Sample records for generation force field

  1. QuickFF: A program for a quick and easy derivation of force fields for metal-organic frameworks from ab initio input.

    PubMed

    Vanduyfhuys, Louis; Vandenbrande, Steven; Verstraelen, Toon; Schmid, Rochus; Waroquier, Michel; Van Speybroeck, Veronique

    2015-05-15

    QuickFF is a software package to derive accurate force fields for isolated and complex molecular systems in a quick and easy manner. Apart from its general applicability, the program has been designed to generate force fields for metal-organic frameworks in an automated fashion. The force field parameters for the covalent interaction are derived from ab initio data. The mathematical expression of the covalent energy is kept simple to ensure robustness and to avoid fitting deficiencies as much as possible. The user needs to produce an equilibrium structure and a Hessian matrix for one or more building units. Afterward, a force field is generated for the system using a three-step method implemented in QuickFF. The first two steps of the methodology are designed to minimize correlations among the force field parameters. In the last step, the parameters are refined by imposing the force field parameters to reproduce the ab initio Hessian matrix in Cartesian coordinate space as accurate as possible. The method is applied on a set of 1000 organic molecules to show the easiness of the software protocol. To illustrate its application to metal-organic frameworks (MOFs), QuickFF is used to determine force fields for MIL-53(Al) and MOF-5. For both materials, accurate force fields were already generated in literature but they requested a lot of manual interventions. QuickFF is a tool that can easily be used by anyone with a basic knowledge of performing ab initio calculations. As a result, accurate force fields are generated with minimal effort. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.

  2. Force sensor

    DOEpatents

    Grahn, A.R.

    1993-05-11

    A force sensor and related method for determining force components is described. The force sensor includes a deformable medium having a contact surface against which a force can be applied, a signal generator for generating signals that travel through the deformable medium to the contact surface, a signal receptor for receiving the signal reflected from the contact surface, a generation controller, a reception controller, and a force determination apparatus. The signal generator has one or more signal generation regions for generating the signals. The generation controller selects and activates the signal generation regions. The signal receptor has one or more signal reception regions for receiving signals and for generating detections signals in response thereto. The reception controller selects signal reception regions and detects the detection signals. The force determination apparatus measures signal transit time by timing activation and detection and, optionally, determines force components for selected cross-field intersections. The timer which times by activation and detection can be any means for measuring signal transit time. A cross-field intersection is defined by the overlap of a signal generation region and a signal reception region.

  3. Force sensor

    DOEpatents

    Grahn, Allen R.

    1993-01-01

    A force sensor and related method for determining force components. The force sensor includes a deformable medium having a contact surface against which a force can be applied, a signal generator for generating signals that travel through the deformable medium to the contact surface, a signal receptor for receiving the signal reflected from the contact surface, a generation controller, a reception controller, and a force determination apparatus. The signal generator has one or more signal generation regions for generating the signals. The generation controller selects and activates the signal generation regions. The signal receptor has one or more signal reception regions for receiving signals and for generating detections signals in response thereto. The reception controller selects signal reception regions and detects the detection signals. The force determination apparatus measures signal transit time by timing activation and detection and, optionally, determines force components for selected cross-field intersections. The timer which times by activation and detection can be any means for measuring signal transit time. A cross-field intersection is defined by the overlap of a signal generation region and a signal reception region.

  4. Laser-pulse shape effects on magnetic field generation in underdense plasmas

    NASA Astrophysics Data System (ADS)

    Gopal, Krishna; Raja, Md. Ali; Gupta, Devki Nandan; Avinash, K.; Sharma, Suresh C.

    2018-07-01

    Laser pulse shape effect has been considered to estimate the self-generated magnetic field in laser-plasma interaction. A ponderomotive force based physical mechanism has been proposed to investigate the self-generated magnetic field for different spatial profiles of the laser pulse in inhomogeneous plasmas. The spatially inhomogeneous electric field of a laser pulse imparts a stronger ponderomotive force on plasma electrons. Thus, the stronger ponderomotive force associated with the asymmetric laser pulse generates a stronger magnetic field in comparison to the case of a symmetric laser pulse. Scaling laws for magnetic field strength with the laser and plasma parameters for different shape of the pulse have been suggested. Present study might be helpful to understand the plasma dynamics relevant to the particle trapping and injection in laser-plasma accelerators.

  5. Preface: Special Topic: From Quantum Mechanics to Force Fields.

    PubMed

    Piquemal, Jean-Philip; Jordan, Kenneth D

    2017-10-28

    This Special Topic issue entitled "From Quantum Mechanics to Force Fields" is dedicated to the ongoing efforts of the theoretical chemistry community to develop a new generation of accurate force fields based on data from high-level electronic structure calculations and to develop faster electronic structure methods for testing and designing force fields as well as for carrying out simulations. This issue includes a collection of 35 original research articles that illustrate recent theoretical advances in the field. It provides a timely snapshot of recent developments in the generation of approaches to enable more accurate molecular simulations of processes important in chemistry, physics, biophysics, and materials science.

