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Sample records for gaussian beam model

  1. Twisted Gaussian Schell-model beams

    SciTech Connect

    Simon, R. ); Mukunda, N. Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore )

    1993-01-01

    The authors introduce a new class of partially coherent axially symmetric Gaussian Schell-model (GSM) beams incorporating a new twist phase quadratic in configuration variables. This phase twists the beam about its axis during propagation and is shown to be bounded in strength because of the positive semidefiniteness of the cross-spectral density. Propagation characteristics and invariants for such beams are derived and interpreted, and two different geometric representations are developed. Direct effects of the twist phase on free propagation as well as in parabolic index fibers are demonstrated. Production of such twisted GSM beams, starting with Li-Wolf anisotropic GSM beams, is described. 34 refs., 3 figs.

  2. Experimental Method of Generating Electromagnetic Gaussian Schell-model Beams

    DTIC Science & Technology

    2015-03-26

    EXPERIMENTAL METHOD OF GENERATING ELECTROMAGNETIC GAUSSIAN SCHELL-MODEL BEAMS THESIS Matthew J. Gridley, Captain, USAF AFIT-ENG-MS-15-M-058...not subject to copyright protection in the United States. AFIT-ENG-MS-15-M-058 EXPERIMENTAL METHOD OF GENERATING ELECTROMAGNETIC GAUSSIAN SCHELL-MODEL...UNLIMITED AFIT-ENG-MS-15-M-058 EXPERIMENTAL METHOD OF GENERATING ELECTROMAGNETIC GAUSSIAN SCHELL-MODEL BEAMS Matthew J. Gridley, B.S.E.E. Captain, USAF

  3. Multi-Gaussian Schell-model vortex beam

    NASA Astrophysics Data System (ADS)

    Zhang, Yongtao; Liu, Lin; Zhao, Chengliang; Cai, Yangjian

    2014-02-01

    Multi-Gaussian Schell-model (MGSM) beam was introduced recently (Sahin and Korotkova, 2012 [34], and Korotkova et al., 2012 [35]). In this paper, multi-Gaussian Schell-model vortex (MGSMV) beam is introduced as a natural extension of MGSM beam. The explicit expression for the cross-spectral density of a MGSMV beam propagating through a stigmatic ABCD optical system is derived and the focusing properties of a MGSMV beam are studied in detail. It is found that we can shape the focused beam profile by varying the initial beam parameters, which will be useful in material thermal processing and particle trapping.

  4. Ghost imaging with twisted Gaussian Schell-model beam.

    PubMed

    Cai, Yangjian; Lin, Qiang; Korotkova, Olga

    2009-02-16

    Based on the classical optical coherence theory, ghost imaging with twisted Gaussian Schell-model (GSM) beams is analyzed. It is found that the twist phase of the GSM beam has strong influence on ghost imaging. As the absolute value of the twist factor increases, the ghost image disappears gradually, but its visibility increases. This phenomenon is caused by the fact that the twist phase enhances the transverse spatial coherence of the twisted GSM beam on propagation.

  5. Elliptical Laguerre-Gaussian correlated Schell-model beam.

    PubMed

    Chen, Yahong; Liu, Lin; Wang, Fei; Zhao, Chengliang; Cai, Yangjian

    2014-06-02

    A new kind of partially coherent beam with non-conventional correlation function named elliptical Laguerre-Gaussian correlated Schell-model (LGCSM) beam is introduced. Analytical propagation formula for an elliptical LGCSM beam passing through a stigmatic ABCD optical system is derived. The elliptical LGCSM beam exhibits unique features on propagation, e.g., its intensity in the far field (or in the focal plane) displays an elliptical ring-shaped beam profile, being qualitatively different from the circular ring-shaped beam profile of the circular LGCSM beam. Furthermore, we carry out experimental generation of an elliptical LGCSM beam with controllable ellipticity, and measure its focusing properties. Our experimental results are consistent with the theoretical predictions. The elliptical LGCSM beam will be useful in atomic optics.

  6. Gaussian Schell-model beams propagating through polarization gratings.

    PubMed

    Piquero, G; Borghi, R; Santarsiero, M

    2001-06-01

    The effects of polarization gratings on partially coherent beams are investigated by studying a Gaussian Schell-model beam impinging on a linear polarizer whose transmission axis varies periodically along one transverse direction. Analytical expressions for the beam polarization-coherence matrix after the grating are obtained. In particular, the evolution of the degree of polarization upon propagation is analyzed. Different behaviors of the output beam, depending on the beam parameters and on the period of the grating, are exhibited. In particular, it is shown that, by suitably choosing the latter quantities, it is possible to obtain not only any desirable value of the degree of polarization of the output beam but also particular distributions of such parameters across the transverse sections of the beam.

  7. Diffraction of cosine-Gaussian-correlated Schell-model beams.

    PubMed

    Pan, Liuzhan; Ding, Chaoliang; Wang, Haixia

    2014-05-19

    The expression of spectral density of cosine-Gaussian-correlated Schell-model (CGSM) beams diffracted by an aperture is derived, and used to study the changes in the spectral density distribution of CGSM beams upon propagation, where the effect of aperture diffraction is emphasized. It is shown that, comparing with that of GSM beams, the spectral density distribution of CGSM beams diffracted by an aperture has dip and shows dark hollow intensity distribution when the order-parameter n is big enough. The central intensity increases with increasing truncation parameter of aperture. The comparative study of spectral density distributions of CGSM beams with aperture and that of without aperture is performed. Furthermore, the effect of order-parameter n and spatial coherence of CGSM beams on the spectral density distribution is discussed in detail. The results obtained may be useful in optical particulate manipulation.

  8. Vector Hermite-Gaussian correlated Schell-model beam.

    PubMed

    Chen, Yahong; Wang, Fang; Yu, Jiayi; Liu, Lin; Cai, Yangjian

    2016-07-11

    A new kind of partially coherent vector beam named vector Hermite-Gaussian correlated Schell-model (HGCSM) beam is introduced as a natural extension of recently introduced scalar HGCSM beam. The realizability and beam conditions for a vector HGCSM beam with uniform state of polarization (SOP) or non-uniform SOP are derived, respectively. Furthermore, analytical formulae for a vector HGCSM beam propagating in free space are derived, and the propagation properties of a vector HGCSM beam with uniform SOP or non-uniform SOP in free space are studied and analyzed in detail. We find that the behaviors of a vector HGCSM beam on propagation are quite different from those of a conventional vector partially coherent beam with uniform SOP or non-uniform SOP, and modulating the structures of the correlation functions cannot only modulate the intensity distribution, but also the state of polarization, the degree of polarization and the polarization singularities of a partially coherent vector beam on propagation. Furthermore, we report experimental generation of a radially polarized HGCSM beam for the first time. Our results provide a novel way for polarization modulation.

  9. Modeling the interferometric radius measurement using Gaussian beam propagation

    SciTech Connect

    Medicus, Katherine M.; Snyder, James J.; Davies, Angela

    2006-12-01

    We model the interferometric radius measurement using Gaussian beam propagation to identify biases in the measurement due to using a simple geometric ray-trace model instead of the more complex Gaussian model. The radius measurement is based on using an interferometer to identify the test part's position when it is at two null locations, and the distance between the positions is an estimate of the part's radius. The null condition is observed when there is no difference in curvature between the reflected reference and the test wavefronts, and a Gaussian model will provide a first-order estimate of curvature changes due to wave propagation and therefore changes to the radius measurement. We show that the geometric ray assumption leads to radius biases (errors) that are a strong function of the test part radius and increase as the radius of the part decreases. We tested for a bias for both microscaled(<1 mm) and macroscaled parts. The bias is of the order of parts in 105 for micro-optics with radii a small fraction of a millimeter and much smaller for macroscaled optics. The amount of bias depends on the interferometer configuration (numerical aperture, etc.), the nominal radius of the test part, and the distances in the interferometer.

  10. Modeling the radiation of ultrasonic phased-array transducers with Gaussian beams.

    PubMed

    Huang, Ruiju; Schmerr, Lester W; Sedov, Alexander

    2008-12-01

    A new transducer beam model, called a multi-Gaussian array beam model, is developed to simulate the wave fields radiated by ultrasonic phased-array transducers. This new model overcomes the restrictions on using ordinary multi-Gaussian beam models developed for large single-element transducers in phased-array applications. It is demonstrated that this new beam model can effectively model the steered and focused beams of a linear phased-array transducer.

  11. Nonparaxial multi-Gaussian beam models and measurement models for phased array transducers.

    PubMed

    Zhao, Xinyu; Gang, Tie

    2009-01-01

    A nonparaxial multi-Gaussian beam model is proposed in order to overcome the limitation that paraxial Gaussian beam models lose accuracy in simulating the beam steering behavior of phased array transducers. Using this nonparaxial multi-Gaussian beam model, the focusing and steering sound fields generated by an ultrasonic linear phased array transducer are calculated and compared with the corresponding results obtained by paraxial multi-Gaussian beam model and more exact Rayleigh-Sommerfeld integral model. In addition, with help of this novel nonparaxial method, an ultrasonic measurement model is provided to investigate the sensitivity of linear phased array transducers versus steering angles. Also the comparisons of model predictions with experimental results are presented to certify the accuracy of this provided measurement model.

  12. Gaussian-Schell-model beams propagating through rough gratings.

    PubMed

    Torcal-Milla, Francisco Jose; Sanchez-Brea, Luis Miguel

    2011-03-01

    In this work we analyze the near-field intensity distribution produced by a rough grating illuminated with a Gaussian-Schell-model beam. This kind of grating is formed by rough and smooth slits. Statistical techniques are used to describe the grating, and the Fresnel approach is used to perform the propagation of light. Two kinds of coherence affect the light propagation. One of them comes from the light beam, since it is not totally coherent. The other one comes from the rough topography of the grating surface. We have found that the Talbot effect is not present just after the grating, but it gradually increases. In addition, the contrast of the self-images decreases from a certain distance due to the coherence properties of the illumination beam. Then, the self-imaging process is only present between two specific distances from the grating. To corroborate the analytical results, we have performed numerical simulations for the mean intensity distribution based on the Sommerfeld-Rayleigh approach, showing their validity.

  13. Propagation properties of Laguerre-Gaussian correlated Schell-model beam in non-Kolmogorov turbulence.

    PubMed

    Zhou, Yuan; Yuan, Yangsheng; Qu, Jun; Huang, Wei

    2016-05-16

    Analytical formulas are derived for the average intensity, the root-mean-square (rms) angular width, and the M2-factor of Laguerre-Gaussian correlated Schell-model (LGCSM) beam propagating in non-Kolmogorov turbulence. The influence of the beam and turbulence parameters on the LGCSM beam is numerically calculated. It is shown that the quality of the LGCSM beam can be improved by choosing appropriate beam or turbulence parameter values. It is also found that the LGCSM beam has advantage over the Gaussian Schell-model (GSM) beam for reducing the turbulence-induced degradation. Our results will have some theoretical reference value for optical communications.

  14. Simulation of ultrasonic surface waves with multi-Gaussian and point source beam models

    SciTech Connect

    Zhao, Xinyu; Schmerr, Lester W. Jr.; Li, Xiongbing; Sedov, Alexander

    2014-02-18

    In the past decade, multi-Gaussian beam models have been developed to solve many complicated bulk wave propagation problems. However, to date those models have not been extended to simulate the generation of Rayleigh waves. Here we will combine Gaussian beams with an explicit high frequency expression for the Rayleigh wave Green function to produce a three-dimensional multi-Gaussian beam model for the fields radiated from an angle beam transducer mounted on a solid wedge. Simulation results obtained with this model are compared to those of a point source model. It is shown that the multi-Gaussian surface wave beam model agrees well with the point source model while being computationally much more efficient.

  15. Experimental determination of the radius of curvature of an isotropic Gaussian Schell-model beam.

    PubMed

    Zhu, Shijun; Chen, Yahong; Cai, Yangjian

    2013-02-01

    We propose a method to determine the radius of curvature of an isotropic Gaussian Schell-model (GSM) beam by measuring the transverse beam widths and the transverse coherence widths at two different planes. Furthermore, we carry out experimental determination of the radius of curvature of a GSM beam. Using the measured beam parameters, we carry out a comparative study of the propagation properties of a GSM beam both theoretically and experimentally. Our experimental results agree well with theoretical predictions.

  16. Tensor ABCD law for partially coherent twisted anisotropic Gaussian-Schell model beams.

    PubMed

    Lin, Qiang; Cai, Yangjian

    2002-02-15

    A 4 x 4 complex curvature tensor M>(-1) is introduced to describe partially coherent anisotropic Gaussian-Schell model (GSM) beams. An analytical propagation formula for the cross-spectral density of partially coherent anisotropic GSM beams is derived. The propagation law of M(-1) that is also derived may be called partially coherent tensor ABCD law. The analytical formulas presented here are useful in treating the propagation and transformation of partially coherent anisotropic GSM beams, which include previous results for completely coherent Gaussian beams as special cases.

  17. Experimental generation of cosine-Gaussian-correlated Schell-model beams with rectangular symmetry.

    PubMed

    Liang, Chunhao; Wang, Fei; Liu, Xianlong; Cai, Yangjian; Korotkova, Olga

    2014-02-15

    Cosine-Gaussian-correlated Schell-model sources whose degree of coherence (DOC) is of circular symmetry have been introduced just recently [Opt. Lett. 38, 2578 (2013)]. In this Letter, we propose a model for a source whose DOC is the superposition of two 1D cosine-Gaussian-correlated Schell-model sources, i.e., possesses rectangular symmetry. The novel model sources and beams they generate are termed rectangular cosine-Gaussian Schell-model (RCGSM). The RCGSM beam exhibits unique features on propagation, e.g., its intensity in the far field (or in the focal plane) displays a four-beamlet array profile, being qualitatively different from the ring-shaped profile of the CGSM beam whose DOC is of circular symmetry. Furthermore, we have carried out experimental generation of the proposed beam and measured its focusing properties. Our experimental results are consistent with the theoretical predictions.

  18. Cosine-Gaussian correlated Schell-model pulsed beams.

    PubMed

    Ding, Chaoliang; Korotkova, Olga; Zhang, Yongtao; Pan, Liuzhan

    2014-01-13

    A new class of partially coherent pulses of Schell type with cosine-Gaussian temporal degree of coherence is introduced. Such waves are termed the Cosine-Gaussian Schell-model (CGSM) pulses. The analytic expression for the temporal mutual coherence function of the CGSM pulse in dispersive media is derived and used to study the evolution of its intensity distribution and its temporal degree of coherence. Further, the numerical calculations are performed in order to show the dependence of the intensity profile and the temporal degree of coherence of the CGSM pulse on the incident pulse duration, the initial temporal coherence length, the order-parameter n and the dispersion of the medium. The most important feature of the novel pulsed wave is its ability to split into two pulses on passage in a dispersive medium at some critical propagation distance. Such critical distance and the subsequent evolution of the split pulses are shown to depend on the source parameters and on the properties of the medium in which the pulse travels.

  19. GAUSSIAN BEAM LASER RESONATOR PROGRAM

    NASA Technical Reports Server (NTRS)

    Cross, P. L.

    1994-01-01

    In designing a laser cavity, the laser engineer is frequently concerned with more than the stability of the resonator. Other considerations include the size of the beam at various optical surfaces within the resonator or the performance of intracavity line-narrowing or other optical elements. Laser resonators obey the laws of Gaussian beam propagation, not geometric optics. The Gaussian Beam Laser Resonator Program models laser resonators using Gaussian ray trace techniques. It can be used to determine the propagation of radiation through laser resonators. The algorithm used in the Gaussian Beam Resonator program has three major components. First, the ray transfer matrix for the laser resonator must be calculated. Next calculations of the initial beam parameters, specifically, the beam stability, the beam waist size and location for the resonator input element, and the wavefront curvature and beam radius at the input surface to the first resonator element are performed. Finally the propagation of the beam through the optical elements is computed. The optical elements can be modeled as parallel plates, lenses, mirrors, dummy surfaces, or Gradient Index (GRIN) lenses. A Gradient Index lens is a good approximation of a laser rod operating under a thermal load. The optical system may contain up to 50 elements. In addition to the internal beam elements the optical system may contain elements external to the resonator. The Gaussian Beam Resonator program was written in Microsoft FORTRAN (Version 4.01). It was developed for the IBM PS/2 80-071 microcomputer and has been implemented on an IBM PC compatible under MS DOS 3.21. The program was developed in 1988 and requires approximately 95K bytes to operate.

  20. Fast Pencil Beam Dose Calculation for Proton Therapy Using a Double-Gaussian Beam Model.

    PubMed

    da Silva, Joakim; Ansorge, Richard; Jena, Rajesh

    2015-01-01

    The highly conformal dose distributions produced by scanned proton pencil beams (PBs) are more sensitive to motion and anatomical changes than those produced by conventional radiotherapy. The ability to calculate the dose in real-time as it is being delivered would enable, for example, online dose monitoring, and is therefore highly desirable. We have previously described an implementation of a PB algorithm running on graphics processing units (GPUs) intended specifically for online dose calculation. Here, we present an extension to the dose calculation engine employing a double-Gaussian beam model to better account for the low-dose halo. To the best of our knowledge, it is the first such PB algorithm for proton therapy running on a GPU. We employ two different parameterizations for the halo dose, one describing the distribution of secondary particles from nuclear interactions found in the literature and one relying on directly fitting the model to Monte Carlo simulations of PBs in water. Despite the large width of the halo contribution, we show how in either case the second Gaussian can be included while prolonging the calculation of the investigated plans by no more than 16%, or the calculation of the most time-consuming energy layers by about 25%. Furthermore, the calculation time is relatively unaffected by the parameterization used, which suggests that these results should hold also for different systems. Finally, since the implementation is based on an algorithm employed by a commercial treatment planning system, it is expected that with adequate tuning, it should be able to reproduce the halo dose from a general beam line with sufficient accuracy.

  1. Scintillation index of a multi-Gaussian Schell-model beam in turbulent atmosphere

    NASA Astrophysics Data System (ADS)

    Yuan, Yangsheng; Liu, Xianlong; Wang, Fei; Chen, Yahong; Cai, Yangjian; Qu, Jun; Eyyuboğlu, Halil T.

    2013-09-01

    Multi-Gaussian Schell-model (MGSM) beam was introduced recently [Sahin and Korotkova, Opt. Lett. 37 (2012) 2970; Korotkova et al., J. Opt. Soc. Am. A 29 (2012) 2159]. In this paper, an explicit expression for the scintillation index of a multi-Gaussian Schell-model (MGSM) beam in weakly or extremely strong turbulent atmosphere is derived with the help of a tensor method. Applying the derived formulae, the scintillation properties of a MGSM beam and a GSM beam in weakly or extremely strong turbulent atmosphere are studied numerically and comparatively. Our results show that a MGSM beam has advantage over a GSM beam for reducing turbulence-induced scintillation, which will be useful for long-distance free-space optical communications.

  2. A reciprocity inequality for Gaussian Schell-model beams and some of its consequences

    SciTech Connect

    Friberg, Ari T.; Visser, Taco D.; Wolf, Emil

    2000-03-15

    A reciprocity inequality is derived, involving the effective size of a planar, secondary, Gaussian Schell-model source and the effective angular spread of the beam that the source generates. The analysis is shown to imply that a fully spatially coherent source of that class (which generates the lowest-order Hermite-Gaussian laser mode) has certain minimal properties. (c) 2000 Optical Society of America.

  3. Second-order moments of an electromagnetic Gaussian Schell-model beam in a uniaxial crystal.

    PubMed

    Shen, Yan; Liu, Lin; Zhao, Chengliang; Yuan, Yangsheng; Cai, Yangjian

    2014-02-01

    We derive the analytical expressions for the second-order moments of an electromagnetic Gaussian Schell-model (EGSM) beam propagating in a uniaxial crystal. With the help of the derived formulas, we study the evolution properties of the propagation factor, the effective radius of curvature and the Rayleigh range of an EGSM beam in a uniaxial crystal. It is found that the evolution properties of an EGSM beam in a uniaxial crystal are much different from its evolution properties in free space and are closely determined by the initial beam parameters and the parameters of the uniaxial crystal. The uniaxial crystal provides one way for modulating the properties of an EGSM beam.

  4. Propagation factors of cosine-Gaussian-correlated Schell-model beams in non-Kolmogorov turbulence.

    PubMed

    Xu, Hua-Feng; Zhang, Zhou; Qu, Jun; Huang, Wei

    2014-09-22

    Based on the extended Huygens-Fresnel principle and second-order moments of the Wigner distribution function (WDF), we have studied the relative root-mean-square (rms) angular width and the propagation factor of cosine-Gaussian-correlated Schell-model (CGSM) beams propagating in non-Kolmogorov turbulence. It has been found that the CGSM beam has advantage over the Gaussian Schell-model (GSM) beam for reducing the turbulence-induced degradation, and this advantage will be more obvious for the beams with larger parameter n and spatial coherence δ or under the condition of stronger fluctuation of turbulence. The CGSM beam with larger parameter n or smaller spatial coherence δ will be less affected by the turbulence. In addition, the effects of the slope-parameter α, inner and outer scale and the refractive-index structure constant of the non-Kolmogorov's power spectrum on the propagation factor are also analyzed in detailed.

  5. Experimental demonstration of a Laguerre-Gaussian correlated Schell-model vortex beam.

    PubMed

    Chen, Yahong; Wang, Fei; Zhao, Chengliang; Cai, Yangjian

    2014-03-10

    Laguerre-Gaussian correlated Schell-model (LGCSM) vortex beam is introduced as an extension of LGCSM beam which was proposed [Opt. Lett.38, 91 (2013)Opt. Lett.38, 1814 (2013)] just recently. Explicit formula for a LGCSM vortex beam propagating through a stigmatic ABCD optical system is derived, and the propagation properties of such beam in free space and the focusing properties of such beam are studied numerically. Furthermore, we carry out experimental generation of a LGCSM vortex beam, and studied its focusing properties. It is found that the propagation and focusing properties of a LGCSM vortex beam are different from that of a LGCSM beam, and we can shape the beam profile of a LGCSM vortex at the focal plane (or in the far field) by varying its initial spatial coherence. Our experimental results are consistent with the theoretical predictions, and our results will be useful for particle trapping.

  6. Propagation of a Laguerre-Gaussian correlated Schell-model beam in strongly nonlocal nonlinear media

    NASA Astrophysics Data System (ADS)

    Qiu, Yunli; Chen, Zhaoxi; He, Yingji

    2017-04-01

    Analytical expressions for the cross-spectral density function and the second-order moments of the Wigner distribution function of a Laguerre-Gaussian correlated Schell-model (LGCSM) beam propagating in strongly nonlocal nonlinear media are derived. The propagation properties, such as beam irradiance, beam width, the spectral degree of coherence and the propagation factor of a LGCSM beam inside the media are investigated in detail. The effect of the beam parameters and the input power on the evolution properties of a LGCSM is illustrated numerically. It is found that the beam width varies periodically or keeps invariant for a certain proper input power. And both the beam irradiance and the spectral degree of coherence of the LGCSM beam change periodically with the propagation distance for the arbitrary input power which however has no influence on the propagation factor. The coherent length and the mode order mainly affect the evolution speed of the LGCSM beam in strongly nonlocal nonlinear media.

  7. Propagation of Gaussian Schell-model Array beams in free space and atmospheric turbulence

    NASA Astrophysics Data System (ADS)

    Mao, Yonghua; Mei, Zhangrong; Gu, Juguan

    2016-12-01

    Based on the extended Huygens-Fresnel principle, the evolution behavior of the spectral density and the spectral degree of coherence of the beam produced by a recently introduced novel class of Gaussian Schell-model Arrays (GSMA) source in free space and turbulence atmospheric are explored and comparatively analyzed. And the influence of the fractal constant of the atmospheric power spectrum and refractive-index structure constant on the spectral density and the spectral degree of coherence of beams are analyzed. It is shown that the optical lattice profile is stable when beams propagate in free space, but the spectral density eventually is suppressed and transformed into a Gaussian profiles when it passes at sufficiently large distances through the turbulent atmosphere. The distributions of the spectral degree of coherence in far field eventually transformed into a shrink Gaussian profile relative to free space which means that the degree of spatial coherence turns worse.

  8. Evolution properties of Bessel-Gaussian Schell-model beams in non-Kolmogorov turbulence.

    PubMed

    Wang, Xiaoyang; Yao, Mingwu; Qiu, Zhiliang; Yi, Xiang; Liu, Zengji

    2015-05-18

    The analytical expressions for the spectral degree of coherence, the effective radius of curvature and the propagation factor of the Bessel-Gaussian Schell-model (BGSM) beam in turbulent atmosphere are derived based on the extended Huygens-Fresnel principle and the second-order moments of the Wigner distribution function (WDF). The evolution properties of BGSM beams propagating in non-Kolmogorov turbulence are investigated by a set of numerical examples. It is demonstrated that the spectral degree of coherence of the BGSM beam evolves into Gaussian profile twice with the increasing of the propagation distance. The turbulence-induced degradation can be remarkably reduced by using the BGSM beam with the proper source parameters. The effects that the generalized refractive-index structure constant, outer and inner scales, and the spectral index of spatial power spectrum of atmospheric turbulence have on the evolution properties of BGSM beams are also discussed in detail.

  9. Propagation of stochastic Gaussian-Schell model array beams in turbulent atmosphere.

    PubMed

    Zhu, Yingbin; Zhao, Daomu; Du, Xinyue

    2008-10-27

    Analytical formulas for the elements of the 2x2 cross-spectral density matrix of a kind of stochastic electromagnetic array beam propagating through the turbulent atmosphere are derived with the help of vector integration. Two types of superposition (i.e. the correlated superposition and the uncorrelated superposition) are considered. The changes in the spectral density and in the spectral degree of polarization of such an array beam generated by isotropic or anisotropic electromagnetic Gaussian Schell-model sources on propagation are determined by the use of the analytical formulas. It is shown by numerical calculations that for the array beam composed by isotropic Gaussian-Schell model sources, the spectral degree of polarization in the sufficiently far field returns to the value of the array source; for the array beam composed by anisotropic sources, the spectral degree of polarization in the far field approaches a fixed value that is different from the source.

  10. Statistical properties of a nonparaxial Gaussian Schell-model beam in a uniaxial crystal.

    PubMed

    Zhang, Lina; Cai, Yangjian

    2011-07-04

    Nonparaxial propagation theory of coherent beams in a uniaxial crystal is extended to the partially coherent case. An analytical formula for the 3×3 cross-spectral density matrix of a nonparaxial Gaussian Schell-model (GSM) beam propagating in a uniaxial crystal orthogonal to the optical axis is derived. Statistical properties, such as the spectral intensity and the degree of polarization, of a nonparaxial GSM beam in a uniaxial crystal are studied numerically. It is found that the statistical properties of a nonparaxial GSM beam are closely determined by its initial beam parameters and the parameters of the crystal. Uniaxial crystal can be used to modulate the spectral density and degree of polarization of a nonparaxial partially coherent beam. Our results may be useful in some applications, such as optical trapping and nonlinear optics, where a light beam with special beam profile and polarization is required.

  11. Spreading and wandering of Gaussian-Schell model laser beams in an anisotropic turbulent ocean

    NASA Astrophysics Data System (ADS)

    Wu, Yuqian; Zhang, Yixin; Zhu, Yun; Hu, Zhengda

    2016-09-01

    The effect of anisotropic turbulence on the spreading and wandering of Gaussian-Schell model (GSM) laser beams propagating in an ocean is studied. The long-term spreading of a GSM beam propagating through the paraxial channel of a turbulent ocean is also developed. Expressions of random wander for such laser beams are derived in an anisotropic turbulent ocean based on the extended Huygens-Fresnel principle. We investigate the influence of parameters in a turbulent ocean on the beam wander and spreading. Our results indicate that beam spreading and random beam wandering are smaller without considering the anisotropy of turbulence in the oceanic channel. Salinity fluctuation has a greater contribution to both the beam spreading and beam wander than that of temperature fluctuations in a turbulent ocean. Our results could be helpful for designing a free-space optical wireless communication system in an oceanic environment.

  12. Propagation of partially coherent twisted anisotropic Gaussian Schell-model beams in dispersive and absorbing media.

    PubMed

    Cai, Yangjian; Lin, Qiang; Ge, Di

    2002-10-01

    By adopting a new tensor method, we derived an analytical propagation formula for the cross-spectral density of partially coherent twisted anisotropic Gaussian Schell-model (GSM) beams through dispersive and absorbing media. Using the derived formula, we studied the evolution properties and spectrum properties of twisted anisotropic GSM beams in dispersive and absorbing media. The results show that the dispersive and absorbing media have strong influences on the propagation properties of twisted anisotropic GSM beams and their spectrum evolution. Our method provides a simple and convenient way to study the propagation of twisted anisotropic GSM beams in media with complex refractive index.

  13. Gaussian-Beam Laser-Resonator Program

    NASA Technical Reports Server (NTRS)

    Cross, Patricia L.; Bair, Clayton H.; Barnes, Norman

    1989-01-01

    Gaussian Beam Laser Resonator Program models laser resonators by use of Gaussian-beam-propagation techniques. Used to determine radii of beams as functions of position in laser resonators. Algorithm used in program has three major components. First, ray-transfer matrix for laser resonator must be calculated. Next, initial parameters of beam calculated. Finally, propagation of beam through optical elements computed. Written in Microsoft FORTRAN (Version 4.01).

  14. Shape-invariant difference between two Gaussian Schell-model beams.

    PubMed

    Borghi, R; Gori, F; Guattari, G; Santarsiero, M

    2015-05-01

    The difference between two Gaussian Schell-model cross-spectral densities can give a new genuine correlation function if suitable conditions are met. Generally speaking, the structure of such cross-spectral density changes in a complicated way upon propagation. We consider here the notable exception of shape-invariant beams, and we investigate their intensity and coherence properties. The modal analysis of this class of cross-spectral densities is exploited to devise a synthesis scheme for this type of beam.

  15. Waveform model of a laser altimeter for an elliptical Gaussian beam.

    PubMed

    Yue, Ma; Mingwei, Wang; Guoyuan, Li; Xiushan, Lu; Fanlin, Yang

    2016-03-10

    The current waveform model of a laser altimeter is based on the Gaussian laser beam of the fundamental mode, whose cross section is a circular spot, whereas some of the cross sections of Geoscience Laser Altimeter System lasers are closer to elliptical spots. Based on the expression of the elliptical Gaussian beam and the waveform theory of laser altimeters, the primary parameters of an echo waveform were derived. In order to examine the deduced expressions, a laser altimetry waveform simulator and waveform processing software were programmed and improved under the circumstance of an elliptical Gaussian beam. The result shows that all the biases between the theoretical and simulated waveforms were less than 0.5%, and the derived model of an elliptical spot is universal and can also be used for the conventional circular spot. The shape of the waveforms is influenced by the ellipticity of the laser spot, the target slope, and the "azimuth angle" between the major axis and the slope direction. This article provides the waveform theoretical basis of a laser altimeter under an elliptical Gaussian beam.

  16. Statistical properties of a Laguerre-Gaussian Schell-model beam in turbulent atmosphere.

    PubMed

    Chen, Rong; Liu, Lin; Zhu, Shijun; Wu, Gaofeng; Wang, Fei; Cai, Yangjian

    2014-01-27

    Laguerre-Gaussian Schell-model (LGSM) beam was proposed in theory [Opt. Lett.38, 91 (2013 Opt. Lett.38, 1814 (2013)] just recently. In this paper, we study the propagation of a LGSM beam in turbulent atmosphere. Analytical expressions for the cross-spectral density and the second-order moments of the Wigner distribution function of a LGSM beam in turbulent atmosphere are derived. The statistical properties, such as the degree of coherence and the propagation factor, of a LGSM beam in turbulent atmosphere are studied in detail. It is found that a LGSM beam with larger mode order n is less affected by turbulence than a LGSM beam with smaller mode order n or a GSM beam under certain condition, which will be useful in free-space optical communications.

  17. Orbital angular moment of an electromagnetic Gaussian Schell-model beam with a twist phase.

    PubMed

    Liu, Lin; Huang, Yusheng; Chen, Yahong; Guo, Lina; Cai, Yangjian

    2015-11-16

    We derive the analytical formula for the orbital angular momentum (OAM) flux of a stochastic electromagnetic beam carrying twist phase [i.e., twisted electromagnetic Gaussian Schell-model (TEGSM) beam] in the source plane with the help of the Wigner distribution function. Furthermore, we derive the general expression of the OAM flux of a TEGSM beam on propagation with the help of a tensor method. As numerical examples, we explore the evolution properties of the OAM flux of a TEGSM beam propagating through a cylindrical thin lens or a uniaxial crystal. It is found that the OAM flux of a TEGSM beam closely depends on its twist factors and degree of polarization in the source plane, and one can modulate the OAM flux of a TEGSM beam by a cylindrical thin lens or a uniaxial crystal. Our results may be useful in some applications, such as particle manipulation and free-space optical communications, where light beam with OAM is preferred.

  18. Twisted Gaussian Schell-model beams. II. Spectrum analysis and propagation characteristics

    SciTech Connect

    Sundar, K.; Simon, R. ); Mukunda, N. )

    1993-09-01

    Extending the work of part I of this series, the authors analyze the structure of the eigenvalue spectrum as well as the propagation characteristics of the twisted Gaussian Schell-model beams. The manner in which the twist phase affects the spectrum, and hence the positivity property of the cross-spectral density, is brought out. Propagation characteristics of these beams are simply deduced from the elementary properties of their modes. It is shown that the twist phase lifts the degeneracy in the eigenvalue spectrum on the one hand and acts as incoherence in disguise on the other. An abstract Hilbert-space operator bringing out the cross-spectral density of the twisted Gaussian Schell-model beam is explicitly constructed, bringing out the useful similarity between these cross-spectral densities and quantum-mechanical thermal-state-density operators of isotropic two-dimensional oscillators, with a term proportional to the angular momentum added to the Hamiltonian. 10 refs.

  19. Optical trapping Rayleigh particles by using focused multi-Gaussian Schell-model beams.

    PubMed

    Liu, Xiayin; Zhao, Daomu

    2014-06-20

    We numerically investigate the radiation forces of multi-Gaussian Schell-model (MGSM) beams, in which the degree of coherence is modeled by the multi-Gaussian function, exerted on the Rayleigh dielectric sphere. By simulation of the forces calculation it is found that the steepness of the edge of the intensity profile (i.e., the summation index M) and the initial coherence width of the MGSM beams play important roles in the trapping range and stability. We can increase the trapping range at the focal plane by increasing the value of M or decreasing the initial coherence of the MGSM beams. It is also found that the trapping stability becomes lower due to the increase of the value of M or the decrease of coherence. Furthermore, the trapping stability under different conditions is explicitly analyzed. The results presented here are helpful for some possible applications.

  20. Propagation of electromagnetic multi-Gaussian Schell-model beams with astigmatic aberration in turbulent ocean.

    PubMed

    Lu, Chuanyi; Zhao, Daomu

    2016-10-10

    An analytical expression for the elements of the cross-spectral density matrix of electromagnetic multi-Gaussian Schell-model beams with astigmatic aberration propagating through the turbulent ocean is derived. We investigate the statistical characteristics of the beams on propagation in great detail. It is found that, due to astigmatism, the circular symmetry of such beams suffers a certain degree of damage in the near field. In addition, astigmatism also destroys the attractive far-field flat profiles in free space. Meanwhile, we also show that astigmatism and oceanic turbulence both have certain effects on the spectral degree of polarization.

  1. Propagation of specular and anti-specular Gaussian Schell-model beams in oceanic turbulence

    NASA Astrophysics Data System (ADS)

    Zhou, Zhaotao; Guo, Mengwen; Zhao, Daomu

    2017-01-01

    On the basis of the extended Huygens-Fresnel principle and the unified theory of coherence and polarization of light, we investigate the propagation properties of the specular and anti-specular Gaussian Schell-model (GSM) beams through oceanic turbulence. It is shown that the specularity of specular GSM beams and the anti-specularity of anti-specular GSM beams are destroyed on propagation in oceanic turbulence. The spectral density and the spectral degree of coherence are also studied in detail. The results may be helpful for underwater communication.

  2. Experimental observation of truncated fractional Fourier transform for a partially coherent Gaussian Schell-model beam.

    PubMed

    Wang, Fei; Cai, Yangjian; Lin, Qiang

    2008-08-01

    The truncated fractional Fourier transform (FRT) is applied to a partially coherent Gaussian Schell-model (GSM) beam. The analytical propagation formula for a partially coherent GSM beam propagating through a truncated FRT optical system is derived by using a tensor method. Furthermore, we report the experimental observation of the truncated FRT for a partially coherent GSM beam. The experimental results are consistent with the theoretical results. Our results show that initial source coherence, fractional order, and aperture width (i.e., truncation parameter) have strong influences on the intensity and coherence properties of the partially coherent beam in the FRT plane. When the aperture width is large, both the intensity and the spectral degree of coherence in the FRT plane are of Gaussian distribution. As the aperture width decreases, the diffraction pattern gradually appears in the FRT plane, and the spectral degree of coherence becomes of non-Gaussian distribution. As the coherence of the initial GSM beam decreases, the diffraction pattern for the case of small aperture widths gradually disappears.

  3. Propagation of Gaussian-Schell beam in turbulent atmosphere of three-layer altitude model.

    PubMed

    Chu, Xiuxiang; Qiao, Chunhong; Feng, Xiaoxing; Chen, Ruipin

    2011-07-20

    We propose a method that is used to derive the moment radius of intensity distribution in a turbulent atmosphere. From this study, we have found that the second moment radius is affected only by the first-order expansion coefficient of the wave structure function. If our attention is directed to a higher moment radius, a higher order approximation of the expansion needs to be used. As an example, the propagation of a Gaussian-Schell beam in a slant path has been studied based on the turbulent atmosphere of a three-layer model. The variation of some beam properties, such as the relative waist width, angular spread, and kurtosis parameter with the initial waist width, wavelength, and zenith angle, has been analyzed and discussed in detail. The study shows that there is little difference between the three-layer model and the Kolmogorov model in studying uplink propagation, and the difference is large for downlink propagation. The intensity profile of the Gaussian beam in turbulence does not keep a Gaussian shape unless the beam spreading due to turbulence is very large or very small.

  4. Twisted Gaussian Schell-model beams. I. Symmetry structure and normal-mode spectrum

    SciTech Connect

    Simon, R.; Sundar, K. ); Mukunda, N. )

    1993-09-01

    The authors present a comprehensive normal-mode decomposition analysis for the recently introduced class of twisted Gaussian Schell-model fields in partially coherent beam optics. The formal analogies to quantum mechanics in two dimensions are exploited. The authors also make effective use of a dynamical SU(2) symmetry of these fields to achieve the mode decomposition and to determine the spectrum. The twist phase is nonseparable in nature, rendering it nontrivially two dimensional. The consequences of this, resulting in the need to use Laguerre-Gaussian functions rather than products of Hermite-Gaussians, are carefully analyzed. An important identity involving these sets of special functions is established and is used in deriving the spectrum. 10 refs.

  5. Generation and propagation of an electromagnetic Gaussian Schell-model vortex beam.

    PubMed

    Liu, Xianlong; Wang, Fei; Liu, Lin; Zhao, Chengliang; Cai, Yangjian

    2015-11-01

    We outline the propagation of an electromagnetic Gaussian Schell-model (EGSM) vortex beam through a paraxial ABCD optical system and analyze the vortex phase-induced changes of the statistical properties, such as average intensity, state of polarization, and degree of polarization (DOP), of a focused EGSM beam. It is found that one can shape the beam profile of an EGSM vortex beam in the focal plane through varying its initial topological charge, DOP, and coherence widths. Furthermore, we first report experimental generation of an EGSM vortex beam and measure its focusing properties in experiments. Our experimental results are consistent with the numerical results and may be useful in material thermal processing and particle trapping.

  6. Effects of coherence on anisotropic electromagnetic Gaussian-Schell model beams on propagation.

    PubMed

    Wang, Hua; Wang, Xiangzhao; Zeng, Aijun; Yang, Kun

    2007-08-01

    An analytical formula for the cross-spectral density matrix of the electric field of anisotropic electromagnetic Gaussian-Schell model beams propagating in free space is derived by using a tensor method. The effects of coherence on those beams are studied. It is shown that two anisotropic stochastic electromagnetic beams that propagate from the source plane z=0 into the half-space z>0 may have different beam shapes (i.e., spectral density) and states of polarization in the half-space, even though they have the same beam shape and states of polarization in the source plane. This fact is due to a difference in the coherence properties of the field in the source plane.

  7. Fractional Fourier transform for partially coherent off-axis Gaussian Schell-model beam.

    PubMed

    Zheng, Chongwei

    2006-09-01

    The fractional Fourier transform (FRT) is applied to a partially coherent off-axis Gaussian Schell-model (GSM) beam, and an analytical formula is derived for the FRT of a partially coherent off-axis GSM beam. The corresponding tensor ABCD law for performing the FRT of a partially coherent off-axis GSM beam is also obtained. As an application example, the FRT of a partially coherent linear laser array that is expanded as a sum of off-axis GSM beams is studied. The derived formulas are used to provide numerical examples. The formulas provide a convenient way to analyze and calculate the FRT of a partially coherent off-axis GSM beam.

  8. Improved Gaussian Beam-Scattering Algorithm

    NASA Technical Reports Server (NTRS)

    Lock, James A.

    1995-01-01

    The localized model of the beam-shape coefficients for Gaussian beam-scattering theory by a spherical particle provides a great simplification in the numerical implementation of the theory. We derive an alternative form for the localized coefficients that is more convenient for computer computations and that provides physical insight into the details of the scattering process. We construct a FORTRAN program for Gaussian beam scattering with the localized model and compare its computer run time on a personal computer with that of a traditional Mie scattering program and with three other published methods for computing Gaussian beam scattering. We show that the analytical form of the beam-shape coefficients makes evident the fact that the excitation rate of morphology-dependent resonances is greatly enhanced for far off-axis incidence of the Gaussian beam.

  9. Propagation of broadband gaussian Schell-model beams in the apertured fractional Fourier transformation systems.

    PubMed

    Mao, Haidan; Du, Xinyue; Chen, Linfei; Zhao, Daomu

    2011-06-01

    On the basis of the fact that a hard-edged aperture function can be expressed as finite matrices with different weighting coefficients, we obtain the analytical formula for the propagation of the broadband gaussian Schell-model (BGSM) beam through the apertured fractional Fourier transformation (AFrFT) system. It is shown by numerical examples that the intensity distribution in the plane of a small fractional order is obviously influenced by the bandwidth when the BGSM beams propagate through the AFrFT system. Further extensions are also pointed out.

  10. Evolution behavior of Gaussian Schell-model vortex beams propagating through oceanic turbulence.

    PubMed

    Huang, Yongping; Zhang, Bin; Gao, Zenghui; Zhao, Guangpu; Duan, Zhichun

    2014-07-28

    The analytical expressions for the cross-spectral density and average intensity of Gaussian Schell-model (GSM) vortex beams propagating through oceanic turbulence are obtained by using the extended Huygens-Fresnel principle and the spatial power spectrum of the refractive index of ocean water. The evolution behavior of GSM vortex beams through oceanic turbulence is studied in detail by numerical simulation. It is shown that the evolution behavior of coherent vortices and average intensity depends on the oceanic turbulence including the rate of dissipation of turbulent kinetic energy per unit mass of fluid, rate of dissipation of mean-square temperature, relative strength of temperature salinity fluctuations, and beam parameters including the spatial correlation length and topological charge of the beams, as well as the propagation distance.

  11. Spectral shifts generated by scattering of Gaussian Schell-model arrays beam from a deterministic medium

    NASA Astrophysics Data System (ADS)

    Wang, Xun; Liu, Zhirong; Huang, Kelin; Sun, Jingbo

    2017-03-01

    According to the theory of first-order Born approximation, analytical expressions for Gaussian Schell-model arrays (GSMA) beam scattered on a deterministic medium in the far-zone are derived. In terms of the analytical formula obtained, shifts of GSMA beam's scattered spectrum are numerically investigated. Results show that the scattering directions sx and sy, effective radius σ of the scattering medium, the initial beam transverse width σ0, correlation widths δx and δy of the source, and line width Γ0 of the incident spectrum closely influence the distributions of normalized scattered spectrum in the far-zone. These features of GSMA beam scattered spectrum could be used to obtain information about the structure of a deterministic medium.

  12. Spatial correlation properties and the spectral intensity distributions of focused Gaussian Schell-model array beams

    NASA Astrophysics Data System (ADS)

    Ji, Xiaoling; Pu, Zhengcai; Jia, Xinhong

    2009-07-01

    The spatial correlation properties and the spectral intensity distributions of focused Gaussian Schell-model (GSM) array beams are studied in detail. The closed-form expressions for the spectral degree of coherence and the spectral intensity of focused GSM array beams are derived. It is shown that the spectral degree of coherence of focused GSM array beams is the same as that of focused GSM beams in the focal plane. On the other hand, it is found that, in the focal plane the spectral intensity distribution of focused GSM array beams is the fringe pattern when the value of the coherence length is small. However, it becomes one peak located at the center as the value of the coherence length is large enough. In the focal plane, the spectral intensity maximum increases and the width of the normalized spectral intensity distribution decreases as the beam number increases. In general, for GSM array beams, the width of the modulus of the spectral degree of coherence in the focal plane always exceeds that of the normalized spectral intensity distribution, which is different from the behavior of focused GSM beams. In addition, the power in the bucket (PIB) and the beam propagation factor ( M2 factor) are also discussed. The main results are explained physically.

  13. Criterion for keeping completely unpolarized or completely polarized stochastic electromagnetic Gaussian Schell-model beams on propagation.

    PubMed

    Du, Xinyue; Zhao, Daomu

    2008-09-29

    The cross-spectral density matrixes of electromagnetic Gaussian Schell-model sources that are completely unpolarized or completely polarized are derived. We find that both the completely unpolarized stochastic electromagnetic Gaussian Schell-model beam and the completely polarized stochastic electromagnetic Gaussian Schell-model beam will keep their spectral degree of polarization or become partially polarized under different constraint conditions during their propagation in free space or through turbulent atmosphere. We give necessary theoretical explanation to the physical phenomena. They are considered as coherence-induced polarization changes and spectral density-induced polarization changes.

  14. Mathematic model analysis of Gaussian beam propagation through an arbitrary thickness random phase screen.

    PubMed

    Tian, Yuzhen; Guo, Jin; Wang, Rui; Wang, Tingfeng

    2011-09-12

    In order to research the statistical properties of Gaussian beam propagation through an arbitrary thickness random phase screen for adaptive optics and laser communication application in the laboratory, we establish mathematic models of statistical quantities, which are based on the Rytov method and the thin phase screen model, involved in the propagation process. And the analytic results are developed for an arbitrary thickness phase screen based on the Kolmogorov power spectrum. The comparison between the arbitrary thickness phase screen and the thin phase screen shows that it is more suitable for our results to describe the generalized case, especially the scintillation index.

  15. Propagation factor of a stochastic electromagnetic Gaussian Schell-model beam.

    PubMed

    Zhu, Shijun; Cai, Yangjian; Korotkova, Olga

    2010-06-07

    Analytical formula is derived for the propagation factor (known asM(2)-factor) of a stochastic electromagnetic Gaussian Schell-model (EGSM) beam in free space and in turbulent atmosphere. In free space, the M(2)-factor of an EGSM beam is mainly determined by its initial degree of polarization, r.m.s. widths of the spectral densities and correlation coefficients, and its value remains invariant on propagation. In turbulent atmosphere, the M(2)-factor of an EGSM beam is also determined by the parameters of the turbulent atmosphere, and its value increases on propagation. The relative M(2)-factor of an EGSM beam with lower correlation factors, larger r.m.s. widths of the spectral densities and longer wavelength is less affected by the atmospheric turbulence. Under suitable conditions, an EGSM beam is less affected by the atmospheric turbulence than a scalar GSM beam (i.e. fully polarized GSM beam). Our results will be useful in long-distance free-space optical communications.

  16. BEAM-BEAM SIMULATIONS FOR DOUBLE-GAUSSIAN BEAMS.

    SciTech Connect

    MONTAG, C.; MALITSKY, N.; BEN-ZVI, I.; LITVINENKO, V.

    2005-05-16

    Electron cooling together with intra-beam scattering results in a transverse distribution that can best be described by a sum of two gaussians, one for the high-density core and one for the tails of the distribution. Simulation studies are being performed to understand the beam-beam interaction of these double-gaussian beams. Here we report the effect of low-frequency random tune modulations on diffusion in double-gaussian beams and compare the effects to those in beam-beam interactions with regular gaussian beams and identical tune shift parameters.

  17. Second-order statistics of a twisted gaussian Schell-model beam in turbulent atmosphere.

    PubMed

    Wang, Fei; Cai, Yangjian

    2010-11-22

    We present a detailed investigation of the second-order statistics of a twisted gaussian Schell-model (TGSM) beam propagating in turbulent atmosphere. Based on the extended Huygens-Fresnel integral, analytical expressions for the second-order moments of the Wigner distribution function of a TGSM beam in turbulent atmosphere are derived. Evolution properties of the second-order statistics, such as the propagation factor, the effective radius of curvature (ERC) and the Rayleigh range, of a TGSM beam in turbulent atmosphere are explored in detail. Our results show that a TGSM beam is less affected by the turbulence than a GSM beam without twist phase. In turbulent atmosphere the Rayleigh range doesn't equal to the distance where the ERC takes a minimum value, which is much different from the result in free space. The second-order statistics are closely determined by the parameters of the turbulent atmosphere and the initial beam parameters. Our results will be useful in long-distance free-space optical communications.

  18. Propagation of multi-Gaussian Schell-model vortex beams in isotropic random media.

    PubMed

    Tang, Miaomiao; Zhao, Daomu

    2015-12-14

    The effect of isotropic and homogeneous random media on propagation characteristics of recently introduced multi-Gaussian Schell-model (MGSM) vortex beams is investigated. The analytical formula for the cross-spectral density function of such a beam propagating in random turbulent media is derived and used to explore the evolution of the spectral density, the degree of coherence and the turbulence-induced spreading. An example illustrates the fact that, at sufficiently large distance from the source, the source correlations modulation of the spectral distribution in free space is shown to be suppressed by the uniformly correlated turbulence. The impacts, arising from the index M, the correlation width of the source and the properties of the medium on such characteristics are analyzed in depth.

  19. Numerical investigation on propagation effects of pseudo-partially coherent Gaussian Schell-model beams in atmospheric turbulence.

    PubMed

    Qian, Xianmei; Zhu, Wenyue; Rao, Ruizhong

    2009-03-02

    The propagation effects of spatially pseudo-partially coherent Gaussian Schell-model beams in atmosphere are investigated numerically. The characteristics of beam spreading, beam wandering and intensity scintillation are analyzed respectively. It is found that the degradation of degree of source coherence may cause reductions of relative beam spreading and scintillation index, which indicates that partially coherent beams are more resistant to atmospheric turbulence than fully coherent beams. And beam wandering is not much sensitive to the change of source coherence. However, a partially coherent beam have a larger spreading than the fully coherent beam both in free space and in atmospheric turbulence. The influences of changing frequency of random phase screen which models the source coherence on the final intensity pattern are also discussed.

  20. Accurately modeling Gaussian beam propagation in the context of Monte Carlo techniques

    NASA Astrophysics Data System (ADS)

    Hokr, Brett H.; Winblad, Aidan; Bixler, Joel N.; Elpers, Gabriel; Zollars, Byron; Scully, Marlan O.; Yakovlev, Vladislav V.; Thomas, Robert J.

    2016-03-01

    Monte Carlo simulations are widely considered to be the gold standard for studying the propagation of light in turbid media. However, traditional Monte Carlo methods fail to account for diffraction because they treat light as a particle. This results in converging beams focusing to a point instead of a diffraction limited spot, greatly effecting the accuracy of Monte Carlo simulations near the focal plane. Here, we present a technique capable of simulating a focusing beam in accordance to the rules of Gaussian optics, resulting in a diffraction limited focal spot. This technique can be easily implemented into any traditional Monte Carlo simulation allowing existing models to be converted to include accurate focusing geometries with minimal effort. We will present results for a focusing beam in a layered tissue model, demonstrating that for different scenarios the region of highest intensity, thus the greatest heating, can change from the surface to the focus. The ability to simulate accurate focusing geometries will greatly enhance the usefulness of Monte Carlo for countless applications, including studying laser tissue interactions in medical applications and light propagation through turbid media.

  1. Generalized huygens-fresnel diffraction integral for misaligned asymmetric first-order optical systems and decentered anisotropic Gaussian Schell-model beams.

    PubMed

    Ding, Guilin; Lü, Baida

    2002-03-01

    The generalized Huygens-Fresnel diffraction integral for misaligned asymmetric first-order optical systems is derived by using the canonical operator method, which enables us to study propagation properties of anisotropic Gaussian Schell-model (AGSM) beams through misaligned asymmetric first-order optical systems. It is shown that under the action of misaligned asymmetric first-order optical systems AGSM beams do not preserve the closed property. Therefore generalized partially coherent anisotropic Gaussian Schell-model beams called decentered anisotropic Gaussian Schell-model (DAGSM) beams are introduced, and AGSM beams can be regarded as a special case of DAGSM beams.

  2. Experimental study on modulation of Stokes parameters on propagation of a Gaussian Schell model beam in free space.

    PubMed

    Verma, Manish; Senthilkumaran, P; Joseph, Joby; Kandpal, H C

    2013-07-01

    The effect on the Stokes parameters of a Gaussian Schell model beam on propagation in free space is studied experimentally and results are matched with the theory [X. H. Zhao, et al. Opt. Express 17, 17888 (2009)] that in general the degree of polarization of a Gaussian Schell model beam doesn't change on propagation if the three spectral correlation widths δ xx, δ yy, δ xy are equal and the beam width parameters σ x =σ y. It is experimentally shown that all the four Stokes parameters at the center of the beam decrease on propagation while the magnitudes of the normalized Stokes parameters and the spectral degree of polarization at the center of the beam remain constant for different propagation distances.

  3. Matching optics for Gaussian beams

    NASA Technical Reports Server (NTRS)

    Gunter, William D. (Inventor)

    1991-01-01

    A system of matching optics for Gaussian beams is described. The matching optics system is positioned between a light beam emitter (such as a laser) and the input optics of a second optics system whereby the output from the light beam emitter is converted into an optimum input for the succeeding parts of the second optical system. The matching optics arrangement includes the combination of a light beam emitter, such as a laser with a movable afocal lens pair (telescope) and a single movable lens placed in the laser's output beam. The single movable lens serves as an input to the telescope. If desired, a second lens, which may be fixed, is positioned in the beam before the adjustable lens to serve as an input processor to the movable lens. The system provides the ability to choose waist diameter and position independently and achieve the desired values with two simple adjustments not requiring iteration.

  4. Coherence properties of a source array derived from a Gaussian Schell-model beam.

    PubMed

    Yoshimura, H; Iwai, T

    1995-11-10

    The spatial coherence properties of a source array derived from a quasi-monochromatic Gaussian Schell-model (GSM) beam are analyzed. The method for realizing the source array by use of a GSM source and a Gaussian amplitude grating was originally proposed in our preceding paper [J. Opt. Soc. Am. A 11, 2112 (1994)], in which the intensity distribution was analyzed. One result that we obtain is that the degree of spatial coherence of each element in the source array is the same as that at the other elements. In particular, each element becomes equivalent to the GSM source and has a high degree of spatial coherence with the other elements if three conditions are satisfied simultaneously: (1) the spatial-coherence length of the GSM source is larger than the GSM source size, (2) the GSM source size normalized by a period of the grating is 0.3 to 0.5, and (3) each aperture size of the grating normalized by the period is 0.05 or less.

  5. Propagation of partially coherent twisted anisotropic Gaussian Schell-model beams through an apertured astigmatic optical system.

    PubMed

    Cai, Yangjian; Hu, Li

    2006-03-15

    By expanding the hard-aperture function into a finite sum of complex Gaussian functions, we derived an approximate analytical formula for a partially coherent twisted anisotropic Gaussian Schell-model (AGSM) beam propagating through an apertured paraxial general astigmatic (GA) optical system by use of a tensor method. The results obtained by using the approximate analytical formula are in good agreement with those obtained by using the numerical integral calculation. Our formulas avoid time-consuming numerical integration and provide a convenient and effective way for studying the propagation and transformation of a partially coherent twisted AGSM beam through an apertured paraxial GA optical system.

  6. Propagation of cosine-Gaussian-correlated Schell-model beams in atmospheric turbulence.

    PubMed

    Mei, Zhangrong; Schchepakina, Elena; Korotkova, Olga

    2013-07-29

    A stochastic beam generated by a recently introduced source of Schell type with cosine-Gaussian spectral degree of coherence is shown to possess interesting novel features on propagation in isotropic and homogeneous atmospheric turbulence with general non-Kolmogorov power spectrum. It is shown that while at small distances from the source the beam's intensity exhibits annular profile with adjustable area of the dark region, the center disappears at sufficiently large distances and the beam's intensity tends to Gaussian form. Hence the 3D bottle beam is produced by the cumulative effect of the random source and the atmosphere. The distances at which the on-axis beam intensity has local minima and maxima are shown to have analytic dependence on the source and the atmospheric parameters. And the influence of the fractal constant of the atmospheric power spectrum and refractive-index structure constant on beam characteristics is analyzed in depth. The novel double-cycle qualitative change in the degree of coherence is shown to occur on atmospheric propagation which was not previously known for any other beams.

  7. Cylindrical quasi-Gaussian beams.

    PubMed

    Mitri, F G

    2013-11-15

    Making use of the complex-source-point method in cylindrical coordinates, an exact solution representing a cylindrical quasi-Gaussian beam of arbitrary waist w(0) satisfying both the Helmholtz and Maxwell's equations is introduced. The Cartesian components of the electromagnetic field are derived stemming from different polarizations of the magnetic and electric vector potentials based on Maxwell's vectorial equations and Lorenz's gauge condition, without any approximations. Computations illustrate the theory for tightly focused and quasi-collimated cylindrical beams. The results are particularly useful in beam-forming design using high-aperture or collimated cylindrical laser beams in imaging microscopy, particle manipulation, optical tweezers, and the study of scattering, radiation forces, and torque on cylindrical structures.

  8. A 2D Gaussian-Beam-Based Method for Modeling the Dichroic Surfaces of Quasi-Optical Systems

    NASA Astrophysics Data System (ADS)

    Elis, Kevin; Chabory, Alexandre; Sokoloff, Jérôme; Bolioli, Sylvain

    2016-08-01

    In this article, we propose an approach in the spectral domain to treat the interaction of a field with a dichroic surface in two dimensions. For a Gaussian beam illumination of the surface, the reflected and transmitted fields are approximated by one reflected and one transmitted Gaussian beams. Their characteristics are determined by means of a matching in the spectral domain, which requires a second-order approximation of the dichroic surface response when excited by plane waves. This approximation is of the same order as the one used in Gaussian beam shooting algorithm to model curved interfaces associated with lenses, reflector, etc. The method uses general analytical formulations for the GBs that depend either on a paraxial or far-field approximation. Numerical experiments are led to test the efficiency of the method in terms of accuracy and computation time. They include a parametric study and a case for which the illumination is provided by a horn antenna. For the latter, the incident field is firstly expressed as a sum of Gaussian beams by means of Gabor frames.

  9. Asymmetric Laguerre-Gaussian beams

    NASA Astrophysics Data System (ADS)

    Kovalev, A. A.; Kotlyar, V. V.; Porfirev, A. P.

    2016-06-01

    We introduce a family of asymmetric Laguerre-Gaussian (aLG) laser beams. The beams have been derived via a complex-valued shift of conventional LG beams in the Cartesian plane. While propagating in a uniform medium, the first bright ring of the aLG beam becomes less asymmetric and the energy is redistributed toward peripheral diffraction rings. The projection of the orbital angular momentum (OAM) onto the optical axis is calculated. The OAM is shown to grow quadratically with increasing asymmetry parameter of the aLG beam, which equals the ratio of the shift to the waist radius. Conditions for the OAM becoming equal to the topological charge have been derived. For aLG beams with zero radial index, we have deduced an expression to define the intensity maximum coordinates and shown the crescent-shaped intensity pattern to rotate during propagation. Results of the experimental generation and rotation of aLG beams agree well with theoretical predictions.

  10. Elegant Gaussian beams for enhanced optical manipulation

    SciTech Connect

    Alpmann, Christina Schöler, Christoph; Denz, Cornelia

    2015-06-15

    Generation of micro- and nanostructured complex light beams attains increasing impact in photonics and laser applications. In this contribution, we demonstrate the implementation and experimental realization of the relatively unknown, but highly versatile class of complex-valued Elegant Hermite- and Laguerre-Gaussian beams. These beams create higher trapping forces compared to standard Gaussian light fields due to their propagation changing properties. We demonstrate optical trapping and alignment of complex functional particles as nanocontainers with standard and Elegant Gaussian light beams. Elegant Gaussian beams will inspire manifold applications in optical manipulation, direct laser writing, or microscopy, where the design of the point-spread function is relevant.

  11. Splitting and combining properties of an elegant Hermite-Gaussian correlated Schell-model beam in Kolmogorov and non-Kolmogorov turbulence.

    PubMed

    Yu, Jiayi; Chen, Yahong; Liu, Lin; Liu, Xianlong; Cai, Yangjian

    2015-05-18

    Elegant Hermite-Gaussian correlated Schell-model (EHGCSM) beam was introduced in theory and generated in experiment just recently [Phys. Rev. A 91, 013823 (2015)]. In this paper, we study the propagation properties of an EHGCSM beam in turbulent atmosphere with the help of the extended Huygens-Fresnel integral. Analytical expressions for the cross-spectral density and the propagation factors of an EHGCSM beam propagating in turbulent atmosphere are derived. The statistical properties, such as the spectral intensity, the spectral degree of coherence and the propagation factors, of an EHGCSM beam in Kolmogorov and non-Kolmogorov turbulence are illustrated numerically. It is found that an EHGCSM beam exhibits splitting and combing properties in turbulent atmosphere, and an EHGCSM beam with large mode orders is less affected by turbulence than an EHGCSM beam with small mode orders or a Gaussian Schell-model beam or a Gaussian beam, which will be useful in free-space optical communications.

  12. Least-squares Gaussian beam migration

    NASA Astrophysics Data System (ADS)

    Yuan, Maolin; Huang, Jianping; Liao, Wenyuan; Jiang, Fuyou

    2017-02-01

    A theory of least-squares Gaussian beam migration (LSGBM) is presented to optimally estimate a subsurface reflectivity. In the iterative inversion scheme, a Gaussian beam (GB) propagator is used as the kernel of linearized forward modeling (demigration) and its adjoint (migration). Born approximation based GB demigration relies on the calculation of Green’s function by a Gaussian-beam summation for the downward and upward wavefields. The adjoint operator of GB demigration accounts for GB prestack depth migration under the cross-correlation imaging condition, where seismic traces are processed one by one for each shot. A numerical test on the point diffractors model suggests that GB demigration can successfully simulate primary scattered data, while migration (adjoint) can yield a corresponding image. The GB demigration/migration algorithms are used for the least-squares migration scheme to deblur conventional migrated images. The proposed LSGBM is illustrated with two synthetic data for a four-layer model and the Marmousi2 model. Numerical results show that LSGBM, compared to migration (adjoint) with GBs, produces images with more balanced amplitude, higher resolution and even fewer artifacts. Additionally, the LSGBM shows a robust convergence rate.

