient to flush pollutants through the bay? Knowledge of circul

  13. Distribution and geochemical speciation of heavy metals in sediments from coastal area suffered rapid urbanization, a case study of Shantou Bay, China.

    PubMed

    Qiao, Yongmin; Yang, Yang; Gu, Jiguang; Zhao, Jiangang

    2013-03-15

    Eight metals in sediment samples at 15 sites from the Shantou Bay were analyzed with BCR sequential extraction protocol to obtain the metal distribution patterns in the bay. The results showed that the heavy metal pollutions in upper bay were more severe than in middle and down reaches of the bay. Both total and non-residual fractions of metals with a exception of Mn showed a seaward decrease trend. More than 54% of the total concentrations of Cd, Mn and Zn existed in the acid soluble fraction. Ni, Co, Cr and Fe mainly (more than 51%) occurred in the residual fraction. While Pb and Cu dominantly presented in the reducible (50%) and oxidable (33%) fraction respectively. Principal component analysis (PCA) revealed that the heavy metals in the non-residual fractions resulted from largely anthropogenic sources, including river input, city runoff and port discharge. These contributing sources are highlighted by cluster analysis.

  14. The outflow of radionuclides from Novaya Zemlya bays--modeling and monitoring strategies.

    PubMed

    Harms, I H; Povinec, P P

    1999-09-30

    Hydrodynamic model results are used to evaluate possible monitoring strategies for a continuous survey of underwater dump sites. The Hamburg Shelf Ocean Model (HAMSOM) is applied to Abrosimov Bay and forced with realistic, transient wind fields and air temperatures. The three-dimensional circulation model is coupled to a dynamic-thermodynamic ice model that accounts for surface heat fluxes, fractional ice cover and ice thickness. Model results show significant variations in the bay circulation due to a pronounced seasonality in the wind forcing and the ice cover. The circulation is weakest in early summer when wind speeds are low and the ice still covers most parts of the bay. In autumn, circulation and flushing of the bay is most enhanced, due to increasing wind speeds and the absence of an ice cover. Dispersion scenarios were carried out assuming a leakage at dumped objects. During most of the year the obtained tracer concentrations in the bay are higher in the upper layers than close to the bottom, indicating an outflow at the surface and a compensatory inflow below. This general pattern is only reversed during spring and early summer, when the wind directions change. Since ice problems make it almost impossible to monitor surface waters or even the whole water column in a shallow bay, the only way to install a monitoring system, is at the bottom of the bay, as close as possible to dumped objects. Data transmission via satellite or radio could be realized from a small station located on the bay's edge.

  15. Learning on the Big Bay

    ERIC Educational Resources Information Center

    Philp, Michael J.

    1978-01-01

    Anne Arundel Community College uses the Chesapeake Bay for a flexible ocean engineering technology program which includes mechanical, electrical, and environmental options for transfer and/or vocational students, and adult education programs covering such subjects as sailing, Bay history, boat building, scuba-diving, and marine biology. (RT)

  16. Interdisciplinary environmental project probes Chesapeake Bay down to the core

    NASA Astrophysics Data System (ADS)

    Cronin, T.; Colman, S.; Willard, D.; Kerhin, R.; Holmes, C.; Karlsen, A.; Ishman, S.; Bratton, J.

    Interrelated environmental concerns about Chesapeake Bay are being addressed in an interdisciplinary project using paleoecological and geochemical records from sediment cores to investigate Holocene climate and human encroachment. The research is looking at interannual through millennial-scale variability of bay salinity,sediment accumulation, and dissolved oxygen, temperature, and faunal and floral trends. Current and planned research is expected to result in better restoration strategies by improving our understanding of the linkages between the bay's ecosystem, climate, and land use.Chesapeake Bay, the United States' largest and most productive estuary, faces several complex environmental issues, including eutrophication and anoxia in the main channel and tributaries, high turbidity and rates of sedimentation, outbreaks of the toxic dinoflagellate Pfiesteria piscicida, and coastal erosion and submergence tied to sea-level rise. Such problems often are attributed to human activities in the bay's watershed, including pollution, urbanization, and deforestation, but it now is recognized that climatic factors also strongly influence bay salinity, temperature, and water quality.

  17. Bayés syndrome and acute cardioembolic ischemic stroke

    PubMed Central

    Arboix, Adrià; Martí, Lucía; Dorison, Sebastien; Sánchez, María José

    2017-01-01

    Bayés syndrome is an under-recognized clinical condition characterized by advanced interatrial block. Bayés syndrome is a subclinical disease that manifests electrocardiographically as a prolonged P wave duration > 120 ms with biphasic morphology ± in the inferior leads. The clinical relevance of Bayés syndrome lies in the fact that is a clear arrhythmological syndrome and has a strong association with supraventricular arrhythmias, particularly atypical atrial flutter and atrial fibrillation. Likewise, Bayés syndrome has been recently identified as a novel risk factor for non-lacunar cardioembolic ischemic stroke and vascular dementia. Advanced interatrial block can be a risk for embolic stroke due to its known sequelae of left atrial dilation, left atrial electromechanical dysfunction or atrial tachyarrhythmia (paroxysmal or persistent atrial fibrillation), conditions predisposing to thromboembolism. Bayés syndrome may be responsible for some of the unexplained ischemic strokes and shall be considered and investigated as a possible cause for cryptogenetic stroke. In summary, Bayés syndrome is a poorly recognized cardiac rhythm disorder with important cardiologic and neurologic implications. PMID:28352633

  18. The Bayes Inference Engine

    SciTech Connect

    Hanson, K.M.; Cunningham, G.S.

    1996-04-01

    The authors are developing a computer application, called the Bayes Inference Engine, to provide the means to make inferences about models of physical reality within a Bayesian framework. The construction of complex nonlinear models is achieved by a fully object-oriented design. The models are represented by a data-flow diagram that may be manipulated by the analyst through a graphical programming environment. Maximum a posteriori solutions are achieved using a general, gradient-based optimization algorithm. The application incorporates a new technique of estimating and visualizing the uncertainties in specific aspects of the model.

  19. Source identification and assessment of sediment contamination of trace metals in Kogarah Bay, NSW, Australia.

    PubMed

    Alyazichi, Yasir M; Jones, Brian G; McLean, Errol

    2015-02-01

    The distribution of trace metals (spatial and temporal) and sedimentary fractions were investigated to identify the concentrations and sources of trace metals within Kogarah Bay, NSW, Australia. A total of 59 surface sediments and six subsurface samples from core of the sediment were collected. The contamination factor and pollution load index indices used to evaluate environmental effects of trace metals. The study area was found to be uncontaminated with Cr and Ni, moderately contaminated with As and considerably contaminated with Cu, Zn and Pb. The concentrations of Cr and Ni were below both effect range low and effect range median, while As, Cu, Zn and Pb were slightly above effect range low. The highest concentrations of these trace metals such as Cu, Zn and Pb were found in the north, northwest and southeast of the bay, close to discharge points, stormwater outlets and around boatyards and watercrafts. The spatial distributions of metals were strongly related to muddy particles and organic matter. The temporal sediments of metals declined with increased sediment depth, which reflects accumulation of trace metals since European settlement in this area. Furthermore, the source of the trace metals was found to be stormwater outlets, gasoline fumes, boatyards and other human activities.

  20. Uncertainty analysis of fission fraction for reactor antineutrino experiments

    NASA Astrophysics Data System (ADS)

    Ma, X. B.; Lu, F.; Wang, L. Z.; Chen, Y. X.; Zhong, W. L.; An, F. P.

    2016-06-01

    Reactor simulation is an important source of uncertainties for a reactor neutrino experiment. Therefore, how to evaluate the antineutrino flux uncertainty results from reactor simulation is an important question. In this study, a method of the antineutrino flux uncertainty result from reactor simulation was proposed by considering the correlation coefficient. In order to use this method in the Daya Bay antineutrino experiment, the open source code DRAGON was improved and used for obtaining the fission fraction and correlation coefficient. The average fission fraction between DRAGON and SCIENCE code was compared and the difference was less than 5% for all the four isotopes. The uncertainty of fission fraction was evaluated by comparing simulation atomic density of four main isotopes with Takahama-3 experiment measurement. After that, the uncertainty of the antineutrino flux results from reactor simulation was evaluated as 0.6% per core for Daya Bay antineutrino experiment.

  1. Aluminium (Al) fractionation and speciation; getting closer to describing the factors influencing Al(3+) in water impacted by acid mine drainage.

    PubMed

    Chamier, Jessica; Wicht, Merrill; Cyster, Lilburne; Ndindi, Nosintu P

    2015-07-01

    Acid mine drainage (AMD) severely impacts the water chemistry of a receiving resource, changing the occurrence, speciation and toxicity of metals such as Aluminium (Al). The toxicity of Al is determined by its speciation represented by the labile monomer Al fraction or Al(3+). The purpose of the study was to combine fractionation and Visual MINTEQ speciation to calculate the effect of AMD altered water chemistry on Al speciation and Al(3+) concentration. Water in rivers impacted by AMD presented with monomeric Al (Almon) concentrations between 0.35 and 15.37mgL(-)(1) which existed almost exclusively in the toxic labile form (98%). For the reference site, Almon was less than 2% (10μgL(-1)), suggesting significantly lower Al toxicity. Principal component analysis plots illustrated that labile Al was directly related to the total Al and iron concentrations and strongly influenced by parameters such as pH, electrical conductivity, sulphate and dissolved organic carbon. Visual MINTEQ modelling was used to determine the primary Al species distribution. The dominant form of Al in AMD impacted water was AlSO4(+), which increased proportionally with the sulphate and Al(3+) concentration. Heavily impacted areas, presented with an average of 1mgmL(-)(1) Al(3+), which poses a potential human health risk. A novel centrifugal ultrafiltration method was investigated as an alternative to determining Almon to simplify the speciation of Al. Monomeric and centrifugal ultrafiltrated (<10kD) Al fractions were significantly similar (p=0.74), suggesting that ultrafiltration may present a time, energy and cost saving alternative to organic extraction of Almon.

  2. Precise and accurate isotope fractionation factors (α17O, α18O and αD) for water and CaSO4·2H2O (gypsum)

    NASA Astrophysics Data System (ADS)

    Gázquez, Fernando; Evans, Nicholas P.; Hodell, David A.

    2017-02-01

    Gypsum (CaSO4·2H2O) is a hydrated mineral containing crystallization water, also known as gypsum hydration water (GHW). We determined isotope fractionation factors (α17O, α18O and αD) between GHW and free water of the mother solution in the temperature range from 3 °C to 55 °C at different salinities and precipitation rates. The hydrogen isotope fractionation factor (αDgypsum-water) increases by 0.0001 units per °C between 3 °C and 55 °C and salinities <150 g/L of NaCl. The αDgypsum-water is 0.9812 ± 0.0007 at 20 °C, which is in good agreement with previous estimates of 0.981 ± 0.001 at the same temperature. The α18Ogypsum-water slightly decreases with temperature by 0.00001 per °C, which is not significant over much of the temperature range considered for paleoclimate applications. Between 3 °C and 55 °C, α18Ogypsum-water averages 1.0035 ± 0.0002. This value is more precise than that reported previously (e.g. 1.0041 ± 0.0004 at 25 °C) and lower than the commonly accepted value of 1.004. We found that NaCl concentrations below 150 g/L do not significantly affect α18Ogypsum-water, but αDgypsum-water increases linearly with NaCl concentrations even at relatively low salinities, suggesting a salt correction is necessary for gypsum formed from brines. Unlike oxygen isotopes, the αDgypsum-water is affected by kinetic effects that increase with gypsum precipitation rate. As expected, the relationship of the fractionation factors for 17O and 18O follows the theoretical mass-dependent fractionation on Earth (θ = 0.529 ± 0.001). We provide specific examples of the importance of using the revised fractionation factors when calculating the isotopic composition of the fluids.

  3. Fractional vector calculus and fractional Maxwell's equations

    SciTech Connect

    Tarasov, Vasily E.

    2008-11-15

    The theory of derivatives and integrals of non-integer order goes back to Leibniz, Liouville, Grunwald, Letnikov and Riemann. The history of fractional vector calculus (FVC) has only 10 years. The main approaches to formulate a FVC, which are used in the physics during the past few years, will be briefly described in this paper. We solve some problems of consistent formulations of FVC by using a fractional generalization of the Fundamental Theorem of Calculus. We define the differential and integral vector operations. The fractional Green's, Stokes' and Gauss's theorems are formulated. The proofs of these theorems are realized for simplest regions. A fractional generalization of exterior differential calculus of differential forms is discussed. Fractional nonlocal Maxwell's equations and the corresponding fractional wave equations are considered.

  4. Tampa Bay environmental atlas

    SciTech Connect

    Kunneke, J.T.; Palik, T.F.

    1984-12-01

    Biological and water resource data for Tampa Bay were compiled and mapped at a scale of 1:24,000. This atlas consists of (1) composited information overlain on 18 biological and 20 water resource base maps and (2) an accompanying map narrative. Subjects mapped on the water resource maps are contours of the mean middepth specific conductivity which can be converted to salinity; bathymetry, sediments, tidal currents, the freshwater/saltwater interface, dredge spoil disposal sites; locations of industrial and municipal point source discharges, tide stations, and water quality sampling stations. The point source discharge locations show permitted capacity and the water quality sampling stations show 5-year averages for chlorophyll, conductivity, turbidity, temperature, and total nitrogen. The subjects shown on the biological resource maps are clam and oyster beds, shellfish harvest areas, colonial bird nesting sites, manatee habitat, seagrass beds and artificial reefs. Spawning seasons, nursery habitats, and adult habitats are identified for major fish species. The atlas will provide useful information for coastal planning and management in Tampa Bay.

  5. Oxygen isotope fractionation in double carbonates.

    PubMed

    Zheng, Yong-Fei; Böttcher, Michael E

    2016-01-01

    Oxygen isotope fractionations in double carbonates of different crystal structures were calculated by the increment method. Synthesis experiments were performed at 60 °C and 100 °C to determine oxygen and carbon isotope fractionations involving PbMg[CO3]2. The calculations suggest that the double carbonates of calcite structure are systematically enriched in (18)O relative to those of aragonite and mixture structures. Internally consistent oxygen isotope fractionation factors are obtained for these minerals with respect to quartz, calcite and water at a temperature range of 0-1200 °C. The calculated fractionation factors for double carbonate-water systems are generally consistent with the data available from laboratory experiments. The experimentally determined fractionation factors for PbMg[CO3]2, BaMg[CO3]2 and CaMg[CO3]2 against H2O not only fall between fractionation factors involving pure carbonate end-members but are also close to the calculated fractionation factors. In contrast, experimentally determined carbon isotope fractionation factors between PbMg[CO3]2 and CO2 are much closer to theoretical predictions for the cerussite-CO2 system than for the magnesite-CO2 system, similar to the fractionation behavior for BaMg[CO3]2. Therefore, the combined theoretical and experimental results provide insights into the effects of crystal structure and exchange kinetics on oxygen isotope partitioning in double carbonates.

  6. The Use of a Fractional Factorial Design to Determine the Factors That Impact 1,3-Propanediol Production from Glycerol by Halanaerobium hydrogeniformans

    PubMed Central

    Kalia, Shivani; Trager, Jordan; Sitton, Oliver C.; Mormile, Melanie R.

    2016-01-01

    In recent years, biodiesel, a substitute for fossil fuels, has led to the excessive production of crude glycerol. The resulting crude glycerol can possess a high concentration of salts and an alkaline pH. Moreover, current crude glycerol purification methods are expensive, rendering this former commodity a waste product. However, Halanaerobium hydrogeniformans, a haloalkaliphilic bacterium, possesses the metabolic capability to convert glycerol into 1,3-propanediol, a valuable commodity compound, without the need for salt dilution or adjusting pH when grown on this waste. Experiments were performed with different combinations of 24 medium components to determine their impact on the production of 1,3-propanediol by using a fractional factorial design. Tested medium components were selected based on data from the organism’s genome. Analysis of HPLC data revealed enhanced production of 1,3-propanediol with additional glycerol, pH, vitamin B12, ammonium ions, sodium sulfide, cysteine, iron, and cobalt. However, other selected components; nitrate ions, phosphate ions, sulfate ions, sodium:potassium ratio, chloride, calcium, magnesium, silicon, manganese, zinc, borate, nickel, molybdenum, tungstate, copper and aluminum, did not enhance 1,3-propanediol production. The use of a fractional factorial design enabled the quick and efficient assessment of the impact of 24 different medium components on 1,3-propanediol production from glycerol from a haloalkaliphilic bacterium. PMID:27556494

  7. The Use of a Fractional Factorial Design to Determine the Factors That Impact 1,3-Propanediol Production from Glycerol by Halanaerobium hydrogeniformans.

    PubMed

    Kalia, Shivani; Trager, Jordan; Sitton, Oliver C; Mormile, Melanie R

    2016-08-20

    In recent years, biodiesel, a substitute for fossil fuels, has led to the excessive production of crude glycerol. The resulting crude glycerol can possess a high concentration of salts and an alkaline pH. Moreover, current crude glycerol purification methods are expensive, rendering this former commodity a waste product. However, Halanaerobium hydrogeniformans, a haloalkaliphilic bacterium, possesses the metabolic capability to convert glycerol into 1,3-propanediol, a valuable commodity compound, without the need for salt dilution or adjusting pH when grown on this waste. Experiments were performed with different combinations of 24 medium components to determine their impact on the production of 1,3-propanediol by using a fractional factorial design. Tested medium components were selected based on data from the organism's genome. Analysis of HPLC data revealed enhanced production of 1,3-propanediol with additional glycerol, pH, vitamin B12, ammonium ions, sodium sulfide, cysteine, iron, and cobalt. However, other selected components; nitrate ions, phosphate ions, sulfate ions, sodium:potassium ratio, chloride, calcium, magnesium, silicon, manganese, zinc, borate, nickel, molybdenum, tungstate, copper and aluminum, did not enhance 1,3-propanediol production. The use of a fractional factorial design enabled the quick and efficient assessment of the impact of 24 different medium components on 1,3-propanediol production from glycerol from a haloalkaliphilic bacterium.

  8. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel may...) Each vessel must keep to the center, except when meeting or overtaking another vessel. (b) In...

  9. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel may...) Each vessel must keep to the center, except when meeting or overtaking another vessel. (b) In...

  10. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel may...) Each vessel must keep to the center, except when meeting or overtaking another vessel. (b) In...

  11. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel may...) Each vessel must keep to the center, except when meeting or overtaking another vessel. (b) In...

  12. 33 CFR 162.125 - Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Sturgeon Bay and the Sturgeon Bay... Sturgeon Bay and the Sturgeon Bay Ship Canal, Wisc. (a) In the Sturgeon Bay Ship Canal: (1) No vessel may...) Each vessel must keep to the center, except when meeting or overtaking another vessel. (b) In...

  13. Assessing change of environmental dynamics by legislation in Japan, using red tide occurrence in Ise Bay as an indicator.

    PubMed

    Suzuki, Chika

    2016-01-30

    Tokyo Bay, Ise Bay, and the Seto Inland Sea are the total pollutant load control target areas in Japan. A significant correlation between the incidence of red tides and water quality has been observed in the Seto Inland Sea (Honjo, 1991). However, while red tides also occur in Ise Bay and Tokyo Bay, similar correlations have not been observed. Hence, it is necessary to understand what factors cause red tides to effectively manage these semi-closed systems. This study aims to investigate the relationship between the dynamics of the Red Tide Index and nitrogen regulation as well as phosphorus regulation, even in Ise Bay where, unlike Tokyo Bay, there are few observation items, by selecting a suitable objective variable. The introduction of a new technique that uses the Red Tide Index has revealed a possibility that the total pollution load control has influenced the dynamics of red tide blooms in Ise Bay.

  14. Chesapeake Bay: Introduction to an Ecosystem.

    ERIC Educational Resources Information Center

    Environmental Protection Agency, Washington, DC.

    The Chesapeake Bay is the largest estuary in the contiguous United States. The Bay and its tidal tributaries make up the Chesapeake Bay ecosystem. This document, which focuses of various aspects of this ecosystem, is divided into four major parts. The first part traces the geologic history of the Bay, describes the overall physical structure of…

  15. Initialized Fractional Calculus

    NASA Technical Reports Server (NTRS)

    Lorenzo, Carl F.; Hartley, Tom T.

    2000-01-01

    This paper demonstrates the need for a nonconstant initialization for the fractional calculus and establishes a basic definition set for the initialized fractional differintegral. This definition set allows the formalization of an initialized fractional calculus. Two basis calculi are considered; the Riemann-Liouville and the Grunwald fractional calculi. Two forms of initialization, terminal and side are developed.

  16. Atmospheric deposition fluxes to Monetary Bay

    NASA Astrophysics Data System (ADS)

    Gray, E.; Paytan, A.; Ryan, J.

    2008-12-01

    Atmospheric deposition has been widely recognized as a source of pollutants and nutrients to coastal ecosystems. Specifically, deposition includes nitrogen compounds, sulfur compounds, mercury, pesticides, phosphate, trace metals and other toxic compounds that can travel great distances. Sources of these components include both natural (volcanoes, mineral dust, forest fires) and anthropogenic (fossil fuels, chemical byproducts, incineration of waste) sources, which may contribute to harmful health and environmental impacts such as eutrophication, contaminated fish and harmful algal blooms. This study looks at the flux of aerosol deposition (TSP - total suspended particle load) to Monterey Bay, California. Samples are collected on a cascade impactor aerosol sampler (size fractions PM 2.5 and PM 10) every 48 hours continuously. Preliminary results indicate that the TSP for PM 10 ranged from 0.026 to 0.104 mg m-3 of air and for PM 2.5 from 0.014 to 0.046 mg m-3 of air. Using a deposition velocity of 2 cm s-1 for the large fraction (PM10 - PM 2.5) and a deposition velocity of 0.7 cm s-1 for the fine fraction (PM 2.5) deposition rates are 13 and 86 mg m-2 d-1 respectively.

  17. Fractionally charged skyrmions in fractional quantum Hall effect

    DOE PAGES

    Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; ...

    2015-11-26

    The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeemanmore » energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.« less

  18. Coastal Erosion along Monterey Bay.

    DTIC Science & Technology

    1985-03-01

    RD-Al155 61@ COASTAL EROSION ALONG MONTEREY BAY(U) NAVAL1/ A8POSTGRADUATE SCHOOL MONTEREY CA A I SKLAVIDIS El AL. UNCLASSIFIED F/G 8/3 NmIIhllllllll...RESOLUTION TEST CHART NAVAL POSTGRADUATE SCHOOL Monterey, California 0 to Lfl IC)I I ~JUN 2 71985 THESIS~ COASTAL EROSION ALONG MONTEREY BAY by Anastasios I...PERIOD COVERED Master’s thesis; COASTAL EROSION ALONG MONTEREY BAY March 1985 4. PERFORMING ORG. REPORT NUMBIER 7. AUTMOR(s) 6. CONTRACT OR GRANT NUMBER(a

  19. Spatial and seasonal patterns of ichthyoplankton assemblages in the Haizhou Bay and its adjacent waters of China

    NASA Astrophysics Data System (ADS)

    Li, Zengguang; Ye, Zhenjiang; Wan, Rong

    2015-12-01

    Surveys were conducted in five voyages in Haizhou Bay and its adjacent coastal area from March to December 2011 during full moon spring tides. The ichthyoplankton assemblages and the environmental factors that affect their spatial and seasonal patterns were determined. Totally 35 and 12 fish egg and larvae taxa were identified, respectively. Over the past several decades, the egg and larval species composition has significantly changed in Haizhou Bay and its adjacent waters, most likely corresponding with the alteration of fishery resources, which are strongly affected by anthropogenic activities and climate change. The Bray-Curtis dissimilarity index identified four assemblages: near-shore bay assemblage, middle bay assemblage and two closely related assemblages (near-shore/middle bay assemblage and middle/edge of bay assemblage). The primary species of each assemblage principally reflected the spawning strategies of adult fish. The near-shore bay assemblage generally occurred in near-shore bay, with depths measuring <20 m, and the middle bay assemblage generally occurred in the middle of bay, with depths measuring 20 to 40 m. Spatial and seasonal variations in ichthyoplankton in each assemblage were determined by interactions between biological behavioral traits and oceanographic features, particularly the variation of local conditions within the constraint of a general reproductive strategy. The results of Spearman's rank correlation analysis indicated that both fish egg and larval abundance were positively correlated with depth, which is critical to the oceanographic features in Haizhou Bay.

  20. Mixed sediment beach processes: Kachemak Bay, Alaska

    USGS Publications Warehouse

    Ruggiero, P.; Adams, P.N.; Warrick, J.A.

    2007-01-01

    Mixed sediment beaches are morphologically distinct from and more complex than either sand or gravel only beaches. Three digital imaging techniques are employed to quantify surficial grain size and bedload sediment transport rates along the mixed sediment beaches of Kachemak Bay, Alaska. Applying digital imaging procedures originally developed for quickly and efficiently quantifying grain sizes of sand to coarse sediment classes gives promising results. Hundreds of grain size estimates lead to a quantitative characterization of the region's sediment at a significant reduction in cost and time as compared to traditional techniques. Both the sand and coarse fractions on this megatidal beach mobilize into self-organized bedforms that migrate alongshore with a seasonally reflecting the temporal pattern of the alongshore component of wave power. In contrast, the gravel bedforms also migrate in the cross-shore without significant seasonally suggesting that swash asymmetry is sufficient to mobilize the gravel even during low energy summer conditions. ?? 2007 ASCE.

  1. Microcontaminants and reproductive impairment of the Forster's tern on Green Bay, Lake Michigan,1983

    USGS Publications Warehouse

    Kubiak, T.J.; Harris, H.J.; Smith, L.M.; Schwartz, T.R.; Stalling, D.L.; Trick, J.A.; Sileo, L.; Docherty, D.E.; Erdman, T.C.

    1989-01-01

    in an egg-exchange experiment, but was sharply decreased in Lake Poygan eggs incubated in Green Bay nests. Nest abandonment and egg disappearance were substantial at Green Bay but nil at Lake Poygan. Thus, not only factors intrinsic to the egg, but also extrinsic factors (parental attentiveness), impaired reproductive outcome at Green Bay. The epidemiological evidence from this study strongly suggested that contaminants were a causal factor. AHH-active PCB congeners (intrinsic effects) and PCBs in general (extrinsic effects) appeared to be the only contaminants at the concentrations measured in eggs, capable of producing the effects that were observed at Green Bay.

  2. Modeling bioaccumulation and biotransformation of PAHs and PCBs by benthic macrofauna from lower Chesapeake Bay

    SciTech Connect

    Dickhut, R.M.; Schaffner, L.C.; Lay, P.; Mitra, S.

    1995-12-31

    The bioaccumulation and biotransformation of selected PAHs and PCBs from sediments spiked with radiolabeled compounds were examined in benthic communities from lower chesapeake Bay during summer and winter. Kinetic models were then used to determine the steady-state bioaccumulation factors (BAFs) for the parent compounds in various benthic macrofaunal organisms, as well as the BAFs of aqueous soluble metabolites that tended to accumulate in the animals. BAFs for the parent compounds increased with the octanol-water partition coefficient (K{sub ow}) of the compound up to a log K{sub ow} of approximately 6. However, in contrast to previous studies, the elimination rate constant was the dominant factor controlling the observed nonequilibrium with respect to bioaccumulation of the organic contaminants. Consequently, BAFs for the parent contaminants were related to the physical-chemical factors regulating passive elimination, as well as metabolic transformation of the parent compound. Aqueous soluble metabolite BAFs were directly related to the physical-chemical factors dictating the rate of formation of the conjugated complexes. Overall, body burdens of organic contaminants were higher in the summer relative to winter, as were the aqueous soluble metabolite fractions of contaminants in the animals, possibly indicating that organism activities as well as lipid pools are higher in summer compared to winter. The results indicate that a variety of physical, chemical, and biological factors interact in the ecosystem to dictate bioaccumulation and biotransformation of organic contaminants.