  6. Preface: Special Topic: From Quantum Mechanics to Force Fields

    NASA Astrophysics Data System (ADS)

    Piquemal, Jean-Philip; Jordan, Kenneth D.

    2017-10-01

    This Special Topic issue entitled "From Quantum Mechanics to Force Fields" is dedicated to the ongoing efforts of the theoretical chemistry community to develop a new generation of accurate force fields based on data from high-level electronic structure calculations and to develop faster electronic structure methods for testing and designing force fields as well as for carrying out simulations. This issue includes a collection of 35 original research articles that illustrate recent theoretical advances in the field. It provides a timely snapshot of recent developments in the generation of approaches to enable more accurate molecular simulations of processes important in chemistry, physics, biophysics, and materials science.

  7. Modulation of local field potential power of the subthalamic nucleus during isometric force generation in patients with Parkinson's disease.

    PubMed

    Florin, E; Dafsari, H S; Reck, C; Barbe, M T; Pauls, K A M; Maarouf, M; Sturm, V; Fink, G R; Timmermann, L

    2013-06-14

    Investigations of local field potentials of the subthalamic nucleus of patients with Parkinson's disease have provided evidence for pathologically exaggerated oscillatory beta-band activity (13-30 Hz) which is amenable to physiological modulation by, e.g., voluntary movement. Previous functional magnetic resonance imaging studies in healthy controls have provided evidence for an increase of subthalamic nucleus blood-oxygenation-level-dependant signal in incremental force generation tasks. However, the modulation of neuronal activity by force generation and its relationship to peripheral feedback remain to be elucidated. We hypothesised that beta-band activity in the subthalamic nucleus is modulated by incremental force generation. Subthalamic nucleus local field potentials were recorded intraoperatively in 13 patients with Parkinson's disease (37 recording sites) during rest and five incremental isometric force generation conditions of the arm with applied loads of 0-400 g (in 100-g increments). Repeated measures analysis of variance (ANOVA) revealed a modulation of local field potential (LFP) power in the upper beta-band (in 24-30 Hz; F(₃.₀₄₂)=4.693, p=0.036) and the gamma-band (in 70-76 Hz; F(₄)=4.116, p=0.036). Granger-causality was computed with the squared partial directed coherence and showed no significant modulation during incremental isometric force generation. Our findings indicate that the upper beta- and gamma-band power of subthalamic nucleus local field potentials are modulated by the physiological task of force generation in patients with Parkinson's disease. This modulation seems to be not an effect of a modulation of peripheral feedback. Copyright © 2013 IBRO. Published by Elsevier Ltd. All rights reserved.

  8. Levitation forces of a bulk YBCO superconductor in gradient varying magnetic fields

    NASA Astrophysics Data System (ADS)

    Jiang, J.; Gong, Y. M.; Wang, G.; Zhou, D. J.; Zhao, L. F.; Zhang, Y.; Zhao, Y.

    2015-09-01

    The levitation forces of a bulk YBCO superconductor in gradient varying high and low magnetic fields generated from a superconducting magnet were investigated. The magnetic field intensity of the superconducting magnet was measured when the exciting current was 90 A. The magnetic field gradient and magnetic force field were both calculated. The YBCO bulk was cooled by liquid nitrogen in field-cooling (FC) and zero-field-cooling (ZFC) condition. The results showed that the levitation forces increased with increasing the magnetic field intensity. Moreover, the levitation forces were more dependent on magnetic field gradient and magnetic force field than magnetic field intensity.

  9. Evaluation of the attractive force of different types of new-generation magnetic attachment systems.

    PubMed

    Akin, Hakan; Coskun, M Emre; Akin, E Gulsah; Ozdemir, A Kemal

    2011-03-01

    Rare earth magnets have been used in prosthodontics, but their tendency for corrosion in the oral cavity and insufficient attractive forces limit long-term clinical application. The purpose of this study was to evaluate the attractive force of different types of new-generation magnetic attachment systems. The attractive force of the neodymium-iron-boron (Nd-Fe-B) and samarium-cobalt (Sm-Co) magnetic attachment systems, including closed-field (Hilop and Hicorex) and open-field (Dyna and Steco) systems, was measured in a universal testing machine (n=5). The data were statistically evaluated with 1-way ANOVA and post hoc Tukey-Kramer multiple comparison test (α=.05). The closed-field systems exhibited greater (P<.001) attractive force than the open-field systems. Moreover, there was a statistically significant difference in attractive force between Nd-Fe-B and Sm-Co magnets (P<.001). The strongest attractive force was found with the Hilop system (9.2 N), and the lowest force was found with the Steco system (2.3 N). The new generation of Nd-Fe-B closed-field magnets, along with improved technology, provides sufficient denture retention for clinical application. Copyright © 2011 The Editorial Council of the Journal of Prosthetic Dentistry. Published by Mosby, Inc. All rights reserved.