  13. Spreading and evolution behavior of coherent vortices of multi-Gaussian Schell-model vortex beams propagating through non-Kolmogorov turbulence

    NASA Astrophysics Data System (ADS)

    Wang, Xiaoyang; Yao, Mingwu; Yi, Xiang; Qiu, Zhiliang; Liu, Zengji

    2017-01-01

    The explicit closed-form expressions for the beam width and angular spread of multi-Gaussian Schell-model vortex (MGSMV) beams propagating through atmospheric turbulence are derived in this paper. The spreading and evolution behavior of coherent vortices of MGSMV beams in non-Kolmogorov turbulence are investigated quantitatively by some typical numerical examples, where the evolution behavior of coherent vortices is stressed in particular. It is illustrated that MGSMV beams are more resistant to atmospheric turbulence than multi-Gaussian Schell-model (MGSM) non-vortex beams. By increasing the beam index of MGSMV beams, the deleterious turbulence effects can be reduced gradually. As MGSMV beams propagate in non-Kolmogorov turbulence, the position and number of coherent vortices are changeable. The impact of the beam index and fluctuations of atmospheric turbulence on the conservation distance of the topological charge is also explored in depth.

  14. Condition for Gaussian Schell-model beam to maintain the state of polarization on the propagation in free space.

    PubMed

    Zhao, Xinhui; Yao, Yong; Sun, Yunxu; Liu, Chao

    2009-09-28

    In the free space optical communication system with circle polarization shift keying (CPolSK) modulation, the changes of polarization state of light beam have significant influence on the system performance. Keeping the state of polarization (SOP) unchanged on propagation can reduce the bit error rate. Based on the unified theory of coherence and polarization, we derive the sufficient condition for Gaussian Schell-model (GSM) beam to keep the SOP unchanged. We found that when the three spectral correlation widths (delta(xx), delta(yy) and delta(xy)) equal to each other and sigma(x) = sigma(y), the GSM beam maintains the SOP on propagation. This conclusion can be helpful for the design of the transmitter in the CPolSK system.

  15. Theoretical modeling of generation of hat-top intensity profile from Gaussian beam by means of a two-stage beam shaper

    NASA Astrophysics Data System (ADS)

    Haghighatzadeh, A.; Golnabi, H.

    2013-05-01

    Both theoretical and experimental results of an optical beam shaping system are investigated in this report. The described system is a two-stage beam shaping device including a fiber-bundle and a prism-duct. A source light is used to illuminate the fiber-bundle and the image of output beam is captured by a CCD camera. The fiber-bundle output beam shape shows a linear arrangement of circular spots lights, which are placed in a rectangular cross section of about 21.37 mm×2.44 mm. In another study, the photograph picture of the prism output beam is taken by a digital camera. The prism output beam cross section is a square shape with a dimension of about 4×4 mm2. According to the experimental results, the prism duct converted a Gaussian beam profile with multiple-peak distribution to a hat-top beam profile with the uniform intensity distribution. For theoretical investigations, using ZEMAX software a simulation is performed to analyze the beam shaping design. By proper modeling the output beam shape and radiance profiles in position space and angle space of the fiber-bundle and the prism duct are investigated. Theoretical radiance profiles are obtained by using simulated images and results are in agreement with the experimental results.

  16. Radiation damping in pulsed Gaussian beams

    NASA Astrophysics Data System (ADS)

    Harvey, Chris; Marklund, Mattias

    2012-01-01

    We consider the effects of radiation damping on the electron dynamics in a Gaussian-beam model of a laser field. For high intensities, i.e., with dimensionless intensity a0≫1, it is found that the dynamics divides into three regimes. For low-energy electrons (low initial γ factor, γ0) the radiation damping effects are negligible. At higher energies, but still at 2γ0a0 one is in a regime of radiation-reaction-induced electron capture. This capture is found to be stable with respect to the spatial properties of the electron beam and results in a significant energy loss of the electrons. In this regime the plane-wave model of the laser field provides a good description of the dynamics, whereas for lower energies the Gaussian-beam and plane-wave models differ significantly. Finally the dynamics is considered for the case of an x-ray free-electron laser field. It is found that the significantly lower intensities of such fields inhibit the damping effects.

  17. Modeling focusing Gaussian beams in a turbid medium with Monte Carlo simulations.

    PubMed

    Hokr, Brett H; Bixler, Joel N; Elpers, Gabriel; Zollars, Byron; Thomas, Robert J; Yakovlev, Vladislav V; Scully, Marlan O

    2015-04-06

    Monte Carlo techniques are the gold standard for studying light propagation in turbid media. Traditional Monte Carlo techniques are unable to include wave effects, such as diffraction; thus, these methods are unsuitable for exploring focusing geometries where a significant ballistic component remains at the focal plane. Here, a method is presented for accurately simulating photon propagation at the focal plane, in the context of a traditional Monte Carlo simulation. This is accomplished by propagating ballistic photons along trajectories predicted by Gaussian optics until they undergo an initial scattering event, after which, they are propagated through the medium by a traditional Monte Carlo technique. Solving a known problem by building upon an existing Monte Carlo implementation allows this method to be easily implemented in a wide variety of existing Monte Carlo simulations, greatly improving the accuracy of those models for studying dynamics in a focusing geometry.

  18. Temperature modes for nonlinear Gaussian beams.

    PubMed

    Myers, Matthew R; Soneson, Joshua E

    2009-07-01

    In assessing the influence of nonlinear acoustic propagation on thermal bioeffects, approximate methods for quickly estimating the temperature rise as operational parameters are varied can be very useful. This paper provides a formula for the transient temperature rise associated with nonlinear propagation of Gaussian beams. The pressure amplitudes for the Gaussian modes can be obtained rapidly using a method previously published for simulating nonlinear propagation of Gaussian beams. The temperature-mode series shows that the nth temperature mode generated by nonlinear propagation, when normalized by the fundamental, is weaker than the nth heat-rate mode (also normalized by the fundamental in the heat-rate series) by a factor of log(n)/n, where n is the mode number. Predictions of temperature rise and thermal dose were found to be in close agreement with full, finite-difference calculations of the pressure fields, temperature rise, and thermal dose. Applications to non-Gaussian beams were made by fitting the main lobe of the significant modes to Gaussian functions.

  19. Propagation-invariant beams with quantum pendulum spectra: from Bessel beams to Gaussian beam-beams.

    PubMed

    Dennis, Mark R; Ring, James D

    2013-09-01

    We describe a new class of propagation-invariant light beams with Fourier transform given by an eigenfunction of the quantum mechanical pendulum. These beams, whose spectra (restricted to a circle) are doubly periodic Mathieu functions in azimuth, depend on a field strength parameter. When the parameter is zero, pendulum beams are Bessel beams, and as the parameter approaches infinity, they resemble transversely propagating one-dimensional Gaussian wave packets (Gaussian beam-beams). Pendulum beams are the eigenfunctions of an operator that interpolates between the squared angular momentum operator and the linear momentum operator. The analysis reveals connections with Mathieu beams, and insight into the paraxial approximation.

  20. Modulation depth of Michelson interferometer with Gaussian beam.

    PubMed

    Välikylä, Tuomas; Kauppinen, Jyrki

    2011-12-20

    Mirror misalignment or the tilt angle of the Michelson interferometer can be estimated from the modulation depth measured with collimated monochromatic light. The intensity of the light beam is usually assumed to be uniform, but, for example, with gas lasers it generally has a Gaussian distribution, which makes the modulation depth less sensitive to the tilt angle. With this assumption, the tilt angle may be underestimated by about 50%. We have derived a mathematical model for modulation depth with a circular aperture and Gaussian beam. The model reduces the error of the tilt angle estimate to below 1%. The results of the model have been verified experimentally.

  1. Propagation of modified Bessel-Gaussian beams in turbulence

    NASA Astrophysics Data System (ADS)

    Eyyuboğlu, Halil Tanyer; Hardalaç, Fırat

    2008-03-01

    We investigate the propagation characteristics of modified Bessel-Gaussian beams traveling in a turbulent atmosphere. The source beam formulation comprises a Gaussian exponential and the summation of modified Bessel functions. Based on an extended Huygens-Fresnel principle, the receiver plane intensity is formulated and solved down to a double integral stage. Source beam illustrations show that modified Bessel-Gaussian beams, except the lowest order case, will have well-like shapes. Modified Bessel-Gaussian beams with summations will experience lobe slicing and will display more or less the same profile regardless of order content. After propagating in turbulent atmosphere, it is observed that a modified Bessel-Gaussian beam will transform into a Bessel-Gaussian beam. Furthermore it is seen that modified Bessel-Gaussian beams with different Bessel function combinations, but possessing nearly the same profile, will differentiate during propagation. Increasing turbulence strength is found to accelerate the beam transformation toward the eventual Gaussian shape.

  2. Evolution properties of a Laguerre-Gaussian correlated Schell-model beam propagating in uniaxial crystals orthogonal to the optical axis.

    PubMed

    Zhu, Ziren; Liu, Lin; Wang, Fei; Cai, Yangjian

    2015-03-01

    Analytical expressions for the cross-spectral density function and the second-order moments of a Laguerre-Gaussian correlated Schell-model (LGCSM) beam propagating in uniaxial crystals orthogonal to the optical axis are derived. Based on the formulas derived, we study the propagation properties, such as beam irradiance, beam diameters, and the spectral degree of coherence, of a LGCSM beam inside uniaxial crystals in detail. The effect of the initial beam parameters (mode order and spatial coherence length) and the parameters of the uniaxial crystals on the evolution properties of a LGCSM beam is revealed through numerical examples. The uniaxial crystals provide one way to modulate the properties of a LGCSM beam.

  3. Gaussian beam decomposition of high frequency wave fields

    SciTech Connect

    Tanushev, Nicolay M. Engquist, Bjoern; Tsai, Richard

    2009-12-10

    In this paper, we present a method of decomposing a highly oscillatory wave field into a sparse superposition of Gaussian beams. The goal is to extract the necessary parameters for a Gaussian beam superposition from this wave field, so that further evolution of the high frequency waves can be computed by the method of Gaussian beams. The methodology is described for R{sup d} with numerical examples for d=2. In the first example, a field generated by an interface reflection of Gaussian beams is decomposed into a superposition of Gaussian beams. The beam parameters are reconstructed to a very high accuracy. The data in the second example is not a superposition of a finite number of Gaussian beams. The wave field to be approximated is generated by a finite difference method for a geometry with two slits. The accuracy in the decomposition increases monotonically with the number of beams.

  4. Higher order annular Gaussian laser beam propagation in free space

    NASA Astrophysics Data System (ADS)

    Eyyuboglu, Halil T.; Yenice, Yusuf E.; Baykal, Yahya K.

    2006-03-01

    Propagation of higher order annular Gaussian (HOAG) laser beams in free space is examined. HOAG beams are defined as the difference of two Hermite-Gaussian (HG) beams; thus, they can be produced by subtracting a smaller beam from a larger beam, that are cocentered and both possess HG mode field distributions. Such beams can be considered as a generalization of the well-known annular Gaussian beams. We formulate the source and receiver plane characteristics and kurtosis parameter of HOAG beams propagating in free space and evaluate them numerically. In comparison to HG beams, HOAG beams have a broader beam size with outer lobes of kidney shape. The amount of received power within the same receiver aperture size, that is, power in bucket, is generally lower for higher order beams. The convergence of the kurtosis parameter to an asymptotic value for higher order beams takes much longer propagation distances compared to zero-order beams.

  5. Polarization distribution control of anisotropic electromagnetic Gaussian-Schell model beams on free propagation by exploiting correlation properties at the source plane.

    PubMed

    Zhang, Rong; Wang, Xiangzhao; Cheng, Xin; Qiu, Zicheng

    2010-11-01

    When propagating in free space, the transversal distribution of the degree of polarization of an anisotropic electromagnetic Gaussian-Schell model (AEGSM) beam will generally undergo a complex evolution process. We find that this transversal distribution of the degree of polarization of an AEGSM beam can be controlled by exploiting the partial correlation properties of the source. The main research of our paper falls into two parts. First, the concept of analogical propagation of the transversal distribution of the degree of polarization is proposed, and the condition for an AEGSM beam having an analogical propagation is obtained. When an AEGSM beam is on analogical propagation, the distribution of the degree of polarization on any cross section of the beam is always similar to that on the source plane, except that the size of the distribution pattern will expand continuously as the propagation distance increases. Second, the far-field transversal distribution of the degree of polarization is considered, and the condition for the far-field transversal polarization distribution of an AEGSM beam to be always of circularly symmetric shape, no matter how complicated it is on the source, is obtained. Our research is expected to find applications in areas that make use of the polarization properties of random electromagnetic beams.

  6. Electron acceleration by a tightly focused cylindrical vector Gaussian beam

    NASA Astrophysics Data System (ADS)

    Xu, Jian; Yang, Zhen-Jun; Li, Jian-Xing; Zang, Wei-Ping

    2017-02-01

    We have studied the electron acceleration by a tightly focused cylindrical vector Gaussian beam. Different from the Lax series field, cylindrical vector Gaussian beams are vector-beam solutions of Maxwell’s equations and its focusing property can be numerically analyzed by the Richards-Wolf vectorial diffraction theory. Field differences exist between the cylindrical vector Gaussian beam and the Lax series field. The cylindrical vector Gaussian beam increases the asymmetry of the electromagnetic fields, which is more beneficial to the electron acceleration. When the beam waist falls down to the order of the wavelength, the high laser intensity zone is more proper to define the reflection, capture and transmission conditions of the electrons. The injection energy and the injected angle of the electron and the initial phase of the laser beam play important roles for the electron to enter and be trapped by the high laser intensity zone.

  7. Comparison of Gaussian and super Gaussian laser beams for addressing atomic qubits

    NASA Astrophysics Data System (ADS)

    Gillen-Christandl, Katharina; Gillen, Glen D.; Piotrowicz, M. J.; Saffman, M.

    2016-05-01

    We study the fidelity of single-qubit quantum gates performed with two-frequency laser fields that have a Gaussian or super Gaussian spatial mode. Numerical simulations are used to account for imperfections arising from atomic motion in an optical trap, spatially varying Stark shifts of the trapping and control beams, and transverse and axial misalignment of the control beams. Numerical results that account for the three-dimensional distribution of control light show that a super Gaussian mode with intensity I˜ e^{-2(r/w_0)^n} provides reduced sensitivity to atomic motion and beam misalignment. Choosing a super Gaussian with n=6 the decay time of finite temperature Rabi oscillations can be increased by a factor of 60 compared to an n=2 Gaussian beam, while reducing crosstalk to neighboring qubit sites.

  8. Gaussian entanglement generation from coherence using beam-splitters

    NASA Astrophysics Data System (ADS)

    Wang, Zhong-Xiao; Wang, Shuhao; Ma, Teng; Wang, Tie-Jun; Wang, Chuan

    2016-11-01

    The generation and quantification of quantum entanglement is crucial for quantum information processing. Here we study the transition of Gaussian correlation under the effect of linear optical beam-splitters. We find the single-mode Gaussian coherence acts as the resource in generating Gaussian entanglement for two squeezed states as the input states. With the help of consecutive beam-splitters, single-mode coherence and quantum entanglement can be converted to each other. Our results reveal that by using finite number of beam-splitters, it is possible to extract all the entanglement from the single-mode coherence even if the entanglement is wiped out before each beam-splitter.

  9. Angular spread of partially coherent Hermite-cosh-Gaussian beams propagating through atmospheric turbulence.

    PubMed

    Yang, Ailin; Zhang, Entao; Ji, Xiaoling; Lü, Baida

    2008-06-09

    The propagation of partially coherent Hermite-cosh-Gaussian (H-ChG)beams through atmospheric turbulence is studied in detail. The analytical expression for the angular spread of partially coherent H-ChG beams in turbulence is derived. It is shown that the angular spread of partially coherent H-ChG beams with smaller spatial correlation length sigma0, smaller waist width w0, smaller beam parameter Omega0, and larger beam orders m, n is less affected by turbulence than that of partially coherent H-ChG beams with larger sigma0, w0, Omega0, and smaller m, n. Under a certain condition partially coherent H-ChG beams may generate the same angular spread as a fully coherent Gaussian beam in free space and also in atmospheric turbulence. The angular spread of partially coherent Hermite-Gaussian (H-G), cosh-Gaussian (ChG), Gaussian Schell-model (GSM) beams, and fully coherent H-ChG, H-G, ChG, Gaussian beams is studied and treated as special cases of partially coherent H-ChG beams. The results are interpreted physically.

  10. Optical rogue waves generated on Gaussian background beam.

    PubMed

    Liu, Chong; Yang, Zhan-Ying; Zhao, Li-Chen; Xin, Guo-Guo; Yang, Wen-Li

    2014-02-15

    We study optical rogue waves (RWs) in a nonlinear graded-index waveguide with variable coefficients. An exact RW solution on Gaussian background beam is presented, in contrast to the previous studies about RWs, on plane wave background. It is shown that the characteristics of RWs are maintained on Gaussian background beam and that the beam's width is even a bit smaller than the RWs scale. These results may raise the possibility of related experiments and potential applications in nonlinear optics.

  11. Application of Gaussian beam ray-equivalent model and back-propagation artificial neural network in laser diode fast axis collimator assembly.

    PubMed

    Yu, Hao; Rossi, Giammarco; Braglia, Andrea; Perrone, Guido

    2016-08-10

    The paper presents the development of a tool based on a back-propagation artificial neural network to assist in the accurate positioning of the lenses used to collimate the beam from semiconductor laser diodes along the so-called fast axis. After training using a Gaussian beam ray-equivalent model, the network is capable of indicating the tilt, decenter, and defocus of such lenses from the measured field distribution, so the operator can determine the errors with respect to the actual lens position and optimize the diode assembly procedure. An experimental validation using a typical configuration exploited in multi-emitter diode module assembly and fast axis collimating lenses with different focal lengths and numerical apertures is reported.

  12. BER of flat-topped Gaussian beam in slant path turbulent atmosphere

    NASA Astrophysics Data System (ADS)

    Lu, Fang; Han, Yanyan; Han, Xiang-e.; Yang, Rui-ke

    2013-08-01

    Based on the theory of optical wave propagation in the slant path and the ITU-R turbulence structure constant model which is dependent on altitude, the on-axis scintillation index of the flat-topped Gaussian beam at the receiver plane in slant path turbulence was given by using Kolmogorov atmospheric turbulence power spectrum model. The influences of the link altitudes, atmospheric refractive index structure constant C0 at the ground,the source size and the beam order on scintillation index of the flat-topped Gaussian beam are discussed in detail. The result shows that the scintillation index increased first and then decreased with the increase of the beam order. The advantage of a flat-topped Gaussian beam over a single Gaussian beam is restricted to small source sizes, which is consistent with the case of the horizontal path. To find the average bit error rate under weak slant path turbulence, the log-normal distribution model of the intensity fluctuation was used. The influence of beam order and source size on BER was discussed. The result indicates that the smaller sized flat-topped Gaussian beam will bring average bit error rate advantage over the same size Gaussian beam. Our results correctly reduce to the result of the horizontal path with atmospheric structure constant fixed.

  13. Evolution of the frequency chirp of Gaussian pulses and beams when passing through a pulse compressor.

    PubMed

    Li, Derong; Lv, Xiaohua; Bowlan, Pamela; Du, Rui; Zeng, Shaoqun; Luo, Qingming

    2009-09-14

    The evolution of the frequency chirp of a laser pulse inside a classical pulse compressor is very different for plane waves and Gaussian beams, although after propagating through the last (4th) dispersive element, the two models give the same results. In this paper, we have analyzed the evolution of the frequency chirp of Gaussian pulses and beams using a method which directly obtains the spectral phase acquired by the compressor. We found the spatiotemporal couplings in the phase to be the fundamental reason for the difference in the frequency chirp acquired by a Gaussian beam and a plane wave. When the Gaussian beam propagates, an additional frequency chirp will be introduced if any spatiotemporal couplings (i.e. angular dispersion, spatial chirp or pulse front tilt) are present. However, if there are no couplings present, the chirp of the Gaussian beam is the same as that of a plane wave. When the Gaussian beam is well collimated, the introduced frequency chirp predicted by the plane wave and Gaussian beam models are in closer agreement. This work improves our understanding of pulse compressors and should be helpful for optimizing dispersion compensation schemes in many applications of femtosecond laser pulses.

  14. Generation and propagation of a vector cosine-Gaussian correlated beam with radial polarization.

    PubMed

    Zhu, Shijun; Chen, Yahong; Wang, Jing; Wang, Haiyan; Li, Zhenhua; Cai, Yangjian

    2015-12-28

    Scalar cosine-Gaussian-correlated Schell-model (CGCSM) beams of circular or rectangular symmetry were introduced just recently. In this paper, a new kind of partially coherent vector beam named vector CGCSM beam with radial polarization (i.e., radially polarized CGCSM beam) is introduced. The realizability conditions for a radially polarized CGCSM source and the beam condition for radiation generated by such source are derived. The statistical properties, such as the average intensity, the degree of coherence, the degree of polarization and the state of polarization, of a radially polarized CGCSM beam focused by a thin lens are analyzed in detail. It is found that the statistical properties of a radially polarized CGCSM beam are quite different from those of a conventional radial polarized partially coherent beam with Gaussian correlated Schell-model function. Furthermore, we first report experimental generation of a radially polarized CGCSM beam and measure its focusing properties. Our experimental results are consistent with the theoretical predictions.

  15. Radiation pressure acceleration of corrugated thin foils by Gaussian and super-Gaussian beams

    SciTech Connect

    Adusumilli, K.; Goyal, D.; Tripathi, V. K.

    2012-01-15

    Rayleigh-Taylor instability of radiation pressure accelerated ultrathin foils by laser having Gaussian and super-Gaussian intensity distribution is investigated using a single fluid code. The foil is allowed to have ring shaped surface ripples. The radiation pressure force on such a foil is non-uniform with finite transverse component F{sub r}; F{sub r} varies periodically with r. Subsequently, the ripple grows as the foil moves ahead along z. With a Gaussian beam, the foil acquires an overall curvature due to non-uniformity in radiation pressure and gets thinner. In the process, the ripple perturbation is considerably washed off. With super-Gaussian beam, the ripple is found to be more strongly washed out. In order to avoid transmission of the laser through the thinning foil, a criterion on the foil thickness is obtained.

  16. Quantitative comparison of self-healing ability between Bessel–Gaussian beam and Airy beam

    SciTech Connect

    Wen, Wei; Chu, Xiuxiang

    2015-09-15

    The self-healing ability during propagation process is one of the most important properties of non-diffracting beams. This ability has crucial advantages to light sheet-based microscopy to reduce scattering artefacts, increase the quality of the image and enhance the resolution of microscopy. Based on similarity between two infinite-dimensional complex vectors in Hilbert space, the ability to a Bessel–Gaussian beam and an Airy beam have been studied and compared. Comparing the evolution of the similarity of Bessel–Gaussian beam with Airy beam under the same conditions, we find that Bessel–Gaussian beam has stronger self-healing ability and is more stable than that of Airy beam. To confirm this result, the intensity profiles of Bessel–Gaussian beam and Airy beam with different similarities are numerically calculated and compared.

  17. Gaussian entanglement generation from coherence using beam-splitters

    PubMed Central

    Wang, Zhong-Xiao; Wang, Shuhao; Ma, Teng; Wang, Tie-Jun; Wang, Chuan

    2016-01-01

    The generation and quantification of quantum entanglement is crucial for quantum information processing. Here we study the transition of Gaussian correlation under the effect of linear optical beam-splitters. We find the single-mode Gaussian coherence acts as the resource in generating Gaussian entanglement for two squeezed states as the input states. With the help of consecutive beam-splitters, single-mode coherence and quantum entanglement can be converted to each other. Our results reveal that by using finite number of beam-splitters, it is possible to extract all the entanglement from the single-mode coherence even if the entanglement is wiped out before each beam-splitter. PMID:27892537

  18. Entanglement Rate for Gaussian Continuous Variable Beams

    DTIC Science & Technology

    2016-08-24

    e.g. when cavities are involved. To exemplify itsmeaning and potential, we apply it to a four-mode optomechanical setup that enables the simultaneous up...natural characteristics of such a source is obviously the rate at which it generates entanglement. If the source sends out pairs of entangled particles...entanglement rate in such nontrivial situations. It will turn out that our general definition, when applied to stationaryGaussianCVbeams, gives rise to a

  19. LRSP resonance enhanced spatial and angular Goos-Hanchen shift and Imbert-Fedorov shift for Gaussian beam, Laguerre-Gaussian beam and Bessel beam

    NASA Astrophysics Data System (ADS)

    Swain, Prasad Kumar; Goswami, Nabamita; Saha, Ardhendu

    2017-01-01

    A new theoretical approach towards the composite effect of spatial and angular Goos-Hanchen (GH) shift and Imbert-Fedorov (IF) shift for the Gaussian beam, Laguerre-Gaussian beam and Bessel beam with long range surface plasmon (LRSP) resonance is observed, designed and simulated through the variation of incident angle at a wavelength of 1550 nm where the four layered Kreschmann-Rather geometry comprises a ZnSe prism, a liquid crystal layer of E44 and two metal layers of silver. To the best of our knowledge several articles have been devoted, separately considering the Gaussian beam, Laguerre-Gaussian beam and Bessel beam without considering the effect of spatial and angular GH shift and IF shift whereas the exact output beam position can only be identified with the composite effect of these shifts. The investigation of these spatial and angular shifts for Gaussian beam and different orders of Laguerre-Gaussian beam are calculated and represented where these lateral shifts increase with the increment of the modes and further these lateral shifts for Bessel beam have also been analyzed. With this new approach various avenues expedite the way of futuristic applications in the field of fine tuning in optical switching with the accurate beam position using different beams.

  20. Diffraction of Gaussian beams on intracavity Bragg gratings

    NASA Astrophysics Data System (ADS)

    Bitauld, David; Menez, Ludivine; Zaquine, Isabelle; Maruani, Alain; Frey, Robert

    2005-06-01

    The diffraction of Gaussian beams on intracavity Bragg gratings is analyzed theoretically. For reasonable waists the associated beam divergence does not significantly influence the diffraction efficiency of such devices. Nevertheless, the tilt angle of the incident beam, imposed by the Bragg resonance condition, strongly reduces the diffraction efficiency at short grating periods. However, the angular selectivity can be maintained if the Fabry-Perot cavity is tuned to the incident beam direction, which allows the use of small-volume holograms together with a dense angular multiplex. This theoretical analysis can be applied to the optimization of the diffraction properties of Gaussian beams on any intracavity Bragg grating, which could then be used for free-space parallel signal processing.

  1. Non-gaussian statistics of pencil beam surveys

    NASA Technical Reports Server (NTRS)

    Amendola, Luca

    1994-01-01

    We study the effect of the non-Gaussian clustering of galaxies on the statistics of pencil beam surveys. We derive the probability from the power spectrum peaks by means of Edgeworth expansion and find that the higher order moments of the galaxy distribution play a dominant role. The probability of obtaining the 128 Mpc/h periodicity found in pencil beam surveys is raised by more than one order of magnitude, up to 1%. Further data are needed to decide if non-Gaussian distribution alone is sufficient to explain the 128 Mpc/h periodicity, or if extra large-scale power is necessary.

  2. A new method for generating a hollow Gaussian beam

    NASA Astrophysics Data System (ADS)

    Wei, Cun; Lu, Xingyuan; Wu, Gaofeng; Wang, Fei; Cai, Yangjian

    2014-04-01

    Hollow Gaussian beam (HGB) was introduced 10 years ago (Cai et al. in Opt Lett 28:1084, 2003). In this paper, we introduce a new method for generating a HGB through transforming a Laguerre-Gaussian beam with radial index 0 and azimuthal index l into a HGB with mode n = l/2. Furthermore, we report experimental generation of a HGB based on the proposed method, and we carry out experimental study of the focusing properties of the generated HGB. Our experimental results agree well with the theoretical predictions.

  3. Multi-photon resonance phenomena using Laguerre-Gaussian beams

    NASA Astrophysics Data System (ADS)

    Hamideh Kazemi, Seyedeh; Mahmoudi, Mohammad

    2016-12-01

    We study the influence of laser profile on the linewidth of the optical spectrum of multi-photon resonance phenomena. First, we investigate the dependence of the absorption spectrum on the laser profile in a two-level system. Thanks to the Laguerre-Gaussian field, the linewidth of the one-photon optical pumping and two-photon absorption peaks are explicitly narrower than that obtained with a Gaussian field. In the next section, it is shown that, compared to the Gaussian fields, the Laguerre-Gaussian ones reduce the linewidth of the optical spectrum in the coherent population trapping. Interestingly, it turns out that the use of a Laguerre-Gaussian beam makes the linewidth of the spectrum narrower as compared with a Gaussian one in Doppler-broadened electromagnetically induced transparency. Moreover, we study the effect of the laser profile on the Autler-Townes doublet structure in the absorption spectrum for a laser-driven four-level atomic system. We also consider the different values of the Laguerre-Gaussian mode beam waist, and, perhaps more remarkably, we find that for the small waist values, the Autler-Townes doublet can be removed and a prominent narrow central peak appears in the absorption spectrum. Finally, we investigate the effect of the laser profile on the linewidth of the sub-natural three-photon absorption peak of double dark resonance. The differences in the linewidth are quite large, offering potential applications in metrology and isotope separation methods. Our results can be used for super ultra-high resolution laser spectroscopy and to improve the resolution of the technology of isotope/isomer separation and photo-biology even at essential overlap of the spectra of the different particles.

  4. Propagation of Airy Gaussian vortex beams in uniaxial crystals

    NASA Astrophysics Data System (ADS)

    Weihao, Yu; Ruihuang, Zhao; Fu, Deng; Jiayao, Huang; Chidao, Chen; Xiangbo, Yang; Yanping, Zhao; Dongmei, Deng

    2016-04-01

    The propagation dynamics of the Airy Gaussian vortex beams in uniaxial crystals orthogonal to the optical axis has been investigated analytically and numerically. The propagation expression of the beams has been obtained. The propagation features of the Airy Gaussian vortex beams are shown with changes of the distribution factor and the ratio of the extraordinary refractive index to the ordinary refractive index. The correlations between the ratio and the maximum intensity value during the propagation, and its appearing distance have been investigated. Project supported by the National Natural Science Foundation of China (Grant Nos. 11374108, 11374107, 10904041, and 11547212), the Foundation of Cultivating Outstanding Young Scholars of Guangdong Province, China, the CAS Key Laboratory of Geospace Environment, University of Science and Technology of China, the National Training Program of Innovation and Entrepreneurship for Undergraduates (Grant No. 2015093), and the Science and Technology Projects of Guangdong Province, China (Grant No. 2013B031800011).

  5. Non-Gaussian beam dynamics in low energy antiproton storage rings

    NASA Astrophysics Data System (ADS)

    Resta-López, J.; Hunt, J. R.; Welsch, C. P.

    2016-10-01

    In low energy antiproton facilities, where electron cooling is fundamental, the cooling forces together with heating phenomena causing emittance blow-up, such as Intra Beam Scattering (IBS), result in highly non-Gaussian beam distributions. In these cases, a precise simulation of IBS effects is essential to realistically evaluate the long term beam evolution, taking into account the non-Gaussian characteristics of the beam. Here, we analyse the beam dynamics in the Extra Low ENergy Antiproton ring (ELENA), which is a new small synchrotron currently being constructed at CERN to decelerate antiprotons to energies as low as 100 keV. Simulations are performed using the code BETACOOL, comparing different models of IBS.

  6. Laguerre-Gaussian, Hermite-Gaussian, Bessel-Gaussian, and Finite-Energy Airy Beams Carrying Orbital Angular Momentum in Strongly Nonlocal Nonlinear Media

    NASA Astrophysics Data System (ADS)

    Wu, Zhenkun; Gu, Yuzong

    2016-12-01

    The propagation of two-dimensional beams is analytically and numerically investigated in strongly nonlocal nonlinear media (SNNM) based on the ABCD matrix. The two-dimensional beams reported in this paper are described by the product of the superposition of generalized Laguerre-Gaussian (LG), Hermite-Gaussian (HG), Bessel-Gaussian (BG), and circular Airy (CA) beams, carrying an orbital angular momentum (OAM). Owing to OAM and the modulation of SNNM, we find that the propagation of these two-dimensional beams exhibits complete rotation and periodic inversion: the spatial intensity profile first extends and then diminishes, and during the propagation the process repeats to form a breath-like phenomenon.

  7. Interpretation of Extinction in Gaussian-Beam Scattering

    NASA Technical Reports Server (NTRS)

    Lock, James A.

    1995-01-01

    The extinction efficiency for the interaction of a plane wave with a large nonabsorbing spherical particle is approximately 2.0. When a Gaussian beam of half-width w(sub 0) is incident upon a spherical particle of radius a with w(sub 0)/a less than 1, the extinction efficiency attains unexpectedly high or low values, contrary to intuitive expectations. The reason for this is associated with the so-called compensating term in the scattered field, which cancels the field of the Gaussian beam behind the particle, thereby producing the particle's shadow. I introduce a decomposition of the total exterior field into incoming and outgoing portions that are free of compensating terms. It is then shown that a suitably defined interaction efficiency has the intuitively expected asymptotic values of 2.0 for w(sub 0)/a much greater than 1 and 1.0 for w(sub 0)/a much less than 1.

  8. Chopper z-scan technique for elliptic Gaussian beams.

    PubMed

    Dávila-Pintle, J A; Reynoso-Lara, E; Bravo-García, Y E

    2016-09-05

    This paper reports an improvement to the chopper z-scan technique for elliptic Gaussian beams. This improvement results in a higher sensitivity by measuring the ratio of eclipsing time to rotating period (duty cycle) of a chopper that eclipses the beam along the main axis. It is shown that the z-scan curve of the major axis is compressed along the z-axis. This compression factor is equal to the ratio between the minor and major axes. It was found that the normalized peak-valley difference with respect to the linear value does not depend on the axis along which eclipsing occurs.

  9. Far field intensity distributions due to spatial self phase modulation of a Gaussian beam by a thin nonlocal nonlinear media.

    PubMed

    Ramirez, E V Garcia; Carrasco, M L Arroyo; Otero, M M Mendez; Cerda, S Chavez; Castillo, M D Iturbe

    2010-10-11

    In this work we present a simple model that can be used to calculate the far field intensity distributions when a Gaussian beam cross a thin sample of nonlinear media but the response can be nonlocal.

  10. 3D Gaussian Beam Modeling

    DTIC Science & Technology

    2011-09-01

    N00014-09-C-0425 http://hlsresearch.com LONG-TERM GOALS Long-term goals of this research are: • provide the underwater acoustic research ...PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) HLS Research ,3366 North Torrey Pines Court, Suite 310,La Jolla,CA,92037 8. PERFORMING ORGANIZATION...the Matlab version of Bellhop and the VirTEX channel simulator that was developed at HLS Research by Martin Siderius and Michael Porter. Bellhop

  11. Gaussian Schell-model arrays.

    PubMed

    Mei, Zhangrong; Zhao, Daomu; Korotkova, Olga; Mao, Yonghua

    2015-12-01

    We introduce a novel class of planar, quasi-homogeneous Schell-model source for producing far fields with optical lattice average intensity patterns and derive the corresponding beam conditions. The array dimension, lobes intensity profile, and periodicity of the optical lattice can be flexibly tuned by changing the correlation parameters of the source field. It is also found that, with an appropriate choice of the source parameters, the radiant intensity may possess flat-topped intensity patterns.

  12. Scattering of a partially coherent Gaussian-Schell beam from a diffuse target in slant atmospheric turbulence.

    PubMed

    Wu, Zhen-Sen; Li, Ya-Qing

    2011-07-01

    On the basis of the extended Huygens-Fresnel principle, the scattering of partially coherent Gaussian-Schell-model (GSM) beams from a diffuse target in slant double-passage atmospheric turbulence is studied and compared with that of fully coherent Gaussian beams. Using the cross-spectral density function of the GSM beams, we derive the expressions of the mutual coherence function, angle-of-arrival fluctuation, and covariance and variance of the intensity of the scattered field, taking into account the fluctuations of both the log-amplitude and phase. The numerical results are presented, and the influences of the wavelength, propagation distance, and waist radius on scattering properties are discussed. The perturbation region of the normalized intensity variance of the partially coherent GSM beam is smaller than that of the fully coherent Gaussian beam at the middle turbulence level. The normalized intensity variance of long-distance beam propagation is smaller than that of beam propagation along a short distance.

  13. Gaussian beam profile shaping apparatus, method therefor and evaluation thereof

    DOEpatents

    Dickey, Fred M.; Holswade, Scott C.; Romero, Louis A.

    1999-01-01

    A method and apparatus maps a Gaussian beam into a beam with a uniform irradiance profile by exploiting the Fourier transform properties of lenses. A phase element imparts a design phase onto an input beam and the output optical field from a lens is then the Fourier transform of the input beam and the phase function from the phase element. The phase element is selected in accordance with a dimensionless parameter which is dependent upon the radius of the incoming beam, the desired spot shape, the focal length of the lens and the wavelength of the input beam. This dimensionless parameter can also be used to evaluate the quality of a system. In order to control the radius of the incoming beam, optics such as a telescope can be employed. The size of the target spot and the focal length can be altered by exchanging the transform lens, but the dimensionless parameter will remain the same. The quality of the system, and hence the value of the dimensionless parameter, can be altered by exchanging the phase element. The dimensionless parameter provides design guidance, system evaluation, and indication as to how to improve a given system.

  14. Gaussian beam profile shaping apparatus, method therefore and evaluation thereof

    DOEpatents

    Dickey, F.M.; Holswade, S.C.; Romero, L.A.

    1999-01-26

    A method and apparatus maps a Gaussian beam into a beam with a uniform irradiance profile by exploiting the Fourier transform properties of lenses. A phase element imparts a design phase onto an input beam and the output optical field from a lens is then the Fourier transform of the input beam and the phase function from the phase element. The phase element is selected in accordance with a dimensionless parameter which is dependent upon the radius of the incoming beam, the desired spot shape, the focal length of the lens and the wavelength of the input beam. This dimensionless parameter can also be used to evaluate the quality of a system. In order to control the radius of the incoming beam, optics such as a telescope can be employed. The size of the target spot and the focal length can be altered by exchanging the transform lens, but the dimensionless parameter will remain the same. The quality of the system, and hence the value of the dimensionless parameter, can be altered by exchanging the phase element. The dimensionless parameter provides design guidance, system evaluation, and indication as to how to improve a given system. 27 figs.

  15. Fast multiscale Gaussian beam methods for wave equations in bounded convex domains

    SciTech Connect

    Bao, Gang; Lai, Jun; Qian, Jianliang

    2014-03-15

    Motivated by fast multiscale Gaussian wavepacket transforms and multiscale Gaussian beam methods which were originally designed for pure initial-value problems of wave equations, we develop fast multiscale Gaussian beam methods for initial boundary value problems of wave equations in bounded convex domains in the high frequency regime. To compute the wave propagation in bounded convex domains, we have to take into account reflecting multiscale Gaussian beams, which are accomplished by enforcing reflecting boundary conditions during beam propagation and carrying out suitable reflecting beam summation. To propagate multiscale beams efficiently, we prove that the ratio of the squared magnitude of beam amplitude and the beam width is roughly conserved, and accordingly we propose an effective indicator to identify significant beams. We also prove that the resulting multiscale Gaussian beam methods converge asymptotically. Numerical examples demonstrate the accuracy and efficiency of the method.

  16. Optimal focusing conditions of lenses using Gaussian beams

    DOE PAGES

    Franco, Juan Manuel; Cywiak, Moisés; Cywiak, David; ...

    2016-04-02

    By using the analytical equations of the propagation of Gaussian beams in which truncation exhibits negligible consequences, we describe a method that uses the value of the focal length of a focusing lens to classify its focusing performance. In this study, we show that for different distances between a laser and a focusing lens there are different planes where best focusing conditions can be obtained and we demonstrate how the value of the focal length impacts the lens focusing properties. To perform the classification we introduce the term delimiting focal length. As the value of the focal length used inmore » wave propagation theory is nominal and difficult to measure accurately, we describe an experimental approach to calculate its value matching our analytical description. Finally, we describe possible applications of the results for characterizing Gaussian sources, for measuring focal lengths and/or alternatively for characterizing piston-like movements.« less

  17. Optimal focusing conditions of lenses using Gaussian beams

    SciTech Connect

    Franco, Juan Manuel; Cywiak, Moisés; Cywiak, David; Mourad, Idir

    2016-04-02

    By using the analytical equations of the propagation of Gaussian beams in which truncation exhibits negligible consequences, we describe a method that uses the value of the focal length of a focusing lens to classify its focusing performance. In this study, we show that for different distances between a laser and a focusing lens there are different planes where best focusing conditions can be obtained and we demonstrate how the value of the focal length impacts the lens focusing properties. To perform the classification we introduce the term delimiting focal length. As the value of the focal length used in wave propagation theory is nominal and difficult to measure accurately, we describe an experimental approach to calculate its value matching our analytical description. Finally, we describe possible applications of the results for characterizing Gaussian sources, for measuring focal lengths and/or alternatively for characterizing piston-like movements.

  18. Propagation of a cosh-Gaussian beam through an optical system in turbulent atmosphere.

    PubMed

    Chu, Xiuxiang

    2007-12-24

    The propagation of a cosh-Gaussian beam through an arbitrary ABCD optical system in turbulent atmosphere has been investigated. The analytical expressions for the average intensity at any receiver plane are obtained. As an elementary example, the average intensity and its radius at the image plane of a cosh-Gaussian beam through a thin lens are studied. To show the effects of a lens on the average intensity and the intensity radius of the laser beam in turbulent atmosphere, the properties of a collimated cosh-Gaussian beam and a focused cosh-Gaussian beam for direct propagation in turbulent atmosphere are studied and numerically calculated. The average intensity profiles of a cosh-Gaussian beam through a lens can have a shape similar to that of the initial beam for a longer propagation distance than that of a collimated cosh-Gaussian beam for direct propagation. With the increment in the propagation distance, the average intensity radius at the image plane of a cosh-Gaussian beam through a thin lens will be smaller than that at the focal plane of a focused cosh-Gaussian beam for direct propagation. Meanwhile, the intensity distributions at the image plane of a cosh-Gaussian beam through a lens with different w(0) and Omega(0) are also studied.

  19. Radiant exposure level comparison between Gaussian and top hat beams in various scanning patterns.

    PubMed

    U-Thainual, Paweena; Yang, Yi; Le, Hanh N D; Kim, Do-Hyun

    2014-12-20

    The radiant exposure of optical irradiation beams with different scanning parameters has been theoretically studied. We analyzed the difference in radiant exposure introduced by Gaussian and top hat beams. Various parameters such as scanning pattern, aperture position, beam size and scan spacing were also introduced in this study. We found that Gaussian beams introduce higher calculated radiant exposure to the aperture than top hat beams for certain beam size to aperture size ratios. However, as the scan spacing decreases, the radiant exposure difference calculated from Gaussian and top hat beams diminishes.

  20. Second and third harmonic waves excited by focused Gaussian beams.

    PubMed

    Levy, Uri; Silberberg, Yaron

    2015-10-19

    Harmonic generation by tightly-focused Gaussian beams is finding important applications, primarily in nonlinear microscopy. It is often naively assumed that the nonlinear signal is generated predominantly in the focal region. However, the intensity of Gaussian-excited electromagnetic harmonic waves is sensitive to the excitation geometry and to the phase matching condition, and may depend on quite an extended region of the material away from the focal plane. Here we solve analytically the amplitude integral for second harmonic and third harmonic waves and study the generated harmonic intensities vs. focal-plane position within the material. We find that maximum intensity for positive wave-vector mismatch values, for both second harmonic and third harmonic waves, is achieved when the fundamental Gaussian is focused few Rayleigh lengths beyond the front surface. Harmonic-generation theory predicts strong intensity oscillations with thickness if the material is very thin. We reproduced these intensity oscillations in glass slabs pumped at 1550nm. From the oscillations of the 517nm third-harmonic waves with slab thickness we estimate the wave-vector mismatch in a Soda-lime glass as Δk(H)= -0.249μm(-1).

  1. Vortex and anti-vortex compositions of exact elegant Laguerre-Gaussian vector beams

    NASA Astrophysics Data System (ADS)

    Nasalski, W.

    2014-05-01

    Reformulation of conventional beam definitions into their bidirectional versions and use of Hertz potentials make beam fields exact vector solutions to Maxwell's equations. This procedure is applied to higher-order elegant Laguerre-Gaussian beams of transverse magnetic and transverse electric polarization. Their vortex and anti-vortex co-axial compositions of equal and opposite topological charges are given in a closed analytic form. Polarization components of the composed beams are specified by their radial and azimuthal indices. The longitudinal components are common for beam compositions of both types; meanwhile, their transverse components are different and comprise two—nonparaxial and paraxial—separate parts distinguished by a paraxial parameter and its inverse, respectively. The new solutions may appear useful in modeling and tailoring of arbitrary vector beams.

  2. Numerical calculation of beam shifts for higher-order Laguerre-Gaussian beams upon transmission

    NASA Astrophysics Data System (ADS)

    Prajapati, Chandravati

    2017-04-01

    We study numerically the spatial and angular contributions to Goos-Hänchen (GH) and Imbert-Fedorov (IF) shifts for higher-order (| l | ≥ 1) Laguerre-Gaussian (LG) beams upon transmission from a planar interface separating two media. Two kinds of spin-orbit interaction and their role in beam shifts are discussed. Firstly, the interaction between the spin and intrinsic orbital angular momentum (OAM) of the LG beam that produces polarization dependent angular shift which is further coupled to the angular momentum structure of the beam and gives rise to spatial shift in orthogonal direction. Secondly, the interaction between the intrinsic and extrinsic OAM of the beam which produces polarization independent transverse shift, called orbital-Hall effect (OHE). Since the angular and spatial shifts are coupled and the angular shift is dependent on the beam waist, the beam shifts can be tuned to maximize or reduce the resultant shifts for LG beams.

  3. The backward phase flow and FBI-transform-based Eulerian Gaussian beams for the Schroedinger equation

    SciTech Connect

    Leung Shingyu; Qian Jianliang

    2010-11-20

    We propose the backward phase flow method to implement the Fourier-Bros-Iagolnitzer (FBI)-transform-based Eulerian Gaussian beam method for solving the Schroedinger equation in the semi-classical regime. The idea of Eulerian Gaussian beams has been first proposed in . In this paper we aim at two crucial computational issues of the Eulerian Gaussian beam method: how to carry out long-time beam propagation and how to compute beam ingredients rapidly in phase space. By virtue of the FBI transform, we address the first issue by introducing the reinitialization strategy into the Eulerian Gaussian beam framework. Essentially we reinitialize beam propagation by applying the FBI transform to wavefields at intermediate time steps when the beams become too wide. To address the second issue, inspired by the original phase flow method, we propose the backward phase flow method which allows us to compute beam ingredients rapidly. Numerical examples demonstrate the efficiency and accuracy of the proposed algorithms.

  4. Ghost reflections of Gaussian beams in anamorphic optical systems with an application to Michelson interferometer.

    PubMed

    Abd El-Maksoud, Rania H

    2016-02-20

    In this paper, a methodology is developed to model and analyze the effect of undesired (ghost) reflections of Gaussian beams that are produced by anamorphic optical systems. The superposition of these beams with the nominal beam modulates the nominal power distribution at the recording plane. This modulation may cause contrast reduction, veiling parts of the nominal image, and/or the formation of spurious interference fringes. The developed methodology is based on synthesizing the beam optical paths into nominal and ghost optical beam paths. Similar to the nominal beam, we present the concept that each ghost beam is characterized by a beam size, wavefront radius of curvature, and Gouy phase in the paraxial regime. The nominal and ghost beams are sequentially traced through the system and formulas for estimating the electric field magnitude and phase of each ghost beam at the recording plane are presented. The effective electric field is the addition of the individual nominal and ghost electric fields. Formulas for estimating Gouy phase, the shape of the interference fringes, and the central interference order are introduced. As an application, the theory of the formation of the interference fringes by Michelson interferometer is presented. This theory takes into consideration the ghost reflections that are formed by the beam splitter. To illustrate the theory and to show its wide applicability, simulation examples that include a Mangin mirror, a Michelson interferometer, and a black box optical system are provided.

  5. Gaussian beam measurement for HIFI instrument: Herschel Space Observatory

    NASA Astrophysics Data System (ADS)

    Pantaleev, Miroslav G.; Ermisch, Karsten; Fredrixon, Mathias; Svensson, Magnus; Belitsky, Victor

    2004-09-01

    The Heterodyne Instrument (HIFI) is part of the ESA Herschel Space Observatory Project. The instrument is intended for high-resolution spectroscopy and has a frequency coverage from 480 to 1250 GHz band in five receiver bands and 1410 to 1910 GHz in two additional bands. HIFI is built based on a modular principle: the mixers together with their respective optics are integrated into Mixer Sub-Assemblies (MSA). Each frequency band has two MSAs allocated for horizontal and vertical polarization. In this paper, we present the work done on the design and construction of a Gaussian beam measurement range. One of the unique features of the developed method is a possibility to measure the beam parameters of the MSAs in the absolute coordinate system referred to the device under test. This along with other methods should allow integration of the entire HIFI with the best possible coupling of the antenna beam to the receivers and achieving ultimate performance in such a complicated optical system. The range houses the measured MSA, which is at 4 K ambient temperature, and a continuous wave source placed on a precise scanner entirely under vacuum. Developed triangulation system provides mechanical reference data on the MSA, in-situ, after the entire system is evacuated and the cooling is finished. We adopted a scalar measurement approach where the test source scans the receiver input beam and the mixer IF power is measured. The data collected from 3-4 planar scans are used to calculate the orientation and position of the optical axis. We present results from the first beam measurements for MSA HIFI bands 1 and 2 (480 and 640 GHz), the measurement system performance and accuracy analysis.

  6. Evolution of a Gaussian laser beam in warm collisional magnetoplasma

    NASA Astrophysics Data System (ADS)

    Jafari, M. J.; Jafari Milani, M. R.; Niknam, A. R.

    2016-07-01

    In this paper, the spatial evolution of an intense circularly polarized Gaussian laser beam propagated through a warm plasma is investigated, taking into account the ponderomotive force, Ohmic heating, external magnetic field, and collisional effects. Using the momentum transfer and energy equations, both modified electron temperature and electron density in plasma are obtained. By introducing the complex dielectric permittivity of warm magnetized plasma and using the complex eikonal function, coupled differential equations for beam width parameter are established and solved numerically. The effects of polarization state of laser and magnetic field on the laser spot size evolution are studied. It is observed that in case of the right-handed polarization, an increase in the value of external magnetic field causes an increase in the strength of the self-focusing, especially in the higher values, and consequently, the self-focusing occurs in shorter distance of propagation. Moreover, the results demonstrate the existence of laser intensity and electron temperature ranges where self-focusing can occur, while the beam diverges outside of these regions; meanwhile, in these intervals, there exists a turning point for each of intensity and temperature in which the self-focusing process has its strongest strength. Finally, it is found that the self-focusing effect can be enhanced by increasing the plasma frequency (plasma density).

  7. Statistic of a Gaussian beam from an arbitrary rough target in the single passage atmospheric turbulence

    NASA Astrophysics Data System (ADS)

    Xiang, NingJing; Wu, ZhenSen; Wang, MingJun

    2014-10-01

    The extended Huygens-Fresnel principle and Goodman model was utilized for target surface to derive the mutual coherence function (MCF) of a Gaussian beam reflected from an arbitrary rough target in atmospheric turbulence. According to the MCF, expressions of the mean irradiance and average speckle size at the receiver were obtained. The analysis indicated that the mean intensity is closely related to the ratio of root mean square (rms) height to the lateral correlation length. In addition, the speckle size at the receiver is associated with turbulence strength, propagation distance and roughness of the target. The results can be reduced to the result of a Gaussian beam illuminating rough target and scattering from a target in free space.

  8. Propagation properties of partially coherent four-petal Gaussian vortex beams in turbulent atmosphere

    NASA Astrophysics Data System (ADS)

    Liu, Dajun; Wang, Yaochuan; Yin, Hongming

    2016-04-01

    The partially coherent four-petal Gaussian vortex beam is introduced and described by analytical expressions. The analytical propagation equation for partially coherent four-petal Gaussian vortex beam in turbulent atmosphere is derived by using the extended Huygens-Fresnel diffraction integral formula. The influences of refraction index structure, beam order n, topological charge M and the coherence length on the average intensity distributions of beam are investigated by numerical examples.

  9. Stationary self-focusing of Gaussian laser beam in relativistic thermal quantum plasma

    SciTech Connect

    Patil, S. D.; Takale, M. V.

    2013-07-15

    In the present paper, we have employed the quantum dielectric response in thermal quantum plasma to model relativistic self-focusing of Gaussian laser beam in a plasma. We have presented an extensive parametric investigation of the dependence of beam-width parameter on distance of propagation in relativistic thermal quantum plasma. We have studied the role of Fermi temperature in the phenomenon of self-focusing. It is found that the quantum effects cause much higher oscillations of beam-width parameter and better relativistic focusing of laser beam in thermal quantum plasma in comparison with that in the relativistic cold quantum plasma and classical relativistic plasma. Our computations show more reliable results in comparison to the previous works.

  10. Determination of the beam centroid of an obstructed focused Gaussian laser beam

    SciTech Connect

    Doyle St John, W.

    2009-08-01

    Diffraction of an obstructed focused Gaussian laser beam has been treated theoretically using the Huygens-Fresnel diffraction integral and was found to be in good agreement with experimental measurements. The obstruction is a vertically oriented opaque cylinder treated as a flat hard aperture. Measurements and calculations are compared for the diffracted irradiance profile and the beam centroid as a function of cylinder diameter and lateral and longitudinal placement along the optic axis. The cylinders used were gauge pins and/or wires with diameters from 0.5 to 100 mil.

  11. Generation and propagation of a sine-azimuthal wavefront modulated Gaussian beam

    PubMed Central

    Lao, Guanming; Zhang, Zhaohui; Luo, Meilan; Zhao, Daomu

    2016-01-01

    We introduce a method for modulating the Gaussian beam by means of sine-azimuthal wavefront and carry out the experimental generation. The analytical propagation formula of such a beam passing through a paraxial ABCD optical system is derived, by which the intensity properties of the sine-azimuthal wavefront modulated Gaussian (SWMG) beam are examined both theoretically and experimentally. Both of the experimental and theoretical results show that the SWMG beam goes through the process from beam splitting to a Gaussian-like profile, which is closely determined by the phase factor and the propagation distance. Appropriate phase factor and short distance are helpful for the splitting of beam. However, in the cases of large phase factor and focal plane, the intensity distributions tend to take a Gaussian form. Such unique features may be of importance in particle trapping and medical applications. PMID:27443798

  12. Optical Gaussian beam interaction with one-dimensional thermal wave in the Raman-Nath configuration.

    PubMed

    Bukowski, Roman J

    2009-03-01

    Optical Gaussian beam interaction with a one-dimensional temperature field in the form of a thermal wave in the Raman-Nath configuration is analyzed. For the description of the Gaussian beam propagation through the nonstationary temperature field the complex geometric optics method was used. The influence of the refractive coefficient modulation by thermal wave on the complex ray phase, path, and amplitude was taken into account. It was assumed that for detection of the modulated Gaussian beam parameters two types of detector can be used: quadrant photodiodes or centroidal photodiodes. The influence of such parameters as the size and position of the Gaussian beam waist, the laser-screen (detector) distance, the thermal wave beam position and width, as well as thermal wave frequency and the distance between the probing optical beam axis and source of thermal waves on the so-called normal signal was taken into account.

  13. Propagation of flat-topped multi-Gaussian beams through a double-lens system with apertures.

    PubMed

    Gao, Yanqi; Zhu, Baoqiang; Liu, Daizhong; Lin, Zunqi

    2009-07-20

    A general model for different apertures and flat-topped laser beams based on the multi-Gaussian function is developed. The general analytical expression for the propagation of a flat-topped beam through a general double-lens system with apertures is derived using the above model. Then, the propagation characteristics of the flat-topped beam through a spatial filter are investigated by using a simplified analytical expression. Based on the Fluence beam contrast and the Fill factor, the influences of a pinhole size on the propagation of the flat-topped multi-Gaussian beam (FMGB) through the spatial filter are illustrated. An analytical expression for the propagation of the FMGB through the spatial filter with a misaligned pinhole is presented, and the influences of the pinhole offset are evaluated.

  14. Gaussian laser beam transformation into an optical vortex beam by helical lens

    NASA Astrophysics Data System (ADS)

    Janicijevic, Ljiljana; Topuzoski, Suzana

    2016-01-01

    In this article, we investigate the Fresnel diffraction characteristics of the hybrid optical element which is a combination of a spiral phase plate (SPP) with topological charge p and a thin lens with focal length f, named the helical lens (HL). As incident a Gaussian laser beam is treated, having its waist a distance ζ from the HL plane and its axis passing through the centre of the HL. It is shown that the SPP introduces a phase singularity of pth order to the incident beam, while the lens transforms the beam characteristic parameters. The output light beam is analyzed in detail: its characteristic parameters and focusing properties, amplitude and intensity distributions and the vortex rings profiles, and radii, at any z distance behind the HL plane, as well as in the near and far field.

  15. Speech Enhancement Using Gaussian Scale Mixture Models.

    PubMed

    Hao, Jiucang; Lee, Te-Won; Sejnowski, Terrence J

    2010-08-11

    This paper presents a novel probabilistic approach to speech enhancement. Instead of a deterministic logarithmic relationship, we assume a probabilistic relationship between the frequency coefficients and the log-spectra. The speech model in the log-spectral domain is a Gaussian mixture model (GMM). The frequency coefficients obey a zero-mean Gaussian whose covariance equals to the exponential of the log-spectra. This results in a Gaussian scale mixture model (GSMM) for the speech signal in the frequency domain, since the log-spectra can be regarded as scaling factors. The probabilistic relation between frequency coefficients and log-spectra allows these to be treated as two random variables, both to be estimated from the noisy signals. Expectation-maximization (EM) was used to train the GSMM and Bayesian inference was used to compute the posterior signal distribution. Because exact inference of this full probabilistic model is computationally intractable, we developed two approaches to enhance the efficiency: the Laplace method and a variational approximation. The proposed methods were applied to enhance speech corrupted by Gaussian noise and speech-shaped noise (SSN). For both approximations, signals reconstructed from the estimated frequency coefficients provided higher signal-to-noise ratio (SNR) and those reconstructed from the estimated log-spectra produced lower word recognition error rate because the log-spectra fit the inputs to the recognizer better. Our algorithms effectively reduced the SSN, which algorithms based on spectral analysis were not able to suppress.

  16. Hanle electromagnetically induced transparency and absorption resonances with a Laguerre Gaussian beam

    SciTech Connect

    Anupriya, J.; Ram, Nibedita; Pattabiraman, M.

    2010-04-15

    We describe a computational and experimental study on Hanle electromagnetically induced transparency and absorption resonance line shapes with a Laguerre Gaussian (LG) beam. It is seen that the LG beam profile brings about a significant narrowing in the line shape of the Hanle resonance and ground-state Zeeman coherence in comparison to a Gaussian beam. This narrowing is attributed to the azimuthal mode index of the LG field.

  17. Swings and roundabouts: optical Poincaré spheres for polarization and Gaussian beams

    NASA Astrophysics Data System (ADS)

    Dennis, M. R.; Alonso, M. A.

    2017-02-01

    The connection between Poincaré spheres for polarization and Gaussian beams is explored, focusing on the interpretation of elliptic polarization in terms of the isotropic two-dimensional harmonic oscillator in Hamiltonian mechanics, its canonical quantization and semiclassical interpretation. This leads to the interpretation of structured Gaussian modes, the Hermite-Gaussian, Laguerre-Gaussian and generalized Hermite-Laguerre-Gaussian modes as eigenfunctions of operators corresponding to the classical constants of motion of the two-dimensional oscillator, which acquire an extra significance as families of classical ellipses upon semiclassical quantization. This article is part of the themed issue 'Optical orbital angular momentum'.

  18. Terahertz radiation generation and shape control by interaction of array Gaussian laser beams with plasma

    NASA Astrophysics Data System (ADS)

    Bakhtiari, Farhad; Golmohammady, Shole; Yousefi, Masoud; Ghafary, Bijan

    2016-12-01

    In the present paper, a scheme for generation of terahertz (THz) radiation in electron-neutral collisional plasma based on beating of two Gaussian laser array beams has been proposed. It is shown that the efficiency of THz radiation based on the Gaussian laser array beams can be enhanced drastically in comparison with the efficiency of THz radiation based on the Gaussian one. Furthermore, the producing THz radiation by the Gaussian laser array beams, which has an exclusive field profile, is affected by some array structure parameters. It can also be used to overcome the negative consequences of electron neutral collisions in plasma, which may be occurring in the THz radiation generation process. Optimizing the collisional plasma, laser beams and array structure parameters, THz radiation efficiency up to 0.07% can be obtained in our scheme which is about three times greater than the maximum efficiency obtained for standard (single) Gaussian laser beam. Also, considering the electrostatic energy channel in solving the THz wave equation, and reduction of THz radiation efficiency to 0.054%, in this assumption, the ratio between the efficiency of Gaussian laser array beams and standard Gaussian laser beam remained unchanged.

  19. Propagation of a higher-order cosh-Gaussian beam in turbulent atmosphere.

    PubMed

    Zhou, Guoquan

    2011-02-28

    The propagation of a higher-order cosh-Gaussian beam through a paraxial and real ABCD optical system in turbulent atmosphere has been investigated. The analytical expressions for the average intensity, the effective beam size, and the kurtosis parameter of a higher-order cosh-Gaussian beam through a paraxial and real ABCD optical system are derived in turbulent atmosphere. The average intensity distribution and the spreading properties of a higher-order cosh-Gaussian in turbulent atmosphere are numerically demonstrated. The influences of the beam parameters and the structure constant of the atmospheric turbulence on the propagation of a higher-order cosh-Gaussian beam in turbulent atmosphere are also examined in detail.

  20. Propagation of a general multi-Gaussian beam in turbulent atmosphere in a slant path.

    PubMed

    Chu, Xiuxiang; Liu, Zejin; Wu, Yi

    2008-01-01

    The propagation of a multi-Gaussian beam in turbulent atmosphere in a slant path is studied. The analytical expression for the average intensity of a general multi-Gaussian beam is derived. As special cases the average intensities of a two- and a four-Gaussian beam are investigated and numerically calculated. The investigation reveals that at lower altitude and with large sigma the intensity distribution at the receiver plane can have a shape (multiple peaks) similar to that at the source plane. But with increase in altitude or decrease in sigma, the multiple peaks gradually disappear and evolve into the profile of a fundamental Gaussian beam. From the comparisons between the different propagations we can see that the beam spreading due to wavelength and initial waist width in a slant path is much slower than that in a horizontal path.

  1. ATOMIC AND MOLECULAR PHYSICS: A Novel Mirror for Cold Molecules with a Semi-Gaussian Beam

    NASA Astrophysics Data System (ADS)

    Yin, Ya-Ling; Zhou, Qi; Xia, Yong; Yin, Jian-Ping

    2008-09-01

    We propose a novel mirror for cold molecules with a blue-detuned semi-Gaussian beam and study the dynamic reflection process of cold molecules by Monte Carlo simulation. Our study shows that this mirror can realize a specular reflection of cold iodine molecular beam with a temperature of 30 mK by a reflectivity of 58.2% when the semi-Gaussian laser power is 1.0kW. When a semi-Gaussian CO2 laser beam with a power of 5.8 kW is used, the reflectivity of this mirror can reach about 100%.