  3. Seasonal and spatial characteristics of seawater and sediment at Youngil Bay, southeast coast of Korea.

    PubMed

    Lee, Mikyung; Bae, Wookeun; Chung, Jinwook; Jung, Hoi-Soo; Shim, Hojae

    2008-01-01

    analysis showed that the major controlling factors for the distribution pattern of each metal are grain size and organic carbon (C(org)) content. Based on the factor analysis, Al, Fe, Cr, Li, and Pb were shown strongly correlated with the mean grain size (Mz), whereas Cd, Cu, Zn, and Sn with the C(org) content. Results from the fractionation of the sedimentary metals into lattice and labile fractions to characterize the mobility of sediment metals showed that the mineral lattice fraction was high in the order of Al=K>Cr>Li>Sr>Fe, while the labile fraction, which might be released to the overlying water, was in the order of Pb>Zn>Cd>Cu>Ca>Sn. Evaluation of the sediment pollution status by applying (I(geo)(')) of 13 metals showed Cd, Cu, and Zn as high as 1-3 range at the old port. Even though the overall marine pollution mainly by the world-class steel industrial complex in this semi-enclosed bay area studied does not currently pose a serious threat, due to the seawater circulation and the large influx of river discharge, the countermeasures to implement the sediments concentrated with heavy metals, especially at the old port with no seawater circulation, are still warranted for this coastal water environment.

  4. Controls on residence time and exchange in a system of shallow coastal bays

    NASA Astrophysics Data System (ADS)

    Safak, I.; Wiberg, P. L.; Richardson, D. L.; Kurum, M. O.

    2015-04-01

    Patterns of transport and residence time influence the morphology, ecology and biogeochemistry of shallow coastal bay systems in important ways. To better understand the factors controlling residence time and exchange in coastal bays, a three-dimensional finite-volume coastal ocean model was set up and validated with field observations of circulation in a system of 14 shallow coastal bays on the Atlantic coast of the USA (Virginia Coast Reserve). Residence times of neutrally buoyant particles as well as exchange among the bays in the system and between the bays and the ocean were examined with Lagrangian particle tracking. There was orders of magnitude variation in the calculated residence time within most of the bays, ranging from hours in the tidally refreshed (repletion) water near the inlets to days-weeks in the remaining (residual) water away from the inlets. Residence time in the repletion waters was most sensitive to the tidal phase (low vs. high) when particles were released whereas residence time in the residual waters was more sensitive to wind forcing. Wind forcing was found to act as a diffuser that shortens particle residence within the bays; its effect was higher away from the inlets and in relatively confined bays. Median residence time in the bays significantly decreased with an increase in the ratio between open water area and total area (open water plus marsh). Exchange among the bays and capture areas of inlets (i.e., exchange between the bays and the ocean) varied considerably but were insensitive to tidal phase of release, wind, and forcing conditions in different years, in contrast to the sensitivity of residence time to these factors. We defined a new quantity, termed shortest-path residence time, calculated as distance from the closest inlet divided by root-mean-square velocity at each point in model domain. A relationship between shortest-path residence time and particle-tracking residence time provides a means of estimating residence time

  5. THEORETICAL AND EXPERIMENTAL ASPECTS OF ISOTOPIC FRACTIONATION.

    USGS Publications Warehouse

    O'Neil, James R.

    1986-01-01

    Essential to the interpretation of natural variations of light stable isotope ratios is knowledge of the magnitude and temperature dependence of isotopic fractionation factors between the common minerals and fluids. These fractionation factors are obtained in three ways: (1) Semi-empirical calculations using spectroscopic data and the methods of statistical mechanics. (2) Laboratory calibration studies. (3) Measurements of natural samples whose formation conditions are well-known or highly constrained. In this chapter methods (1) and (2) are evaluated and a review is given of the present state of knowledge of the theory of isotopic fractionation and the fraction that influence the isotopic properties of minerals.

  6. Fraction Sense: Foundational Understandings.

    PubMed

    Fennell, Francis Skip; Karp, Karen

    2016-08-09

    The intent of this commentary is to identify elements of fraction sense and note how the research studies provided in this special issue, in related but somewhat different ways, validate the importance of such understandings. Proficiency with fractions serves as a prerequisite for student success in higher level mathematics, as well as serving as a gateway to many occupations and varied contexts beyond the mathematics classroom. Fraction sense is developed through instructional opportunities involving fraction equivalence and magnitude, comparing and ordering fractions, using fraction benchmarks, and computational estimation. Such foundations are then extended to operations involving fractions and decimals and applications involving proportional reasoning. These components of fraction sense are all addressed in the studies provided in this issue, with particular consideration devoted to the significant importance of the use of the number line as a central representational tool for conceptually understanding fraction magnitude.

  7. Missisquoi Bay Phosphorus Model Addendum

    EPA Pesticide Factsheets

    This technical memorandum provides results of an extended load reduction simulation. The memorandum serves as an addendum to the main Missisquoi Bay Phosphorus Mass Balance Model report prepared for the Lake Champlain Basin Program by LimnoTech in 2012

  8. Eutrophication in the Chesapeake Bay

    NASA Technical Reports Server (NTRS)

    Ulanowicz, R. E.

    1978-01-01

    The advantages and limitations of using remote sensing to acquire fast reliable data on the nutrient problem in the Chesapeake Bay ecosystem are discussed. Pollution effects to phytoplankton blooms during late summer and early fall months are also considered.

  9. Keep Colon Cancer At Bay

    MedlinePlus

    ... https://medlineplus.gov/news/fullstory_164231.html Keep Colon Cancer at Bay Colonoscopy best way to detect disease ... 22, 2017 WEDNESDAY, March 22, 2017 (HealthDay News) -- Colon cancer can be treated and cured if it's diagnosed ...

  10. Modelling Wind Effects on Subtidal Salinity in Apalachicola Bay, Florida

    NASA Astrophysics Data System (ADS)

    Huang, W.; Jones, W. K.; Wu, T. S.

    2002-07-01

    Salinity is an important factor for oyster and estuarine productivity in Apalachicola Bay. Observations of salinity at oyster reefs have indicated a high correlation between subtidal salinity variations and the surface winds along the bay axis in an approximately east-west direction. In this paper, we applied a calibrated hydrodynamic model to examine the surface wind effects on the volume fluxes in the tidal inlets and the subtidal salinity variations in the bay. Model simulations show that, due to the large size of inlets located at the east and west ends of this long estuary, surface winds have significant effects on the volume fluxes in the estuary inlets for the water exchanges between the estuary and ocean. In general, eastward winds cause the inflow from the inlets at the western end and the outflow from inlets at the eastern end of the bay. Winds at 15 mph speed in the east-west direction can induce a 2000 m3 s-1 inflow of saline seawater into the bay from the inlets, a rate which is about 2·6 times that of the annual average freshwater inflow from the river. Due to the varied wind-induced volume fluxes in the inlets and the circulation in the bay, the time series of subtidal salinity at oyster reefs considerably increases during strong east-west wind conditions in comparison to salinity during windless conditions. In order to have a better understanding of the characteristics of the wind-induced subtidal circulation and salinity variations, the researchers also connected model simulations under constant east-west wind conditions. Results show that the volume fluxes are linearly proportional to the east-west wind stresses. Spatial distributions of daily average salinity and currents clearly show the significant effects of winds on the bay.

  11. Key factors affecting on bio-hydrogen production from co-digestion of organic fraction of municipal solid waste and kitchen wastewater.

    PubMed

    Tawfik, Ahmed; El-Qelish, Mohamed

    2014-09-01

    The effects of sludge residence time (SRT) and dilution ratio (DR) on the continuous H2 production (HP) from co-digestion of organic fraction of municipal solid waste (OFMSW) and kitchen wastewater (KWW) via mesophilic anaerobic baffled reactor (ABR) was investigated. Increasing DR from 1:2 to 1:3 significantly (P<0.1) increased the H2 yield (HY) from 116.5±76 to 142.5±54 ml H2/g CODremoved d, respectively. However, at a DR of 1:4, the HY was dropped to 114.5±65 ml H2/g CODremoved d. Likewise, HY increased from 83±37 to 95±24 ml H2/g CODremoved d, when SRT increased from 3.6 to 4.0 d. Further increase in HY of 148±42 ml H2/g CODremoved d, was occurred at a SRT of 5.6d. Moreover, hydrogen fermentation facilitated carbohydrate, lipids, protein and volatile solids removal efficiencies of 87±5.8%, 74.3±9.12%, 76.4±11.3% and 84.8±4.1%, respectively.

  12. Effects of management factors on the concentration of a high molecular weight polysaccharide fraction from log-grown shiitake mushrooms (Lentinula edodes (Berk.) Pegler).

    PubMed

    Kimmons, Tom E; Phillips, Mark; Brauer, David

    2010-04-14

    Shiitake mushrooms have a reputation as a healthy food. Growers may be able to use the presence of health-promoting constituents as a marketing tool to promote sales of their products for premium prices. There are few reports on the effects of management protocols for log-grown shiitakes on the concentrations of constituents to guide growers. This paper summarizes several studies that examined the effects of shiitake strains, mushroom cap development, and length of saprophytic association on the concentrations of a high molecular weight polysaccharide fraction that includes lentinan (HMWP). Concentrations of HMWP in mushrooms varied as much as 8-fold during fruiting among the 12 strains tested in these studies. Results also indicate that the concentrations of HMWP in shiitake mushrooms are influenced by the fungal phenotype and the characteristics of the environment. General trends showed that (1) mushrooms harvested at more immature stages of development (during bud break or before veil break) tended to have higher concentrations of HMWP and (2) the initial harvests of mushrooms from an inoculated log tend to have higher concentrations of HMWP than subsequent harvests. Results suggest that growers interested in maximizing the HMWP content of their mushrooms should use shiitake strains NN-430 and 569-430.

  13. Recent results from Daya Bay

    NASA Astrophysics Data System (ADS)

    Chua, Ming-chung

    2016-11-01

    Utilizing powerful nuclear reactors as antineutrino sources, high mountains to provide ample shielding from cosmic rays in the vicinity, and functionally identical detectors with large target volume for near-far relative measurement, the Daya Bay Reactor Neutrino Experiment has achieved unprecedented precision in measuring the neutrino mixing angle θ13 and the neutrino mass squared difference |Δm2ee|. I will report the latest Daya Bay results on neutrino oscillations and light sterile neutrino search.

  14. A HABITAT SUITABILITY INDEX FOR THE BAY SCALLOP ARGOPECTEN IRRADIANS

    EPA Science Inventory

    Poster presentation at a scientific meeting. A survey of Lagoon Pond, Martha's Vineyard, MA, USA was conducted in September 2005 to determine the combination of habitat factors most highly correlated with the bay scallop Argopecten irradians) abundance. A stratified random samp...

  15. Sedimentation and bathymetry changes in Suisun Bay: 1867-1990

    USGS Publications Warehouse

    Cappiella, Karen; Malzone, Chris; Smith, Richard; Jaffe, Bruce

    1999-01-01

    Understanding patterns of historical erosion and deposition in San Francisco Bay is crucial in managing such issues as locating deposits of sediment-associated contaminants, and the restoration of wetland areas. These problems were addressed by quantitatively examining historical hydrographic surveys. The data from five hydrographic surveys, made from 1867 to 1990, were analyzed using surface modeling software to determine long-term changes in the sediment system of Suisun Bay and surrounding areas. A surface grid displaying the bathymetry was created for each survey period, and the bathymetric change between survey periods was computed by differencing these grids. Patterns and volumes of erosion and deposition, sedimentation rates, and shoreline changes were derived from the resulting change grids. Approximately 115 million cubic meters of sediment were deposited in the Suisun Bay area from 1867 to 1887, the majority of which was debris from hydraulic gold mining in the Sierra Nevada. Just under two-thirds of the area of the study site was depositional during this time period, while less than one-third of it was erosional. However, over the entire study period, the Suisun Bay area lost sediment, indicating that a large amount of erosion occurred from1887 to 1990. In fact, this area lost sediment during each of the change periods between 1887 and 1990. Because erosion and deposition are processes that may vary over space and time, further analyses of more specific areas were done to examine spatial and temporal patterns. The change in the Suisun Bay area from being a largely depositional environment to an erosional one is the result of a combination of several factors. These factors include the regulation and subsequent cessation of hydraulic mining practices, and the increase in flood control and water distribution projects that have decreased sediment supply to the bay by reducing the frequency and duration of peak flow conditions. Another pattern shown by the

  16. Sequestration of nonylphenol in sediment from Bohai Bay, North China.

    PubMed

    Jin, Fen; Hu, Jianying; Liu, Jinlin; Yang, Min; Wang, Fu; Wang, Hong

    2008-02-01

    The ubiquity of nonylphenol (NP) in aquatic environments has been well documented, and the long-term fate of NP in sediments is a concern from the viewpoint of risk assessment due to its endocrine-disrupting effects. This paper reports on the assessment of long-term fate of NP in marine sediments by determining extractable and nonextractable fractions of NP in surface sediments and a sediment core from Bohai Bay, North China. The extractable fraction was operationally defined as the fraction of NP that was extracted with a solvent mixture of methanol/methylene chloride, and the nonextractable fraction was the portion of NP that can be released from the sediments by alkaline hydrolyzing after the initial solvent extraction. The total concentrations (extractable and nonextractable) of NP were 3.4-34.3 ng/g dw in the surface sediments and 2.2-17.7 ng/g dw in the sediment core. Depending on the sedimentation time, the percentage of nonextractable NP relative to the total NP in the core ranged from 38 to 99%. Based on the relationship between the percentage of nonextractable NP in sediments and sedimentation time, the sequestration rate of NP in the sediment core from Bohai Bay was estimated to be 0.94% x a(-1). These results have important implications in understanding the geochemical fate of NP in sediments.

  17. Analysis of Trends in Fish Assemblages in Narragansett Bay, RI/MA

    EPA Science Inventory

    Estuarine fish are highly valued resources that are affected by several factors, including climate, landscape, pollution, and fishing pressure. Here, we examine patterns of variability in estuarine fish assemblages in Narragansett Bay, an estuary located in Rhode Island and Mass...

  18. Impact evaluation of the industrial activities in the Bay of Bakar (Adriatic Sea, Croatia): recent benthic foraminifera and heavy metals.

    PubMed

    Popadić, Adriana; Vidović, Jelena; Cosović, Vlasta; Medaković, Davorin; Dolenec, Matej; Felja, Igor

    2013-11-15

    The Bay of Bakar is one of the most heavily polluted bays at the Eastern Adriatic. Three major industrial companies potentially endanger the bay. The concentration of major, minor and trace elements in surface sediments from thirteen stations was discussed in relation to the sediment type and foraminiferal assemblages. The distribution of major elements in the bay is influenced by geological nature of surroundings. Heavy metal distribution depends on pollution sources and on amount of mud fraction: fine-grained sediments are enriched by them in comparison with coarse-grained ones. Different sediment quality criteria complicate the pollution assessment in the bay. Heavy metal concentrations generally fall into allowed depositional values for marine environments; only area in front of the coke plant and the City of Bakar harbor is heavily polluted. Stress-tolerant foraminiferal species dominate at stations with higher concentrations of heavy metals and coarse-grained sediments consist of larger number of epifaunal taxa.

  19. Benthic fauna of Blagopoluchiya Bay (Novaya Zemlya Archipelago, Kara Sea)

    NASA Astrophysics Data System (ADS)

    Udalov, A. A.; Vedenin, A. A.; Simakov, M. I.

    2016-09-01

    The benthic fauna was studied in the Blagopoluchiya Bay (Kara Sea, Novaya Zemlya Archipelago) during an expedition of the R/V Professor Shtokman in autumn 2013. The inner basin of the bay, with depths of around 150 m, is separated from the outer slope of Novaya Zemlya by a shoal 30 m in depth. Six macrobenthic communities were described at nine stations (25 bottom grab samples) taken along a transect from the inner part of the bay to the outer part of the slope. The depths, position on the transect axis and sediment types were the major factors influencing the distribution of the communities. The benthic abundance and biomass in the inner and outer parts of the bay did not differ significantly. The diversity of macrobenthic organisms (α-diversity as the number of species in the sample and β-diversity as the rate of increase in species number in the area) was lower in the inner part of the bay. The intertidal zone (littoral) has been described. The littoral fauna was very poor; it comprised only the amphipods Gammarus setosus inhabiting the near-surface area.

  20. Declining extent of open-water refugia for top predators in Baffin Bay and adjacent waters.

    PubMed

    Heide-Jørgensen, Mads Peter; Laidre, Kristin L

    2004-12-01

    Global climate change is expected to severely impact Arctic ecosystems, yet predictions of impacts are complicated by region-specific patterns and nonuniform trends. Twentyfour open-water overwintering areas (or "microhabitats") were identified to be of particular importance for eight seabird and marine mammal species in the eastern Canadian High Arctic and Baffin Bay. Localized trends in the available fraction of open-water were examined in March during 1979--2001, derived from approximate sea ice concentrations from satellite-based microwave telemetry. Declines in the fraction of open-water were identified at microhabitats in Baffin Bay, Davis Strait, coastal West Greenland, and Lancaster Sound. Increases in open-water were observed in Hudson Bay, Hudson Strait, and Foxe Basin. The biological importance of each microhabitat was examined based on species distribution and abundance. Potential consequences of reduced open-water for top marine predators include impacts on foraging efficiency and oxygen and prey availability.

  1. DIY Fraction Pack.

    ERIC Educational Resources Information Center

    Graham, Alan; Graham, Louise

    2003-01-01

    Describes a very successful attempt to teach fractions to year 5 pupils based on pupils making their own fraction pack. Children decided for themselves how to make the fractional slices used in the activity using colored cardboard sheets and templates of a paper circle consisting of 24 equal slices. (Author/NB)

  2. Pitch fractionation. Technical report

    SciTech Connect

    Weinberg, V.L.; White, J.L.

    1981-12-15

    Petroleum pitch (Ashland A240) has been subjected to thermal treatment and solvent fractionation to produce refined pitches to be evaluated as impregnants for carbon-carbon composites. The solvent fractions were obtained by sequential Soxhlet extraction with solvents such as hexane, cyclohexane, toluene, and pyridine. The most severe thermal treatment produced a mesophase pitch (approximately 50% mesophase); an appreciable portion of the mesophase was soluble in strong solvents. There were substantial differences in chemical composition and in pyrolysis behavior of the fractions. As the depth of fraction increased, the pyrolysis yield and bloating increased, and the microstructure of the coke became finer until glassy microconstituents were formed in the deepest fractions.

  3. Hypoxia-Inducible Factor Pathway Inhibition Resolves Tumor Hypoxia and Improves Local Tumor Control After Single-Dose Irradiation

    SciTech Connect

    Helbig, Linda; Koi, Lydia; Brüchner, Kerstin; Gurtner, Kristin; Hess-Stumpp, Holger; Unterschemmann, Kerstin; Pruschy, Martin; and others

    2014-01-01

    Purpose: To study the effects of BAY-84-7296, a novel orally bioavailable inhibitor of mitochondrial complex I and hypoxia-inducible factor 1 (HIF-1) activity, on hypoxia, microenvironment, and radiation response of tumors. Methods and Materials: UT-SCC-5 and UT-SCC-14 human squamous cell carcinomas were transplanted subcutaneously in nude mice. When tumors reached 4 mm in diameter BAY-84-7296 (Bayer Pharma AG) or carrier was daily administered to the animals. At 7 mm tumors were either excised for Western blot and immunohistologic investigations or were irradiated with single doses. After irradiation animals were randomized to receive BAY-84-7296 maintenance or carrier. Local tumor control was evaluated 150 days after irradiation, and the dose to control 50% of tumors (TCD{sub 50}) was calculated. Results: BAY-84-7296 decreased nuclear HIF-1α expression. Daily administration of inhibitor for approximately 2 weeks resulted in a marked decrease of pimonidazole hypoxic fraction in UT-SCC-5 (0.5% vs 21%, P<.0001) and in UT-SCC-14 (0.3% vs 19%, P<.0001). This decrease was accompanied by a significant increase in fraction of perfused vessels in UT-SCC-14 but not in UT-SCC-5. Bromodeoxyuridine and Ki67 labeling indices were significantly reduced only in UT-SCC-5. No significant changes were observed in vascular area or necrosis. BAY-84-7296 before single-dose irradiation significantly decreased TCD{sub 50}, with an enhancement ratio of 1.37 (95% confidence interval [CI] 1.13-1.72) in UT-SCC-5 and of 1.55 (95% CI 1.26-1.94) in UT-SCC-14. BAY-84-7296 maintenance after irradiation did not further decrease TCD{sub 50}. Conclusions: BAY-84-7296 resulted in a marked decrease in tumor hypoxia and substantially reduced radioresistance of tumor cells with the capacity to cause a local recurrence after irradiation. The data suggest that reduction of cellular hypoxia tolerance by BAY-84-7296 may represent the primary biological mechanism underlying the observed enhancement of

  4. 33 CFR 100.911 - Bay City Airshow, Bay City, MI.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI....

  5. 33 CFR 100.919 - International Bay City River Roar, Bay City, MI.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false International Bay City River Roar, Bay City, MI. 100.919 Section 100.919 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Bay City River Roar, Bay City, MI. (a) Regulated Area. A regulated area is established to include...

  6. 77 FR 2972 - Thunder Bay Power Company, Thunder Bay Power, LLC, et al.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-20

    ... Energy Regulatory Commission Thunder Bay Power Company, Thunder Bay Power, LLC, et al.; Notice of Application for Transfer of Licenses, and Soliciting Comments and Motions To Intervene Thunder Bay Power Company Project No. 2404-095 Thunder Bay Power, LLC Midwest Hydro, Inc Project Nos. 2348-035,...

  7. 33 CFR 100.911 - Bay City Airshow, Bay City, MI.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI....

  8. 33 CFR 100.911 - Bay City Airshow, Bay City, MI.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI....

  9. 33 CFR 100.911 - Bay City Airshow, Bay City, MI.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI....

  10. 33 CFR 100.911 - Bay City Airshow, Bay City, MI.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Bay City Airshow, Bay City, MI. 100.911 Section 100.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.911 Bay City Airshow, Bay City, MI....

  11. 77 FR 21890 - Drawbridge Operation Regulation; Sturgeon Bay Ship Canal, Sturgeon Bay, WI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-12

    ... SECURITY Coast Guard 33 CFR Part 117 RIN 1625-AA09 Drawbridge Operation Regulation; Sturgeon Bay Ship Canal... across the Sturgeon Bay Ship Canal, at miles 4.17 and 4.3, in Sturgeon Bay, Wisconsin. The establishment... drawbridge schedules for all three drawbridges over Sturgeon Bay Ship Canal, including the two bridges...

  12. Management case study: Tampa Bay, Florida

    USGS Publications Warehouse

    Morrison, Gerold; Greening, Holly; Yates, Kimberly K.; Wolanski, Eric; McLusky, Donald S.

    2011-01-01

    Tampa Bay, Florida, USA, is a shallow, subtropical estuary that experienced severe cultural eutrophication between the 1940s and 1980s, a period when the human population of its watershed quadrupled. In response, citizen action led to the formation of a public- and private-sector partnership (the Tampa Bay Estuary Program), which adopted a number of management objectives to support the restoration and protection of the bay’s living resources. These included numeric chlorophyll a and water-clarity targets, as well as long-term goals addressing the spatial extent of seagrasses and other selected habitat types, to support estuarine-dependent faunal guilds. Over the past three decades, nitrogen controls involving sources such as wastewater treatment plants, stormwater conveyance systems, fertilizer manufacturing and shipping operations, and power plants have been undertaken to meet these and other management objectives. Cumulatively, these controls have resulted in a 60% reduction in annual total nitrogen (TN) loads relative to earlier worse-case (latter 1970s) conditions. As a result, annual water-clarity and chlorophyll a targets are currently met in most years, and seagrass cover measured in 2008 was the highest recorded since 1950. Factors that have contributed to the observed improvements in Tampa Bay over the past several decades include the following: (1) Development of numeric, science-based water-quality targets to meet a long-term goal of restoring seagrass acreage to 1950s levels. Empirical and mechanistic models found that annual average chlorophyll a concentrations were a primary manageable factor affecting light attenuation. The models also quantified relationships between TN loads, chlorophyll a concentrations, light attenuation, and fluctuations in seagrass cover. The availability of long-term monitoring data, and a systematic process for using the data to evaluate the effectiveness of management actions, has allowed managers to track progress and

  13. South Bay Salt Pond Mercury Studies Project

    EPA Pesticide Factsheets

    Information about the SFBWQP South Bay Salt Pond Mercury Studies Project, part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquatic resources.

  14. Clean Watersheds for a Clean Bay Project

    EPA Pesticide Factsheets

    Information about the SFBWQPClean Watersheds for a Clean Bay Project: Implementing the PCB TMDL, part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquatic resources.

  15. NASA Satellites Aid in Chesapeake Bay Recovery

    NASA Video Gallery

    By studying the landscape around the Chesapeake Bay, NASA spacecrafts are helping land managers figure out how to battle the harmful pollutants that have added to the destruction of the bay's once ...

  16. SF Bay Water Quality Improvement Fund

    EPA Pesticide Factsheets

    EPAs grant program to protect and restore San Francisco Bay. The San Francisco Bay Water Quality Improvement Fund (SFBWQIF) has invested in 58 projects along with 70 partners contributing to restore wetlands, water quality, and reduce polluted runoff.,

  17. East Bay Municipal Utility District Settlement

    EPA Pesticide Factsheets

    The East Bay Municipal Utility District and its seven member communities own and operate a separate sanitary sewer system, which serves approximately 650,000 customers on the eastern side of San Francisco Bay in California.

  18. Facility Layout Problems Using Bays: A Survey

    NASA Astrophysics Data System (ADS)

    Davoudpour, Hamid; Jaafari, Amir Ardestani; Farahani, Leila Najafabadi

    2010-06-01

    Layout design is one of the most important activities done by industrial Engineers. Most of these problems have NP hard Complexity. In a basic layout design, each cell is represented by a rectilinear, but not necessarily convex polygon. The set of fully packed adjacent polygons is known as a block layout (Asef-Vaziri and Laporte 2007). Block layout is divided by slicing tree and bay layout. In bay layout, departments are located in vertical columns or horizontal rows, bays. Bay layout is used in real worlds especially in concepts such as semiconductor and aisles. There are several reviews in facility layout; however none of them focus on bay layout. The literature analysis given here is not limited to specific considerations about bay layout design. We present a state of art review for bay layout considering some issues such as the used objectives, the techniques of solving and the integration methods in bay.

  19. Fraction from wax apple [Syzygium samarangense (Blume) Merrill and Perry] fruit extract ameliorates insulin resistance via modulating insulin signaling and inflammation pathway in tumor necrosis factor α-treated FL83B mouse hepatocytes.