  10. Improved atomistic simulation of diffusion and sorption in metal oxides

    NASA Astrophysics Data System (ADS)

    Skouras, E. D.; Burganos, V. N.; Payatakes, A. C.

    2001-01-01

    Gas diffusion and sorption on the surface of metal oxides are investigated using atomistic simulations, that make use of two different force fields for the description of the intramolecular and intermolecular interactions. MD and MC computations are presented and estimates of the mean residence time, Henry's constant, and the heat of adsorption are provided for various common gases (CO, CO2, O2, CH4, Xe), and semiconducting substrates that hold promise for gas sensor applications (SnO2, BaTiO3). Comparison is made between the performance of a simple, first generation force field (Universal) and a more detailed, second generation field (COMPASS) under the same conditions and the same assumptions regarding the generation of the working configurations. It is found that the two force fields yield qualitatively similar results in all cases examined here. However, direct comparison with experimental data reveals that the accuracy of the COMPASS-based computations is not only higher than that of the first generation force field but exceeds even that of published specialized methods, based on ab initio computations.

  11. The influence of an uncertain force environment on reshaping trial-to-trial motor variability.

    PubMed

    Izawa, Jun; Yoshioka, Toshinori; Osu, Rieko

    2014-09-10

    Motor memory is updated to generate ideal movements in a novel environment. When the environment changes every trial randomly, how does the brain incorporate this uncertainty into motor memory? To investigate how the brain adapts to an uncertain environment, we considered a reach adaptation protocol where individuals practiced moving in a force field where a noise was injected. After they had adapted, we measured the trial-to-trial variability in the temporal profiles of the produced hand force. We found that the motor variability was significantly magnified by the adaptation to the random force field. Temporal profiles of the motor variance were significantly dissociable between two different types of random force fields experienced. A model-based analysis suggests that the variability is generated by noise in the gains of the internal model. It further suggests that the trial-to-trial motor variability magnified by the adaptation in a random force field is generated by the uncertainty of the internal model formed in the brain as a result of the adaptation.

  12. Drag and Lift Forces Between a Rotating Conductive Sphere and a Cylindrical Magnet

    NASA Technical Reports Server (NTRS)

    Nurge, Mark A.; Youngquist, Robert C.

    2017-01-01

    Modeling the interaction between a non-uniform magnetic field and a rotating conductive object allows study of the drag force which is used in applications such as eddy current braking and linear induction motors as well as the transition to a repulsive force that is the basis for magnetic levitation systems. Here, we study the interaction between a non-uniform field generated by a cylindrical magnet and a rotating conductive sphere. Each eddy current in the sphere generates a magnetic field which in turn generates another eddy current, eventually feeding back on itself. A two step mathematics process is developed to find a closed form solution in terms of only two eddy currents. However, the complete solution requires decomposition of the magnetic field into a summation of spherical harmonics, making it more suitable for a graduate level electromagnetism lecture or lab. Finally, the forces associated with these currents are calculated and then verified experimentally.

  13. Drag and lift forces between a rotating conductive sphere and a cylindrical magnet

    NASA Astrophysics Data System (ADS)

    Nurge, Mark A.; Youngquist, Robert C.; Starr, Stanley O.

    2018-06-01

    Modeling the interaction between a non-uniform magnetic field and a rotating conductive object provides insight into the drag force, which is used in applications such as eddy current braking and linear induction motors, as well as the transition to a repulsive force, which is the basis for magnetic levitation systems. Here, we study the interaction between a non-uniform field generated by a cylindrical magnet and a rotating conductive sphere. Each eddy current in the sphere generates a magnetic field which in turn generates another eddy current, eventually feeding back on itself. A two-step mathematical process is developed to find a closed-form solution in terms of only three eddy currents. However, the complete solution requires decomposition of the magnetic field into a summation of spherical harmonics, making it more suitable for a graduate-level electromagnetism lecture or lab. Finally, the forces associated with these currents are calculated and then verified experimentally.

  14. Apparatus having reduced mechanical forces for supporting high magnetic fields

    DOEpatents

    Prueitt, Melvin L.; Mueller, Fred M.; Smith, James L.

    1991-01-01

    The present invention identifies several configurations of conducting elements capable of supporting extremely high magnetic fields suitable for plasma confinement, wherein forces experienced by the conducting elements are significantly reduced over those which are present as a result of the generation of such high fields by conventional techniques. It is anticipated that the use of superconducting materials will both permit the attainment of such high fields and further permit such fields to be generated with vastly improved efficiency.