  2. Self-focusing of a Gaussian electromagnetic beam in a complex plasma

    SciTech Connect

    Mishra, S. K.; Misra, Shikha; Sodha, M. S.

    2011-04-15

    This paper analyzes the propagation of a Gaussian electromagnetic beam in a complex plasma; the paraxial approach has been invoked for the study of the propagation characteristics. The analytical model emphasizes the open nature of complex plasmas and incorporates the charge, number density, and energy balance of the plasma constituents along with the plasma neutrality. Diffusion due to the density and temperature gradients, thermal conduction, Ohmic heating, and energy exchange in collisions/accretion have also been taken into account. For a numerical appreciation of the results, the critical curves for the propagation of the beam in dark plasmas have been discussed. The dependence of the beam width parameter on distance of propagation has been evaluated for three typical cases viz., of steady divergence, oscillatory divergence, and self-focusing. The equality of electron and ion density, an assumption inherent in the earlier analysis, has been discarded on account of the presence of charged dust particles.

  3. Intra-Beam and Touschek Scattering Computations for Beam with Non-Gaussian Longitudinal Distributions

    SciTech Connect

    Xiao, A.; Borland, M.

    2015-01-01

    Both intra-beamscattering (IBS) and the Touschek effect become prominent formulti-bend-achromat- (MBA-) based ultra-low-emittance storage rings. To mitigate the transverse emittance degradation and obtain a reasonably long beam lifetime, a higher harmonic rf cavity (HHC) is often proposed to lengthen the bunch. The use of such a cavity results in a non-gaussian longitudinal distribution. However, common methods for computing IBS and Touschek scattering assume Gaussian distributions. Modifications have been made to several simulation codes that are part of the elegant [1] toolkit to allow these computations for arbitrary longitudinal distributions. After describing thesemodifications, we review the results of detailed simulations for the proposed hybrid seven-bend-achromat (H7BA) upgrade lattice [2] for the Advanced Photon Source.

  4. Characterizing the beam steering and distortion of Gaussian and Bessel beams focused in tissues with microscopic heterogeneities.

    PubMed

    Chen, Ye; Liu, Jonathan T C

    2015-04-01

    Bessel beams have recently been investigated as a means of improving deep-tissue microscopy in highly scattering and heterogeneous media. It has been suggested that the long depth-of-field and self-reconstructing property of a Bessel beam enables an increased penetration depth of the focused beam in tissues compared to a conventional Gaussian beam. However, a study is needed to better quantify the magnitude of the beam steering as well as the distortion of focused Gaussian and Bessel beams in tissues with microscopic heterogeneities. Here, we have developed an imaging method and quantitative metrics to evaluate the motion and distortion of low-numerical-aperture (NA) Gaussian and Bessel beams focused in water, heterogeneous phantoms, and fresh mouse esophagus tissues. Our results indicate that low-NA Bessel beams exhibit reduced beam-steering artifacts and distortions compared to Gaussian beams, and are therefore potentially useful for microscopy applications in which pointing accuracy and beam quality are critical, such as dual-axis confocal (DAC) microscopy.

  5. Eulerian Gaussian beams for Schroedinger equations in the semi-classical regime

    SciTech Connect

    Leung, Shingyu Qian Jianliang

    2009-05-01

    We propose Gaussian-beam based Eulerian methods to compute semi-classical solutions of the Schroedinger equation. Traditional Gaussian beam type methods for the Schroedinger equation are based on the Lagrangian ray tracing. Based on the first Eulerian Gaussian beam framework proposed in Leung et al. [S. Leung, J. Qian, R. Burridge, Eulerian Gaussian beams for high frequency wave propagation, Geophysics 72 (2007) SM61-SM76], we develop a new Eulerian Gaussian beam method which uses global Cartesian coordinates, level-set based implicit representation and Liouville equations. The resulting method gives uniformly distributed phases and amplitudes in phase space simultaneously. To obtain semi-classical solutions to the Schroedinger equation with different initial wave functions, we only need to slightly modify the summation formula. This yields a very efficient method for computing semi-classical solutions to the Schroedinger equation. For instance, in the one-dimensional case the proposed algorithm requires only O(sNm{sup 2}) operations to compute s different solutions with s different initial wave functions under the influence of the same potential, where N=O(1/h),h is the Planck constant, and m<beams which depends on h weakly. Numerical experiments indicate that this Eulerian Gaussian beam approach yields accurate semi-classical solutions even at caustics.

  6. Gaussian versus flat-top spatial beam profiles for optical stimulation of the prostate nerves

    NASA Astrophysics Data System (ADS)

    Tozburun, Serhat; Lagoda, Gwen A.; Burnett, Arthur L.; Fried, Nathaniel M.

    2010-02-01

    The cavernous nerves (CN) course along the prostate surface and are responsible for erectile function. Improved identification and preservation of the CN's is critical to maintaining sexual potency after prostate cancer surgery. Noncontact optical nerve stimulation (ONS) of the CN's was recently demonstrated in a rat model, in vivo, as a potential alternative to electrical nerve stimulation (ENS) for identification of the CN's during prostate surgery. However, the therapeutic window for ONS is narrow, so optimal design of the fiber optic delivery system is critical for safe, reproducible stimulation. This study describes modeling, assembly, and testing of an ONS probe for delivering a small, collimated, flat-top laser beam for uniform CN stimulation. A direct comparison of the magnitude and response time of the intracavernosal pressure (ICP) for both Gaussian and flat-top spatial beam profiles was performed. Thulium fiber laser radiation (λ=1870 nm) was delivered through a 200-μm fiber, with distal fiber tip chemically etched to convert a Gaussian to flat-top beam profile. The laser beam was collimated to a 1-mm-diameter spot using an aspheric lens. Computer simulations of light propagation were used to optimize the probe design. The 10-Fr (3.4-mm-OD) laparoscopic probe provided a constant radiant exposure at the CN surface. The probe was tested in four rats, in vivo. ONS of the CN's was performed with a 1-mm-diameter spot, 5-ms pulse duration, and pulse rate of 20 Hz for a duration of 15-30 s. The flat-top laser beam profile consistently produced a faster and higher ICP response at a lower radiant exposure than the Gaussian beam profile due, in part, to easier alignment of the more uniform beam with nerve. The threshold for ONS was approximately 0.14 J/cm2, corresponding to a temperature increase of 6-8°C at the CN surface after a stimulation time of 15 s. With further development, ONS may be used as a diagnostic tool for identification of CN's during prostate

  7. Hermite-cosine-Gaussian laser beam and its propagation characteristics in turbulent atmosphere.

    PubMed

    Eyyuboğlu, Halil Tanyer

    2005-08-01

    Hermite-cosine-Gaussian (HcosG) laser beams are studied. The source plane intensity of the HcosG beam is introduced and its dependence on the source parameters is examined. By application of the Fresnel diffraction integral, the average receiver intensity of HcosG beam is formulated for the case of propagation in turbulent atmosphere. The average receiver intensity is seen to reduce appropriately to various special cases. When traveling in turbulence, the HcosG beam initially experiences the merging of neighboring beam lobes, and then a TEM-type cosh-Gaussian beam is formed, temporarily leading to a plain cosh-Gaussian beam. Eventually a pure Gaussian beam results. The numerical evaluation of the normalized beam size along the propagation axis at selected mode indices indicates that relative spreading of higher-order HcosG beam modes is less than that of the lower-order counterparts. Consequently, it is possible at some propagation distances to capture more power by using higher-mode-indexed HcosG beams.

  8. Gaussian beam propagation in anisotropic turbulence along horizontal links: theory, simulation, and laboratory implementation.

    PubMed

    Xiao, Xifeng; Voelz, David G; Toselli, Italo; Korotkova, Olga

    2016-05-20

    Experimental and theoretical work has shown that atmospheric turbulence can exhibit "non-Kolmogorov" behavior including anisotropy and modifications of the classically accepted spatial power spectral slope, -11/3. In typical horizontal scenarios, atmospheric anisotropy implies that the variations in the refractive index are more spatially correlated in both horizontal directions than in the vertical. In this work, we extend Gaussian beam theory for propagation through Kolmogorov turbulence to the case of anisotropic turbulence along the horizontal direction. We also study the effects of different spatial power spectral slopes on the beam propagation. A description is developed for the average beam intensity profile, and the results for a range of scenarios are demonstrated for the first time with a wave optics simulation and a spatial light modulator-based laboratory benchtop counterpart. The theoretical, simulation, and benchtop intensity profiles show good agreement and illustrate that an elliptically shaped beam profile can develop upon propagation. For stronger turbulent fluctuation regimes and larger anisotropies, the theory predicts a slightly more elliptical form of the beam than is generated by the simulation or benchtop setup. The theory also predicts that without an outer scale limit, the beam width becomes unbounded as the power spectral slope index α approaches a maximum value of 4. This behavior is not seen in the simulation or benchtop results because the numerical phase screens used for these studies do not model the unbounded wavefront tilt component implied in the analytic theory.

  9. A Fast Incremental Gaussian Mixture Model

    PubMed Central

    Pinto, Rafael Coimbra; Engel, Paulo Martins

    2015-01-01

    This work builds upon previous efforts in online incremental learning, namely the Incremental Gaussian Mixture Network (IGMN). The IGMN is capable of learning from data streams in a single-pass by improving its model after analyzing each data point and discarding it thereafter. Nevertheless, it suffers from the scalability point-of-view, due to its asymptotic time complexity of O(NKD3) for N data points, K Gaussian components and D dimensions, rendering it inadequate for high-dimensional data. In this work, we manage to reduce this complexity to O(NKD2) by deriving formulas for working directly with precision matrices instead of covariance matrices. The final result is a much faster and scalable algorithm which can be applied to high dimensional tasks. This is confirmed by applying the modified algorithm to high-dimensional classification datasets. PMID:26444880

  10. Generalised Hermite-Gaussian beams and mode transformations

    NASA Astrophysics Data System (ADS)

    Wang, Yi; Chen, Yujie; Zhang, Yanfeng; Chen, Hui; Yu, Siyuan

    2016-05-01

    Generalised Hermite-Gaussian modes (gHG modes), an extended notion of Hermite-Gaussian modes (HG modes), are formed by the summation of normal HG modes with a characteristic function α, which can be used to unite conventional HG modes and Laguerre-Gaussian modes (LG modes). An infinite number of normalised orthogonal modes can thus be obtained by modulation of the function α. The gHG mode notion provides a useful tool in analysis of the deformation and transformation phenomena occurring in propagation of HG and LG modes with astigmatic perturbation.

  11. 3-D Gaussian beam scattering from a gyromagnetic perforated layer: Quasi-static approach

    NASA Astrophysics Data System (ADS)

    Yachin, Vladimir V.; Zinenko, Tatiana L.

    2016-12-01

    This paper is devoted to the study of the scattering of a three-dimensional (3-D) Gaussian beam with the circular cross section from a double periodic perforated gyromagnetic layer with polarization independent unit-cell, in the quasi-static approximation. We used the plane-wave spectrum representation for Gaussian beam field representation and reduced it to a single integral representation. The phenomena of the lateral beam shift influenced by Faraday rotation and the nearly total beam transmission when passing through gyromagnetic slab biased with an external static magnetic field in the Faraday configuration were considered.

  12. Field and imaging properties of two orthogonally polarized Gaussian optical beams with a nonlinear parabolic graded-index rod lens

    NASA Astrophysics Data System (ADS)

    Li, Yucui

    1996-04-01

    The field and imaging formulas of two orthogonally polarized Gaussian light beams through a nonlinear parabolic graded-index rod lens are derived by use of a variational approach and the ABCD law of Gaussian beam propagation. The effects of power and position of one optical beam on the field and propagation and imaging properties of the other optical beam are analyzed.

  13. Average spreading and beam quality evolution of Gaussian array beams propagating through oceanic turbulence

    NASA Astrophysics Data System (ADS)

    Zhi, Dong; Chen, Yizhu; Tao, Rumao; Ma, Yanxing; Zhou, Pu; Si, Lei

    2015-11-01

    The propagation properties of a radial Gaussian beam array through oceanic turbulence are studied analytically. The analytical expressions for the average intensity and the beam quality (power-in-the-bucket (PIB) and M 2-factor) of a radial beam array in a turbulent ocean are derived based on an account of statistical optics methods, the extended Huygens-Fresnel principle, and the second order moments of the Wigner distribution function. The influences of w, ε, and χ T on the average intensity are investigated. The array divergence increases and the laser beam spreads as the salinity-induced dominant, ε decreased, and χ T increased. Further, the analytical expression of PIB and the M 2-factor in the target plane is obtained. The changes of PIB and the M 2-factor with three oceanic turbulence parameters indicate that the stronger turbulence with a larger w, smaller ε, and larger χ T results in the value of PIB decreasing, the value of the M 2-factor increasing, and the beam quality degrading.

  14. Propagation and self-healing ability of a Bessel-Gaussian beam modulated by Bessel gratings

    NASA Astrophysics Data System (ADS)

    Qiao, Chunhong; Feng, Xiaoxing; Chu, Xiuxiang

    2016-04-01

    A new type of Bessel-like beam which can be generated by using Bessel gratings to modulate the amplitude and phase of a Bessel beam is proposed. In analogy to study a Bessel beam in free space, the intensity evolution and self-healing property of the Bessel-like beam have been studied. Meanwhile, based on the Fresnel diffraction integral, the propagation of the Bessel-like beam in free space has also been investigated. Results show that the Bessel-like beam and the Bessel-Gaussian-like beams have some special and interesting properties.

  15. Bayesian electron density inference from JET lithium beam emission spectra using Gaussian processes

    NASA Astrophysics Data System (ADS)

    Kwak, Sehyun; Svensson, J.; Brix, M.; Ghim, Y.-C.; Contributors, JET

    2017-03-01

    A Bayesian model to infer edge electron density profiles is developed for the JET lithium beam emission spectroscopy (Li-BES) system, measuring Li I (2p-2s) line radiation using 26 channels with  ∼1 cm spatial resolution and 10∼ 20 ms temporal resolution. The density profile is modelled using a Gaussian process prior, and the uncertainty of the density profile is calculated by a Markov Chain Monte Carlo (MCMC) scheme. From the spectra measured by the transmission grating spectrometer, the Li I line intensities are extracted, and modelled as a function of the plasma density by a multi-state model which describes the relevant processes between neutral lithium beam atoms and plasma particles. The spectral model fully takes into account interference filter and instrument effects, that are separately estimated, again using Gaussian processes. The line intensities are inferred based on a spectral model consistent with the measured spectra within their uncertainties, which includes photon statistics and electronic noise. Our newly developed method to infer JET edge electron density profiles has the following advantages in comparison to the conventional method: (i) providing full posterior distributions of edge density profiles, including their associated uncertainties, (ii) the available radial range for density profiles is increased to the full observation range (∼26 cm), (iii) an assumption of monotonic electron density profile is not necessary, (iv) the absolute calibration factor of the diagnostic system is automatically estimated overcoming the limitation of the conventional technique and allowing us to infer the electron density profiles for all pulses without preprocessing the data or an additional boundary condition, and (v) since the full spectrum is modelled, the procedure of modulating the beam to measure the background signal is only necessary for the case of overlapping of the Li I line with impurity lines.

  16. Exact image method for Gaussian beam problems involving a planar interface

    NASA Technical Reports Server (NTRS)

    Lindell, I. V.

    1987-01-01

    Exact image method, recently introduced for the solution of electromagnetic field problems involving sources above a planar interface or two homogeneous media, is shown to be valid also for sources located in complex space, which makes its application possible for Gaussian beam analysis. It is demonstrated that the Goos-Hanchen shift and the angular shift of a TE polarized beam are correctly given as asymptotic results by the exact reflection image theory. Also, the apparent image location giving the correct Gaussian beam transmitted through the interface is obtained as another asymptotic check. The present theory makes it possible to calculate the exact coupling from the Gaussian beam to the reflected and refracted beams, as well as to the surface wave.

  17. Propagation dynamics of super-Gaussian beams in fractional Schrödinger equation: from linear to nonlinear regimes.

    PubMed

    Zhang, Lifu; Li, Chuxin; Zhong, Haizhe; Xu, Changwen; Lei, Dajun; Li, Ying; Fan, Dianyuan

    2016-06-27

    We have investigated the propagation dynamics of super-Gaussian optical beams in fractional Schrödinger equation. We have identified the difference between the propagation dynamics of super-Gaussian beams and that of Gaussian beams. We show that, the linear propagation dynamics of the super-Gaussian beams with order m > 1 undergo an initial compression phase before they split into two sub-beams. The sub-beams with saddle shape separate each other and their interval increases linearly with propagation distance. In the nonlinear regime, the super-Gaussian beams evolve to become a single soliton, breathing soliton or soliton pair depending on the order of super-Gaussian beams, nonlinearity, as well as the Lévy index. In two dimensions, the linear evolution of super-Gaussian beams is similar to that for one dimension case, but the initial compression of the input super-Gaussian beams and the diffraction of the splitting beams are much stronger than that for one dimension case. While the nonlinear propagation of the super-Gaussian beams becomes much more unstable compared with that for the case of one dimension. Our results show the nonlinear effects can be tuned by varying the Lévy index in the fractional Schrödinger equation for a fixed input power.

  18. Cylindrical light pipes for collecting light scattered from a Gaussian beam

    NASA Astrophysics Data System (ADS)

    Hopkins, George W.; Simons, Tad D.

    1999-10-01

    An investigation to enhance the efficiency of Raman- scattered light showed that cylindrical light pipes can significantly increase light collection from a Gaussian beam. Further, the enhanced signal from the light pipe retains the image of the laser beam, permitting the use of smaller detectors and resulting in a favorable signal-to- noise ratios. This investigation focussed on real-time measurements of gaseous media in a laser buildup cavity; however, the imaging properties of the light pipe apply to all measurements of molecular scattering. The light pipe matched the constraints of our measurement system: spectral separation and detection with an optical spectrograph, the need to reduce background light, the need to minimize cost, and stimulation by a laser beam in an optical cavity. After initial experiments collecting light from the ends of light pipes, we developed light pipes with a window on the cylindrical surface. Light emitted from these windows is much more intense than the direct image of the laser beam (typically 10X for light pipes 50 - 100 mm long), and the signal retains the image of the beam. Computer ray tracing modeled this side collection using Monte Carlo techniques, which are discussed in detail. We fabricated and tested light pipes using several different coatings.

  19. Device and method for creating Gaussian aberration-corrected electron beams

    SciTech Connect

    McMorran, Benjamin; Linck, Martin

    2016-01-19

    Electron beam phase gratings have phase profiles that produce a diffracted beam having a Gaussian or other selected intensity profile. Phase profiles can also be selected to correct or compensate electron lens aberrations. Typically, a low diffraction order produces a suitable phase profile, and other orders are discarded.

  20. Novel theory for propagation of tilted Gaussian beam through aligned optical system

    NASA Astrophysics Data System (ADS)

    Xia, Lei; Gao, Yunguo; Han, Xudong

    2017-03-01

    A novel theory for tilted beam propagation is established in this paper. By setting the propagation direction of the tilted beam as the new optical axis, we establish a virtual optical system that is aligned with the new optical axis. Within the first order approximation of the tilt and off-axis, the propagation of the tilted beam is studied in the virtual system instead of the actual system. To achieve more accurate optical field distributions of tilted Gaussian beams, a complete diffraction integral for a misaligned optical system is derived by using the matrix theory with angular momentums. The theory demonstrates that a tilted TEM00 Gaussian beam passing through an aligned optical element transforms into a decentered Gaussian beam along the propagation direction. The deviations between the peak intensity axis of the decentered Gaussian beam and the new optical axis have linear relationships with the misalignments in the virtual system. ZEMAX simulation of a tilted beam through a thick lens exposed to air shows that the errors between the simulation results and theoretical calculations of the position deviations are less than 2‰ when the misalignments εx, εy, εx', εy' are in the range of [-0.5, 0.5] mm and [-0.5, 0.5]°.

  1. Second-harmonic generation excited by a rotating Laguerre-Gaussian beam

    SciTech Connect

    Petrov, Dmitri

    2010-09-15

    Experimental data demonstrate that unlike linear optical processes, an optical Laguerre-Gaussian beam of frequency {omega}, with topological charge m, rotating with angular frequency {Omega}<<{omega}, may not be considered as a monochromatic beam with the shifted frequency {omega}+m{Omega} (Doppler angular shift) for the second-harmonic generation nonlinear process.

  2. Effect of turbulent atmosphere on the on-axis average intensity of Pearcey-Gaussian beam

    NASA Astrophysics Data System (ADS)

    F, Boufalah; L, Dalil-Essakali; H, Nebdi; A, Belafhal

    2016-06-01

    The propagation characteristics of the Pearcey-Gaussian (PG) beam in turbulent atmosphere are investigated in this paper. The Pearcey beam is a new kind of paraxial beam, based on the Pearcey function of catastrophe theory, which describes diffraction about a cusp caustic. By using the extended Huygens-Fresnel integral formula in the paraxial approximation and the Rytov theory, an analytical expression of axial intensity for the considered beam family is derived. Some numerical results for PG beam propagating in atmospheric turbulence are given by studying the influences of some factors, including incident beam parameters and turbulence strengths.

  3. Implementation of a Gaussian Beam Laser and Aspheric Optics for High Spatial Resolution MALDI Imaging MS

    PubMed Central

    Zavalin, Andre; Yang, Junhai; Haase, Andreas; Holle, Armin; Caprioli, Richard

    2014-01-01

    We have investigated the use of a Gaussian beam laser for MALDI Imaging Mass Spectrometry to provide a precisely defined laser spot of 5 µm diameter on target using a commercial MALDI TOF instrument originally designed to produce a 20 µm diameter laser beam spot at its smallest setting. A Gaussian beam laser was installed in the instrument in combination with an aspheric focusing lens. This ion source produced sharp ion images at 5 µm spatial resolution with signals of high intensity as shown for images from thin tissue sections of mouse brain. PMID:24692046

  4. Focusing properties of radially polarized modified Bessel-modulated Gaussian beam by a high numerical aperture objective

    NASA Astrophysics Data System (ADS)

    El Halba, E. M.; Boustimi, M.; Ez-zariy, L.; Belafhal, A.

    2017-02-01

    In this paper, the focusing properties of radially polarized modified Bessel-modulated Gaussian (RPMQBG) beam with quadratic radial dependence through a high numerical aperture (NA) lens are investigated, theoretically and numerically, using the vector diffraction theory model. The tight focusing properties are studied in great detail. The numerical simulation results show that the intensity distribution of the RPMQBG beam at the focal region of the numerical aperture can be changed considerably by the variation of the optical vortex beam topological charge l and by the high numerical aperture angle (NA).

  5. Fraunhofer diffraction of Laguerre-Gaussian laser beam by helical axicon

    NASA Astrophysics Data System (ADS)

    Topuzoski, S.

    2014-11-01

    In this article we present a theoretical study for Fraunhofer diffraction of a Laguerre-Gaussian laser beam with “0” radial mode number and “l” azimuthal mode number (LG0l) by helical axicon. Analytical expressions describing the diffracted wave field amplitude and intensity distributions in the back focal plane of a convergent lens are derived in a form of product of a Gauss-doughnut function and a sum of hypergeometric Kummer functions. Also, the diffracted LG beam by axicon only, as well as by spiral phase plate only, and the diffracted Gaussian beam by helical axicon, are described mathematically in the back focal plane of a convergent lens. Different possibilities for obtaining output vortex beam with reduced or increased topological charge compared to that of the incident beam, or for obtaining chargeless beam are analyzed.

  6. Goos-Hänchen and Imbert-Fedorov shifts for astigmatic Gaussian beams

    NASA Astrophysics Data System (ADS)

    Ornigotti, Marco; Aiello, Andrea

    2015-06-01

    In this work we investigate the role of the beam astigmatism in the Goos-Hänchen and Imbert-Fedorov shift. As a case study, we consider a Gaussian beam focused by an astigmatic lens and we calculate explicitly the corrections to the standard formulas for beam shifts due to the astigmatism induced by the lens. Our results show that the different focusing in the longitudinal and transverse direction introduced by an astigmatic lens may enhance the angular part of the shift.

  7. Direct evidence for three-dimensional off-axis trapping with single Laguerre-Gaussian beam

    PubMed Central

    Otsu, T.; Ando, T.; Takiguchi, Y.; Ohtake, Y.; Toyoda, H.; Itoh, H.

    2014-01-01

    Optical tweezers are often applied to control the dynamics of objects by scanning light. However, there is a limitation that objects fail to track the scan when the drag exceeds the trapping force. In contrast, Laguerre-Gaussian (LG) beams can directly control the torque on objects and provide a typical model for nonequilibrium systems such as Brownian motion under external fields. Although stable “mid-water” trapping is essential for removing extrinsic hydrodynamic effects in such studies, three-dimensional trapping by LG beams has not yet been clearly established. Here we report the three-dimensional off-axis trapping of dielectric spheres using high-quality LG beams generated by a special holographic method. The trapping position was estimated as ~ half the wavelength behind the beam waist. These results establish the scientific groundwork of LG trapping and the technical basis of calibrating optical torque to provide powerful tools for studying energy-conversion mechanisms and the nonequilibrium nature of biological molecules under torque. PMID:24694781

  8. Superresolution along extended depth of focus with binary-phase filters for the Gaussian beam.

    PubMed

    Liu, Linbo; Diaz, Frédéric; Wang, Liang; Loiseaux, Brigitte; Huignard, Jean-Pierre; Sheppard, C J R; Chen, Nanguang

    2008-08-01

    In the paraxial Debye regime, simple and power-efficient pupil filters are designed to break the diffraction limit along a large depth of focus (DOF) for the Gaussian beam. Dependences of the superresolution factor, DOF gain, Strehl ratio, sidelobe strength, and axial intensity nonuniformity on the Gaussian profile in the pupil plane are characterized using the numerical method. Optimal filter designs are proposed for either high-resolution or ultra-large-DOF applications followed by experimental verifications.

  9. Connections between Graphical Gaussian Models and Factor Analysis

    ERIC Educational Resources Information Center

    Salgueiro, M. Fatima; Smith, Peter W. F.; McDonald, John W.

    2010-01-01

    Connections between graphical Gaussian models and classical single-factor models are obtained by parameterizing the single-factor model as a graphical Gaussian model. Models are represented by independence graphs, and associations between each manifest variable and the latent factor are measured by factor partial correlations. Power calculations…

  10. Propagation properties of partially coherent four-petal Gaussian vortex beams in oceanic turbulence

    NASA Astrophysics Data System (ADS)

    Liu, Dajun; Wang, Yaochuan; Wang, Guiqiu; Luo, Xixian; Yin, Hongming

    2017-01-01

    Based on the extended Huygens-Fresnel principle, the analytical expressions for partially coherent four-petal Gaussian vortex beams propagating in oceanic turbulence are obtained, and the influence of the coherence length, beam order N, topological charge M and oceanic turbulence parameters on the evolution properties of beams are discussed in detail using numerical examples. The results show that the beam will evolve into a Gauss-like beam rapidly with decreasing coherence length σ and oceanic parameters \\varsigma and \\varepsilon , or increasing oceanic parameter {χ\\text{T}} in the far field due to the influence of the coherence length and oceanic turbulence.

  11. Interaction of Airy-Gaussian beams in saturable media

    NASA Astrophysics Data System (ADS)

    Zhou, Meiling; Peng, Yulian; Chen, Chidao; Chen, Bo; Peng, Xi; Deng, Dongmei

    2016-08-01

    Based on the nonlinear Schrödinger equation, the interactions of the two Airy-Gaussian components in the incidence are analyzed in saturable media, under the circumstances of the same amplitude and different amplitudes, respectively. It is found that the interaction can be both attractive and repulsive depending on the relative phase. The smaller the interval between two Airy-Gaussian components in the incidence is, the stronger the intensity of the interaction. However, with the equal amplitude, the symmetry is shown and the change of quasi-breathers is opposite in the in-phase case and out-of-phase case. As the distribution factor is increased, the phenomena of the quasi-breather and the self-accelerating of the two Airy-Gaussian components are weakened. When the amplitude is not equal, the image does not have symmetry. The obvious phenomenon of the interaction always arises on the side of larger input power in the incidence. The maximum intensity image is also simulated. Many of the characteristics which are contained within other images can also be concluded in this figure. Project supported by the National Natural Science Foundation of China (Grant Nos. 11374108 and 10904041), the Foundation for the Author of Guangdong Province Excellent Doctoral Dissertation (Grant No. SYBZZXM201227), and the Foundation of Cultivating Outstanding Young Scholars (“Thousand, Hundred, Ten” Program) of Guangdong Province, China. CAS Key Laboratory of Geospace Environment, University of Science and Technology of China.

  12. Scattering of a Gaussian beam by a large perfectly conducting cylinder with application to optical sensors

    NASA Astrophysics Data System (ADS)

    Gardner, Judd Steven

    1999-10-01

    Optical proximity sensing is often used in industry and the commercial realm to provide a system with information it may use in some decision making process. The applications for optical proximity sensing have changed and expanded over the years, and has presented a continually increased demand for higher accuracy. In order to satisfy this demand, new optical techniques have been established which have provided more precise proximity data than ever before, e.g. Atomic Force Microscopy and Photothermal Detection. To accommodate the increase in sensing precision, the precision of the mathematical models used to predict the behavior of the optical scheme must also increase. The particular interest pursued in this dissertation involves the detection of the change in the position of a beam due to some phenomena, e.g. Photothermal Deflection or Atomic Force Microscopy. The deflection of the beam in these cases may be on the order of microradians, and too small to detect with ordinary means. To remedy this, a reflecting cylinder is strategically positioned to reflect the incident deflected beam and, by the cylinder geometry, the reflected beam from the cylinder shows an increased deflection angle compared to the incident beam. If the optical scheme has been designed successfully, the resulting deflection of the reflected beam will be large enough to be detected by a sensor. In order to predict the optical behavior of an incident deflected beam reflected from a cylinder, three mathematical methods, Geometrical Optics, Physical Optics, and an Exact Formulation rigorously based on Maxwell's equations are employed. From these methods, a Geometrical Optics solution, two Physical Optics solutions, and an Exact solution are obtained and compared to demonstrate the accuracy of these mathematical models to predict the electric field behavior of a beam reflected from a cylinder. In all cases a Gaussian, well focused beam is used. The near, transitional, and far zones are considered

  13. Propagation of ring Airy Gaussian beams with optical vortices through anisotropic non-Kolmogorov turbulence

    NASA Astrophysics Data System (ADS)

    Zhi, Dong; Tao, Rumao; Zhou, Pu; Ma, Yanxing; Wu, Wuming; Wang, Xiaolin; Si, Lei

    2017-03-01

    A new ring Airy Gaussian (RAiG) vortex beam generation method by coherent combination of Gaussian beam array has been proposed. To validate the feasibility of this method, the propagation properties of the RAiG vortex beam and the coherent combining beam in vacuum have been studied and analyzed. From the comparisons of the intensity distributions and phase patterns along the propagation path, we can conclude that the coherent combining beam has the same properties as those of the ideal RAiG vortex beam. So this method can be used to obtain RAiG vortex beam in practice. Then the general analytical expression of the root-mean-square (RMS) beam width of the RAiG vortex beam, which is appropriately generated by coherent combining method, through anisotropic non-Kolmogorov turbulence has been derived. The influence of anisotropic turbulence on RMS beam width of the generated RAiG vortex beam has been numerically calculated. This generation method has good appropriation to the ideal RAiG vortex beam and is very useful for deriving the analytical expression of propagation properties through a random media. The conclusions are useful in practical applications, such as laser communication and remote sensing systems.

  14. Generation of Laguerre Gaussian beams using spiral phase diffractive elements fabricated on optical fiber tips using focused ion beam milling

    NASA Astrophysics Data System (ADS)

    Rodrigues Ribeiro, R. S.; Dahal, P.; Guerreiro, A.; Jorge, P. A. S.; Viegas, J.

    2016-03-01

    In this work, spiral phase lenses fabricated on the tip of single mode optical fibers are reported. This allows tailoring the fundamental guided mode, a Gaussian beam, into a Laguerre - Gaussian profile without using additional optical elements. The lenses are fabricated using Focused Ion Beam milling, enabling high resolution in the manufacturing process. The phase profiles are evaluated and validated using an implementation of the Finite Differences Time Domain. The output optical intensity profiles matching the numerical simulations are presented and analyzed. Finally, results on cell trapping and manipulation are briefly described.

  15. Hollow Gaussian beam generation through nonlinear interaction of photons with orbital angular momentum

    NASA Astrophysics Data System (ADS)

    Chaitanya, N. Apurv; Jabir, M. V.; Banerji, J.; Samanta, G. K.

    2016-09-01

    Hollow Gaussian beams (HGB) are a special class of doughnut shaped beams that do not carry orbital angular momentum (OAM). Such beams have a wide range of applications in many fields including atomic optics, bio-photonics, atmospheric science, and plasma physics. Till date, these beams have been generated using linear optical elements. Here, we show a new way of generating HGBs by three-wave mixing in a nonlinear crystal. Based on nonlinear interaction of photons having OAM and conservation of OAM in nonlinear processes, we experimentally generated ultrafast HGBs of order as high as 6 and power >180 mW at 355 nm. This generic concept can be extended to any wavelength, timescales (continuous-wave and ultrafast) and any orders. We show that the removal of azimuthal phase of vortices does not produce Gaussian beam. We also propose a new and only method to characterize the order of the HGBs.

  16. Hollow Gaussian beam generation through nonlinear interaction of photons with orbital angular momentum

    PubMed Central

    Chaitanya, N. Apurv; Jabir, M. V.; Banerji, J.; Samanta, G. K.

    2016-01-01

    Hollow Gaussian beams (HGB) are a special class of doughnut shaped beams that do not carry orbital angular momentum (OAM). Such beams have a wide range of applications in many fields including atomic optics, bio-photonics, atmospheric science, and plasma physics. Till date, these beams have been generated using linear optical elements. Here, we show a new way of generating HGBs by three-wave mixing in a nonlinear crystal. Based on nonlinear interaction of photons having OAM and conservation of OAM in nonlinear processes, we experimentally generated ultrafast HGBs of order as high as 6 and power >180 mW at 355 nm. This generic concept can be extended to any wavelength, timescales (continuous-wave and ultrafast) and any orders. We show that the removal of azimuthal phase of vortices does not produce Gaussian beam. We also propose a new and only method to characterize the order of the HGBs. PMID:27581625

  17. NGMIX: Gaussian mixture models for 2D images

    NASA Astrophysics Data System (ADS)

    Sheldon, Erin

    2015-08-01

    NGMIX implements Gaussian mixture models for 2D images. Both the PSF profile and the galaxy are modeled using mixtures of Gaussians. Convolutions are thus performed analytically, resulting in fast model generation as compared to methods that perform the convolution in Fourier space. For the galaxy model, NGMIX supports exponential disks and de Vaucouleurs and Sérsic profiles; these are implemented approximately as a sum of Gaussians using the fits from Hogg & Lang (2013). Additionally, any number of Gaussians can be fit, either completely free or constrained to be cocentric and co-elliptical.

  18. Chirped Airy-Gaussian beam in a medium with a parabolic potential

    NASA Astrophysics Data System (ADS)

    Zhang, Liping; Deng, Fu; Peng, Yulian; Chen, Bo; Peng, Xi; Li, Dongdong; Deng, Dongmei

    2017-01-01

    By solving the normalized dimensionless linear parabolic (Schrödinger-like) equations in the paraxial approximation, we can obtain the analytic solutions of the chirped Airy-Gaussian (CAiG) beam in a medium with a parabolic potential. We study the propagation properties of the finite energy CAiG beam in a parabolic potential and the influence of the distribution factor and the chirped factor on the CAiG beam. The propagation of the CAiG beam changes drastically with the distribution factor increasing: the CAiG beam tends to the chirped Airy beam when the distribution factor is very small; while as the distribution factor increases further, the CAiG beam tends to the chirped Gaussian beam. At the same time, the CAiG beam with a chirp has big changes when the chirped factor is increasing: the multi-peak structure is not obvious, the accelerated velocity and the peak intensity are larger, but the period does not change; when the CAiG beam has a quadratic chirp, the maximum intensity of the CAiG beam becomes smaller and the envelope is gradually smoother with the increasing of the chirped factor.

  19. Gaussian beam incident on the one-dimensional diffraction gratings with the high-K metal gate stack structures.

    PubMed

    Kuo, Hung-Fei; Frederick

    2014-04-01

    Optical scatterometry has attracted extensive interest in extracting the geometric shape information of nanolithography patterns because of the trend of shrinking device size and complicated stack structure. RCWA is the numerical algorithm implemented in the current scatterometry tool to calculate the diffraction efficiency. However, the known weakness for the RCWA method is the analysis of metallic gratings illuminated by the TM wave. This research applies the FDTD method using the Gaussian beam excitation source to analyze the diffraction efficiency of HKMG gratings for the use in the optical scatterometry and verifies the numerical diffraction efficiency discrepancy between the Gaussian beam and plane wave excitation methods. The numerical study is carried out with the line/space nanolithography patterns on the HKMG process stacks at 45 nm node technology. The nanolithography patterns are modeled as 1-D surface relief gratings. The 0th order diffraction efficiency is analyzed as a function of CDs, SWAs, incident angles and pitches of the gratings. The study presents the impact of the polarizations of the incident waves on the diffraction efficiency. In addition, this research investigates the phase of the 0th diffraction order as a function of the SWAs and illustrates the corresponding SWA parameter effect on the phase distribution. This research suggests the minimum beam radius to converge the numerical diffraction efficiency using Gaussian beam excitation to it using the plan wave.

  20. Acoustic radiation force on a double-layer microsphere by a Gaussian focused beam

    SciTech Connect

    Wu, Rongrong; Cheng, Kaixuan; Liu, Jiehui; Mao, Yiwei; Gong, Xiufen; Liu, Xiaozhou

    2014-10-14

    A new model for calculating the radiation force on double-layer microsphere is proposed based on the ray acoustics approach. The axial acoustic radiation force resulting from a focused Gaussian beam incident on spherical shells immersed in water is examined theoretically in relation to its thickness and the contents of its double-layer. The attenuation both in the water and inside the sphere is considered in this method, which cannot be ignored while the high frequency ultrasonic is used. Results of numerical calculations are presented for fat and low density polyethylene materials, with the hollow region filled with animal oil, water, or air. These results show how the acoustic impedance and the sound velocity of both layers, together with the thickness of the shell, affect the acoustic radiation force.

  1. Experimental Profiling of a Non-truncated Focused Gaussian Beam and Fine-tuning of the Quadratic Phase in the Fresnel Gaussian Shape Invariant

    SciTech Connect

    S., Juan Manuel Franco; Cywiak, Moises; Cywiak, David; Mourad, Idir

    2015-06-24

    A homodyne profiler is used for recording the intensity distribution of focused non-truncated Gaussian beams. The spatial distributions are obtained at planes in the vicinity of the back-focal plane of a focusing lens placed at different distances from a He–Ne laser beam with a Gaussian intensity profile. Comparisons of the experimental data with those obtained from the analytical equations for an ideal focusing lens allow us to propose formulae to fine-tune the quadratic term in the Fresnel Gaussian shape invariant at each interface of the propagated field. Furthermore, we give analytical expressions to calculate adequately the propagation of the field through an optical system.

  2. Gaussian-Schell analysis of the transverse spatial properties of high-harmonic beams

    PubMed Central

    Lloyd, David T.; O’Keeffe, Kevin; Anderson, Patrick N.; Hooker, Simon M.

    2016-01-01

    High harmonic generation (HHG) is an established means of producing coherent, short wavelength, ultrafast pulses from a compact set-up. Table-top high-harmonic sources are increasingly being used to image physical and biological systems using emerging techniques such as coherent diffraction imaging and ptychography. These novel imaging methods require coherent illumination, and it is therefore important to both characterize the spatial coherence of high-harmonic beams and understand the processes which limit this property. Here we investigate the near- and far-field spatial properties of high-harmonic radiation generated in a gas cell. The variation with harmonic order of the intensity profile, wavefront curvature, and complex coherence factor is measured in the far-field by the SCIMITAR technique. Using the Gaussian-Schell model, the properties of the harmonic beam in the plane of generation are deduced. Our results show that the order-dependence of the harmonic spatial coherence is consistent with partial coherence induced by both variation of the intensity-dependent dipole phase as well as finite spatial coherence of the driving radiation. These findings are used to suggest ways in which the coherence of harmonic beams could be increased further, which would have direct benefits to imaging with high-harmonic radiation. PMID:27465654

  3. Gaussian-Schell analysis of the transverse spatial properties of high-harmonic beams.

    PubMed

    Lloyd, David T; O'Keeffe, Kevin; Anderson, Patrick N; Hooker, Simon M

    2016-07-28

    High harmonic generation (HHG) is an established means of producing coherent, short wavelength, ultrafast pulses from a compact set-up. Table-top high-harmonic sources are increasingly being used to image physical and biological systems using emerging techniques such as coherent diffraction imaging and ptychography. These novel imaging methods require coherent illumination, and it is therefore important to both characterize the spatial coherence of high-harmonic beams and understand the processes which limit this property. Here we investigate the near- and far-field spatial properties of high-harmonic radiation generated in a gas cell. The variation with harmonic order of the intensity profile, wavefront curvature, and complex coherence factor is measured in the far-field by the SCIMITAR technique. Using the Gaussian-Schell model, the properties of the harmonic beam in the plane of generation are deduced. Our results show that the order-dependence of the harmonic spatial coherence is consistent with partial coherence induced by both variation of the intensity-dependent dipole phase as well as finite spatial coherence of the driving radiation. These findings are used to suggest ways in which the coherence of harmonic beams could be increased further, which would have direct benefits to imaging with high-harmonic radiation.

  4. Nonlinear derating of high-intensity focused ultrasound beams using Gaussian modal sums.

    PubMed

    Dibaji, Seyed Ahmad Reza; Banerjee, Rupak K; Soneson, Joshua E; Myers, Matthew R

    2013-11-01

    A method is introduced for using measurements made in water of the nonlinear acoustic pressure field produced by a high-intensity focused ultrasound transducer to compute the acoustic pressure and temperature rise in a tissue medium. The acoustic pressure harmonics generated by nonlinear propagation are represented as a sum of modes having a Gaussian functional dependence in the radial direction. While the method is derived in the context of Gaussian beams, final results are applicable to general transducer profiles. The focal acoustic pressure is obtained by solving an evolution equation in the axial variable. The nonlinear term in the evolution equation for tissue is modeled using modal amplitudes measured in water and suitably reduced using a combination of "source derating" (experiments in water performed at a lower source acoustic pressure than in tissue) and "endpoint derating" (amplitudes reduced at the target location). Numerical experiments showed that, with proper combinations of source derating and endpoint derating, direct simulations of acoustic pressure and temperature in tissue could be reproduced by derating within 5% error. Advantages of the derating approach presented include applicability over a wide range of gains, ease of computation (a single numerical quadrature is required), and readily obtained temperature estimates from the water measurements.

  5. Cylindrical particle manipulation and negative spinning using a nonparaxial Hermite-Gaussian light-sheet beam

    NASA Astrophysics Data System (ADS)

    Mitri, F. G.

    2016-10-01

    Based on the angular spectrum decomposition method (ASDM), a nonparaxial solution for the Hermite-Gaussian (HG m ) light-sheet beam of any order m is derived. The beam-shape coefficients (BSCs) are expressed in a compact form and computed using the standard Simpson’s rule for numerical integration. Subsequently, the analysis is extended to evaluate the longitudinal and transverse radiation forces as well as the spin torque on an absorptive dielectric cylindrical particle in 2D without any restriction to a specific range of frequencies. The dynamics of the cylindrical particle are also examined based on Newton’s second law of motion. The numerical results show that a Rayleigh or Mie cylindrical particle can be trapped, pulled or propelled in the optical field depending on its initial position in the cross-sectional plane of the HG m light-sheet. Moreover, negative or positive axial spin torques can arise depending on the choice of the non-dimensional size parameter ka (where k is the wavenumber and a is the radius of the cylinder) and the location of the absorptive cylinder in the beam. This means that the HG m light-sheet beam can induce clockwise or anti-clockwise rotations depending on its shift from the center of the cylinder. In addition, individual vortex behavior can arise in the cross-sectional plane of wave propagation. The present analysis presents an analytical model to predict the optical radiation forces and torque induced by a HG m light-sheet beam on an absorptive cylinder for applications in optical light-sheet tweezers, optical micro-machines, particle manipulation and opto-fluidics to name a few areas of research.

  6. Rayleigh scattering of a Gaussian laser beam from expanding clusters

    SciTech Connect

    Kumar, Manoj; Tripathi, V. K.

    2009-12-15

    Rayleigh scattering of an intense laser with Gaussian temporal and radial profiles from clustered gases is examined. The laser quickly converts the clusters into plasma balls with electron cloud of each ball executing large excursions about the ion sphere. The laser also heats the electrons. As the clusters expand under hydrodynamic pressure, plasma frequency of the cluster electrons omega{sub pe} decreases. The temporal rate of decrease in omega{sub pe} is maximum on laser axis and falls off with r. As the electron density of a cluster approaches plasma resonance, omega{sub pe}=omegasq root(3) (where omega is the frequency of the laser) the oscillatory electron cloud of the cluster produces resonantly enhanced Rayleigh scattering. This resonant enhancement first occurs in clusters on laser axis and afterward in farther clusters. The diffraction divergence of the laser limits the length of the cluster plasma, hence the Rayleigh scattering.

  7. Terahertz generation by mixing of two super-Gaussian laser beams in collisional plasma

    SciTech Connect

    Singh, Divya; Malik, Hitendra K. E-mail: hkmalik@physics.iitd.ac.in

    2014-08-15

    Considering a realistic situation, where electron-neutral collisions persist in plasma, analytical calculations are carried out for the Terahertz (THz) radiation generation by beating of two Super-Gaussian (SG) lasers of index p. The competency of these lasers over Gaussian lasers is discussed in detail with respect to the effects of collision and beam width on the THz field amplitude and efficiency of the mechanism. A critical transverse distance of the peak of the THz field is defined that shows a dependence on the index of SG lasers. Although electron-neutral collisions and larger beam width lead to the drastic reduction in the THz field when the SG lasers are used in the plasma, the efficiency of the mechanism remains much larger than the case of Gaussian lasers. Moreover, the higher index SG lasers produce stronger and focused THz radiation.

  8. Transformations of Gaussian Light Beams Caused by Reflection in FEL (free Electron Lasers) Resonators

    DTIC Science & Technology

    1988-10-27

    il FILE COPy Naval Research Laboratory Washingon, DC 20375-500 NRL Memorandum Report 6347 ,qJ. o Transformations of Gaussian Light Beams N Caused by...Transformations of 7aussian Light Beams Caused by Reflection in FEL Resonators 12 PERSONAL AUTHOR(S) Riyopoulos,* S., Tang, C.M. and Sprangle, P...34 𔃾-6603 -"I, -,’ SECURITY CLASSIFICATION OF THIS PAGE 19. ABSTRACTS (Continued) cross-coupling among vector components of the radiation field, caused

  9. On the reconstruction of parameters of quasi-Gaussian pump beams during transient SBS

    SciTech Connect

    Dementjev, Aleksandr S; Kosenko, E K; Murauskas, E; Girdauskas, V

    2006-08-31

    The radii and radii of curvature of Stokes stimulated Brillouin scattering (SBS) beams are measured by the method of moments for smooth nearly Gaussian focused pump beams with the propagation ratio M{sup 2}{sub {sigma}p{<=}}1.2. It is shown that in the case of sufficiently deeply focused pump radiation, the propagation ratio M{sup 2}{sub {sigma}S} of Stokes beams near the threshold of the transient SBS is smaller than M{sup 2}{sub {sigma}p} and approaches it with increasing the pump pulse energy. It is also found that the radii of Stokes beams at the output from a nonlinear medium are smaller than the radii of pump beams, while the radii of wave-front curvature are close (in modulus) to the radii of wave-front curvature for pump beams. (laser beams)

  10. Optical apparatus for conversion of whispering-gallery modes into a free space gaussian like beam

    DOEpatents

    Stallard, B.W.; Makowski, M.A.; Byers, J.A.

    1992-05-19

    An optical converter for efficient conversion of millimeter wavelength whispering-gallery gyrotron output into a linearly polarized, free-space Gaussian-like beam is described. The converter uses a mode-converting taper and three mirror optics. The first mirror has an azimuthal tilt to eliminate the k[sub [phi

  11. The design of Gaussian beam zoom system in intermediate and long distance measurement

    NASA Astrophysics Data System (ADS)

    Wang, Mengcheng; Zhou, Jian

    2016-10-01

    It is well known that laser possesses high brightness, high coherence, good directivity and other unique properties. In many practical applications, it is necessary to get small light spot in intermediate and long distance. Intermediate and long distance laser measurement demands to minimize the spot radius in order to improve the spatial resolution of the system and signal quality. Therefore, the study of Gaussian beam focusing property has high value for practical applications. In order to achieve intermediate and long distance laser measurement, this paper studies the method to adjust Gaussian beam spot diameter within a certain range after a near-field optical system transformation to improve the signal quality. Based on the fundamental characteristics of the Gaussian beam, this paper deduces the theoretical formula for the position and radius of the Gaussian beam waist and measures them by means of the CCD method. Then Matlab is used to simulate the spot diameter in the far field, and by combining numerical simulation results as well as optimizing the structure of the actual optical system, we make the light spot diameter in the target area fit the requirements of the laser velocimeter in intermediate and long distance measurement.

  12. Propagation of a Pearcey-Gaussian-vortex beam in free space and Kerr media

    NASA Astrophysics Data System (ADS)

    Peng, Yulian; Chen, Chidao; Chen, Bo; Peng, Xi; Zhou, Meiling; Zhang, Liping; Li, Dongdong; Deng, Dongmei

    2016-12-01

    The propagation of a Pearcey-Gaussian-vortex beam (PGVB) has been investigated numerically in free space and Kerr media. In addition, we have done a numerical experiment for the beam in free space. A PGVB maintains the characteristics of auto-focusing, self-healing and form-invariance which are possessed by a Pearcey beam and a Pearcey-Gaussian beam. Due to the influence of the optical vortex, a bright speck occurs in front of the main lobe. Compared with a Pearcey beam and a Pearcey-Gaussian beam, a PGVB has the most remarkable intensity singularity and the phase singularity. It is worth noting that the impact of the vortex at the coordinate origins means that a PGVB in the vicinity carries no angular momentum or transverse energy flow. We have investigated and numerically simulated the transverse intensity of a PGVB in Kerr media. We find that the auto-focusing of a PGVB in a Kerr medium becomes stronger with increasing power.

  13. Weakly diverging to tightly focused Gaussian beams: a single set of analytic expressions: continuation-symmetric beams.

    PubMed

    Levy, Uri; Silberberg, Yaron

    2017-03-01

    The always diverging-converging laser beams, more rigorously referred to as Gaussian beams, are part of many physical and electro-optical systems. Obviously, a single set of analytic expressions describing these beams in a large span of divergence-convergence angles at the focal plane, and at any distance away from the focal plane, will prove very handy. We have recently published three such analytic sets, one set for linearly polarized beams and two sets for radially polarized beams. However, our published analytic set for linearly polarized beams describes nonsymmetric electric-magnetic field components. Specifically, the strong transverse magnetic field component does not become elliptic at very large divergence angles as it should be, and the other transverse magnetic component, indeed very weak, is missing altogether. Here we present an analytic set of expressions symmetrically describing linearly polarized Gaussian beams. The symmetry applies to the x-electric y-magnetic components and vice versa and to the two electric-magnetic z-components. An important property of the presented set of expressions is power conservation. That is, the electromagnetic power crossing a plane transverse to the propagation direction in a unit time is conserved. Power conservation assures beam description accuracy at any axial distance. The presented analytic expressions, although not strictly satisfying Maxwell's equations, describe Gaussian beams with very reasonable accuracy from low divergence angles up to divergence angles as large as 0.8 rad in a medium with refractive index of 1.5, i.e., up to a NA of 1.1. These expressions should then readily assist in the design of practically all laser-related systems and in the research of diverse physics and electro-optic fields.

  14. Diffraction of a gaussian beam around a strip mask.

    PubMed

    Glass, M

    1998-05-01

    A theoretical treatment is given for the diffraction of a Gaussianbeam around an opaque strip mask. Such situations arise frequentlyin the diffraction of laser beams around wires and fibers. Scalarderivations are given for the Fraunhofer and Fresnel regions with bothdevelopments, leading to similar forms of rapidly convergent series forthe field at an observation plane. Predictions show good agreementwith measurements on the diffraction patterns from wires.

  15. Multi-Gaussian Schell-model beams.

    PubMed

    Korotkova, Olga; Sahin, Serkan; Shchepakina, Elena

    2012-10-01

    In a recent publication [Opt. Lett.37, 2970 (2012)10.1364/OL.37.002970], a novel class of planar stochastic sources, generating far fields with flat intensity profiles, was introduced. In this paper we examine the behavior of the spectral density and the state of coherence of beamlike fields generated by such sources on propagation in free space and linear isotropic random media. In particular, we find that at sufficiently large distances from the source, the medium destroys the flat intensity profile, even if it remains such for intermediate distances from the source.

  16. Gaussian beams for a linearized cold plasma confined in a torus

    NASA Astrophysics Data System (ADS)

    Cardinali, A.; Dobrokhotov, S. Yu.; Klevin, A.; Tirozzi, B.

    2016-04-01

    We consider a system of linear pde describing a cold plasma in a toroidal region in three-dimensional space. This system simulates the passage of a laser beam through the TOKAMAK, it consists of 9 equations for the electric field and the velocities of electrons and ions in a given magnetic field. Asymptotic solutions describing high-frequency Gaussian beams are constructed using the theory of Maslov complex germ in a fairly effective form. The solutions of the system are localized in the neighborhood of the beam passing through the toroidal domain (the camera). The equations for a ray take into account the density of particles in the camera and don't ``feel'' the presence of the magnetic field because of the high frequency of the Gaussian beam; the dependence on the magnetic field is contained in the amplitude of the electric field. Before the TOKAMAK camera the amplitude of the Gaussian beam is the same as in free space, but after the camera the amplitude vector rotates under the influence of the magnetic field. The formula for the angle of rotation is given explicitly. An analytical-numerical algorithm based on the asymptotic solutions is used to analyze the parameters of the magnetic field in the TOKAMAK.

  17. Second harmonic generation of Cosh-Gaussian laser beam in collisional plasma with nonlinear absorption

    NASA Astrophysics Data System (ADS)

    Singh, Navpreet; Gupta, Naveen; Singh, Arvinder

    2016-12-01

    This paper investigates second harmonic generation (SHG) of an intense Cosh-Gaussian (ChG) laser beam propagating through a preformed underdense collisional plasma with nonlinear absorption. Nonuniform heating of plasma electrons takes place due to the nonuniform irradiance of intensity along the wavefront of laser beam. This nonuniform heating of plasma leads to the self-focusing of the laser beam and thus produces strong density gradients in the transverse direction. The density gradients so generated excite an electron plasma wave (EPW) at pump frequency that interacts with the pump beam to produce its second harmonics. To envision the propagation dynamics of the ChG laser beam, moment theory in Wentzel-Kramers-Brillouin (W.K.B) approximation has been invoked. The effects of nonlinear absorption on self-focusing of the laser beam as well as on the conversion efficiency of its second harmonics have been theoretically investigated.

  18. Generating a Bessel-Gaussian beam for the application in optical engineering

    NASA Astrophysics Data System (ADS)

    Chu, Xiuxiang; Sun, Quan; Wang, Jing; Lü, Pin; Xie, Wenke; Xu, Xiaojun

    2015-12-01

    Bessel beam is the important member of the family of non-diffracting beams and has many novel properties which can be used in many areas. However, the source of Bessel beam generated by the existing methods can be used only in a short distance due to its low power. In this paper, based on the coherent combining technology, we have proposed a method which can be used to generate a high-power Bessel beam. Even more, we give an innovative idea to form vortex phase by using discontinuous piston phase. To confirm the validity of this method, the intensity evolution of the combined beam and the Bessel-Gaussian beam at different propagation distance have been studied and compared. Meanwhile, the experimental realization has been discussed from the existing experimental result related to the coherent combining technology.

  19. THz generation by self-focusing of hollow Gaussian laser beam in magnetised plasma

    NASA Astrophysics Data System (ADS)

    Hussain, Saba; Singh, Monika; Kishor Singh, Ram; Sharma, R. P.

    2014-09-01

    A scheme of terahertz (THz) generation is proposed by the self-focusing of a high-power laser beam having hollow Gaussian intensity profile in a collissionless magnetized plasma, where ponderomotive nonlinearity is operative. THz waves are resonantly excited at the difference frequency of laser and electron plasma wave (EPW) satisfying the proper phase matching conditions. In this paper first we have investigated the filamentation of the circularly polarized hollow Gaussian beam (HGB) propagating parallel to the direction of a static background magnetic field within the paraxial approximation, subsequently this filamented HG laser beam interplay with the electron plasma wave to generate a nonlinear current in the transverse direction, thereby producing THz radiations. The intensity of the emitted radiations are found to be highly sensitive to the order of the HGB. For the current scheme the power level of THz wave comes out to be ˜ 0.05 gigawatts.

  20. Miniaturized photogenerated electro-optic axicon lens Gaussian-to-Bessel beam conversion.

    PubMed

    Di Domenico, G; Parravicini, J; Antonacci, G; Silvestri, S; Agranat, A J; DelRe, E

    2017-04-01

    We experimentally demonstrate an electro-optic Gaussian-to-Bessel beam-converter miniaturized down to a 30×30  μm pixel in a potassium-lithium-tantalate-niobate (KLTN) paraelectric crystal. The converter is based on the electro-optic activation of a photoinduced and reconfigurable volume axicon lens achieved using a prewritten photorefractive funnel space-charge distribution. The transmitted light beam has a tunable depth of field that can be more than twice that of a conventional beam with the added feature of being self-healing.

  1. Optical apparatus for conversion of whispering-gallery modes into a free space gaussian like beam

    DOEpatents

    Stallard, Barry W.; Makowski, Michael A.; Byers, Jack A.

    1992-01-01

    An optical converter for efficient conversion of millimeter wavelength whispering-gallery gyrotron output into a linearly polarized, free-space Gaussian-like beam. The converter uses a mode-converting taper and three mirror optics. The first mirror has an azimuthal tilt to eliminate the k.sub..phi. component of the propagation vector of the gyrotron output beam. The second mirror has a twist reflector to linearly polarize the beam. The third mirror has a constant phase surface so the converter output is in phase.

  2. Design of a 1-MW, CW coaxial gyrotron with two gaussian beam outputs

    NASA Astrophysics Data System (ADS)

    Hirata, Y.; Hayashi, K.; Mitsunaka, Y.; Itoh, Y.; Sugawara, T.

    1995-04-01

    The design of a 170 GHz, 1 MW-CW gyrotron for electron cyclotron heating of nuclear fusion plasmas is presented. The designed gyrotron incorporates a coaxial cavity to reduce mode competition, and a coaxial electron gun to support the cavity inner conductor. A new mode converter splits the generated wave into two beams and radiates them in different directions. The radiated beams are transmitted to two output windows through two mirror systems, being transformed into Gaussian-like beams. A single-stage depressed collector improves the overall efficiency of the gyrotron and reduces the heat flux to the collector surface.

  3. Modeling Non-Gaussian Time Series with Nonparametric Bayesian Model.

    PubMed

    Xu, Zhiguang; MacEachern, Steven; Xu, Xinyi

    2015-02-01

    We present a class of Bayesian copula models whose major components are the marginal (limiting) distribution of a stationary time series and the internal dynamics of the series. We argue that these are the two features with which an analyst is typically most familiar, and hence that these are natural components with which to work. For the marginal distribution, we use a nonparametric Bayesian prior distribution along with a cdf-inverse cdf transformation to obtain large support. For the internal dynamics, we rely on the traditionally successful techniques of normal-theory time series. Coupling the two components gives us a family of (Gaussian) copula transformed autoregressive models. The models provide coherent adjustments of time scales and are compatible with many extensions, including changes in volatility of the series. We describe basic properties of the models, show their ability to recover non-Gaussian marginal distributions, and use a GARCH modification of the basic model to analyze stock index return series. The models are found to provide better fit and improved short-range and long-range predictions than Gaussian competitors. The models are extensible to a large variety of fields, including continuous time models, spatial models, models for multiple series, models driven by external covariate streams, and non-stationary models.

  4. Gaussian beam displacement sensor for monitoring interstory drift in smart buildings

    NASA Astrophysics Data System (ADS)

    Bennett, Kim D.; Hoover, C. W., III; Chen, Ru Z.; Plone, M. D.

    1994-05-01

    A method for measuring lateral displacements in structures is proposed based on the motion of a Gaussian optical beam. A sensor is designed and constructed using the free space output of a single mode optical fiber, which well approximates the Gaussian intensity distribution, and is tested in both quasi-static and dynamic displacement modes. Good agreement between the experimental data and the predicted output is obtained for small displacements of the size expected in real buildings. It is envisioned that this sensor could serve as the input to an active control system used to stabilize smart buildings experiencing earthquake and wind loads.

  5. Propagation of a partially coherent hollow vortex Gaussian beam through a paraxial ABCD optical system in turbulent atmosphere.

    PubMed

    Zhou, Guoquan; Cai, Yangjian; Chu, Xiuxiang

    2012-04-23

    The propagation of a partially coherent hollow vortex Gaussian beam through a paraxial ABCD optical system in turbulent atmosphere has been investigated. The analytical expressions for the average intensity and the degree of the polarization of a partially coherent hollow vortex Gaussian beam through a paraxial ABCD optical system are derived in turbulent atmosphere, respectively. The average intensity distribution and the degree of the polarization of a partially coherent hollow vortex Gaussian beam in turbulent atmosphere are numerically demonstrated. The influences of the beam parameters, the topological charge, the transverse coherent lengths, and the structure constant of the atmospheric turbulence on the propagation of a partially coherent hollow vortex Gaussian beam in turbulent atmosphere are also examined in detail. This research is beneficial to the practical applications in free-space optical communications and the remote sensing of the dark hollow beams.

  6. Orbital angular momentum and paraxial propagation characteristics of non-coaxial Laguerre-Gaussian beams.

    PubMed

    Huang, Chaohong; Zheng, Yishu; Li, Hanqing

    2016-11-01

    The orbital angular momentum (OAM) and paraxial propagation characteristics of non-coaxial Laguerre-Gaussian (LG) beams are discussed. In the initial plane, the amplitudes of non-coaxial LG modes are the product of a Laguerre polynomial, a vortex phase factor, and a non-coaxial Gaussian window function. Because of displacement between the centroid and vortex center of the beams, the non-coaxial LG beams demonstrate a non-zero extrinsic OAM, which causes the propagation of beam centroid to have a small tilt angle relative to the z axis. Through separating the extrinsic OAM from the total OAM carried by the non-coaxial LG beams, the tilt angle and trajectory of the beam centroid are derived. Furthermore, the paraxial propagating characteristics of these beams are also discussed analytically. The results show the vortex center initially at origin demonstrates a linear lateral shift with propagation and the peak of transverse intensity has a trajectory of a straight line, although the intensity profile rotates itself with propagation.