    PubMed

    Shen, Szu-Chuan; Chang, Wen-Chang; Chang, Chiao-Li

    2012-01-01

    Inflammation is associated with the development of insulin resistance in Type 2 diabetes mellitus. In the present study, mouse FL83B cells were treated with tumor necrosis factor-alpha (TNF-α) to induce insulin resistance, and then co-incubated with a fraction from wax apple fruit extract (FWFE). This fraction significantly increased the uptake of the nonradioactive fluorescent indicator 2-[N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl) amino]-2-deoxy-d-glucose (2-NBDG) in insulin resistant cells. Western blot analysis revealed that, compared with the TNF-α-treated control group, FWFE increased the expression of the insulin receptor (IR), insulin receptor substrate-1 (IRS-1), protein kinase B (Akt/PKB), phosphatidylinositol-3 kinase (PI3K), and glucose transporter 2 (GLUT-2), and increased IR tyrosyl phosporylation, in insulin resistant FL83B cells. However, FWFE decreased phosphorylation of c-Jun N-terminal kinases (JNK), but not the expression of the intercellular signal-regulated kinases (ERK), in the same cells. These results suggest that FWFE might alleviate insulin resistance in TNF-α-treated FL83B cells by activating PI3K-Akt/PKB signaling and inhibiting inflammatory response via suppression of JNK, rather than ERK, activation.

  20. Low calcium carbonate saturation state in an Arctic inland sea having large and varying fluvial inputs: The Hudson Bay system

    NASA Astrophysics Data System (ADS)

    Azetsu-Scott, Kumiko; Starr, Michel; Mei, Zhi-Ping; Granskog, Mats

    2014-09-01

    The Hudson Bay system (HBS) is a shallow inland sea in the Arctic, composed of Hudson Strait, Foxe Basin/Channel, James Bay, and Hudson Bay. Dissolved inorganic carbon (DIC) and total alkalinity (TA) measurements were used to investigate the state of ocean acidification, specifically calcium carbonate saturation states (Ω) and pH. The freshwater sources were identified from the relationship between oxygen isotope composition (δ18O) and salinity to understand the role of freshwater in ocean acidification. The saturation state of seawater with respect to calcium carbonate (Ω) in surface water (<10 m) of the HBS was strongly influenced by river runoff. Aragonite under-saturation (Ωarg < 1) was observed in the surface water of the south-eastern Hudson Bay, where the river runoff fraction was high (>10%). The watershed characteristics, however, influenced the alkalinity of river runoff in different parts of Hudson Bay, which contributed to Ω variation in the coastal region. In southwestern Hudson Bay where the watershed is dominated by limestone, Ω was higher compared to eastern Hudson Bay, where the watershed consists of an igneous rock formation. In deeper waters, low Ω is caused by remineralization of organic matter. The highest DIC concentrations (>2300 µmol/kg) were observed in the depths of central Hudson Bay with a pHtotal of 7.49 and Ωarg of 0.37. Over 67% and 22% of the bottom water of Hudson Bay was undersaturated with respect to aragonite and calcite respectively, despite Hudson Bay being very shallow (less than 250 m deep). The aragonite saturation horizon in the central Hudson Bay was around 50 m.

  1. Dividing Fractions: A Pedagogical Technique

    ERIC Educational Resources Information Center

    Lewis, Robert

    2016-01-01

    When dividing one fraction by a second fraction, invert, that is, flip the second fraction, then multiply it by the first fraction. To multiply fractions, simply multiply across the denominators, and multiply across the numerators to get the resultant fraction. So by inverting the division of fractions it is turned into an easy multiplication of…

  2. [Ecological characteristics of phytoplankton in Shenzhen Bay].

    PubMed

    Sun, Jin-Shui; Wai, Onyx Wing-Hong; Dai, Ji-Cui; Ni, Jin-Ren

    2010-01-01

    Based on the data of surface phytoplankton investigated by Hong Kong Environmental Protection Department in Shenzhen Bay in 2006, variation characteristics of phytoplankton communities and the relationship between the phytoplankton diversity indices and environmental factors were analyzed in the present paper. Results showed that a total of 27 genera and 34 species of phytoplankton were identified. Of these, 18 were diatoms (52.94%), 10 were dinoflagellates (29.41%), 6 were from other minor groups (17.65%). The cell abundance was estimated to be from 2.13 x 10(6) to 4.15 x 10(6) cells/L, with an average of 2.92 x 10(6) cells/L. The maximum cell abundance appeared in the autumn (October), followed in spring (May). The cell abundance showed double abundance peaks annually. The cell abundance of phytoplankton decreased from the middle bay to the bay mouth. In the marine area, the diversity index of the phytoplankton ranged from 0.76 to 2.52; the evenness of phytoplankton ranged from 0.29 to 0.74; the diversity and evenness of phytoplankton community were rather low, which indicated that the relative abundances of the species diverged from evenness, phytoplankton community were not steady, and only few dominant species increased rapidly. The species richness index ranged from 0.57 to 2.17, the high eutrophic water body caused the species richness index declined. Better relationship was found between phytoplankton diversity indices and nutrient, salinity, dissolved oxygen.

  3. Using Bayes to get the most out of non-significant results

    PubMed Central

    Dienes, Zoltan

    2014-01-01

    No scientific conclusion follows automatically from a statistically non-significant result, yet people routinely use non-significant results to guide conclusions about the status of theories (or the effectiveness of practices). To know whether a non-significant result counts against a theory, or if it just indicates data insensitivity, researchers must use one of: power, intervals (such as confidence or credibility intervals), or else an indicator of the relative evidence for one theory over another, such as a Bayes factor. I argue Bayes factors allow theory to be linked to data in a way that overcomes the weaknesses of the other approaches. Specifically, Bayes factors use the data themselves to determine their sensitivity in distinguishing theories (unlike power), and they make use of those aspects of a theory’s predictions that are often easiest to specify (unlike power and intervals, which require specifying the minimal interesting value in order to address theory). Bayes factors provide a coherent approach to determining whether non-significant results support a null hypothesis over a theory, or whether the data are just insensitive. They allow accepting and rejecting the null hypothesis to be put on an equal footing. Concrete examples are provided to indicate the range of application of a simple online Bayes calculator, which reveal both the strengths and weaknesses of Bayes factors. PMID:25120503

  4. Contaminant transport in Massachusetts Bay

    USGS Publications Warehouse

    Butman, Bradford

    Construction of a new treatment plant and outfall to clean up Boston Harbor is currently one of the world's largest public works projects, costing about $4 billion. There is concern about the long-term impact of contaminants on Massachusetts Bay and adjacent Gulf of Maine because these areas are used extensively for transportation, recreation, fishing, and tourism, as well as waste disposal. Public concern also focuses on Stellwagen Bank, located on the eastern side of Massachusetts Bay, which is an important habitat for endangered whales. Contaminants reach Massachusetts Bay not only from Boston Harbor, but from other coastal communities on the Gulf of Maine, as well as from the atmosphere. Knowledge of the pathways, mechanisms, and rates at which pollutants are transported throughout these coastal environments is needed to address a wide range of management questions.

  5. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Sturgeon Bay. 117.1101 Section... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The draw of the Michigan Street Bridge, mile 4.3 at Sturgeon Bay, shall open as follows: (1) From March 15 through...

  6. Chesapeake Bay plume dynamics from LANDSAT

    NASA Technical Reports Server (NTRS)

    Munday, J. C., Jr.; Fedosh, M. S.

    1981-01-01

    LANDSAT images with enhancement and density slicing show that the Chesapeake Bay plume usually frequents the Virginia coast south of the Bay mouth. Southwestern (compared to northern) winds spread the plume easterly over a large area. Ebb tide images (compared to flood tide images) show a more dispersed plume. Flooding waters produce high turbidity levels over the shallow northern portion of the Bay mouth.

  7. BAY REGION ATMOSPHERIC CHEMISTRY EXPERIMENT (BRACE)

    EPA Science Inventory

    The Tampa Bay Estuary Program (TBEP) was formed in 1991 to assist the community in developing a comprehensive plan to restore and protect Tampa Bay. The ecological indicator of the health of the Bay is the coverage of seagrasses, historically in decline, which are important to...

  8. Assessing the trace metal pollution in the sediments of Mahshahr Bay, Persian Gulf, via a novel pollution index.

    PubMed

    Vaezi, A R; Karbassi, A R; Fakhraee, M

    2015-10-01

    Sediment samples were collected from the Petrochemical Special Economic Zone of Mahshahr Bay, Persian Gulf, and analyzed for possible trace metal contamination by means of a chemical partitioning method. The heavy metal contents in the sediments follow the order of Al > Sr > Mn > Zn > Ni > Ba > Cr > Cu > As > Co. The degree of sediment contamination was evaluated using pollution load index (PLI), modified degree of contamination (mC d), geo-accumulation index (I geo), and enrichment factor (EF). All these indices compare present concentrations of metals to their background levels in crust and shale. In a specific area with high geological background like Mahshahr Bay, such a comparison may lead to erroneous conclusions. Due to the remarkable contribution of lithogenous fraction, as the natural component, to the bulk concentration of trace metals in the sediments of such an area, assessment of chemical hazard to the surrounding aquatic environment should not be carried out through traditional approaches. In the present study, anthropogenic portion of the metals was determined through one-step chemical sequential extraction and lithogenous portion substituted for the mean crust and shale levels in the new pollution index (RIAquatic). PLI, mC d, and I geo revealed overall low values, but EF, pollution index (I POLL), and newly developed pollution index were relatively high for all samples.

  9. Stable isotope tracing of anaerobic methane oxidation in the gassy sediments of Eckernfoerde Bay, German Baltic Sea

    SciTech Connect

    Martens, C.S.; Albert, D.B.; Alperin, M.J.

    1999-07-01

    Methane concentrations in the pore waters of Eckernfoerde Bay in the German Baltic Sea generally reach gas bubble saturation values within the upper meter of the sediment column. The depth at which saturation occurs is controlled by a balance between rates of methane production, consumption (oxidation), and transport. The relative importance of anaerobic methane oxidation (AMO) in controlling dissolved and gas bubble methane distributions in the bay's sediments is indirectly revealed through methane concentration versus depth profiles, depth variations in the stable C and H isotope composition of methane, and the C isotope composition of total dissolved inorganic carbon ({Sigma}CO{sub 2}). Direct radiotracer measurements indicate that AMO rates of over 15 mM/yr are focused at the base of the sulfate reduction zone. Diagenetic equations that describe the depth destructions of the {delta}{sup 13}C and {delta}D values of methane reproduce isotopic shifts observed throughout the methane oxidation zone and are best fit with kinetic isotope fractionation factors of 1.012 {+-} 0.001 and 1.120 {plus{underscore}minus} 0.020 respectively.

  10. A Creek to Bay Biological Assessment in Oakland, California

    NASA Astrophysics Data System (ADS)

    Ahumada, E.; Ramirez, N.; Lopez, A.; Avila, M.; Ramirez, J.; Arroyo, D.; Bracho, H.; Casanova, A.; Pierson, E.

    2011-12-01

    In 2007, the Surface Water Ambient Monitoring Program (SWAMP) assessed the impact of trash on water quality in the Peralta Creek which is located in the Fruitvale district of Oakland, CA. This 2011 follow-up study will take further steps in evaluating the physical and biological impacts of pollution and human development on Peralta Creek and in the San Leandro Bay, where the Creek empties into the larger San Francisco Bay estuary. This study will utilize two forms of biological assessment in order to determine the level of water quality and ecosystem health of Peralta Creek and San Leandro Bay in Oakland, California. A Rapid Bioassesment Protocal (RBP) will be used as the method of biological assessment for Peralta Creek. RBP uses a biotic index of benthic macroinvertebrates to provide a measure of a water body's health. Larval trematodes found in two mud snails (Ilynassa obsoleta and Cerithidea californica) will be used to evaluate the health of the San Leandro Bay. Due to the complex life cycle of trematodes, the measure of trematode diversity and richness in host species serves as an indicator of estuarine health (Huspeni 2005). We have completed the assessment of one section of Peralta Creek, located at 2465 34th Avenue, Oakland, CA 94601. Abundance results indicate a moderately healthy creek because there were high levels of pollution tolerant benthic macroinvertebrates. The tolerant group of benthic macroinvertebrates includes such organisms as flatworms, leeches, and scuds. This is possibly due to this section of the creek being pumped up to the surface from culverts impacting the macroinvertebrate's life cycle. Another contributing factor to creek health is the amount of organic debris found in the creek, which inhibits the flow and oxygenation of the water, allowing for more pollution tolerant aquatic insects to persist. Further investigation is being conducted to fully assess the Peralta Creek watershed; from the preliminary results one can surmise that

  11. FRACTIONAL PEARSON DIFFUSIONS.

    PubMed

    Leonenko, Nikolai N; Meerschaert, Mark M; Sikorskii, Alla

    2013-07-15

    Pearson diffusions are governed by diffusion equations with polynomial coefficients. Fractional Pearson diffusions are governed by the corresponding time-fractional diffusion equation. They are useful for modeling sub-diffusive phenomena, caused by particle sticking and trapping. This paper provides explicit strong solutions for fractional Pearson diffusions, using spectral methods. It also presents stochastic solutions, using a non-Markovian inverse stable time change.

  12. FRACTIONAL PEARSON DIFFUSIONS

    PubMed Central

    Leonenko, Nikolai N.; Meerschaert, Mark M.

    2013-01-01

    Pearson diffusions are governed by diffusion equations with polynomial coefficients. Fractional Pearson diffusions are governed by the corresponding time-fractional diffusion equation. They are useful for modeling sub-diffusive phenomena, caused by particle sticking and trapping. This paper provides explicit strong solutions for fractional Pearson diffusions, using spectral methods. It also presents stochastic solutions, using a non-Markovian inverse stable time change. PMID:23626377

  13. Mobile Bay turbidity plume study

    NASA Technical Reports Server (NTRS)

    Crozier, G. F.

    1976-01-01

    Laboratory and field transmissometer studies on the effect of suspended particulate material upon the appearance of water are reported. Quantitative correlations were developed between remotely sensed image density, optical sea truth data, and actual sediment load. Evaluation of satellite image sea truth data for an offshore plume projects contours of transmissivity for two different tidal phases. Data clearly demonstrate the speed of change and movement of the optical plume for water patterns associated with the mouth of Mobile bay in which relatively clear Gulf of Mexico water enters the bay on the eastern side. Data show that wind stress in excess of 15 knots has a marked impact in producing suspended sediment loads.

  14. Bayes' postulate for trinomial trials

    NASA Astrophysics Data System (ADS)

    Diniz, M. A.; Polpo, A.

    2012-10-01

    In this paper, we discuss Bayes' postulate and its interpretation. We extend the binomial trial method proposed by de Finetti [1] to trinomial trials, for which we argue that the consideration of equiprobability a priori for the possible outcomes of the trinomial trials implies that the parameter vector has Dirichlet(1,1) as prior. Based on this result, we agree with Stigler [2] in that the notion in Bayes' postulate stating "absolutely know nothing" is related to the possible outcomes of an experiment and not to "non-information" about the parameter.

  15. South San Francisco Bay, California

    USGS Publications Warehouse

    Dartnell, Peter; Gibbons, Helen

    2007-01-01

    View eastward. Elevations in mapped area color coded: purple (approx 15 m below sea level) to red-orange (approx 90 m above sea level). South San Francisco Bay is very shallow, with a mean water depth of 2.7 m (8.9 ft). Trapezoidal depression near San Mateo Bridge is where sediment has been extracted for use in cement production and as bay fill. Land from USGS digital orthophotographs (DOQs) overlaid on USGS digital elevation models (DEMs). Distance across bottom of image approx 11 km (7 mi); vertical exaggeration 1.5X.

  16. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    .... Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light mounted... extended; thence south 530 feet to a point 100 feet from the northern edge of the channel; thence southeasterly 2,350 feet along a line parallel to the northern edge of the channel to a point on the east...

  17. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    .... Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light mounted... extended; thence south 530 feet to a point 100 feet from the northern edge of the channel; thence southeasterly 2,350 feet along a line parallel to the northern edge of the channel to a point on the east...

  18. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    .... Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light mounted... extended; thence south 530 feet to a point 100 feet from the northern edge of the channel; thence southeasterly 2,350 feet along a line parallel to the northern edge of the channel to a point on the east...

  19. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    .... Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light mounted... extended; thence south 530 feet to a point 100 feet from the northern edge of the channel; thence southeasterly 2,350 feet along a line parallel to the northern edge of the channel to a point on the east...

  20. 33 CFR 110.78 - Sturgeon Bay, Sturgeon Bay, Wis.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    .... Beginning at a point bearing 126°, 3,000 feet from the fixed green Sturgeon Bay Canal Leading Light mounted... extended; thence south 530 feet to a point 100 feet from the northern edge of the channel; thence southeasterly 2,350 feet along a line parallel to the northern edge of the channel to a point on the east...

  1. Heavy metal pollution status in surface sediments of the coastal Bohai Bay.

    PubMed

    Gao, Xuelu; Chen, Chen-Tung Arthur

    2012-04-15

    Bohai Bay, the second largest bay of Bohai Sea, largely due to the huge amount of pollutants discharged into it annually and its geohydrologic condition, is considered to be one of the most polluted marine areas in China. To slow down, halt and finally reverse the environmental deterioration of Bohai Sea, some researchers have proposed to connect it with Jiaozhou Bay in the western coast of Southern Yellow Sea by digging an interbasin canal through Shandong Peninsula. In order to assess the heavy metal pollution and provide background information for such a large geoengineering scheme, surface sediments from 42 stations covering both riverine and marine regions of the northwestern coast of Bohai Bay were analyzed for heavy metal content and fractionation (Cd, Cr, Cu, Ni, Pb and Zn). Three empirically derived sediment quality guidelines were used to assess the pollution extent of these metals. The studied metals had low mobility except for Cd at all stations and Zn at some riverine stations. Although a high mobility of Cd was observed, it could hardly cause a bad effect on the environment owing to its low total concentrations. Anthropogenic influence on the accumulation of studied heavy metals in sediments of Bohai Bay was obvious, but their contents were relatively lower to date comparing with some other marine coastal areas that receive important anthropogenic inputs. Taking as a whole, surface sediments of northwestern Bohai Bay had a 21% probability of toxicity based on the mean effects range-median quotient.

  2. Tarpum Bay, Bahamas

    NASA Technical Reports Server (NTRS)

    2002-01-01

    In this ASTER image the features that look like folded material are carbonate sand dunes in the shallow waters of Tarpum Bay, southwest of Eleuthera Island in the Bahamas. The sand making up the dunes comes from the erosion of limestone coral reefs, and has been shaped into dunes by ocean currents.

    This image was acquired on May 12, 2002 by the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) on NASA's Terra satellite. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet.

    ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products.

    The broad spectral coverage and high spectral resolution of ASTER will provide scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop stress; determining cloud morphology and physical properties; wetlands evaluation; thermal pollution monitoring; coral reef degradation; surface temperature mapping of soils and geology; and measuring surface heat balance. Dr. Anne Kahle at NASA's Jet Propulsion Laboratory, Pasadena, California, is the U.S. Science team leader; Bjorn Eng of JPL is the project manager. The Terra mission is part of NASA's Earth Science Enterprise, a long- term research effort to understand and protect our home planet. Through the study of Earth, NASA will help to provide sound science to policy and economic decision-makers so as to better life here, while developing the

  3. Seasonal/Yearly Salinity Variations in San Francisco Bay

    USGS Publications Warehouse

    Peterson, David H.; Cayan, Daniel R.; Dettinger, Michael D.; DiLeo, Jeanne Sandra; Hager, Stephen E.; Knowles, Noah; Nichols, Frederic H.; Schemel, Laurence E.; Smith, Richard E.; Uncles, Reginald J.

    1995-01-01

    The ability of resource agencies to manage fish, wildlife and freshwater supplies of San Francisco Bay estuary requires an integrated knowledge of the relations between the biota and their physical environment. A key factor in these relations is the role of salinity in determining both the physical and the biological character of the estuary. The saltiness of the water, and particularly its seasonal and interannual patterns of variability, affects which aquatic species live where within the estuary. Salinity also determines where water can and cannot be diverted for human consumption and irrigated agriculture, and plays a role in determining the capacity of the estuary to cleanse itself of wastes. In short, salinity is a fundamental property of estuarine physics and chemistry that, in turn, determines the biological characteristics of each estuary. Freshwater is a major control on estuarine salinity. Most freshwater supplied to the Bay is from river flow through the Delta, which is primarily runoff from the Sierra Nevada. Most contaminants in San Francisco Bay are from the Sacramento/San Joaquin Valley and the local watershed around the Bay rather than the sea or atmosphere. Land is the primary source of freshwater and freshwater serves as a tracer of land-derived substances such as the trace metals (copper, lead and selenium), pesticides and plant nutrients (nitrate and phosphate). The U.S. Geological Survey is collaborating with other agencies and institutions in studying San Francisco Bay salinity using field observations and numerical simulations to define the physical processes that control salinity. The issues that arise from salinity fluctuations, however, differ in the northern and southern parts of the bay. In North Bay we need to know how salinity responds to freshwater flow through the Sacramento/San Joaquin Delta; this knowledge will benefit water managers who determine how much delta flow is needed a) to protect freshwater supplies for municipal water

  4. Can Kindergartners Do Fractions?

    ERIC Educational Resources Information Center

    Cwikla, Julie

    2014-01-01

    Mathematics professor Julie Cwikla decided that she needed to investigate young children's understandings and see what precurricular partitioning notions young minds bring to the fraction table. Cwikla realized that only a handful of studies have examined how preschool-age and early elementary school-age students solve fraction problems (Empson…

  5. On fractional programming

    SciTech Connect

    Bajona-Xandri, C.; Martinez-Legaz, J.E.

    1994-12-31

    This paper studies the minimax fractional programming problem, assuming quasiconvexity of the objective function, under the lower subdifferentiability viewpoint. Necessary and sufficient optimality conditions and dual properties are found. We present applications of this theory to find the Pareto efficient solutions of a multiobjective fractional problem and to solve several economic models.

  6. (Carbon isotope fractionation inplants)

    SciTech Connect

    O'Leary, M.H.

    1990-01-01

    The objectives of this research are: To develop a theoretical and experimental framework for understanding isotope fractionations in plants; and to develop methods for using this isotope fractionation for understanding the dynamics of CO{sub 2} fixation in plants. Progress is described.

  7. Fractional dissipative standard map.

    PubMed

    Tarasov, Vasily E; Edelman, M

    2010-06-01

    Using kicked differential equations of motion with derivatives of noninteger orders, we obtain generalizations of the dissipative standard map. The main property of these generalized maps, which are called fractional maps, is long-term memory. The memory effect in the fractional maps means that their present state of evolution depends on all past states with special forms of weights. Already a small deviation of the order of derivative from the integer value corresponding to the regular dissipative standard map (small memory effects) leads to the qualitatively new behavior of the corresponding attractors. The fractional dissipative standard maps are used to demonstrate a new type of fractional attractors in the wide range of the fractional orders of derivatives.

  8. Tampa Bay Ecosystem Services webpage

    EPA Science Inventory

    Public website describing research on the large-scale physical, chemical, and biological dynamics of coastal wetlands and estuaries, with emphasis on the Gulf of Mexico. Hyperlinks direct users to mapped ecosystem services of interest and value to Tampa Bay area residents, and i...

  9. Bayes' estimators of generalized entropies

    NASA Astrophysics Data System (ADS)

    Holste, D.; Große, I.; Herzel, H.

    1998-03-01

    The order-q Tsallis 0305-4470/31/11/007/img5 and Rényi entropy 0305-4470/31/11/007/img6 receive broad applications in the statistical analysis of complex phenomena. A generic problem arises, however, when these entropies need to be estimated from observed data. The finite size of data sets can lead to serious systematic and statistical errors in numerical estimates. In this paper, we focus upon the problem of estimating generalized entropies from finite samples and derive the Bayes estimator of the order-q Tsallis entropy, including the order-1 (i.e. the Shannon) entropy, under the assumption of a uniform prior probability density. The Bayes estimator yields, in general, the smallest mean-quadratic deviation from the true parameter as compared with any other estimator. Exploiting the functional relationship between 0305-4470/31/11/007/img7 and 0305-4470/31/11/007/img8, we use the Bayes estimator of 0305-4470/31/11/007/img7 to estimate the Rényi entropy 0305-4470/31/11/007/img8. We compare these novel estimators with the frequency-count estimators for 0305-4470/31/11/007/img7 and 0305-4470/31/11/007/img8. We find by numerical simulations that the Bayes estimator reduces statistical errors of order-q entropy estimates for Bernoulli as well as for higher-order Markov processes derived from the complete genome of the prokaryote Haemophilus influenzae.

  10. Measurement of the inclusive semileptonic branching fraction of B mesons and @?V"c"b@? [rapid communication] Belle Collaboration, K. Abe, K. Abe, T. Abe, I. Adachi, B.S. Ahn, H. Aihara, M. Akatsu, Y. Asano, T. Aso, V. Aulchenko, T. Aushev, A.M. Bakich, Y. Ban, E. Banas, A. Bay, I. Bedny, P.K. Behera, A. Bondar,

    NASA Astrophysics Data System (ADS)

    Bozek, A.; Bracko, M.; Brodzicka, J.; Browder, T. E.; Casey, B. C. K.; Chang, P.; Chao, Y.; Cheon, B. G.; Chistov, R.; Choi, S.-K.; Choi, Y.; Danilov, M.; Dong, L. Y.; Drutskoy, A.; Eidelman, S.; Eiges, V.; Enari, Y.; Fang, F.; Fukunaga, C.; Gabyshev, N.; Garmash, A.; Gershon, T.; Golob, B.; Gotow, K.; Guo, R.; Hanagaki, K.; Handa, F.; Hara, K.; Hara, T.; Hastings, N. C.; Hayashii, H.; Hazumi, M.; Heenan, E. M.; Higuchi, I.; Higuchi, T.; Hojo, T.; Hokuue, T.; Hoshi, Y.; Hou, S. R.; Hou, W.-S.; Hsu, S.-C.; Huang, H.-C.; Igaki, T.; Igarashi, Y.; Iijima, T.; Inami, K.; Ishikawa, A.; Ishino, H.; Itoh, R.; Iwasaki, H.; Iwasaki, Y.; Jang, H. K.; Kakuno, H.; Kaneko, J.; Kang, J. H.; Kang, J. S.; Kapusta, P.; Kataoka, S. U.; Katayama, N.; Kawai, H.; Kawakami, Y.; Kawamura, N.; Kawasaki, T.; Kichimi, H.; Kim, D. W.; Kim, H.; Kim, H. J.; Kim, H. O.; Kim, H.; Kim, S. K.; Kim, T. H.; Kinoshita, K.; Kobayashi, S.; Krokovny, P.; Kulasiri, R.; Kumar, S.; Kuzmin, A.; Kwon, Y.-J.; Lange, J. S.; Leder, G.; Lee, S. H.; Li, J.; Limosani, A.; Liventsev, D.; Lu, R.-S.; MacNaughton, J.; Majumder, G.; Mandl, F.; Matsuishi, T.; Matsumoto, S.; Matsumoto, T.; Mikami, Y.; Mitaroff, W.; Miyabayashi, K.; Miyabayashi, Y.; Miyake, H.; Miyata, H.; Moloney, G. R.; Mori, T.; Nagamine, T.; Nagasaka, Y.; Nakadaira, T.; Nakano, E.; Nakao, M.; Nam, J. W.; Natkaniec, Z.; Neichi, K.; Nishida, S.; Nitoh, O.; Noguchi, S.; Nozaki, T.; Ogawa, S.; Ohno, F.; Ohshima, T.; Okabe, T.; Okuno, S.; Olsen, S. L.; Ostrowicz, W.; Ozaki, H.; Pakhlov, P.; Palka, H.; Park, C. W.; Park, H.; Park, K. S.; Peak, L. S.; Perroud, J.-P.; Peters, M.; Piilonen, L. E.; Ronga, F. J.; Root, N.; Rybicki, K.; Sagawa, H.; Saitoh, S.; Sakai, Y.; Sakamoto, H.; Satapathy, M.; Satpathy, A.; Schneider, O.; Schwanda, C.; Semenov, S.; Senyo, K.; Sevior, M. E.; Shibuya, H.; Shimoyama, M.; Shwartz, B.; Sidorov, V.; Singh, J. B.; Stanic, S.; Sugi, A.; Sugiyama, A.; Sumisawa, K.; Sumiyoshi, T.; Suzuki, K.; Suzuki, S.; Suzuki, S. Y.; Swain, S. K.; Takahashi, T.; Takasaki, F.; Tamai, K.; Tamura, N.; Tanaka, J.; Tanaka, M.; Taylor, G. N.; Teramoto, Y.; Tokuda, S.; Tomoto, M.; Tomura, T.; Tovey, S. N.; Trabelsi, K.; Tsuboyama, T.; Tsukamoto, T.; Uehara, S.; Ueno, K.; Unno, Y.; Uno, S.; Ushiroda, Y.; Varvell, K. E.; Wang, C. C.; Wang, C. H.; Wang, J. G.; Wang, M.-Z.; Watanabe, Y.; Won, E.; Yabsley, B. D.; Yamada, Y.; Yamaguchi, A.; Yamashita, Y.; Yamauchi, M.; Yashima, J.; Yoshida, K.; Yuan, Y.; Yusa, Y.; Zhang, C. C.; Zhang, J.; Zhang, Z. P.; Zheng, Y.; Zhilich, V.; Zhu, Z. M.; Zontar, D.