  7. Propagation of an Airy-Gaussian-Vortex beam in a chiral medium

    NASA Astrophysics Data System (ADS)

    Hua, Sen; Liu, Youwen; Zhang, Huijie; Tang, Liangzun; Feng, Yunxcai

    2017-04-01

    Based on the Huygens diffraction integral, the analytical expressions of electric field distribution of the Airy-Gaussian-Vortex (AiGV) beam in a chiral medium are derived, and its propagation properties are investigated. With increasing the value of chiral parameter γ, the parabolic deflection of the LCP light increases and the RCP light decreases respectively. For the first-order AiGV beam with only one positive or negative optical vortex (OV), a half-moon-shaped intensity profile can be observed because of overlap of the OV and the Airy main lobe, and then the main lobe will be reconstructed and the vortex could be recovered after the overlap position. The intensity distribution of AiGV beam, the deflection trajectories of central positions of Airy beam and OV under different competing parameters between Gaussian and Airy terms have been studied. Furthermore, for the second-order counterrotating AiGV beam with positive and negative vortexes, it could be considered the superposition of two first-order AiGV beams with respective positive and negative vortexes. Two vortexes can regenerate during propagation and the intensity distribution the AiGV beam in the far zone can be controlled by adjusting the coordinates of two vortexes.

  8. Influence of atmospheric turbulence on the energy focusability of Gaussian beams with spherical aberration

    NASA Astrophysics Data System (ADS)

    Deng, Jinping; Ji, Xiaoling

    2014-05-01

    By using the four-dimensional (4D) computer code of the time-dependent propagation of laser beams through atmospheric turbulence, the influence of atmospheric turbulence on the energy focusability of Gaussian beams with spherical aberration is studied in detail, where the mean-squared beam width, the power in the bucket (PIB), the β parameter and the energy Strehl ratio are taken as the characteristic parameters. It is shown that turbulence results in beam spreading, and the effect of spherical aberration on the beam spreading decreases due to turbulence. Gaussian beams with negative spherical aberration are more affected by turbulence than those with positive spherical aberration. For the negative spherical aberration case, the focus position moves to the source plane due to turbulence. It is mentioned that the influence of turbulence on the energy focusability defined by a certain energy (i.e. PIB = 63%) is very heavy when the negative spherical aberration is very heavy. On the other hand, the influence of turbulence on the energy focusability defined by the energy within a given bucket radius (i.e. mean-squared beam width) is heaviest when a certain negative spherical aberration coefficient is adopted.

  9. Statistical distribution of the OAM states of Bessel-Gaussian-Schell infrared beams in strong turbulent atmosphere

    NASA Astrophysics Data System (ADS)

    Li, Ye; Zhang, Yixin; Wang, Donglin; Shan, Lei; Xia, Mingchao; Zhao, Yuanhang

    2016-05-01

    The effects of strong turbulence on the orbital angular momentum (OAM) states of infrared and non-diffraction beam propagation in a terrestrial atmosphere are investigated. A new probability density model for OAM states of Bessel-Gaussian-Schell beam in the paraxial and strong turbulent channel is modeled based on the modified Rytov approximation. We find that the normalization energy weight of signal OAM modes at each OAM level is approximate equivalence in strong turbulence regime, one can constitute multiple mode channels by choosing OAM modes with large energy level difference between modes to reduce mode interference, and one can utilize BGS beam with OAM modes increasing the channel capacity of optical communications.

  10. Ponderomotive self-focusing of Gaussian laser beam in warm collisional plasma

    SciTech Connect

    Jafari Milani, M. R.; Niknam, A. R.; Farahbod, A. H.

    2014-06-15

    The propagation characteristics of a Gaussian laser beam through warm collisional plasma are investigated by considering the ponderomotive force nonlinearity and the complex eikonal function. By introducing the dielectric permittivity of warm unmagnetized plasma and using the WKB and paraxial ray approximations, the coupled differential equations defining the variations of laser beam parameters are obtained and solved numerically. Effects of laser and plasma parameters such as the collision frequency, the initial laser intensity and its spot size on the beam width parameter and the axis laser intensity distribution are analyzed. It is shown that, self-focusing of the laser beam takes place faster by increasing the collision frequency and initial laser spot size and then after some distance propagation the laser beam abruptly loses its initial diameter and vastly diverges. Furthermore, the modified electron density distribution is obtained and the collision frequency effect on this distribution is studied.

  11. Stochastic modeling of seafloor morphology: A parameterized Gaussian model

    SciTech Connect

    Goff, J.A.; Jordan, T.H. )

    1989-01-01

    Stochastic methods of analysis are useful for quantifying ensemble properties of small-scale bathymetric features such as abyssal hills. In this paper the authors model the seafloor as a stationary, zero-mean, Gaussian random field completely specified by its autocovariance function. They formulate an anisotropic autocovariance function that has five free parameters describing the amplitude, anisotropic orientation and aspect ratio, characteristic length, and Hausdorff (fractal) dimension of seafloor topography. Parameters estimated from various seafloor exhibits a wide range of stochastic characteristics within the constraints of the model. Synthetic topography can be generated at arbitrary scale and resolution from the Gaussian model using a Fourier method. Color images of these synthetics are useful for illustrating the stochastic behavior of the model.

  12. Negative refraction and backward wave in pseudochiral mediums: illustrations of Gaussian beams.

    PubMed

    Chern, Ruey-Lin; Chang, Po-Han

    2013-02-11

    We investigate the phenomena of negative refraction and backward wave in pseudochiral mediums, with illustrations of Gaussian beams. Due to symmetry breaking intrinsic in pseudochiral mediums, there exist two elliptically polarized eigenwaves with different wave vectors. As the chirality parameter increases from zero, the two waves begin to split from each other. For a wave incident from vacuum onto a pseudochiral medium, negative refraction may occur for the right-handed wave, whereas backward wave may appear for the left-handed wave. These features are illustrated with Gaussian beams based on Fourier integral formulations for the incident, reflected, and transmitted waves. Negative refraction and backward wave are manifest, respectively, on the energy flow in space and wavefront movement in time.

  13. Far-field properties and beam quality of vectorial Hermite-Laguerre-Gaussian beams beyond the paraxial approximation

    NASA Astrophysics Data System (ADS)

    Kang, Xiaoping; He, Zhong; Lü, Baida

    2007-07-01

    The far-field properties and beam quality of vectorial nonparaxial Hermite-Laguerre-Gaussian (HLG) beams are studied in detail, where, instead of the second-order-moments-based M2 factor, the extended power in the bucket (PIB) and βparameter are used to characterize the beam quality in the far field and the intensity in the formulae is replaced by the z component of the time-averaged Poynting vector . It is found that the PIB and βparameter of vectorial nonparaxial HLG beams depend on the mode indices n, m, αparameter and waist-width-to-wavelength ratio w0/ λ and the PIB and βparameter are additionally dependent on the bucket's size taken.

  14. Energy Extraction from the Electron Beam in a Free Electron Laser Resonator Gaussian Mode.

    DTIC Science & Technology

    1983-01-01

    Elias, Juan Gallardo and Peter Goldstein N00014-80-C-0308 S. PF OR -ING ORGANIZATION NAME AND ADDRESS I . PROGRAM ELEMt.T PROJECT, TASK * ,’ niwxrsity...Elias, Juan Gallardo , Peter Goldstein Quantum Institue, University of California Santa Barbara, California 93106 ABSTRACT We present preliminary...QUANTUM INSTITUTE FREE ELECTRON LASER PROJECT Energy Extraction fran the Electron Beam in a Free Electron Laser Resonator Gaussian Mode Luis Elias, Juan

  15. Gaussian beams for surface waves in laterally slowly-varying media

    NASA Technical Reports Server (NTRS)

    Yomogida, K.

    1985-01-01

    Asymptotic ray theory is applied to surface waves in a medium where the lateral variations of structure are very smooth. The elastodynamic equations of motion in ray-centered coordinates are derived, and a laterally slowly-varying approximation for elastodynamic equations is obtained. Parabolic equations for Love and Rayleigh waves are studied and solved, and the properties of Gaussian beams of seismic surface waves are examined.

  16. Use of Gaussian Beam Tracing in the Design of Millimeter-Wave Diagnostics on ITER

    NASA Astrophysics Data System (ADS)

    Joo, Heeseok; Bitter, Manfred; Tobias, Ben; Park, Hyeon; Zolfaghari, Ali

    2016-10-01

    When the wavelength of the radiation being studied is comparable to the size optical components, the diffraction effect cannot be ignored. Gaussian beam tracing (GBT) can be used by treating the propagation of the light as a beam with certain size rather than a ray used in geometrical optics when analyzing the optics of millimeter-wave diagnostics. Gaussian optics is an effective way to represent diffraction effect because of its ability to show the beam size and the intensity that could be altered from diffraction. GBT has been used in two millimeter-wave diagnostics suited to ITER geometry. The first is in a design of a Gaussian telescope for correction of transmission line misalignment in the ITER LFS reflectometer due to motion of the vessel during heating to operating temperature from room temperature. The second is a new concept of using spherical mirrors for electron cyclotron emission imaging (ECEI) and assessing its promise of a more realistic method of ECEI in ITER than previous idea of using a cylindrical mirror that requires large access ports that can be exposed to intense neutron radiation. The spherical mirror promises a smaller aperture on the first wall of ITER. The simulation of GBT of the two applications are analyzed and discussed. This work is supported by US DOE Contract No. DE-AC02-09CH11466.

  17. Gaussian mixture models as flux prediction method for central receivers

    NASA Astrophysics Data System (ADS)

    Grobler, Annemarie; Gauché, Paul; Smit, Willie

    2016-05-01

    Flux prediction methods are crucial to the design and operation of central receiver systems. Current methods such as the circular and elliptical (bivariate) Gaussian prediction methods are often used in field layout design and aiming strategies. For experimental or small central receiver systems, the flux profile of a single heliostat often deviates significantly from the circular and elliptical Gaussian models. Therefore a novel method of flux prediction was developed by incorporating the fitting of Gaussian mixture models onto flux profiles produced by flux measurement or ray tracing. A method was also developed to predict the Gaussian mixture model parameters of a single heliostat for a given time using image processing. Recording the predicted parameters in a database ensures that more accurate predictions are made in a shorter time frame.

  18. Properties of a strongly focused Gaussian beam with an off-axis vortex

    NASA Astrophysics Data System (ADS)

    Zhao, Xinying; Zhang, Jingcheng; Pang, Xiaoyan; Wan, Guobin

    2017-04-01

    The intensity distribution and the phase properties, especially the Gouy phase and the phase singularities are studied in a strongly focused Gaussian beam with an off-axis vortex. The symmetry relation of the focused field is also derived. It is found that the off-axis vortex induces a rotation of the field pattern, the transverse focal shift, and the asymmetric distribution of the phase singularities. Our results also show that the initial position of the off-axis vortex in the incident beam strongly influences the distance of the transverse focal shift, but does not have an effect on the Gouy phase along the central axis.

  19. Fraunhofer diffraction of Laguerre-Gaussian beam caused by a dynamic superposed dual-triangular aperture

    NASA Astrophysics Data System (ADS)

    Li, Xinzhong; Tai, Yuping; Nie, Zhaogang; Wang, Hui; Li, Hehe; Wang, Jingge; Tang, Jie; Wang, Yishan

    2015-12-01

    We investigate the Fraunhofer diffraction of a Laguerre-Gaussian (LG) beam incident on a dynamic superposed dual-triangular aperture. The evolution of the diffraction pattern from this aperture is analyzed experimentally and theoretically. A special aperture, called the hex-star triangular aperture, demonstrates interesting diffraction patterns. Further, the diffraction properties of integer, half-integer, and fractional orders of topological charges at the Fraunhofer zone are studied by using the hex-star triangular aperture. This study can provide additional information to enhance the understanding of the diffraction properties of the LG beam transmitted through a complex aperture.

  20. Determining the waist radius of a focused Gaussian laser beam using a millimeter-scale ruler

    NASA Astrophysics Data System (ADS)

    Yang, Pao-Keng; Liu, Jian-You

    2017-03-01

    We present a simple and inexpensive method for determining the waist radius of a focused Gaussian laser beam. This method is motivated by the fact that if you focus the laser beam using a lens, the distance from the lens to the waist will vary slightly as the lens is moved along the beam-propagating direction. We show how the waist radius can be calculated from four large longitudinal lengths, measurable using a conventional millimeter-scale ruler. Analyzing the dependence of the calculated waist radius on these four measured lengths numerically shows that the accuracy of the calculated waist radius is mainly affected by the error in the relative shift in the distance from the lens to the waist position. The calculated waist radius for a real HeNe laser is close to the one measured directly using a commercial beam profiler with an error within 7%.

  1. Scintillation reduction for combined Gaussian-vortex beam propagating through turbulent atmosphere

    SciTech Connect

    Berman, Gennady P; Gorshkov, V. N.; Torous, S. V.

    2010-12-14

    We numerically examine the spatial evolution of the structure of coherent and partially coherent laser beams (PCBs), including the optical vortices, propagating in turbulent atmospheres, The influence of beam fragmentation and wandering relative to the axis of propagation (z-axis) on the value of the scintillation index (SI) of the signal at the detector is analyzed. A method for significantly reducing the SI, by averaging the signal at the detector over a set of PCBs, is described, This novel method is to generate the PCBs by combining two laser beams - Gaussian and vortex beams, with different frequencies (the difference between these two frequencies being significantly smaller than the frequencies themselves). In this case, the SI is effectively suppressed without any high-frequency modulators.

  2. Theory and Modeling of Stimulated Raman Scattering

    DTIC Science & Technology

    1993-06-01

    nondiffraction- limited pump beam, Gaussian -Hermite (G-H) beams, Gaussian -Laguerre (G-L) beams, and Gaussian - Schell - model (GSM) beams are used. The AM2 factor...Laguerre (G-L) beams, and Gaussian - Schell - model (GSM) beams are used. The M 2 factor of these beams can be calculated analytically. A random...defined for elliptical beams and AM2 is not changed by astigmatic lenses. The Gaussian - Schell - model (GSM) beam has a Gaussian intensity profile given

  3. GeV electron acceleration by a Gaussian field laser with effect of beam width parameter in magnetized plasma

    NASA Astrophysics Data System (ADS)

    Ghotra, Harjit Singh; Kant, Niti

    2017-01-01

    Electron acceleration due to a circularly polarized (CP) Gaussian laser field has been investigated theoretically in magnetized plasma. A Gaussian laser beam possesses trapping forces on electrons during its propagation through plasma. A single particle simulation indicates a resonant enhancement of electron acceleration with a Gaussian laser beam. The plasma is magnetized with an axial magnetic field in same direction as that of laser beam propagation. The dependence of laser beam width parameter on electron energy gain with propagation distance has been presented graphically for different values of laser intensity. Electron energy gain is relatively high where the laser beam parameter is at its minimum value. Enhanced energy gain of the order of GeV is reported with magnetic field under 20 MG in plasma. It is also seen that the axial magnetic field maintains the electron acceleration for large propagation distance even with an increasing beam width parameter.

  4. A fast algorithm for depth migration by the Gaussian beam summation method

    NASA Astrophysics Data System (ADS)

    Gao, Zhenghui; Sun, Jianguo; Sun, Xu; Wang, Xueqiu; Sun, Zhangqing; Liu, Zhiqiang

    2017-02-01

    Depth migration by the Gaussian beam summation method has no limitation on the seismic acquisition configuration. In the past, this migration method applied the steepest descent approximation to reduce the dimension of the integrals over the ray parameters at the cost of a precision loss. However, the simplified formula was still in the frequency domain, thereby impairing the computational efficiency. We present a new fast algorithm which can increase the computational efficiency without losing precision. To develop the fast algorithm, we change the order of the integrals and treat the two innermost integrals as a couple of two-dimensional continuous functions with respect to the real and imaginary parts of the total traveltime. A couple of lookup tables corresponding to the values of the two innermost integrals are constructed at the sampling points. The results of the two innermost integrals at a certain imaging point can be obtained through interpolation in the two constructed lookup tables. Both the numerical analysis and examples validate the precision and efficiency of the fast algorithm. With the advantage of handling rugged topography, we apply the fast algorithm to the 2D Canadian Foothills velocity model.

  5. Analytical solution for multi-singular vortex Gaussian beams: the mathematical theory of scattering modes

    NASA Astrophysics Data System (ADS)

    Ferrando, A.; García-March, M. A.

    2016-06-01

    We present a novel procedure for solving the Schrödinger equation, which in optics is the paraxial wave equation, with an initial multisingular vortex Gaussian beam. This initial condition has a number of singularities in a plane transversal to propagation embedded in a Gaussian beam. We use scattering modes, which are solutions to the paraxial wave equation that can be combined straightforwardly to express the initial condition and therefore allow the problem to be solved. To construct the scattering modes one needs to obtain a particular set of polynomials, which play an analogous role to Laguerre polynomials for Laguerre-Gaussian modes. We demonstrate here the recurrence relations needed to determine these polynomials. To stress the utility and strength of the method we solve first the problem of an initial Gaussian beam with two positive singularities and a negative one embedded in it. We show that the solution permits one to obtain analytical expressions. These can used to obtain mathematical expressions for meaningful quantities, such as the distance at which the positive and negative singularities merge, closing the loop of a vortex line. Furthermore, we present an example of the calculation of an specific discrete-Gauss state, which is the solution of the diffraction of a Laguerre-Gauss state showing definite angular momentum (that is, a highly charged vortex) by a thin diffractive element showing certain discrete symmetry. We show that this problem is therefore solved in a much simpler way than by using the previous procedure based on the integral Fresnel diffraction method.

  6. Probing the interaction between two microspheres in a single Gaussian beam optical trap

    NASA Astrophysics Data System (ADS)

    Parthasarathi, Praveen; Iyengar, Shruthi Subhash; Lakkegowda, Yogesha; Bhattacharya, Sarbari; Ananthamurthy, Sharath

    2016-09-01

    Interactions between trapped microspheres have been studied in two geometries so far: (i) using line optical tweezers and (ii) in traps using two counter propagating laser beams. In both trap geometries, the stable inter bead separations have been attributed to optical binding. One could also trap two such beads in a single beam Gaussian laser trap. While there are reports that address this configuration through theoretical or simulation based treatments, there has so far been no detailed experimental work that measures the interactions. In this work, we have recorded simultaneously the fluctuation spectra of two beads trapped along the laser propagation direction in a single Gaussian beam trap by measuring the back scattered signal from the trapping and a tracking laser beam that are counter propagating . The backscattering from the trapping laser monitors the bead encountered earlier in the propagation path. The counter propagating tracking laser, on the other hand, is used to monitor the fluctuations of the second bead. Detection is by using quadrant photo detectors placed at either end. The autocorrelation functions of both beads reveal marked departures from that obtained when there is only one bead in the trap. Moreover, the fall-off profiles of the autocorrelation indicates the presence of more than one relaxation time. This indicates a method of detecting the presence of a second bead in a trap without directly carrying out measurements on it. Further, a careful analysis of the relaxation times could also reveal the nature of interactions between the beads.

  7. Average intensity and directionality of partially coherent model beams propagating in turbulent ocean.

    PubMed

    Wu, Yuqian; Zhang, Yixin; Zhu, Yun

    2016-08-01

    We studied Gaussian beams with three different partially coherent models, including the Gaussian-Schell model (GSM), Laguerre-Gaussian Schell model (LGSM), and Bessel-Gaussian Schell model (BGSM), propagating through oceanic turbulence. The expressions of average intensity, beam spreading, and beam wander for GSM, LGSM, and BGSM beams in the paraxial channel are derived. We make a contrast for the three models in numerical simulations and find that the GSM beam has smaller spreading than the others, and the LGSM beam needs longer propagation distance to transform into a well-like profile of average intensity than the BGSM beam in the same conditions. The salinity fluctuation has a greater contribution to the wander of LGSM and BGSM beams than that of the temperature fluctuation. Our results can be helpful in the design of an optical wireless communication link operating in oceanic environment.

  8. A linear-time algorithm for Gaussian and non-Gaussian trait evolution models.

    PubMed

    Ho, Lam si Tung; Ané, Cécile

    2014-05-01

    We developed a linear-time algorithm applicable to a large class of trait evolution models, for efficient likelihood calculations and parameter inference on very large trees. Our algorithm solves the traditional computational burden associated with two key terms, namely the determinant of the phylogenetic covariance matrix V and quadratic products involving the inverse of V. Applications include Gaussian models such as Brownian motion-derived models like Pagel's lambda, kappa, delta, and the early-burst model; Ornstein-Uhlenbeck models to account for natural selection with possibly varying selection parameters along the tree; as well as non-Gaussian models such as phylogenetic logistic regression, phylogenetic Poisson regression, and phylogenetic generalized linear mixed models. Outside of phylogenetic regression, our algorithm also applies to phylogenetic principal component analysis, phylogenetic discriminant analysis or phylogenetic prediction. The computational gain opens up new avenues for complex models or extensive resampling procedures on very large trees. We identify the class of models that our algorithm can handle as all models whose covariance matrix has a 3-point structure. We further show that this structure uniquely identifies a rooted tree whose branch lengths parametrize the trait covariance matrix, which acts as a similarity matrix. The new algorithm is implemented in the R package phylolm, including functions for phylogenetic linear regression and phylogenetic logistic regression.

  9. Conservation relation of nonclassicality and entanglement for Gaussian states in a beam splitter

    NASA Astrophysics Data System (ADS)

    Ge, Wenchao; Tasgin, Mehmet Emre; Zubairy, M. Suhail

    2015-11-01

    We study the relation between single-mode nonclassicality and two-mode entanglement in a beam splitter. We show that single-mode nonclassicality (the entanglement potential) of incident light cannot be transformed into two-mode entanglement completely after a single beam splitter. Some of the entanglement potential remains as single-mode nonclassicality in the two entangled output modes. Two-mode entanglement generated in the process can be equivalently quantified as an increase in the minimum uncertainty widths (or decrease in the squeezing) of the output states compared to the input states. We use the nonclassical depth and logarithmic negativity as single-mode nonclassicality and entanglement measures, respectively. We realize that a conservation relation between the two quantities can be adopted for Gaussian states, if one works in terms of uncertainty width. This conservation relation is extended to many sets of beam splitters.

  10. The backward phase flow and FBI-transform-based Eulerian Gaussian beams for the Schrödinger equation

    NASA Astrophysics Data System (ADS)

    Leung, Shingyu; Qian, Jianliang

    2010-11-01

    We propose the backward phase flow method to implement the Fourier-Bros-Iagolnitzer (FBI)-transform-based Eulerian Gaussian beam method for solving the Schrödinger equation in the semi-classical regime. The idea of Eulerian Gaussian beams has been first proposed in [12]. In this paper we aim at two crucial computational issues of the Eulerian Gaussian beam method: how to carry out long-time beam propagation and how to compute beam ingredients rapidly in phase space. By virtue of the FBI transform, we address the first issue by introducing the reinitialization strategy into the Eulerian Gaussian beam framework. Essentially we reinitialize beam propagation by applying the FBI transform to wavefields at intermediate time steps when the beams become too wide. To address the second issue, inspired by the original phase flow method, we propose the backward phase flow method which allows us to compute beam ingredients rapidly. Numerical examples demonstrate the efficiency and accuracy of the proposed algorithms.

  11. Magnetization shaping generated by tight focusing of azimuthally polarized vortex multi-Gaussian beam.

    PubMed

    Yan, Weichao; Nie, Zhongquan; Zhang, Xueru; Wang, Yuxiao; Song, Yinglin

    2017-03-01

    Combining the vector diffraction theory with the inverse Faraday effect, we have theoretically studied magnetization shaping generated by tight focusing of an azimuthally polarized multi-Gaussian beam superimposed with a helical phase. By selecting optimized parameters of a multi-Gaussian beam and topological charge of a spiral phase plate, not only a super-long and sub-wavelength longitudinal magnetization needle with single/dual channels for a single-lens high numerical aperture focusing system, but also an extra-long and three-dimensional super-resolution longitudinal magnetization chain with single/dual channels for a 4π high numerical aperture focusing system is achieved in the focal region. Furthermore, by continuously changing the phase difference between two counter-propagating beams, these super-long longitudinal magnetization chains with three-dimensional super-resolution can dynamically move along the z-axis. It is expected that these results pave the path for fabricating magnetic lattices for spin wave operation, multiple atoms or magnetic particle trapping and transportation, confocal and magnetic resonance microscopy, as well as multilayer ultrahigh density magnetic storage.

  12. Inspection of commercial optical devices for data storage using a three Gaussian beam microscope interferometer

    SciTech Connect

    Flores, J. Mauricio; Cywiak, Moises; Servin, Manuel; Juarez P, Lorenzo

    2008-09-20

    Recently, an interferometric profilometer based on the heterodyning of three Gaussian beams has been reported. This microscope interferometer, called a three Gaussian beam interferometer, has been used to profile high quality optical surfaces that exhibit constant reflectivity with high vertical resolution and lateral resolution near {lambda}. We report the use of this interferometer to measure the profiles of two commercially available optical surfaces for data storage, namely, the compact disk (CD-R) and the digital versatile disk (DVD-R). We include experimental results from a one-dimensional radial scan of these devices without data marks. The measurements are taken by placing the devices with the polycarbonate surface facing the probe beam of the interferometer. This microscope interferometer is unique when compared with other optical measuring instruments because it uses narrowband detection, filters out undesirable noisy signals, and because the amplitude of the output voltage signal is basically proportional to the local vertical height of the surface under test, thus detecting with high sensitivity. We show that the resulting profiles, measured with this interferometer across the polycarbonate layer, provide valuable information about the track profiles, making this interferometer a suitable tool for quality control of surface storage devices.

  13. Inspection of commercial optical devices for data storage using a three Gaussian beam microscope interferometer.

    PubMed

    Flores, J Mauricio; Cywiak, Moisés; Servín, Manuel; Juárez, Lorenzo

    2008-09-20

    Recently, an interferometric profilometer based on the heterodyning of three Gaussian beams has been reported. This microscope interferometer, called a three Gaussian beam interferometer, has been used to profile high quality optical surfaces that exhibit constant reflectivity with high vertical resolution and lateral resolution near lambda. We report the use of this interferometer to measure the profiles of two commercially available optical surfaces for data storage, namely, the compact disk (CD-R) and the digital versatile disk (DVD-R). We include experimental results from a one-dimensional radial scan of these devices without data marks. The measurements are taken by placing the devices with the polycarbonate surface facing the probe beam of the interferometer. This microscope interferometer is unique when compared with other optical measuring instruments because it uses narrowband detection, filters out undesirable noisy signals, and because the amplitude of the output voltage signal is basically proportional to the local vertical height of the surface under test, thus detecting with high sensitivity. We show that the resulting profiles, measured with this interferometer across the polycarbonate layer, provide valuable information about the track profiles, making this interferometer a suitable tool for quality control of surface storage devices.

  14. Measurement of Gaussian laser beam radius using the knife-edge technique: improvement on data analysis

    SciTech Connect

    Araujo, Marcos A. de; Silva, Rubens; Lima, Emerson de; Pereira, Daniel P.; Oliveira, Paulo C. de

    2009-01-10

    We revisited the well known Khosrofian and Garetz inversion algorithm [Appl. Opt.22, 3406-3410 (1983)APOPAI0003-6935] that was developed to analyze data obtained by the application of the traveling knife-edge technique. We have analyzed the approximated fitting function that was used for adjusting their experimental data and have found that it is not optimized to work with a full range of the experimentally-measured data. We have numerically calculated a new set of coefficients, which makes the approximated function suitable for a full experimental range, considerably improving the accuracy of the measurement of a radius of a focused Gaussian laser beam.

  15. Reflection and refraction of narrow Gaussian beams with general astigmatism at tilted optical surfaces: a derivation oriented toward lens design.

    PubMed

    Greco, Vincenzo; Giusfredi, Giovanni

    2007-02-01

    The formulas for the reflection and refraction of a narrow Gaussian beam with general astigmatism at a tilted optical surface are derived by ray-tracing techniques. The propagation direction of the reflected and refracted beams is computed by tracing the central ray of the incident beam, and the characteristic parameters of the respective wavefronts are worked out by applying the formulas developed for the generalized ray tracing. Moreover, the Gaussian form of the reflected and refracted amplitude distributions along the transverse coordinates is determined by requiring the matching of the incident, reflected, and refracted light spots on the optical surface. No limiting assumptions are made regarding the form of the optical interface or the orientation of the incident astigmatic wavefront. In the end, to illustrate a simple application of these formulas, the reflection of a Gaussian beam at a conicoid is considered, and a simple property of the conicoidal mirrors is reported.

  16. Velocity fields in non-Gaussian cold dark matter models

    NASA Astrophysics Data System (ADS)

    Lucchin, F.; Matarrese, S.; Messina, A.; Moscardini, L.; Tormen, G.

    1995-02-01

    We analyse the large-scale velocity field obtained by N-body simulations of cold dark matter (CDM) models with non-Gaussian primordial density fluctuations, considering models with both positive and negative primordial skewness in the density fluctuation distribution. We study the velocity probability distribution and calculate the dependence of the bulk flow, one-point velocity dispersion and cosmic Mach number on the filtering size. We find that the sign of the primordial skewness of the density field provides poor discriminatory power on the evolved velocity field. All non-Gaussian models considered here tend to have lower velocity dispersion and bulk flow than the standard Gaussian CDM model, while the cosmic Mach number turns out to be a poor statistic in characterizing the models. We also compare the large-scale velocity field of a composite sample of optically selected galaxies as described by the Local Group properties, bulk flow, velocity correlation function and cosmic Mach number with the velocity field of mock catalogues extracted from the N-body simulations. The comparison does not clearly single out the best model: the standard Gaussian model is, however, marginally preferred by the maximum likelihood analysis.

  17. Experimental demonstration of scanning phase retrieval by a noniterative method with a Gaussian-amplitude beam

    NASA Astrophysics Data System (ADS)

    Nakajima, Nobuharu; Yoshino, Masayuki

    2017-01-01

    We present a proof-of-principle experiment of an analytic (noniterative) phase-retrieval method for coherent imaging systems under scanning illumination of a probe beam. This method allows to reconstruct the amplitude and phase distribution of a semi-transparent object over a wide area from intensities measured at three points in the Fourier plane of the object under scanning illumination of a known Gaussian-amplitude beam in the object plane. The present measurement system is very simple in contrast to ones of interferometric techniques, and also the speed of the calculation of phase retrieval in this method is faster than that in iterative algorithms since this method is based on an analytic solution to the phase retrieval. The effectiveness of this method is shown in experimental examples of the object reconstructions of a converging lens and a plastic plate for scratch standards.

  18. A study of Gaussian approximations of fluorescence microscopy PSF models

    NASA Astrophysics Data System (ADS)

    Zhang, Bo; Zerubia, Josiane; Olivo-Marin, Jean-Christophe

    2006-02-01

    Despite the availability of rigorous physical models of microscopy point spread functions (PSFs), approximative PSFs, particularly separable Gaussian approximations are widely used in practical microscopic data processing. In fact, compared with a physical PSF model, which usually involves non-trivial terms such as integrals and infinite series, a Gaussian function has the advantage that it is much simpler and can be computed much faster. Moreover, due to its special analytical form, a Gaussian PSF is often preferred to facilitate the analysis of theoretical models such as Fluorescence Recovery After Photobleaching (FRAP) process and of processing algorithms such as EM deconvolution. However, in these works, the selection of Gaussian parameters and the approximation accuracy were rarely investigated. In this paper, we present a comprehensive study of Gaussian approximations for diffraction-limited 2D/3D paraxial/non-paraxial PSFs of Wide Field Fluorescence Microscopy (WFFM), Laser Scanning Confocal Microscopy (LSCM) and Disk Scanning Confocal Microscopy (DSCM) described using the Debye integral. Besides providing an optimal Gaussian parameter for the 2D paraxial WFFM PSF case, we further derive nearly optimal parameters in explicit forms for each of the other cases, based on Maclaurin series matching. Numerical results show that the accuracy of the 2D approximations is very high (Relative Squared Error (RSE) < 2% in WFFM, < 0.3% in LSCM and < 4% in DSCM). For the 3D PSFs, the approximations are average in WFFM (RSE ~= 16-20%), accurate in DSCM (RSE~= 3-6%) and nearly perfect in LSCM (RSE ~= 0.3-0.5%).

  19. Second harmonic generation by self-focusing of intense hollow Gaussian laser beam in collisionless plasma

    SciTech Connect

    Purohit, Gunjan Rawat, Priyanka; Gauniyal, Rakhi

    2016-01-15

    The effect of self focused hollow Gaussian laser beam (HGLB) (carrying null intensity in center) on the excitation of electron plasma wave (EPW) and second harmonic generation (SHG) has been investigated in collisionless plasma, where relativistic-ponderomotive and only relativistic nonlinearities are operative. The relativistic change of electron mass and the modification of the background electron density due to ponderomotive nonlinearity lead to self-focusing of HGLB in plasma. Paraxial ray theory has been used to derive coupled equations for the self focusing of HGLB in plasma, generation of EPW, and second harmonic. These coupled equations are solved analytically and numerically to study the laser intensity in the plasma, electric field associated with the excited EPW, and the power of SHG. Second harmonic emission is generated due to nonlinear coupling between incident HGLB and EPW satisfying the proper phase matching conditions. The results show that the effect of including the ponderomotive nonlinearity is significant on the generation of EPW and second harmonic. The electric field associated with EPW and the power of SHG are found to be highly sensitive to the order of the hollow Gaussian beam.

  20. Second harmonic generation by self-focusing of intense hollow Gaussian laser beam in collisionless plasma

    NASA Astrophysics Data System (ADS)

    Purohit, Gunjan; Rawat, Priyanka; Gauniyal, Rakhi

    2016-01-01

    The effect of self focused hollow Gaussian laser beam (HGLB) (carrying null intensity in center) on the excitation of electron plasma wave (EPW) and second harmonic generation (SHG) has been investigated in collisionless plasma, where relativistic-ponderomotive and only relativistic nonlinearities are operative. The relativistic change of electron mass and the modification of the background electron density due to ponderomotive nonlinearity lead to self-focusing of HGLB in plasma. Paraxial ray theory has been used to derive coupled equations for the self focusing of HGLB in plasma, generation of EPW, and second harmonic. These coupled equations are solved analytically and numerically to study the laser intensity in the plasma, electric field associated with the excited EPW, and the power of SHG. Second harmonic emission is generated due to nonlinear coupling between incident HGLB and EPW satisfying the proper phase matching conditions. The results show that the effect of including the ponderomotive nonlinearity is significant on the generation of EPW and second harmonic. The electric field associated with EPW and the power of SHG are found to be highly sensitive to the order of the hollow Gaussian beam.

  1. Spatial solitons in a three-level atomic medium supported by a Laguerre-Gaussian control beam

    SciTech Connect

    Hang Chao; Konotop, V. V.

    2011-05-15

    We investigate the existence and stability of various types of spatial solitons in a three-level atomic medium with Laguerre-Gaussian control beam. Radial and azimuthal modulations of the medium properties, introduced by the control beam, provide possibilities for existence of diverse soliton patterns and dynamics. Beam diffraction provides additional soliton controllability. All types of solitons can be generated at very low input energy at a few-photon level.

  2. Identification of Hot Spots in Protein Structures Using Gaussian Network Model and Gaussian Naive Bayes

    PubMed Central

    Jiang, Tao; Shan, Guogen

    2016-01-01

    Residue fluctuations in protein structures have been shown to be highly associated with various protein functions. Gaussian network model (GNM), a simple representative coarse-grained model, was widely adopted to reveal function-related protein dynamics. We directly utilized the high frequency modes generated by GNM and further performed Gaussian Naive Bayes (GNB) to identify hot spot residues. Two coding schemes about the feature vectors were implemented with varying distance cutoffs for GNM and sliding window sizes for GNB based on tenfold cross validations: one by using only a single high mode and the other by combining multiple modes with the highest frequency. Our proposed methods outperformed the previous work that did not directly utilize the high frequency modes generated by GNM, with regard to overall performance evaluated using F1 measure. Moreover, we found that inclusion of more high frequency modes for a GNB classifier can significantly improve the sensitivity. The present study provided additional valuable insights into the relation between the hot spots and the residue fluctuations. PMID:27882325

  3. Fresnel and Fraunhofer diffraction of a Gaussian laser beam by fork-shaped gratings.

    PubMed

    Janicijevic, Ljiljana; Topuzoski, Suzana

    2008-11-01

    Expressions describing the vortex beams that are generated by the process of Fresnel diffraction of a Gaussian beam incident out of waist on fork-shaped gratings of arbitrary integer charge p, and vortex spots in the case of Fraunhofer diffraction by these gratings, are deduced. The common general transmission function of the gratings is defined and specialized for the cases of amplitude holograms, binary amplitude gratings, and their phase versions. Optical vortex beams, or carriers of phase singularity with charges mp and -mp, are the higher negative and positive diffraction-order beams. The radial part of their wave amplitudes is described by the product of the mpth-order Gauss-doughnut function and a Kummer function, or by the first-order Gauss-doughnut function and the difference of two modified Bessel functions whose orders do not match the singularity charge value. The wave amplitude and the intensity distributions are discussed for the near and far fields in the focal plane of a convergent lens, as well as the specialization of the results when the grating charge p=0; i.e., the grating turns from forked into rectilinear. The analytical expressions for the vortex radii are also discussed.

  4. A symplectic coherent beam-beam model

    SciTech Connect

    Furman, M.A.

    1989-05-01

    We consider a simple one-dimensional model to study the effects of the beam-beam force on the coherent dynamics of colliding beams. The key ingredient is a linearized beam-beam kick. We study only the quadrupole modes, with the dynamical variables being the 2nd-order moments of the canonical variables q, p. Our model is self-consistent in the sense that no higher order moments are generated by the linearized beam-beam kicks, and that the only source of violation of symplecticity is the radiation. We discuss the round beam case only, in which vertical and horizontal quantities are assumed to be equal (though they may be different in the two beams). Depending on the values of the tune and beam intensity, we observe steady states in which otherwise identical bunches have sizes that are equal, or unequal, or periodic, or behave chaotically from turn to turn. Possible implications of luminosity saturation with increasing beam intensity are discussed. Finally, we present some preliminary applications to an asymmetric collider. 8 refs., 8 figs.

  5. Angle-domain common-image gathers from anisotropic Gaussian beam migration and its application to anisotropy-induced imaging errors analysis

    NASA Astrophysics Data System (ADS)

    Han, Jianguang; Wang, Yun; Yu, Changqing; Chen, Peng

    2017-02-01

    An approach for extracting angle-domain common-image gathers (ADCIGs) from anisotropic Gaussian beam prestack depth migration (GB-PSDM) is presented in this paper. The propagation angle is calculated in the process of migration using the real-value traveltime information of Gaussian beam. Based on the above, we further investigate the effects of anisotropy on GB-PSDM, where the corresponding ADCIGs are extracted to assess the quality of migration images. The test results of the VTI syncline model and the TTI thrust sheet model show that anisotropic parameters ɛ, δ, and tilt angle 𝜃, have a great influence on the accuracy of the migrated image in anisotropic media, and ignoring any one of them will cause obvious imaging errors. The anisotropic GB-PSDM with the true anisotropic parameters can obtain more accurate seismic images of subsurface structures in anisotropic media.

  6. Rao-Blackwellization for Adaptive Gaussian Sum Nonlinear Model Propagation

    NASA Technical Reports Server (NTRS)

    Semper, Sean R.; Crassidis, John L.; George, Jemin; Mukherjee, Siddharth; Singla, Puneet

    2015-01-01

    When dealing with imperfect data and general models of dynamic systems, the best estimate is always sought in the presence of uncertainty or unknown parameters. In many cases, as the first attempt, the Extended Kalman filter (EKF) provides sufficient solutions to handling issues arising from nonlinear and non-Gaussian estimation problems. But these issues may lead unacceptable performance and even divergence. In order to accurately capture the nonlinearities of most real-world dynamic systems, advanced filtering methods have been created to reduce filter divergence while enhancing performance. Approaches, such as Gaussian sum filtering, grid based Bayesian methods and particle filters are well-known examples of advanced methods used to represent and recursively reproduce an approximation to the state probability density function (pdf). Some of these filtering methods were conceptually developed years before their widespread uses were realized. Advanced nonlinear filtering methods currently benefit from the computing advancements in computational speeds, memory, and parallel processing. Grid based methods, multiple-model approaches and Gaussian sum filtering are numerical solutions that take advantage of different state coordinates or multiple-model methods that reduced the amount of approximations used. Choosing an efficient grid is very difficult for multi-dimensional state spaces, and oftentimes expensive computations must be done at each point. For the original Gaussian sum filter, a weighted sum of Gaussian density functions approximates the pdf but suffers at the update step for the individual component weight selections. In order to improve upon the original Gaussian sum filter, Ref. [2] introduces a weight update approach at the filter propagation stage instead of the measurement update stage. This weight update is performed by minimizing the integral square difference between the true forecast pdf and its Gaussian sum approximation. By adaptively updating

  7. Response to “Comment on ‘Stationary self-focusing of Gaussian laser beam in relativistic thermal quantum plasma’” [Phys. Plasmas 21, 064701 (2014)

    SciTech Connect

    Patil, S. D.; Takale, M. V.

    2014-06-15

    Habibi and Ghamari have presented a Comment on our paper [Phys. Plasmas 20, 072703 (2013)] by examining quantum dielectric response in thermal quantum plasma. They have modeled the relativistic self-focusing of Gaussian laser beam in cold and warm quantum plasmas and reported that self-focusing length does not change in both situations. In this response, we have reached the following important conclusions about the comment itself.

  8. Moving vehicles segmentation based on Gaussian motion model

    NASA Astrophysics Data System (ADS)

    Zhang, Wei; Fang, Xiang Z.; Lin, Wei Y.

    2005-07-01

    Moving objects segmentation is a challenge in computer vision. This paper focuses on the segmentation of moving vehicles in dynamic scene. We analyses the psychology of human vision and present a framework for segmenting moving vehicles in the highway. The proposed framework consists of two parts. Firstly, we propose an adaptive background update method in which the background is updated according to the change of illumination conditions and thus can adapt to the change of illumination sensitively. Secondly, we construct a Gaussian motion model to segment moving vehicles, in which the motion vectors of the moving pixels are modeled as a Gaussian model and an on-line EM algorithm is used to update the model. The Gaussian distribution of the adaptive model is elevated to determine which moving vectors result from moving vehicles and which from other moving objects such as waving trees. Finally, the pixels with motion vector result from the moving vehicles are segmented. Experimental results of several typical scenes show that the proposed model can detect the moving vehicles correctly and is immune from influence of the moving objects caused by the waving trees and the vibration of camera.

  9. BEAMS3D Neutral Beam Injection Model

    SciTech Connect

    Lazerson, Samuel

    2014-04-14

    With the advent of applied 3D fi elds in Tokamaks and modern high performance stellarators, a need has arisen to address non-axisymmetric effects on neutral beam heating and fueling. We report on the development of a fully 3D neutral beam injection (NBI) model, BEAMS3D, which addresses this need by coupling 3D equilibria to a guiding center code capable of modeling neutral and charged particle trajectories across the separatrix and into the plasma core. Ionization, neutralization, charge-exchange, viscous velocity reduction, and pitch angle scattering are modeled with the ADAS atomic physics database [1]. Benchmark calculations are presented to validate the collisionless particle orbits, neutral beam injection model, frictional drag, and pitch angle scattering effects. A calculation of neutral beam heating in the NCSX device is performed, highlighting the capability of the code to handle 3D magnetic fields.

  10. Strong self-focusing of a cosh-Gaussian laser beam in collisionless magneto-plasma under plasma density ramp

    SciTech Connect

    Nanda, Vikas; Kant, Niti

    2014-07-15

    The effect of plasma density ramp on self-focusing of cosh-Gaussian laser beam considering ponderomotive nonlinearity is analyzed using WKB and paraxial approximation. It is noticed that cosh-Gaussian laser beam focused earlier than Gaussian beam. The focusing and de-focusing nature of the cosh-Gaussian laser beam with decentered parameter, intensity parameter, magnetic field, and relative density parameter has been studied and strong self-focusing is reported. It is investigated that decentered parameter “b” plays a significant role for the self-focusing of the laser beam as for b=2.12, strong self-focusing is seen. Further, it is observed that extraordinary mode is more prominent toward self-focusing rather than ordinary mode of propagation. For b=2.12, with the increase in the value of magnetic field self-focusing effect, in case of extraordinary mode, becomes very strong under plasma density ramp. Present study may be very useful in the applications like the generation of inertial fusion energy driven by lasers, laser driven accelerators, and x-ray lasers. Moreover, plasma density ramp plays a vital role to enhance the self-focusing effect.

  11. Temporal power spectrum of irradiance fluctuations for a Gaussian-beam wave propagating through non-Kolmogorov turbulence.

    PubMed

    Tan, Liying; Zhai, Chao; Yu, Siyuan; Ma, Jing; Lu, Gaoyuan

    2015-05-04

    In the past decades, both the increasing experimental evidence and some results of theoretical investigation on non-Kolmogorov turbulence have been reported. This has prompted the study of optical propagation in non-Kolmogorov atmospheric turbulence. In this paper, based on the thin phase screen model and a non-Kolmogorov power spectrum which owns a generalized power law instead of standard Kolmogorov power law value 11/3 and a generalized amplitude factor instead of constant value 0.033, the temporal power spectrum of irradiance fluctuations for a Gaussian-beam wave is derived in the weak fluctuation regime for a horizontal path. The analytic expressions are obtained and then used to analyze the influence of spectral power law variations on the temporal power spectrum of irradiance fluctuations.

  12. Comparing flat top and Gaussian focal beam shapes when micromachining steel

    NASA Astrophysics Data System (ADS)

    Lizotte, Todd E.; Ohar, Orest

    2011-10-01

    Laser micromachining, drilling and marking is extensively used within the aerospace, automotive and firearms industries. The unique properties of lasers make them ideal tools for micromachining a wide diversity of materials, including steel alloys [1]. We describe the results of micromachining of low carbon steel and stainless steel alloys, using a high powered diode pumped solid state (DPSS) laser operating at a wavelength of 355nm. The laser was configured with beam conditioning optics to produce either a flat top beam or a Gaussian output which was then sent through a galvanometer scanner and telecentric lens beam delivery system. This paper outlines the interrelationship of process variables when micromachining fine features in steel and stainless steel alloys. Process variables measured included the optimum laser focus plane, energy density, galvanometer scan rate, and pulse overlap and focal spot diameter. Optimum process performance was evaluated based on a dimensional comparison of the micromachined features from each test coupon, including uniformity and surface roughness of the micromachined surface and the minimization of surface irregularities (stalagmite type slag / debris / corn row patterns) and taper angle of the micromachined feature side walls.

  13. Thermal field emission sources and optics for Gaussian electron-beam lithography

    NASA Astrophysics Data System (ADS)

    Chisholm, Tom; Wallman, Bernard A.; Romijn, Johannes C.

    1995-09-01

    The use of Schottky emitters has enabled the designers of Gaussian vector-scan e-beam lithography equipment to meet the ever more stringent demands of the semiconductor industry. Although these emitters are expensive, their long life means that they are economical in total cost. Measurements of the influence of noise on the drives to each element of the Leica EBPG- 5FE column show that the only critical parts are the beam alignment units. Stable, low-noise drivers allow the beam positional noise to be within acceptable limits. A numerical technique has been developed to compute the total spot-size in the presence of spherical and chromatic aberrations and this allows the efficiency of the automatic spot optimization routines of the EBPG-5FE to be examined. The present emitter in the EBPG-5FE in DIMES has been in operation since August 1993 and stable and reproducible performance is obtained. The machine is in constant use for a wide range of tasks.

  14. Efficient independent planar dose calculation for FFF IMRT QA with a bivariate Gaussian source model.

    PubMed

    Li, Feifei; Park, Ji-Yeon; Barraclough, Brendan; Lu, Bo; Li, Jonathan; Liu, Chihray; Yan, Guanghua

    2017-03-01

    The aim of this study is to perform a direct comparison of the source model for photon beams with and without flattening filter (FF) and to develop an efficient independent algorithm for planar dose calculation for FF-free (FFF) intensity-modulated radiotherapy (IMRT) quality assurance (QA). The source model consisted of a point source modeling the primary photons and extrafocal bivariate Gaussian functions modeling the head scatter, monitor chamber backscatter, and collimator exchange effect. The model parameters were obtained by minimizing the difference between the calculated and measured in-air output factors (Sc ). The fluence of IMRT beams was calculated from the source model using a backprojection and integration method. The off-axis ratio in FFF beams were modeled with a fourth degree polynomial. An analytical kernel consisting of the sum of three Gaussian functions was used to describe the dose deposition process. A convolution-based method was used to account for the ionization chamber volume averaging effect when commissioning the algorithm. The algorithm was validated by comparing the calculated planar dose distributions of FFF head-and-neck IMRT plans with measurements performed with a 2D diode array. Good agreement between the measured and calculated Sc was achieved for both FF beams (<0.25%) and FFF beams (<0.10%). The relative contribution of the head-scattered photons reduced by 34.7% for 6 MV and 49.3% for 10 MV due to the removal of the FF. Superior agreement between the calculated and measured dose distribution was also achieved for FFF IMRT. In the gamma comparison with a 2%/2 mm criterion, the average passing rate was 96.2 ± 1.9% for 6 MV FFF and 95.5 ± 2.6% for 10 MV FFF. The efficient independent planar dose calculation algorithm is easy to implement and can be valuable in FFF IMRT QA.

  15. Diffraction of a Gaussian beam by a four-sector binary grating with a shift between adjacent sectors

    NASA Astrophysics Data System (ADS)

    Janicijevic, Lj.; Topuzoski, S.; Stoyanov, L.; Dreischuh, A.

    2017-04-01

    In this article as a diffractive optical element we consider a composed four-sector binary grating under Gaussian laser beam illumination. The angular sectors are bounded by the directions y = x and y = - x , and consist of parts of a binary rectilinear grating; thereby, two neighboring parts are shifted by a half spatial rectilinear grating period. The diffracted wave field amplitude is calculated, showing that the straight-through, zeroth-diffraction-order beam is an amplitude-reduced Gaussian beam, and the higher-diffraction-order beams, deviated with respect to the propagation axis, are non-vortex beams described by modified Bessel functions. The transverse intensity profiles of the higher-diffraction-order beams, numerically and experimentally obtained, have form of a four-leaf clover; they are similar to the Laguerre-Gaussian LG(0,2) beam (with radial mode number n = 0 and azimuthal mode number l = 2) described by circular cosine function, in a paraxial, far-field approximation.

  16. Propagation of higher-order cosh-Gaussian beams in uniaxial crystals orthogonal to the optical axis

    NASA Astrophysics Data System (ADS)

    Li, J.; Chen, Y.; Xin, Y.; Xu, S.

    2010-04-01

    Propagation properties of higher-order cosh-Gaussian (HOCG) beams in uniaxial crystals orthogonal to the optical axis are studied. Analytical formulae for electric fields and kurtosis parameters are derived. Results show that a HOCG beam with larger acentric parameters or beam orders would better preserve its intensity profile when it propagates in uniaxial crystals. At arbitrary propagation distance flat-topped beams can be shaped by selecting appropriate acentric parameters. It is also indicated that kurtosis parameters τx and τy both increase when acentric parameters take larger values, however, they show different behaviors due to effects of anisotropic crystals.

  17. A Gaussian Copula Model for Multivariate Survival Data

    PubMed Central

    Othus, Megan; Li, Yi

    2011-01-01

    We consider a Gaussian copula model for multivariate survival times. Estimation of the copula association parameter is easily implemented with existing software using a two-stage estimation procedure. Using the Gaussian copula, we are able to test whether the association parameter is equal to zero. When the association term is positive, the model can be extended to incorporate cluster-level frailty terms. Asymptotic properties are derived under the two-stage estimation scheme. Simulation studies verify finite sample utility. We apply the method to a Children’s Oncology Group multi-center study of acute lymphoblastic leukemia. The analysis estimates marginal treatment effects and examines potential clustering within treatment institution. PMID:22162742

  18. Research on Bayes matting algorithm based on Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Quan, Wei; Jiang, Shan; Han, Cheng; Zhang, Chao; Jiang, Zhengang

    2015-12-01

    The digital matting problem is a classical problem of imaging. It aims at separating non-rectangular foreground objects from a background image, and compositing with a new background image. Accurate matting determines the quality of the compositing image. A Bayesian matting Algorithm Based on Gaussian Mixture Model is proposed to solve this matting problem. Firstly, the traditional Bayesian framework is improved by introducing Gaussian mixture model. Then, a weighting factor is added in order to suppress the noises of the compositing images. Finally, the effect is further improved by regulating the user's input. This algorithm is applied to matting jobs of classical images. The results are compared to the traditional Bayesian method. It is shown that our algorithm has better performance in detail such as hair. Our algorithm eliminates the noise well. And it is very effectively in dealing with the kind of work, such as interested objects with intricate boundaries.

  19. Mean-field fluid behavior of the gaussian core model

    PubMed

    Louis; Bolhuis; Hansen

    2000-12-01

    We show that the Gaussian core model of particles interacting via a penetrable repulsive Gaussian potential, first considered by Stillinger [J. Chem. Phys. 65, 3968 (1976)], behaves as a weakly correlated "mean-field fluid" over a surprisingly wide density and temperature range. In the bulk, the structure of the fluid phase is accurately described by the random phase approximation for the direct correlation function, and by the more sophisticated hypernetted chain integral equation. The resulting pressure deviates very little from a simple mean-field-like quadratic form in the density, while the low density virial expansion turns out to have an extremely small radius of convergence. Density profiles near a hard wall are also very accurately described by the corresponding mean-field free-energy functional. The binary version of the model exhibits a spinodal instability against demixing at high densities. Possible implications for semidilute polymer solutions are discussed.

  20. Classifying gamma-ray bursts with Gaussian Mixture Model

    NASA Astrophysics Data System (ADS)

    Zhang, Zhi-Bin; Yang, En-Bo; Choi, Chul-Sung; Chang, Heon-Young

    2016-11-01

    Using Gaussian Mixture Model (GMM) and expectation-maximization algorithm, we perform an analysis of time duration (T90) for Compton Gamma Ray Observatory (CGRO)/BATSE, Swift/BAT and Fermi/GBM gamma-ray bursts (GRBs). The T90 distributions of 298 redshift-known Swift/BAT GRBs have also been studied in both observer and rest frames. Bayesian information criterion has been used to compare between different GMM models. We find that two Gaussian components are better to describe the CGRO/BATSE and Fermi/GBM GRBs in the observer frame. Also, we caution that two groups are expected for the Swift/BAT bursts in the rest frame, which is consistent with some previous results. However, Swift GRBs in the observer frame seem to show a trimodal distribution, of which the superficial intermediate class may result from the selection effect of Swift/BAT.

  1. Second harmonic generation by relativistic self-focusing of q-Gaussian laser beam in preformed parabolic plasma channel

    SciTech Connect

    Singh, Arvinder E-mail: naveens222@rediffmail.com; Gupta, Naveen E-mail: naveens222@rediffmail.com

    2015-01-15

    This paper presents an investigation of relativistic self-focusing effect of a q-Gaussian laser beam on second harmonic generation in a preformed parabolic plasma channel. An expression has been derived for density perturbation associated with the plasma wave excited by the laser beam. This in turn acts as a source of second harmonic generation. The moment theory approach has been used to derive a differential equation that governs the evolution of spot size of the laser beam with the distance of propagation. The detailed effects of intensity distribution deviation from Gaussian distribution, intensity of laser beam, density, and depth of the channel have been studied on self-focusing as well as on second harmonic generation.

  2. Stochastic model updating utilizing Bayesian approach and Gaussian process model

    NASA Astrophysics Data System (ADS)

    Wan, Hua-Ping; Ren, Wei-Xin

    2016-03-01

    Stochastic model updating (SMU) has been increasingly applied in quantifying structural parameter uncertainty from responses variability. SMU for parameter uncertainty quantification refers to the problem of inverse uncertainty quantification (IUQ), which is a nontrivial task. Inverse problem solved with optimization usually brings about the issues of gradient computation, ill-conditionedness, and non-uniqueness. Moreover, the uncertainty present in response makes the inverse problem more complicated. In this study, Bayesian approach is adopted in SMU for parameter uncertainty quantification. The prominent strength of Bayesian approach for IUQ problem is that it solves IUQ problem in a straightforward manner, which enables it to avoid the previous issues. However, when applied to engineering structures that are modeled with a high-resolution finite element model (FEM), Bayesian approach is still computationally expensive since the commonly used Markov chain Monte Carlo (MCMC) method for Bayesian inference requires a large number of model runs to guarantee the convergence. Herein we reduce computational cost in two aspects. On the one hand, the fast-running Gaussian process model (GPM) is utilized to approximate the time-consuming high-resolution FEM. On the other hand, the advanced MCMC method using delayed rejection adaptive Metropolis (DRAM) algorithm that incorporates local adaptive strategy with global adaptive strategy is employed for Bayesian inference. In addition, we propose the use of the powerful variance-based global sensitivity analysis (GSA) in parameter selection to exclude non-influential parameters from calibration parameters, which yields a reduced-order model and thus further alleviates the computational burden. A simulated aluminum plate and a real-world complex cable-stayed pedestrian bridge are presented to illustrate the proposed framework and verify its feasibility.

  3. ABCD matrix for reflection and refraction of Gaussian beams at the surface of a parabola of revolution.

    PubMed

    Liu, Hongzhan; Liu, Liren; Xu, Rongwei; Luan, Zhu

    2005-08-10

    We report the formulation of an ABCD matrix for reflection and refraction of Gaussian light beams at the surface of a parabola of revolution that separate media of different refractive indices based on optical phase matching. The equations for the spot sizes and wave-front radii of the beams are also obtained by using theABCD matrix. With these matrices, we can more conveniently design and evaluate some special optical systems, including these kinds of elements.

  4. Goos-Hänchen and Imbert-Fedorov shifts for Gaussian beams impinging on graphene-coated surfaces

    NASA Astrophysics Data System (ADS)

    Grosche, Simon; Ornigotti, Marco; Szameit, Alexander

    2015-11-01

    We present a theoretical study of the Goos-H\\"anchen and Imbert-Fedorov shifts for a fundamental Gaussian beam impinging on a surface coated with a single layer of graphene. We show that the graphene surface conductibility $\\sigma(\\omega)$ is responsible for the appearance of a giant and negative spatial Goos-H\\"anchen shift.

  5. Goos-Hänchen and Imbert-Fedorov shifts for Gaussian beams impinging on graphene-coated surfaces.

    PubMed

    Grosche, Simon; Ornigotti, Marco; Szameit, Alexander

    2015-11-16

    We present a theoretical study of the Goos-Hänchen and Imbert-Fedorov shifts for a fundamental Gaussian beam impinging on a surface coated with a single layer of graphene. We show that the graphene surface conductivity σ(ω) is responsible for the appearance of a giant and negative spatial Goos-Hänchen shift.

  6. Image estimation using doubly stochastic gaussian random field models.

    PubMed

    Woods, J W; Dravida, S; Mediavilla, R

    1987-02-01

    The two-dimensional (2-D) doubly stochastic Gaussian (DSG) model was introduced by one of the authors to provide a complete model for spatial filters which adapt to the local structure in an image signal. Here we present the optimal estimator and 2-D fixed-lag smoother for this DSG model extending earlier work of Ackerson and Fu. As the optimal estimator has an exponentially growing state space, we investigate suboptimal estimators using both a tree and a decision-directed method. Experimental results are presented.

  7. Analysis of EM penetration into and scattering by electrically large open waveguide cavities using Gaussian beam shooting

    NASA Technical Reports Server (NTRS)

    Burkholder, Robert J.; Pathak, Prabhakar H.

    1991-01-01

    Gaussian beam (GB) representation methods are used to analyze the electromagnetic coupling into and the scattering by a large nonuniform cavity. The aperture field in the cavity is decomposed into beams using the Gabor expansion, and shooting techniques are then employed. The method is illustrated only for the two-dimensional (2-D) case. The GBs are tracked axially using the rules of beam optics which ignore any beam distortion upon reflection at the walls. The effects of beam distortion are not significant for relatively slowly varying waveguide cavities. The field scattered into the exterior by the termination within the cavity is found using a reciprocity integral formulation which requires a knowledge of the beam fields near the termination. Numerical results based on this GB approach are presented and compared with results based on an independent reference solution.

  8. Approximate analytical solution for waveguide excitation of a plane dielectric layer by a Gaussian beam at frustrated total internal reflection.

    PubMed

    Serdyuk, Vladimir; Rudnitsky, Anton

    2015-05-01

    We present an approximate 2D asymptotic analytic theory of light field excitation in a plane thin dielectric layer under conditions of frustrated total internal reflection, when an inclined Gaussian beam, falling from a triangular prism, excites a decaying field in air spacing between a prism and a plane dielectric. Ignoring the radiation scattering on the sharp edges of a prism, we have obtained the formulas that allow us to compute spatial structures of an electromagnetic field in every point of space and to estimate the integral efficiency of waveguide mode excitation in a plane dielectric layer and the total energy of a reflected beam. It is shown that the width of an initial Gaussian beam has an effect on waveguide mode intensity.

  9. Evolution of coherence singularities of Schell-model beams.

    PubMed

    Rodrigo, José A; Alieva, Tatiana

    2015-08-01

    We show that the propagation of the widely used Schell-model partially coherent light can be easily understood using the ambiguity function. This approach is especially beneficial for the analysis of the mutual intensity of Schell-model beams (SMBs), which are associated with stable coherent beams such as Laguerre-, Hermite-, and Ince-Gaussian. We study the evolution of the coherence singularities during the SMB propagation. It is demonstrated that the distance of singularity formation depends on the coherence degree of the input beam. Moreover, it is proved that the shape, position, and number of singularity curves in far field are defined by the associated coherent beam.

  10. Beat wave excitation of electron plasma wave by relativistic cross focusing of cosh-Gaussian laser beams in plasma

    NASA Astrophysics Data System (ADS)

    Singh, Arvinder; Gupta, Naveen

    2015-06-01

    A scheme for beat wave excitation of electron plasma wave (EPW) is proposed by relativistic cross-focusing of two coaxial Cosh-Gaussian (ChG) laser beams in an under dense plasma. The plasma wave is generated on account of beating of two coaxial laser beams of frequencies ω1 and ω2 . The mechanism for laser produced nonlinearity is assumed to be relativistic nonlinearity in electron mass. Following moment theory approach in Wentzel Kramers Brillouin (W.K.B) approximation, the coupled differential equations governing the evolution of spot size of laser beams with distance of propagation have been derived. The relativistic nonlinearity depends not only on the intensity of first laser beam but also on the intensity of second laser beam. Therefore, propagation dynamics of one laser beam affect that of second beam and hence cross-focusing of the two laser beams takes place. Due to non uniform intensity distribution of pump laser beams, the background electron concentration gets modified. The amplitude of EPW, which depends on the background electron concentration, thus gets nonlinearly coupled with the laser beams. The effects of relativistic electron mass nonlinearity and the cross-focusing of pump beams on excitation of EPW have been incorporated. Numerical simulations have been carried out to investigate the effect of laser as well as plasma parameters on cross-focusing of laser beams and further its effect on power of excited EPW.

  11. Contribution of High-Order Rainbows to the Scattering of a Gaussian Laser Beam by a Spherical Particle

    NASA Technical Reports Server (NTRS)

    Lock, James A.

    1993-01-01

    I review the theory of the scattering of a Gaussian laser beam by a dielectric spherical particle and give the details for constructing a computer program to implement the theory. Computational results indicate that if the width of the laser beam is much less than the diameter of the particle and if the axis of the beam is incident near the edge of the particle, the fifth-, sixth-, and ninth-order rainbows should be evident in the far-field scattered intensity. I performed an experiment that yielded tentative evidence for the presence of the sixth- order rainbow.

  12. Parameter Optimization for the Gaussian Model of Folded Proteins

    NASA Astrophysics Data System (ADS)

    Erman, Burak; Erkip, Albert

    2000-03-01

    Recently, we proposed an analytical model of protein folding (B. Erman, K. A. Dill, J. Chem. Phys, 112, 000, 2000) and showed that this model successfully approximates the known minimum energy configurations of two dimensional HP chains. All attractions (covalent and non-covalent) as well as repulsions were treated as if the monomer units interacted with each other through linear spring forces. Since the governing potential of the linear springs are derived from a Gaussian potential, the model is called the ''Gaussian Model''. The predicted conformations from the model for the hexamer and various 9mer sequences all lie on the square lattice, although the model does not contain information about the lattice structure. Results of predictions for chains with 20 or more monomers also agreed well with corresponding known minimum energy lattice structures. However, these predicted conformations did not lie exactly on the square lattice. In the present work, we treat the specific problem of optimizing the potentials (the strengths of the spring constants) so that the predictions are in better agreement with the known minimum energy structures.

  13. Molecular Code Division Multiple Access: Gaussian Mixture Modeling

    NASA Astrophysics Data System (ADS)

    Zamiri-Jafarian, Yeganeh

    Communications between nano-devices is an emerging research field in nanotechnology. Molecular Communication (MC), which is a bio-inspired paradigm, is a promising technique for communication in nano-network. In MC, molecules are administered to exchange information among nano-devices. Due to the nature of molecular signals, traditional communication methods can't be directly applied to the MC framework. The objective of this thesis is to present novel diffusion-based MC methods when multi nano-devices communicate with each other in the same environment. A new channel model and detection technique, along with a molecular-based access method, are proposed in here for communication between asynchronous users. In this work, the received molecular signal is modeled as a Gaussian mixture distribution when the MC system undergoes Brownian noise and inter-symbol interference (ISI). This novel approach demonstrates a suitable modeling for diffusion-based MC system. Using the proposed Gaussian mixture model, a simple receiver is designed by minimizing the error probability. To determine an optimum detection threshold, an iterative algorithm is derived which minimizes a linear approximation of the error probability function. Also, a memory-based receiver is proposed to improve the performance of the MC system by considering previously detected symbols in obtaining the threshold value. Numerical evaluations reveal that theoretical analysis of the bit error rate (BER) performance based on the Gaussian mixture model match simulation results very closely. Furthermore, in this thesis, molecular code division multiple access (MCDMA) is proposed to overcome the inter-user interference (IUI) caused by asynchronous users communicating in a shared propagation environment. Based on the selected molecular codes, a chip detection scheme with an adaptable threshold value is developed for the MCDMA system when the proposed Gaussian mixture model is considered. Results indicate that the

  14. Generic inference of inflation models by local non-Gaussianity

    NASA Astrophysics Data System (ADS)

    Dorn, Sebastian; Ramirez, Erandy; Kunze, Kerstin E.; Hofmann, Stefan; Enßlin, Torsten A.

    2014-05-01

    The presence of multiple fields during inflation might seed a detectable amount of non-Gaussianity in the curvature perturbations, which in turn becomes observable in present data sets like the cosmic microwave background (CMB) or the large scale structure (LSS). Within this proceeding we present a fully analytic method to infer inflationary parameters from observations by exploiting higher-order statistics of the curvature perturbations. To keep this analyticity, and thereby to dispense with numerically expensive sampling techniques, a saddle-point approximation is introduced whose precision has been validated for a numerical toy example. Applied to real data, this approach might enable to discriminate among the still viable models of inflation.

  15. Gaussian-Schell model sources in one-dimensional first-order systems with loss or gain.

    PubMed

    Kauderer, M

    1993-02-20

    A detailed examination of the propagation of Gaussian-Schell model sources in one-dimensional, possibly nonlossless, first-order systems is constructed. The laws of focusing are derived. The conditions for periodicity of the Gaussian-Schell model source are derived. This result generalizes the well-known result -2 Gaussian beam to the partially coherent nonlossless case. When loss or gain is present several conditions must be satisfied simultaneously for periodicity. The self-consistent solutions are derived and the perturbation stability of the solutions is studied. A physical realization of an arbitrary nonlossless one-dimensional ABCD system is derived, which yields a convenient formula for deciding whether the ABCD system has loss or gain. Special attention is devoted to real and ripple systems.

  16. a Gaussian Process Based Multi-Person Interaction Model

    NASA Astrophysics Data System (ADS)

    Klinger, T.; Rottensteiner, F.; Heipke, C.

    2016-06-01

    Online multi-person tracking in image sequences is commonly guided by recursive filters, whose predictive models define the expected positions of future states. When a predictive model deviates too much from the true motion of a pedestrian, which is often the case in crowded scenes due to unpredicted accelerations, the data association is prone to fail. In this paper we propose a novel predictive model on the basis of Gaussian Process Regression. The model takes into account the motion of every tracked pedestrian in the scene and the prediction is executed with respect to the velocities of all interrelated persons. As shown by the experiments, the model is capable of yielding more plausible predictions even in the presence of mutual occlusions or missing measurements. The approach is evaluated on a publicly available benchmark and outperforms other state-of-the-art trackers.

  17. Direct Simulation of Multiple Scattering by Discrete Random Media Illuminated by Gaussian Beams

    NASA Technical Reports Server (NTRS)

    Mackowski, Daniel W.; Mishchenko, Michael I.

    2011-01-01

    The conventional orientation-averaging procedure developed in the framework of the superposition T-matrix approach is generalized to include the case of illumination by a Gaussian beam (GB). The resulting computer code is parallelized and used to perform extensive numerically exact calculations of electromagnetic scattering by volumes of discrete random medium consisting of monodisperse spherical particles. The size parameters of the scattering volumes are 40, 50, and 60, while their packing density is fixed at 5%. We demonstrate that all scattering patterns observed in the far-field zone of a random multisphere target and their evolution with decreasing width of the incident GB can be interpreted in terms of idealized theoretical concepts such as forward-scattering interference, coherent backscattering (CB), and diffuse multiple scattering. It is shown that the increasing violation of electromagnetic reciprocity with decreasing GB width suppresses and eventually eradicates all observable manifestations of CB. This result supplements the previous demonstration of the effects of broken reciprocity in the case of magneto-optically active particles subjected to an external magnetic field.

  18. Acoustic streaming, fluid mixing, and particle transport by a Gaussian ultrasound beam in a cylindrical container

    SciTech Connect

    Marshall, Jeffrey S.; Wu, Junru

    2015-10-15

    A computational study is reported of the acoustic streaming flow field generated by a Gaussian ultrasound beam propagating normally toward the end wall of a cylindrical container. Particular focus is given to examining the effectiveness of the acoustic streaming flow for fluid mixing within the container, for deposition of particles in suspension onto the bottom surface, and for particle suspension from the bottom surface back into the flow field. The flow field is assumed to be axisymmetric with the ultrasound transducer oriented parallel to the cylinder axis and normal to the bottom surface of the container, which we refer to as the impingement surface. Reflection of the sound from the impingement surface and sound absorption within the material at the container bottom are both accounted for in the computation. The computation also accounts for thermal buoyancy force due to ultrasonic heating of the impingement surface, but over the time period considered in the current simulations, the flow is found to be dominated by the acoustic streaming force, with only moderate effect of buoyancy force.

  19. Phase diagram of the Gaussian-core model.

    PubMed

    Prestipino, Santi; Saija, Franz; Giaquinta, Paolo V

    2005-05-01

    We trace with high numerical accuracy the phase diagram of the Gaussian-core model, a classical system of point particles interacting via a Gaussian-shaped, purely repulsive potential. This model, which provides a reliable qualitative description of the thermal behavior of interpenetrable globular polymers, is known to exhibit a polymorphic fcc-bcc transition at low densities and reentrant melting at high densities. Extensive Monte Carlo simulations, carried out in conjunction with accurate calculations of the solid free energies, lead to a thermodynamic scenario that is partially modified with respect to previous knowledge. In particular, we find that: (i) the fluid-bcc-fcc triple-point temperature is about one third of the maximum freezing temperature; (ii) upon isothermal compression, the model exhibits a fluid-bcc-fcc-bcc-fluid sequence of phases in a narrow range of temperatures just above the triple point. We discuss these results in relation to the behavior of star-polymer solutions and of other softly repulsive systems.

  20. Beyond Gaussians: a study of single-spot modeling for scanning proton dose calculation.

    PubMed

    Li, Yupeng; Zhu, Ronald X; Sahoo, Narayan; Anand, Aman; Zhang, Xiaodong

    2012-02-21

    Active spot scanning proton therapy is becoming increasingly adopted by proton therapy centers worldwide. Unlike passive-scattering proton therapy, active spot scanning proton therapy, especially intensity-modulated proton therapy, requires proper modeling of each scanning spot to ensure accurate computation of the total dose distribution contributed from a large number of spots. During commissioning of the spot scanning gantry at the Proton Therapy Center in Houston, it was observed that the long-range scattering protons in a medium may have been inadequately modeled for high-energy beams by a commercial treatment planning system, which could lead to incorrect prediction of field size effects on dose output. In this study, we developed a pencil beam algorithm for scanning proton dose calculation by focusing on properly modeling individual scanning spots. All modeling parameters required by the pencil beam algorithm can be generated based solely on a few sets of measured data. We demonstrated that low-dose halos in single-spot profiles in the medium could be adequately modeled with the addition of a modified Cauchy-Lorentz distribution function to a double-Gaussian function. The field size effects were accurately computed at all depths and field sizes for all energies, and good dose accuracy was also achieved for patient dose verification. The implementation of the proposed pencil beam algorithm also enabled us to study the importance of different modeling components and parameters at various beam energies. The results of this study may be helpful in improving dose calculation accuracy and simplifying beam commissioning and treatment planning processes for spot scanning proton therapy.

  1. Beyond Gaussians: a study of single spot modeling for scanning proton dose calculation

    PubMed Central

    Li, Yupeng; Zhu, Ronald X.; Sahoo, Narayan; Anand, Aman; Zhang, Xiaodong

    2013-01-01

    Active spot scanning proton therapy is becoming increasingly adopted by proton therapy centers worldwide. Unlike passive-scattering proton therapy, active spot scanning proton therapy, especially intensity-modulated proton therapy, requires proper modeling of each scanning spot to ensure accurate computation of the total dose distribution contributed from a large number of spots. During commissioning of the spot scanning gantry at the Proton Therapy Center in Houston, it was observed that the long-range scattering protons in a medium may have been inadequately modeled for high-energy beams by a commercial treatment planning system, which could lead to incorrect prediction of field-size effects on dose output. In the present study, we developed a pencil-beam algorithm for scanning-proton dose calculation by focusing on properly modeling individual scanning spots. All modeling parameters required by the pencil-beam algorithm can be generated based solely on a few sets of measured data. We demonstrated that low-dose halos in single-spot profiles in the medium could be adequately modeled with the addition of a modified Cauchy-Lorentz distribution function to a double-Gaussian function. The field-size effects were accurately computed at all depths and field sizes for all energies, and good dose accuracy was also achieved for patient dose verification. The implementation of the proposed pencil beam algorithm also enabled us to study the importance of different modeling components and parameters at various beam energies. The results of this study may be helpful in improving dose calculation accuracy and simplifying beam commissioning and treatment planning processes for spot scanning proton therapy. PMID:22297324

  2. Characterization of Laser Beam Quality.

    DTIC Science & Technology

    1982-12-01

    proposed a lens-less method to determine beam divergence of Gaussian -shaped laser beams. The propagation of a Gaussian beam is shown in figure 8. Given...irradiance profile of laser beams, a numerical model was developed to simulate the propagation of nondif- fraction-limited laser beams. The function of...In developing the computer model , the incident field 30 *°" [(x, 12. :h e--27,1, is assumed to be Gaussian in intensity, truncated by an aper- ture

  3. BEAMS3D Neutral Beam Injection Model

    NASA Astrophysics Data System (ADS)

    McMillan, Matthew; Lazerson, Samuel A.

    2014-09-01

    With the advent of applied 3D fields in Tokamaks and modern high performance stellarators, a need has arisen to address non-axisymmetric effects on neutral beam heating and fueling. We report on the development of a fully 3D neutral beam injection (NBI) model, BEAMS3D, which addresses this need by coupling 3D equilibria to a guiding center code capable of modeling neutral and charged particle trajectories across the separatrix and into the plasma core. Ionization, neutralization, charge-exchange, viscous slowing down, and pitch angle scattering are modeled with the ADAS atomic physics database. Elementary benchmark calculations are presented to verify the collisionless particle orbits, NBI model, frictional drag, and pitch angle scattering effects. A calculation of neutral beam heating in the NCSX device is performed, highlighting the capability of the code to handle 3D magnetic fields. Notice: this manuscript has been authored by Princeton University under Contract Number DE-AC02-09CH11466 with the US Department of Energy. The United States Government retains and the publisher, by accepting the article for publication, acknowledges that the United States Government retains a non-exclusive, paid-up, irrevocable, world-wide license to publish or reproduce the published form of this manuscript, or allow others to do so, for United States Government purposes.

  4. A Gaussian graphical model approach to climate networks

    SciTech Connect

    Zerenner, Tanja; Friederichs, Petra; Hense, Andreas; Lehnertz, Klaus

    2014-06-15

    Distinguishing between direct and indirect connections is essential when interpreting network structures in terms of dynamical interactions and stability. When constructing networks from climate data the nodes are usually defined on a spatial grid. The edges are usually derived from a bivariate dependency measure, such as Pearson correlation coefficients or mutual information. Thus, the edges indistinguishably represent direct and indirect dependencies. Interpreting climate data fields as realizations of Gaussian Random Fields (GRFs), we have constructed networks according to the Gaussian Graphical Model (GGM) approach. In contrast to the widely used method, the edges of GGM networks are based on partial correlations denoting direct dependencies. Furthermore, GRFs can be represented not only on points in space, but also by expansion coefficients of orthogonal basis functions, such as spherical harmonics. This leads to a modified definition of network nodes and edges in spectral space, which is motivated from an atmospheric dynamics perspective. We construct and analyze networks from climate data in grid point space as well as in spectral space, and derive the edges from both Pearson and partial correlations. Network characteristics, such as mean degree, average shortest path length, and clustering coefficient, reveal that the networks posses an ordered and strongly locally interconnected structure rather than small-world properties. Despite this, the network structures differ strongly depending on the construction method. Straightforward approaches to infer networks from climate data while not regarding any physical processes may contain too strong simplifications to describe the dynamics of the climate system appropriately.

  5. Fuzzy local Gaussian mixture model for brain MR image segmentation.

    PubMed

    Ji, Zexuan; Xia, Yong; Sun, Quansen; Chen, Qiang; Xia, Deshen; Feng, David Dagan

    2012-05-01

    Accurate brain tissue segmentation from magnetic resonance (MR) images is an essential step in quantitative brain image analysis. However, due to the existence of noise and intensity inhomogeneity in brain MR images, many segmentation algorithms suffer from limited accuracy. In this paper, we assume that the local image data within each voxel's neighborhood satisfy the Gaussian mixture model (GMM), and thus propose the fuzzy local GMM (FLGMM) algorithm for automated brain MR image segmentation. This algorithm estimates the segmentation result that maximizes the posterior probability by minimizing an objective energy function, in which a truncated Gaussian kernel function is used to impose the spatial constraint and fuzzy memberships are employed to balance the contribution of each GMM. We compared our algorithm to state-of-the-art segmentation approaches in both synthetic and clinical data. Our results show that the proposed algorithm can largely overcome the difficulties raised by noise, low contrast, and bias field, and substantially improve the accuracy of brain MR image segmentation.

  6. The Gaussian streaming model and convolution Lagrangian effective field theory

    NASA Astrophysics Data System (ADS)

    Vlah, Zvonimir; Castorina, Emanuele; White, Martin

    2016-12-01

    We update the ingredients of the Gaussian streaming model (GSM) for the redshift-space clustering of biased tracers using the techniques of Lagrangian perturbation theory, effective field theory (EFT) and a generalized Lagrangian bias expansion. After relating the GSM to the cumulant expansion, we present new results for the real-space correlation function, mean pairwise velocity and pairwise velocity dispersion including counter terms from EFT and bias terms through third order in the linear density, its leading derivatives and its shear up to second order. We discuss the connection to the Gaussian peaks formalism. We compare the ingredients of the GSM to a suite of large N-body simulations, and show the performance of the theory on the low order multipoles of the redshift-space correlation function and power spectrum. We highlight the importance of a general biasing scheme, which we find to be as important as higher-order corrections due to non-linear evolution for the halos we consider on the scales of interest to us.

  7. Gaussian beam radius measurement with a knife-edge: a polynomial approximation to the inverse error function.

    PubMed

    González-Cardel, Mario; Arguijo, Pedro; Díaz-Uribe, Rufino

    2013-06-01

    A method for approximating the inverse error function involved in the determination of the radius of a Gaussian beam is proposed. It is based on a polynomial inversion that can be developed to any desired degree, according to an a priori defined error budget. Analytic expressions are obtained and used to determine the radius of a TEM(oo) He-Ne laser beam from intensity measurements experimentally obtained by using the knife edge method. The error and the interval of validity of the approximation are determined for polynomials of different degrees. The analysis of the theoretical and experimental errors is also presented.

  8. Propagation properties of partially coherent electromagnetic hyperbolic-sine-Gaussian vortex beams through non-Kolmogorov turbulence.

    PubMed

    Huang, Yongping; Wang, Fanhou; Gao, Zenghui; Zhang, Bin

    2015-01-26

    Propagation properties of partially coherent electromagnetic hyperbolic-sine-Gaussian (PCESHG) vortex beams through non-Kolmogorov atmospheric turbulence, including the spectral degree of polarization and evolution behavior of coherent vortices and average intensity are investigated in detail by using the extended Huygens-Fresnel principle and the spatial power spectrum of the refractive index of non-Kolmogorov turbulence. It is shown that the motion, creation and annihilation of the coherent vortices of PCESHG vortex beams in non-Kolmogorov turbulence may appear with the increasing propagation distance, and the distance for the conservation of the topological charge depends on the turbulence parameters and beam parameters. In additions, the evolution behavior of coherent vortices, average intensity and spectral degree of polarization vary significantly for different values of the generalized exponent parameter and the generalized refractive-index structure parameter of non-Kolmogorov turbulence, and the beam parameters as well as the propagation distance.

  9. Gaussian Process for Activity Modeling and Anomaly Detection

    NASA Astrophysics Data System (ADS)

    Liao, W.; Rosenhahn, B.; Yang, M. Ying

    2015-08-01

    Complex activity modeling and identification of anomaly is one of the most interesting and desired capabilities for automated video behavior analysis. A number of different approaches have been proposed in the past to tackle this problem. There are two main challenges for activity modeling and anomaly detection: 1) most existing approaches require sufficient data and supervision for learning; 2) the most interesting abnormal activities arise rarely and are ambiguous among typical activities, i.e. hard to be precisely defined. In this paper, we propose a novel approach to model complex activities and detect anomalies by using non-parametric Gaussian Process (GP) models in a crowded and complicated traffic scene. In comparison with parametric models such as HMM, GP models are nonparametric and have their advantages. Our GP models exploit implicit spatial-temporal dependence among local activity patterns. The learned GP regression models give a probabilistic prediction of regional activities at next time interval based on observations at present. An anomaly will be detected by comparing the actual observations with the prediction at real time. We verify the effectiveness and robustness of the proposed model on the QMUL Junction Dataset. Furthermore, we provide a publicly available manually labeled ground truth of this data set.

  10. Gaussian-Charge Polarizable and Nonpolarizable Models for CO2.

    PubMed

    Jiang, Hao; Moultos, Othonas A; Economou, Ioannis G; Panagiotopoulos, Athanassios Z

    2016-02-11

    A polarizable intermolecular potential model using three classical Drude oscillators on the atomic sites has been developed for CO2. The model is rigid with bond lengths and molecular geometries set to their experimental values. Electrostatic interactions are represented by three Gaussian charges connected to the molecular frame by harmonic springs. Nonelectrostatic interactions are represented by the Buckingham exponential-6 potential, with potential parameters optimized to vapor-liquid equilibria (VLE) data. A nonpolarizable CO2 model that shares the other ingredients of the polarizable model was also developed and optimized to VLE data. Gibbs ensemble Monte Carlo and molecular dynamics simulations were used to evaluate the two models with respect to a variety of thermodynamic and transport properties, including the enthalpy of vaporization, second virial coefficient, density in the one-phase fluid region, isobaric and isochoric heat capacities, radial distribution functions, self-diffusion coefficient, and shear viscosity. Excellent agreement between model predictions and experimental data was found for all properties studied. The polarizable and nonpolarizable models provide a similar representation of CO2 properties, which indicates that the properties of pure CO2 fluid are not strongly affected by polarization. The polarizable model, which has an order of magnitude higher computational cost than the nonpolarizable model, will likely be useful for the study of a mixture of CO2 and polar components for which polarization is important.

  11. Average intensity and spreading of partially coherent model beams propagating in a turbulent biological tissue

    NASA Astrophysics Data System (ADS)

    Wu, Yuqian; Zhang, Yixin; Wang, Qiu; Hu, Zhengda

    2016-11-01

    For Gaussian beams with three different partially coherent models, including Gaussian-Schell model (GSM), Laguerre-Gaussian Schell-model (LGSM) and Bessel-Gaussian Schell-model (BGSM) beams propagating through a biological turbulent tissue, the expression of the spatial coherence radius of a spherical wave propagating in a turbulent biological tissue, and the average intensity and beam spreading for GSM, LGSM and BGSM beams are derived based on the fractal model of power spectrum of refractive-index variations in biological tissue. Effects of partially coherent model and parameters of biological turbulence on such beams are studied in numerical simulations. Our results reveal that the spreading of GSM beams is smaller than LGSM and BGSM beams on the same conditions, and the beam with larger source coherence width has smaller beam spreading than that with smaller coherence width. The results are useful for any applications involved light beam propagation through tissues, especially the cases where the average intensity and spreading properties of the light should be taken into account to evaluate the system performance and investigations in the structures of biological tissue.

  12. Efficient speaker verification using Gaussian mixture model component clustering.

    SciTech Connect

    De Leon, Phillip L.; McClanahan, Richard D.

    2012-04-01

    In speaker verification (SV) systems that employ a support vector machine (SVM) classifier to make decisions on a supervector derived from Gaussian mixture model (GMM) component mean vectors, a significant portion of the computational load is involved in the calculation of the a posteriori probability of the feature vectors of the speaker under test with respect to the individual component densities of the universal background model (UBM). Further, the calculation of the sufficient statistics for the weight, mean, and covariance parameters derived from these same feature vectors also contribute a substantial amount of processing load to the SV system. In this paper, we propose a method that utilizes clusters of GMM-UBM mixture component densities in order to reduce the computational load required. In the adaptation step we score the feature vectors against the clusters and calculate the a posteriori probabilities and update the statistics exclusively for mixture components belonging to appropriate clusters. Each cluster is a grouping of multivariate normal distributions and is modeled by a single multivariate distribution. As such, the set of multivariate normal distributions representing the different clusters also form a GMM. This GMM is referred to as a hash GMM which can be considered to a lower resolution representation of the GMM-UBM. The mapping that associates the components of the hash GMM with components of the original GMM-UBM is referred to as a shortlist. This research investigates various methods of clustering the components of the GMM-UBM and forming hash GMMs. Of five different methods that are presented one method, Gaussian mixture reduction as proposed by Runnall's, easily outperformed the other methods. This method of Gaussian reduction iteratively reduces the size of a GMM by successively merging pairs of component densities. Pairs are selected for merger by using a Kullback-Leibler based metric. Using Runnal's method of reduction, we were able

  13. Comment on “Stationary self-focusing of Gaussian laser beam in relativistic thermal quantum plasma” [Phys. Plasmas 20, 072703 (2013)

    SciTech Connect

    Habibi, M.; Ghamari, F.

    2014-06-15

    Patil and Takale in their recent article [Phys. Plasmas 20, 072703 (2013)], by evaluating the quantum dielectric response in thermal quantum plasma, have modeled the relativistic self-focusing of Gaussian laser beam in a plasma. We have found that there are some important shortcomings and fundamental mistakes in Patil and Takale [Phys. Plasmas 20, 072703 (2013)] that we give a brief description about them and refer readers to important misconception about the use of the Fermi temperature in quantum plasmas, appearing in Patil and Takale [Phys. Plasmas 20, 072703 (2013)].

  14. Thermodynamical Limit for Correlated Gaussian Random Energy Models

    NASA Astrophysics Data System (ADS)

    Contucci, P.; Esposti, M. Degli; Giardinà, C.; Graffi, S.

    Let {EΣ(N)}ΣΣN be a family of |ΣN|=2N centered unit Gaussian random variables defined by the covariance matrix CN of elements cN(Σ,τ):=Av(EΣ(N)Eτ(N)) and the corresponding random Hamiltonian. Then the quenched thermodynamical limit exists if, for every decomposition N=N1+N2, and all pairs (Σ,τ)ΣN×ΣN: where πk(Σ),k=1,2 are the projections of ΣΣN into ΣNk. The condition is explicitly verified for the Sherrington-Kirkpatrick, the even p-spin, the Derrida REM and the Derrida-Gardner GREM models.

  15. Monte Carlo evaluation of biological variation: Random generation of correlated non-Gaussian model parameters

    NASA Astrophysics Data System (ADS)

    Hertog, Maarten L. A. T. M.; Scheerlinck, Nico; Nicolaï, Bart M.

    2009-01-01

    When modelling the behaviour of horticultural products, demonstrating large sources of biological variation, we often run into the issue of non-Gaussian distributed model parameters. This work presents an algorithm to reproduce such correlated non-Gaussian model parameters for use with Monte Carlo simulations. The algorithm works around the problem of non-Gaussian distributions by transforming the observed non-Gaussian probability distributions using a proposed SKN-distribution function before applying the covariance decomposition algorithm to generate Gaussian random co-varying parameter sets. The proposed SKN-distribution function is based on the standard Gaussian distribution function and can exhibit different degrees of both skewness and kurtosis. This technique is demonstrated using a case study on modelling the ripening of tomato fruit evaluating the propagation of biological variation with time.

  16. Analysis of the EM scattering from arbitrary open-ended waveguide cavities using axial Gaussian Beam tracking

    NASA Technical Reports Server (NTRS)

    Burkholder, R. J.; Pathak, P. H.

    1988-01-01

    The electromagnetic (EM) scattering from a planar termination located inside relatively arbitrarily shaped open-ended waveguide cavities with smoothly curved interior walls is analyzed using a Gaussian Beam (GB) expansion of the incident plane wave fields in the open end. The cavities under consideration may contain perfectly-conducting interior walls with or without a thin layer of material coating, or the walls may be characterized by an impedance boundary condition. In the present approach, the GB's are tracked only to the termination of the waveguide cavity via beam reflections from interior waveguide cavity walls. The Gaussian beams are tracked approximately only along their beam axes; this approximation which remains valid for relatively well focussed beams assumes that an incident GB gives rise to a reflected GB with parameters related to the incident beam and the radius of curvature of the wall. It is found that this approximation breaks down for GB's which come close to grazing a convex surface and when the width of the incident beam is comparable to the radius of curvature of the surface. The expansion of the fields at the open end depend on the incidence angle only through the expansion coefficients, so the GB's need to be tracked through the waveguide cavity only once for a wide range of incidence angles. At the termination, the sum of all the GB's are integrated using a result developed from a generalized reciprocity principle, to give the fields scattered from the interior of the cavity. The rim edge at the open end of the cavity is assumed to be sharp and the external scattering from the rim is added separately using Geometrical Theory of Diffraction. The results based on the present approach are compared with solutions based on the hybrid asymptotic modal method. The agreement is found to be very good for cavities made up of planar surfaces, and also for cavities with curved surfaces which are not too long with respect to their width.

  17. Comparisons of Non-Gaussian Statistical Models in DNA Methylation Analysis

    PubMed Central

    Ma, Zhanyu; Teschendorff, Andrew E.; Yu, Hong; Taghia, Jalil; Guo, Jun

    2014-01-01

    As a key regulatory mechanism of gene expression, DNA methylation patterns are widely altered in many complex genetic diseases, including cancer. DNA methylation is naturally quantified by bounded support data; therefore, it is non-Gaussian distributed. In order to capture such properties, we introduce some non-Gaussian statistical models to perform dimension reduction on DNA methylation data. Afterwards, non-Gaussian statistical model-based unsupervised clustering strategies are applied to cluster the data. Comparisons and analysis of different dimension reduction strategies and unsupervised clustering methods are presented. Experimental results show that the non-Gaussian statistical model-based methods are superior to the conventional Gaussian distribution-based method. They are meaningful tools for DNA methylation analysis. Moreover, among several non-Gaussian methods, the one that captures the bounded nature of DNA methylation data reveals the best clustering performance. PMID:24937687

  18. Gaussian and Lognormal Models of Hurricane Gust Factors

    NASA Technical Reports Server (NTRS)

    Merceret, Frank

    2009-01-01

    A document describes a tool that predicts the likelihood of land-falling tropical storms and hurricanes exceeding specified peak speeds, given the mean wind speed at various heights of up to 500 feet (150 meters) above ground level. Empirical models to calculate mean and standard deviation of the gust factor as a function of height and mean wind speed were developed in Excel based on data from previous hurricanes. Separate models were developed for Gaussian and offset lognormal distributions for the gust factor. Rather than forecasting a single, specific peak wind speed, this tool provides a probability of exceeding a specified value. This probability is provided as a function of height, allowing it to be applied at a height appropriate for tall structures. The user inputs the mean wind speed, height, and operational threshold. The tool produces the probability from each model that the given threshold will be exceeded. This application does have its limits. They were tested only in tropical storm conditions associated with the periphery of hurricanes. Winds of similar speed produced by non-tropical system may have different turbulence dynamics and stability, which may change those winds statistical characteristics. These models were developed along the Central Florida seacoast, and their results may not accurately extrapolate to inland areas, or even to coastal sites that are different from those used to build the models. Although this tool cannot be generalized for use in different environments, its methodology could be applied to those locations to develop a similar tool tuned to local conditions.

  19. Bayesian Gaussian Mixture Models for High-Density Genotyping Arrays

    PubMed Central

    Sabatti, Chiara; Lange, Kenneth

    2011-01-01

    Affymetrix's SNP (single-nucleotide polymorphism) genotyping chips have increased the scope and decreased the cost of gene-mapping studies. Because each SNP is queried by multiple DNA probes, the chips present interesting challenges in genotype calling. Traditional clustering methods distinguish the three genotypes of an SNP fairly well given a large enough sample of unrelated individuals or a training sample of known genotypes. This article describes our attempt to improve genotype calling by constructing Gaussian mixture models with empirically derived priors. The priors stabilize parameter estimation and borrow information collectively gathered on tens of thousands of SNPs. When data from related family members are available, our models capture the correlations in signals between relatives. With these advantages in mind, we apply the models to Affymetrix probe intensity data on 10,000 SNPs gathered on 63 genotyped individuals spread over eight pedigrees. We integrate the genotype-calling model with pedigree analysis and examine a sequence of symmetry hypotheses involving the correlated probe signals. The symmetry hypotheses raise novel mathematical issues of parameterization. Using the Bayesian information criterion, we select the best combination of symmetry assumptions. Compared to Affymetrix's software, our model leads to a reduction in no-calls with little sacrifice in overall calling accuracy. PMID:21572926

  20. Model-Based Visual Self-localization Using Gaussian Spheres

    NASA Astrophysics Data System (ADS)

    Gonzalez-Aguirre, David; Asfour, Tamim; Bayro-Corrochano, Eduardo; Dillmann, Ruediger

    A novel model-based approach for global self-localization using active stereo vision and density Gaussian spheres is presented. The proposed object recognition components deliver noisy percept subgraphs, which are filtered and fused into an ego-centered reference frame. In subsequent stages, the required vision-to-model associations are extracted by selecting ego-percept subsets in order to prune and match the corresponding world-model subgraph. Ideally, these coupled subgraphs hold necessary information to obtain the model-to-world transformation, i.e., the pose of the robot. However, the estimation of the pose is not robust due to the uncertainties introduced when recovering Euclidean metric from images and during the mapping from the camera to the ego-center. The approach models the uncertainty of the percepts with a radial normal distribution. This formulation allows a closed-form solution which not only derives the maximal density position depicting the optimal ego-center but also ensures the solution even in situations where pure geometric spheres might not intersect.

  1. Propagation of an optical vortex carried by a partially coherent Laguerre-Gaussian beam in turbulent ocean.

    PubMed

    Cheng, Mingjian; Guo, Lixin; Li, Jiangting; Huang, Qingqing; Cheng, Qi; Zhang, Dan

    2016-06-10

    The analytical formulas for the orbital angular momentum (OAM) mode probability density, signal OAM mode detection probability, and spiral spectrum of partially coherent Laguerre-Gaussian (LG) beams with optical vortices propagation in weak horizontal oceanic turbulent channels were developed, based on the Rytov approximation theory. The effect of oceanic turbulence and beam source parameters on the propagation behavior of the optical vortices carried by partially coherent LG beams was investigated in detail. Our results indicated that optical turbulence in an ocean environment produced a much stronger effect on the optical vortex than that in an atmosphere environment; the effective range of the signal OAM mode of LG beams with a smaller ratio of the mode crosstalk was limited to only several tens of meters in turbulent ocean. The existence of oceanic turbulence evidently induced OAM mode crosstalk and spiral spectrum spread. The effects of oceanic turbulence on the OAM mode detection probability increased with the increase of radial and azimuthal mode orders, oceanic turbulent equivalent temperature structure parameter, and temperature-salinity balance parameter. The spatial partial coherence of the beam source would enhance the effect of turbulent aberrations on the signal OAM mode detection probability, and fully coherent vortex beams provided better performance than partially coherent ones. Increasing wavelength of the vortex beams would help improve the performance of this quantum optical communication system. These results might be of interest for the potential application of optical vortices in practical underwater quantum optical communication among divers, submarines, and sensors in the ocean environment.

  2. Surrogacy Assessment Using Principal Stratification and a Gaussian Copula Model

    PubMed Central

    Taylor, J.M.G.; Elliott, M.R.

    2014-01-01

    In clinical trials, a surrogate outcome (S) can be measured before the outcome of interest (T) and may provide early information regarding the treatment (Z) effect on T. Many methods of surrogacy validation rely on models for the conditional distribution of T given Z and S. However, S is a post-randomization variable, and unobserved, simultaneous predictors of S and T may exist, resulting in a non-causal interpretation. Frangakis and Rubin1 developed the concept of principal surrogacy, stratifying on the joint distribution of the surrogate marker under treatment and control to assess the association between the causal effects of treatment on the marker and the causal effects of treatment on the clinical outcome. Working within the principal surrogacy framework, we address the scenario of an ordinal categorical variable as a surrogate for a censored failure time true endpoint. A Gaussian copula model is used to model the joint distribution of the potential outcomes of T, given the potential outcomes of S. Because the proposed model cannot be fully identified from the data, we use a Bayesian estimation approach with prior distributions consistent with reasonable assumptions in the surrogacy assessment setting. The method is applied to data from a colorectal cancer clinical trial, previously analyzed by Burzykowski et al..2 PMID:24947559

  3. Segmentation of textured images using a multiresolution Gaussian autoregressive model.

    PubMed

    Comer, M L; Delp, E J

    1999-01-01

    We present a new algorithm for segmentation of textured images using a multiresolution Bayesian approach. The new algorithm uses a multiresolution Gaussian autoregressive (MGAR) model for the pyramid representation of the observed image, and assumes a multiscale Markov random field model for the class label pyramid. The models used in this paper incorporate correlations between different levels of both the observed image pyramid and the class label pyramid. The criterion used for segmentation is the minimization of the expected value of the number of misclassified nodes in the multiresolution lattice. The estimate which satisfies this criterion is referred to as the "multiresolution maximization of the posterior marginals" (MMPM) estimate, and is a natural extension of the single-resolution "maximization of the posterior marginals" (MPM) estimate. Previous multiresolution segmentation techniques have been based on the maximum a posterior (MAP) estimation criterion, which has been shown to be less appropriate for segmentation than the MPM criterion. It is assumed that the number of distinct textures in the observed image is known. The parameters of the MGAR model-the means, prediction coefficients, and prediction error variances of the different textures-are unknown. A modified version of the expectation-maximization (EM) algorithm is used to estimate these parameters. The parameters of the Gibbs distribution for the label pyramid are assumed to be known. Experimental results demonstrating the performance of the algorithm are presented.

  4. Gaussian model-based partitioning using iterated local search.

    PubMed

    Brusco, Michael J; Shireman, Emilie; Steinley, Douglas; Brudvig, Susan; Cradit, J Dennis

    2017-02-01

    The emergence of Gaussian model-based partitioning as a viable alternative to K-means clustering fosters a need for discrete optimization methods that can be efficiently implemented using model-based criteria. A variety of alternative partitioning criteria have been proposed for more general data conditions that permit elliptical clusters, different spatial orientations for the clusters, and unequal cluster sizes. Unfortunately, many of these partitioning criteria are computationally demanding, which makes the multiple-restart (multistart) approach commonly used for K-means partitioning less effective as a heuristic solution strategy. As an alternative, we propose an approach based on iterated local search (ILS), which has proved effective in previous combinatorial data analysis contexts. We compared multistart, ILS and hybrid multistart-ILS procedures for minimizing a very general model-based criterion that assumes no restrictions on cluster size or within-group covariance structure. This comparison, which used 23 data sets from the classification literature, revealed that the ILS and hybrid heuristics generally provided better criterion function values than the multistart approach when all three methods were constrained to the same 10-min time limit. In many instances, these differences in criterion function values reflected profound differences in the partitions obtained.

  5. Bayesian modeling of JET Li-BES for edge electron density profiles using Gaussian processes

    NASA Astrophysics Data System (ADS)

    Kwak, Sehyun; Svensson, Jakob; Brix, Mathias; Ghim, Young-Chul; JET Contributors Collaboration

    2015-11-01

    A Bayesian model for the JET lithium beam emission spectroscopy (Li-BES) system has been developed to infer edge electron density profiles. The 26 spatial channels measure emission profiles with ~15 ms temporal resolution and ~1 cm spatial resolution. The lithium I (2p-2s) line radiation in an emission spectrum is calculated using a multi-state model, which expresses collisions between the neutral lithium beam atoms and the plasma particles as a set of differential equations. The emission spectrum is described in the model including photon and electronic noise, spectral line shapes, interference filter curves, and relative calibrations. This spectral modeling gets rid of the need of separate background measurements for calculating the intensity of the line radiation. Gaussian processes are applied to model both emission spectrum and edge electron density profile, and the electron temperature to calculate all the rate coefficients is obtained from the JET high resolution Thomson scattering (HRTS) system. The posterior distributions of the edge electron density profile are explored via the numerical technique and the Markov chain Monte Carlo (MCMC) samplings. See the Appendix of F. Romanelli et al., Proceedings of the 25th IAEA Fusion Energy Conference 2014, Saint Petersburg, Russia.

  6. Second harmonic generation of q-Gaussian laser beam in preformed collisional plasma channel with nonlinear absorption

    SciTech Connect

    Gupta, Naveen Singh, Arvinder; Singh, Navpreet

    2015-11-15

    This paper presents a scheme for second harmonic generation of an intense q-Gaussian laser beam in a preformed parabolic plasma channel, where collisional nonlinearity is operative with nonlinear absorption. Due to nonuniform irradiance of intensity along the wavefront of the laser beam, nonuniform Ohmic heating of plasma electrons takes place. Due to this nonuniform heating of plasma, the laser beam gets self-focused and produces strong density gradients in the transverse direction. The generated density gradients excite an electron plasma wave at pump frequency that interacts with the pump beam to produce its second harmonics. The formulation is based on a numerical solution of the nonlinear Schrodinger wave equation in WKB approximation followed by moment theory approach. A second order nonlinear differential equation governing the propagation dynamics of the laser beam with distance of propagation has been obtained and is solved numerically by Runge Kutta fourth order technique. The effect of nonlinear absorption on self-focusing of the laser beam and conversion efficiency of its second harmonics has been investigated.

  7. Exact analytical expansion of an off-axis Gaussian laser beam using the translation theorems for the vector spherical harmonics.

    PubMed

    Boyde, Lars; Chalut, Kevin J; Guck, Jochen

    2011-03-01

    The interaction of a Gaussian laser beam with a particle that is located off axis is a fundamental problem encountered across many scientific fields, including biological physics, chemistry, and medicine. For spherical geometries, generalized Lorenz-Mie theory affords a solution of Maxwell's equations for the scattering from such a particle. The solution can be obtained by expanding the laser fields in terms of vector spherical harmonics (VSHs). However, the computation of the VSH expansion coefficients for off-axis beams has proven challenging. In the present study, we provide a very viable, theoretical framework to efficiently compute the sought-after expansion coefficients with high numerical accuracy. We use the existing theory for the expansion of an on-axis laser beam and employ Cruzan's translation theorems [Q. Appl. Math.20, 33 (1962)] for the VSHs to obtain a description for more general off-axis beams. The expansion coefficients for the off-axis laser beam are presented in an analytical form in terms of an infinite series over the underlying translation coefficients. A direct comparison of the electromagnetic fields of such a beam expansion with the original laser fields and with results obtained using numerical quadratures shows excellent agreement (relative errors are on the order of ≲10(-3). In practice, the analytical approach presented in this study has numerous applications, reaching from multiparticle scattering problems in atmospheric physics and climatology to optical trapping, sorting, and sizing techniques.

  8. Gaussian model of explosive percolation in three and higher dimensions

    NASA Astrophysics Data System (ADS)

    Schrenk, K. J.; Araújo, N. A. M.; Herrmann, H. J.

    2011-10-01

    The Gaussian model of discontinuous percolation, recently introduced by Araújo and Herrmann [Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.105.035701 105, 035701 (2010)], is numerically investigated in three dimensions, disclosing a discontinuous transition. For the simple cubic lattice, in the thermodynamic limit we report a finite jump of the order parameter J=0.415±0.005. The largest cluster at the threshold is compact, but its external perimeter is fractal with fractal dimension dA=2.5±0.2. The study is extended to hypercubic lattices up to six dimensions and to the mean-field limit (infinite dimension). We find that, in all considered dimensions, the percolation transition is discontinuous. The value of the jump in the order parameter, the maximum of the second moment, and the percolation threshold are analyzed, revealing interesting features of the transition and corroborating its discontinuous nature in all considered dimensions. We also show that the fractal dimension of the external perimeter, for any dimension, is consistent with the one from bridge percolation and establish a lower bound for the percolation threshold of discontinuous models with a finite number of clusters at the threshold.

  9. Gaussian Process Model for Collision Dynamics of Complex Molecules.

    PubMed

    Cui, Jie; Krems, Roman V

    2015-08-14

    We show that a Gaussian process model can be combined with a small number (of order 100) of scattering calculations to provide a multidimensional dependence of scattering observables on the experimentally controllable parameters (such as the collision energy or temperature) as well as the potential energy surface (PES) parameters. For the case of Ar-C_{6}H_{6} collisions, we show that 200 classical trajectory calculations are sufficient to provide a ten-dimensional hypersurface, giving the dependence of the collision lifetimes on the collision energy, internal temperature, and eight PES parameters. This can be used for solving the inverse scattering problem, for the efficient calculation of thermally averaged observables, for reducing the error of the molecular dynamics calculations by averaging over the PES variations, and for the analysis of the sensitivity of the observables to individual parameters determining the PES. Trained by a combination of classical and quantum calculations, the model provides an accurate description of the quantum scattering cross sections, even near scattering resonances.

  10. Genetic-based EM algorithm for learning Gaussian mixture models.

    PubMed

    Pernkopf, Franz; Bouchaffra, Djamel

    2005-08-01

    We propose a genetic-based expectation-maximization (GA-EM) algorithm for learning Gaussian mixture models from multivariate data. This algorithm is capable of selecting the number of components of the model using the minimum description length (MDL) criterion. Our approach benefits from the properties of Genetic algorithms (GA) and the EM algorithm by combination of both into a single procedure. The population-based stochastic search of the GA explores the search space more thoroughly than the EM method. Therefore, our algorithm enables escaping from local optimal solutions since the algorithm becomes less sensitive to its initialization. The GA-EM algorithm is elitist which maintains the monotonic convergence property of the EM algorithm. The experiments on simulated and real data show that the GA-EM outperforms the EM method since: 1) We have obtained a better MDL score while using exactly the same termination condition for both algorithms. 2) Our approach identifies the number of components which were used to generate the underlying data more often than the EM algorithm.

  11. Implementation of a double Gaussian source model for the BEAMnrc Monte Carlo code and its influence on small fields dose distributions.

    PubMed

    Doerner, Edgardo; Caprile, Paola

    2016-09-01

    The shape of the radiation source of a linac has a direct impact on the delivered dose distributions, especially in the case of small radiation fields. Traditionally, a single Gaussian source model is used to describe the electron beam hitting the target, although different studies have shown that the shape of the electron source can be better described by a mixed distribution consisting of two Gaussian components. Therefore, this study presents the implementation of a double Gaussian source model into the BEAMnrc Monte Carlo code. The impact of the double Gaussian source model for a 6 MV beam is assessed through the comparison of different dosimetric parameters calculated using a single Gaussian source, previously commissioned, the new double Gaussian source model and measurements, performed with a diode detector in a water phantom. It was found that the new source can be easily implemented into the BEAMnrc code and that it improves the agreement between measurements and simulations for small radiation fields. The impact of the change in source shape becomes less important as the field size increases and for increasing distance of the collimators to the source, as expected. In particular, for radiation fields delivered using stereotactic collimators located at a distance of 59 cm from the source, it was found that the effect of the double Gaussian source on the calculated dose distributions is negligible, even for radiation fields smaller than 5 mm in diameter. Accurate determination of the shape of the radiation source allows us to improve the Monte Carlo modeling of the linac, especially for treatment modalities such as IMRT, were the radiation beams used could be very narrow, becoming more sensitive to the shape of the source. PACS number(s): 87.53.Bn, 87.55.K, 87.56.B-, 87.56.jf.

  12. Trapping of a micro-bubble by non-paraxial Gaussian beam: computation using the FDTD method.

    PubMed

    Sung, Seung-Yong; Lee, Yong-Gu

    2008-03-03

    Optical forces on a micro-bubble were computed using the Finite Difference Time Domain method. Non-paraxial Gaussian beam equation was used to represent the incident laser with high numerical aperture, common in optical tweezers. The electromagnetic field distribution around a micro-bubble was computed using FDTD method and the electromagnetic stress tensor on the surface of a micro-bubble was used to compute the optical forces. By the analysis of the computational results, interesting relations between the radius of the circular trapping ring and the corresponding stability of the trap were found.

  13. Orientation Dependence of Linewidth Variation in sub-50-nm Gaussian e-beam Lithography and its Correction

    SciTech Connect

    Lu,M.; Tennant, D.; Jacobsen, C.

    2006-01-01

    The width of tilted line patterns, such as are needed when drawing circular structures, is found to vary with the oblique angle when it falls into the sub-50-nm scale in Gaussian e-beam lithography. The authors analysis shows that this orientation dependence of linewidth variation originates from the nonuniformity of discrete primitive filling in Cartesian coordinates. Two correction schemes based on pattern segmentation are proposed. Test exposures of high resolution zone plate patterns show that both two schemes work well; a double-insert scheme is superior in terms of dose distribution uniformity.

  14. Applications of the Complex Huygens Principle and Gaussian Pulsed-beam Wavelet Representations in Acoustics and Electromagnetics

    DTIC Science & Technology

    2015-06-22

    the complex Huygens principle and Gaussian pulsed-beam wavelet representations in acoustics and electromagnetics N/A FA9550-12-1-0122 N/A N/A N/A N/A...concept of electromagnetic inertia which I had defined in 2011, and which posed some conceptual problems since it implied that electromagnetic energy...energy. I further defined a complex radiation impedance density analogous to the impedance Z=R+iX of an RLC circuit. I hope to use this analogy to

  15. A correction factor for ablation algorithms assuming deviations of Lambert-Beer's law with a Gaussian-profile beam

    NASA Astrophysics Data System (ADS)

    Rodríguez-Marín, Francisco; Anera, Rosario G.; Alarcón, Aixa; Hita, E.; Jiménez, J. R.

    2012-04-01

    In this work, we propose an adjustment factor to be considered in ablation algorithms used in refractive surgery. This adjustment factor takes into account potential deviations of Lambert-Beer's law and the characteristics of a Gaussian-profile beam. To check whether the adjustment factor deduced is significant for visual function, we applied it to the paraxial Munnerlyn formula and found that it significantly influences the post-surgical corneal radius and p-factor. The use of the adjustment factor can help reduce the discrepancies in corneal shape between the real data and corneal shape expected when applying laser ablation algorithms.

  16. Reflection of a TE-polarised Gaussian beam from a layered structure under conditions of resonance excitation of waveguide modes

    SciTech Connect

    Sokolov, V I; Marusin, N V; Molchanova, S I; Savelyev, A G; Khaydukov, E V; Panchenko, V Ya

    2014-11-30

    The problem of reflection of a TE-polarised Gaussian light beam from a layered structure under conditions of resonance excitation of waveguide modes using a total internal reflection prism is considered. Using the spectral approach we have derived the analytic expressions for the mode propagation lengths, widths and depths of m-lines (sharp and narrow dips in the angular dependence of the specular reflection coefficient), depending on the structure parameters. It is shown that in the case of weak coupling, when the propagation lengths l{sub m} of the waveguide modes are mainly determined by the extinction coefficient in the film, the depth of m-lines grows with the mode number m. In the case of strong coupling, when l{sub m} is determined mainly by the radiation of modes into the prism, the depth of m-lines decreases with increasing m. The change in the TE-polarised Gaussian beam shape after its reflection from the layered structure is studied, which is determined by the energy transfer from the incident beam into waveguide modes that propagate along the structure by the distance l{sub m}, are radiated in the direction of specular reflection and interfere with a part of the beam reflected from the working face of the prism. It is shown that this interference can lead to the field intensity oscillations near m-lines. The analysis of different methods for determining the parameters of thin-film structures is presented, including the measurement of mode angles θ{sub m} and the reflected beam shape. The methods are based on simultaneous excitation of a few waveguide modes in the film with a strongly focused monochromatic Gaussian beam, the waist width of which is much smaller than the propagation length of the modes. As an example of using these methods, the refractive index and the thickness of silicon monoxide film on silica substrate at the wavelength 633 nm are determined. (fibre and integrated-optical structures)

  17. Fundamentals of negative refractive index optical trapping: forces and radiation pressures exerted by focused Gaussian beams using the generalized Lorenz-Mie theory.

    PubMed

    Ambrosio, Leonardo A; Hernández-Figueroa, Hugo E

    2010-11-04

    Based on the generalized Lorenz-Mie theory (GLMT), this paper reveals, for the first time in the literature, the principal characteristics of the optical forces and radiation pressure cross-sections exerted on homogeneous, linear, isotropic and spherical hypothetical negative refractive index (NRI) particles under the influence of focused Gaussian beams in the Mie regime. Starting with ray optics considerations, the analysis is then extended through calculating the Mie coefficients and the beam-shape coefficients for incident focused Gaussian beams. Results reveal new and interesting trapping properties which are not observed for commonly positive refractive index particles and, in this way, new potential applications in biomedical optics can be devised.

  18. A Gaussian model for movement detection during sleep.

    PubMed

    Adami, Adriana M; Adami, André G; Hayes, Tamara L; Pavel, Misha; Beattie, Zachary T

    2012-01-01

    Quality of sleep is an important attribute of an individual's health state and its assessment is therefore a useful diagnostic feature. Changes in the patterns of mobility in bed during sleep can be a disease marker or can reflect various abnormal physiological and neurological conditions. This paper describes a method for detection of movement in bed that is evaluated on data collected from patients admitted for regular polysomnography. The system is based on load cells installed at the supports of a bed. Since the load cell signal varies the most during movement, the approach uses a weighted combination of the short-term mean-square differences of each load cell signal to capture the variations in the signal caused by movement. We use a single univariate Gaussian model to represent each class: movement versus non-movement. We assess the performance of the method against manual annotation performed by a sleep clinic technician from seventeen patients. The proposed detection method achieved an overall sensitivity of 97.9% and specificity of 98.7%.

  19. Storytelling Voice Conversion: Evaluation Experiment Using Gaussian Mixture Models

    NASA Astrophysics Data System (ADS)

    Přibil, Jiří; Přibilová, Anna; Ďuračková, Daniela

    2015-07-01

    In the development of the voice conversion and personification of the text-to-speech (TTS) systems, it is very necessary to have feedback information about the users' opinion on the resulting synthetic speech quality. Therefore, the main aim of the experiments described in this paper was to find out whether the classifier based on Gaussian mixture models (GMM) could be applied for evaluation of different storytelling voices created by transformation of the sentences generated by the Czech and Slovak TTS system. We suppose that it is possible to combine this GMM-based statistical evaluation with the classical one in the form of listening tests or it can replace them. The results obtained in this way were in good correlation with the results of the conventional listening test, so they confirm practical usability of the developed GMM classifier. With the help of the performed analysis, the optimal setting of the initial parameters and the structure of the input feature set for recognition of the storytelling voices was finally determined.

  20. Gaussian noise and the two-network frustrated Kuramoto model

    NASA Astrophysics Data System (ADS)

    Holder, Andrew B.; Zuparic, Mathew L.; Kalloniatis, Alexander C.

    2017-02-01

    We examine analytically and numerically a variant of the stochastic Kuramoto model for phase oscillators coupled on a general network. Two populations of phased oscillators are considered, labelled 'Blue' and 'Red', each with their respective networks, internal and external couplings, natural frequencies, and frustration parameters in the dynamical interactions of the phases. We disentangle the different ways that additive Gaussian noise may influence the dynamics by applying it separately on zero modes or normal modes corresponding to a Laplacian decomposition for the sub-graphs for Blue and Red. Under the linearisation ansatz that the oscillators of each respective network remain relatively phase-synchronised centroids or clusters, we are able to obtain simple closed-form expressions using the Fokker-Planck approach for the dynamics of the average angle of the two centroids. In some cases, this leads to subtle effects of metastability that we may analytically describe using the theory of ratchet potentials. These considerations are extended to a regime where one of the populations has fragmented in two. The analytic expressions we derive largely predict the dynamics of the non-linear system seen in numerical simulation. In particular, we find that noise acting on a more tightly coupled population allows for improved synchronisation of the other population where deterministically it is fragmented.

  1. Gaussian beam reflection and refraction by a spherical or parabolic surface: comparison of vectorial-law calculation with lens approximation.

    PubMed

    Tkaczyk, Eric R; Mauring, Koit; Tkaczyk, Alan H

    2012-10-01

    A ray-tracing approach is used to demonstrate efficient application of the vectorial laws of reflection and refraction to computational optics problems. Both the full width at half-maximum (fwhm) and offset of Gaussian beams resulting from off-center reflection and refraction are calculated for spherical and paraboloidal surfaces of revolution. It is found that the magnification and displacement depend nonlinearly on the miscentering. For these geometries, the limits of accuracy of the lens approximation are examined quantitatively. In contrast to the ray-tracing solution, this paraxial approximation would predict a magnification of a beam's fwhm that is independent of miscentering, and an offset linearly proportional to the miscentering. The focusing property of paraboloidal surfaces of revolution is also derived in setting up the calculation.

  2. Self-Focusing of Quadruple Gaussian Laser Beam in an Inhomogenous Magnetized Plasma with Ponderomotive Non-Linearity: Effect of Linear Absorption

    NASA Astrophysics Data System (ADS)

    Aggarwal, Munish; Vij, Shivani; Kant, Niti

    2015-11-01

    The propagation of quadruple Gaussian laser beam in a plasma characterized by axial inhomogeneity and nonlinearity due to ponderomotive force in the paraxial ray approximation is investigated. An appropriate expression for the nonlinear dielectric constant has been developed in the presence of external magnetic field, with linear absorption and due to saturation effects for arbitrary large intensity. The effects of different types of plasma axial inhomogeneities on self-focusing of laser beam have been studied with the typical laser and plasma parameters. Self-focusing of quadruple Gaussian laser beam in the presence of externally applied magnetic field and saturating parameter is found significantly improved in the case of extraordinary mode. Our results reveal that initially converging beam shows oscillatory convergence whereas initially diverging beam shows oscillatory divergence. The beam is more focussed at lower intensity in both cases viz. extraordinary and ordinary mode.

  3. Non-Gaussian PDF Modeling of Turbulent Boundary Layer Fluctuating Pressure Excitation

    NASA Technical Reports Server (NTRS)

    Steinwolf, Alexander; Rizzi, Stephen A.

    2003-01-01

    The purpose of the study is to investigate properties of the probability density function (PDF) of turbulent boundary layer fluctuating pressures measured on the exterior of a supersonic transport aircraft. It is shown that fluctuating pressure PDFs differ from the Gaussian distribution even for surface conditions having no significant discontinuities. The PDF tails are wider and longer than those of the Gaussian model. For pressure fluctuations upstream of forward-facing step discontinuities and downstream of aft-facing step discontinuities, deviations from the Gaussian model are more significant and the PDFs become asymmetrical. Various analytical PDF distributions are used and further developed to model this behavior.

  4. Acoustic scattering of a cylindrical quasi-Gaussian beam with arbitrary incidence focused on a rigid elliptical cylinder

    SciTech Connect

    Mitri, F. G.

    2015-11-14

    Using the partial-wave series expansion method in cylindrical coordinates, a formal analytical solution for the acoustical scattering of a 2D cylindrical quasi-Gaussian beam with an arbitrary angle of incidence θ{sub i}, focused on a rigid elliptical cylinder in a non-viscous fluid, is developed. The cylindrical focused beam expression is an exact solution of the Helmholtz equation. The scattering coefficients for the elliptical cylinder are determined by forcing the expression of the total (incident + scattered) field to satisfy the Neumann boundary condition for a rigid immovable surface, and performing the product of matrices involving an inversion procedure. Computations for the matrices elements require a single numerical integration procedure for each partial-wave mode. Numerical results are performed with particular emphasis on the focusing properties of the incident beam and its angle of incidence with respect to the major axis a of the ellipse as well as the aspect ratio a/b where b is the minor axis (assuming a > b). The method is validated and verified against previous results obtained via the T-matrix for plane waves. The present analysis is the first to consider an acoustical beam on an elliptic cylinder of variable cross-section as opposed to plane waves of infinite extent. Other 2D non-spherical and Chebyshev surfaces are mentioned that may be examined throughout this analytical formalism assuming a small deformation parameter ε.

  5. Application of Gaussian Process Modeling to Analysis of Functional Unreliability

    SciTech Connect

    R. Youngblood

    2014-06-01

    This paper applies Gaussian Process (GP) modeling to analysis of the functional unreliability of a “passive system.” GPs have been used widely in many ways [1]. The present application uses a GP for emulation of a system simulation code. Such an emulator can be applied in several distinct ways, discussed below. All applications illustrated in this paper have precedents in the literature; the present paper is an application of GP technology to a problem that was originally analyzed [2] using neural networks (NN), and later [3, 4] by a method called “Alternating Conditional Expectations” (ACE). This exercise enables a multifaceted comparison of both the processes and the results. Given knowledge of the range of possible values of key system variables, one could, in principle, quantify functional unreliability by sampling from their joint probability distribution, and performing a system simulation for each sample to determine whether the function succeeded for that particular setting of the variables. Using previously available system simulation codes, such an approach is generally impractical for a plant-scale problem. It has long been recognized, however, that a well-trained code emulator or surrogate could be used in a sampling process to quantify certain performance metrics, even for plant-scale problems. “Response surfaces” were used for this many years ago. But response surfaces are at their best for smoothly varying functions; in regions of parameter space where key system performance metrics may behave in complex ways, or even exhibit discontinuities, response surfaces are not the best available tool. This consideration was one of several that drove the work in [2]. In the present paper, (1) the original quantification of functional unreliability using NN [2], and later ACE [3], is reprised using GP; (2) additional information provided by the GP about uncertainty in the limit surface, generally unavailable in other representations, is discussed

  6. Optimisation of dispersion parameters of Gaussian plume model for CO₂ dispersion.

    PubMed

    Liu, Xiong; Godbole, Ajit; Lu, Cheng; Michal, Guillaume; Venton, Philip

    2015-11-01

    The carbon capture and storage (CCS) and enhanced oil recovery (EOR) projects entail the possibility of accidental release of carbon dioxide (CO2) into the atmosphere. To quantify the spread of CO2 following such release, the 'Gaussian' dispersion model is often used to estimate the resulting CO2 concentration levels in the surroundings. The Gaussian model enables quick estimates of the concentration levels. However, the traditionally recommended values of the 'dispersion parameters' in the Gaussian model may not be directly applicable to CO2 dispersion. This paper presents an optimisation technique to obtain the dispersion parameters in order to achieve a quick estimation of CO2 concentration levels in the atmosphere following CO2 blowouts. The optimised dispersion parameters enable the Gaussian model to produce quick estimates of CO2 concentration levels, precluding the necessity to set up and run much more complicated models. Computational fluid dynamics (CFD) models were employed to produce reference CO2 dispersion profiles in various atmospheric stability classes (ASC), different 'source strengths' and degrees of ground roughness. The performance of the CFD models was validated against the 'Kit Fox' field measurements, involving dispersion over a flat horizontal terrain, both with low and high roughness regions. An optimisation model employing a genetic algorithm (GA) to determine the best dispersion parameters in the Gaussian plume model was set up. Optimum values of the dispersion parameters for different ASCs that can be used in the Gaussian plume model for predicting CO2 dispersion were obtained.

  7. Cross Focusing of two Coaxial Gaussian Beams with Relativistic and Ponderomotive Nonlinearity

    NASA Astrophysics Data System (ADS)

    Sharma, Prerana

    2012-02-01

    This paper presents the cross focusing of two high power lasers by taking off-axial contributions of the laser beams in a collisionless plasma. Due to relativistic and ponderomotive nonlinearities the two laser beams affect the dynamics of each other and cross focusing takes place. The expressions for the laser beam intensities by using the eikonal method are derived. The contributions of the r2 and r4 terms are incorporated. By expanding the eikonal and the other relevant quantities up to the fourth power of r, the solution of the pump laser beam is obtained within the extended paraxial ray approximation. Filamentary structures of the laser beams are observed due to the relativistic and the ponderomotive nonlinearity. The focusing of the laser beams is shown to become fast in the extended paraxial region. Using the laser beam and the plasma parameters, appropriate for beat wave processes, the filaments of the laser beams are studied and the relevance of these results to beat wave processes is pointed out.

  8. A non-gaussian model of continuous atmospheric turbulence for use in aircraft design

    NASA Technical Reports Server (NTRS)

    Reeves, P. M.; Joppa, R. G.; Ganzer, V. M.

    1976-01-01

    A non-Gaussian model of atmospheric turbulence is presented and analyzed. The model is restricted to the regions of the atmosphere where the turbulence is steady or continuous, and the assumptions of homogeneity and stationarity are justified. Also spatial distribution of turbulence is neglected, so the model consists of three independent, stationary stochastic processes which represent the vertical, lateral, and longitudinal gust components. The non-Gaussian and Gaussian models are compared with experimental data, and it is shown that the Gaussian model underestimates the number of high velocity gusts which occur in the atmosphere, while the non-Gaussian model can be adjusted to match the observed high velocity gusts more satisfactorily. Application of the proposed model to aircraft response is investigated, with particular attention to the response power spectral density, the probability distribution, and the level crossing frequency. A numerical example is presented which illustrates the application of the non-Gaussian model to the study of an aircraft autopilot system. Listings and sample results of a number of computer programs used in working with the model are included.