    2002-11-01

    We present a measurement of the electron spectrum from inclusive semileptonic {\\it B} decay, using 5.1 fb$^{-1}$ of $\\Upsilon(4S)$ data collected with the Belle detector. A high-momentum lepton tag was used to separate the semileptonic {\\it B} decay electrons from secondary decay electrons. We obtained the branching fraction, ${\\cal B}(B\\to X e^+ \

  11. Spatial variation of phytoplankton community structure in Daya Bay, China.

    PubMed

    Jiang, Zhao-Yu; Wang, You-Shao; Cheng, Hao; Zhang, Jian-Dong; Fei, Jiao

    2015-10-01

    Daya Bay is one of the largest and most important gulfs in the southern coast of China, in the northern part of the South China Sea. The phylogenetic diversity and spatial distribution of phytoplankton from the Daya Bay surface water and the relationship with the in situ water environment were investigated by the clone library of the large subunit of ribulose-1, 5-bisphosphate carboxylase (rbcL) gene. The dominant species of phytoplankton were diatoms and eustigmatophytes, which accounted for 81.9 % of all the clones of the rbcL genes. Prymnesiophytes were widely spread and wide varieties lived in Daya Bay, whereas the quantity was limited. The community structure of phytoplankton was shaped by pH and salinity and the concentration of silicate, phosphorus and nitrite. The phytoplankton biomass was significantly positively affected by phosphorus and nitrite but negatively by salinity and pH. Therefore, the phytoplankton distribution and biomass from Daya Bay were doubly affected by anthropic activities and natural factors.

  12. Biological interference of optical backscatterance sensors in Tampa Bay, Florida

    USGS Publications Warehouse

    Schoellhamer, D.H.

    1993-01-01

    Optical backscatterance (OBS, D&A Instruments, Inc.1 1 Use of brand, firm, or trade names in this paper is for identification purposes only and does not constitute endorsement by the U.S. Geological Survey.) sensors for measuring suspended-solids concentrations have been deployed in Tampa Bay to monitor resuspension of bottom sediments. This paper describes biological factors that affected the OBS sensors deployed in Tampa Bay and discusses deployment strategies that minimize biological interference. Phytoplankton may interfere with the OBS sensors when the suspended-solids concentration is near or below the sensor response threshold. Fish swimming in front of the OBS sensors caused spikes in the OBS sensor output, so the median average was more appropriate than the mean average. An algal slime on the OBS sensors caused excessive backscatterance that dominated the backscatterance from suspended material. Because of the fouling problem, deployments were limited to less than a week, and OBS sensors were cleaned daily, if possible. Calibration of OBS sensors with water samples collected from Tampa Bay was satisfactory when biological interference was not significant. When properly deployed, the OBS sensors can successfully monitor sediment resuspension in Tampa Bay and similar subtropical estuaries. ?? 1993.

  13. 76 FR 54380 - Safety Zone; Suttons Bay Labor Day Fireworks, Suttons Bay, Grand Traverse Bay, MI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-01

    ... waters of Suttons Bay, in the vicinity of the Municipal Marina, within the arc of a circle with a 500ft... litigation, eliminate ambiguity, and reduce burden. Protection of Children We have analyzed this rule under Executive Order 13045, Protection of Children from Environmental Health Risks and Safety Risks. This rule...

  14. Fractional calculus in bioengineering.

    PubMed

    Magin, Richard L

    2004-01-01

    Fractional calculus (integral and differential operations of noninteger order) is not often used to model biological systems. Although the basic mathematical ideas were developed long ago by the mathematicians Leibniz (1695), Liouville (1834), Riemann (1892), and others and brought to the attention of the engineering world by Oliver Heaviside in the 1890s, it was not until 1974 that the first book on the topic was published by Oldham and Spanier. Recent monographs and symposia proceedings have highlighted the application of fractional calculus in physics, continuum mechanics, signal processing, and electromagnetics, but with few examples of applications in bioengineering. This is surprising because the methods of fractional calculus, when defined as a Laplace or Fourier convolution product, are suitable for solving many problems in biomedical research. For example, early studies by Cole (1933) and Hodgkin (1946) of the electrical properties of nerve cell membranes and the propagation of electrical signals are well characterized by differential equations of fractional order. The solution involves a generalization of the exponential function to the Mittag-Leffler function, which provides a better fit to the observed cell membrane data. A parallel application of fractional derivatives to viscoelastic materials establishes, in a natural way, hereditary integrals and the power law (Nutting/Scott Blair) stress-strain relationship for modeling biomaterials. In this review, I will introduce the idea of fractional operations by following the original approach of Heaviside, demonstrate the basic operations of fractional calculus on well-behaved functions (step, ramp, pulse, sinusoid) of engineering interest, and give specific examples from electrochemistry, physics, bioengineering, and biophysics. The fractional derivative accurately describes natural phenomena that occur in such common engineering problems as heat transfer, electrode/electrolyte behavior, and sub

  15. Distinct Patterns of Picocyanobacterial Communities in Winter and Summer in the Chesapeake Bay ▿ †

    PubMed Central

    Cai, Haiyuan; Wang, Kui; Huang, Sijun; Jiao, Nianzhi; Chen, Feng

    2010-01-01

    In the Chesapeake Bay, picocyanobacteria were usually 100-fold less abundant in winter than in summer. However, little is known about how picocyanobacterial populations shift between winter and summer in the bay. This is due mainly to undetectable winter picocyanobacterial populations in bacterial 16S rRNA clone libraries. In this study, the winter and summer picocyanobacterial populations in the bay were detected using picocyanobacterium-specific primers and were compared based on the analysis of rRNA internal transcribed spacer sequences. Temperature was found to be the dominant environmental factor controlling picocyanobacterial populations in the Chesapeake Bay. In the summer, marine cluster B Synechococcus dominated the upper bay, while a unique cluster, CB1 (marine cluster A [MC-A] Synechococcus), made up the vast majority in the middle and lower bay. In the winter, the picocyanobacteria shifted to completely different populations. Subclades CB6 and CB7, which belong to MC-A Synechococcus and Cyanobium, respectively, made up the entire winter picocyanobacterial populations in the bay. Interestingly, the winter members in subclade CB6 clustered closely with Synechococcus CC9311, a coastal strain known to have a greater capacity to sense and respond to changing environments than oceanic strains. PMID:20228109

  16. Spatially and Temporally Detailed Modeling of Water Quality in Narragansett Bay

    NASA Astrophysics Data System (ADS)

    Charlestra, L.; Dettmann, E. H.; Abdelrhman, M.

    2014-12-01

    Nutrient loading to Narragansett Bay has led to eutrophication, resulting in hypoxia and anoxia, finfish and shellfish kills, loss of seagrass, and reductions in the recreational and economic value of the Bay. We are developing a model that simulates the effects of external nutrient and hydrologic loading on water quality in Narragansett Bay. Extensive field monitoring programs and process studies by the Narragansett Bay Commission, Federal and State agencies, municipalities, and university groups have been measuring physical parameters, nutrient concentrations and other water quality parameters in the Bay and its tributaries, nutrient inputs from wastewater treatment facilities, and process kinetic parameters. We are using data for existing nutrient concentrations, river flow and wastewater treatment facility effluent flow to estimate nutrient loading for non-sampled days using the U.S. Geological Survey's Load Estimator (LOADEST) software. The time-variable data so generated will be used as input to the U.S. Environmental Protection Agency's WASPEUTRO model linked with a calibrated three-dimensional hydrodynamic model, the Environmental Fluid Dynamics Code (EFDC). The primary objectives of the modeling effort are to simulate the effects of nutrient loading on dissolved oxygen concentrations and chlorophyll-a, an important parameter for water clarity and seagrass viability, to estimate the sensitivity of the Bay to changes in nutrient loading and freshwater inflow, and to explore the potential effects of management actions and other factors such as climate change on these water quality parameters in the Bay.

  17. The influence of bottom boundary layer hydrodynamics on sediment focusing in a contaminated bay.

    PubMed

    Graham, Neil D; Bouffard, Damien; Loizeau, Jean-Luc

    2016-12-01

    precipitating factors in sediment focusing. While the spread of contaminants from the bay may occur through the transport of fine suspended sediments in shallower zones of the bay (<60 m) by longshore littoral currents, results suggest that particle-bound contaminants are likely to remain within the bay.

  18. Polonium 210Po in the phytobenthos from Puck Bay.

    PubMed

    Skwarzec, B; Ulatowski, J; Strumińska, D I; Falandysz, J

    2003-04-01

    The aim of the work was to determine the 210Po content in phytobenthos species (seaweeds and angiosperms) from Puck Bay (southern Baltic). Alpha spectrometry was used to measure and calculate the activities and concentrations of polonium 210Po in the phytobenthos. The activity of 210Po in Puck Bay waters was determined to estimate the bioconcentration factors (BCF) of these plants. The 210Po concentration in water was estimated at 0.25 mBq dm(-3). The lowest polonium concentration in the phytobenthos was found in Cladophora rupestris (0.12 Bq kg(-1) wet wt.), the highest in Chara crinita (1.12 Bq kg(-1) wet wt.). Polonium is accumulated in these phytobenthos species; the bioconcentration factors (BCF) ranged from 450 to 4400.

  19. STS-90 payload bay door closure in OPF Bay 3

    NASA Technical Reports Server (NTRS)

    1998-01-01

    The STS-90 Neurolab payload and two of the four Getaway Specials (GAS) await payload bay door closure in the orbiter Columbia today in Orbiter Processing Facility bay 3. Investigations during the Neurolab mission will focus on the effects of microgravity on the nervous system. The mission is a joint venture of six space agencies and seven U.S. research agencies. Investigator teams from nine countries will conduct 31 studies in the microgravity environment of space. Other agencies participating in this mission include six institutes of the National Institutes of Health, the National Science Foundation, and the Office of Naval Research, as well as the space agencies of Canada, France, Germany, and Japan, and the European Space Agency (ESA).

  20. STS-90 payload bay door closure in OPF Bay 3

    NASA Technical Reports Server (NTRS)

    1998-01-01

    The STS-90 Neurolab payload and two of the four Getaway Specials (GAS) await payload bay door closure in the orbiter Columbia today in Orbiter Processing Facility bay 3. Investigations during the Neurolab mission will focus on the effects of microgravity on the nervous system. The GAS container on the left contains the COLLisions Into Dust Experiment, or COLLIDE, which will study low velocity collisions between space-borne particles in an attempt to better understand planetary ring dynamics. The STS-90 mission is a joint venture of six space agencies and seven U.S. research agencies. Agencies participating in this mission include six institutes of the National Institutes of Health, the National Science Foundation, and the Office of Naval Research, as well as the space agencies of Canada, France, Germany, and Japan, and the European Space Agency (ESA).

  1. Fractional market dynamics

    NASA Astrophysics Data System (ADS)

    Laskin, Nick

    2000-12-01

    A new extension of a fractality concept in financial mathematics has been developed. We have introduced a new fractional Langevin-type stochastic differential equation that differs from the standard Langevin equation: (i) by replacing the first-order derivative with respect to time by the fractional derivative of order μ; and (ii) by replacing “white noise” Gaussian stochastic force by the generalized “shot noise”, each pulse of which has a random amplitude with the α-stable Lévy distribution. As an application of the developed fractional non-Gaussian dynamical approach the expression for the probability distribution function (pdf) of the returns has been established. It is shown that the obtained fractional pdf fits well the central part and the tails of the empirical distribution of S&P 500 returns.

  2. Catalytic reforming of naphtha fractions

    SciTech Connect

    Bishop, K.C.; Vorhis, F.H.

    1980-09-16

    Production of motor gasoline and a btx-enriched reformate by fractionating a naphtha feedstock into a mid-boiling btxprecursor fraction, a relatively high-boiling fraction and a relatively low-boiling fraction; catalytically reforming the btxprecursor fraction in a first reforming zone; combining the relatively high-boiling and low-boiling fractions and catalytically reforming the combined fractions in a second reforming zone.

  3. Thermodynamics in Fractional Calculus

    NASA Astrophysics Data System (ADS)

    Meilanov, R. P.; Magomedov, R. A.

    2014-11-01

    A generalization of thermodynamics in the formalism of fractional-order derivatives is given. Results of the traditional thermodynamics of Carnot, Clausius, and Helmholtz are obtained in the particular case where the exponent of a fractional-order derivative is equal to unity. A one-parametric "fractal" equation of state is obtained with account of the second virial coefficient. The application of the resulting equation of state in the case of the gas argon is considered.

  4. Symmetric continued fractions

    SciTech Connect

    Panprasitwech, Oranit; Laohakosol, Vichian; Chaichana, Tuangrat

    2010-11-11

    Explicit formulae for continued fractions with symmetric patterns in their partial quotients are constructed in the field of formal power series. Similar to the work of Cohn in 1996, which generalized the so-called folding lemma to {kappa}-fold symmetry, the notion of {kappa}-duplicating symmetric continued fractions is investigated using a modification of the 1995 technique due to Clemens, Merrill and Roeder.

  5. Fractional laser skin resurfacing.

    PubMed

    Alexiades-Armenakas, Macrene R; Dover, Jeffrey S; Arndt, Kenneth A

    2012-11-01

    Laser skin resurfacing (LSR) has evolved over the past 2 decades from traditional ablative to fractional nonablative and fractional ablative resurfacing. Traditional ablative LSR was highly effective in reducing rhytides, photoaging, and acne scarring but was associated with significant side effects and complications. In contrast, nonablative LSR was very safe but failed to deliver consistent clinical improvement. Fractional LSR has achieved the middle ground; it combined the efficacy of traditional LSR with the safety of nonablative modalities. The first fractional laser was a nonablative erbium-doped yttrium aluminum garnet (Er:YAG) laser that produced microscopic columns of thermal injury in the epidermis and upper dermis. Heralding an entirely new concept of laser energy delivery, it delivered the laser beam in microarrays. It resulted in microscopic columns of treated tissue and intervening areas of untreated skin, which yielded rapid reepithelialization. Fractional delivery was quickly applied to ablative wavelengths such as carbon dioxide, Er:YAG, and yttrium scandium gallium garnet (2,790 nm), providing more significant clinical outcomes. Adjustable laser parameters, including power, pitch, dwell time, and spot density, allowed for precise determination of percent surface area, affected penetration depth, and clinical recovery time and efficacy. Fractional LSR has been a significant advance to the laser field, striking the balance between safety and efficacy.

  6. Virioplankton distribution and activity in a tropical eutrophicated bay

    NASA Astrophysics Data System (ADS)

    Bettarel, Yvan; Arfi, Robert; Bouvier, Thierry; Bouvy, Marc; Briand, Enora; Colombet, Jonathan; Corbin, Daniel; Sime-Ngando, Télesphore

    2008-11-01

    The study of lysogeny in aquatic systems is an often overlooked aspect of microbial ecology, especially in tropical environments. Herein, the fraction of lysogenized cells (FLC) was detected in the surface waters of 20 coastal stations distributed from the eutrophicated shoreline to seaward waters of Hann Bay (Senegal). Concurrently, viral lytic infection rates were extrapolated from the frequency of visibly infected bacterial cells (FVIC), as determined from transmission electron microscopy observations. The experimental induction of prophage was observed in less than 3% of indigenous marine bacteria, suggesting that lysogenic stages of infection are rare in Hann Bay. Similarly, only 0.5-4.7% of bacteria showed visible signs of lytic infection. However, the positive correlation between the fraction of lysogenic and lytic cells ( r = 0.67, p < 0.05, n = 20) may actually indicate that the coexistence of both lifestyles may be due to the massive and rapid induction of lysogens, potentially from the high levels of local UV radiation. Overall, we suggest that the determination of FVIC and FLC to examine the predominance of one type of cycle versus the other may be a source of misinterpretation in some particular aquatic environments.

  7. [Characteristics of Pahs pollution in sediments from Leizhou coastal marine area, Liusha Bay and Shenzhen Bay].

    PubMed

    Zhao, Li-Rong; Sun, Sheng-Li; Ke, Sheng

    2012-04-01

    Leizhou coastal marine area, Liusha Bay and Shenzhen Bay represented open coastal area and half-closed bay, respectively. This study discussed the differences of PAHs concentration levels, spatial distribution and sources in sediments from these three marine areas. The results showed that detected ratios of 15 PAHs were 100%, and major compounds were 3-ring and 4-ring PAHs, especialy Phe, Fla, Pry and Bbf; Sigma PAHs concentration was Leizhou < Shenzhen < Liusha. In spatial distribution, PAHs concentrations were the east < the south < the west in Leizhou; the inside > the outside, and the aquaculture > the non-aquaculture in Liusha Bay and Shenzhen Bay. It suggested that large-scale mariculture inside bay played an important role in PAHs pollution and might make it serious. Oil, fossil fuels and biomass burning were the dominant sources of PAHs in sediments from Leizhou coastal area, Liusha Bay and Shenzhen Bay.

  8. 75 FR 73121 - Bandon Marsh, Nestucca Bay, and Siletz Bay National Wildlife Refuges, Coos, Tillamook, and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-29

    ..., Tillamook, and Lincoln Counties, OR; Comprehensive Conservation Plan and Environmental Assessment AGENCY... prepare a comprehensive conservation plan (CCP) for the Bandon Marsh, Nestucca Bay, and Siletz Bay... with sound principles of fish and wildlife management, conservation, legal mandates, and our...

  9. The influence of climate, nutrient loading and predation on spatial and temporal changes in fish assemblages in Narragansett Bay

    EPA Science Inventory

    Estuarine fish are a highly valued resources that are affected by several factors, including climate, trophic interactions, pollution, and fishing pressure. Here, we examine the spatial and temporal patterns in estuarine fish assemblage in Narragansett Bay, an estuary located in...

  10. The Chesapeake Bay impact structure

    USGS Publications Warehouse

    Powars, David S.; Edwards, Lucy E.; Gohn, Gregory S.; Horton, Jr., J. Wright

    2015-10-28

    About 35 million years ago, during late Eocene time, a 2-mile-wide asteroid or comet smashed into Earth in what is now the lower Chesapeake Bay in Virginia. The oceanic impact vaporized, melted, fractured, and (or) displaced the target rocks and sediments and sent billions of tons of water, sediments, and rocks into the air. Glassy particles of solidified melt rock rained down as far away as Texas and the Caribbean. Models suggest that even up to 50 miles away the velocity of the intensely hot air blast was greater than 1,500 miles per hour, and ground shaking was equivalent to an earthquake greater than magnitude 8.0 on the Richter scale. Large tsunamis affected most of the North Atlantic basin. The Chesapeake Bay impact structure is among the 20 largest known impact structures on Earth.

  11. Nelson River and Hudson Bay

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Rivers that empty into large bodies of water can have a significant impact on the thawing of nearshore winter ice. This true-color Moderate Resolution Imaging Spectroradiometer (MODIS) image from May 18, 2001, shows the Nelson River emptying spring runoff from the Manitoba province to the south into the southwestern corner of Canada's Hudson Bay. The warmer waters from more southern latitudes hasten melting of ice near the shore, though some still remained, perhaps because in shallow coastal waters, the ice could have been anchored to the bottom. High volumes of sediment in the runoff turned the inflow brown, and the rim of the retreating ice has taken on a dirty appearance even far to the east of the river's entrance into the Bay. The sediment would have further hastened the melting of the ice because its darker color would have absorbed more solar radiation than cleaner, whiter ice. Image courtesy Jacques Descloitres, MODIS Land Rapid Response Team at NASA GSFC

  12. Bayes' theorem in paleopathological diagnosis.

    PubMed

    Byers, Steven N; Roberts, Charlotte A

    2003-05-01

    The utility of Bayes' theorem in paleopathological diagnoses is explored. Since this theorem has been used heavily by modern clinical medicine, its usefulness in that field is described first. Next, the mechanics of the theorem are discussed, along with methods for deriving the prior probabilities needed for its application. Following this, the sources of these prior probabilities and their accompanying problems in paleopathology are considered. Finally, an application using prehistoric rib lesions is presented to demonstrate the utility of this method to paleopathology.

  13. Interactions between finfish aquaculture and lobster catches in a sheltered bay.

    PubMed

    Loucks, Ronald H; Smith, Ruth E; Fisher, E Brian

    2014-11-15

    Interactions between open-net pen finfish aquaculture and lobster catches in a sheltered bay in Nova Scotia, Canada, were investigated using fishermen's participatory research in annual lobster trap surveys over seven years. Fishermen recorded lobster catches during the last two weeks of May from 2007 to 2013. Catches for each trap haul were recorded separately for ovigerous and market-sized lobsters. Catch trends within the bay were compared to regional trends. Results of correlation analyses indicated that ovigerous catch trends were strongly affected by the fish farm's feeding/fallow periods. There was no significant correlation between trends for bay and LFA lobster landings. Patterns of lobster catch per unit effort extending over considerable distance in Port Mouton Bay appear to be influenced by proximity to the fish farm regardless of year-to-year variation in water temperatures and weather conditions. Odours and habitat changes surrounding open-net pen finfish operations are potential factors affecting lobster displacement.

  14. Coastline Remote Sensing Monitoring and Change Analysis of Bohai Bay from 2000 to 2010

    NASA Astrophysics Data System (ADS)

    Ni, S.; Zhang, J.; Ma, Y.; Ren, G.

    2013-01-01

    Based on the extraction of coastline information by selecting 5 remotely sensed images of HJ-1B CCD and Landsat-7 ETM+ in the year of 2000, 2005 and 2010, change of coastline of Bohai bay in the first decade of 21st Century is analyzed. Results reveal that: (1) The whole coastline of Bohai Bay kept lengthening and moving seaward; (2) Among the littoral cities of Bohai Bay, the lengths of coastlines between Tangshan and Tianjin increased continuously; (3) Harbor coastline was the only one that continues to lengthen among 6 types of coastline; (4) The coastline types transformed mutually mainly in Binhai Developing Park of Tianjin, Caofeidian Developing Park of Tangshan, Tao-er River estuary and Yellow River estuary in Yellow River Delta. Construction and extension of saline, cultivated fields and harbors were the main driving factors causing the change of Bohai Bay coastline.

  15. Reduction of atherosclerosis in cholesterol-fed rabbits and decrease of expressions of intracellular adhesion molecule-1 and vascular endothelial growth factor in foam cells by a water-soluble fraction of Polygonum multiflorum.

    PubMed

    Yang, Peng-Yuan; Almofti, Mohamad Radwan; Lu, Ling; Kang, Hui; Zhang, Jing; Li, Tie-Jun; Rui, Yao-Cheng; Sun, Lian-Na; Chen, Wan-Sheng

    2005-11-01

    Polygonum multiflorum stilbeneglycoside (PMS) is a water-soluble fraction of Polygonum multiflorum Thunb., one of the most famous tonic traditional Chinese medicines, that has protective effects on the cardiovascular system. The purpose of the present study is to elucidate the effects of PMS on macrophage-derived foam cell functions and the reduction of severity of atherosclerosis in hypercholesterolemic New Zealand White (NZW) rabbits. NZW rabbits were fed for 12 weeks with a normal diet, a high cholesterol diet, or a high cholesterol diet associated with irrigation with different doses of PMS (25, 50, or 100 mg/kg). Treatment of NZW rabbits fed with high cholesterol diet with 100 mg/kg PMS attenuated the increase in plasma cholesterol, low-density lipoprotein cholesterol, very low-density lipoprotein cholesterol, and plasma triglyceride. Treatment with 50 and 100 mg/kg PMS caused 43% and 60% decrease in atherosclerotic lesioned area ratio to total surface area, respectively. In U937 foam cells, PMS could decrease the high expression of intercellular adhesion molecule (ICAM)-1 protein and the vascular endothelial growth factor (VEGF) protein levels in the medium induced by oxidized lipoprotein when analyzed by flow cytometry. The results proved that PMS is a powerful agent against atherosclerosis and that PMS action could possibly be through the inhibition of the expression of ICAM-1 and VEGF in foam cells.

  16. Terra Nova Bay Polynya, Antarctica

    NASA Technical Reports Server (NTRS)

    2007-01-01

    In Terra Nova Bay, off the Scott Coast of Victoria Land, Antarctica, a large pocket of open water persists throughout most of the Southern Hemisphere winter, even while most of the rest of the Antarctic coastline is firmly embraced by the frozen Southern Ocean. This pocket of open water--a polynya--results from exceptionally strong winds that blow downslope from the Trans-Antarctic Mountains. These fierce katabatic winds drive the sea ice eastward. Since the dominant ice drift pattern in the area is northward, the Drygalski Ice Tongue prevents the bay from being re-populated with sea ice. This image of the Terra Nova Bay polynya was captured by the Moderate Resolution Imaging Spectroradiometer (MODIS) on NASA's Aqua satellite on October 16, 2007. Sea ice sits over the Ross Sea like a cracked and crumbling windshield. Blue-tinged glaciers flow down from the Trans-Antarctic Mountains. Although glaciers can appear blue because of melt water, they can also get that tint when the wind scours and polishes the ice surface. Given the strength of the katabatic winds along this part of the Antarctic coast, it is likely that the blue color of these glaciers is a result of their having been swept clean of snow. The large image has a spatial resolution (level of detail) of 250 meters per pixel.

  17. Lithospheric architecture beneath Hudson Bay

    NASA Astrophysics Data System (ADS)

    Porritt, Robert W.; Miller, Meghan S.; Darbyshire, Fiona A.