  9. Diffractive efficiency improvement of diffractive cylinder lenses by Gaussian-beam illumination.

    PubMed

    Fuerer, F; Schmidt, M; Bryngdahl, O

    1997-10-13

    To maximize the diffraction efficiency of cylinder lenses with high numerical apertures (such as F/0.5 lenses) we use an iterative algorithm to determine the optimum field distribution in the lens plane. The algorithm simulates the free-space propagation between the lens and the focal plane applying the angular spectrum of plane waves. We show that the optimum field distribution in the lens plane is the phase distribution of a converging cylindrical wave-front and an amplitude distribution with Gaussian-profile. The computed results are verified by rigorous calculations, simulating a F/0.5 lens with subwavelength structures.

  10. A comparison of far-field properties of radial noncanonical vortex airy beam arrays and radial noncanonical vortex Gaussian beam arrays

    NASA Astrophysics Data System (ADS)

    Cheng, Ke; Jiao, Liyang; Zhong, Xianqiong

    2016-05-01

    Based on the vector angular spectrum representation and stationary phase method, the analytical far-field vectorial expressions of radial noncanonical vortex Airy beam arrays (NVAiBAs) and radial noncanonical vortex Gaussian beam arrays (NVGBAs) are derived, and used to investigate their far-field vectorial properties, e.g. center optical vortices and energy fluxes of these corresponding beams, where the effect of noncanonical strength, topological charge, initial phase index and the number of beamlet on far-field vectorial properties of these corresponding beams is emphasized, respectively. The results show that the topological charge of center optical vortices in the far field is equal to initial phase index for the case of the radial NVAiBAs, whereas for radial NVGBAs the topological charge not only lies on initial phase index, but also is closely related to the odevity and sign of optical vortices embedded in beamlet, where mathematical analysis is made to explain the topological charge of center optical vortices, and the limitation of the number of beamlet to the topological charge of center optical vortices is also discussed. In addition, energy fluxes of radial NVAiBAs and NVGBAs exhibit different space orientations by controlling noncancial strength and present larger dark zones by increasing topological charge of beamlet, respectively. Finally, the relationship between the center optical vortices and energy fluxes of radial NVAiBAs and NVGBAs in even or odd N beamlets is also revealed, respectively.

  11. Gaussian Cubes: Real-Time Modeling for Visual Exploration of Large Multidimensional Datasets.

    PubMed

    Wang, Zhe; Ferreira, Nivan; Wei, Youhao; Bhaskar, Aarthy Sankari; Scheidegger, Carlos

    2017-01-01

    Recently proposed techniques have finally made it possible for analysts to interactively explore very large datasets in real time. However powerful, the class of analyses these systems enable is somewhat limited: specifically, one can only quickly obtain plots such as histograms and heatmaps. In this paper, we contribute Gaussian Cubes, which significantly improves on state-of-the-art systems by providing interactive modeling capabilities, which include but are not limited to linear least squares and principal components analysis (PCA). The fundamental insight in Gaussian Cubes is that instead of precomputing counts of many data subsets (as state-of-the-art systems do), Gaussian Cubes precomputes the best multivariate Gaussian for the respective data subsets. As an example, Gaussian Cubes can fit hundreds of models over millions of data points in well under a second, enabling novel types of visual exploration of such large datasets. We present three case studies that highlight the visualization and analysis capabilities in Gaussian Cubes, using earthquake safety simulations, astronomical catalogs, and transportation statistics. The dataset sizes range around one hundred million elements and 5 to 10 dimensions. We present extensive performance results, a discussion of the limitations in Gaussian Cubes, and future research directions.

  12. Critical and crossover behavior in the double-Gaussian model on a lattice

    NASA Astrophysics Data System (ADS)

    Baker, George A., Jr.; Bishop, A. R.; Fesser, K.; Beale, Paul D.; Krumhansl, J. A.

    1982-09-01

    The double-Gaussian model, as recently introduced by Baker and Bishop, is studied in the context of a lattice-dynamics Hamiltonian belonging to the familiar φ4 class. Advantage is taken of the partition-function factorability (into Ising and Gaussian components) to place bounds on the Ising-class critical temperature for various lattice dimensions and all degrees of displaciveness in the bare Hamiltonian. Further, a simple criterion for a noncritical and nonuniversal crossover from order-disorder to Gaussian behavior is evaluated in numerical detail. In one and two dimensions these critical and crossover properties are compared with predictions based on real-space decimation renormalization-group flows, as previously exploited in the φ4 model by Beale et al. The double-Gaussian model again introduces some unique analytical advantages.

  13. Critical and crossover behavior in the double Gaussian model on a lattice

    SciTech Connect

    Baker, G.A. Jr.; Bishop, A.R.; Fesser, K.; Beale, P.D.; Krumhansl, J.A.

    1982-09-01

    The-double-Gaussian model, as recently introduced by Baker and Bishop, is studied in the context of a lattice-dynamics Hamiltonian belonging to the familiar phi/sup 4/ class. Advantage is taken of the partition-function factorability (into Ising and Gaussian components) to place bounds on the Ising-class critical temperature for various lattice dimensions and all degrees of displaciveness in the bare Hamiltonian. Further, a simple criterion for a noncritical and nonuniversal crossover from order-disorder to Gaussian behavior is evaluated in numerical detail. In one and two dimensions these critical and crossover properties are compared with predictions based on real-space decimation renormalization-group flows, as previously exploited in the phi/sup 4/ model by Beale et al. The double-Gaussian model again introduces some unique analytical advantages.

  14. Terahertz generation by relativistic ponderomotive focusing of two co-axial Gaussian laser beams propagating in ripple density plasma

    SciTech Connect

    Kumar, Subodh; Singh, Ram Kishor Sharma, R. P.

    2015-10-15

    Terahertz (THz) generation by beating of two co-axial Gaussian laser beams, propagating in ripple density plasma, has been studied when both ponderomotive and relativistic nonlinearities are operative. When the two lasers co-propagate in rippled density plasma, electrons acquire a nonlinear velocity at beat frequency in the direction transverse to the direction of propagation. This nonlinear oscillatory velocity couples with the density ripple to generate a nonlinear current, which in turn generates THz radiation at the difference frequency. The necessary phase matching condition is provided by the density ripple. Relativistic ponderomotive focusing of the two lasers and its effects on yield of the generated THz amplitude have been discussed. Numerical results show that conversion efficiency of the order of 10{sup −3} can be achieved in the terahertz radiation generation with relativistic ponderomotive focusing.

  15. Terahertz generation by relativistic ponderomotive focusing of two co-axial Gaussian laser beams propagating in ripple density plasma

    NASA Astrophysics Data System (ADS)

    Kumar, Subodh; Singh, Ram Kishor; Sharma, R. P.

    2015-10-01

    Terahertz (THz) generation by beating of two co-axial Gaussian laser beams, propagating in ripple density plasma, has been studied when both ponderomotive and relativistic nonlinearities are operative. When the two lasers co-propagate in rippled density plasma, electrons acquire a nonlinear velocity at beat frequency in the direction transverse to the direction of propagation. This nonlinear oscillatory velocity couples with the density ripple to generate a nonlinear current, which in turn generates THz radiation at the difference frequency. The necessary phase matching condition is provided by the density ripple. Relativistic ponderomotive focusing of the two lasers and its effects on yield of the generated THz amplitude have been discussed. Numerical results show that conversion efficiency of the order of 10-3 can be achieved in the terahertz radiation generation with relativistic ponderomotive focusing.

  16. Simulation and analysis of grinding wheel based on Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Chi, Yulun; Li, Haolin

    2012-12-01

    This article presents an application of numerical simulation technique for the generation and analysis of the grinding wheel surface topographies. The ZETA 20 imaging and metrology microscope is employed to measure the surface topographies. The Gaussian mixture model (GMM) is used to transform the measured non-Gaussian field to Gaussian fields, and the simulated topographies are generated. Some numerical examples are used to illustrate the viability of the method. It shows that the simulated grinding wheel topographies are similar with the measured and can be effective used to study the abrasive grains and grinding mechanism.

  17. Analytic model of the effect of poly-Gaussian roughness on rarefied gas flow near the surface

    NASA Astrophysics Data System (ADS)

    Aksenova, Olga A.; Khalidov, Iskander A.

    2016-11-01

    The dependence of the macro-parameters of the flow on surface roughness of the walls and on geometrical shape of the surface is investigated asymptotically and numerically in a rarefied gas molecular flow at high Knudsen numbers. Surface roughness is approximated in statistical simulation by the model of poly-Gaussian (with probability density as the mixture of Gaussian densities [1]) random process. Substantial difference is detected for considered models of the roughness (Gaussian, poly-Gaussian and simple models applied by other researchers), as well in asymptotical expressions [3], as in numerical results. For instance, the influence of surface roughness on momentum and energy exchange coefficients increases noticeably for poly-Gaussian model compared to Gaussian one (although the main properties of poly-Gaussian random processes and fields are similar to corresponding properties of Gaussian processes and fields). Main advantage of the model is based on relative simple relations between the parameters of the model and the basic statistical characteristics of random field. Considered statistical approach permits to apply not only diffuse-specular model of the local scattering function V0 of reflected gas atoms, but also Cercignani-Lampis scattering kernel or phenomenological models of scattering function. Thus, the comparison between poly-Gaussian and Gaussian models shows more significant effect of roughness in aerodynamic values for poly-Gaussian model.

  18. Quasi-optical Gaussian beam tracing to evaluate Doppler backscattering conditions

    NASA Astrophysics Data System (ADS)

    Honoré, C.; Hennequin, P.; Truc, A.; Quéméneur, A.

    2006-09-01

    Microwave beam backscattering near the cut-off layer appears to be the most interesting diagnostic to observe density fluctuation time evolution for a given localization in the plasma and at a defined wave vector. It also provides perpendicular plasma velocity. Scattering only occurs when the Bragg selection rule is fulfilled, i.e. when the scattering wave vector is almost perpendicular to the magnetic field. In order to evaluate these scattering conditions, ray tracing is required. 3D geometry is necessary to evaluate the angle between the magnetic field and the wave vector at the reflection. The ripple effect on the iso-index layer curve cannot be neglected. Scattering localization and wave vector resolution can be approached if single ray tracing is replaced with quasi-optical beam tracing. Optical propagation is still considered in the WKB approximation but the beam is described as multiple connected rays. The beam radial expansion due to diffraction is well described. This approach allows one to compute beam parameters for all data acquisitions (50 triggers per shot) and all shots (40 shots per day) during the following night on a recent personal computer with MatLab©.

  19. A note on population analysis of dissolution-absorption models using the inverse Gaussian function.

    PubMed

    Wang, Jian; Weiss, Michael; D'Argenio, David Z

    2008-06-01

    Because conventional absorption models often fail to describe plasma concentration-time profiles following oral administration, empirical input functions such as the inverse Gaussian function have been successfully used. The purpose of this note is to extend this model by adding a first-order absorption process and to demonstrate the application of population analysis using maximum likelihood estimation via the EM algorithm (implemented in ADAPT 5). In one example, the analysis of bioavailability data of an extended-release formulation, as well as the mean dissolution times estimated in vivo and in vitro with the use of the inverse Gaussian function, is well in accordance, suggesting that the inverse Gaussian function indeed accounts for the in vivo dissolution process. In the other example, the kinetics of trapidil in patients with liver disease, the absorption/dissolution parameters are characterized by a high interindividual variability. Adding a first-order absorption process to the inverse Gaussian function improved the fit in both cases.

  20. Non-Gaussianity and large-scale structure in a two-field inflationary model

    SciTech Connect

    Tseliakhovich, Dmitriy; Hirata, Christopher

    2010-08-15

    Single-field inflationary models predict nearly Gaussian initial conditions, and hence a detection of non-Gaussianity would be a signature of the more complex inflationary scenarios. In this paper we study the effect on the cosmic microwave background and on large-scale structure from primordial non-Gaussianity in a two-field inflationary model in which both the inflaton and curvaton contribute to the density perturbations. We show that in addition to the previously described enhancement of the galaxy bias on large scales, this setup results in large-scale stochasticity. We provide joint constraints on the local non-Gaussianity parameter f-tilde{sub NL} and the ratio {xi} of the amplitude of primordial perturbations due to the inflaton and curvaton using WMAP and Sloan Digital Sky Survey data.

  1. Non-Gaussianity and Large Scale Structure in a two-field Inflationary model

    SciTech Connect

    Tseliakhovich, D.; Slosar, A.; Hirata, C.

    2010-08-30

    Single-field inflationary models predict nearly Gaussian initial conditions, and hence a detection of non-Gaussianity would be a signature of the more complex inflationary scenarios. In this paper we study the effect on the cosmic microwave background and on large-scale structure from primordial non-Gaussianity in a two-field inflationary model in which both the inflaton and curvaton contribute to the density perturbations. We show that in addition to the previously described enhancement of the galaxy bias on large scales, this setup results in large-scale stochasticity. We provide joint constraints on the local non-Gaussianity parameter f*{sub NL} and the ratio {zeta} of the amplitude of primordial perturbations due to the inflaton and curvaton using WMAP and Sloan Digital Sky Survey data.

  2. Comparison of non-Gaussian and Gaussian diffusion models of diffusion weighted imaging of rectal cancer at 3.0 T MRI

    PubMed Central

    Zhang, Guangwen; Wang, Shuangshuang; Wen, Didi; Zhang, Jing; Wei, Xiaocheng; Ma, Wanling; Zhao, Weiwei; Wang, Mian; Wu, Guosheng; Zhang, Jinsong

    2016-01-01

    Water molecular diffusion in vivo tissue is much more complicated. We aimed to compare non-Gaussian diffusion models of diffusion-weighted imaging (DWI) including intra-voxel incoherent motion (IVIM), stretched-exponential model (SEM) and Gaussian diffusion model at 3.0 T MRI in patients with rectal cancer, and to determine the optimal model for investigating the water diffusion properties and characterization of rectal carcinoma. Fifty-nine consecutive patients with pathologically confirmed rectal adenocarcinoma underwent DWI with 16 b-values at a 3.0 T MRI system. DWI signals were fitted to the mono-exponential and non-Gaussian diffusion models (IVIM-mono, IVIM-bi and SEM) on primary tumor and adjacent normal rectal tissue. Parameters of standard apparent diffusion coefficient (ADC), slow- and fast-ADC, fraction of fast ADC (f), α value and distributed diffusion coefficient (DDC) were generated and compared between the tumor and normal tissues. The SEM exhibited the best fitting results of actual DWI signal in rectal cancer and the normal rectal wall (R2 = 0.998, 0.999 respectively). The DDC achieved relatively high area under the curve (AUC = 0.980) in differentiating tumor from normal rectal wall. Non-Gaussian diffusion models could assess tissue properties more accurately than the ADC derived Gaussian diffusion model. SEM may be used as a potential optimal model for characterization of rectal cancer. PMID:27934928

  3. Receiver design for SPAD-based VLC systems under Poisson-Gaussian mixed noise model.

    PubMed

    Mao, Tianqi; Wang, Zhaocheng; Wang, Qi

    2017-01-23

    Single-photon avalanche diode (SPAD) is a promising photosensor because of its high sensitivity to optical signals in weak illuminance environment. Recently, it has drawn much attention from researchers in visible light communications (VLC). However, existing literature only deals with the simplified channel model, which only considers the effects of Poisson noise introduced by SPAD, but neglects other noise sources. Specifically, when an analog SPAD detector is applied, there exists Gaussian thermal noise generated by the transimpedance amplifier (TIA) and the digital-to-analog converter (D/A). Therefore, in this paper, we propose an SPAD-based VLC system with pulse-amplitude-modulation (PAM) under Poisson-Gaussian mixed noise model, where Gaussian-distributed thermal noise at the receiver is also investigated. The closed-form conditional likelihood of received signals is derived using the Laplace transform and the saddle-point approximation method, and the corresponding quasi-maximum-likelihood (quasi-ML) detector is proposed. Furthermore, the Poisson-Gaussian-distributed signals are converted to Gaussian variables with the aid of the generalized Anscombe transform (GAT), leading to an equivalent additive white Gaussian noise (AWGN) channel, and a hard-decision-based detector is invoked. Simulation results demonstrate that, the proposed GAT-based detector can reduce the computational complexity with marginal performance loss compared with the proposed quasi-ML detector, and both detectors are capable of accurately demodulating the SPAD-based PAM signals.

  4. Model of beam head erosion

    SciTech Connect

    Lee, E.P.

    1980-08-08

    An analytical model of beam head dynamics is presented, leading to an estimate of the erosion rate due to the combined effects of Ohmic dissipation and scattering. Agreement with the results of a computer simulation and detailed one-dimensional computations is good in all respects except for the scaling of the erosion rate with net current.

  5. Modelling and Evaluation of Spectra in Beam Aided Spectroscopy

    SciTech Connect

    Hellermann, M. G. von; Delabie, E.; Jaspers, R.; Lotte, P.; Summers, H. P.

    2008-10-22

    The evaluation of active beam induced spectra requires advanced modelling of both active and passive features. Three types of line shapes are addressed in this paper: Thermal spectra representing Maxwellian distribution functions described by Gaussian-like line shapes, secondly broad-band fast ion spectra with energies well above local ion temperatures, and, finally, the narrow lines shapes of the equi-spaced Motion Stark multiplet (MSE) of excited neutral beam particles travelling through the magnetic field confining the plasma. In each case additional line shape broadening caused by Gaussian-like instrument functions is taken into account. Further broadening effects are induced by collision velocity dependent effective atomic rates where the observed spectral shape is the result of a convolution of emission rate function and velocity distribution function projected into the direction of observation. In the case of Beam Emission Spectroscopy which encompasses the Motional Stark features, line broadening is also caused by the finite angular spread of injected neutrals and secondly by a ripple in the acceleration voltage associated with high energy neutral beams.

  6. Secret Key Agreement by Soft-Decision of Signals in Gaussian Maurer's Model

    NASA Astrophysics Data System (ADS)

    Naito, Masashi; Watanabe, Shun; Matsumoto, Ryutaroh; Uyematsu, Tomohiko

    We consider the problem of secret key agreement in Gaussian Maurer's Model. In Gaussian Maurer's model, legitimate receivers, Alice and Bob, and a wire-tapper, Eve, receive signals randomly generated by a satellite through three independent memoryless Gaussian channels respectively. Then Alice and Bob generate a common secret key from their received signals. In this model, we propose a protocol for generating a common secret key by using the result of soft-decision of Alice and Bob's received signals. Then, we calculate a lower bound on the secret key rate in our proposed protocol. As a result of comparison with the protocol that only uses hard-decision, we found that the higher rate is obtained by using our protocol.

  7. Accurate relativistic adapted Gaussian basis sets for francium through Ununoctium without variational prolapse and to be used with both uniform sphere and Gaussian nucleus models.

    PubMed

    Teodoro, Tiago Quevedo; Haiduke, Roberto Luiz Andrade

    2013-10-15

    Accurate relativistic adapted Gaussian basis sets (RAGBSs) for 87 Fr up to 118 Uuo atoms without variational prolapse were developed here with the use of a polynomial version of the Generator Coordinate Dirac-Fock method. Two finite nuclear models have been used, the Gaussian and uniform sphere models. The largest RAGBS error, with respect to numerical Dirac-Fock results, is 15.4 miliHartree for Ununoctium with a basis set size of 33s30p19d14f functions.

  8. Lattice calculation of non-gaussian density perturbations from the massless preheating inflationary model.

    PubMed

    Chambers, Alex; Rajantie, Arttu

    2008-02-01

    If light scalar fields are present at the end of inflation, their nonequilibrium dynamics such as parametric resonance or a phase transition can produce non-Gaussian density perturbations. We show how these perturbations can be calculated using nonlinear lattice field theory simulations and the separate universe approximation. In the massless preheating model, we find that some parameter values are excluded while others lead to acceptable but observable levels of non-Gaussianity. This shows that preheating can be an important factor in assessing the viability of inflationary models.

  9. New deconvolution method for microscopic images based on the continuous Gaussian radial basis function interpolation model.

    PubMed

    Chen, Zhaoxue; Chen, Hao

    2014-01-01

    A deconvolution method based on the Gaussian radial basis function (GRBF) interpolation is proposed. Both the original image and Gaussian point spread function are expressed as the same continuous GRBF model, thus image degradation is simplified as convolution of two continuous Gaussian functions, and image deconvolution is converted to calculate the weighted coefficients of two-dimensional control points. Compared with Wiener filter and Lucy-Richardson algorithm, the GRBF method has an obvious advantage in the quality of restored images. In order to overcome such a defect of long-time computing, the method of graphic processing unit multithreading or increasing space interval of control points is adopted, respectively, to speed up the implementation of GRBF method. The experiments show that based on the continuous GRBF model, the image deconvolution can be efficiently implemented by the method, which also has a considerable reference value for the study of three-dimensional microscopic image deconvolution.

  10. Solid-liquid phase equilibria of the Gaussian core model fluid.

    PubMed

    Mausbach, Peter; Ahmed, Alauddin; Sadus, Richard J

    2009-11-14

    The solid-liquid phase equilibria of the Gaussian core model are determined using the GWTS [J. Ge, G.-W. Wu, B. D. Todd, and R. J. Sadus, J. Chem. Phys. 119, 11017 (2003)] algorithm, which combines equilibrium and nonequilibrium molecular dynamics simulations. This is the first reported use of the GWTS algorithm for a fluid system displaying a reentrant melting scenario. Using the GWTS algorithm, the phase envelope of the Gaussian core model can be calculated more precisely than previously possible. The results for the low-density and the high-density (reentrant melting) sides of the solid state are in good agreement with those obtained by Monte Carlo simulations in conjunction with calculations of the solid free energies. The common point on the Gaussian core envelope, where equal-density solid and liquid phases are in coexistence, could be determined with high precision.

  11. Modelling non-Gaussianity of background and observational errors by the Maximum Entropy method

    NASA Astrophysics Data System (ADS)

    Pires, Carlos; Talagrand, Olivier; Bocquet, Marc

    2010-05-01

    The Best Linear Unbiased Estimator (BLUE) has widely been used in atmospheric-oceanic data assimilation. However, when data errors have non-Gaussian pdfs, the BLUE differs from the absolute Minimum Variance Unbiased Estimator (MVUE), minimizing the mean square analysis error. The non-Gaussianity of errors can be due to the statistical skewness and positiveness of some physical observables (e.g. moisture, chemical species) or due to the nonlinearity of the data assimilation models and observation operators acting on Gaussian errors. Non-Gaussianity of assimilated data errors can be justified from a priori hypotheses or inferred from statistical diagnostics of innovations (observation minus background). Following this rationale, we compute measures of innovation non-Gaussianity, namely its skewness and kurtosis, relating it to: a) the non-Gaussianity of the individual error themselves, b) the correlation between nonlinear functions of errors, and c) the heteroscedasticity of errors within diagnostic samples. Those relationships impose bounds for skewness and kurtosis of errors which are critically dependent on the error variances, thus leading to a necessary tuning of error variances in order to accomplish consistency with innovations. We evaluate the sub-optimality of the BLUE as compared to the MVUE, in terms of excess of error variance, under the presence of non-Gaussian errors. The error pdfs are obtained by the maximum entropy method constrained by error moments up to fourth order, from which the Bayesian probability density function and the MVUE are computed. The impact is higher for skewed extreme innovations and grows in average with the skewness of data errors, especially if those skewnesses have the same sign. Application has been performed to the quality-accepted ECMWF innovations of brightness temperatures of a set of High Resolution Infrared Sounder channels. In this context, the MVUE has led in some extreme cases to a potential reduction of 20-60% error

  12. 'The formula that killed Wall Street': the Gaussian copula and modelling practices in investment banking.

    PubMed

    MacKenzie, Donald; Spears, Taylor

    2014-06-01

    Drawing on documentary sources and 114 interviews with market participants, this and a companion article discuss the development and use in finance of the Gaussian copula family of models, which are employed to estimate the probability distribution of losses on a pool of loans or bonds, and which were centrally involved in the credit crisis. This article, which explores how and why the Gaussian copula family developed in the way it did, employs the concept of 'evaluation culture', a set of practices, preferences and beliefs concerning how to determine the economic value of financial instruments that is shared by members of multiple organizations. We identify an evaluation culture, dominant within the derivatives departments of investment banks, which we call the 'culture of no-arbitrage modelling', and explore its relation to the development of Gaussian copula models. The article suggests that two themes from the science and technology studies literature on models (modelling as 'impure' bricolage, and modelling as articulating with heterogeneous objectives and constraints) help elucidate the history of Gaussian copula models in finance.

  13. Scintillation of nonuniformly correlated beams in atmospheric turbulence.

    PubMed

    Gu, Yalong; Gbur, Greg

    2013-05-01

    We investigated the scintillation properties of nonuniformly correlated (NUC) beams in atmospheric turbulence and have shown that NUC beams can not only have lower scintillation but also higher intensity than Gaussian-Schell model beams and even higher intensity than coherent Gaussian beams over certain propagation distances.

  14. Modeling Multi-Variate Gaussian Distributions and Analysis of Higgs Boson Couplings with the ATLAS Detector

    NASA Astrophysics Data System (ADS)

    Krohn, Olivia; Armbruster, Aaron; Gao, Yongsheng; Atlas Collaboration

    2017-01-01

    Software tools developed for the purpose of modeling CERN LHC pp collision data to aid in its interpretation are presented. Some measurements are not adequately described by a Gaussian distribution; thus an interpretation assuming Gaussian uncertainties will inevitably introduce bias, necessitating analytical tools to recreate and evaluate non-Gaussian features. One example is the measurements of Higgs boson production rates in different decay channels, and the interpretation of these measurements. The ratios of data to Standard Model expectations (μ) for five arbitrary signals were modeled by building five Poisson distributions with mixed signal contributions such that the measured values of μ are correlated. Algorithms were designed to recreate probability distribution functions of μ as multi-variate Gaussians, where the standard deviation (σ) and correlation coefficients (ρ) are parametrized. There was good success with modeling 1-D likelihood contours of μ, and the multi-dimensional distributions were well modeled within 1- σ but the model began to diverge after 2- σ due to unmerited assumptions in developing ρ. Future plans to improve the algorithms and develop a user-friendly analysis package will also be discussed. NSF International Research Experiences for Students

  15. Minimal model of stochastic athermal systems: origin of non-Gaussian noise.

    PubMed

    Kanazawa, Kiyoshi; Sano, Tomohiko G; Sagawa, Takahiro; Hayakawa, Hisao

    2015-03-06

    For a wide class of stochastic athermal systems, we derive Langevin-like equations driven by non-Gaussian noise, starting from master equations and developing a new asymptotic expansion. We found an explicit condition whereby the non-Gaussian properties of the athermal noise become dominant for tracer particles associated with both thermal and athermal environments. Furthermore, we derive an inverse formula to infer microscopic properties of the athermal bath from the statistics of the tracer particle. We apply our formulation to a granular motor under viscous friction and analytically obtain the angular velocity distribution function. Our theory demonstrates that the non-Gaussian Langevin equation is the minimal model of athermal systems.

  16. Non-Gaussian density fluctuations from entropically generated curvature perturbations in ekpyrotic models

    SciTech Connect

    Lehners, Jean-Luc; Steinhardt, Paul J.

    2008-03-15

    We analyze the non-Gaussian density perturbations generated in ekpyrotic/cyclic models based on heterotic M theory. In this picture, two scalar fields produce nearly scale-invariant entropic perturbations during an ekpyrotic phase that are converted into curvature modes after the ekpyrotic phase is complete and just before the big bang. Both intrinsic nonlinearity in the entropy perturbation and the conversion process contribute to non-Gaussianity. The range of the non-Gaussianity parameter f{sub NL} depends on how gradual the conversion process is and the steepness of the scalar field potential during the ekpyrotic phase. Although a wider range is possible, in principle, natural values of the ekpyrotic parameters combined with a gradual conversion process lead to values of -50 < or approx. f{sub NL} < or approx. +200, typically much greater than slow-roll inflation but within the current observational bounds.

  17. Propagation factors of multi-sinc Schell-model beams in non-Kolmogorov turbulence.

    PubMed

    Song, Zhenzhen; Liu, Zhengjun; Zhou, Keya; Sun, Qiongge; Liu, Shutian

    2016-01-25

    We derive several analytical expressions for the root-mean-square (rms) angular width and the M(2)-factor of the multi-sinc Schell-model (MSSM) beams propagating in non-Kolmogorov turbulence with the extended Huygens-Fresnel principle and the second-order moments of the Wigner distribution function. Numerical results show that a MSSM beam with dark-hollow far fields in free space has advantage over the one with flat-topped or multi-rings far fields for reducing the turbulence-induced degradation, which will become more obvious with larger dark-hollow size. Beam quality of MSSM beams can be further improved with longer wavelength and larger beam width, or under the condition of weaker turbulence. We also demonstrate that the non-Kolmogorov turbulence has significantly less effect on the MSSM beams than the Gaussian Schell-model beam.

  18. Kinect Posture Reconstruction Based on a Local Mixture of Gaussian Process Models.

    PubMed

    Liu, Zhiguang; Zhou, Liuyang; Leung, Howard; Shum, Hubert P H

    2016-11-01

    Depth sensor based 3D human motion estimation hardware such as Kinect has made interactive applications more popular recently. However, it is still challenging to accurately recognize postures from a single depth camera due to the inherently noisy data derived from depth images and self-occluding action performed by the user. In this paper, we propose a new real-time probabilistic framework to enhance the accuracy of live captured postures that belong to one of the action classes in the database. We adopt the Gaussian Process model as a prior to leverage the position data obtained from Kinect and marker-based motion capture system. We also incorporate a temporal consistency term into the optimization framework to constrain the velocity variations between successive frames. To ensure that the reconstructed posture resembles the accurate parts of the observed posture, we embed a set of joint reliability measurements into the optimization framework. A major drawback of Gaussian Process is its cubic learning complexity when dealing with a large database due to the inverse of a covariance matrix. To solve the problem, we propose a new method based on a local mixture of Gaussian Processes, in which Gaussian Processes are defined in local regions of the state space. Due to the significantly decreased sample size in each local Gaussian Process, the learning time is greatly reduced. At the same time, the prediction speed is enhanced as the weighted mean prediction for a given sample is determined by the nearby local models only. Our system also allows incrementally updating a specific local Gaussian Process in real time, which enhances the likelihood of adapting to run-time postures that are different from those in the database. Experimental results demonstrate that our system can generate high quality postures even under severe self-occlusion situations, which is beneficial for real-time applications such as motion-based gaming and sport training.

  19. Intuitive understanding of non-Gaussianity in ekpyrotic and cyclic models

    SciTech Connect

    Lehners, Jean-Luc; Steinhardt, Paul J.

    2008-07-15

    It has been pointed out by several groups that ekpyrotic and cyclic models generate significant non-Gaussianity. In this paper, we present a physically intuitive, semianalytic estimate of the bispectrum. We show that, in all such models, there is an intrinsic contribution to the non-Gaussianity parameter f{sub NL} that is determined by the geometric mean of the equation of state w{sub ek} during the ekpyrotic phase and w{sub c} during the phase that curvature perturbations are generated, and whose value is O(100) or more times the intrinsic value predicted by simple slow-roll inflationary models, f{sub NL}{sup intrinsic}=O(0.1). Other contributions to f{sub NL}, which we also estimate, can increase |f{sub NL}| but are unlikely to decrease it significantly, making non-Gaussianity a useful test of these models. Furthermore, we discuss a predicted correlation between the non-Gaussianity and scalar spectral index that sharpens the test.

  20. The Holstein-Hubbard model with Gaussian anharmonicity in one-dimension at half filling

    NASA Astrophysics Data System (ADS)

    Lavanya, Ch. Uma; Chatterjee, Ashok

    2016-05-01

    The Holstein-Hubbard model(HHM) with Gaussian anharmonicityis studied at half filling in one-dimension using a variational method based on a series of canonical transformations. It is shown that the anharmonicityincreases the width of the intermediate metallic phase at the SDW-CDW crossover region.

  1. Develop an X-Windows Tool to Compute Gaussian Beam Synthetic Seismograms

    DTIC Science & Technology

    2007-11-02

    through the medium. A second module, called GBseis, reads the raytracing results created by Xgb and computes synthetic seismograms according to...allow raytracing results and velocity models to be stored within an Oracle database like that which exists within the software environment at the...Figure 1 the position of two receivers at x=4000 and x=4200 km respectively can just be seen. The results of dynamic raytracing have been preserved

  2. Tuning the optical orbital angular momentum of a focused Gaussian beam in an optical supperlattice under the electro-optic effect

    NASA Astrophysics Data System (ADS)

    Wang, Jie; Shi, Jianhong; Tian, Linghao; Chen, Xianfeng

    2012-04-01

    In this paper, we theoretically propose a new method to generate and tune the optical orbital angular momentum. A focused Gaussian beam passing through an optical superlattice under the electro-optic effect carries orbital angular momentum (OAM). This kind of OAM arises from the curl of the polarization. By adjusting the external electric field, the beam waist radius and the crystal length, we can obtain a dramatic variation of the OAM across the output light transverse section. This invention will find applications in the area of optical manipulation.

  3. Contaminant dispersion prediction and source estimation with integrated Gaussian-machine learning network model for point source emission in atmosphere.

    PubMed

    Ma, Denglong; Zhang, Zaoxiao

    2016-07-05

    Gas dispersion model is important for predicting the gas concentrations when contaminant gas leakage occurs. Intelligent network models such as radial basis function (RBF), back propagation (BP) neural network and support vector machine (SVM) model can be used for gas dispersion prediction. However, the prediction results from these network models with too many inputs based on original monitoring parameters are not in good agreement with the experimental data. Then, a new series of machine learning algorithms (MLA) models combined classic Gaussian model with MLA algorithm has been presented. The prediction results from new models are improved greatly. Among these models, Gaussian-SVM model performs best and its computation time is close to that of classic Gaussian dispersion model. Finally, Gaussian-MLA models were applied to identifying the emission source parameters with the particle swarm optimization (PSO) method. The estimation performance of PSO with Gaussian-MLA is better than that with Gaussian, Lagrangian stochastic (LS) dispersion model and network models based on original monitoring parameters. Hence, the new prediction model based on Gaussian-MLA is potentially a good method to predict contaminant gas dispersion as well as a good forward model in emission source parameters identification problem.

  4. Mixed-effects Gaussian process functional regression models with application to dose-response curve prediction.

    PubMed

    Shi, J Q; Wang, B; Will, E J; West, R M

    2012-11-20

    We propose a new semiparametric model for functional regression analysis, combining a parametric mixed-effects model with a nonparametric Gaussian process regression model, namely a mixed-effects Gaussian process functional regression model. The parametric component can provide explanatory information between the response and the covariates, whereas the nonparametric component can add nonlinearity. We can model the mean and covariance structures simultaneously, combining the information borrowed from other subjects with the information collected from each individual subject. We apply the model to dose-response curves that describe changes in the responses of subjects for differing levels of the dose of a drug or agent and have a wide application in many areas. We illustrate the method for the management of renal anaemia. An individual dose-response curve is improved when more information is included by this mechanism from the subject/patient over time, enabling a patient-specific treatment regime.

  5. Machine learning for molecular scattering dynamics: Gaussian Process models for improved predictions of molecular collision observables

    NASA Astrophysics Data System (ADS)

    Krems, Roman; Cui, Jie; Li, Zhiying

    2016-05-01

    We show how statistical learning techniques based on kriging (Gaussian Process regression) can be used for improving the predictions of classical and/or quantum scattering theory. In particular, we show how Gaussian Process models can be used for: (i) efficient non-parametric fitting of multi-dimensional potential energy surfaces without the need to fit ab initio data with analytical functions; (ii) obtaining scattering observables as functions of individual PES parameters; (iii) using classical trajectories to interpolate quantum results; (iv) extrapolation of scattering observables from one molecule to another; (v) obtaining scattering observables with error bars reflecting the inherent inaccuracy of the underlying potential energy surfaces. We argue that the application of Gaussian Process models to quantum scattering calculations may potentially elevate the theoretical predictions to the same level of certainty as the experimental measurements and can be used to identify the role of individual atoms in determining the outcome of collisions of complex molecules. We will show examples and discuss the applications of Gaussian Process models to improving the predictions of scattering theory relevant for the cold molecules research field. Work supported by NSERC of Canada.

  6. Effect of the transverse magnetic field on spatiotemporal dynamics of quadruple Gaussian laser beam in plasma in weakly relativistic and ponderomotive regime

    NASA Astrophysics Data System (ADS)

    Vij, Shivani; Gill, Tarsem Singh; Aggarwal, Munish

    2016-12-01

    The spatiotemporal dynamics of a quadruple Gaussian laser beam in plasma is studied in the presence of an external magnetic field by taking into account the relativistic and ponderomotive nonlinearities. Using the paraxial approximation approach, two coupled equations for longitudinal (in time) and transverse (in space) beam width parameters are derived. Their evolution determines the pulse dynamics in time and space. The effects of the initial laser parameters, such as the lateral separation and laser intensity on self-focusing and self-compression mechanisms, are discussed. The results illustrate that the laser beam is focussed and compressed in an enhanced manner in the presence of an external magnetic field. The three dimensional spatiotemporal profile of the normalized intensity of the pulse is studied at different positions where the beam is either focussed or compressed. A three dimensional portrait of the normalized intensity as a function of distance and time is also shown.

  7. A Non-Gaussian Stock Price Model: Options, Credit and a Multi-Timescale Memory

    NASA Astrophysics Data System (ADS)

    Borland, L.

    We review a recently proposed model of stock prices, based on astatistical feedback model that results in a non-Gaussian distribution of price changes. Applications to option pricing and the pricing of debt is discussed. A generalization to account for feedback effects over multiple timescales is also presented. This model reproduces most of the stylized facts (ie statistical anomalies) observed in real financial markets.

  8. A Framework for Non-Gaussian Signal Modeling and Estimation

    DTIC Science & Technology

    1999-06-01

    1993. [38] B. P. Carlin , N. G. Polson, and D. S. Stoffer, "A Monte Carlo approach to nonnormal and nonlinear state-space modeling," Journal of the...NJ: Prentice-Hall, 1992. [198] J. R. Thompson, Empirical Model Building. New York: John Wiley & Sons, 1989. [199] J. R. Thompson and R. A. Tapia

  9. Bayes factor between Student t and Gaussian mixed models within an animal breeding context

    PubMed Central

    Casellas, Joaquim; Ibáñez-Escriche, Noelia; García-Cortés, Luis Alberto; Varona, Luis

    2008-01-01

    The implementation of Student t mixed models in animal breeding has been suggested as a useful statistical tool to effectively mute the impact of preferential treatment or other sources of outliers in field data. Nevertheless, these additional sources of variation are undeclared and we do not know whether a Student t mixed model is required or if a standard, and less parameterized, Gaussian mixed model would be sufficient to serve the intended purpose. Within this context, our aim was to develop the Bayes factor between two nested models that only differed in a bounded variable in order to easily compare a Student t and a Gaussian mixed model. It is important to highlight that the Student t density converges to a Gaussian process when degrees of freedom tend to infinity. The twomodels can then be viewed as nested models that differ in terms of degrees of freedom. The Bayes factor can be easily calculated from the output of a Markov chain Monte Carlo sampling of the complex model (Student t mixed model). The performance of this Bayes factor was tested under simulation and on a real dataset, using the deviation information criterion (DIC) as the standard reference criterion. The two statistical tools showed similar trends along the parameter space, although the Bayes factor appeared to be the more conservative. There was considerable evidence favoring the Student t mixed model for data sets simulated under Student t processes with limited degrees of freedom, and moderate advantages associated with using the Gaussian mixed model when working with datasets simulated with 50 or more degrees of freedom. For the analysis of real data (weight of Pietrain pigs at six months), both the Bayes factor and DIC slightly favored the Student t mixed model, with there being a reduced incidence of outlier individuals in this population. PMID:18558073

  10. Non-Gaussianity in single field models without slow-roll conditions

    NASA Astrophysics Data System (ADS)

    Noller, Johannes; Magueijo, João

    2011-05-01

    We investigate non-Gaussianity in general single field models without assuming slow-roll conditions or the exact scale invariance of the scalar power spectrum. The models considered include general single field inflation (e.g. Dirac-Born-Infeld and canonical inflation) as well as bimetric models. We compute the full non-Gaussian amplitude A, its size fNL, its shape, and the running with scale nNG. In doing so we show that observational constraints allow significant violations of slow-roll conditions and we derive explicit bounds on slow-roll parameters for fast-roll single field scenarios. A variety of new observational signatures is found for models respecting these bounds. We also explicitly construct concrete model implementations giving rise to this new phenomenology.

  11. Self-focusing and defocusing of Gaussian laser beams in collisional underdense magnetized plasmas with considering the nonlinear ohmic heating and ponderomotive force effects

    SciTech Connect

    Ettehadi Abari, Mehdi; Sedaghat, Mahsa; Shokri, Babak

    2015-10-15

    The propagation characteristics of a Gaussian laser beam in collisional magnetized plasma are investigated by considering the ponderomotive and ohmic heating nonlinearities. Here, by taking into account the effect of the external magnetic field, the second order differential equation of the dimensionless beam width parameter is solved numerically. Furthermore, the nonlinear dielectric permittivity of the mentioned plasma medium in the paraxial approximation and its dependence on the propagation characteristics of the Gaussian laser pulse is obtained, and its variation in terms of the dimensionless plasma length is analyzed at different initial normalized plasma and cyclotron frequencies. The results show that the dimensionless beam width parameter is strongly affected by the initial plasma frequency, magnetic strength, and laser pulse intensity. Furthermore, it is found that there exists a certain intensity value below which the laser pulse tends to self focus, while the beam diverges above of this value. In addition, the results confirm that, by increasing the plasma and cyclotron frequencies (plasma density and magnetic strength), the self-focusing effect can occur intensively.

  12. TH-C-BRD-02: Analytical Modeling and Dose Calculation Method for Asymmetric Proton Pencil Beams

    SciTech Connect

    Gelover, E; Wang, D; Hill, P; Flynn, R; Hyer, D

    2014-06-15

    Purpose: A dynamic collimation system (DCS), which consists of two pairs of orthogonal trimmer blades driven by linear motors has been proposed to decrease the lateral penumbra in pencil beam scanning proton therapy. The DCS reduces lateral penumbra by intercepting the proton pencil beam near the lateral boundary of the target in the beam's eye view. The resultant trimmed pencil beams are asymmetric and laterally shifted, and therefore existing pencil beam dose calculation algorithms are not capable of trimmed beam dose calculations. This work develops a method to model and compute dose from trimmed pencil beams when using the DCS. Methods: MCNPX simulations were used to determine the dose distributions expected from various trimmer configurations using the DCS. Using these data, the lateral distribution for individual beamlets was modeled with a 2D asymmetric Gaussian function. The integral depth dose (IDD) of each configuration was also modeled by combining the IDD of an untrimmed pencil beam with a linear correction factor. The convolution of these two terms, along with the Highland approximation to account for lateral growth of the beam along the depth direction, allows a trimmed pencil beam dose distribution to be analytically generated. The algorithm was validated by computing dose for a single energy layer 5×5 cm{sup 2} treatment field, defined by the trimmers, using both the proposed method and MCNPX beamlets. Results: The Gaussian modeled asymmetric lateral profiles along the principal axes match the MCNPX data very well (R{sup 2}≥0.95 at the depth of the Bragg peak). For the 5×5 cm{sup 2} treatment plan created with both the modeled and MCNPX pencil beams, the passing rate of the 3D gamma test was 98% using a standard threshold of 3%/3 mm. Conclusion: An analytical method capable of accurately computing asymmetric pencil beam dose when using the DCS has been developed.

  13. Gaussian process modelling for uncertainty quantification in convectively-enhanced dissolution processes in porous media

    NASA Astrophysics Data System (ADS)

    Crevillén-García, D.; Wilkinson, R. D.; Shah, A. A.; Power, H.

    2017-01-01

    Numerical groundwater flow and dissolution models of physico-chemical processes in deep aquifers are usually subject to uncertainty in one or more of the model input parameters. This uncertainty is propagated through the equations and needs to be quantified and characterised in order to rely on the model outputs. In this paper we present a Gaussian process emulation method as a tool for performing uncertainty quantification in mathematical models for convection and dissolution processes in porous media. One of the advantages of this method is its ability to significantly reduce the computational cost of an uncertainty analysis, while yielding accurate results, compared to classical Monte Carlo methods. We apply the methodology to a model of convectively-enhanced dissolution processes occurring during carbon capture and storage. In this model, the Gaussian process methodology fails due to the presence of multiple branches of solutions emanating from a bifurcation point, i.e., two equilibrium states exist rather than one. To overcome this issue we use a classifier as a precursor to the Gaussian process emulation, after which we are able to successfully perform a full uncertainty analysis in the vicinity of the bifurcation point.

  14. Generation of Ensemble Precipitation Forecasts From Single-Value QPF via Mixed-Type Meta-Gaussian Model

    NASA Astrophysics Data System (ADS)

    Wu, L.; Seo, D.; Demargne, J.; Brown, J. D.

    2008-12-01

    In this presentation, we describe generation of ensemble precipitation forecasts from single-value quantitative precipitation forecasts (QPF) via the mixed-type bivariate meta-Gaussian model (Herr and Krzysztofowicz 2005). Because of the intermittent nature of precipitation, it is necessary to model precipitation amount as a mixed variable. The joint distribution of single-value QPF and observed precipitation amounts may then be modeled by the mixed-type bivariate meta-Gaussian distribution. From the single-value QPF, one may generate ensemble precipitation forecasts by sampling from the conditional distribution of the mixed-type bivariate meta-Gaussian distribution. The marginal distributions of the meta-Gaussian distribution are estimated using the Gaussian kernel smoothing technique with a plug-in bandwidth selection procedure. This methodology attempts to capture the skill and uncertainty in the QPF. We present both dependent and independent validation results for selected river basins in the AB-, CN-, and MA-RFC areas.

  15. An adaptive Gaussian model for satellite image deblurring.

    PubMed

    Jalobeanu, André; Blanc-Féraud, Laure; Zerubia, Josiane

    2004-04-01

    The deconvolution of blurred and noisy satellite images is an ill-posed inverse problem, which can be regularized within a Bayesian context by using an a priori model of the reconstructed solution. Since real satellite data show spatially variant characteristics, we propose here to use an inhomogeneous model. We use the maximum likelihood estimator (MLE) to estimate its parameters and we show that the MLE computed on the corrupted image is not suitable for image deconvolution because it is not robust to noise. We then show that the estimation is correct only if it is made from the original image. Since this image is unknown, we need to compute an approximation of sufficiently good quality to provide useful estimation results. Such an approximation is provided by a wavelet-based deconvolution algorithm. Thus, a hybrid method is first used to estimate the space-variant parameters from this image and then to compute the regularized solution. The obtained results on high resolution satellite images simultaneously exhibit sharp edges, correctly restored textures, and a high SNR in homogeneous areas, since the proposed technique adapts to the local characteristics of the data.

  16. Electromagnetic nonuniformly correlated beams.

    PubMed

    Tong, Zhisong; Korotkova, Olga

    2012-10-01

    A class of electromagnetic sources with nonuniformly distributed field correlations is introduced. The conditions on source parameters guaranteeing that the source generates a physical beam are derived. It is shown that the new sources are capable of producing beams with polarization properties that evolve on propagation in a manner much more complex compared to the well-known electromagnetic Gaussian Schell-model beams.

  17. Novel Methods for Surface EMG Analysis and Exploration Based on Multi-Modal Gaussian Mixture Models

    PubMed Central

    Vögele, Anna Magdalena; Zsoldos, Rebeka R.; Krüger, Björn; Licka, Theresia

    2016-01-01

    This paper introduces a new method for data analysis of animal muscle activation during locomotion. It is based on fitting Gaussian mixture models (GMMs) to surface EMG data (sEMG). This approach enables researchers/users to isolate parts of the overall muscle activation within locomotion EMG data. Furthermore, it provides new opportunities for analysis and exploration of sEMG data by using the resulting Gaussian modes as atomic building blocks for a hierarchical clustering. In our experiments, composite peak models representing the general activation pattern per sensor location (one sensor on the long back muscle, three sensors on the gluteus muscle on each body side) were identified per individual for all 14 horses during walk and trot in the present study. Hereby we show the applicability of the method to identify composite peak models, which describe activation of different muscles throughout cycles of locomotion. PMID:27362752

  18. Gaussian estimation for discretely observed Cox-Ingersoll-Ross model

    NASA Astrophysics Data System (ADS)

    Wei, Chao; Shu, Huisheng; Liu, Yurong

    2016-07-01

    This paper is concerned with the parameter estimation problem for Cox-Ingersoll-Ross model based on discrete observation. First, a new discretized process is built based on the Euler-Maruyama scheme. Then, the parameter estimators are obtained by employing the maximum likelihood method and the explicit expressions of the error of estimation are given. Subsequently, the consistency property of all parameter estimators are proved by applying the law of large numbers for martingales, Holder's inequality, B-D-G inequality and Cauchy-Schwarz inequality. Finally, a numerical simulation example for estimators and the absolute error between estimators and true values is presented to demonstrate the effectiveness of the estimation approach used in this paper.

  19. Unsupervised Change Detection in SAR Images Using Gaussian Mixture Models

    NASA Astrophysics Data System (ADS)

    Kiana, E.; Homayouni, S.; Sharifi, M. A.; Farid-Rohani, M.

    2015-12-01

    In this paper, we propose a method for unsupervised change detection in Remote Sensing Synthetic Aperture Radar (SAR) images. This method is based on the mixture modelling of the histogram of difference image. In this process, the difference image is classified into three classes; negative change class, positive change class and no change class. However the SAR images suffer from speckle noise, the proposed method is able to map the changes without speckle filtering. To evaluate the performance of this method, two dates of SAR data acquired by Uninhabited Aerial Vehicle Synthetic from an agriculture area are used. Change detection results show better efficiency when compared to the state-of-the-art methods.

  20. Alternating direction methods for latent variable gaussian graphical model selection.

    PubMed

    Ma, Shiqian; Xue, Lingzhou; Zou, Hui

    2013-08-01

    Chandrasekaran, Parrilo, and Willsky (2012) proposed a convex optimization problem for graphical model selection in the presence of unobserved variables. This convex optimization problem aims to estimate an inverse covariance matrix that can be decomposed into a sparse matrix minus a low-rank matrix from sample data. Solving this convex optimization problem is very challenging, especially for large problems. In this letter, we propose two alternating direction methods for solving this problem. The first method is to apply the classic alternating direction method of multipliers to solve the problem as a consensus problem. The second method is a proximal gradient-based alternating-direction method of multipliers. Our methods take advantage of the special structure of the problem and thus can solve large problems very efficiently. A global convergence result is established for the proposed methods. Numerical results on both synthetic data and gene expression data show that our methods usually solve problems with 1 million variables in 1 to 2 minutes and are usually 5 to 35 times faster than a state-of-the-art Newton-CG proximal point algorithm.

  1. Modelling the presence of disease under spatial misalignment using Bayesian latent Gaussian models.

    PubMed

    Barber, Xavier; Conesa, David; Lladosa, Silvia; López-Quílez, Antonio

    2016-04-18

    Modelling patterns of the spatial incidence of diseases using local environmental factors has been a growing problem in the last few years. Geostatistical models have become popular lately because they allow estimating and predicting the underlying disease risk and relating it with possible risk factors. Our approach to these models is based on the fact that the presence/absence of a disease can be expressed with a hierarchical Bayesian spatial model that incorporates the information provided by the geographical and environmental characteristics of the region of interest. Nevertheless, our main interest here is to tackle the misalignment problem arising when information about possible covariates are partially (or totally) different than those of the observed locations and those in which we want to predict. As a result, we present two different models depending on the fact that there is uncertainty on the covariates or not. In both cases, Bayesian inference on the parameters and prediction of presence/absence in new locations are made by considering the model as a latent Gaussian model, which allows the use of the integrated nested Laplace approximation. In particular, the spatial effect is implemented with the stochastic partial differential equation approach. The methodology is evaluated on the presence of the Fasciola hepatica in Galicia, a North-West region of Spain.

  2. Partially coherent nonparaxial beams.

    PubMed

    Duan, Kailiang; Lü, Baida

    2004-04-15

    The concept of a partially coherent nonparaxial beam is proposed. A closed-form expression for the propagation of nonparaxial Gaussian Schell model (GSM) beams in free space is derived and applied to study the propagation properties of nonparaxial GSM beams. It is shown that for partially coherent nonparaxial beams a new parameter f(sigma) has to be introduced, which together with the parameter f, determines the beam nonparaxiality.

  3. mclust 5: Clustering, Classification and Density Estimation Using Gaussian Finite Mixture Models

    PubMed Central

    Scrucca, Luca; Fop, Michael; Murphy, T. Brendan; Raftery, Adrian E.

    2016-01-01

    Finite mixture models are being used increasingly to model a wide variety of random phenomena for clustering, classification and density estimation. mclust is a powerful and popular package which allows modelling of data as a Gaussian finite mixture with different covariance structures and different numbers of mixture components, for a variety of purposes of analysis. Recently, version 5 of the package has been made available on CRAN. This updated version adds new covariance structures, dimension reduction capabilities for visualisation, model selection criteria, initialisation strategies for the EM algorithm, and bootstrap-based inference, making it a full-featured R package for data analysis via finite mixture modelling. PMID:27818791

  4. Gamma, Gaussian and logistic distribution models for airborne pollen grains and fungal spore season dynamics.

    PubMed

    Kasprzyk, I; Walanus, A

    2014-01-01

    The characteristics of a pollen season, such as timing and magnitude, depend on a number of factors such as the biology of the plant and environmental conditions. The main aim of this study was to develop mathematical models that explain dynamics in atmospheric concentrations of pollen and fungal spores recorded in Rzeszów (SE Poland) in 2000-2002. Plant taxa with different characteristics in the timing, duration and curve of their pollen seasons, as well as several fungal taxa were selected for this analysis. Gaussian, gamma and logistic distribution models were examined, and their effectiveness in describing the occurrence of airborne pollen and fungal spores was compared. The Gaussian and differential logistic models were very good at describing pollen seasons with just one peak. These are typically for pollen types with just one dominant species in the flora and when the weather, in particular temperature, is stable during the pollination period. Based on s parameter of the Gaussian function, the dates of the main pollen season can be defined. In spite of the fact that seasonal curves are often characterised by positive skewness, the model based on the gamma distribution proved not to be very effective.

  5. Mean-field dynamic criticality and geometric transition in the Gaussian core model

    NASA Astrophysics Data System (ADS)

    Coslovich, Daniele; Ikeda, Atsushi; Miyazaki, Kunimasa

    2016-04-01

    We use molecular dynamics simulations to investigate dynamic heterogeneities and the potential energy landscape of the Gaussian core model (GCM). Despite the nearly Gaussian statistics of particles' displacements, the GCM exhibits giant dynamic heterogeneities close to the dynamic transition temperature. The divergence of the four-point susceptibility is quantitatively well described by the inhomogeneous version of the mode-coupling theory. Furthermore, the potential energy landscape of the GCM is characterized by large energy barriers, as expected from the lack of activated, hopping dynamics, and display features compatible with a geometric transition. These observations demonstrate that all major features of mean-field dynamic criticality can be observed in a physically sound, three-dimensional model.

  6. Stochastic resonance in a piecewise nonlinear model driven by multiplicative non-Gaussian noise and additive white noise

    NASA Astrophysics Data System (ADS)

    Guo, Yongfeng; Shen, Yajun; Tan, Jianguo

    2016-09-01

    The phenomenon of stochastic resonance (SR) in a piecewise nonlinear model driven by a periodic signal and correlated noises for the cases of a multiplicative non-Gaussian noise and an additive Gaussian white noise is investigated. Applying the path integral approach, the unified colored noise approximation and the two-state model theory, the analytical expression of the signal-to-noise ratio (SNR) is derived. It is found that conventional stochastic resonance exists in this system. From numerical computations we obtain that: (i) As a function of the non-Gaussian noise intensity, the SNR is increased when the non-Gaussian noise deviation parameter q is increased. (ii) As a function of the Gaussian noise intensity, the SNR is decreased when q is increased. This demonstrates that the effect of the non-Gaussian noise on SNR is different from that of the Gaussian noise in this system. Moreover, we further discuss the effect of the correlation time of the non-Gaussian noise, cross-correlation strength, the amplitude and frequency of the periodic signal on SR.

  7. Solving Inverse Problems with Piecewise Linear Estimators: From Gaussian Mixture Models to Structured Sparsity

    DTIC Science & Technology

    2010-06-15

    of-the-art inpainting [31]. Portilla et al. have shown image denoising impressive results June 15, 2010 DRAFT 2 by assuming Gaussian scale mixture...beta and Dirichlet processes, which leads to excellent results in denoising and inpainting [71]. The now popular sparse signal models, on the other...b) (c) (d) Fig. 2. (a) Some typical dictionary atoms learned from the image Lena (Figure 3-(a)) with K- SVD [2]. (b)-(d) A numerical procedure to

  8. Generalized rays in first order optics: transformation properties of Gaussian Schell-model fields

    SciTech Connect

    Simon, R.; Sudarshan, E.C.G.; Mukunda, N.

    1983-09-01

    Propagation characteristics of Gaussian Schell model fields through first order optical systems and in free space are analyzed by the method of generalized rays. This allows the development of a simple geometrical description of these processes. The invariance of the degree of global coherence is established in full generality. Asymptotic behavior under free propagation and the emergence of a far zone universal structure are analyzed. New invariants associated with incoherent superpositions of such fields are found. 19 references.

  9. Generalized rays in first-order optics: Transformation properties of Gaussian Schell-model fields

    SciTech Connect

    Simon, R.; Sudarshan, E.C.G.; Mukunda, N.

    1984-06-01

    Propagation characteristics of Gaussian Schell-model fields through first-order optical systems and in free space are analyzed by the method of generalized rays. This allows the development of a simple geometrical description of these processes. The invariance of the degree of global coherence is established in full generality. Asymptotic behavior under free propagation and the emergence of a far-zone universal structure are analyzed. New invariants associated with incoherent superpositions of such fields are found.

  10. A Rough Set Bounded Spatially Constrained Asymmetric Gaussian Mixture Model for Image Segmentation

    PubMed Central

    Ji, Zexuan; Huang, Yubo; Sun, Quansen; Cao, Guo; Zheng, Yuhui

    2017-01-01

    Accurate image segmentation is an important issue in image processing, where Gaussian mixture models play an important part and have been proven effective. However, most Gaussian mixture model (GMM) based methods suffer from one or more limitations, such as limited noise robustness, over-smoothness for segmentations, and lack of flexibility to fit data. In order to address these issues, in this paper, we propose a rough set bounded asymmetric Gaussian mixture model with spatial constraint for image segmentation. First, based on our previous work where each cluster is characterized by three automatically determined rough-fuzzy regions, we partition the target image into three rough regions with two adaptively computed thresholds. Second, a new bounded indicator function is proposed to determine the bounded support regions of the observed data. The bounded indicator and posterior probability of a pixel that belongs to each sub-region is estimated with respect to the rough region where the pixel lies. Third, to further reduce over-smoothness for segmentations, two novel prior factors are proposed that incorporate the spatial information among neighborhood pixels, which are constructed based on the prior and posterior probabilities of the within- and between-clusters, and considers the spatial direction. We compare our algorithm to state-of-the-art segmentation approaches in both synthetic and real images to demonstrate the superior performance of the proposed algorithm. PMID:28045950

  11. Modeling and forecasting foreign exchange daily closing prices with normal inverse Gaussian

    NASA Astrophysics Data System (ADS)

    Teneng, Dean

    2013-09-01

    We fit the normal inverse Gaussian(NIG) distribution to foreign exchange closing prices using the open software package R and select best models by Käärik and Umbleja (2011) proposed strategy. We observe that daily closing prices (12/04/2008 - 07/08/2012) of CHF/JPY, AUD/JPY, GBP/JPY, NZD/USD, QAR/CHF, QAR/EUR, SAR/CHF, SAR/EUR, TND/CHF and TND/EUR are excellent fits while EGP/EUR and EUR/GBP are good fits with a Kolmogorov-Smirnov test p-value of 0.062 and 0.08 respectively. It was impossible to estimate normal inverse Gaussian parameters (by maximum likelihood; computational problem) for JPY/CHF but CHF/JPY was an excellent fit. Thus, while the stochastic properties of an exchange rate can be completely modeled with a probability distribution in one direction, it may be impossible the other way around. We also demonstrate that foreign exchange closing prices can be forecasted with the normal inverse Gaussian (NIG) Lévy process, both in cases where the daily closing prices can and cannot be modeled by NIG distribution.

  12. EXACT MINIMAX ESTIMATION OF THE PREDICTIVE DENSITY IN SPARSE GAUSSIAN MODELS1

    PubMed Central

    Mukherjee, Gourab; Johnstone, Iain M.

    2015-01-01

    We consider estimating the predictive density under Kullback–Leibler loss in an ℓ0 sparse Gaussian sequence model. Explicit expressions of the first order minimax risk along with its exact constant, asymptotically least favorable priors and optimal predictive density estimates are derived. Compared to the sparse recovery results involving point estimation of the normal mean, new decision theoretic phenomena are seen. Suboptimal performance of the class of plug-in density estimates reflects the predictive nature of the problem and optimal strategies need diversification of the future risk. We find that minimax optimal strategies lie outside the Gaussian family but can be constructed with threshold predictive density estimates. Novel minimax techniques involving simultaneous calibration of the sparsity adjustment and the risk diversification mechanisms are used to design optimal predictive density estimates. PMID:26448678

  13. Multi-level segmentation of passive millimeter wave images with Gaussian mixture modeling

    NASA Astrophysics Data System (ADS)

    Yeom, Seokwon; Lee, Dong-Su; Son, Jung-Young

    2011-05-01

    Passive millimeter wave imaging is very useful for security applications since it candetect objects concealed under clothing. In this paper,the multi-level segmentation of passive millimeter wave images is presented to detectconcealed objects under clothing. Our passive millimeter wave imaging system is equipped with a Cassegrain dish antenna and a receiver channel operating around 3 mm wavelength. The expectation-maximization algorithm is adopted to cluster pixelson the basis ofa Gaussian mixture model. The multi-level segmentation is investigated with different numbers of clusters in Gaussian mixture distribution. The performance is evaluated by average probability error. Experimentsconfirm that the presented method is able to detect the wood grip as well as metal part of the hand axconcealed under clothing.

  14. Revisiting Gaussian Process Regression Modeling for Localization in Wireless Sensor Networks.

    PubMed

    Richter, Philipp; Toledano-Ayala, Manuel

    2015-09-08

    Signal strength-based positioning in wireless sensor networks is a key technology for seamless, ubiquitous localization, especially in areas where Global Navigation Satellite System (GNSS) signals propagate poorly. To enable wireless local area network (WLAN) location fingerprinting in larger areas while maintaining accuracy, methods to reduce the effort of radio map creation must be consolidated and automatized. Gaussian process regression has been applied to overcome this issue, also with auspicious results, but the fit of the model was never thoroughly assessed. Instead, most studies trained a readily available model, relying on the zero mean and squared exponential covariance function, without further scrutinization. This paper studies the Gaussian process regression model selection for WLAN fingerprinting in indoor and outdoor environments. We train several models for indoor/outdoor- and combined areas; we evaluate them quantitatively and compare them by means of adequate model measures, hence assessing the fit of these models directly. To illuminate the quality of the model fit, the residuals of the proposed model are investigated, as well. Comparative experiments on the positioning performance verify and conclude the model selection. In this way, we show that the standard model is not the most appropriate, discuss alternatives and present our best candidate.

  15. Revisiting Gaussian Process Regression Modeling for Localization in Wireless Sensor Networks

    PubMed Central

    Richter, Philipp; Toledano-Ayala, Manuel

    2015-01-01

    Signal strength-based positioning in wireless sensor networks is a key technology for seamless, ubiquitous localization, especially in areas where Global Navigation Satellite System (GNSS) signals propagate poorly. To enable wireless local area network (WLAN) location fingerprinting in larger areas while maintaining accuracy, methods to reduce the effort of radio map creation must be consolidated and automatized. Gaussian process regression has been applied to overcome this issue, also with auspicious results, but the fit of the model was never thoroughly assessed. Instead, most studies trained a readily available model, relying on the zero mean and squared exponential covariance function, without further scrutinization. This paper studies the Gaussian process regression model selection for WLAN fingerprinting in indoor and outdoor environments. We train several models for indoor/outdoor- and combined areas; we evaluate them quantitatively and compare them by means of adequate model measures, hence assessing the fit of these models directly. To illuminate the quality of the model fit, the residuals of the proposed model are investigated, as well. Comparative experiments on the positioning performance verify and conclude the model selection. In this way, we show that the standard model is not the most appropriate, discuss alternatives and present our best candidate. PMID:26370996

  16. Incorporating a Gaussian model at the catheter tip for improved registration of preoperative surface models

    NASA Astrophysics Data System (ADS)

    Rettmann, M. E.; Holmes, D. R., III; Packer, D. L.; Robb, R. A.

    2011-03-01

    Atrial fibrillation is a common cardiac arrhythmia in which aberrant electrical activity cause the atria to quiver which results in irregular beating of the heart. Catheter ablation therapy is becoming increasingly popular in treating atrial fibrillation, a procedure in which an electrophysiologist guides a catheter into the left atrium and creates radiofrequency lesions to stop the arrhythmia. Typical visualization tools include bi-plane fluoroscopy, 2-D ultrasound, and electroanatomic maps, however, recently there has been increased interest in incorporating preoperative surface models into the procedure. Typical strategies for registration include landmark-based and surface-based methods. Drawbacks of these approaches include difficulty in accurately locating corresponding landmark pairs and the time required to sample surface points with a catheter. In this paper, we describe a new approach which models the catheter tip as a Gaussian kernel and eliminates the need to collect surface points by instead using the stream of continuosly tracked catheter points. We demonstrate the feasibility of this technique with a left atrial phantom model and compare the results with a standard surface based approach.

  17. Hierarchical inverse Gaussian models and multiple testing: application to gene expression data.

    PubMed

    Labbe, Aurelie; Thompson, Mary

    2005-01-01

    Detecting differentially expressed genes in microarray experiments is a topic that has been well studied in the literature. Many hypothesis testing methods have been proposed that rely on strong distributional assumptions for the gene intensities. However, the shape of microarray data may vary substantially from one experiment to another, and model assumptions may be seriously violated in many cases. The literature on microarray data is mainly based on two distributions: the log-normal and the gamma distributions, that often appear to be effective when used in a Bayesian hierarchical framework. However, if a model that fits the data well in a global manner seems attractive, two points should be regarded with attention: the ability of the model to fit the tail of the observed distribution, and its robustness to a wrong specification of the model, in terms of error rates for the hypothesis tests. In order to focus on these aspects, we propose to use Bayesian models involving the inverse Gaussian distribution to describe gene expression data. We show that these models can be good competitors to the traditional Bayesian or random effect gamma or log-normal models in some situations. A multiple testing procedure is then proposed, based on an asymptotic property of the posterior probability of the one-sided alternative hypothesis. We show that the asymptotic property is well approximated for inverse Gaussian models, even when the number of observations available for each test is very small.

  18. The Rician inverse Gaussian distribution: a new model for non-Rayleigh signal amplitude statistics.

    PubMed

    Eltoft, Torbjørn

    2005-11-01

    In this paper, we introduce a new statistical distribution for modeling non-Rayleigh amplitude statistics, which we have called the Rician inverse Gaussian (RiIG) distribution. It is a mixture of the Rice distribution and the inverse Gaussian distribution. The probability density function (pdf) is given in closed form as a function of three parameters. This makes the pdf very flexible in the sense that it may be fitted to a variety of shapes, ranging from the Rayleigh-shaped pdf to a noncentral chi2-shaped pdf. The theoretical basis of the new model is quite thoroughly discussed, and we also give two iterative algorithms for estimating its parameters from data. Finally, we include some modeling examples, where we have tested the ability of the distribution to represent locale amplitude histograms of linear medical ultrasound data and single-look synthetic aperture radar data. We compare the goodness of fit of the RiIG model with that of the K model, and, in most cases, the new model turns out as a better statistical model for the data. We also include a series of log-likelihood tests to evaluate the predictive performance of the proposed model.

  19. Factors influencing separation distances against odour annoyance calculated by Gaussian and Lagrangian dispersion models

    NASA Astrophysics Data System (ADS)

    Piringer, Martin; Knauder, Werner; Petz, Erwin; Schauberger, Günther

    2016-09-01

    Direction-dependent separation distances to avoid odour annoyance, calculated with the Gaussian Austrian Odour Dispersion Model AODM and the Lagrangian particle diffusion model LASAT at two sites, are analysed and compared. The relevant short-term peak odour concentrations are calculated with a stability-dependent peak-to-mean algorithm. The same emission and meteorological data, but model-specific atmospheric stability classes are used. The estimate of atmospheric stability is obtained from three-axis ultrasonic anemometers using the standard deviations of the three wind components and the Obukhov stability parameter. The results are demonstrated for the Austrian villages Reidling and Weissbach with very different topographical surroundings and meteorological conditions. Both the differences in the wind and stability regimes as well as the decrease of the peak-to-mean factors with distance lead to deviations in the separation distances between the two sites. The Lagrangian model, due to its model physics, generally calculates larger separation distances. For worst-case calculations necessary with environmental impact assessment studies, the use of a Lagrangian model is therefore to be preferred over that of a Gaussian model. The study and findings relate to the Austrian odour impact criteria.

  20. Mode-Division-Multiplexing of Multiple Bessel-Gaussian Beams Carrying Orbital-Angular-Momentum for Obstruction-Tolerant Free-Space Optical and Millimetre-Wave Communication Links

    PubMed Central

    Ahmed, Nisar; Zhao, Zhe; Li, Long; Huang, Hao; Lavery, Martin P. J.; Liao, Peicheng; Yan, Yan; Wang, Zhe; Xie, Guodong; Ren, Yongxiong; Almaiman, Ahmed; Willner, Asher J.; Ashrafi, Solyman; Molisch, Andreas F.; Tur, Moshe; Willner, Alan E.

    2016-01-01

    We experimentally investigate the potential of using ‘self-healing’ Bessel-Gaussian beams carrying orbital-angular-momentum to overcome limitations in obstructed free-space optical and 28-GHz millimetre-wave communication links. We multiplex and transmit two beams (l = +1 and +3) over 1.4 metres in both the optical and millimetre-wave domains. Each optical beam carried 50-Gbaud quadrature-phase-shift-keyed data, and each millimetre-wave beam carried 1-Gbaud 16-quadrature-amplitude-modulated data. In both types of links, opaque disks of different sizes are used to obstruct the beams at different transverse positions. We observe self-healing after the obstructions, and assess crosstalk and power penalty when data is transmitted. Moreover, we show that Bessel-Gaussian orbital-angular-momentum beams are more tolerant to obstructions than non-Bessel orbital-angular-momentum beams. For example, when obstructions that are 1 and 0.44 the size of the l = +1 beam, are placed at beam centre, optical and millimetre-wave Bessel-Gaussian beams show ~6 dB and ~8 dB reduction in crosstalk, respectively. PMID:26926068

  1. Generation of high-order Hermite-Gaussian modes in end-pumped solid-state lasers for square vortex array laser beam generation.

    PubMed

    Chu, Shu-Chun; Chen, Yun-Ting; Tsai, Ko-Fan; Otsuka, Kenju

    2012-03-26

    This study reports the first systematic approach to the excitation of all high-order Hermite-Gaussian modes (HGMs) in end-pumped solid-state lasers. This study uses a metal-wire-inserted laser resonator accompanied with the "off axis pumping" approach. This study presents numerical analysis of the excitation of HGMs in end-pumped solid-state lasers and experimentally generated HGM patterns. This study also experimentally demonstrates the generation of an square vortex array laser beams by passing specific high-order HGMs (HGn,n + 1 or HGn + 1,n modes) through a Dove prism-embedded unbalanced Mach-Zehnder interferometer [Optics Express 16, 19934-19949]. The resulting square vortex array laser beams with embedded vortexes aligned in a square array can be applied to multi-spot dark optical traps in the future.

  2. Regression models for the analysis of longitudinal Gaussian data from multiple sources.

    PubMed

    O'Brien, Liam M; Fitzmaurice, Garrett M

    2005-06-15

    We present a regression model for the joint analysis of longitudinal multiple source Gaussian data. Longitudinal multiple source data arise when repeated measurements are taken from two or more sources, and each source provides a measure of the same underlying variable and on the same scale. This type of data generally produces a relatively large number of observations per subject; thus estimation of an unstructured covariance matrix often may not be possible. We consider two methods by which parsimonious models for the covariance can be obtained for longitudinal multiple source data. The methods are illustrated with an example of multiple informant data arising from a longitudinal interventional trial in psychiatry.

  3. Bayesian non-parametric inference for stochastic epidemic models using Gaussian Processes

    PubMed Central

    Xu, Xiaoguang; Kypraios, Theodore; O'Neill, Philip D.

    2016-01-01

    This paper considers novel Bayesian non-parametric methods for stochastic epidemic models. Many standard modeling and data analysis methods use underlying assumptions (e.g. concerning the rate at which new cases of disease will occur) which are rarely challenged or tested in practice. To relax these assumptions, we develop a Bayesian non-parametric approach using Gaussian Processes, specifically to estimate the infection process. The methods are illustrated with both simulated and real data sets, the former illustrating that the methods can recover the true infection process quite well in practice, and the latter illustrating that the methods can be successfully applied in different settings. PMID:26993062

  4. Content-adaptive pentary steganography using the multivariate generalized Gaussian cover model

    NASA Astrophysics Data System (ADS)

    Sedighi, Vahid; Fridrich, Jessica; Cogranne, Rémi

    2015-03-01

    The vast majority of steganographic schemes for digital images stored in the raster format limit the amplitude of embedding changes to the smallest possible value. In this paper, we investigate the possibility to further improve the empirical security by allowing the embedding changes in highly textured areas to have a larger amplitude and thus embedding there a larger payload. Our approach is entirely model driven in the sense that the probabilities with which the cover pixels should be changed by a certain amount are derived from the cover model to minimize the power of an optimal statistical test. The embedding consists of two steps. First, the sender estimates the cover model parameters, the pixel variances, when modeling the pixels as a sequence of independent but not identically distributed generalized Gaussian random variables. Then, the embedding change probabilities for changing each pixel by 1 or 2, which can be transformed to costs for practical embedding using syndrome-trellis codes, are computed by solving a pair of non-linear algebraic equations. Using rich models and selection-channel-aware features, we compare the security of our scheme based on the generalized Gaussian model with pentary versions of two popular embedding algorithms: HILL and S-UNIWARD.

  5. Trispectrum estimation in various models of equilateral type non-Gaussianity

    NASA Astrophysics Data System (ADS)

    Izumi, Keisuke; Mizuno, Shuntaro; Koyama, Kazuya

    2012-01-01

    We calculate the shape correlations between trispectra in various equilateral non-Gaussian models, including Dirac-Born-Infeld inflation, ghost inflation and Lifshitz scalars, using the full trispectrum as well as the reduced trispectrum. We find that most theoretical models are distinguishable from the shapes of primordial trispectra except for several exceptions where it is difficult to discriminate between the models, such as single field Dirac-Born-Infeld inflation and a Lifshitz scalar model. We introduce an estimator for the amplitude of the trispectrum, gNLequil and relate it to model parameters in various models. Using constraints on gNLequil from WMAP5, we give constraints on the model parameters.

  6. Spherical Deconvolution of Multichannel Diffusion MRI Data with Non-Gaussian Noise Models and Spatial Regularization.

    PubMed

    Canales-Rodríguez, Erick J; Daducci, Alessandro; Sotiropoulos, Stamatios N; Caruyer, Emmanuel; Aja-Fernández, Santiago; Radua, Joaquim; Yurramendi Mendizabal, Jesús M; Iturria-Medina, Yasser; Melie-García, Lester; Alemán-Gómez, Yasser; Thiran, Jean-Philippe; Sarró, Salvador; Pomarol-Clotet, Edith; Salvador, Raymond

    2015-01-01

    Spherical deconvolution (SD) methods are widely used to estimate the intra-voxel white-matter fiber orientations from diffusion MRI data. However, while some of these methods assume a zero-mean Gaussian distribution for the underlying noise, its real distribution is known to be non-Gaussian and to depend on many factors such as the number of coils and the methodology used to combine multichannel MRI signals. Indeed, the two prevailing methods for multichannel signal combination lead to noise patterns better described by Rician and noncentral Chi distributions. Here we develop a Robust and Unbiased Model-BAsed Spherical Deconvolution (RUMBA-SD) technique, intended to deal with realistic MRI noise, based on a Richardson-Lucy (RL) algorithm adapted to Rician and noncentral Chi likelihood models. To quantify the benefits of using proper noise models, RUMBA-SD was compared with dRL-SD, a well-established method based on the RL algorithm for Gaussian noise. Another aim of the study was to quantify the impact of including a total variation (TV) spatial regularization term in the estimation framework. To do this, we developed TV spatially-regularized versions of both RUMBA-SD and dRL-SD algorithms. The evaluation was performed by comparing various quality metrics on 132 three-dimensional synthetic phantoms involving different inter-fiber angles and volume fractions, which were contaminated with noise mimicking patterns generated by data processing in multichannel scanners. The results demonstrate that the inclusion of proper likelihood models leads to an increased ability to resolve fiber crossings with smaller inter-fiber angles and to better detect non-dominant fibers. The inclusion of TV regularization dramatically improved the resolution power of both techniques. The above findings were also verified in human brain data.

  7. Measuring the Mass of Kepler-78b Using a Gaussian Process Model

    NASA Astrophysics Data System (ADS)

    Grunblatt, Samuel Kai; Howard, Andrew; Haywood, Raphaëlle

    2015-01-01

    Kepler-78b is a transiting planet that is 1.2 times the size of Earth and orbits a young K dwarf every 8 hours. Howard et al. (2013) and Pepe et al. (2013) independently reported the mass of Kepler-78b based on radial velocity measurements using the HIRES and HARPS-N spectrographs, respectively. In this study, a nonparametric model of the stellar activity observed in radial velocity measurements is made using Gaussian process regression, a novel technique in the field of radial velocity analysis, allowing the planetary Doppler signal to be modeled more accurately. By fitting the stellar activity with various Gaussian process regression models, we find a more precise measurement of the planet Doppler amplitude. We identify a superior Gaussian process model, and reanalyze both radial velocity datasets acquired by Howard et al. (2013) and Pepe et al. (2013) with this new technique. The Doppler amplitude of Kepler-78b is measured to be 1.92 +/- 0.25 m s-1, which corresponds to a mass of 1.93 +/- 0.27 ME, a 2.5-sigma improvement on the measurement of Howard et al (2013). This corresponds to a density of 6.1+1.9/-1.4 g cm-3, and an iron mass fraction of 0.32 +/- 0.26, assuming a two component rock-iron composition. This is consistent with an Earth-like composition, with uncertainties ranging from Moon-like to Mercury-like. Better understanding of the composition of Kepler-78b is an integral part of understanding rocky planet formation.

  8. Spherical Deconvolution of Multichannel Diffusion MRI Data with Non-Gaussian Noise Models and Spatial Regularization

    PubMed Central

    Canales-Rodríguez, Erick J.; Caruyer, Emmanuel; Aja-Fernández, Santiago; Radua, Joaquim; Yurramendi Mendizabal, Jesús M.; Iturria-Medina, Yasser; Melie-García, Lester; Alemán-Gómez, Yasser; Thiran, Jean-Philippe; Sarró, Salvador; Pomarol-Clotet, Edith; Salvador, Raymond

    2015-01-01

    Spherical deconvolution (SD) methods are widely used to estimate the intra-voxel white-matter fiber orientations from diffusion MRI data. However, while some of these methods assume a zero-mean Gaussian distribution for the underlying noise, its real distribution is known to be non-Gaussian and to depend on many factors such as the number of coils and the methodology used to combine multichannel MRI signals. Indeed, the two prevailing methods for multichannel signal combination lead to noise patterns better described by Rician and noncentral Chi distributions. Here we develop a Robust and Unbiased Model-BAsed Spherical Deconvolution (RUMBA-SD) technique, intended to deal with realistic MRI noise, based on a Richardson-Lucy (RL) algorithm adapted to Rician and noncentral Chi likelihood models. To quantify the benefits of using proper noise models, RUMBA-SD was compared with dRL-SD, a well-established method based on the RL algorithm for Gaussian noise. Another aim of the study was to quantify the impact of including a total variation (TV) spatial regularization term in the estimation framework. To do this, we developed TV spatially-regularized versions of both RUMBA-SD and dRL-SD algorithms. The evaluation was performed by comparing various quality metrics on 132 three-dimensional synthetic phantoms involving different inter-fiber angles and volume fractions, which were contaminated with noise mimicking patterns generated by data processing in multichannel scanners. The results demonstrate that the inclusion of proper likelihood models leads to an increased ability to resolve fiber crossings with smaller inter-fiber angles and to better detect non-dominant fibers. The inclusion of TV regularization dramatically improved the resolution power of both techniques. The above findings were also verified in human brain data. PMID:26470024

  9. Distinct metastable atmospheric regimes despite nearly Gaussian statistics: A paradigm model

    PubMed Central

    Majda, Andrew J.; Franzke, Christian L.; Fischer, Alexander; Crommelin, Daniel T.

    2006-01-01

    A controversial topic in the recent climate modeling literature is the fashion in which metastable low-frequency regimes in the atmosphere occur despite nearly Gaussian statistics for these planetary waves. Here a simple 57-mode paradigm model for such metastable atmospheric regime behavior is introduced and analyzed through hidden Markov model (HMM) analysis of the time series of suitable low-frequency planetary waves. The analysis of this paradigm model elucidates how statistically significant metastable regime transitions between blocked and zonal statistical states occur despite nearly Gaussian behavior in the associated probability distribution function and without a significant role for the low-order truncated nonlinear dynamics alone; turbulent backscatter onto the three-dimensional subspace of low-frequency modes is responsible for these effects. It also is demonstrated that suitable stochastic mode reduction strategies, which include both augmented cubic nonlinearity and multiplicative noise, are also capable of capturing the metastable low-frequency regime behavior through a single stochastic differential equation compared with the full turbulent chaotic 57-mode model. This feature is attractive for issues such as long-term weather predictability. Although there have been many applications of HMM in other sciences, this work presents a previously undescribed application of HMM analysis to atmospheric low-frequency variability and points the way for further applications including their use in extended range predictability. PMID:16714380

  10. On the Bayesian Treed Multivariate Gaussian Process with Linear Model of Coregionalization

    SciTech Connect

    Konomi, Bledar A.; Karagiannis, Georgios; Lin, Guang

    2015-02-01

    The Bayesian treed Gaussian process (BTGP) has gained popularity in recent years because it provides a straightforward mechanism for modeling non-stationary data and can alleviate computational demands by fitting models to less data. The extension of BTGP to the multivariate setting requires us to model the cross-covariance and to propose efficient algorithms that can deal with trans-dimensional MCMC moves. In this paper we extend the cross-covariance of the Bayesian treed multivariate Gaussian process (BTMGP) to that of linear model of Coregionalization (LMC) cross-covariances. Different strategies have been developed to improve the MCMC mixing and invert smaller matrices in the Bayesian inference. Moreover, we compare the proposed BTMGP with existing multiple BTGP and BTMGP in test cases and multiphase flow computer experiment in a full scale regenerator of a carbon capture unit. The use of the BTMGP with LMC cross-covariance helped to predict the computer experiments relatively better than existing competitors. The proposed model has a wide variety of applications, such as computer experiments and environmental data. In the case of computer experiments we also develop an adaptive sampling strategy for the BTMGP with LMC cross-covariance function.

  11. Spherical Gaussian mixture model and object tracking system for PTZ camera

    NASA Astrophysics Data System (ADS)

    Hwangbo, Seok; Lee, Chan-Su

    2015-05-01

    Recently, pan-tilt-zoom(PTZ) camera is widely used in extensive-area surveillance applications. A number of background modeling methods have been proposed within existing object detection and tracking systems. However, conventional background modeling methods for PTZ camera have difficulties in covering extensive field of view(FOV). This paper presents a novel object tracking system based on a spherical background model for PTZ camera. The proposed system has two components: The first one is the spherical Gaussian mixture model(S-GMM) that learns background for all the view angles in the PTZ camera. Also, Gaussian parameters in each pixel in the S-GMM are learned and updated. The second one is object tracking system with foreground detection using the S-GMM in real-time. The proposed system is suitable to cover wide FOV compared to a conventional background modeling system for PTZ camera, and is able to exactly track moving objects. We demonstrate the advantages of the proposed S-GMM for object tracking system using PTZ camera. Also, we expect to build a more advanced surveillance applications via the proposed system.

  12. Thermoelectricity in Disordered Organic Semiconductors under the Premise of the Gaussian Disorder Model and its Variants

    NASA Astrophysics Data System (ADS)

    Mendels, Dan; Tessler, Nir; Organic Materials; Devices Team

    2015-03-01

    Charge transport in disordered organic systems has been in recent decades mainly discerned from the perspective of a variety of phenomenological models prominent of which those stemming from the Gaussian Disorder Model. But while the use of these models has been prevalent, uncertainty regarding the extent of their validity remains due to the large number of free parameters they consist and their frequent deficiency to consistently account for large sets of experiments while keeping model input parameters and distributions unchanged. In the presented study, we have investigated using Monte Carlo simulations the thermoelectric properties of disordered organic semiconductors under the premise of the Gaussian Disorder Model and its variants. Doing so enabled the provision of additional dimensions for comparison between the aforementioned theoretical frameworks and real systems, beyond those based on extensively studied charge transport properties, and the provision of a frame-of-reference for rising interest in these systems for thermoelectric applications. To illustrate the potential existing in the implementation of combined transport and thermoelectric investigation, strategies will be discussed to experimentally deduce the DOS shape, infer whether a system's activation energy originates from its energetic disorder or a polaron activation energy (while deducing the given polaron activation energy), and discerning whether a system's energetic disorder is spatially correlated or accompanied by off-diagonal disorder.

  13. Coherent beam combination of fiber lasers with a strongly confined waveguide: numerical model.

    PubMed

    Tao, Rumao; Si, Lei; Ma, Yanxing; Zhou, Pu; Liu, Zejin

    2012-08-20

    Self-imaging properties of fiber lasers in a strongly confined waveguide (SCW) and their application in coherent beam combination (CBC) are studied theoretically. Analytical formulas are derived for the positions, amplitudes, and phases of the N images at the end of an SCW, which is important for quantitative analysis of waveguide CBC. The formulas are verified with experimental results and numerical simulation of a finite difference beam propagation method (BPM). The error of our analytical formulas is less than 6%, which can be reduced to less than 1.5% with Goos-Hahnchen penetration depth considered. Based on the theoretical model and BPM, we studied the combination of two laser beams based on an SCW. The effects of the waveguide refractive index and Gaussian beam waist are studied. We also simulated the CBC of nine and 16 fiber lasers, and a single beam without side lobes was achieved.

  14. Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM)

    NASA Astrophysics Data System (ADS)

    Xia, Kelin; Opron, Kristopher; Wei, Guo-Wei

    2015-11-01

    Gaussian network model (GNM) and anisotropic network model (ANM) are some of the most popular methods for the study of protein flexibility and related functions. In this work, we propose generalized GNM (gGNM) and ANM methods and show that the GNM Kirchhoff matrix can be built from the ideal low-pass filter, which is a special case of a wide class of correlation functions underpinning the linear scaling flexibility-rigidity index (FRI) method. Based on the mathematical structure of correlation functions, we propose a unified framework to construct generalized Kirchhoff matrices whose matrix inverse leads to gGNMs, whereas, the direct inverse of its diagonal elements gives rise to FRI method. With this connection, we further introduce two multiscale elastic network models, namely, multiscale GNM (mGNM) and multiscale ANM (mANM), which are able to incorporate different scales into the generalized Kirchhoff matrices or generalized Hessian matrices. We validate our new multiscale methods with extensive numerical experiments. We illustrate that gGNMs outperform the original GNM method in the B-factor prediction of a set of 364 proteins. We demonstrate that for a given correlation function, FRI and gGNM methods provide essentially identical B-factor predictions when the scale value in the correlation function is sufficiently large. More importantly, we reveal intrinsic multiscale behavior in protein structures. The proposed mGNM and mANM are able to capture this multiscale behavior and thus give rise to a significant improvement of more than 11% in B-factor predictions over the original GNM and ANM methods. We further demonstrate the benefits of our mGNM through the B-factor predictions of many proteins that fail the original GNM method. We show that the proposed mGNM can also be used to analyze protein domain separations. Finally, we showcase the ability of our mANM for the analysis of protein collective motions.

  15. Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM).

    PubMed

    Xia, Kelin; Opron, Kristopher; Wei, Guo-Wei

    2015-11-28

    Gaussian network model (GNM) and anisotropic network model (ANM) are some of the most popular methods for the study of protein flexibility and related functions. In this work, we propose generalized GNM (gGNM) and ANM methods and show that the GNM Kirchhoff matrix can be built from the ideal low-pass filter, which is a special case of a wide class of correlation functions underpinning the linear scaling flexibility-rigidity index (FRI) method. Based on the mathematical structure of correlation functions, we propose a unified framework to construct generalized Kirchhoff matrices whose matrix inverse leads to gGNMs, whereas, the direct inverse of its diagonal elements gives rise to FRI method. With this connection, we further introduce two multiscale elastic network models, namely, multiscale GNM (mGNM) and multiscale ANM (mANM), which are able to incorporate different scales into the generalized Kirchhoff matrices or generalized Hessian matrices. We validate our new multiscale methods with extensive numerical experiments. We illustrate that gGNMs outperform the original GNM method in the B-factor prediction of a set of 364 proteins. We demonstrate that for a given correlation function, FRI and gGNM methods provide essentially identical B-factor predictions when the scale value in the correlation function is sufficiently large. More importantly, we reveal intrinsic multiscale behavior in protein structures. The proposed mGNM and mANM are able to capture this multiscale behavior and thus give rise to a significant improvement of more than 11% in B-factor predictions over the original GNM and ANM methods. We further demonstrate the benefits of our mGNM through the B-factor predictions of many proteins that fail the original GNM method. We show that the proposed mGNM can also be used to analyze protein domain separations. Finally, we showcase the ability of our mANM for the analysis of protein collective motions.

  16. A novel multitarget model of radiation-induced cell killing based on the Gaussian distribution.

    PubMed

    Zhao, Lei; Mi, Dong; Sun, Yeqing

    2017-03-08

    The multitarget version of the traditional target theory based on the Poisson distribution is still used to describe the dose-survival curves of cells after ionizing radiation in radiobiology and radiotherapy. However, noting that the usual ionizing radiation damage is the result of two sequential stochastic processes, the probability distribution of the damage number per cell should follow a compound Poisson distribution, like e.g. Neyman's distribution of type A (N. A.). In consideration of that the Gaussian distribution can be considered as the approximation of the N. A. in the case of high flux, a multitarget model based on the Gaussian distribution is proposed to describe the cell inactivation effects in low linear energy transfer (LET) radiation with high dose-rate. Theoretical analysis and experimental data fitting indicate that the present theory is superior to the traditional multitarget model and similar to the Linear - Quadratic (LQ) model in describing the biological effects of low-LET radiation with high dose-rate, and the parameter ratio in the present model can be used as an alternative indicator to reflect the radiation damage and radiosensitivity of the cells.

  17. Gaussian-binary restricted Boltzmann machines for modeling natural image statistics.

    PubMed

    Melchior, Jan; Wang, Nan; Wiskott, Laurenz

    2017-01-01

    We present a theoretical analysis of Gaussian-binary restricted Boltzmann machines (GRBMs) from the perspective of density models. The key aspect of this analysis is to show that GRBMs can be formulated as a constrained mixture of Gaussians, which gives a much better insight into the model's capabilities and limitations. We further show that GRBMs are capable of learning meaningful features without using a regularization term and that the results are comparable to those of independent component analysis. This is illustrated for both a two-dimensional blind source separation task and for modeling natural image patches. Our findings exemplify that reported difficulties in training GRBMs are due to the failure of the training algorithm rather than the model itself. Based on our analysis we derive a better training setup and show empirically that it leads to faster and more robust training of GRBMs. Finally, we compare different sampling algorithms for training GRBMs and show that Contrastive Divergence performs better than training methods that use a persistent Markov chain.

  18. Multigrid Nonlocal Gaussian Mixture Model for Segmentation of Brain Tissues in Magnetic Resonance Images.

    PubMed

    Chen, Yunjie; Zhan, Tianming; Zhang, Ji; Wang, Hongyuan

    2016-01-01

    We propose a novel segmentation method based on regional and nonlocal information to overcome the impact of image intensity inhomogeneities and noise in human brain magnetic resonance images. With the consideration of the spatial distribution of different tissues in brain images, our method does not need preestimation or precorrection procedures for intensity inhomogeneities and noise. A nonlocal information based Gaussian mixture model (NGMM) is proposed to reduce the effect of noise. To reduce the effect of intensity inhomogeneity, the multigrid nonlocal Gaussian mixture model (MNGMM) is proposed to segment brain MR images in each nonoverlapping multigrid generated by using a new multigrid generation method. Therefore the proposed model can simultaneously overcome the impact of noise and intensity inhomogeneity and automatically classify 2D and 3D MR data into tissues of white matter, gray matter, and cerebral spinal fluid. To maintain the statistical reliability and spatial continuity of the segmentation, a fusion strategy is adopted to integrate the clustering results from different grid. The experiments on synthetic and clinical brain MR images demonstrate the superior performance of the proposed model comparing with several state-of-the-art algorithms.

  19. Encrypted data stream identification using randomness sparse representation and fuzzy Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Zhang, Hong; Hou, Rui; Yi, Lei; Meng, Juan; Pan, Zhisong; Zhou, Yuhuan

    2016-07-01

    The accurate identification of encrypted data stream helps to regulate illegal data, detect network attacks and protect users' information. In this paper, a novel encrypted data stream identification algorithm is introduced. The proposed method is based on randomness characteristics of encrypted data stream. We use a l1-norm regularized logistic regression to improve sparse representation of randomness features and Fuzzy Gaussian Mixture Model (FGMM) to improve identification accuracy. Experimental results demonstrate that the method can be adopted as an effective technique for encrypted data stream identification.

  20. Solving inverse problems with piecewise linear estimators: from Gaussian mixture models to structured sparsity.

    PubMed

    Yu, Guoshen; Sapiro, Guillermo; Mallat, Stéphane

    2012-05-01

    A general framework for solving image inverse problems with piecewise linear estimations is introduced in this paper. The approach is based on Gaussian mixture models, which are estimated via a maximum a posteriori expectation-maximization algorithm. A dual mathematical interpretation of the proposed framework with a structured sparse estimation is described, which shows that the resulting piecewise linear estimate stabilizes the estimation when compared with traditional sparse inverse problem techniques. We demonstrate that, in a number of image inverse problems, including interpolation, zooming, and deblurring of narrow kernels, the same simple and computationally efficient algorithm yields results in the same ballpark as that of the state of the art.

  1. Difference of two Gaussian Schell-model cross-spectral densities.

    PubMed

    Gori, Franco; Santarsiero, Massimo

    2014-05-01

    We present a number of results relating to the difference of two Gaussian Schell-model cross-spectral densities (CSDs). They allow us to specify conditions under which such a difference represents itself in a valid CSD. In particular, a sufficient condition is derived for the non-negative definiteness of the resulting CSD, for any admissible choice of the involved parameters, while a necessary and sufficient condition is obtained for the case of CSDs endowed with the property of being shape-invariant upon propagation.

  2. Option pricing formulas based on a non-Gaussian stock price model.

    PubMed

    Borland, Lisa

    2002-08-26

    Options are financial instruments that depend on the underlying stock. We explain their non-Gaussian fluctuations using the nonextensive thermodynamics parameter q. A generalized form of the Black-Scholes (BS) partial differential equation and some closed-form solutions are obtained. The standard BS equation (q=1) which is used by economists to calculate option prices requires multiple values of the stock volatility (known as the volatility smile). Using q=1.5 which well models the empirical distribution of returns, we get a good description of option prices using a single volatility.

  3. Ponderomotive and weakly relativistic self-focusing of Gaussian laser beam in plasma: Effect of light absorption

    NASA Astrophysics Data System (ADS)

    Patil, S. D.; Takale, M. V.

    2016-05-01

    This paper presents an influence of light absorption on self-focusing of laser beam propagation in plasma. The differential equation for beam-width parameter is obtained using the Wentzel-Kramers-Brillouin and paraxial approximations through parabolic equation approach. The nonlinearity in dielectric function is assumed to be aroused due to the combined effect of weakly relativistic and ponderomotive regime. To highlight the nature of propagation, behavior of beam-width parameter with dimensionless distance of propagation is presented graphically and discussed. The present work is helpful to understand issues related to the beam propagation in laser plasma interaction experiments where light absorption plays a vital role.

  4. Using Gaussian Processes to Model Noise in Eclipsing Binary Light Curves

    NASA Astrophysics Data System (ADS)

    Prsa, Andrej; Hambleton, Kelly M.

    2017-01-01

    The most precise data we have at hand arguably comes from NASA's Kepler mission, for which there is no good flux calibration available since it was designed to measure relative flux changes down to ~20ppm level. Instrumental artifacts thus abound in the data, and they vary with the module, location on the CCD, target brightness, electronic cross-talk, etc. In addition, Kepler's near-uninterrupted mode of observation reveals astrophysical signals and transient phenomena (i.e. spots, flares, protuberances, pulsations, magnetic field features, etc) that are not accounted for in the models. These "nuisance" signals, along with instrumental artifacts, are considered noise when modeling light curves; this noise is highly correlated and it cannot be considered poissonian or gaussian. Detrending non-white noise from light curve data has been an ongoing challenge in modeling eclipsing binary star and exoplanet transit light curves. Here we present an approach using Gaussian Processes (GP) to model noise as part of the overall likelihood function. The likelihood function consists of the eclipsing binary light curve generator PHOEBE, correlated noise model using GP, and a poissonian (shot) noise attributed to the actual stochastic component of the entire noise model. We consider GP parameters and poissonian noise amplitude as free parameters that are being sampled within the likelihood function, so the end result is the posterior probability not only for eclipsing binary model parameters, but for the noise parameters as well. We show that the posteriors of principal parameters are significantly more robust when noise is modeled rigorously compared to modeling detrended data with an eclipsing binary model alone. This work has been funded by NSF grant #1517460.

  5. Gaussian-binary restricted Boltzmann machines for modeling natural image statistics

    PubMed Central

    Wang, Nan; Wiskott, Laurenz

    2017-01-01

    We present a theoretical analysis of Gaussian-binary restricted Boltzmann machines (GRBMs) from the perspective of density models. The key aspect of this analysis is to show that GRBMs can be formulated as a constrained mixture of Gaussians, which gives a much better insight into the model’s capabilities and limitations. We further show that GRBMs are capable of learning meaningful features without using a regularization term and that the results are comparable to those of independent component analysis. This is illustrated for both a two-dimensional blind source separation task and for modeling natural image patches. Our findings exemplify that reported difficulties in training GRBMs are due to the failure of the training algorithm rather than the model itself. Based on our analysis we derive a better training setup and show empirically that it leads to faster and more robust training of GRBMs. Finally, we compare different sampling algorithms for training GRBMs and show that Contrastive Divergence performs better than training methods that use a persistent Markov chain. PMID:28152552

  6. Assessing clustering strategies for Gaussian mixture filtering a subsurface contaminant model

    NASA Astrophysics Data System (ADS)

    Liu, B.; Gharamti, M. E.; Hoteit, I.

    2016-04-01

    An ensemble-based Gaussian mixture (GM) filtering framework is studied in this paper in term of its dependence on the choice of the clustering method to construct the GM. In this approach, a number of particles sampled from the posterior distribution are first integrated forward with the dynamical model for forecasting. A GM representation of the forecast distribution is then constructed from the forecast particles. Once an observation becomes available, the forecast GM is updated according to Bayes' rule. This leads to (i) a Kalman filter-like update of the particles, and (ii) a Particle filter-like update of their weights, generalizing the ensemble Kalman filter update to non-Gaussian distributions. We focus on investigating the impact of the clustering strategy on the behavior of the filter. Three different clustering methods for constructing the prior GM are considered: (i) a standard kernel density estimation, (ii) clustering with a specified mixture component size, and (iii) adaptive clustering (with a variable GM size). Numerical experiments are performed using a two-dimensional reactive contaminant transport model in which the contaminant concentration and the heterogenous hydraulic conductivity fields are estimated within a confined aquifer using solute concentration data. The experimental results suggest that the performance of the GM filter is sensitive to the choice of the GM model. In particular, increasing the size of the GM does not necessarily result in improved performances. In this respect, the best results are obtained with the proposed adaptive clustering scheme.

  7. Geometrical measures of non-Gaussianity generated from single field inflationary models

    NASA Astrophysics Data System (ADS)

    Junaid, M.; Pogosyan, D.

    2015-08-01

    We calculate the third-order moments of scalar curvature perturbations in configuration space for different inflationary models. We develop a robust numerical technique to compute the bispectrum for different models that have some features in the inflationary potential. From the bispectrum we evaluate moments analytically in the slow-roll regime while we devise a numerical mechanism to calculate these moments for non-slow-roll single-field inflationary models with a standard kinetic term that are minimally coupled to gravity. With the help of these third-order moments one can directly predict many non-Gaussian and geometrical measures of cosmic microwave background distributions in the configuration space. Thus, we devise a framework to calculate different third-order moments and geometrical measures, e.g. Minkowski functionals or the skeleton statistic, generated by different single-field models of inflation.

  8. Using convex quadratic programming to model random media with Gaussian random fields

    SciTech Connect

    Quintanilla, John A.; Jones, W. Max

    2007-04-15

    Excursion sets of Gaussian random fields (GRFs) have been frequently used in the literature to model two-phase random media with measurable phase autocorrelation functions. The goal of successful modeling is finding the optimal field autocorrelation function that best approximates the prescribed phase autocorrelation function. In this paper, we present a technique which uses convex quadratic programming to find the best admissible field autocorrelation function under a prescribed discretization. Unlike previous methods, this technique efficiently optimizes over all admissible field autocorrelation functions, instead of optimizing only over a predetermined parametrized family. The results from using this technique indicate that the GRF model is significantly more versatile than observed in previous studies. An application to modeling a base-catalyzed tetraethoxysilane aerogel system given small-angle neutron scattering data is also presented.

  9. Exploration of lagged relationships between mastitis and milk yield in dairycows using a Bayesian structural equation Gaussian-threshold model

    PubMed Central

    Wu, Xiao-Lin; Heringstad, Bjørg; Gianola, Daniel

    2008-01-01

    A Gaussian-threshold model is described under the general framework of structural equation models for inferring simultaneous and recursive relationships between binary and Gaussian characters, and estimating genetic parameters. Relationships between clinical mastitis (CM) and test-day milk yield (MY) in first-lactation Norwegian Red cows were examined using a recursive Gaussian-threshold model. For comparison, the data were also analyzed using a standard Gaussian-threshold, a multivariate linear model, and a recursive multivariate linear model. The first 180 days of lactation were arbitrarily divided into three periods of equal length, in order to investigate how these relationships evolve in the course of lactation. The recursive model showed negative within-period effects from (liability to) CM to test-day MY in all three lactation periods, and positive between-period effects from test-day MY to (liability to) CM in the following period. Estimates of recursive effects and of genetic parameters were time-dependent. The results suggested unfavorable effects of production on liability to mastitis, and dynamic relationships between mastitis and test-dayMYin the course of lactation. Fitting recursive effects had little influence on the estimation of genetic parameters. However, some differences were found in the estimates of heritability, genetic, and residual correlations, using different types of models (Gaussian-threshold vs. multivariate linear). PMID:18558070

  10. Gaussian mixture model-based gradient field reconstruction for infrared image detail enhancement and denoising

    NASA Astrophysics Data System (ADS)

    Zhao, Fan; Zhao, Jian; Zhao, Wenda; Qu, Feng

    2016-05-01

    Infrared images are characterized by low signal-to-noise ratio and low contrast. Therefore, the edge details are easily immerged in the background and noise, making it much difficult to achieve infrared image edge detail enhancement and denoising. This article proposes a novel method of Gaussian mixture model-based gradient field reconstruction, which enhances image edge details while suppressing noise. First, by analyzing the gradient histogram of noisy infrared image, Gaussian mixture model is adopted to simulate the distribution of the gradient histogram, and divides the image information into three parts corresponding to faint details, noise and the edges of clear targets, respectively. Then, the piecewise function is constructed based on the characteristics of the image to increase gradients of faint details and suppress gradients of noise. Finally, anisotropic diffusion constraint is added while visualizing enhanced image from the transformed gradient field to further suppress noise. The experimental results show that the method possesses unique advantage of effectively enhancing infrared image edge details and suppressing noise as well, compared with the existing methods. In addition, it can be used to effectively enhance other types of images such as the visible and medical images.

  11. Gaussian process model for extrapolation of scattering observables for complex molecules: From benzene to benzonitrile

    SciTech Connect

    Cui, Jie; Krems, Roman V.; Li, Zhiying

    2015-10-21

    We consider a problem of extrapolating the collision properties of a large polyatomic molecule A–H to make predictions of the dynamical properties for another molecule related to A–H by the substitution of the H atom with a small molecular group X, without explicitly computing the potential energy surface for A–X. We assume that the effect of the −H →−X substitution is embodied in a multidimensional function with unknown parameters characterizing the change of the potential energy surface. We propose to apply the Gaussian Process model to determine the dependence of the dynamical observables on the unknown parameters. This can be used to produce an interval of the observable values which corresponds to physical variations of the potential parameters. We show that the Gaussian Process model combined with classical trajectory calculations can be used to obtain the dependence of the cross sections for collisions of C{sub 6}H{sub 5}CN with He on the unknown parameters describing the interaction of the He atom with the CN fragment of the molecule. The unknown parameters are then varied within physically reasonable ranges to produce a prediction uncertainty of the cross sections. The results are normalized to the cross sections for He — C{sub 6}H{sub 6} collisions obtained from quantum scattering calculations in order to provide a prediction interval of the thermally averaged cross sections for collisions of C{sub 6}H{sub 5}CN with He.

  12. Childhood malnutrition in Egypt using geoadditive Gaussian and latent variable models.

    PubMed

    Khatab, Khaled

    2010-04-01

    Major progress has been made over the last 30 years in reducing the prevalence of malnutrition amongst children less than 5 years of age in developing countries. However, approximately 27% of children under the age of 5 in these countries are still malnourished. This work focuses on the childhood malnutrition in one of the biggest developing countries, Egypt. This study examined the association between bio-demographic and socioeconomic determinants and the malnutrition problem in children less than 5 years of age using the 2003 Demographic and Health survey data for Egypt. In the first step, we use separate geoadditive Gaussian models with the continuous response variables stunting (height-for-age), underweight (weight-for-age), and wasting (weight-for-height) as indicators of nutritional status in our case study. In a second step, based on the results of the first step, we apply the geoadditive Gaussian latent variable model for continuous indicators in which the 3 measurements of the malnutrition status of children are assumed as indicators for the latent variable "nutritional status".

  13. Gaussian process model for extrapolation of scattering observables for complex molecules: From benzene to benzonitrile.

    PubMed

    Cui, Jie; Li, Zhiying; Krems, Roman V

    2015-10-21

    We consider a problem of extrapolating the collision properties of a large polyatomic molecule A-H to make predictions of the dynamical properties for another molecule related to A-H by the substitution of the H atom with a small molecular group X, without explicitly computing the potential energy surface for A-X. We assume that the effect of the -H →-X substitution is embodied in a multidimensional function with unknown parameters characterizing the change of the potential energy surface. We propose to apply the Gaussian Process model to determine the dependence of the dynamical observables on the unknown parameters. This can be used to produce an interval of the observable values which corresponds to physical variations of the potential parameters. We show that the Gaussian Process model combined with classical trajectory calculations can be used to obtain the dependence of the cross sections for collisions of C6H5CN with He on the unknown parameters describing the interaction of the He atom with the CN fragment of the molecule. The unknown parameters are then varied within physically reasonable ranges to produce a prediction uncertainty of the cross sections. The results are normalized to the cross sections for He - C6H6 collisions obtained from quantum scattering calculations in order to provide a prediction interval of the thermally averaged cross sections for collisions of C6H5CN with He.

  14. Segmentation of Concealed Objects in Passive Millimeter-Wave Images Based on the Gaussian Mixture Model

    NASA Astrophysics Data System (ADS)

    Yu, Wangyang; Chen, Xiangguang; Wu, Lei

    2015-04-01

    Passive millimeter wave (PMMW) imaging has become one of the most effective means to detect the objects concealed under clothing. Due to the limitations of the available hardware and the inherent physical properties of PMMW imaging systems, images often exhibit poor contrast and low signal-to-noise ratios. Thus, it is difficult to achieve ideal results by using a general segmentation algorithm. In this paper, an advanced Gaussian Mixture Model (GMM) algorithm for the segmentation of concealed objects in PMMW images is presented. Our work is concerned with the fact that the GMM is a parametric statistical model, which is often used to characterize the statistical behavior of images. Our approach is three-fold: First, we remove the noise from the image using both a notch reject filter and a total variation filter. Next, we use an adaptive parameter initialization GMM algorithm (APIGMM) for simulating the histogram of images. The APIGMM provides an initial number of Gaussian components and start with more appropriate parameter. Bayesian decision is employed to separate the pixels of concealed objects from other areas. At last, the confidence interval (CI) method, alongside local gradient information, is used to extract the concealed objects. The proposed hybrid segmentation approach detects the concealed objects more accurately, even compared to two other state-of-the-art segmentation methods.

  15. A Method for Determining the Nominal Occular Hazard Zone for Gaussian Beam Laser Rangers with a Firmware Controlled Variable Focal Length

    NASA Technical Reports Server (NTRS)

    Picco, C. E.; Shavers, M. R.; Victor, J. M.; Duron, J. L.; Bowers, W. h.; Gillis, D. B.; VanBaalen, M.

    2009-01-01

    LIDAR systems that maintain a constant beam spot size on a retroreflector in order to increase the accuracy of bearing and ranging data must use a software controlled variable position lens. These systems periodically update the estimated range and set the position of the focusing lens accordingly. In order to precisely calculate the r NOHD for such a system, the software method for setting the variable position lens and gaussian laser propagation can be used to calculate the irradiance at any point given the range estimation. NASA s Space Shuttle LIDAR, called the Trajectory Control Sensor (TCS), uses this configuration. Analytical tools were developed using Excel and VBA to determine the radiant energy to the International Space Station (ISS) crewmembers eyes while viewing the shuttle on approach and departure. Various viewing scenarios are considered including the use of through-the-lens imaging optics and the window transmissivity at the TCS wavelength. The methodology incorporates the TCS system control logic, gaussian laser propagation, potential failure mode end states, and guidance from American National Standard for the Safe Use of Lasers (ANSI Z136.1-2007). This approach can be adapted for laser safety analyses of similar LIDAR systems.

  16. Numerical investigation on the generation of high-order Laguerre-Gaussian beams in end-pumped solid-state lasers by introducing loss control.

    PubMed

    Hu, Ajian; Lei, Jian; Chen, Peifeng; Wang, Ying; Li, Shumo

    2014-11-20

    This paper reports a robust and systematic approach to generate high-order scalar Laguerre-Gaussian (LGp,l) beams in end-pumped solid-state lasers by introducing loss control. Based on the spatial distributions of Laguerre-Gaussian modes and the theory of transverse mode selection, the "loss control" is implemented by an amplitude mask in the resonator. This proposed mechanism can be divided into three categories: radial loss, azimuthal loss, and the combination of radial and azimuthal loss, which correspond to excite radial high-order modes (LGp,0), azimuthal high-order modes (LG0,l), and regular high-order modes (LGp,l), respectively. By controlling the locations and thicknesses of opaque rings and lines on the mask, all kinds of LGp,l modes can be obtained. With the application of mode purity, all the generated modes possess high mode purities greater than 93% in simulation.

  17. Detecting variability in massive astronomical time series data - I. Application of an infinite Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Shin, Min-Su; Sekora, Michael; Byun, Yong-Ik

    2009-12-01

    We present a new framework to detect various types of variable objects within massive astronomical time series data. Assuming that the dominant population of objects is non-variable, we find outliers from this population by using a non-parametric Bayesian clustering algorithm based on an infinite Gaussian mixture model (GMM) and the Dirichlet process. The algorithm extracts information from a given data set, which is described by six variability indices. The GMM uses those variability indices to recover clusters that are described by six-dimensional multivariate Gaussian distributions, allowing our approach to consider the sampling pattern of time series data, systematic biases, the number of data points for each light curve and photometric quality. Using the Northern Sky Variability Survey data, we test our approach and prove that the infinite GMM is useful at detecting variable objects, while providing statistical inference estimation that suppresses false detection. The proposed approach will be effective in the exploration of future surveys such as Gaia, Panoramic Survey Telescope and Rapid Response System (Pan-STARRS) and Large Synoptic Survey Telescope (LSST), which will produce massive time series data.

  18. Thermal time constant: optimising the skin temperature predictive modelling in lower limb prostheses using Gaussian processes

    PubMed Central

    Buis, Arjan

    2016-01-01

    Elevated skin temperature at the body/device interface of lower-limb prostheses is one of the major factors that affect tissue health. The heat dissipation in prosthetic sockets is greatly influenced by the thermal conductive properties of the hard socket and liner material employed. However, monitoring of the interface temperature at skin level in lower-limb prosthesis is notoriously complicated. This is due to the flexible nature of the interface liners used which requires consistent positioning of sensors during donning and doffing. Predicting the residual limb temperature by monitoring the temperature between socket and liner rather than skin and liner could be an important step in alleviating complaints on increased temperature and perspiration in prosthetic sockets. To predict the residual limb temperature, a machine learning algorithm – Gaussian processes is employed, which utilizes the thermal time constant values of commonly used socket and liner materials. This Letter highlights the relevance of thermal time constant of prosthetic materials in Gaussian processes technique which would be useful in addressing the challenge of non-invasively monitoring the residual limb skin temperature. With the introduction of thermal time constant, the model can be optimised and generalised for a given prosthetic setup, thereby making the predictions more reliable. PMID:27695626

  19. INTERACTION OF LASER RADIATION WITH MATTER. LASER PLASMA: Excitation of convective motions and surface hydrodynamic soliton-type waves in liquid crystals by a Gaussian laser beam

    NASA Astrophysics Data System (ADS)

    Akopyan, R. S.; Alaverdyan, R. B.; Arakelyan, A. G.; Nersisyan, S. Ts; Chilingaryan, Yu S.

    2004-03-01

    The possibility of exciting convective motions with a toroidal symmetry in a disordered liquid-crystal cell with an open surface, which is locally heated by a Gaussian laser beam, is demonstrated experimentally. A perturbation of the free surface of the liquid crystal and a convective hydrodynamic motion are determined by temperature gradients. It is shown that a radial distribution of the director of a nematic liquid crystal appears in the convection region. Under certain experimental conditions, soliton-type hydrodynamic orientation waves are observed at the free surface of a nematic liquid crystal. It is found experimentally that the velocity of these waves is determined solely by the liquid-crystal parameters and is independent of the incident laser-radiation power.

  20. Towards an accurate model of redshift-space distortions: a bivariate Gaussian description for the galaxy pairwise velocity distributions

    NASA Astrophysics Data System (ADS)

    Bianchi, Davide; Chiesa, Matteo; Guzzo, Luigi

    2016-10-01

    As a step towards a more accurate modelling of redshift-space distortions (RSD) in galaxy surveys, we develop a general description of the probability distribution function of galaxy pairwise velocities within the framework of the so-called streaming model. For a given galaxy separation , such function can be described as a superposition of virtually infinite local distributions. We characterize these in terms of their moments and then consider the specific case in which they are Gaussian functions, each with its own mean μ and variance σ2. Based on physical considerations, we make the further crucial assumption that these two parameters are in turn distributed according to a bivariate Gaussian, with its own mean and covariance matrix. Tests using numerical simulations explicitly show that with this compact description one can correctly model redshift-space distorsions on all scales, fully capturing the overall linear and nonlinear dynamics of the galaxy flow at different separations. In particular, we naturally obtain Gaussian/exponential, skewed/unskewed distribution functions, depending on separation as observed in simulations and data. Also, the recently proposed single-Gaussian description of redshift-space distortions is included in this model as a limiting case, when the bivariate Gaussian is collapsed to a two-dimensional Dirac delta function. More work is needed, but these results indicate a very promising path to make definitive progress in our program to improve RSD estimators.

  1. Extinction efficiency of "elastic-sheet" beams by a cylindrical (viscous) fluid inclusion embedded in an elastic medium and mode conversion—Examples of nonparaxial Gaussian and Airy beams

    NASA Astrophysics Data System (ADS)

    Mitri, F. G.

    2016-10-01

    Stemming from the law of the conservation of energy in an elastic medium, this work extends the scope of the previous analysis for a scatterer immersed in a nonviscous liquid [F. G. Mitri, Ultrasonics 62, 20-26 (2015)] to the case of a (viscous) fluid circular cylinder cross-section encased in a homogeneous, isotropic, elastic matrix. Analytical expressions for the absorption, scattering, and extinction efficiencies (or cross-sections) are derived for "elastic-sheets" (i.e., finite beams in 2D propagating in elastic media) of arbitrary wavefront, in contrast to the ideal case of plane waves of infinite extent. The mathematical expressions are formulated in generalized partial-wave series expansions in cylindrical coordinates involving the beam-shape coefficients of finite elastic-sheet beams with arbitrary wavefront, and the scattering coefficients of the fluid cylinder encased in the elastic matrix. The analysis shows that in elastodynamic scattering, both the scattered L-wave as well as the scattered T-wave contribute to the time-averaged scattered efficiency (or power). However, the extinction efficiency only depends on the scattering coefficients characterizing the same type (L or T) as the incident wave. Numerical computations for the (non-dimensional energy) efficiency factors such as the absorption, scattering, and extinction efficiencies of a circular cylindrical viscous fluid cavity embedded in an elastic aluminum matrix are performed for nonparaxial focused Gaussian and Airy elastic-sheet beams with arbitrary longitudinal and transverse normally-polarized (shear) wave incidences in the Rayleigh and resonance regimes. A series of elastic resonances are manifested in the plots of the efficiencies as the non-dimensional size parameters for the L- and T-waves are varied. As the beam waist for the nonparaxial Gaussian beam increases, the plane wave result is recovered, while for a tightly focused wavefront, some of the elastic resonances can be suppressed

  2. A Gaussian process model for data association and a semidefinite programming solution.

    PubMed

    Lázaro-Gredilla, Miguel; Van Vaerenbergh, Steven

    2014-11-01

    In this paper, we propose a Bayesian model for the data association problem, in which trajectory smoothness is enforced through the use of Gaussian process priors. This model allows to score candidate associations using the evidence framework, thus casting the data association problem into an optimization problem. Under some additional mild assumptions, this optimization problem is shown to be equivalent to a constrained Max K-section problem. Furthermore, for K=2, a MaxCut formulation is obtained, to which an approximate solution can be efficiently found using an SDP relaxation. Solving this MaxCut problem is equivalent to finding the optimal association out of the combinatorially many possibilities. The obtained clustering depends only on two hyperparameters, which can also be selected by maximum evidence.

  3. Sampling schemes and parameter estimation for nonlinear Bernoulli-Gaussian sparse models

    NASA Astrophysics Data System (ADS)

    Boudineau, Mégane; Carfantan, Hervé; Bourguignon, Sébastien; Bazot, Michael

    2016-06-01

    We address the sparse approximation problem in the case where the data are approximated by the linear combination of a small number of elementary signals, each of these signals depending non-linearly on additional parameters. Sparsity is explicitly expressed through a Bernoulli-Gaussian hierarchical model in a Bayesian framework. Posterior mean estimates are computed using Markov Chain Monte-Carlo algorithms. We generalize the partially marginalized Gibbs sampler proposed in the linear case in [1], and build an hybrid Hastings-within-Gibbs algorithm in order to account for the nonlinear parameters. All model parameters are then estimated in an unsupervised procedure. The resulting method is evaluated on a sparse spectral analysis problem. It is shown to converge more efficiently than the classical joint estimation procedure, with only a slight increase of the computational cost per iteration, consequently reducing the global cost of the estimation procedure.

  4. Prediction of Filamentous Sludge Bulking using a State-based Gaussian Processes Regression Model

    NASA Astrophysics Data System (ADS)

    Liu, Yiqi; Guo, Jianhua; Wang, Qilin; Huang, Daoping

    2016-08-01

    Activated sludge process has been widely adopted to remove pollutants in wastewater treatment plants (WWTPs). However, stable operation of activated sludge process is often compromised by the occurrence of filamentous bulking. The aim of this study is to build a proper model for timely diagnosis and prediction of filamentous sludge bulking in an activated sludge process. This study developed a state-based Gaussian Process Regression (GPR) model to monitor the filamentous sludge bulking related parameter, sludge volume index (SVI), in such a way that the evolution of SVI can be predicted over multi-step ahead. This methodology was validated with SVI data collected from one full-scale WWTP. Online diagnosis and prediction of filamentous bulking sludge with real-time SVI prediction was tested through a simulation study. The results showed that the proposed methodology was capable of predicting future SVIs with good accuracy, thus providing sufficient time for predicting and controlling filamentous sludge bulking.

  5. Prediction of Filamentous Sludge Bulking using a State-based Gaussian Processes Regression Model

    PubMed Central

    Liu, Yiqi; Guo, Jianhua; Wang, Qilin; Huang, Daoping

    2016-01-01

    Activated sludge process has been widely adopted to remove pollutants in wastewater treatment plants (WWTPs). However, stable operation of activated sludge process is often compromised by the occurrence of filamentous bulking. The aim of this study is to build a proper model for timely diagnosis and prediction of filamentous sludge bulking in an activated sludge process. This study developed a state-based Gaussian Process Regression (GPR) model to monitor the filamentous sludge bulking related parameter, sludge volume index (SVI), in such a way that the evolution of SVI can be predicted over multi-step ahead. This methodology was validated with SVI data collected from one full-scale WWTP. Online diagnosis and prediction of filamentous bulking sludge with real-time SVI prediction was tested through a simulation study. The results showed that the proposed methodology was capable of predicting future SVIs with good accuracy, thus providing sufficient time for predicting and controlling filamentous sludge bulking. PMID:27498888

  6. Bayesian estimation of airborne fugitive emissions using a Gaussian plume model

    NASA Astrophysics Data System (ADS)

    Hosseini, Bamdad; Stockie, John M.

    2016-09-01

    A new method is proposed for estimating the rate of fugitive emissions of particulate matter from multiple time-dependent sources via measurements of deposition and concentration. We cast this source inversion problem within the Bayesian framework, and use a forward model based on a Gaussian plume solution. We present three alternate models for constructing the prior distribution on the emission rates as functions of time. Next, we present an industrial case study in which our framework is applied to estimate the rate of fugitive emissions of lead particulates from a smelter in Trail, British Columbia, Canada. The Bayesian framework not only provides an approximate solution to the inverse problem, but also quantifies the uncertainty in the solution. Using this information we perform an uncertainty propagation study in order to assess the impact of the estimated sources on the area surrounding the industrial site.

  7. Gaussian diffusion sphere model to predict deposition velocities under the combined effects of electrophoresis and thermophoresis

    NASA Astrophysics Data System (ADS)

    Kang, Soojin; Yook, Se-Jin; Lee, Kwan-Soo

    2014-03-01

    The Gaussian diffusion sphere model (GDSM) is proposed to predict the average deposition velocity of particles onto a flat plate exposed to parallel airflow after considering the combined effects of electrophoresis and thermophoresis. This model can account for convection, Brownian diffusion, gravitational settling, thermophoresis, and electrophoresis, and it provides fast calculation times and accurate predictions. Using the GDSM, the effects of the deposition surface size on the deposition velocity are analyzed. When the gravitational effect is dominant for a face-up surface or the attractive electrophoresis effect is dominant, the deposition velocity is estimated to be independent of the deposition surface size. Deposition under the influence of thermophoresis depends on the deposition surface size due to the formation of a thermal boundary layer. Deposition velocities for a 450-mm-long surface are studied under a temperature difference of 40 K and for electric field strengths ranging from 0 to 1000 V/cm.

  8. Phylogenetic Gaussian process model for the inference of functionally important regions in protein tertiary structures.

    PubMed

    Huang, Yi-Fei; Golding, G Brian

    2014-01-01

    A critical question in biology is the identification of functionally important amino acid sites in proteins. Because functionally important sites are under stronger purifying selection, site-specific substitution rates tend to be lower than usual at these sites. A large number of phylogenetic models have been developed to estimate site-specific substitution rates in proteins and the extraordinarily low substitution rates have been used as evidence of function. Most of the existing tools, e.g. Rate4Site, assume that site-specific substitution rates are independent across sites. However, site-specific substitution rates may be strongly correlated in the protein tertiary structure, since functionally important sites tend to be clustered together to form functional patches. We have developed a new model, GP4Rate, which incorporates the Gaussian process model with the standard phylogenetic model to identify slowly evolved regions in protein tertiary structures. GP4Rate uses the Gaussian process to define a nonparametric prior distribution of site-specific substitution rates, which naturally captures the spatial correlation of substitution rates. Simulations suggest that GP4Rate can potentially estimate site-specific substitution rates with a much higher accuracy than Rate4Site and tends to report slowly evolved regions rather than individual sites. In addition, GP4Rate can estimate the strength of the spatial correlation of substitution rates from the data. By applying GP4Rate to a set of mammalian B7-1 genes, we found a highly conserved region which coincides with experimental evidence. GP4Rate may be a useful tool for the in silico prediction of functionally important regions in the proteins with known structures.

  9. Surgical workflow analysis with Gaussian mixture multivariate autoregressive (GMMAR) models: a simulation study.

    PubMed

    Loukas, Constantinos; Georgiou, Evangelos

    2013-01-01

    There is currently great interest in analyzing the workflow of minimally invasive operations performed in a physical or simulation setting, with the aim of extracting important information that can be used for skills improvement, optimization of intraoperative processes, and comparison of different interventional strategies. The first step in achieving this goal is to segment the operation into its key interventional phases, which is currently approached by modeling a multivariate signal that describes the temporal usage of a predefined set of tools. Although this technique has shown promising results, it is challenged by the manual extraction of the tool usage sequence and the inability to simultaneously evaluate the surgeon's skills. In this paper we describe an alternative methodology for surgical phase segmentation and performance analysis based on Gaussian mixture multivariate autoregressive (GMMAR) models of the hand kinematics. Unlike previous work in this area, our technique employs signals from orientation sensors, attached to the endoscopic instruments of a virtual reality simulator, without considering which tools are employed at each time-step of the operation. First, based on pre-segmented hand motion signals, a training set of regression coefficients is created for each surgical phase using multivariate autoregressive (MAR) models. Then, a signal from a new operation is processed with GMMAR, wherein each phase is modeled by a Gaussian component of regression coefficients. These coefficients are compared to those of the training set. The operation is segmented according to the prior probabilities of the surgical phases estimated via GMMAR. The method also allows for the study of motor behavior and hand motion synchronization demonstrated in each phase, a quality that can be incorporated into modern laparoscopic simulators for skills assessment.