    2015-07-01

    Hudson Bay overlies some of the thickest Precambrian lithosphere on Earth, whose internal structures contain important clues to the earliest workings of plate formation. The terminal collision, the Trans-Hudson Orogen, brought together the Western Churchill craton to the northwest and the Superior craton to the southeast. These two Archean cratons along with the Paleo-Proterozoic Trans-Hudson internides, form the core of the North American craton. We use S to P converted wave imaging and absolute shear velocity information from a joint inversion of P to S receiver functions, new ambient noise derived phase velocities, and teleseismic phase velocities to investigate this region and determine both the thickness of the lithosphere and the presence of internal discontinuities. The lithosphere under central Hudson Bay approaches ˜350 km thick but is thinner (˜200-250 km) around the periphery of the Bay. Furthermore, the amplitude of the LAB conversion from the S receiver functions is unusually large for a craton, suggesting a large thermal contrast across the LAB, which we interpret as direct evidence of the thermal insulation effect of continents on the asthenosphere. Within the lithosphere, midlithospheric discontinuities, significantly shallower than the base of the lithosphere, are often imaged, suggesting the mechanisms that form these layers are common. Lacking time-history information, we infer that these discontinuities reflect reactivation of formation structures during deformation of the craton.

  18. Lithospheric Architecture Beneath Hudson Bay

    NASA Astrophysics Data System (ADS)

    Porritt, R. W.; Miller, M. S.; Darbyshire, F. A.

    2015-12-01

    Hudson Bay overlies some of the thickest Precambrian lithosphere on Earth, whose internal structures contain important clues to the earliest workings of plate formation. The terminal collision, the Trans-Hudson Orogen, brought together the Western Churchill craton to the northwest and the Superior craton to the southeast. These two Archean cratons along with the Paleo-Proterozoic Trans-Hudson internides, form the core of the North American craton. We use S to P converted wave imaging and absolute shear velocity information from a joint inversion of P to S receiver functions, new ambient noise derived phase velocities, and teleseismic phase velocities to investigate this region and determine both the thickness of the lithosphere and the presence of internal discontinuities. The lithosphere under central Hudson Bay approaches 􏰂350 km thick but is thinner (􏰂200-250 km) around the periphery of the Bay. Furthermore, the amplitude of the lithosphere-asthenosphere boundary (LAB) conversion from the S receiver functions is unusually large for a craton, suggesting a large thermal contrast across the LAB, which we interpret as direct evidence of the thermal insulation effect of continents on the asthenosphere. Within the lithosphere, midlithospheric discontinuities, significantly shallower than the base of the lithosphere, are often imaged, suggesting the mechanisms that form these layers are common. Lacking time-history information, we infer that these discontinuities reflect reactivation of formation structures during deformation of the craton.

  19. Linear dimension reduction and Bayes classification

    NASA Technical Reports Server (NTRS)

    Decell, H. P., Jr.; Odell, P. L.; Coberly, W. A.

    1978-01-01

    An explicit expression for a compression matrix T of smallest possible left dimension K consistent with preserving the n variate normal Bayes assignment of X to a given one of a finite number of populations and the K variate Bayes assignment of TX to that population was developed. The Bayes population assignment of X and TX were shown to be equivalent for a compression matrix T explicitly calculated as a function of the means and covariances of the given populations.

  20. San Francisco and Bay Area, CA, USA

    NASA Technical Reports Server (NTRS)

    1991-01-01

    Although clouds obscure part of the city of San Francisco and the mouth of the Bay (37.5N, 122.0W), many cultural and natural features in the immediate vicinity are obvious. The Bay Bridge which was damaged in the 1989 earthquake, Candlestick Park, San Mateo and Dumbarton Bridges as well as the various colored settling ponds rimming the south end of the Bay, the San Andreas and Calaveras faults and many of the major highways can be seen.

  1. Electrochemically controlled iron isotope fractionation

    NASA Astrophysics Data System (ADS)

    Black, Jay R.; Young, Edward D.; Kavner, Abby

    2010-02-01

    Variations in the stable isotope abundances of transition metals have been observed in the geologic record and trying to understand and reconstruct the physical/environmental conditions that produced these signatures is an area of active research. It is clear that changes in oxidation state lead to large fractionations of the stable isotopes of many transition metals such as iron, suggesting that transition metal stable isotope signatures could be used as a paleo-redox proxy. However, the factors contributing to these observed stable isotope variations are poorly understood. Here we investigate how the kinetics of iron redox electrochemistry generates isotope fractionation. Through a combination of electrodeposition experiments and modeling of electrochemical processes including mass-transport, we show that electron transfer reactions are the cause of a large isotope separation, while mass transport-limited supply of reactant to the electrode attenuates the observed isotopic fractionation. Furthermore, the stable isotope composition of electroplated transition metals can be tuned in the laboratory by controlling parameters such as solution chemistry, reaction overpotential, and solution convection. These methods are potentially useful for generating isotopically-marked metal surfaces for tracking and forensic purposes. In addition, our studies will help interpret stable isotope data in terms of identifying underlying electron transfer processes in laboratory and natural samples.

  2. 78 FR 38580 - Special Local Regulation; Tall Ships Celebration Bay City, Bay City, MI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-06-27

    ... City, Bay City, MI AGENCY: Coast Guard, DHS. ACTION: Temporary final rule. SUMMARY: The Coast Guard is... regulatory act for the celebration specific to Bay City, MI, the Coast Guard recently published a separate... various events throughout the Great Lakes this summer, to include the Tall Ships Celebration Bay...

  3. 78 FR 45061 - Safety Zone; Sister Bay Marina Fest Fireworks and Ski Show, Sister Bay, WI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-26

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Sister Bay Marina Fest Fireworks and Ski... intended to restrict vessels from a portion of Sister Bay due to a fireworks display and ski show. This... with the fireworks display and ski show in Sister Bay on August 31, 2013. DATES: This rule is...

  4. 77 FR 44140 - Drawbridge Operation Regulation; Sturgeon Bay Ship Canal, Sturgeon Bay, WI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-27

    ... SECURITY Coast Guard 33 CFR Part 117 RIN 1625-AA09 Drawbridge Operation Regulation; Sturgeon Bay Ship Canal... drawbridge operating schedule for the Maple-Oregon and Michigan Street Bridges across the Sturgeon Bay Ship... drawbridges over Sturgeon Bay Ship Canal, including the two previously mentioned bridges as well as...

  5. 78 FR 46813 - Safety Zone; Evening on the Bay Fireworks; Sturgeon Bay, WI

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-02

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Evening on the Bay Fireworks; Sturgeon Bay... of Sturgeon Bay due to a fireworks display. This temporary safety zone is necessary to protect the surrounding public and vessels from the hazards associated with the fireworks display. DATES: This rule...

  6. 76 FR 38020 - Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-29

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Bay Point Fireworks, Bay Point Marina.... This Zone is intended to restrict vessels from portions of Lake Erie for the Bay Point Fireworks. This... fireworks displays. DATES: This regulation is effective from 10 p.m. on July 2, 2011 through 10:20 p.m....

  7. Real World: NASA and the Chesapeake Bay

    NASA Video Gallery

    Learn how NASA uses Earth observing satellites to monitor conditions in the Chesapeake Bay over time. Information about pollution, eutrophication, land cover and watershed runoff helps water manage...

  8. Role of remote sensing in Bay measurements

    NASA Technical Reports Server (NTRS)

    Mugler, J. P., Jr.; Godfrey, J. P.; Hickman, G. D.; Hovis, W. G.; Pearson, A. O.; Weaver, K. N.

    1978-01-01

    Remote measurements of a number of surface or near surface parameters for baseline definition and specialized studies, remote measurements of episodic events, and remote measurements of the Bay lithosphere are considered in terms of characterizing and understanding the ecology of the Chesapeake Bay. Geologic processes and features best suited for information enhancement by remote sensing methods are identified. These include: (1) rates of sedimentation in the Bay; (2) rates of erosion of Bay shorelines; (3) spatial distribution and geometry of aquifers; (4) mapping of Karst terrain (sinkholes); and (5) mapping of fracture patterns. Recommendations for studying problem areas identified are given.

  9. Polychlorinated biphenyls (PCBs) in San Francisco Bay.

    PubMed

    Davis, J A; Hetzel, F; Oram, J J; McKee, L J

    2007-09-01

    San Francisco Bay is facing a legacy of polychlorinated biphenyls (PCBs) spread widely across the land surface of the watershed, mixed deep into the sediment of the Bay, and contaminating the Bay food web to a degree that poses health risks to humans and wildlife. In response to this persistent problem, water quality managers are establishing a PCB total maximum daily load (TMDL) and implementation plan to accelerate the recovery of the Bay from decades of PCB contamination. This article provides a review of progress made over the past 15 years in managing PCBs and understanding their sources, pathways, fate, and effects in the Bay, and highlights remaining information needs that should be addressed in the next 10 years. The phaseout of PCBs during the 1970s and the 1979 federal ban on sale and production led to gradual declines from the 1970s to the present. However, 25 years after the ban, PCB concentrations in some Bay sport fish today are still more than ten times higher than the threshold of concern for human health. Without further management action it appears that the general recovery of the Bay from PCB contamination will take many more decades. PCB concentrations in sport fish were, along with mercury, a primary cause of a consumption advisory for the Bay and the consequent classification of the Bay as an impaired water body. Several sources of information indicate that PCB concentrations in the Bay may also be high enough to adversely affect wildlife, including rare and endangered species. The greater than 90% reduction in food web contamination needed to meet the targets for protection of human health would likely also generally eliminate risks to wildlife. PCB contamination in the Bay is primarily associated with industrial areas along the shoreline and in local watersheds. Strong spatial gradients in PCB concentrations persist decades after the release of these chemicals to Bay Area waterways. Through the TMDL process, attention is being more sharply

  10. Detecting the spatial and temporal variability of chlorophylla concentration and total suspended solids in Apalachicola Bay, Florida using MODIS imagery

    USGS Publications Warehouse

    Wang, Hongfang; Hladik, C.M.; Huang, W.; Milla, K.; Edmiston, L.; Harwell, M.A.; Schalles, J.F.

    2010-01-01

    Apalachicola Bay, Florida, accounts for 90% of Florida's and 10% of the nation's eastern oyster (Crassostrea virginica) harvesting. Chlorophyll-a concentration and total suspended solids (TSS) are two important water quality variables, among other environmental factors such as salinity, for eastern oyster production in Apalachicola Bay. In this research, we developed regression models of the relationships between the reflectance of the Moderate-Resolution Imaging Spectroradiometer (MODIS) Terra 250 m data and the two water quality variables based on the Bay-wide field data collected during 14-17 October 2002, a relatively dry period, and 3-5 April 2006, a relatively wet period, respectively. Then we selected the best regression models (highest coefficient of determination, R2) to derive Bay-wide maps of chlorophylla concentration and TSS for the two periods. The MODIS-derived maps revealed large spatial and temporal variations in chlorophylla concentration and TSS across the entire Apalachicola Bay. ?? 2010 Taylor & Francis.

  11. Modeling spatial and temporal variation of suitable nursery habitats for Atlantic sturgeon in the Chesapeake Bay

    NASA Astrophysics Data System (ADS)

    Niklitschek, Edwin J.; Secor, David H.

    2005-07-01

    For rare and endangered species, bioenergetics modeling can represent a valuable approach for understanding issues of habitat value and connectivity among potential habitats within nurseries in restoration programs. We used multivariable bioenergetics and survival models for Atlantic sturgeon to generate spatially explicit maps of potential production in the Chesapeake Bay. For the period 1993-2002, spatial and temporal patterns in water quality effects (temperature, dissolved oxygen [DO] and salinity) on potential production were evaluated. In addition, two forecasted scenarios were modeled: one implementing newly revised U.S. Environmental Protection Agency (EPA) DO-criteria for the Chesapeake Bay, and the other assuming a bay-wide increase of 1 °C due to an underlying trend in regional climate. Atlantic sturgeon's low (survival/growth) tolerance to temperatures >28 °C was a critical constraint during their first 1-2 summers of life. Hatched in freshwater (spring to mid-summer), young-of-the-year were predicted to occupy cooler (deeper) areas as temperature approached sub-lethal levels. While most thermal refuges were located down-estuary, a large fraction of potential refuges were unsuitable due to persistent hypoxia and/or salinity levels beyond the limited osmoregulatory capabilities of early juvenile Atlantic sturgeon. As a result, suitable summer habitats for juvenile Atlantic sturgeons in the Chesapeake Bay were predicted to be spatially restricted and variable between years, ranging from 0 to 35% of the modeled bay surface area. In critical (drought) years, almost no summer habitat was predicted to be available for juvenile Atlantic sturgeon. Value and size of nursery habitat was highly sensitive to climatic oscillations and anthropogenic interventions affecting freshwater inflow, water temperature and/or DO. Achieving EPA DO-criteria for the Chesapeake Bay was predicted to increase total suitable habitat by 13% for an average year, while increasing

  12. Identifying Fractions on Number Lines.

    ERIC Educational Resources Information Center

    Bright, George W.; And Others

    1988-01-01

    This study investigated the ways students represented fractions on number lines and the effects of instruction on those representations. The instruction primarily concerned representing fractions and ordering fractions on number lines. (Author/PK)

  13. Sources of mercury to San Francisco Bay surface sediment as revealed by mercury stable isotopes

    NASA Astrophysics Data System (ADS)

    Gehrke, Gretchen E.; Blum, Joel D.; Marvin-DiPasquale, Mark

    2011-02-01

    Mercury (Hg) concentrations and isotopic compositions were examined in shallow-water surface sediment (0-2 cm) from San Francisco (SF) Bay to determine the extent to which historic Hg mining contributes to current Hg contamination in SF Bay, and to assess the use of Hg isotopes to trace sources of contamination in estuaries. Inter-tidal and wetland sediment had total Hg (Hg T) concentrations ranging from 161 to 1529 ng/g with no simple gradients of spatial variation. In contrast, inter-tidal and wetland sediment displayed a geographic gradient of δ 202Hg values, ranging from -0.30‰ in the southern-most part of SF Bay (draining the New Almaden Hg District) to -0.99‰ in the northern-most part of SF Bay near the Sacramento-San Joaquin River Delta. Similar to SF Bay inter-tidal sediment, surface sediment from the Alviso Slough channel draining into South SF Bay had a δ 202Hg value of -0.29‰, while surface sediment from the Cosumnes River and Sacramento-San Joaquin River Delta draining into north SF Bay had lower average δ 202Hg values of -0.90‰ and -0.75‰, respectively. This isotopic trend suggests that Hg-contaminated sediment from the New Almaden Hg District mixes with Hg-contaminated sediment from a low δ 202Hg source north of SF Bay. Tailings and thermally decomposed ore (calcine) from the New Idria Hg mine in the California Coast Range had average δ 202Hg values of -0.37 and +0.03‰, respectively, showing that Hg calcination fractionates Hg isotopes resulting in Hg contamination from Hg(II) mine waste products with higher δ 202Hg values than metallic Hg(0) produced from Hg mines. Thus, there is evidence for at least two distinct isotopic signals for Hg contamination in SF Bay: Hg associated with calcine waste materials at Hg mines in the Coast Range, such as New Almaden and New Idria; and Hg(0) produced from these mines and used in placer gold mines and/or in other industrial processes in the Sierra Nevada region and SF Bay area.

  14. Sources of mercury to San Francisco Bay surface sediment as revealed by mercury stable isotopes

    USGS Publications Warehouse

    Gehrke, Gretchen E.; Blum, Joel D.; Marvin-DePasquale, Mark

    2011-01-01

    Mercury (Hg) concentrations and isotopic compositions were examined in shallow-water surface sediment (0–2 cm) from San Francisco (SF) Bay to determine the extent to which historic Hg mining contributes to current Hg contamination in SF Bay, and to assess the use of Hg isotopes to trace sources of contamination in estuaries. Inter-tidal and wetland sediment had total Hg (HgT) concentrations ranging from 161 to 1529 ng/g with no simple gradients of spatial variation. In contrast, inter-tidal and wetland sediment displayed a geographic gradient of δ202Hg values, ranging from -0.30% in the southern-most part of SF Bay (draining the New Almaden Hg District) to -0.99% in the northern-most part of SF Bay near the Sacramento–San Joaquin River Delta. Similar to SF Bay inter-tidal sediment, surface sediment from the Alviso Slough channel draining into South SF Bay had a δ202Hg value of -0.29%, while surface sediment from the Cosumnes River and Sacramento–San Joaquin River Delta draining into north SF Bay had lower average δ202Hg values of -0.90% and -0.75%, respectively. This isotopic trend suggests that Hg-contaminated sediment from the New Almaden Hg District mixes with Hg-contaminated sediment from a low δ202Hg source north of SF Bay. Tailings and thermally decomposed ore (calcine) from the New Idria Hg mine in the California Coast Range had average δ202Hg values of -0.37 and +0.03%, respectively, showing that Hg calcination fractionates Hg isotopes resulting in Hg contamination from Hg(II) mine waste products with higher δ202Hg values than metallic Hg(0) produced from Hg mines. Thus, there is evidence for at least two distinct isotopic signals for Hg contamination in SF Bay: Hg associated with calcine waste materials at Hg mines in the Coast Range, such as New Almaden and New Idria; and Hg(0) produced from these mines and used in placer gold mines and/or in other industrial processes in the Sierra Nevada region and SF Bay area.

  15. Consistent assessment of trace metal contamination in surface sediments and suspended particulate matter: a case study from the Jade Bay in NW Germany.

    PubMed

    Beck, Melanie; Böning, Philipp; Schückel, Ulrike; Stiehl, Thorsten; Schnetger, Bernhard; Rullkötter, Jürgen; Brumsack, Hans-Jürgen

    2013-05-15

    Recently, within the framework of European directives, the importance of marine monitoring programs has increased. In this study, a dense sampling grid was applied for a detailed assessment of the metal contents of surface sediments and suspended particulate matter from the Jade Bay, one of the tidal basins in the southern North Sea. The local lithogenic background was defined and compared with average shale, a common reference material. Based on the calculated non-lithogenic fraction and a cluster analysis, the metals are distributed in two groups: (i) elements of mainly natural origin (Co, Cr, and a major portion of Cd) and (ii) elements associated with anthropogenic activity (As, Cd, Cu, Ni, Pb, Sn, and Zn). However, even the metals of the second group are enriched by at most a factor of two relative to the local background, suggesting minimal anthropogenic impact. Spatial distribution maps show that the harbor area of Wilhelmshaven may be a particularly important source of metal.

  16. 1. Aerial view, looking northeast up Newark Bay, showing entire ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. Aerial view, looking northeast up Newark Bay, showing entire island Charles Wisniewski, photographer, January 1985 - Shooters Island, Ships Graveyard, Newark Bay, Staten Island (subdivision), Richmond County, NY

  17. Release Fraction Evaluation

    SciTech Connect

    Bamberger, Judith A.; Glissmeyer, John A.

    2004-01-01

    This document presents results of experiments conducted to measure release fractions during certain tank retrieval processes. The tests were performed in a 1/4 scale model of a waste storage tank. The retrieval processes simulated were: (1) Discharging liquid or slurry from the mouth of a vertically oriented two-in. Schedule 40 pipe. The discharging material was in free-fall from the mouth of the pipe near the top of the tank into a liquid or slurry pool at the bottom of the tank. (2) The jet from a 9/16-in.-diameter nozzle transferring liquid or slurry waste from one side of the tank to the other. The discharging liquid was aimed at the opposite side of the tank from the nozzle and either impacted the tank wall or fell into a liquid or slurry pool in the bottom of the tank. (3) A high pressure fan jet of liquid striking a steel plate or simulated waste from a stand-off distance of a few inches. For each process, a water-soluble fluorescent dye was added to the liquid fraction as a tracer. Kaolin clay was used to represent the solids. The tank was covered and there was no forced ventilation in the tank during the tests. Six air samples were collected during each test. The air samples were collected at fixed positions in the tank. The air sample filters were dried and weighed to determine the solids collection. The fluorescent dye was then leached from each filter and quantified with a fluorometer to determine the collection of liquid. Samples of the slurry and liquid simulants were also collected to determine the quantities of simulant used in each test. To calculate the release fraction, the quantity collected on each air sample was adjusted for the fraction of the tank volume sampled and divided by the quantity of material exposed in the simulation. The method was not as sensitive for the solids content as it was for the liquid content, but in those instances where a solids release fraction was determined, it was in relatively good agreement with that of the

  18. FRACTIONAL CRYSTALLIZATION FEED ENVELOPE

    SciTech Connect

    HERTING DL

    2008-03-19

    Laboratory work was completed on a set of evaporation tests designed to establish a feed envelope for the fractional crystallization process. The feed envelope defines chemical concentration limits within which the process can be operated successfully. All 38 runs in the half-factorial design matrix were completed successfully, based on the qualitative definition of success. There is no feed composition likely to be derived from saltcake dissolution that would cause the fractional crystallization process to not meet acceptable performance requirements. However, some compositions clearly would provide more successful operation than other compositions.

  19. Structuring of Bacterioplankton Diversity in a Large Tropical Bay

    PubMed Central

    Gregoracci, Gustavo B.; Nascimento, Juliana R.; Cabral, Anderson S.; Paranhos, Rodolfo; Valentin, Jean L.; Thompson, Cristiane C.; Thompson, Fabiano L.

    2012-01-01

    Structuring of bacterioplanktonic populations and factors that determine the structuring of specific niche partitions have been demonstrated only for a limited number of colder water environments. In order to better understand the physical chemical and biological parameters that may influence bacterioplankton diversity and abundance, we examined their productivity, abundance and diversity in the second largest Brazilian tropical bay (Guanabara Bay, GB), as well as seawater physical chemical and biological parameters of GB. The inner bay location with higher nutrient input favored higher microbial (including vibrio) growth. Metagenomic analysis revealed a predominance of Gammaproteobacteria in this location, while GB locations with lower nutrient concentration favored Alphaproteobacteria and Flavobacteria. According to the subsystems (SEED) functional analysis, GB has a distinctive metabolic signature, comprising a higher number of sequences in the metabolism of phosphorus and aromatic compounds and a lower number of sequences in the photosynthesis subsystem. The apparent phosphorus limitation appears to influence the GB metagenomic signature of the three locations. Phosphorus is also one of the main factors determining changes in the abundance of planktonic vibrios, suggesting that nutrient limitation can be observed at community (metagenomic) and population levels (total prokaryote and vibrio counts). PMID:22363639

  20. 33 CFR 110.224 - San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... maintained by a person who fluently speaks the English language. b. Each vessel using this anchorage may not... the west shore of San Francisco Bay and the following lines: Beginning on the shore southwest of Point...) Anchorage No. 5, Southampton Shoal. In San Francisco Bay at Southampton Shoal bounded by a line...

  1. 33 CFR 110.224 - San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, Sacramento River, San Joaquin...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... maintained by a person who fluently speaks the English language. b. Each vessel using this anchorage may not... the west shore of San Francisco Bay and the following lines: Beginning on the shore southwest of Point...) Anchorage No. 5, Southampton Shoal. In San Francisco Bay at Southampton Shoal bounded by a line...

  2. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 100 yards of the Shell Terminal, Martinez, CA, and encompasses all waters in San Pablo Bay within a... the Amorco Pier, Martinez, CA, and encompasses all waters in the Carquinez Strait within a line..., Martinez, CA, and encompasses all waters in Suisun Bay within a line connecting the following...

  3. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 100 yards of the Shell Terminal, Martinez, CA, and encompasses all waters in San Pablo Bay within a... the Amorco Pier, Martinez, CA, and encompasses all waters in the Carquinez Strait within a line..., Martinez, CA, and encompasses all waters in Suisun Bay within a line connecting the following...

  4. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 100 yards of the Shell Terminal, Martinez, CA, and encompasses all waters in San Pablo Bay within a... the Amorco Pier, Martinez, CA, and encompasses all waters in the Carquinez Strait within a line..., Martinez, CA, and encompasses all waters in Suisun Bay within a line connecting the following...

  5. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 100 yards of the Shell Terminal, Martinez, CA, and encompasses all waters in San Pablo Bay within a... the Amorco Pier, Martinez, CA, and encompasses all waters in the Carquinez Strait within a line..., Martinez, CA, and encompasses all waters in Suisun Bay within a line connecting the following...

  6. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 100 yards of the Shell Terminal, Martinez, CA, and encompasses all waters in San Pablo Bay within a... the Amorco Pier, Martinez, CA, and encompasses all waters in the Carquinez Strait within a line..., Martinez, CA, and encompasses all waters in Suisun Bay within a line connecting the following...

  7. Distribution and pollution assessment of trace elements in marine sediments in the Quintero Bay (Chile).

    PubMed

    Parra, Sonnia; Bravo, Manuel A; Quiroz, Waldo; Querol, Xavier; Paipa, Carolina

    2015-10-15

    The aim of this study was to assess the levels of heavy metal pollution in the clay/silt fraction (<63 μm fraction) of marine sediments from Quintero Bay, Chile. For this, sediment samples were collected from 14 sites from the bay and analyzed for major and minor element determination. The metal concentrations found suggest an anthropogenic origin related with Cu, Se, Mo, As, Sb and Pb. The mineralogical characteristics of the samples were determined by XRD and selected samples were examined by SEM to determine morphological differences. The results showed heavy metal-bearing particles such as Cu, Zn, As and Pb, which are most likely associated with by the copper smelter.

  8. The organic fraction of bubble-generated, accumulation mode Sea Spray Aerosol (SSA)

    NASA Astrophysics Data System (ADS)

    Modini, R. L.; Harris, B.; Ristovski, Z. D.

    2010-03-01

    Recent studies have detected a dominant accumulation mode (~100 nm) in the Sea Spray Aerosol (SSA) number distribution. There is evidence to suggest that particles in this mode are composed primarily of organics. To investigate this hypothesis we conducted experiments on NaCl, artificial SSA and natural SSA particles with a Volatility-Hygroscopicity-Tandem-Differential-Mobility-Analyser (VH-TDMA). NaCl particles were atomiser generated and a bubble generator was constructed to produce artificial and natural SSA particles. Natural seawater samples for use in the bubble generator were collected from biologically active, terrestrially-affected coastal water in Moreton Bay, Australia. Differences in the VH-TDMA-measured volatility curves of artificial and natural SSA particles were used to investigate and quantify the organic fraction of natural SSA particles. Hygroscopic Growth Factor (HGF) data, also obtained by the VH-TDMA, were used to confirm the conclusions drawn from the volatility data. Both datasets indicated that the organic fraction of our natural SSA particles evaporated in the VH-TDMA over the temperature range 170-200 °C. The organic volume fraction for 71-77 nm natural SSA particles was 8±6%. Organic volume fraction did not vary significantly with varying water residence time (40 s to 24 h) in the bubble generator or SSA particle diameter in the range 38-173 nm. At room temperature we measured shape- and Kelvin-corrected HGF at 90% RH of 2.46±0.02 for NaCl, 2.35±0.02 for artifical SSA and 2.26±0.02 for natural SSA particles. Overall, these results suggest that the natural accumulation mode SSA particles produced in these experiments contained only a minor organic fraction, which had little effect on hygroscopic growth. Our measurement of 8±6% is an order of magnitude below two previous measurements of the organic fraction in SSA particles of comparable sizes. We stress that our results were obtained using coastal seawater and they can't necessarily

  9. The organic fraction of bubble-generated, accumulation mode Sea Spray Aerosol (SSA)

    NASA Astrophysics Data System (ADS)

    Modini, R. L.; Harris, B.; Ristovski, Z. D.