  10. Flat-top beam for laser-stimulated pain

    NASA Astrophysics Data System (ADS)

    McCaughey, Ryan; Nadeau, Valerie; Dickinson, Mark

    2005-04-01

    One of the main problems during laser stimulation in human pain research is the risk of tissue damage caused by excessive heating of the skin. This risk has been reduced by using a laser beam with a flattop (or superGaussian) intensity profile, instead of the conventional Gaussian beam. A finite difference approximation to the heat conduction equation has been applied to model the temperature distribution in skin as a result of irradiation by flattop and Gaussian profile CO2 laser beams. The model predicts that a 15 mm diameter, 15 W, 100 ms CO2 laser pulse with an order 6 superGaussian profile produces a maximum temperature 6 oC less than a Gaussian beam with the same energy density. A superGaussian profile was created by passing a Gaussian beam through a pair of zinc selenide aspheric lenses which refract the more intense central region of the beam towards the less intense periphery. The profiles of the lenses were determined by geometrical optics. In human pain trials the superGaussian beam required more power than the Gaussian beam to reach sensory and pain thresholds.

  11. A Joint Gaussian Process Model for Active Visual Recognition with Expertise Estimation in Crowdsourcing

    PubMed Central

    Long, Chengjiang; Hua, Gang; Kapoor, Ashish

    2015-01-01

    We present a noise resilient probabilistic model for active learning of a Gaussian process classifier from crowds, i.e., a set of noisy labelers. It explicitly models both the overall label noise and the expertise level of each individual labeler with two levels of flip models. Expectation propagation is adopted for efficient approximate Bayesian inference of our probabilistic model for classification, based on which, a generalized EM algorithm is derived to estimate both the global label noise and the expertise of each individual labeler. The probabilistic nature of our model immediately allows the adoption of the prediction entropy for active selection of data samples to be labeled, and active selection of high quality labelers based on their estimated expertise to label the data. We apply the proposed model for four visual recognition tasks, i.e., object category recognition, multi-modal activity recognition, gender recognition, and fine-grained classification, on four datasets with real crowd-sourced labels from the Amazon Mechanical Turk. The experiments clearly demonstrate the efficacy of the proposed model. In addition, we extend the proposed model with the Predictive Active Set Selection Method to speed up the active learning system, whose efficacy is verified by conducting experiments on the first three datasets. The results show our extended model can not only preserve a higher accuracy, but also achieve a higher efficiency. PMID:26924892

  12. Modeling Gaussian distributions of wave runup using parameterizations for setup and swash

    NASA Astrophysics Data System (ADS)

    Stockdon, H. F.

    2010-12-01

    Design plans for coastal protection structures, predictions of dune overtopping during a storm, and assessments of coastal vulnerability to long-term changes in wave climate require knowledge of water levels at the shoreline, including the contribution from waves. When hydrodynamic modeling of swash motions is not available or practical, because of large temporal/spatial scales or unknown boundary conditions and input spectra, parameterizations of the elevation of wave runup must be used. Parameterizations, which link offshore wave forcing, beach morphology, and local water levels, often represent a statistical measure of runup, commonly the 2% exceedence value. However, in some applications, the 2% exceedence level may not be the most appropriate value, and another statistic may be more appropriate. Stockdon et al. (2006) parameterized the 2% exceedence value for runup as the sum of two dynamically different processes: (1) setup, the wave-induced, time-averaged water level at the shoreline, and (2) swash, the time-varying fluctuations about the mean. Because water levels at the shoreline are well approximated by a Gaussian distribution, this definition of runup also carries statistical meaning: setup and significant swash excursion represent the mean and standard deviation, respectively, of a water-level time series. Consequently, parameterizations for setup and swash can be used to model a Gaussian distribution that represents all runup levels for a given set of conditions. Comparisons between parameter-based, modeled Gaussian distributions and observed water-level distributions from three field experiments at the Field Research Facility in Duck, NC, show a mean difference, averaged across all probability levels, of 18 cm and a RMS difference of 55 cm. Reconstruction of the full water-level distribution expands the application of setup and swash parameterizations by allowing the estimate of a wider range of runup statistics. For example, the long

  13. Synthetic ECG Generation and Bayesian Filtering Using a Gaussian Wave-Based Dynamical Model

    PubMed Central

    Sayadi, Omid; Shamsollahi, Mohammad B.; Clifford, Gari D.

    2011-01-01

    In this paper, we describe a Gaussian wave-based state space to model the temporal dynamics of electrocardiogram (ECG) signals. It is shown that this model may be effectively used for generating synthetic ECGs as well as separate characteristic waves (CWs) such as the atrial and ventricular complexes. The model uses separate state variables for each CW, i.e. P, QRS and T, and hence is capable of generating individual synthetic CWs as well as realistic ECG signals. The model is therefore useful for generating arrhythmias. Simulations of sinus bradycardia, sinus tachycardia, ventricular flutter, atrial fibrillation, and ventricular tachycardia are presented. In addition, discrete versions of the equations are presented for a model-based Bayesian framework for denoising. This framework, together with an extended Kalman filter (EKF) and extended Kalman smoother (EKS), were used for denoising the ECG for both normal rhythms and arrhythmias. For evaluating the denoising performance the signal-to-noise ratio (SNR) improvement of the filter outputs and clinical parameter stability were studied. The results demonstrate superiority over a wide range of input SNRs, achieving a maximum 12.7 dB improvement. Results indicate that preventing clinically relevant distortion of the ECG is sensitive to the number of model parameters. Models are presented which do not exhibit such distortions. The approach presented in this paper may therefore serve as an effective framework for synthetic ECG generation and model-based filtering of noisy ECG recordings. PMID:20720288

  14. Synthetic ECG generation and Bayesian filtering using a Gaussian wave-based dynamical model.

    PubMed

    Sayadi, Omid; Shamsollahi, Mohammad B; Clifford, Gari D

    2010-10-01

    In this paper, we describe a Gaussian wave-based state space to model the temporal dynamics of electrocardiogram (ECG) signals. It is shown that this model may be effectively used for generating synthetic ECGs as well as separate characteristic waves (CWs) such as the atrial and ventricular complexes. The model uses separate state variables for each CW, i.e. P, QRS and T, and hence is capable of generating individual synthetic CWs as well as realistic ECG signals. The model is therefore useful for generating arrhythmias. Simulations of sinus bradycardia, sinus tachycardia, ventricular flutter, atrial fibrillation and ventricular tachycardia are presented. In addition, discrete versions of the equations are presented for a model-based Bayesian framework for denoising. This framework, together with an extended Kalman filter and extended Kalman smoother, was used for denoising the ECG for both normal rhythms and arrhythmias. For evaluating the denoising performance, the signal-to-noise ratio (SNR) improvement of the filter outputs and clinical parameter stability were studied. The results demonstrate superiority over a wide range of input SNRs, achieving a maximum 12.7 dB improvement. Results indicate that preventing clinically relevant distortion of the ECG is sensitive to the number of model parameters. Models are presented which do not exhibit such distortions. The approach presented in this paper may therefore serve as an effective framework for synthetic ECG generation and model-based filtering of noisy ECG recordings.

  15. Development of improved Gaussian dispersion models for cases of downwash past wide buildings using three- dimensional fluid modeling

    NASA Astrophysics Data System (ADS)

    Flowe, Anita Coulter

    1997-08-01

    The objectives of this work were to show that a well- tested three dimensional turbulent kinetic energy/dissipation (k-ɛ) computational model, FLUENT, can be used to model the fluid flow fields and the dispersion effects in the flow fields generated by a variety of building shapes, and to use the data sets to develop parameterizations useful to air quality modeling needs. Once the appropriateness of the computational model was proven through comparisons with experimental results, and data generated for several ratios of building width to building heights, the flow field was examined to determine the length of the recirculation cavity as a function of the ratio of building width to building height both in front of and in the rear of the building. The dimensions of the recirculation cavity in the front of the building have previously not been included in regulatory models, so both the height and length of this front recirculation cavity was parameterized as a function of the ratio of building width to building height. The maximum downdraft was also parameterized as a function of the building width to building height ratio. The dispersive effects were then examined to determine useful parameters. The average concentration in the recirculation cavity was calculated and modeled as a function of ratio of the building width to building height. Finally, because Gaussian models are generally used for regulatory modeling of dispersion effects, the dispersive field was analyzed to find improved dispersion coefficients to use in Gaussian models. The vertical and horizontal dispersion coefficients were computed as a function of distance from the dispersive source for each of the ratios of building width to building height, and then these functions were made a function of the ratio of building width to building height. These new dispersion coefficients, which were a function of both the distance from the stack and the ratio of building width to building height, were then used

  16. Modeling diffusion-weighted MRI as a spatially variant Gaussian mixture: Application to image denoising

    PubMed Central

    Gonzalez, Juan Eugenio Iglesias; Thompson, Paul M.; Zhao, Aishan; Tu, Zhuowen

    2011-01-01

    Purpose: This work describes a spatially variant mixture model constrained by a Markov random field to model high angular resolution diffusion imaging (HARDI) data. Mixture models suit HARDI well because the attenuation by diffusion is inherently a mixture. The goal is to create a general model that can be used in different applications. This study focuses on image denoising and segmentation (primarily the former). Methods: HARDI signal attenuation data are used to train a Gaussian mixture model in which the mean vectors and covariance matrices are assumed to be independent of spatial locations, whereas the mixture weights are allowed to vary at different lattice positions. Spatial smoothness of the data is ensured by imposing a Markov random field prior on the mixture weights. The model is trained in an unsupervised fashion using the expectation maximization algorithm. The number of mixture components is determined using the minimum message length criterion from information theory. Once the model has been trained, it can be fitted to a noisy diffusion MRI volume by maximizing the posterior probability of the underlying noiseless data in a Bayesian framework, recovering a denoised version of the image. Moreover, the fitted probability maps of the mixture components can be used as features for posterior image segmentation. Results: The model-based denoising algorithm proposed here was compared on real data with three other approaches that are commonly used in the literature: Gaussian filtering, anisotropic diffusion, and Rician-adapted nonlocal means. The comparison shows that, at low signal-to-noise ratio, when these methods falter, our algorithm considerably outperforms them. When tractography is performed on the model-fitted data rather than on the noisy measurements, the quality of the output improves substantially. Finally, ventricle and caudate nucleus segmentation experiments also show the potential usefulness of the mixture probability maps for

  17. Dynamic Socialized Gaussian Process Models for Human Behavior Prediction in a Health Social Network.

    PubMed

    Shen, Yelong; Phan, NhatHai; Xiao, Xiao; Jin, Ruoming; Sun, Junfeng; Piniewski, Brigitte; Kil, David; Dou, Dejing

    2016-11-01

    Modeling and predicting human behaviors, such as the level and intensity of physical activity, is a key to preventing the cascade of obesity and helping spread healthy behaviors in a social network. In our conference paper, we have developed a social influence model, named Socialized Gaussian Process (SGP), for socialized human behavior modeling. Instead of explicitly modeling social influence as individuals' behaviors influenced by their friends' previous behaviors, SGP models the dynamic social correlation as the result of social influence. The SGP model naturally incorporates personal behavior factor and social correlation factor (i.e., the homophily principle: Friends tend to perform similar behaviors) into a unified model. And it models the social influence factor (i.e., an individual's behavior can be affected by his/her friends) implicitly in dynamic social correlation schemes. The detailed experimental evaluation has shown the SGP model achieves better prediction accuracy compared with most of baseline methods. However, a Socialized Random Forest model may perform better at the beginning compared with the SGP model. One of the main reasons is the dynamic social correlation function is purely based on the users' sequential behaviors without considering other physical activity-related features. To address this issue, we further propose a novel "multi-feature SGP model" (mfSGP) which improves the SGP model by using multiple physical activity-related features in the dynamic social correlation learning. Extensive experimental results illustrate that the mfSGP model clearly outperforms all other models in terms of prediction accuracy and running time.

  18. Spot counting on fluorescence in situ hybridization in suspension images using Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Liu, Sijia; Sa, Ruhan; Maguire, Orla; Minderman, Hans; Chaudhary, Vipin

    2015-03-01

    Cytogenetic abnormalities are important diagnostic and prognostic criteria for acute myeloid leukemia (AML). A flow cytometry-based imaging approach for FISH in suspension (FISH-IS) was established that enables the automated analysis of several log-magnitude higher number of cells compared to the microscopy-based approaches. The rotational positioning can occur leading to discordance between spot count. As a solution of counting error from overlapping spots, in this study, a Gaussian Mixture Model based classification method is proposed. The Akaike information criterion (AIC) and Bayesian information criterion (BIC) of GMM are used as global image features of this classification method. Via Random Forest classifier, the result shows that the proposed method is able to detect closely overlapping spots which cannot be separated by existing image segmentation based spot detection methods. The experiment results show that by the proposed method we can obtain a significant improvement in spot counting accuracy.

  19. Thermoelectricity in Disordered Organic Semiconductors under the Premise of the Gaussian Disorder Model and Its Variants.

    PubMed

    Mendels, Dan; Tessler, Nir

    2014-09-18

    Using Monte Carlo simulations, we investigate the thermoelectric properties of disordered organic semiconductors under the premise of the Gaussian disorder model and its variants. In doing so, we provide much needed additional dimensions for comparison between these theoretical frameworks and real systems beyond those based on extensively studied charge-transport properties and aim to provide a frame-of-reference for rising interest in these systems for thermoelectric-based applications. To illustrate the potential existing in the implementation of combined transport and thermoelectric investigation, we discuss strategies to experimentally deduce a system's DOS shape and the temperature dependence of its transport energy (which can discern hopping transport from multiple trapping transport), infer whether a system's activation energy originates from inherent energetic disorder or a polaron activation energy (while deducing the given polaron activation energy), and discerning whether a system's energetic disorder is spatially correlated or accompanied by off-diagonal disorder.

  20. Asymptotic properties of Pearson's rank-variate correlation coefficient under contaminated Gaussian model.

    PubMed

    Ma, Rubao; Xu, Weichao; Zhang, Yun; Ye, Zhongfu

    2014-01-01

    This paper investigates the robustness properties of Pearson's rank-variate correlation coefficient (PRVCC) in scenarios where one channel is corrupted by impulsive noise and the other is impulsive noise-free. As shown in our previous work, these scenarios that frequently encountered in radar and/or sonar, can be well emulated by a particular bivariate contaminated Gaussian model (CGM). Under this CGM, we establish the asymptotic closed forms of the expectation and variance of PRVCC by means of the well known Delta method. To gain a deeper understanding, we also compare PRVCC with two other classical correlation coefficients, i.e., Spearman's rho (SR) and Kendall's tau (KT), in terms of the root mean squared error (RMSE). Monte Carlo simulations not only verify our theoretical findings, but also reveal the advantage of PRVCC by an example of estimating the time delay in the particular impulsive noise environment.

  1. Asymptotically Normal and Efficient Estimation of Covariate-Adjusted Gaussian Graphical Model

    PubMed Central

    Chen, Mengjie; Ren, Zhao; Zhao, Hongyu; Zhou, Harrison

    2015-01-01

    A tuning-free procedure is proposed to estimate the covariate-adjusted Gaussian graphical model. For each finite subgraph, this estimator is asymptotically normal and efficient. As a consequence, a confidence interval can be obtained for each edge. The procedure enjoys easy implementation and efficient computation through parallel estimation on subgraphs or edges. We further apply the asymptotic normality result to perform support recovery through edge-wise adaptive thresholding. This support recovery procedure is called ANTAC, standing for Asymptotically Normal estimation with Thresholding after Adjusting Covariates. ANTAC outperforms other methodologies in the literature in a range of simulation studies. We apply ANTAC to identify gene-gene interactions using an eQTL dataset. Our result achieves better interpretability and accuracy in comparison with CAMPE. PMID:27499564

  2. Asymptotic Properties of Pearson's Rank-Variate Correlation Coefficient under Contaminated Gaussian Model

    PubMed Central

    Ma, Rubao; Xu, Weichao; Zhang, Yun; Ye, Zhongfu

    2014-01-01

    This paper investigates the robustness properties of Pearson's rank-variate correlation coefficient (PRVCC) in scenarios where one channel is corrupted by impulsive noise and the other is impulsive noise-free. As shown in our previous work, these scenarios that frequently encountered in radar and/or sonar, can be well emulated by a particular bivariate contaminated Gaussian model (CGM). Under this CGM, we establish the asymptotic closed forms of the expectation and variance of PRVCC by means of the well known Delta method. To gain a deeper understanding, we also compare PRVCC with two other classical correlation coefficients, i.e., Spearman's rho (SR) and Kendall's tau (KT), in terms of the root mean squared error (RMSE). Monte Carlo simulations not only verify our theoretical findings, but also reveal the advantage of PRVCC by an example of estimating the time delay in the particular impulsive noise environment. PMID:25393286

  3. SAR amplitude probability density function estimation based on a generalized Gaussian model.

    PubMed

    Moser, Gabriele; Zerubia, Josiane; Serpico, Sebastiano B

    2006-06-01

    In the context of remotely sensed data analysis, an important problem is the development of accurate models for the statistics of the pixel intensities. Focusing on synthetic aperture radar (SAR) data, this modeling process turns out to be a crucial task, for instance, for classification or for denoising purposes. In this paper, an innovative parametric estimation methodology for SAR amplitude data is proposed that adopts a generalized Gaussian (GG) model for the complex SAR backscattered signal. A closed-form expression for the corresponding amplitude probability density function (PDF) is derived and a specific parameter estimation algorithm is developed in order to deal with the proposed model. Specifically, the recently proposed "method-of-log-cumulants" (MoLC) is applied, which stems from the adoption of the Mellin transform (instead of the usual Fourier transform) in the computation of characteristic functions and from the corresponding generalization of the concepts of moment and cumulant. For the developed GG-based amplitude model, the resulting MoLC estimates turn out to be numerically feasible and are also analytically proved to be consistent. The proposed parametric approach was validated by using several real ERS-1, XSAR, E-SAR, and NASA/JPL airborne SAR images, and the experimental results prove that the method models the amplitude PDF better than several previously proposed parametric models for backscattering phenomena.

  4. Predicting Simulation Parameters of Biological Systems Using a Gaussian Process Model

    PubMed Central

    Zhu, Xiangxin; Welling, Max; Jin, Fang; Lowengrub, John

    2013-01-01

    Finding optimal parameters for simulating biological systems is usually a very difficult and expensive task in systems biology. Brute force searching is infeasible in practice because of the huge (often infinite) search space. In this article, we propose predicting the parameters efficiently by learning the relationship between system outputs and parameters using regression. However, the conventional parametric regression models suffer from two issues, thus are not applicable to this problem. First, restricting the regression function as a certain fixed type (e.g. linear, polynomial, etc.) introduces too strong assumptions that reduce the model flexibility. Second, conventional regression models fail to take into account the fact that a fixed parameter value may correspond to multiple different outputs due to the stochastic nature of most biological simulations, and the existence of a potentially large number of other factors that affect the simulation outputs. We propose a novel approach based on a Gaussian process model that addresses the two issues jointly. We apply our approach to a tumor vessel growth model and the feedback Wright–Fisher model. The experimental results show that our method can predict the parameter values of both of the two models with high accuracy. PMID:23482410

  5. Non-stationary noise estimation using dictionary learning and Gaussian mixture models

    NASA Astrophysics Data System (ADS)

    Hughes, James M.; Rockmore, Daniel N.; Wang, Yang

    2014-02-01

    Stationarity of the noise distribution is a common assumption in image processing. This assumption greatly simplifies denoising estimators and other model parameters and consequently assuming stationarity is often a matter of convenience rather than an accurate model of noise characteristics. The problematic nature of this assumption is exacerbated in real-world contexts, where noise is often highly non-stationary and can possess time- and space-varying characteristics. Regardless of model complexity, estimating the parameters of noise dis- tributions in digital images is a difficult task, and estimates are often based on heuristic assumptions. Recently, sparse Bayesian dictionary learning methods were shown to produce accurate estimates of the level of additive white Gaussian noise in images with minimal assumptions. We show that a similar model is capable of accu- rately modeling certain kinds of non-stationary noise processes, allowing for space-varying noise in images to be estimated, detected, and removed. We apply this modeling concept to several types of non-stationary noise and demonstrate the model's effectiveness on real-world problems, including denoising and segmentation of images according to noise characteristics, which has applications in image forensics.

  6. Laser beam modeling in optical storage systems

    NASA Technical Reports Server (NTRS)

    Treptau, J. P.; Milster, T. D.; Flagello, D. G.

    1991-01-01

    A computer model has been developed that simulates light propagating through an optical data storage system. A model of a laser beam that originates at a laser diode, propagates through an optical system, interacts with a optical disk, reflects back from the optical disk into the system, and propagates to data and servo detectors is discussed.

  7. Ewald Summation Approach to Potential Models of Aqueous Electrolytes Involving Gaussian Charges and Induced Dipoles: Formal and Simulation Results

    SciTech Connect

    Chialvo, Ariel A.; Vlcek, Lukas

    2014-11-01

    We present a detailed derivation of the complete set of expressions required for the implementation of an Ewald summation approach to handle the long-range electrostatic interactions of polar and ionic model systems involving Gaussian charges and induced dipole moments with a particular application to the isobaricisothermal molecular dynamics simulation of our Gaussian Charge Polarizable (GCP) water model and its extension to aqueous electrolytes solutions. The set comprises the individual components of the potential energy, electrostatic potential, electrostatic field and gradient, the electrostatic force and the corresponding virial. Moreover, we show how the derived expressions converge to known point-based electrostatic counterparts when the parameters, defining the Gaussian charge and induced-dipole distributions, are extrapolated to their limiting point values. Finally, we illustrate the Ewald implementation against the current reaction field approach by isothermal-isobaric molecular dynamics of ambient GCP water for which we compared the outcomes of the thermodynamic, microstructural, and polarization behavior.

  8. About a solvable mean field model of a Gaussian spin glass

    NASA Astrophysics Data System (ADS)

    Barra, Adriano; Genovese, Giuseppe; Guerra, Francesco; Tantari, Daniele

    2014-04-01

    In a series of papers, we have studied a modified Hopfield model of a neural network, with learned words characterized by a Gaussian distribution. The model can be represented as a bipartite spin glass, with one party described by dichotomic Ising spins, and the other party by continuous spin variables, with an a priori Gaussian distribution. By application of standard interpolation methods, we have found it useful to compare the neural network model (bipartite) from one side, with two spin glass models, each monopartite, from the other side. Of these, the first is the usual Sherrington-Kirkpatrick model, the second is a spin glass model, with continuous spins and inbuilt highly nonlinear smooth cut-off interactions. This model is an invaluable laboratory for testing all techniques which have been useful in the study of spin glasses. The purpose of this paper is to give a synthetic description of the most peculiar aspects, by stressing the necessary novelties in the treatment. In particular, it will be shown that the control of the infinite volume limit, according to the well-known Guerra-Toninelli strategy, requires in addition one to consider the involvement of the cut-off interaction in the interpolation procedure. Moreover, the control of the ergodic region, the annealed case, cannot be directly achieved through the standard application of the Borel-Cantelli lemma, but requires previous modification of the interaction. This remark could find useful application in other cases. The replica symmetric expression for the free energy can be easily reached through a suitable version of the doubly stochastic interpolation technique. However, this model shares the unique property that the fully broken replica symmetry ansatz can be explicitly calculated. A very simple sum rule connects the general expression of the fully broken free energy trial function with the replica symmetric one. The definite sign of the error term shows that the replica solution is optimal. Then

  9. Modelling of electron beam induced nanowire attraction

    NASA Astrophysics Data System (ADS)

    Bitzer, Lucas A.; Speich, Claudia; Schäfer, David; Erni, Daniel; Prost, Werner; Tegude, Franz J.; Benson, Niels; Schmechel, Roland

    2016-04-01

    Scanning electron microscope (SEM) induced nanowire (NW) attraction or bundling is a well known effect, which is mainly ascribed to structural or material dependent properties. However, there have also been recent reports of electron beam induced nanowire bending by SEM imaging, which is not fully explained by the current models, especially when considering the electro-dynamic interaction between NWs. In this article, we contribute to the understanding of this phenomenon, by introducing an electro-dynamic model based on capacitor and Lorentz force interaction, where the active NW bending is stimulated by an electromagnetic force between individual wires. The model includes geometrical, electrical, and mechanical NW parameters, as well as the influence of the electron beam source parameters and is validated using in-situ observations of electron beam induced GaAs nanowire (NW) bending by SEM imaging.

  10. Laser beam scintillation beyond the turbulent atmosphere A numerical computation

    NASA Technical Reports Server (NTRS)

    Bufton, J. L.; Taylor, L. S.

    1976-01-01

    The extended Huygens-Fresnel formulation for propagation through turbulence is used to examine scintillation of a finite laser beam. The method is demonstrated analytically for propagation beyond a weak Gaussian phase screen. A numerical integration technique is used to extend the results to a more realistic turbulence model. Results are compared with existing Gaussian beam propagation theory.

  11. Projecting nuisance flooding in a warming climate using generalized linear models and Gaussian processes

    NASA Astrophysics Data System (ADS)

    Vandenberg-Rodes, Alexander; Moftakhari, Hamed R.; AghaKouchak, Amir; Shahbaba, Babak; Sanders, Brett F.; Matthew, Richard A.

    2016-11-01

    Nuisance flooding corresponds to minor and frequent flood events that have significant socioeconomic and public health impacts on coastal communities. Yearly averaged local mean sea level can be used as proxy to statistically predict the impacts of sea level rise (SLR) on the frequency of nuisance floods (NFs). In this study, we use generalized linear models (GLM) and Gaussian Process (GP) models combined to (i) estimate the frequency of NF associated with the change in mean sea level, and (ii) quantify the associated uncertainties via a novel and statistically robust approach. We calibrate our models to the water level data from 18 tide gauges along the coasts of United States, and after validation, we estimate the frequency of NF associated with the SLR projections in year 2030 (under RCPs 2.6 and 8.5), along with their 90% bands, at each gauge. The historical NF-SLR data are very noisy, and show large changes in variability (heteroscedasticity) with SLR. Prior models in the literature do not properly account for the observed heteroscedasticity, and thus their projected uncertainties are highly suspect. Among the models used in this study, the Negative Binomial Distribution GLM with GP best characterizes the uncertainties associated with NF estimates; on validation data ≈93% of the points fall within the 90% credible limit, showing our approach to be a robust model for uncertainty quantification.

  12. Errors incurred in a plane-wave-type expansion of a Gaussian beam. [in laser force calculations on light scattering aerosol experiments

    NASA Technical Reports Server (NTRS)

    Kattawar, G. W.

    1980-01-01

    The multipole expansion obtained by Morita et al. (1968) of the Gaussian laser beam used to levitate an aerosol particle in order that its complete phase matrix may be measured is compared with that of Tsai and Pogorzelski (1975) in order to demonstrate the effect of the incorrect expansion used by Morita. Errors incurred by the use of an equation in which one side satisfies the scalar wave equation while the other side does not and can be reduced to a plane wave amplitude are calculated as functions of the inverse of the wave number times the beam waist, the wave number times the radial spherical coordinate and the angular spherical coordinate. Errors on the order of a few percent, considered undetectable are obtained in the squared-field amplitudes due to the expansion, however, they are found to become significant (several tens of percent) when the angle is zero. It is concluded that the expansion of Morita should only be used in the regions where the spherical angle is less than 0.01 and its product with the wave number and the radial spherical coordinate is less than unity.

  13. Temperature increase effects on a double-pass cavity type II second-harmonic generation: a model for depleted Gaussian continuous waves.

    PubMed

    Sabaeian, Mohammad; Jalil-Abadi, Fatemeh Sedaghat; Rezaee, Mostafa Mohammad; Motazedian, Alireza; Shahzadeh, Mohammadreza

    2015-02-01

    In this work, the effect of temperature increase on the efficiency of a double-pass cavity type II second-harmonic generation (SHG) is investigated. To this end, a depleted wave model describing the continuous-wave SHG process with fundamental Gaussian waves was developed. First, six coupled equations were proposed to model a double-pass cavity to generate the second harmonic of a Gaussian fundamental wave in type II configuration. Then, the effect of temperature increase in the nonlinear crystal due to the optical absorption was modeled. To do this, a mismatched phase arising from changes in refractive indices was added to the coupled equations. Although the nondepleted assumption is usually used in such problems, a simultaneous solving of coupled equations with assumption of fundamental beam depletion was performed. The results were obtained by a homemade code written in Intel Fortran, and show how the efficiency of the SHG process decreases when the crystal is warmed up by 5, 10, and 15 K. Dramatic reductions in SHG efficiency were observed due to small changes in temperature. The results show excellent agreement with the experimental data [Opt. Commun.173, 311-314 (2000)].

  14. No-reference peak signal to noise ratio estimation based on generalized Gaussian modeling of transform coefficient distributions

    NASA Astrophysics Data System (ADS)

    Ryu, Ji-Woo; Lee, Seon-Oh; Sim, Dong-Gyu; Han, Jong-Ki

    2012-02-01

    We present a no-reference peak signal to noise ratio (PSNR) estimation algorithm based on discrete cosine transform (DCT) coefficient distributions from H.264/MPEG-4 part 10 advanced video codec (H.264/AVC) bitstreams. To estimate the PSNR of a compressed picture without the original picture on the decoder side, it is important to model the distribution of transform coefficients obtained from quantized coefficients accurately. Whereas several conventional algorithms use the Laplacian or Cauchy distribution to model the DCT coefficient distribution, the proposed algorithm uses a generalized Gaussian distribution. Pearson's χ2 (chi-square) test was applied to show that the generalized Gaussian distribution is more appropriate than the other models for modeling the transform coefficients. The χ2 test was also used to find optimum parameters for the generalized Gaussian model. It was found that the generalized Gaussian model improves the accuracy of the DCT coefficient distribution, thus reducing the mean squared error between the real and the estimated PSNR.

  15. Modeling of the cross-beam energy transfer with realistic inertial-confinement-fusion beams in a large-scale hydrocode.

    PubMed

    Colaïtis, A; Duchateau, G; Ribeyre, X; Tikhonchuk, V

    2015-01-01

    A method for modeling realistic laser beams smoothed by kinoform phase plates is presented. The ray-based paraxial complex geometrical optics (PCGO) model with Gaussian thick rays allows one to create intensity variations, or pseudospeckles, that reproduce the beam envelope, contrast, and high-intensity statistics predicted by paraxial laser propagation codes. A steady-state cross-beam energy-transfer (CBET) model is implemented in a large-scale radiative hydrocode based on the PCGO model. It is used in conjunction with the realistic beam modeling technique to study the effects of CBET between coplanar laser beams on the target implosion. The pseudospeckle pattern imposed by PCGO produces modulations in the irradiation field and the shell implosion pressure. Cross-beam energy transfer between beams at 20(∘) and 40(∘) significantly degrades the irradiation symmetry by amplifying low-frequency modes and reducing the laser-capsule coupling efficiency, ultimately leading to large modulations of the shell areal density and lower convergence ratios. These results highlight the role of laser-plasma interaction and its influence on the implosion dynamics.

  16. Dynamic Modelling of Aquifer Level Using Space-Time Kriging and Sequential Gaussian Simulation

    NASA Astrophysics Data System (ADS)

    Varouchakis, Emmanouil A.; Hristopulos, Dionisis T.

    2016-04-01

    Geostatistical models are widely used in water resources management projects to represent and predict the spatial variability of aquifer levels. In addition, they can be applied as surrogate to numerical hydrological models if the hydrogeological data needed to calibrate the latter are not available. For space-time data, spatiotemporal geostatistical approaches can model the aquifer level variability by incorporating complex space-time correlations. A major advantage of such models is that they can improve the reliability of predictions compared to purely spatial or temporal models in areas with limited spatial and temporal data availability. The identification and incorporation of a spatiotemporal trend model can further increase the accuracy of groundwater level predictions. Our goal is to derive a geostatistical model of dynamic aquifer level changes in a sparsely gauged basin on the island of Crete (Greece). The available data consist of bi-annual (dry and wet hydrological period) groundwater level measurements at 11 monitoring locations for the time period 1981 to 2010. We identify a spatiotemporal trend function that follows the overall drop of the aquifer level over the study period. The correlation of the residuals is modeled using a non-separable space-time variogram function based on the Spartan covariance family. The space-time Residual Kriging (STRK) method is then applied to combine the estimated trend and the residuals into dynamic predictions of groundwater level. Sequential Gaussian Simulation is also employed to determine the uncertainty of the spatiotemporal model (trend and covariance) parameters. This stochastic modelling approach produces multiple realizations, ranks the prediction results on the basis of specified criteria, and captures the range of the uncertainty. The model projections recommend that in 2032 a part of the basin will be under serious threat as the aquifer level will approximate the sea level boundary.

  17. Exponential Gaussian approach for spectral modeling: The EGO algorithm I. Band saturation

    NASA Astrophysics Data System (ADS)

    Pompilio, Loredana; Pedrazzi, Giuseppe; Sgavetti, Maria; Cloutis, Edward A.; Craig, Michael A.; Roush, Ted L.

    2009-06-01

    Curve fitting techniques are a widespread approach to spectral modeling in the VNIR range [Burns, R.G., 1970. Am. Mineral. 55, 1608-1632; Singer, R.B., 1981. J. Geophys. Res. 86, 7967-7982; Roush, T.L., Singer, R.B., 1986. J. Geophys. Res. 91, 10301-10308; Sunshine, J.M., Pieters, C.M., Pratt, S.F., 1990. J. Geophys. Res. 95, 6955-6966]. They have been successfully used to model reflectance spectra of powdered minerals and mixtures, natural rock samples and meteorites, and unknown remote spectra of the Moon, Mars and asteroids. Here, we test a new decomposition algorithm to model VNIR reflectance spectra and call it Exponential Gaussian Optimization (EGO). The EGO algorithm is derived from and complementary to the MGM of Sunshine et al. [Sunshine, J.M., Pieters, C.M., Pratt, S.F., 1990. J. Geophys. Res. 95, 6955-6966]. The general EGO equation has been especially designed to account for absorption bands affected by saturation and asymmetry. Here we present a special case of EGO and address it to model saturated electronic transition bands. Our main goals are: (1) to recognize and model band saturation in reflectance spectra; (2) to develop a basic approach for decomposition of rock spectra, where effects due to saturation are most prevalent; (3) to reduce the uncertainty related to quantitative estimation when band saturation is occurring. In order to accomplish these objectives, we simulate flat bands starting from pure Gaussians and test the EGO algorithm on those simulated spectra first. Then we test the EGO algorithm on a number of measurements acquired on powdered pyroxenes having different compositions and average grain size and binary mixtures of orthopyroxenes with barium sulfate. The main results arising from this study are: (1) EGO model is able to numerically account for the occurrence of saturation effects on reflectance spectra of powdered minerals and mixtures; (2) the systematic dilution of a strong absorber using a bright neutral material is not

  18. George: Gaussian Process regression

    NASA Astrophysics Data System (ADS)

    Foreman-Mackey, Daniel

    2015-11-01

    George is a fast and flexible library, implemented in C++ with Python bindings, for Gaussian Process regression useful for accounting for correlated noise in astronomical datasets, including those for transiting exoplanet discovery and characterization and stellar population modeling.

  19. Neutral Beam Ion Loss Modeling for NSTX

    SciTech Connect

    D. Mikkelsen; D.S. Darrow; L. Grisham; R. Akers; S. Kaye

    1999-06-01

    A numerical model, EIGOL, has been developed to calculate the loss rate of neutral beam ions from NSTX and the resultant power density on the plasma facing components. This model follows the full gyro-orbit of the beam ions, which can be a significant fraction of the minor radius. It also includes the three-dimensional structure of the plasma facing components inside NSTX. Beam ion losses from two plasma conditions have been compared: {beta} = 23%, q{sub 0} = 0.8, and {beta} = 40%, q{sub 0} = 2.6. Global losses are computed to be 4% and 19%, respectively, and the power density on the rf antenna is near the maximum tolerable levels in the latter case.

  20. Model fitting of kink waves in the solar atmosphere: Gaussian damping and time-dependence

    NASA Astrophysics Data System (ADS)

    Morton, R. J.; Mooroogen, K.

    2016-09-01

    Aims: Observations of the solar atmosphere have shown that magnetohydrodynamic waves are ubiquitous throughout. Improvements in instrumentation and the techniques used for measurement of the waves now enables subtleties of competing theoretical models to be compared with the observed waves behaviour. Some studies have already begun to undertake this process. However, the techniques employed for model comparison have generally been unsuitable and can lead to erroneous conclusions about the best model. The aim here is to introduce some robust statistical techniques for model comparison to the solar waves community, drawing on the experiences from other areas of astrophysics. In the process, we also aim to investigate the physics of coronal loop oscillations. Methods: The methodology exploits least-squares fitting to compare models to observational data. We demonstrate that the residuals between the model and observations contain significant information about the ability for the model to describe the observations, and show how they can be assessed using various statistical tests. In particular we discuss the Kolmogorov-Smirnoff one and two sample tests, as well as the runs test. We also highlight the importance of including any observational trend line in the model-fitting process. Results: To demonstrate the methodology, an observation of an oscillating coronal loop undergoing standing kink motion is used. The model comparison techniques provide evidence that a Gaussian damping profile provides a better description of the observed wave attenuation than the often used exponential profile. This supports previous analysis from Pascoe et al. (2016, A&A, 585, L6). Further, we use the model comparison to provide evidence of time-dependent wave properties of a kink oscillation, attributing the behaviour to the thermodynamic evolution of the local plasma.

  1. State-space models’ dirty little secrets: even simple linear Gaussian models can have estimation problems

    PubMed Central

    Auger-Méthé, Marie; Field, Chris; Albertsen, Christoffer M.; Derocher, Andrew E.; Lewis, Mark A.; Jonsen, Ian D.; Mills Flemming, Joanna

    2016-01-01

    State-space models (SSMs) are increasingly used in ecology to model time-series such as animal movement paths and population dynamics. This type of hierarchical model is often structured to account for two levels of variability: biological stochasticity and measurement error. SSMs are flexible. They can model linear and nonlinear processes using a variety of statistical distributions. Recent ecological SSMs are often complex, with a large number of parameters to estimate. Through a simulation study, we show that even simple linear Gaussian SSMs can suffer from parameter- and state-estimation problems. We demonstrate that these problems occur primarily when measurement error is larger than biological stochasticity, the condition that often drives ecologists to use SSMs. Using an animal movement example, we show how these estimation problems can affect ecological inference. Biased parameter estimates of a SSM describing the movement of polar bears (Ursus maritimus) result in overestimating their energy expenditure. We suggest potential solutions, but show that it often remains difficult to estimate parameters. While SSMs are powerful tools, they can give misleading results and we urge ecologists to assess whether the parameters can be estimated accurately before drawing ecological conclusions from their results. PMID:27220686

  2. State-space models’ dirty little secrets: even simple linear Gaussian models can have estimation problems

    NASA Astrophysics Data System (ADS)

    Auger-Méthé, Marie; Field, Chris; Albertsen, Christoffer M.; Derocher, Andrew E.; Lewis, Mark A.; Jonsen, Ian D.; Mills Flemming, Joanna

    2016-05-01

    State-space models (SSMs) are increasingly used in ecology to model time-series such as animal movement paths and population dynamics. This type of hierarchical model is often structured to account for two levels of variability: biological stochasticity and measurement error. SSMs are flexible. They can model linear and nonlinear processes using a variety of statistical distributions. Recent ecological SSMs are often complex, with a large number of parameters to estimate. Through a simulation study, we show that even simple linear Gaussian SSMs can suffer from parameter- and state-estimation problems. We demonstrate that these problems occur primarily when measurement error is larger than biological stochasticity, the condition that often drives ecologists to use SSMs. Using an animal movement example, we show how these estimation problems can affect ecological inference. Biased parameter estimates of a SSM describing the movement of polar bears (Ursus maritimus) result in overestimating their energy expenditure. We suggest potential solutions, but show that it often remains difficult to estimate parameters. While SSMs are powerful tools, they can give misleading results and we urge ecologists to assess whether the parameters can be estimated accurately before drawing ecological conclusions from their results.

  3. A multivariate multilevel Gaussian model with a mixed effects structure in the mean and covariance part.

    PubMed

    Li, Baoyue; Bruyneel, Luk; Lesaffre, Emmanuel

    2014-05-20

    A traditional Gaussian hierarchical model assumes a nested multilevel structure for the mean and a constant variance at each level. We propose a Bayesian multivariate multilevel factor model that assumes a multilevel structure for both the mean and the covariance matrix. That is, in addition to a multilevel structure for the mean we also assume that the covariance matrix depends on covariates and random effects. This allows to explore whether the covariance structure depends on the values of the higher levels and as such models heterogeneity in the variances and correlation structure of the multivariate outcome across the higher level values. The approach is applied to the three-dimensional vector of burnout measurements collected on nurses in a large European study to answer the research question whether the covariance matrix of the outcomes depends on recorded system-level features in the organization of nursing care, but also on not-recorded factors that vary with countries, hospitals, and nursing units. Simulations illustrate the performance of our modeling approach.

  4. A Gaussian mixture model based cost function for parameter estimation of chaotic biological systems

    NASA Astrophysics Data System (ADS)

    Shekofteh, Yasser; Jafari, Sajad; Sprott, Julien Clinton; Hashemi Golpayegani, S. Mohammad Reza; Almasganj, Farshad

    2015-02-01

    As we know, many biological systems such as neurons or the heart can exhibit chaotic behavior. Conventional methods for parameter estimation in models of these systems have some limitations caused by sensitivity to initial conditions. In this paper, a novel cost function is proposed to overcome those limitations by building a statistical model on the distribution of the real system attractor in state space. This cost function is defined by the use of a likelihood score in a Gaussian mixture model (GMM) which is fitted to the observed attractor generated by the real system. Using that learned GMM, a similarity score can be defined by the computed likelihood score of the model time series. We have applied the proposed method to the parameter estimation of two important biological systems, a neuron and a cardiac pacemaker, which show chaotic behavior. Some simulated experiments are given to verify the usefulness of the proposed approach in clean and noisy conditions. The results show the adequacy of the proposed cost function.

  5. Joint conditional Gaussian graphical models with multiple sources of genomic data

    PubMed Central

    Chun, Hyonho; Chen, Min; Li, Bing; Zhao, Hongyu

    2013-01-01

    It is challenging to identify meaningful gene networks because biological interactions are often condition-specific and confounded with external factors. It is necessary to integrate multiple sources of genomic data to facilitate network inference. For example, one can jointly model expression datasets measured from multiple tissues with molecular marker data in so-called genetical genomic studies. In this paper, we propose a joint conditional Gaussian graphical model (JCGGM) that aims for modeling biological processes based on multiple sources of data. This approach is able to integrate multiple sources of information by adopting conditional models combined with joint sparsity regularization. We apply our approach to a real dataset measuring gene expression in four tissues (kidney, liver, heart, and fat) from recombinant inbred rats. Our approach reveals that the liver tissue has the highest level of tissue-specific gene regulations among genes involved in insulin responsive facilitative sugar transporter mediated glucose transport pathway, followed by heart and fat tissues, and this finding can only be attained from our JCGGM approach. PMID:24381584

  6. Spectral recovery of outdoor illumination by an extension of the Bayesian inverse approach to the Gaussian mixture model.

    PubMed

    Peyvandi, Shahram; Amirshahi, Seyed Hossein; Hernández-Andrés, Javier; Nieves, Juan Luis; Romero, Javier

    2012-10-01

    The Bayesian inference approach to the inverse problem of spectral signal recovery has been extended to mixtures of Gaussian probability distributions of a training dataset in order to increase the efficiency of estimating the spectral signal from the response of a transformation system. Bayesian (BIC) and Akaike (AIC) information criteria were assessed in order to provide the Gaussian mixture model (GMM) with the optimum number of clusters within the spectral space. The spectra of 2600 solar illuminations measured in Granada (Spain) were recovered over the range of 360-830 nm from their corresponding tristimulus values using a linear model of basis functions, the Wiener inverse (WI) method, and the Bayesian inverse approach extended to the GMM (BGMM). A model of Gaussian mixtures for solar irradiance was deemed to be more appropriate than a single Gaussian distribution for representing the probability distribution of the solar spectral data. The results showed that the estimation performance of the BGMM method was better than either the linear model or the WI method for the spectral approximation of daylight from the three-dimensional tristimulus values.

  7. Coarse grained normal mode analysis vs. refined Gaussian Network Model for protein residue-level structural fluctuations.

    PubMed

    Park, Jun-Koo; Jernigan, Robert; Wu, Zhijun

    2013-01-01

    We investigate several approaches to coarse grained normal mode analysis on protein residual-level structural fluctuations by choosing different ways of representing the residues and the forces among them. Single-atom representations using the backbone atoms C(α), C, N, and C(β) are considered. Combinations of some of these atoms are also tested. The force constants between the representative atoms are extracted from the Hessian matrix of the energy function and served as the force constants between the corresponding residues. The residue mean-square-fluctuations and their correlations with the experimental B-factors are calculated for a large set of proteins. The results are compared with all-atom normal mode analysis and the residue-level Gaussian Network Model. The coarse-grained methods perform more efficiently than all-atom normal mode analysis, while their B-factor correlations are also higher. Their B-factor correlations are comparable with those estimated by the Gaussian Network Model and in many cases better. The extracted force constants are surveyed for different pairs of residues with different numbers of separation residues in sequence. The statistical averages are used to build a refined Gaussian Network Model, which is able to predict residue-level structural fluctuations significantly better than the conventional Gaussian Network Model in many test cases.

  8. Neural network-based nonlinear model predictive control vs. linear quadratic gaussian control

    USGS Publications Warehouse

    Cho, C.; Vance, R.; Mardi, N.; Qian, Z.; Prisbrey, K.

    1997-01-01

    One problem with the application of neural networks to the multivariable control of mineral and extractive processes is determining whether and how to use them. The objective of this investigation was to compare neural network control to more conventional strategies and to determine if there are any advantages in using neural network control in terms of set-point tracking, rise time, settling time, disturbance rejection and other criteria. The procedure involved developing neural network controllers using both historical plant data and simulation models. Various control patterns were tried, including both inverse and direct neural network plant models. These were compared to state space controllers that are, by nature, linear. For grinding and leaching circuits, a nonlinear neural network-based model predictive control strategy was superior to a state space-based linear quadratic gaussian controller. The investigation pointed out the importance of incorporating state space into neural networks by making them recurrent, i.e., feeding certain output state variables into input nodes in the neural network. It was concluded that neural network controllers can have better disturbance rejection, set-point tracking, rise time, settling time and lower set-point overshoot, and it was also concluded that neural network controllers can be more reliable and easy to implement in complex, multivariable plants.

  9. A Gaussian mixture model for definition of lung tumor volumes in positron emission tomography.

    PubMed

    Aristophanous, Michalis; Penney, Bill C; Martel, Mary K; Pelizzari, Charles A

    2007-11-01

    The increased interest in 18F-fluorodeoxyglucose (FDG) positron emission tomography (PET) in radiation treatment planning in the past five years necessitated the independent and accurate segmentation of gross tumor volume (GTV) from FDG-PET scans. In some studies the radiation oncologist contours the GTV based on a computed tomography scan, while incorporating pertinent data from the PET images. Alternatively, a simple threshold, typically 40% of the maximum intensity, has been employed to differentiate tumor from normal tissue, while other researchers have developed algorithms to aid the PET based GTV definition. None of these methods, however, results in reliable PET tumor segmentation that can be used for more sophisticated treatment plans. For this reason, we developed a Gaussian mixture model (GMM) based segmentation technique on selected PET tumor regions from non-small cell lung cancer patients. The purpose of this study was to investigate the feasibility of using a GMM-based tumor volume definition in a robust, reliable and reproducible way. A GMM relies on the idea that any distribution, in our case a distribution of image intensities, can be expressed as a mixture of Gaussian densities representing different classes. According to our implementation, each class belongs to one of three regions in the image; the background (B), the uncertain (U) and the target (T), and from these regions we can obtain the tumor volume. User interaction in the implementation is required, but is limited to the initialization of the model parameters and the selection of an "analysis region" to which the modeling is restricted. The segmentation was developed on three and tested on another four clinical cases to ensure robustness against differences observed in the clinic. It also compared favorably with thresholding at 40% of the maximum intensity and a threshold determination function based on tumor to background image intensities proposed in a recent paper. The parts of the

  10. A Gaussian mixture model for definition of lung tumor volumes in positron emission tomography

    SciTech Connect

    Aristophanous, Michalis; Penney, Bill C.; Martel, Mary K.; Pelizzari, Charles A.

    2007-11-15

    The increased interest in {sup 18}F-fluorodeoxyglucose (FDG) positron emission tomography (PET) in radiation treatment planning in the past five years necessitated the independent and accurate segmentation of gross tumor volume (GTV) from FDG-PET scans. In some studies the radiation oncologist contours the GTV based on a computed tomography scan, while incorporating pertinent data from the PET images. Alternatively, a simple threshold, typically 40% of the maximum intensity, has been employed to differentiate tumor from normal tissue, while other researchers have developed algorithms to aid the PET based GTV definition. None of these methods, however, results in reliable PET tumor segmentation that can be used for more sophisticated treatment plans. For this reason, we developed a Gaussian mixture model (GMM) based segmentation technique on selected PET tumor regions from non-small cell lung cancer patients. The purpose of this study was to investigate the feasibility of using a GMM-based tumor volume definition in a robust, reliable and reproducible way. A GMM relies on the idea that any distribution, in our case a distribution of image intensities, can be expressed as a mixture of Gaussian densities representing different classes. According to our implementation, each class belongs to one of three regions in the image; the background (B), the uncertain (U) and the target (T), and from these regions we can obtain the tumor volume. User interaction in the implementation is required, but is limited to the initialization of the model parameters and the selection of an 'analysis region' to which the modeling is restricted. The segmentation was developed on three and tested on another four clinical cases to ensure robustness against differences observed in the clinic. It also compared favorably with thresholding at 40% of the maximum intensity and a threshold determination function based on tumor to background image intensities proposed in a recent paper. The parts of

  11. The Application of Gaussian Mixture Models for Signal Quantification in MALDI-ToF Mass Spectrometry of Peptides

    PubMed Central

    Spainhour, John Christian G.; Janech, Michael G.; Schwacke, John H.; Velez, Juan Carlos Q.; Ramakrishnan, Viswanathan

    2014-01-01

    Matrix assisted laser desorption/ionization time-of-flight (MALDI-TOF) coupled with stable isotope standards (SIS) has been used to quantify native peptides. This peptide quantification by MALDI-TOF approach has difficulties quantifying samples containing peptides with ion currents in overlapping spectra. In these overlapping spectra the currents sum together, which modify the peak heights and make normal SIS estimation problematic. An approach using Gaussian mixtures based on known physical constants to model the isotopic cluster of a known compound is proposed here. The characteristics of this approach are examined for single and overlapping compounds. The approach is compared to two commonly used SIS quantification methods for single compound, namely Peak Intensity method and Riemann sum area under the curve (AUC) method. For studying the characteristics of the Gaussian mixture method, Angiotensin II, Angiotensin-2-10, and Angiotenisn-1-9 and their associated SIS peptides were used. The findings suggest, Gaussian mixture method has similar characteristics as the two methods compared for estimating the quantity of isolated isotopic clusters for single compounds. All three methods were tested using MALDI-TOF mass spectra collected for peptides of the renin-angiotensin system. The Gaussian mixture method accurately estimated the native to labeled ratio of several isolated angiotensin peptides (5.2% error in ratio estimation) with similar estimation errors to those calculated using peak intensity and Riemann sum AUC methods (5.9% and 7.7%, respectively). For overlapping angiotensin peptides, (where the other two methods are not applicable) the estimation error of the Gaussian mixture was 6.8%, which is within the acceptable range. In summary, for single compounds the Gaussian mixture method is equivalent or marginally superior compared to the existing methods of peptide quantification and is capable of quantifying overlapping (convolved) peptides within the

  12. Experimentally validated pencil beam scanning source model in TOPAS.

    PubMed

    Lin, Liyong; Kang, Minglei; Solberg, Timothy D; Ainsley, Christopher G; McDonough, James E

    2014-11-21

    The presence of a low-dose envelope, or 'halo', in the fluence profile of a proton spot can increase the output of a pencil beam scanning field by over 10%. This study evaluated whether the Monte Carlo simulation code, TOPAS 1.0-beta 8, based on Geant4.9.6 with its default physics list, can predict the spot halo at depth in phantom by incorporating a halo model within the proton source distribution. Proton sources were modelled using three 2D Gaussian functions, and optimized until simulated spot profiles matched measurements at the phantom surface out to a radius of 100 mm. Simulations were subsequently compared with profiles measured using EBT3 film in Solidwater® phantoms at various depths for 100, 115, 150, 180, 210 and 225 MeV proton beams. Simulations predict measured profiles within a 1 mm distance to agreement for 2D profiles extending to the 0.1% isodose, and within 1 mm/1% Gamma criteria over the integrated curve of spot profile as a function of radius. For isodose lines beyond 0.1% of the central spot dose, the simulated primary spot sigma is smaller than the measurement by up to 15%, and can differ by over 1 mm. The choice of particle interaction algorithm and phantom material were found to cause ~1 mm range uncertainty, a maximal 5% (0.3 mm) difference in spot sigma, and maximal 1 mm and ~2 mm distance to agreement in isodoses above and below the 0.1% level, respectively. Based on these observations, therefore, the selection of physics model and the application of Solidwater® as water replacement material in simulation and measurement should be used with caution.

  13. Modeling of the vibrating beam accelerometer nonlinearities

    NASA Astrophysics Data System (ADS)

    Romanowski, P. A.; Knop, R. C.

    Successful modeling and processing of the output of a quartz Vibrating Beam Accelerometer (VBA), whose errors are inherently nonlinear with respect to input acceleration, are reported. The VBA output, with two signals that are frequencies of vibrating quartz beams, has inherent higher-order terms. In order to avoid vibration rectification errors, the signal output must be sampled at a rapid rate and the output must be reduced using a nonlinear model. The present model, with acceleration as a function of frequency, is derived by a least-squares process where the covariance matrix is obtained from simulated data. The system performance is found to be acceptable to strategic levels, and it is shown that a vibration rectification error of 400 micrograms/sq g can be reduced to 4 micrograms/sq g by using the processor electronics and a nonlinear model.

  14. Equivalent beam modeling using numerical reduction techniques

    NASA Technical Reports Server (NTRS)

    Chapman, J. M.; Shaw, F. H.

    1987-01-01

    Numerical procedures that can accomplish model reductions for space trusses were developed. Three techniques are presented that can be implemented using current capabilities within NASTRAN. The proposed techniques accomplish their model reductions numerically through use of NASTRAN structural analyses and as such are termed numerical in contrast to the previously developed analytical techniques. Numerical procedures are developed that permit reductions of large truss models containing full modeling detail of the truss and its joints. Three techniques are presented that accomplish these model reductions with various levels of structural accuracy. These numerical techniques are designated as equivalent beam, truss element reduction, and post-assembly reduction methods. These techniques are discussed in detail.

  15. Modification of Gaussian elimination to identify hydrocarbon reservoir (the thin- bed model reconstruction)

    NASA Astrophysics Data System (ADS)

    Sayankina, M. K.; Smaglichenko, A. V.; Lukianitsa, A. A.

    2012-04-01

    Passive seismic tomography can be not expensive and effective tool for hydrocarbon exploration as well for challenging task of environment protection. In this paper we focus our attention on the thin-bed model (20 m thick) that has been defined by Haitao Ren and Gennady Golobushin (2007). Their 2-D model includes both water- and gas- saturated reservoirs cases. We supplemented this model by synthetic sources assuming that they imitate possible micro seismicity. Positions of sources were selected in order to resolve the dipping thin model from point of view ray's theory. Stations of the surface network were located to be able register seismic waves that transmitted via thin-bed. The medium parameters were found so that to approximate the layer by means of blocks. Two large zones with significant velocity contrast between them correspond to the water-saturated and the gas-saturated reservoirs. Properties of rocks define anomalies in zones that surround reservoirs. It is known that such kind of tomographic structures are normally poorly resolved because of over- or under- determined systems of arising linear equations. Therefore synthetic data were processed applying new differentiated approach, which is stable at least with respect to parameterization errors. The base of the approach is the modification of Gaussian elimination that has been developed by Tatyana A. Smaglichenko (2011) with purpose to decrease level of any error by means of division of initial system into sub-systems. In this study we demonstrate stages of the thin-bed model reconstruction and ability of inversion technique to adequately detect the complicated parts of this model. With help of this example, we conclude that under defined physical conditions passive tomography identifies details of hydrocarbon reservoir.

  16. Highway traffic segmentation using super-resolution and Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Yousef, Amr Hussein; Flora, Jeff; Iftekharuddin, Khan

    2013-09-01

    One benefit of employing computer vision techniques to extract individual vehicles from a highway traffic scene is the abundance of networked, traffic surveillance cameras that may be leveraged as the input video. However, the acquisition sensors that are monitoring the highway traffic will have very limited quality. Additionally, video streams are heavily compressed, causing noise and, in some cases, visible artifacts to be introduced into the video. Further challenges are presented by external environmental and weather conditions, such as rain, fog, and snow, that cause video blurring or noise. The resulting output of a segmentation algorithm yields poorer results, with many vehicles undetected or partially detected. Our goal is to extract individual vehicles from a highway traffic scenes using super-resolution and the utilization of Gaussian mixture model algorithm (GMM). We used a speeded-up enhanced stochastic Wiener filter for SR reconstruction and restoration. It can be used to remove artifacts and enhance the visual quality of the reconstructed images and can be implemented efficiently in the frequency domain. The filter derivation depends on the continuous-discrete-continuous (CDC) model that represents most of the degradations encountered during the image-gathering and image-display processes. Then, we use GMM followed by the clustering of individual vehicles. Individual vehicles are detected from the segmented scene through the use of a series of morphological operations, followed by two-dimensional connected component labeling. We evaluate our hybrid approach quantitatively in the segmentation of the extracted vehicles.

  17. Learning Latent Variable Gaussian Graphical Model for Biomolecular Network with Low Sample Complexity

    PubMed Central

    Liu, Quan

    2016-01-01

    Learning a Gaussian graphical model with latent variables is ill posed when there is insufficient sample complexity, thus having to be appropriately regularized. A common choice is convex ℓ1 plus nuclear norm to regularize the searching process. However, the best estimator performance is not always achieved with these additive convex regularizations, especially when the sample complexity is low. In this paper, we consider a concave additive regularization which does not require the strong irrepresentable condition. We use concave regularization to correct the intrinsic estimation biases from Lasso and nuclear penalty as well. We establish the proximity operators for our concave regularizations, respectively, which induces sparsity and low rankness. In addition, we extend our method to also allow the decomposition of fused structure-sparsity plus low rankness, providing a powerful tool for models with temporal information. Specifically, we develop a nontrivial modified alternating direction method of multipliers with at least local convergence. Finally, we use both synthetic and real data to validate the excellence of our method. In the application of reconstructing two-stage cancer networks, “the Warburg effect” can be revealed directly. PMID:27843485

  18. Gaussian process based modeling and experimental design for sensor calibration in drifting environments.

    PubMed

    Geng, Zongyu; Yang, Feng; Chen, Xi; Wu, Nianqiang

    2015-09-01

    It remains a challenge to accurately calibrate a sensor subject to environmental drift. The calibration task for such a sensor is to quantify the relationship between the sensor's response and its exposure condition, which is specified by not only the analyte concentration but also the environmental factors such as temperature and humidity. This work developed a Gaussian Process (GP)-based procedure for the efficient calibration of sensors in drifting environments. Adopted as the calibration model, GP is not only able to capture the possibly nonlinear relationship between the sensor responses and the various exposure-condition factors, but also able to provide valid statistical inference for uncertainty quantification of the target estimates (e.g., the estimated analyte concentration of an unknown environment). Built on GP's inference ability, an experimental design method was developed to achieve efficient sampling of calibration data in a batch sequential manner. The resulting calibration procedure, which integrates the GP-based modeling and experimental design, was applied on a simulated chemiresistor sensor to demonstrate its effectiveness and its efficiency over the traditional method.

  19. Histogram-based classification with Gaussian mixture modeling for GBM tumor treatment response using ADC map

    NASA Astrophysics Data System (ADS)

    Huo, Jing; Kim, Hyun J.; Pope, Whitney B.; Okada, Kazunori; Alger, Jeffery R.; Wang, Yang; Goldin, Jonathan G.; Brown, Matthew S.

    2009-02-01

    This study applied a Gaussian Mixture Model (GMM) to apparent diffusion coefficient (ADC) histograms to evaluate glioblastoma multiforme (GBM) tumor treatment response using diffusion weighted (DW) MR images. ADC mapping, calculated from DW images, has been shown to reveal changes in the tumor's microenvironment preceding morphologic tumor changes. In this study, we investigated the effectiveness of features that represent changes from pre- and post-treatment tumor ADC histograms to detect treatment response. The main contribution of this work is to model the ADC histogram as the composition of two components, fitted by GMM with expectation maximization (EM) algorithm. For both pre- and post-treatment scans taken 5-7 weeks apart, we obtained the tumor ADC histogram, calculated the two-component features, as well as the other standard histogram-based features, and applied supervised learning for classification. We evaluated our approach with data from 85 patients with GBM under chemotherapy, in which 33 responded and 52 did not respond based on tumor size reduction. We compared AdaBoost and random forests classification algorithms, using ten-fold cross validation, resulting in a best accuracy of 69.41%.

  20. Gaussian functional approximation to 't Hooft's extension of the linear Σ model

    NASA Astrophysics Data System (ADS)

    Nakamura, Issei; Dmitrašinović, V.

    2012-03-01

    We apply a self-consistent relativistic mean-field variational “Gaussian functional” (or optimized one-loop perturbation theory, or Hartree+RPA) approximation to the extended Nf=2 linear σ model with spontaneously and explicitly broken chiral SUR(2)×SUL(2)×UA(1)≡O(4)×O(2) symmetry. We set up the self-consistency, or gap equations that dress up the bare fields with “cactus tree” loop diagrams, and the Bethe-Salpeter equations that provide further dressing with one-loop irreducible diagrams. In a previous publication [V. Dmitrašinović and I. Nakamura, J. Math. Phys. (N.Y.)JMAPAQ0022-2488 44, 2839 (2003).10.1063/1.1576907] we have already shown the ability of this approximation to create composite (i.e., bound and/or resonance) states. With explicit SUR(2)×SUL(2)×UA(1) chiral symmetry breaking first we consider how the UA(1) symmetry induced scalar-pseudoscalar meson mass relation that is known to hold in fermionic chiral models is modified by the bosonic gap equations. Then we solve the gap and Bethe-Salpeter equations numerically and discuss the solutions’ properties and the particle content of the theory. We show that in the strong-coupling regime two, sometimes even three solutions to the η meson channel Bethe-Salpeter equation may coexist.