    2009-10-01

    Recent studies have detected a dominant accumulation mode (~100 nm) in the Sea Spray Aerosol (SSA) number distribution. There is evidence to suggest that particles in this mode are composed primarily of organics. To investigate this hypothesis we conducted experiments on NaCl, artificial SSA and natural SSA particles with a Volatility-Hygroscopicity-Tandem-Differential-Mobility-Analyser (VH-TDMA). NaCl particles were atomiser generated and a bubble generator was constructed to produce artificial and natural SSA particles. Natural seawater samples for use in the bubble generator were collected from biologically active, terrestrially-affected coastal water in Moreton Bay, Australia. Differences in the VH-TDMA-measured volatility curves of artificial and natural SSA particles were used to investigate and quantify the organic fraction of natural SSA particles. Hygroscopic Growth Factor (HGF) data, also obtained by the VH-TDMA, were used to confirm the conclusions drawn from the volatility data. Both datasets indicated that the organic fraction of our natural SSA particles evaporated in the VH-TDMA over the temperature range 170-200°C. The organic volume fraction for 71-77 nm natural SSA particles was 8±6%. Organic volume fraction did not vary significantly with varying water residence time (40 s0 to 24 h) in the bubble generator or SSA particle diameter in the range 38-173 nm. At room temperature we measured shape- and Kelvin-corrected HGF at 90% RH of 2.46±0.02 for NaCl, 2.35±0.02 for artifical SSA and 2.26±0.02 for natural SSA particles. Overall, these results suggest that the natural accumulation mode SSA particles produced in these experiments contained only a minor organic fraction, which had little effect on hygroscopic growth. Our measurement of 8±6% is an order of magnitude below two previous measurements of the organic fraction in SSA particles of comparable sizes. Further studies with a variety of different seawaters are required to better quantify how

  10. Development of a Hydrodynamic and Transport model of Bellingham Bay in Support of Nearshore Habitat Restoration

    SciTech Connect

    Wang, Taiping; Yang, Zhaoqing; Khangaonkar, Tarang

    2010-04-22

    root mean square error values for surface elevation, velocity, temperature, and salinity time series are 0.11 m, 0.10 m/s, 1.28oC, and 1.91 ppt, respectively. The model was able to reproduce the salinity and temperature stratifications inside Bellingham Bay. Wetting and drying processes in tidal flats in Bellingham Bay, Samish Bay, and Padilla Bay were also successfully simulated. Both model results and observed data indicated that water surface elevations inside Bellingham Bay are highly correlated to tides. Circulation inside the bay is weak and complex and is affected by various forcing mechanisms, including tides, winds, freshwater inflows, and other local forcing factors. The Bellingham Bay model solution was successfully linked to the NOAA oil spill trajectory simulation model “General NOAA Operational Modeling Environment (GNOME).” Overall, the Bellingham Bay model has been calibrated reasonably well and can be used to provide detailed hydrodynamic information in the bay and adjacent water bodies. While there is room for further improvement with more available data, the calibrated hydrodynamic model provides useful hydrodynamic information in Bellingham Bay and can be used to support sediment transport and water quality modeling as well as assist in the design of nearshore restoration scenarios.

  11. Heavy metal pollution assessment in sediments of the Izmit Bay, Turkey.

    PubMed

    Pekey, Hakan

    2006-12-01

    Surface sediments in the fraction < 63 microm collected from eight stations along the north coastline of Izmit Bay, north-eastern Marmara Sea, Turkey, were analyzed for major (organic carbon, Al, Ba, Fe and Mg) and trace (As, Cd, Co, Cr, Cu, Mo, Ni, Pb and Zn) elements by using inductively coupled plasma atomic emission spectrometry (ICP-AES). Sediments heavily contaminated are evaluated by the Sediment Quality Guidelines (SQG) of US EPA. The results were compared with the marine sediment quality standards (SQS), as well as literature values reported to assess the pollution status of the sediments. The enrichment factors (EFs) were calculated to evaluate actual level of contamination for all the elements using the earth crust as reference matrix, based on elemental values by Mason which show a normal pattern near to unity. The analysis revealed two groups of elements: (i) Arsenic, Cd, Pb, and Zn are the most enriched elements; (ii) Barium, Co, Cr, Cu, Fe, Mg, Mo and Ni are at background levels. The results show that road traffic run-offs, paint industries and coal combustion are among the most significant sources.

  12. 76 FR 2085 - National Estuarine Research Reserve System; North Inlet-Winyah Bay, SC and San Francisco Bay, CA...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-12

    ... support of the Bay's growing population: Climate change, species interactions, water quality, and habitat...- Winyah Bay such as impacts from coastal and watershed development, climate events on coastal...

  13. Momentum fractionation on superstrata

    SciTech Connect

    Bena, Iosif; Martinec, Emil; Turton, David; Warner, Nicholas P.

    2016-05-11

    Superstrata are bound states in string theory that carry D1, D5, and momentum charges, and whose supergravity descriptions are parameterized by arbitrary functions of (at least) two variables. In the D1-D5 CFT, typical three-charge states reside in highdegree twisted sectors, and their momentum charge is carried by modes that individually have fractional momentum. Understanding this momentum fractionation holographically is crucial for understanding typical black-hole microstates in this system. We use solution-generating techniques to add momentum to a multi-wound supertube and thereby construct the first examples of asymptotically-flat superstrata. The resulting supergravity solutions are horizonless and smooth up to well-understood orbifold singularities. Upon taking the AdS3 decoupling limit, our solutions are dual to CFT states with momentum fractionation. We give a precise proposal for these dual CFT states. Lastly, our construction establishes the very nontrivial fact that large classes of CFT states with momentum fractionation can be realized in the bulk as smooth horizonless supergravity solutions.

  14. Momentum fractionation on superstrata

    DOE PAGES

    Bena, Iosif; Martinec, Emil; Turton, David; ...

    2016-05-11

    Superstrata are bound states in string theory that carry D1, D5, and momentum charges, and whose supergravity descriptions are parameterized by arbitrary functions of (at least) two variables. In the D1-D5 CFT, typical three-charge states reside in highdegree twisted sectors, and their momentum charge is carried by modes that individually have fractional momentum. Understanding this momentum fractionation holographically is crucial for understanding typical black-hole microstates in this system. We use solution-generating techniques to add momentum to a multi-wound supertube and thereby construct the first examples of asymptotically-flat superstrata. The resulting supergravity solutions are horizonless and smooth up to well-understood orbifoldmore » singularities. Upon taking the AdS3 decoupling limit, our solutions are dual to CFT states with momentum fractionation. We give a precise proposal for these dual CFT states. Lastly, our construction establishes the very nontrivial fact that large classes of CFT states with momentum fractionation can be realized in the bulk as smooth horizonless supergravity solutions.« less

  15. Sweet Work with Fractions

    ERIC Educational Resources Information Center

    Vinogradova, Natalya; Blaine, Larry

    2013-01-01

    Almost everyone loves chocolate. However, the same cannot be said about fractions, which are loved by markedly fewer. Middle school students tend to view them with wary respect, but little affection. The authors attempt to sweeten the subject by describing a type of game involving division of chocolate bars. The activity they describe provides a…

  16. Field-Flow Fractionation.

    ERIC Educational Resources Information Center

    Caldwell, Karin D.

    1988-01-01

    Describes a technique for separating samples that range over 15 orders of magnitude in molecular weight. Discusses theory, apparatus, and sample preparation techniques. Lists several types of field-flow fractionation (FFF) and their uses: sedimentation FFF, thermal FFF, flow FFF, electrical FFF, and steric FFF. (ML)

  17. Fraction collector for electrophoresis

    NASA Technical Reports Server (NTRS)

    Bier, M.

    1977-01-01

    Rotating-tube electrophoresis apparatus employs rotating jet of eluting buffer to reduce effects of convection during separation. Designed for separation of microorganisms and biological species, system combines gravity/gradient compensating of lumen with buffer flush at fraction outlet to increase separation efficiency.

  18. Isotopic fractionation of tritium in biological systems.

    PubMed

    Le Goff, Pierre; Fromm, Michel; Vichot, Laurent; Badot, Pierre-Marie; Guétat, Philippe

    2014-04-01

    Isotopic fractionation of tritium is a highly relevant issue in radiation protection and requires certain radioecological considerations. Sound evaluation of this factor is indeed necessary to determine whether environmental compartments are enriched/depleted in tritium or if tritium is, on the contrary, isotopically well-distributed in a given system. The ubiquity of tritium and the standard analytical methods used to assay it may induce biases in both the measurement and the signification that is accorded to the so-called fractionation: based on an exhaustive review of the literature, we show how, sometimes large deviations may appear. It is shown that when comparing the non-exchangeable fraction of organically bound tritium (neOBT) to another fraction of tritium (e.g. tritiated water) the preparation of samples and the measurement of neOBT reported frequently led to underestimation of the ratio of tritium to hydrogen (T/H) in the non-exchangeable compartment by a factor of 5% to 50%. In the present study, corrections are proposed for most of the biological matrices studied so far. Nevertheless, the values of isotopic fractionation reported in the literature remain difficult to compare with each other, especially since the physical quantities and units often vary between authors. Some improvements are proposed to better define what should encompass the concepts of exchangeable and non-exchangeable fractions.

  19. Evaluating Bay Area Methane Emission Inventory

    SciTech Connect

    Fischer, Marc; Jeong, Seongeun

    2016-03-01

    As a regulatory agency, evaluating and improving estimates of methane (CH4) emissions from the San Francisco Bay Area is an area of interest to the Bay Area Air Quality Management District (BAAQMD). Currently, regional, state, and federal agencies generally estimate methane emissions using bottom-up inventory methods that rely on a combination of activity data, emission factors, biogeochemical models and other information. Recent atmospheric top-down measurement estimates of methane emissions for the US as a whole (e.g., Miller et al., 2013) and in California (e.g., Jeong et al., 2013; Peischl et al., 2013) have shown inventories underestimate total methane emissions by ~ 50% in many areas of California, including the SF Bay Area (Fairley and Fischer, 2015). The goal of this research is to provide information to help improve methane emission estimates for the San Francisco Bay Area. The research effort builds upon our previous work that produced methane emission maps for each of the major source sectors as part of the California Greenhouse Gas Emissions Measurement (CALGEM) project (http://calgem.lbl.gov/prior_emission.html; Jeong et al., 2012; Jeong et al., 2013; Jeong et al., 2014). Working with BAAQMD, we evaluate the existing inventory in light of recently published literature and revise the CALGEM CH4 emission maps to provide better specificity for BAAQMD. We also suggest further research that will improve emission estimates. To accomplish the goals, we reviewed the current BAAQMD inventory, and compared its method with those from the state inventory from the California Air Resources Board (CARB), the CALGEM inventory, and recent published literature. We also updated activity data (e.g., livestock statistics) to reflect recent changes and to better represent spatial information. Then, we produced spatially explicit CH4 emission estimates on the 1-km modeling grid used by BAAQMD. We present the detailed activity data, methods and derived emission maps by sector

  20. [Plasma fractionation in the world: current status].

    PubMed

    Burnouf, T

    2007-05-01

    From 22 to 25 million liters of plasma are fractionated yearly in about 70 fractionation plants, either private or government-owned, mainly located in industrialized countries, and with a capacity ranging from 50000 to three million liters. In an increasingly global environment, the plasma industry has recently gone through a major consolidation phase that has seen mergers and acquisitions, and has led to the closure of a number of small plants in Europe. Currently, some fifteen countries are involved into contract plasma fractionation programs to ensure a supply of plasma-derived medicinal products. The majority of the plasma for fractionation is obtained by automated plasmapheresis, the remaining (recovered plasma) being prepared from whole blood as a by-product of red cell production. Plasma for fractionation should be produced, and controlled following well established procedures to meet the strict quality requirements set by regulatory authorities and fractionators. The plasma fractionation technology still relies heavily on the cold ethanol fractionation process, but has been improved by the introduction of modern chromatographic purification methods, and efficient viral inactivation and removal treatments, ensuring quality and safety to a large portfolio of fractionated plasma products. The safety of these products with regards to the risk of transmission of variant Creutzfeldt-Jakob disease seems to be provided, based on current scientific data, by extensive removal of the infectious agent during certain fractionation steps. The leading plasma product is now the intravenous immunoglobulin G, which has replaced factor VIII and albumin in this role. The supply of plasma products (most specifically coagulation products and immunoglobulin) at an affordable price and in sufficient quantity remains an issue; the problem is particularly acute in developing countries, as the switch to recombinant factor VIII in rich countries has not solved the supply issue and has

  1. Turning the tide: Saving the Chesapeake Bay

    SciTech Connect

    Horton, T.; Eichbaum, W.

    1991-07-01

    The Chesapeake Bay is one of the most productive and important ecosystems on earth, and as such is a model for other estuaries facing the demands of commerce, tourism, transportation, recreation, and other uses. This book presents a comprehensive look at two decades of efforts to save the bay, outlining which methods have worked and which have not.

  2. 33 CFR 117.735 - Newark Bay.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Newark Bay. 117.735 Section 117.735 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements New Jersey § 117.735 Newark Bay. The following...

  3. 33 CFR 117.735 - Newark Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Newark Bay. 117.735 Section 117.735 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements New Jersey § 117.735 Newark Bay. The following...

  4. 33 CFR 117.735 - Newark Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Newark Bay. 117.735 Section 117.735 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements New Jersey § 117.735 Newark Bay. The following...

  5. 33 CFR 117.735 - Newark Bay.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Newark Bay. 117.735 Section 117.735 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements New Jersey § 117.735 Newark Bay. The following...

  6. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sturgeon Bay. 117.1101 Section 117.1101 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The draw of...

  7. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  8. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  9. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  10. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  11. 33 CFR 117.269 - Biscayne Bay.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Biscayne Bay. 117.269 Section 117.269 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Florida § 117.269 Biscayne Bay. The Venetian Causeway...

  12. JUVENILE BAY SCALLOP (ARGOPECTEN IRRADIANS) HABITAT PREFERENCES

    EPA Science Inventory

    Habitat quality and quantity are known to be important for maintaining populations of bay scallops (Argopecten irradians), but data linking habitat attributes to bay scallop populations are lacking. This information is essential to understand the role of habitat alteration in th...

  13. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sturgeon Bay. 117.1101 Section 117.1101 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1101 Sturgeon Bay. (a) The draw of the Michigan Street Bridge, mile 4.3 at Sturgeon...

  14. 33 CFR 117.853 - Sandusky Bay.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sandusky Bay. 117.853 Section 117.853 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Ohio § 117.853 Sandusky Bay. The draw of the Norfolk...

  15. 33 CFR 117.853 - Sandusky Bay.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sandusky Bay. 117.853 Section 117.853 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Ohio § 117.853 Sandusky Bay. The draw of the Norfolk...

  16. Bristol Bay Assessment - Final Report (2014)

    EPA Pesticide Factsheets

    This is the final Bristol Bay assessment developed and peer reviewed by the Office of Research and Development in EPA. The purpose of this assessment is to provide a characterization of the biological and mineral resources of the Bristol Bay watershed.

  17. Bay Area Fatherhood Initiatives: Portraits and Possibilities.

    ERIC Educational Resources Information Center

    Gadsden, Vivian L.; Rethemeyer, R. Karl

    In the past decade, the nature of fathers' involvement with their children and families has become an important topic, with government agencies and nonprofit groups developing programs to help men manage the challenges of fatherhood. This report presents the first set of findings from the Bay Area Fathering Indicators Data System (BAyFIDS)…

  18. SF Bay Delta TMDL Progress Assessment

    EPA Pesticide Factsheets

    EPA assessed the progress 14 TMDLs in the SF Bay Delta Estuary (SF Bay Delta) to determine if the actions called for in the TMDL were being accomplished and water quality was improving. Status and water quality reports can be found here.

  19. Study on the Calculation Models of Bus Delay at Bays Using Queueing Theory and Markov Chain

    PubMed Central

    Sun, Li; Sun, Shao-wei; Wang, Dian-hai

    2015-01-01

    Traffic congestion at bus bays has decreased the service efficiency of public transit seriously in China, so it is crucial to systematically study its theory and methods. However, the existing studies lack theoretical model on computing efficiency. Therefore, the calculation models of bus delay at bays are studied. Firstly, the process that buses are delayed at bays is analyzed, and it was found that the delay can be divided into entering delay and exiting delay. Secondly, the queueing models of bus bays are formed, and the equilibrium distribution functions are proposed by applying the embedded Markov chain to the traditional model of queuing theory in the steady state; then the calculation models of entering delay are derived at bays. Thirdly, the exiting delay is studied by using the queueing theory and the gap acceptance theory. Finally, the proposed models are validated using field-measured data, and then the influencing factors are discussed. With these models the delay is easily assessed knowing the characteristics of the dwell time distribution and traffic volume at the curb lane in different locations and different periods. It can provide basis for the efficiency evaluation of bus bays. PMID:25759720

  20. Biodiversity inventories and conservation of the marine fishes of Bootless Bay, Papua New Guinea

    PubMed Central

    2012-01-01

    Background The effective management and conservation of biodiversity is predicated on clearly defined conservation targets. Species number is frequently used as a metric for conservation prioritization and monitoring changes in ecosystem health. We conducted a series of synoptic surveys focusing on the fishes of the Bootless Bay region of Papua New Guinea to generate a checklist of fishes of the region. Bootless Bay lies directly south of Port Moresby, the capital of Papua New Guinea, and experiences the highest human population density of any marine area in the country. Our checklist will set a baseline against which future environmental changes can be tracked. Results We generated a checklist of 488 fish species in 72 families found in Bootless Bay during a two-week sampling effort. Using incident-based methods of species estimation, we extrapolate there to be approximately 940 fish species in Bootless Bay, one of the lowest reported numbers in Papua New Guinea. Conclusions Our data suggest that the Bootless Bay ecosystem of Papua New Guinea, while diverse in absolute terms, has lower fish biodiversity compared to other shallow marine areas within the country. These differences in faunal diversity are most likely a combination of unequal sampling effort as well as biophysical factors within Bootless Bay compounded by historical and/or contemporary anthropogenic disturbances. PMID:22849436

  1. Spatial and temporal trends of contaminants in eggs of wading birds from San Francisco Bay, California

    USGS Publications Warehouse

    Hothem, R.L.; Roster, D.L.; King, K.A.; Keldsen, T.J.; Marois, Katherine C.; Wainwright, S.E.

    1995-01-01

    Between 1989 and 1991, reproduction by black-crowned night-herons (Nycticorax nycticorax) and snowy egrets (Egretta thula) was studied at sites in San Francisco Bay. Eggs were collected from these and other bay sites and from South Wilbur Flood Area, a reference site in California's San Joaquin Valley. Eggs were analyzed for inorganic trace elements, organochlorine pesticides, and polychlorinated biphenyls (PCBs). Results were compared among sites and years and with results of previous studies. There was some evidence of impaired reproduction, but concentrations of contaminants were generally lower than threshold levels for such effects. Egg hatchability was generally good, with predation being the factor that most limited reproductive success. Mean PCB concentrations were generally higher in eggs from the south end of San Francisco Bay than from the north, but the only temporal change, an increase, was observed at Alcatraz Island. There were spatial differences for p,p'-DDE in night-heron eggs in 1990, but the highest mean concentration of DDE was in night-heron eggs from South Wilbur in 1991. Temporal declines in maximum concentrations of DDE in eggs were observed in the bay, but means did not change significantly over time, At Bair Island in the southern end of the bay, mean concentrations of mercury decreased while selenium increased in night-heron eggs over time, but there were no clear bay-wide spatial or temporal trends for either element.

  2. Study on the calculation models of bus delay at bays using queueing theory and Markov chain.

    PubMed

    Sun, Feng; Sun, Li; Sun, Shao-Wei; Wang, Dian-Hai

    2015-01-01

    Traffic congestion at bus bays has decreased the service efficiency of public transit seriously in China, so it is crucial to systematically study its theory and methods. However, the existing studies lack theoretical model on computing efficiency. Therefore, the calculation models of bus delay at bays are studied. Firstly, the process that buses are delayed at bays is analyzed, and it was found that the delay can be divided into entering delay and exiting delay. Secondly, the queueing models of bus bays are formed, and the equilibrium distribution functions are proposed by applying the embedded Markov chain to the traditional model of queuing theory in the steady state; then the calculation models of entering delay are derived at bays. Thirdly, the exiting delay is studied by using the queueing theory and the gap acceptance theory. Finally, the proposed models are validated using field-measured data, and then the influencing factors are discussed. With these models the delay is easily assessed knowing the characteristics of the dwell time distribution and traffic volume at the curb lane in different locations and different periods. It can provide basis for the efficiency evaluation of bus bays.

  3. Spatial and temporal trends of contaminants in eggs of wading birds from San Francisco Bay, California

    SciTech Connect

    Hothem, R.L.; Marois, K.C.; Wainwright, S.E.; Roster, D.L.; King, K.A.; Keldsen, T.J.

    1995-08-01

    Between 1989 and 1991, reproduction by black-crowned night-herons (Nycticorax nycticorax) and snowy egrets (Egretta thula) was studied at sites in San Francisco Bay. Eggs were collected from these and other bay sites and from South Wilbur Flood Area, a reference site in California`s San Joaquin Valley. Eggs were analyzed for inorganic trace elements, organochlorine pesticides, and polychlorinated biphenyls (PCBs). Results were compared among sites and years and with results of previous studies. There was some evidence of impaired reproduction, but concentrations of contaminants were generally lower than threshold levels for such effects. Egg hatchability was generally good, with predation being the factor that most limited reproductive success. Mean PCB concentrations were generally higher in eggs from the south end of San Francisco Bay than from the north, but the only temporal change, an increase, was observed at Alcatraz Island. There were spatial differences for p,p{prime}-DDE in night-heron eggs in 1990, but the highest mean concentration of DDE was in night-heron eggs from South Wilbur in 1991. Temporal declines in maximum concentrations of DDE in eggs were observed in the bay, but means did not change significantly over time. At Bair Island in the southern end of the bay, mean concentrations of mercury decreased while selenium increased in night-heron eggs over time, but there were no clear bay-wide spatial or temporal trends for either element.

  4. Radioisotopic data of sediment collected in Mobile and Bon Secour Bays, Alabama

    USGS Publications Warehouse

    Marot, Marci E.; Smith, Christopher G.

    2012-01-01

    The focus of this study was to determine the extent of natural and (or) anthropogenic impacts on the sedimentary records of Mobile and Bon Secour Bays, Alabama during the last 150 years. These bays are unique in that anthropogenic activities are generally widespread and span both the eastern and western shorelines. However, there is a clear distinction in the types of human development and infrastructure between the western and eastern shorelines. These activities and the differences in land-use and -change influence the overall supply and remobilization of sediment to and within the bay. These factors could subsequently threaten the health and integrity of these environments and their ability to mitigate against long-term processes associated with climate change. In an attempt to characterize long-term accretion rates within the Mobile Bay Estuarine System (MBES), seven box cores were collected and analyzed for excess lead-210 (210Pbxs, the difference between total and supported 210Pb) and cesium-137 (137Cs) activities. The MBES receives sediment and water from the Alabama and Tombigbee River watersheds, which converge into the Mobile-Tensaw River (MTR) system just prior to discharging into Mobile Bay. Riverine discharge from the MTR system to the bay is second only to the Mississippi River discharge to the Gulf of Mexico for the conterminous United States.

  5. S saturation history of Nain Plutonic Suite mafic intrusions: origin of the Voisey's Bay Ni-Cu-Co sulfide deposit, Labrador, Canada

    NASA Astrophysics Data System (ADS)

    Lightfoot, Peter C.; Keays, Reid R.; Evans-Lamswood, Dawn; Wheeler, Robert

    2012-01-01

    The Voisey's Bay deposit is hosted in a 1.34-Ga intrusion composed of troctolite, olivine gabbro, and ferrogabbro. The sulfide mineralization is associated with magmatic breccias that are enveloped by weakly mineralized olivine gabbros and troctolites, and also occurs as veins along structures in adjacent paragneiss. A dyke is connected to the base of the north wall of the Eastern Deeps Intrusion, and the entry point of this dyke into the chamber is the locus of the Eastern Deeps nickel sulfide deposit. A detailed exploration in the area between the Eastern Deeps and the Ovoid has shown that these intrusions and ore deposits are connected by a splayed dyke. The Eastern Deeps Deposit is surrounded by a halo of moderately to weakly mineralized variable-textured troctolite (VTT) that reaches a maximum thickness above the axis of the Eastern Deeps Deposit along the northern wall of the Eastern Deeps Intrusion. The massive sulfides and breccia sulfides are petrologically and chemically different when compared to the disseminated sulfides in the VTT, and there is a marked break in Ni tenor of sulfide between the two. Sulfides hosted in the dyke tend to have low metal tenors ([Ni]100 = 2.5-3.5%), sulfides in Eastern Deeps massive and breccia ores have intermediate Ni tenors ([Ni]100 = 3.5-4%), and disseminated sulfides in overlying rocks have high Ni tenors ([Ni]100 = 4-8%). Four principal processes control the compositions of the Voisey's Bay sulfides. Coarse-grained loop-textured ores consisting of pyrrhotite crystals separated by chalcopyrite and pentlandite exhibit a two orders of magnitude variation in the Pd/Ir ratio which is due to mineralogical variations where pentlandite is enriched in Pd and Ir is dispersed throughout the mineral assemblage. A decrease in Ir and Rh from the margin of the Ovoid toward cubanite-rich parts at the central part of the Ovoid is consistent with fractionation of the sulfide from the margins toward the center of the Ovoid. The Ovoid

  6. Roles of regional hydrodynamic and trophic contamination in cadmium bioaccumulation by Pacific oysters in the Marennes-Oléron Bay (France).

    PubMed

    Strady, Emilie; Blanc, Gérard; Baudrimont, Magalie; Schäfer, Jörg; Robert, Serge; Lafon, Virginie

    2011-06-01

    The Marennes-Oléron Bay, hosting the largest oyster production in France, is influenced by the historic polymetallic pollution of the Gironde Estuary. Despite management efforts and decreasing emissions in the Gironde watershed, cadmium levels in oysters from the bay are close to the consumption limit (5 μg g(-1) dw, EC). From mid April to mid July 2009, we investigated the role of tidal resuspension and regional hydrodynamics on Cd speciation (seawater, SPM, phytoplankton, sediment, microphytobenthos) and bioaccumulation in 18 month-old oysters (gills, digestive glands, rests of tissues) reared under natural conditions (i) at ∼60 cm above the sediment and (ii) on the sediment surface. Dissolved and particulate Cd concentrations in surface and bottom waters were similar and constant over tidal cycle suggesting the absence of Cd release during sediment resuspension. Temporal dissolved and particulate Cd concentrations were closely related to Gironde Estuary water discharges, showing increasing concentrations during flood situations and decreasing concentrations afterwards. Cd depletion in the water column was associated with increasing Cd in the [20-100 μm] plankton fraction, suggesting Cd bioaccumulation. After 3 months, enrichment factors of Cd in tissues of oysters exposed in the water column and directly on the sediment were respectively 3.0 and 2.2 in gills, 4.7 and 3.2 in digestive glands and 4.9 and 3.4 in remaining tissues. Increasing Cd bioaccumulation in gills, digestive glands and remaining tissues can be related to elevated dissolved Cd in the bay, suggesting gill contamination via the direct pathway and subsequent internal redistribution of Cd to other organs and tissues. Elevated Cd contents in oysters reared on tables could be attributed to different trophic Cd transfer (phytoplankton versus microphytobenthos) or to different oyster metabolisms between the rearing conditions as suggested by metallothionein concentrations.

  7. Young Children's Notations for Fractions

    ERIC Educational Resources Information Center

    Brizuela, Barbara M.

    2006-01-01

    This paper focuses on the kinds of notations young children make for fractional numbers. The extant literature in the area of fractional numbers acknowledges children's difficulties in conceptualizing fractional numbers. Some of the research suggests possibly delaying an introduction to conventional notations for algorithms and fractions until…

  8. Creating, Naming, and Justifying Fractions

    ERIC Educational Resources Information Center

    Siebert, Daniel; Gaskin, Nicole

    2006-01-01

    For students to develop meaningful conceptions of fractions and fraction operations, they need to think of fractions in terms other than as just whole-number combinations. In this article, we suggest two powerful images for thinking about fractions that move beyond whole-number reasoning. (Contains 5 figures.)

  9. Late Quaternary history of southern Chesapeake Bay

    SciTech Connect

    Colman, S.M.; Hobbs, C.H. III; Halka, J.P.

    1985-01-01

    More than 700 km of high-resolution, seismic-reflection profiles and sidescan-sonar images provide new information about the late Quaternary history of southern Chesapeake Bay. Sidescan-sonar images show that, excluding the nearshore zone, most of the bay bottom has a monotonously smooth surface, except that sand waves, ripples, and other bedforms occur in local areas affected by tidal currents. Seismic-reflection data show that the Quaternary stratigraphy of the southern part of the Bay is related primarily to the last cycle of sea-level change. The Quaternary section overlies an erosion surface cut deeply into gently seaward-dipping marine beds of Neogene age. Fluvial paleochannels, related to the last major low sea-level stand, are characterized by as much as 55 m of incision and by thin, irregular, terrace and channel-bottom deposits. Marine and estuarine deposits related to the Holocene transgression partially or fully bury the fluvial valleys and overlie the interfluves. A prominent feature of the Bay-mouth area is a wedge of sediment that has prograded into the Bay from the inner shelf. The common assumption--that the Chesapeake Bay is the drowned valley of the Pleistocene Susquehanna River--is only partially valid for the southern part of the Bay. The Bay mouth area, in general, is relatively young. The axial channel of the Bay is a modern tidal channel that is actively eroding Tertiary deposits and migrating toward the south and west; it is unrelated to older fluvial channels. Also, the positions of the modern axial channel and the last two fluvial paleochannels indicate long-term southward migration of the Bay mouth.

  10. Arbitrage with fractional Gaussian processes

    NASA Astrophysics Data System (ADS)

    Zhang, Xili; Xiao, Weilin

    2017-04-01

    While the arbitrage opportunity in the Black-Scholes model driven by fractional Brownian motion has a long history, the arbitrage strategy in the Black-Scholes model driven by general fractional Gaussian processes is in its infancy. The development of stochastic calculus with respect to fractional Gaussian processes allowed us to study such models. In this paper, following the idea of Shiryaev (1998), an arbitrage strategy is constructed for the Black-Scholes model driven by fractional Gaussian processes, when the stochastic integral is interpreted in the Riemann-Stieltjes sense. Arbitrage opportunities in some fractional Gaussian processes, including fractional Brownian motion, sub-fractional Brownian motion, bi-fractional Brownian motion, weighted-fractional Brownian motion and tempered fractional Brownian motion, are also investigated.

  11. Contemporary radiooncological management of bone metastases from breast cancer: factors associated with prescription of different fractionation regimens (short or long course) in a rural part of North Norway with long travel distance

    PubMed Central

    Nieder, Carsten; Dalhaug, Astrid; Haukland, Ellinor; Mannsåker, Bård; Pawinski, Adam

    2017-01-01

    ABSTRACT The aim of this study was to reduce barriers that prevent implementation of evidence-based recommendations about single-fraction palliative radiotherapy (PRT) and to demonstrate that single-fraction PRT yields similar outcomes as long-course treatment (≥10 fractions) in patients with bone metastases from breast cancer. This retrospective study (2007–2014) included 118 Norwegian female patients. All patients received guideline-conform systemic therapy including bone-targeting agents. Median survival was 12.7 months. Long-course PRT was prescribed in 60% of patients, while 21% had PRT with a single fraction of 8 Gy to at least one target. Reirradiation rate was not significantly higher after 8 Gy (9%, compared to 5% after long-course PRT and 6% after 4 Gy x5). Patients with favorable baseline characteristics such as younger age and good performance status (PS) were significantly more likely to receive long-course PRT. Biological subtype and comorbidity did not correlate with fractionation. Prognosis was influenced by biological subtype, extra-skeletal disease extent, severe anemia and abnormal CRP. The limited need for reirradiation after single fraction PRT might encourage physicians to prescribe this convenient regimen, which would improve resource utilization. Even patients with PS3 had a median survival of 3 months, which indicates that they could experience worthwhile clinical benefit.

  12. Water resources planning for rivers draining into Mobile Bay. Part 2: Non-conservative species transport models

    NASA Technical Reports Server (NTRS)

    April, G. C.; Liu, H. A.

    1975-01-01

    Total coliform group bacteria were selected to expand the mathematical modeling capabilities of the hydrodynamic and salinity models to understand their relationship to commercial fishing ventures within bay waters and to gain a clear insight into the effect that rivers draining into the bay have on water quality conditions. Parametric observations revealed that temperature factors and river flow rate have a pronounced effect on the concentration profiles, while wind conditions showed only slight effects. An examination of coliform group loading concentrations at constant river flow rates and temperature shows these loading changes have an appreciable influence on total coliform distribution within Mobile Bay.

  13. Testing fractional action cosmology

    NASA Astrophysics Data System (ADS)

    Shchigolev, V. K.

    2016-08-01

    The present work deals with a combined test of the so-called Fractional Action Cosmology (FAC) on the example of a specific model obtained by the author earlier. In this model, the effective cosmological term is proportional to the Hubble parameter squared through the so-called kinematic induction. The reason of studying this cosmological model could be explained by its ability to describe two periods of accelerated expansion, that is in agreement with the recent observations and the cosmological inflation paradigm. First of all, we put our model through the theoretical tests, which gives a general conception of the influence of the model parameters on its behavior. Then, we obtain some restrictions on the principal parameters of the model, including the fractional index, by means of the observational data. Finally, the cosmography parameters and the observational data compared to the theoretical predictions are presented both analytically and graphically.

  14. Fractional lattice charge transport

    PubMed Central

    Flach, Sergej; Khomeriki, Ramaz

    2017-01-01

    We consider the dynamics of noninteracting quantum particles on a square lattice in the presence of a magnetic flux α and a dc electric field E oriented along the lattice diagonal. In general, the adiabatic dynamics will be characterized by Bloch oscillations in the electrical field direction and dispersive ballistic transport in the perpendicular direction. For rational values of α and a corresponding discrete set of values of E(α) vanishing gaps in the spectrum induce a fractionalization of the charge in the perpendicular direction - while left movers are still performing dispersive ballistic transport, the complementary fraction of right movers is propagating in a dispersionless relativistic manner in the opposite direction. Generalizations and the possible probing of the effect with atomic Bose-Einstein condensates and photonic networks are discussed. Zak phase of respective band associated with gap closing regime has been computed and it is found converging to π/2 value. PMID:28102302

  15. Floquet Fractional Chern Insulators

    NASA Astrophysics Data System (ADS)

    Grushin, Adolfo G.; Gómez-León, Álvaro; Neupert, Titus

    2014-04-01

    We show theoretically that periodically driven systems with short range Hubbard interactions offer a feasible platform to experimentally realize fractional Chern insulator states. We exemplify the procedure for both the driven honeycomb and the square lattice, where we derive the effective steady state band structure of the driven system by using the Floquet theory and subsequently study the interacting system with exact numerical diagonalization. The fractional Chern insulator state equivalent to the 1/3 Laughlin state appears at 7/12 total filling (1/6 filling of the upper band). The state also features spontaneous ferromagnetism and is thus an example of the spontaneous breaking of a continuous symmetry along with a topological phase transition. We discuss light-driven graphene and shaken optical lattices as possible experimental systems that can realize such a state.

  16. Fractional Trajectories: Decorrelation Versus Friction

    DTIC Science & Technology

    2013-07-27

    from the integration of fractional differential equations in time. In Section 2 we provide a general demonstration of the new perspective on fractional ...section we demonstrate the equivalence between a fractional trajectory that is the solution of a Caputo fractional differential equation , and the... fractional differential equation dα dtα V(t) = OV(t), (1) where 0 < α < 1 and O is an operator, either linear or nonlinear, acting on the vector V(t

  17. Temporal variations in the benthic communities at four intertidal sites in San Francisco Bay, California, 1983-85

    USGS Publications Warehouse

    Hopkins, D.R.

    1987-01-01

    Benthic core samples were collected monthly from January 1983 through January 1985 at four intertidal sites in San Francisco Bay, California, two in the northern part of the bay (North Bay) and two in the southern part of the bay (South Bay). Considerable variation was observed in numbers of species and individuals at the four sites, and abundances within species varied widely. Temporal changes in species abundances appeared to be related to freshwater inflow patterns and resultant salinity variations in the estuary. The 1982-83 winter season was extremely wet, with heavy freshwater inflow to the bay from January through March, whereas the 1983-84 winter was closer to a normal pattern, with most rainfall occurring from November through January. Species were grouped into four categories depending on their patterns of abundance during the 2-yr period. Species that showed an abundance peak in the North Bay in 1983 only were Corophium sp.B and a Chironomidae larva, apparently responding to the extended period of lowered salinity throughout spring and early summer. Species with an abundance peak only in 1984 included Corophium Acherusicum, Eteone californica, Nereis succinea, and Grandidierella japonica, typical estuarine species that might have been suppressed during the extended freshwater inflows in 1983. Species with peaks in both years were Gemma gemma and Ampelisca abdita in the South Bay; both showed strong seasonal variations. A number of species in both North and South Bays, including dominant members of the intertidal community such as Macoma balthical and Streblospio benedicti, did not show any consistent seasonal or year-to-year trends. Results of this study suggest that the intensity and timing of freshwater inflow to San Francisco Bay, particularly higher-than-normal inflow during late spring and early summer, may be an important factor in determining the composition of the intertidal benthic communities. (Author 's abstract)

  18. Oxygen isotope fractionation in divalent metal carbonates

    USGS Publications Warehouse

    O'Neil, J.R.; Clayton, R.N.; Mayeda, T.K.

    1969-01-01

    Equilibrium fractionation factors for the distribution of 18O between alkaline-earth carbonates and water have been measured over the temperature range 0-500??C. The fractionation factors ?? can be represented by the equations CaCO3-H2O, 1000 ln??=2.78(106 T-2)-3.39, SrCO3-H 2O, 1000 ln??=2.69(106 T-2)-3.74, BaCO3-H2O, 1000 ln??=2.57(106 T -2)-4.73. Measurements on MnCO3, CdCO3, and PbCO3 were made at isolated temperatures. A statistical-mechanical calculation of the isotopic partition function ratios gives reasonably good agreement with experiment. Both cationic size and mass are important in isotopic fractionation, the former predominantly in its effect on the internal vibrations of the anion, the latter in its effect on the lattice vibrations.

  19. Fractional Galilean symmetries

    NASA Astrophysics Data System (ADS)

    Hosseiny, Ali; Rouhani, Shahin

    2016-09-01

    We generalize the differential representation of the operators of the Galilean algebras to include fractional derivatives. As a result a whole new class of scale invariant Galilean algebras are obtained. The first member of this class has dynamical index z = 2 similar to the Schrödinger algebra. The second member of the class has dynamical index z = 3 / 2, which happens to be the dynamical index Kardar-Parisi-Zhang equation.

  20. New Dry Fractionation Methods

    NASA Technical Reports Server (NTRS)

    McKay, David S.; Cooper, Bonnie L.

    2010-01-01

    This slide presentation describes new fractionation methods that are used to create dust that is respirable for testing the effects of inhalation of lunar dust in preparation for future manned lunar exploration. Because lunar dust is a very limited commodity, a method that does not result in loss of the material had to be developed. The dust separation system that is described incorporates some traditional methods, while preventing the dust from being contaminated or changed in reactivity properties while also limiting losses.

  1. Model Fractional Chern Insulators

    NASA Astrophysics Data System (ADS)

    Behrmann, Jörg; Liu, Zhao; Bergholtz, Emil J.

    2016-05-01

    We devise local lattice models whose ground states are model fractional Chern insulators—Abelian and non-Abelian topologically ordered states characterized by exact ground state degeneracies at any finite size and infinite entanglement gaps. Most saliently, we construct exact parent Hamiltonians for two distinct families of bosonic lattice generalizations of the Zk parafermion quantum Hall states: (i) color-entangled fractional Chern insulators at band filling fractions ν =k /(C +1 ) and (ii) nematic states at ν =k /2 , where C is the Chern number of the lowest band. In spite of a fluctuating Berry curvature, our construction is partially frustration free: the ground states reside entirely within the lowest band and exactly minimize a local (k +1 ) body repulsion term by term. In addition to providing the first known models hosting intriguing states such as higher Chern number generalizations of the Fibonacci anyon quantum Hall states, the remarkable stability and finite-size properties make our models particularly well suited for the study of novel phenomena involving, e.g., twist defects and proximity induced superconductivity, as well as being a guide for designing experiments.

  2. Structure, age and origin of the bay-mouth shoal deposits, Chesapeake Bay, Virginia

    USGS Publications Warehouse

    Colman, Steven M.; Berquist, C.R.; Hobbs, C. H.

    1988-01-01

    The mouth of Chesapeake Bay contains a distinctive shoal complex and related deposits that result from the complex interaction of three different processes: (1) progradation of a barrier spit at the southern end of the Delmarva Peninsula, (2) strong, reversing tidal currents that transport and rework sediment brought to the bay mouth from the north, and (3) landward (bayward) net non-tidal circulation and sediment transport. Together, these processes play a major role in changing the configuration of the estuary and filling it with sediment. The deposits at the mouth of the bay hold keys both to the evolution of the bay during the Holocene transgression and to the history of previous generations of the bay. The deposit associated with the shoals at the mouth of the bay, the bay-mouth sand, is a distinct stratigraphic unit composed mostly of uniform, gray, fine sand. The position and internal structure of the unit shows that it is related to near-present sea level, and thus is less than a few thousand years old. The processes affecting the upper surface of the deposit and the patterns of erosion and deposition at this surface are complex, but the geometry and structure of the deposit indicate that it is a coherent unit that is prograding bayward and tending to fill the estuary. The source of the bay-mouth sand is primarily outside the bay in the nearshore zone of the Delmarva Peninsula and on the inner continental shelf. The internal structure of the deposit, its surface morphology, its heavy-mineral composition, bottom-current studies, comparative bathymetry, and sediment budgets all suggest that sand is brought to the bay mouth by southerly longshore drift along the Delmarva Peninsula and then swept into the bay. In addition to building the southward- and bayward-prograding bay-mouth sand, these processes result in sand deposition tens of kilometers into the bay. ?? 1988.

  3. Occurance and survival of Vibrio alginolyticus in Tamouda Bay (Morocco).

    PubMed

    Sabir, M; Cohen, N; Boukhanjer, A; Ennaji, M M

    2011-10-15

    The objectives of this study were to investigate the spatial and seasonal fluctuations of Vibrio alginolyticus in marine environment of the Tamouda Bay on the Mediterranean coast of Morocco and to determine the dominant factors of the environment that govern these fluctuations. The samples (sea water, plankton, shellfish and sediment) were collected fortnightly for two years from three study sites on the coast Tamouda Bay in northern Morocco. The charge of Vibrio alginolyticus is determined by MPN method. The physicochemical parameters including temperature of sea water, pH, salinity, turbidity and chlorophyll a concentration were determined. Analysis of variance of specific variables and several principal component analyses showed that the temperature of seawater is the major determinant of seasonal distribution of Vibrio alginolyticus. The results showed a positive linear correlation between Vibrio alginolyticus and the water temperature, pH, turbidity and chlorophyll a. Similarly, there are seasonal variations and spatial of Vibrio alginolyticus in marine environment of the Tamouda bay and the highest concentrations were recorded in both years of study during the warm season whereas it was minimal during the cold season. Linear positive correlation was recorded between Vibrio alginolyticus populations in all ecological types of samples studied.

  4. Contrasting behaviour of arsenic and mercury in Liverpool Bay sediments

    NASA Astrophysics Data System (ADS)

    Camacho-Ibar, V. F.; Wrench, J. J.; Head, P. C.

    1992-01-01

    Arsenic, mercury, aluminium, iron and manganese concentrations were determined in surface sediments from the Liverpool Bay area. Hg/Al ratios suggest an overall two-fold enrichment of Hg compared to average shale values resulting from natural lithogenic inputs. The River Mersey is the main source of Hg; however, sewage sludge and dredged spoil disposal activities produce areas containing up to six times the projected natural levels. Arsenic is enriched by a factor of 2·3 compared to average shale. As/Al ratios suggest an enrichment of arsenic in the disposal area; however, arsenic concentrations in sewage sludge show that disposal activities are not responsible for the overall enrichment in the bay. Very high arsenic concentrations have been reported for sediments in freshwater and estuarine sediments from North Wales. As/Fe values in this study increase towards the Welsh coast indicating that the overall arsenic enrichment in Liverpool Bay sediments may derive from natural inputs from the mineralized areas of North Wales.

  5. Microbial diversity in restored wetlands of San Francisco Bay

    SciTech Connect

    Theroux, Susanna; Hartman, Wyatt; He, Shaomei; Tringe, Susannah

    2013-12-09

    Wetland ecosystems may serve as either a source or a sink for atmospheric carbon and greenhouse gases. This delicate carbon balance is influenced by the activity of belowground microbial communities that return carbon dioxide and methane to the atmosphere. Wetland restoration efforts in the San Francisco Bay-Delta region may help to reverse land subsidence and possibly increase carbon storage in soils. However, the effects of wetland restoration on microbial communities, which mediate soil metabolic activity and carbon cycling, are poorly studied. In an effort to better understand the underlying factors which shape the balance of carbon flux in wetland soils, we targeted the microbial communities in a suite of restored and historic wetlands in the San Francisco Bay-Delta region. Using DNA and RNA sequencing, coupled with greenhouse gas monitoring, we profiled the diversity and metabolic potential of the wetland soil microbial communities along biogeochemical and wetland age gradients. Our results show relationships among geochemical gradients, availability of electron acceptors, and microbial community composition. Our study provides the first genomic glimpse into microbial populations in natural and restored wetlands of the San Francisco Bay-Delta region and provides a valuable benchmark for future studies.

  6. Iron Isotope Fractionation in the Lower Mantle

    NASA Astrophysics Data System (ADS)

    Yang, H.; Lin, J. F.; Dauphas, N.

    2015-12-01

    Knowledge of iron isotopes in the deep Earth is of great importance, for it provides clues for determining the history of planetary differentiation and core formation, as well as the origin of the Earth. However, iron isotope composition of the Earth's interior is rarely known due to lack of samples. Previous theoretical and experimental results are insufficient because they presume the spin state of iron or they are based on relatively low quality experimental data. Here we will use a newly developed technique --NRIXS(Nuclear Resonant Inelastic X-ray Scattering)-- to measure the force constant of lower mantle mineral candidates ferropericlase and pervoskite at relevant pressure. A reliable iron isotope fractionation factor will then be derived using SciPhon, which is a software designed specifically for the isotope fractionation factor derivation from NRIXS data. We report new high pressure 57Fe NRIXS spectra collected at beamline 3 ID-B of the Advanced Photon Source, with the aim to understand the pressure effect on iron isotope fractionation. The experiments were conducted using a 3-fold Diamond Anvil Cell and a >95% 57Fe enriched sample fp25((Fe0.25Mg0.75)O). NRIXS spectra were collected by tuning the x-ray energy range within ± 200meV around the 57Fe resonant energy of 14.4125keV. We will present the force constants and derived iron isotope fractionation factors of ferropericlase. It is expected that pressure will have an effect on the iron isotope fractionation factor and should be taken into account when modeling isotope fractionation of planetary scale and when using iron isotope systems to constrain the planetary differentiation. We will also use first-principle studies and geochemical observations to study the Fe,O,Si isotope system in the deep Earth. Our ultimate goal is to build a self-consistent geophysical and geochemical model that can be used in deciphering the mystery of Earth's history.

  7. 10. VIEW TO NORTHEAST FROM WITHIN SOUTHWEST BAY, LOOKING THROUGH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    10. VIEW TO NORTHEAST FROM WITHIN SOUTHWEST BAY, LOOKING THROUGH CENTER BAY AND INTO NORTHEAST BAY. NOTE TRAVELING BRIDGE CRANE OVERHEAD AND SWINGING BOOM CRANES ATTACHED TO COLUMNS ON RIGHT AND LEFT. NOTE ALSO THE DIFFERENCE IN TRUSSES SUPPORTING CRANEWAY TRACKS FOR SIDE BAYS AND CENTER BAY. TRUSSES SUPPORTING CRANEWAY TRACKS IN SIDE BAYS (CENTER FOREGROUND AND FAR BACKGROUND) ARE HOWE TRUSSES WITH WOOD DIAGONALS AND STEEL VERTICALS. TRUSSES SUPPORTING CRANEWAY TRACKS IN CENTER BAY (MID BACKGROUND) ARE PRATT TRUSSES WITH WOOD VERTICALS AND DIAGONALS. - Rosie the Riveter National Historical Park, Auxiliary Plate Shop, 912 Harbour Way, Richmond, Contra Costa County, CA

  8. Stable-isotope analysis of canvasback winter diet in upper Chesapeake Bay

    USGS Publications Warehouse

    Haramis, G.M.; Jorde, D.G.; Macko, S.A.; Walker, J.L.

    2001-01-01

    A major decline in submerged aquatic vegetation (SAV) in Chesapeake Bay has altered the diet of wintering Canvasbacks (Aythya valisineria) from historically plant to a combination of benthic animal foods, especially the ubiquitous Baltic clam (Macoma balthica), supplemented with anthropogenic corn (Zea mays). Because the isotopic signature of corn is readily discriminated from bay benthos, but not SAV, we used stable-isotope methodology to investigate the corn-SAV component of the winter diet of Canvasbacks. Feeding trials with penned Canvasbacks were conducted to establish turnover rates and fractionation end-point loci of *13C and *15N signatures of whole blood for individual ducks fed ad libitum diets of (1) Baltic clams, (2) Baltic clams and corn, and (3) tubers of wild celery (Vallisneria americana). Turnover time constants averaged 4.5 weeks, indicating that signatures of wild ducks would be representative of bay diets by late February. Isotopic signatures of wild Canvasbacks sampled in February fell on a continuum between end-point loci for the Baltic clam and the combination Baltic clam and corn diet. Although that finding verifies a clear dependence on corn-SAV for wintering Canvasbacks, it also reveals that not enough corn-SAV is available to establish ad libitum consumption for the 15,000+ Canvasbacks wintering in the upper bay. On the basis of mean *13C signature of bay Canvasbacks (n=59) and ingestion rates from feeding trials, we estimated that 258 kg corn per day would account for the observed *13C enrichment and supply 18% of daily energetic needs for 15,000 Canvasbacks. That level of corn availability is so realistic that we conclude that SAV is likely of little dietary importance to Canvasbacks in that portion of the bay.

  9. Paleoseismicity on the Dense Network of Holocene Submarine Faults in Beppu Bay, Southwest Japan

    NASA Astrophysics Data System (ADS)

    Shimazaki, K.; Matsuoka, H.; Okamura, M.; Chida, N.

    2003-12-01

    Beppu Bay, approximately 30 km by 15 km in size, contains a complex network of Holocene submarine faults whose total length amounts to 230km. They are normal dip-slip fault with left-lateral strike-slip component. The maximum vertical offset accumulated in the past 7,300 years exceeds 20 m. A detailed study on paleoseismicity on one of the faults shows a feature of the time-predictable recurrence, i.e., the larger the vertical offset, the longer the following inter-event time. Branching features can be often recognized near the end of fault and the consistency in branching direction of neighboring faults suggest repeated rupture propagation in the same direction. A detailed examination of high-resolution seismic profiling of branch indicates a repeat of branching and a slow transition of rupture from an old branch to a new one. The central Beppu-Bay fault running WNW to ESE in the center of the bay forms the northern boundary of the major graben structure of the bay. The Asamigawa fault in the west of the bay, running parallel to the central Beppu-Bay fault, has been considered as the southern boundary, but its eastern continuation was not clear. Recent seismic profiling carried out by Chida et al. (2003) showed an existence of Holocene normal fault beneath the city of Oita whose population is 440,000 and interpreted it as a part of the southern boundary. Our high-resolution shallow-water profiling survey revealed the submarine portion of the southern boundary fault, filling a gap between two subaerial faults. We continuously sample marine sediments down to a subbottom depth of 20m by piston coring and correlate specific features of sediment, 20 volcanic ash layers, a few features of magnetic susceptibility and coarse fraction together with C-14 ages of echinoids, pelecypods, and plant remains on the both sides of a targe fault to estimate the date and vertical offset of paleoearthquakes.

  10. Environmental setting of San Francisco Bay

    USGS Publications Warehouse

    Conomos, T.J.; Smith, R.E.; Gartner, J.W.

    1985-01-01

    San Francisco Bay, the largest bay on the California coast, is a broad, shallow, turbid estuary comprising two geographically and hydrologically distinct subestuaries: the northern reach lying between the connection to the Pacific Ocean at the Golden Gate and the confluence of the Sacramento-San Joaquin River system, and the southern reach (herein called South Bay) between the Golden Gate and the southern terminus of the bay. The northern reach is a partially mixed estuary dominated by seasonally varying river inflow, and the South Bay is a tidally oscillating lagoon-type estuary. Freshwater inflows, highest during winter, generate strong estuarine circulation and largely determine water residence times. They also bring large volumes of dissolved and particulate materials to the estuary. Tidal currents, generated by mixed semidiurnal and diurnal tides, mix the water column and, together with river inflow and basin geometry, determine circulation patterns. Winds, which are strongest during summer and during winter storms, exert stress on the bay's water surface, thereby creating large waves that resuspend sediment from the shallow bay bottom and, together with the tidal currents, contribute markedly to the transport of water masses throughout the shallow estuary. ?? 1985 Dr W. Junk Publishers.

  11. 33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters... REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a) The..., Naval Support Activity, Panama City Florida, and such agencies as he/she may designate....

  12. 78 FR 62293 - Safety Zone, Oyster Festival 30th Anniversary Fireworks Display, Oyster Bay; Oyster Bay, NY

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-10-15

    ... CFR Part 165 RIN 1625-AA00 Safety Zone, Oyster Festival 30th Anniversary Fireworks Display, Oyster Bay; Oyster Bay, NY AGENCY: Coast Guard, DHS. ACTION: Temporary final rule. SUMMARY: The Coast Guard is establishing a temporary safety zone on the navigable waters of Oyster Bay near Oyster Bay, NY for the...

  13. 33 CFR 165.T11-534 - Safety zone; Bay Bridge construction, San Francisco Bay, San Francisco, CA.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Safety zone; Bay Bridge construction, San Francisco Bay, San Francisco, CA. 165.T11-534 Section 165.T11-534 Navigation and Navigable... Eleventh Coast Guard District § 165.T11-534 Safety zone; Bay Bridge construction, San Francisco Bay,...

  14. 33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters CORPS OF ENGINEERS, DEPARTMENT OF THE ARMY, DEPARTMENT OF DEFENSE DANGER ZONE AND RESTRICTED AREA REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a)...

  15. 33 CFR 334.762 - Naval Support Activity Panama City; North Bay and West Bay; restricted areas.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... City; North Bay and West Bay; restricted areas. 334.762 Section 334.762 Navigation and Navigable Waters CORPS OF ENGINEERS, DEPARTMENT OF THE ARMY, DEPARTMENT OF DEFENSE DANGER ZONE AND RESTRICTED AREA REGULATIONS § 334.762 Naval Support Activity Panama City; North Bay and West Bay; restricted areas. (a)...

  16. 76 FR 37641 - Safety Zone; Independence Day Fireworks Celebration for the City of Half Moon Bay, Half Moon Bay, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-28

    ... the City of Half Moon Bay, Half Moon Bay, CA AGENCY: Coast Guard, DHS. ACTION: Temporary final rule. SUMMARY: The Coast Guard is establishing a temporary safety zone in the navigable waters of Half Moon Bay, off of Pillar Point Harbor beach, Half Moon Bay, CA in support of the Independence Day...

  17. 77 FR 38005 - Eighth Coast Guard District Annual Safety Zones; Biloxi Bay Fireworks; Biloxi Bay; Biloxi, MS

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-26

    ... SECURITY Coast Guard 33 CFR Part 165 Eighth Coast Guard District Annual Safety Zones; Biloxi Bay Fireworks; Biloxi Bay; Biloxi, MS AGENCY: Coast Guard, DHS. ACTION: Notice of enforcement of regulation. ] SUMMARY: The Coast Guard will enforce a Safety Zone for the Biloxi Bay Fireworks event in Biloxi Bay,...

  18. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 46 Shipping 1 2011-10-01 2011-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  19. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 46 Shipping 1 2010-10-01 2010-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  20. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 46 Shipping 1 2014-10-01 2014-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  1. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 46 Shipping 1 2013-10-01 2013-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  2. 46 CFR 7.20 - Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and...

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 46 Shipping 1 2012-10-01 2012-10-01 false Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block Island Sound and easterly entrance to Long Island Sound, NY. 7.20 Section 7.20... Atlantic Coast § 7.20 Nantucket Sound, Vineyard Sound, Buzzards Bay, Narragansett Bay, MA, Block...

  3. Comparative study of the aerobic, heterotrophic bacterial flora of Chesapeake Bay and Tokyo Bay.

    PubMed Central

    Austin, B; Garges, S; Conrad, B; Harding, E E; Colwell, R R; Simidu, U; Taga, N

    1979-01-01

    A comparative study of the bacterial flora of the water of Chesapeake Bay and Tokyo Bay was undertaken to assess similarities and differences between the autochthonous flora of the two geographical sites and to test the hypothesis that, given similarities in environmental parameters, similar bacterial populations will be found, despite extreme geographic distance between locations. A total of 195 aerobic, heterotrophic bacterial strains isolated from Chesapeake Bay and Tokyo Bay water were examined for 115 biochemical, cultural, morphological, nutritional, and physiological characters. The data were analyzed by the methods of numerical taxonomy. From sorted similarity matrices, 77% of the isolates could be grouped into 30 phena and presumptively identified as Acinetobacter-Moraxella, Caulobacter, coryneforms, Pseudomonas, and Vibrio spp. Vibrio and Acinetobacter species were found to be common in the estuarine waters of Chesapeake Bay, whereas Acinetobacter-Moraxella and Caulobacter predominated in Tokyo Bay waters, at the sites sampled in the study. PMID:453838

  4. A pollution history of Chesapeake Bay

    USGS Publications Warehouse

    Goldberg, E.D.; Hodge, V.; Koide, M.; Griffin, J.; Gamble, E.; Bricker, O.P.; Matisoff, G.; Holdren, G.R.; Braun, R.

    1978-01-01

    Present day anthropogenic fluxes of some heavy metals to central Chesapeake Bay appear to be intermediate to those of the southern California coastal region and those of Narragansett Bay. The natural fluxes, however, are in general higher. On the bases of Pb-210 and Pu-239 + 240 geochronologies and of the time changes in interstitial water compositions, there is a mixing of the upper 30 or so centimeters of the sediments in the mid-Chesapeake Bay area through bioturbation by burrowing mollusks and polychaetes. Coal, coke and charcoal levels reach one percent or more by dry weight in the deposits, primarily as a consequence of coal mining operations. ?? 1978.

  5. San Francisco and Bay Area, CA, USA

    NASA Technical Reports Server (NTRS)

    1973-01-01

    Although clouds obscure part of the city of San Francisco and the mouth of the Bay (37.5N, 122.0W), many cultural and natural features in the immediate vicinity are obvious. The Bay Bridge which was damaged in the 1989 earthquake, Candlestick Park, San Mateo and Dumbarton Bridges as well as the various colored settling ponds rimming the south end of the Bay, the San Andreas and Calaveras faults and many of the major highways can be seen. Color infrared photography is very useful for haze penetration and greater definition of the imagery as well as vegetation detection, depicted as shades of red.

  6. 33 CFR 165.1187 - Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. 165.1187 Section 165.1187... San Francisco-Oakland Bay Bridge, San Francisco Bay, California. (a) Location. All waters extending... Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, in San Francisco Bay, California....

  7. 33 CFR 165.1187 - Security Zones; Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay...

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Bridge and the San Francisco-Oakland Bay Bridge, San Francisco Bay, California. 165.1187 Section 165.1187... San Francisco-Oakland Bay Bridge, San Francisco Bay, California. (a) Location. All waters extending... Golden Gate Bridge and the San Francisco-Oakland Bay Bridge, in San Francisco Bay, California....

  8. [Ablative and fractional lasers].

    PubMed

    Beylot, C; Grognard, C; Michaud, T

    2009-10-01

    The use of pulsed or scanning Carbon Dioxide, and pulsed Erbium-YAG lasers allows the programmable and reproducible photocoagulation of thin layers of the epidermis and superficial dermis. Thermal damage depends on the type of laser and is greater with CO(2) lasers. The degree of neocollagenesis is proportional to the thermal damage and is better with CO(2) lasers. Their main indication is the correction of photoaged facial skin but they can also be used for corrective dermatology, e.g. for scars and genodermatosis. Results are highly satisfactory but the technique is invasive and the patient experiences a social hindrance of around two weeks. Fractionated techniques treat 25% of the defective skin area at each session in noncontiguous microzones; four sessions are therefore necessary to treat the entire cutaneous surface. The treatment is given under topical anesthesia and is much less invasive, particularly with nonablative fractional laser treatment in which photothermolysis does not penetrate below the epidermis and/or the effects are slight, with no or very little social isolation. However, the results are much less satisfactory than the results of ablative laser and there is no firming effect. Other zones than the face can be treated. With the fractional CO(2) and Erbium ablative lasers, which have multiplied over the past 2 years, the much wider impacts cause perforation of the epidermis and there is a zone of ablation by laser photovaporization, with a zone of thermal damage below. The results are better in correcting photoaging of the face, without, however, achieving the efficacy of ablative lasers, which remain the reference technique. However, the effects are not insignificant, requiring at least 5 days of social isolation.

  9. Isotope fractionation of benzene during partitioning - Revisited.

    PubMed

    Kopinke, F-D; Georgi, A; Imfeld, G; Richnow, H-H

    2017-02-01

    Isotope fractionation between benzene-D0 and benzene-D6 caused by multi-step partitioning of the benzenes between water and two organic solvents, n-octane and 1-octanol, as well as between water and the gas phase, was measured. The obtained fractionation factors αH = KH/KD are αH = 1.080 ± 0.015 and αH = 1.074 ± 0.015 for extraction into n-octane and 1-octanol, respectively, and αH = 1.049 ± 0.010 for evaporation from aqueous solution. The comparison of solvent- and gas-phase partitioning reveals that about 2/3 of the driving force of fractionation is due to different interactions in the aqueous phase, whereas 1/3 is due to different interactions in the organic phase. The heavy benzene isotopologue behaves more 'hydrophilically' and the light one more 'hydrophobically'. This synergistic alignment gives rise to relatively large fractionation effects in partitioning between water and non-polar organic matter. In contrast to a previous study, there is no indication of strong fractionation by specific interactions between benzene and octanol. Partitioning under non-equilibrium conditions yields smaller apparent fractionation effects due to opposite trends of thermodynamic and kinetic fractionation parameters, i.e. partition and diffusion coefficients of the isotopologues. This may have consequences which should be taken into account when considering isotope fractionation due to sorption in environmental compartments.

  10. Fractional channel multichannel analyzer

    DOEpatents

    Brackenbush, Larry W.; Anderson, Gordon A.

    1994-01-01

    A multichannel analyzer incorporating the features of the present invention obtains the effect of fractional channels thus greatly reducing the number of actual channels necessary to record complex line spectra. This is accomplished by using an analog-to-digital converter in the asynscronous mode, i.e., the gate pulse from the pulse height-to-pulse width converter is not synchronized with the signal from a clock oscillator. This saves power and reduces the number of components required on the board to achieve the effect of radically expanding the number of channels without changing the circuit board.

  11. Fractional channel multichannel analyzer

    DOEpatents

    Brackenbush, L.W.; Anderson, G.A.

    1994-08-23

    A multichannel analyzer incorporating the features of the present invention obtains the effect of fractional channels thus greatly reducing the number of actual channels necessary to record complex line spectra. This is accomplished by using an analog-to-digital converter in the asynchronous mode, i.e., the gate pulse from the pulse height-to-pulse width converter is not synchronized with the signal from a clock oscillator. This saves power and reduces the number of components required on the board to achieve the effect of radically expanding the number of channels without changing the circuit board. 9 figs.

  12. Solvent Fractionation of Lignin

    SciTech Connect

    Chatterjee, Sabornie; Saito, Tomonori

    2014-01-01

    Lignin is a highly abundant source of renewable carbon that can be considered as a valuable sustainable source of biobased materials. The major issues for the commercial production of value added high performance lignin products are lignin s physical and chemical heterogenities. To overcome these problems, a variety of procedures have been developed to produce pure lignin suitable for high performace applications such as lignin-derived carbon materials. However, most of the isolation procedures affect lignin s properties and structure. In this chapter, a short review of the effect of solvent fractionation on lignin s properties and structure is presented.

  13. 78 FR 29289 - Safety Zone; Big Bay Boom, San Diego Bay, San Diego, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-20

    ... Big Bay Boom Fireworks display from 8:45 p.m. to 10 p.m. on July 4, 2013. These proposed safety zones... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Big Bay Boom, San Diego Bay, San Diego, CA... 3316). 4. Public Meeting We do not now plan to hold a public meeting. But you may submit a request...

  14. 33 CFR 167.103 - In the approaches to Narragansett Bay, RI, and Buzzards Bay, MA: Buzzards Bay approach.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... zone 1 mile wide is established and is centered upon the following geographical positions: Latitude... the southern limit of the Narragansett Bay approach traffic separation zone to latitude 41°24.70'...

  15. Body Fractions: A Physical Approach to Fraction Learning

    ERIC Educational Resources Information Center

    Mills, Judith

    2011-01-01

    Many students experience great difficulty understanding the meaning of fractions. For many students who have spent their early mathematics lessons focusing on counting (whole) numbers, recognising that there are many numbers between those whole numbers called fractional numbers, is quite revolutionary. The foundation of understanding fractions is…

  16. Radionuclides in Chesapeake Bay sediments

    NASA Technical Reports Server (NTRS)

    Cressy, P. J., Jr.

    1976-01-01

    Natural and manmade gamma-ray emitting radionuclides were measured in Chesapeake Bay sediments taken near the Calvert Cliffs Nuclear Power Plant site. Samples represented several water depths, at six locations, for five dates encompassing a complete seasonal cycle. Radionuclide contents of dry sediments ranged as follows: Tl-208, 40 to 400 pCi/kg; Bi-214, 200 to 800 pCi/kg; K, 0.04 to 2.1 percent; Cs-137 5 to 1900 pCi/kg; Ru106, 40 to 1000 pCikg Co60, 1 to 27 pCi/kg. In general, radionuclide contents were positively correlated with each other and negatively correlated with sediment grain size.

  17. 'Victoria Crater' from 'Duck Bay'

    NASA Technical Reports Server (NTRS)

    2006-01-01

    NASA's Mars rover Opportunity edged 3.7 meters (12 feet) closer to the top of the 'Duck Bay' alcove along the rim of 'Victoria Crater' during the rover's 952nd Martian day, or sol (overnight Sept. 27 to Sept. 28), and gained this vista of the crater. The rover's navigation camera took the seven exposures combined into this mosaic view of the crater's interior. This crater has been the mission's long-term destination for the past 21 Earth months.

    The far side of the crater is about 800 meters (one-half mile) away. The rim of the crater is composed of alternating promontories, rocky points towering approximately 70 meters (230 feet) above the crater floor, and recessed alcoves, such as Duck Bay. The bottom of the crater is covered by sand that has been shaped into ripples by the Martian wind. The rocky cliffs in the foreground have been informally named 'Cape Verde,' on the left, and 'Cabo Frio,' on the right.

    Victoria Crater is about five times wider than 'Endurance Crater,' which Opportunity spent six months examining in 2004, and about 40 times wider than 'Eagle Crater,' where Opportunity first landed. The great lure of Victoria is an expectation that the thick stack of geological layers exposed in the crater walls could reveal the record of past environmental conditions over a much greater span of time than Opportunity has read from rocks examined earlier in the mission.

    This view is presented as a cylindrical projection with geometric seam correction.

  18. Effects of water exchange and vegetation on the macroinvertebrate fauna composition of shallow land-uplift bays in the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Hansen, Joakim P.; Wikström, Sofia A.; Kautsky, Lena

    2008-04-01

    Shallow bays with soft sediment bottoms are common habitats along the Swedish and Finnish Baltic Sea coastline. These bays undergo a process of geomorphometric evolution with the natural isostatic land-uplift process, whereby open bays and sounds decrease in depth and are gradually isolated from the sea, forming bays with narrow openings. This study tested the relationship between the morphometric isolation of the bays from the sea and the macroinvertebrate fauna community of these bays. Additionally, we tested the specific role of the submerged vegetation as an indicator of the macroinvertebrate fauna community. We chose two environmental factors for the analyses, water exchange of the bays and the taxon richness of the macroflora in the bays. We found a hierarchical relationship between water exchange, flora taxon richness, and fauna biomass and taxon richness using structural equation modelling: decreased biomass and taxon richness of fauna were related to decreased flora taxon richness, which in turn was related to decreased water exchange. Using multivariate redundancy analysis, the two environmental factors included in the model were found to explain 47.7% of the variation in the fauna taxon composition and 57.5% of the variation in the functional feeding groups of the fauna. Along the morphometric isolation gradient of the bays, the fauna assemblages changed from a community dominated by gastropods, bivalves, and crustaceans, to a community mainly consisting of a few insect taxa. Moreover, the proportion of predators, gathering collectors, and shredders increased while that of filtering collectors and scrapers decreased. Our results indicate that the density and taxon richness of macroinvertebrate fauna are higher in less morphometrically isolated bays than in more isolated bays in the Baltic Sea. Furthermore, we suggest that the taxon richness of macroflora can serve as an indicator of the fauna community.

  19. Ejection Fraction Heart Failure Measurement

    MedlinePlus

    ... Thromboembolism Aortic Aneurysm More Ejection Fraction Heart Failure Measurement Updated:Feb 15,2017 The ejection fraction (EF) is an important measurement in determining how well your heart is pumping ...

  20. Mercury Isotopic Composition of Young-of-Year Fish in San Francisco Bay

    NASA Astrophysics Data System (ADS)

    Gehrke, G. E.; Blum, J. D.; Slotton, D. G.; Greenfield, B. K.

    2009-12-01

    Variations in the stable isotopic composition of mercury (Hg) can provide information about sources and biogeochemical transformations of Hg in the environment. Mass-dependent fractionation of Hg isotopes, reported as δ202Hg relative to NIST 3133, has been observed during multiple processes including volatilization, diffusion, reduction and de-methylation. Large mass-independent fractionation of Hg (>0.2‰) reported as Δ199Hg, has been observed only during photochemical reduction of Hg and MeHg. In this study we analyzed the Hg isotopic composition of sediments and young (<4 months) fish from localized polyhaline habitats throughout San Francisco Bay to investigate sources of Hg to the aquatic food web and Hg cycling. Mississippi silverside have δ202Hg values ranging from -0.25 to +0.60‰, with regional variation among South and Lower South Bay (+0.10 to +0.60‰), San Pablo Bay (-0.25 to -0.03‰), and Suisun Bay (+0.13 to +0.42‰). Fish δ202Hg values roughly correlate with sediment δ202Hg values from the same sites. We suggest that each of the Guadalupe, Petaluma, and Sacaramento-San Joaquin river systems supply a distinct source of Hg to San Francisco Bay, likely associated with contaminated sediment. Mississippi silverside have Δ199Hg values ranging +0.46 to +1.55‰. Unlike the δ202Hg values, fish Δ199Hg values do not vary in a regular pattern throughout the Bay. Rather, fish from approximately one-third of sites analyzed exhibit relatively elevated Δ199Hg (> 0.8‰), possibly associated with high water clarity. In all fish analyzed, the ratio of Δ199Hg to Δ201Hg values have a narrow range of 1.19 to 1.40 (avg = 1.26 ± 0.06). These ratios in fish are consistent with laboratory studies of photochemical MeHg degradation, which yielded Δ199Hg: Δ201Hg ratios of ~1.3 (Bergquist and Blum, 2007). We suggest that Δ199Hg in fish varies with the extent of photochemical MeHg degradation prior to food web uptake. Bergquist, B. A. and Blum, J. D., 2007

  1. Quantum Theory of Jaynes' Principle, Bayes' Theorem, and Information

    NASA Astrophysics Data System (ADS)

    Haken, Hermann

    2014-12-01

    After a reminder of Jaynes' maximum entropy principle and of my quantum theoretical extension, I consider two coupled quantum systems A,B and formulate a quantum version of Bayes' theorem. The application of Feynman's disentangling theorem allows me to calculate the conditional density matrix ρ (A|B) , if system A is an oscillator (or a set of them), linearly coupled to an arbitrary quantum system B. Expectation values can simply be calculated by means of the normalization factor of ρ (A|B) that is derived.

  2. Pockmarks in the floor of Penobscot Bay, Maine

    USGS Publications Warehouse

    Scanlon, K.M.; Knebel, H. J.

    1989-01-01

    Hundreds of depressions (pockmarks) were found within a 40 square kilometer area of the sea floor near the head of Penobscot Bay, Maine. These roughly circular depressions range in diameter from 10 to 300 meters and extend as much as 30 meters below the surrounding sea floor. The pockmarks have formed in marine mud of Holocene age, which unconformably overlies glaciomarine deposits. The presence of shallow interstitial gas in the mud suggests that the pockmarks are related to the excipe of gas from the sediments, although other factors must be involved. ?? 1989 Springer-Verlag New York Inc.

  3. Chesapeake Bay Watershed Implementation Plans (WIPs)

    EPA Pesticide Factsheets

    This page provides an overview of Watershed Implementation Plans (WIP) and how they play an important role in restoring the Chesapeake Bay. The page also provides links to each jurisdiction's Phase I, II, and III WIP.

  4. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... intended passage. (b) The draw of the Maple-Oregon Bridge, mile 4.17 at Sturgeon Bay, shall open on signal... the Maple-Oregon Street drawbridge, shall open simultaneously for larger commercial vessels, as...

  5. 33 CFR 117.1101 - Sturgeon Bay.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... intended passage. (b) The draw of the Maple-Oregon Bridge, mile 4.17 at Sturgeon Bay, shall open on signal... the Maple-Oregon Street drawbridge, shall open simultaneously for larger commercial vessels, as...

  6. Help From Above For Bay Waters

    EPA Pesticide Factsheets

    Actions being taken by a Hopewell, VA. plant as a result of a major EPA Clean Air Act settlement will significantly reduce nitrogen pollution that falls from the atmosphere and impacts the Chesapeake Bay and local waters

  7. Benthic harpacticoid copepods of Jiaozhou Bay, Qingdao

    NASA Astrophysics Data System (ADS)

    Ma, Lin; Li, Xinzheng

    2016-09-01

    The species richness of benthic harpacticoid copepod fauna in Jiaozhou Bay, Qingdao, on the southern coast of Shandong Peninsula, has not been comprehensively studied. We present a preliminary inventory of species for this region based on material found in nine sediment samples collected from 2011 to 2012. Our list includes 15 species belonging to 15 genera in 9 families, the most speciose family was the Miraciidae Dana, 1846 (seven species); all other families were represented by single species only. Sediment characteristics and depth are determined to be important environmental determinants of harpacticoid distribution in this region. We briefly detail the known distributions of species and provide a key to facilitate their identification. Both harpacticoid species richness and the species/genus ratio in Jiaozhou Bay are lower than in Bohai Gulf and Gwangyang Bay. The poor knowledge of the distribution of benthic harpacticoids, in addition to low sampling effort in Jiaozhou Bay, likely contribute to low species richness.

  8. Underwater Grass Comeback Helps Chesapeake Bay

    EPA Pesticide Factsheets

    The fortified Susquehanna Flats, the largest bed of underwater grasses in the Chesapeake Bay, seems able to withstand a major weather punch. Its resilience is contributing to an overall increase in the Bay’s submerged aquatic vegetation.

  9. BENTHIC MACROFAUNAL ALIENS IN WILLAPA BAY

    EPA Science Inventory

    Benthic macrofaunal samples were collected at random stations in Willapa Bay, WA, in four habitats [eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis)] in 1996 and in seven habitats (Z...

  10. Fractional Hopfield Neural Networks: Fractional Dynamic Associative Recurrent Neural Networks.

    PubMed

    Pu, Yi-Fei; Yi, Zhang; Zhou, Ji-Liu

    2016-07-14

    This paper mainly discusses a novel conceptual framework: fractional Hopfield neural networks (FHNN). As is commonly known, fractional calculus has been incorporated into artificial neural networks, mainly because of its long-term memory and nonlocality. Some researchers have made interesting attempts at fractional neural networks and gained competitive advantages over integer-order neural networks. Therefore, it is naturally makes one ponder how to generalize the first-order Hopfield neural networks to the fractional-order ones, and how to implement FHNN by means of fractional calculus. We propose to introduce a novel mathematical method: fractional calculus to implement FHNN. First, we implement fractor in the form of an analog circuit. Second, we implement FHNN by utilizing fractor and the fractional steepest descent approach, construct its Lyapunov function, and further analyze its attractors. Third, we perform experiments to analyze the stability and convergence of FHNN, and further discuss its applications to the defense against chip cloning attacks for anticounterfeiting. The main contribution of our work is to propose FHNN in the form of an analog circuit by utilizing a fractor and the fractional steepest descent approach, construct its Lyapunov function, prove its Lyapunov stability, analyze its attractors, and apply FHNN to the defense against chip cloning attacks for anticounterfeiting. A significant advantage of FHNN is that its attractors essentially relate to the neuron's fractional order. FHNN possesses the fractional-order-stability and fractional-order-sensitivity characteristics.

  11. How Weird Are Weird Fractions?

    ERIC Educational Resources Information Center

    Stuffelbeam, Ryan

    2013-01-01

    A positive rational is a weird fraction if its value is unchanged by an illegitimate, digit-based reduction. In this article, we prove that each weird fraction is uniquely weird and initiate a discussion of the prevalence of weird fractions.

  12. The random continued fraction transformation

    NASA Astrophysics Data System (ADS)

    Kalle, Charlene; Kempton, Tom; Verbitskiy, Evgeny

    2017-03-01

    We introduce a random dynamical system related to continued fraction expansions. It uses random combinations of the Gauss map and the Rényi (or backwards) continued fraction map. We explore the continued fraction expansions that this system produces, as well as the dynamical properties of the system.

  13. Fractional diffusion on bounded domains

    DOE PAGES

    Defterli, Ozlem; D'Elia, Marta; Du, Qiang; ...

    2015-03-13

    We found that the mathematically correct specification of a fractional differential equation on a bounded domain requires specification of appropriate boundary conditions, or their fractional analogue. In this paper we discuss the application of nonlocal diffusion theory to specify well-posed fractional diffusion equations on bounded domains.

  14. Numerical approaches to fractional calculus and fractional ordinary differential equation

    NASA Astrophysics Data System (ADS)

    Li, Changpin; Chen, An; Ye, Junjie

    2011-05-01

    Nowadays, fractional calculus are used to model various different phenomena in nature, but due to the non-local property of the fractional derivative, it still remains a lot of improvements in the present numerical approaches. In this paper, some new numerical approaches based on piecewise interpolation for fractional calculus, and some new improved approaches based on the Simpson method for the fractional differential equations are proposed. We use higher order piecewise interpolation polynomial to approximate the fractional integral and fractional derivatives, and use the Simpson method to design a higher order algorithm for the fractional differential equations. Error analyses and stability analyses are also given, and the numerical results show that these constructed numerical approaches are efficient.

  15. Ecology of Buzzards Bay: An Estuarine Profile

    DTIC Science & Technology

    1996-09-01

    Surface, and GroundwaterFlows 29 3.2. Salinity , Temperature, and Density 31 3.3. Circulation/Currents and the Tidal and Wind Regime 33 Chapter 4...from 2 years of data from the Westport and Weweantic Rivers 30 3.3. Temperature and salinity profiles from the northern end ofBuzzards Bay through...subsequent minor dilution of salinity results in bay water salinity concentra- tions approximating that of nearby oceanic waters. The salinity

  16. Improving measurement of Chesapeake Bay's dead zone

    NASA Astrophysics Data System (ADS)

    Schultz, Colin

    2013-09-01

    In the 1930s, researchers first noticed that the Chesapeake Bay had a dead zone, an expanse of water with drastically reduced concentrations of oxygen. In the 1980s, hypoxia—low-oxygen conditions—gave way in some places to anoxia—a near-total depletion of dissolved oxygen. A lack of oxygen makes the water inhospitable for many marine organisms, and the Chesapeake Bay is the focus of major ecosystem rehabilitation efforts.

  17. Temporal and spatial behavior of pharmaceuticals in Narragansett Bay, Rhode Island, United States

    EPA Science Inventory

    The behavior of active pharmaceutical ingredients (APIs) in urban estuaries is not well understood. In this study, 15 high volume usage APIs were measured over a one year period throughout Narragansett Bay, RI, USA to determine factors controlling their concentration and distrib...

  18. Predicting thermal regimes of stream networks across the Chesapeake Bay Watershed: Natural and anthropogenic influences

    EPA Science Inventory

    Thermal regimes are a critical factor in models predicting joint effects of watershed management activities and climate change on fish habitat suitability. We have compiled a database of lotic temperature time series across the Chesapeake Bay Watershed (725 station-year combinat...

  19. Contribution of Cultural Eutrophication to Marsh Loss in Jamaica Bay (NY)

    EPA Science Inventory

    Loss of salt marsh area in the Jamaica Bay Estuary (NY) has accelerated in recent years, with loss rates as high as 45 acres per year. A contributing factor to this acceleration is likely cultural eutrophication due to over 6 decades of sewage effluent inputs. We examined marsh...

  20. Biofuels and the bay: Characterizing health and ecosystem impacts in the Chesapeake

    EPA Science Inventory

    The global climate crisis has stimulated the search for alternative fuels. Biofuels have been the focus of a recent report by the Chesapeake Bay Commission that evaluated alternative fuel development efforts in the local area. Already under stress from anthropomorphic factors,...