  15. Numerical study of melt flow under the influence of heater-generating magnetic field during directional solidification of silicon ingots

    NASA Astrophysics Data System (ADS)

    Li, Zaoyang; Qi, Xiaofang; Liu, Lijun; Zhou, Genshu

    2018-02-01

    The alternating current (AC) in the resistance heater for generating heating power can induce a magnetic field in the silicon melt during directional solidification (DS) of silicon ingots. We numerically study the influence of such a heater-generating magnetic field on the silicon melt flow and temperature distribution in an industrial DS process. 3D simulations are carried out to calculate the Lorentz force distribution as well as the melt flow and heat transfer in the entire DS furnace. The pattern and intensity of silicon melt flow as well as the temperature distribution are compared for cases with and without Lorentz force. The results show that the Lorentz force induced by the heater-generating magnetic field is mainly distributed near the top and side surfaces of the silicon melt. The melt flow and temperature distribution, especially those in the upper part of the silicon region, can be influenced significantly by the magnetic field.

  16. CHARMM-GUI ligand reader and modeler for CHARMM force field generation of small molecules.

    PubMed

    Kim, Seonghoon; Lee, Jumin; Jo, Sunhwan; Brooks, Charles L; Lee, Hui Sun; Im, Wonpil

    2017-06-05

    Reading ligand structures into any simulation program is often nontrivial and time consuming, especially when the force field parameters and/or structure files of the corresponding molecules are not available. To address this problem, we have developed Ligand Reader & Modeler in CHARMM-GUI. Users can upload ligand structure information in various forms (using PDB ID, ligand ID, SMILES, MOL/MOL2/SDF file, or PDB/mmCIF file), and the uploaded structure is displayed on a sketchpad for verification and further modification. Based on the displayed structure, Ligand Reader & Modeler generates the ligand force field parameters and necessary structure files by searching for the ligand in the CHARMM force field library or using the CHARMM general force field (CGenFF). In addition, users can define chemical substitution sites and draw substituents in each site on the sketchpad to generate a set of combinatorial structure files and corresponding force field parameters for throughput or alchemical free energy simulations. Finally, the output from Ligand Reader & Modeler can be used in other CHARMM-GUI modules to build a protein-ligand simulation system for all supported simulation programs, such as CHARMM, NAMD, GROMACS, AMBER, GENESIS, LAMMPS, Desmond, OpenMM, and CHARMM/OpenMM. Ligand Reader & Modeler is available as a functional module of CHARMM-GUI at http://www.charmm-gui.org/input/ligandrm. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  17. Recent Developments and Applications of the CHARMM force fields

    PubMed Central

    Zhu, Xiao; Lopes, Pedro E.M.; MacKerell, Alexander D.

    2011-01-01

    Empirical force fields commonly used to describe the condensed phase properties of complex systems such as biological macromolecules are continuously being updated. Improvements in quantum mechanical (QM) methods used to generate target data, availability of new experimental target data, incorporation of new classes of compounds and new theoretical developments (eg. polarizable methods) make force-field development a dynamic domain of research. Accordingly, a number of improvements and extensions of the CHARMM force fields have occurred over the years. The objective of the present review is to provide an up-to-date overview of the CHARMM force fields. A limited presentation on the historical aspects of force fields will be given, including underlying methodologies and principles, along with a brief description of the strategies used for parameter development. This is followed by information on the CHARMM additive and polarizable force fields, including examples of recent applications of those force fields. PMID:23066428

  18. Measurement and Numerical Calculation of Force on a Particle in a Strong Acoustic Field Required for Levitation

    NASA Astrophysics Data System (ADS)

    Kozuka, Teruyuki; Yasui, Kyuichi; Tuziuti, Toru; Towata, Atsuya; Lee, Judy; Iida, Yasuo

    2009-07-01

    Using a standing-wave field generated between a sound source and a reflector, it is possible to trap small objects at nodes of the sound pressure distribution in air. In this study, a sound field generated under a flat or concave reflector was studied by both experimental measurement and numerical calculation. The calculated result agrees well with the experimental data. The maximum force generated between a sound source of 25.0 mm diameter and a concave reflector is 0.8 mN in the experiment. A steel ball of 2.0 mm in diameter was levitated in the sound field in air.

  19. Force Balance and Substorm Effects in the Magnetotail

    NASA Technical Reports Server (NTRS)

    Kaufmann, Richard L.; Larson, Douglas J.; Kontodinas, Ioannis D.; Ball, Bryan M.

    1997-01-01

    A model of the quiet time middle magnetotail is developed using a consistent orbit tracing technique. The momentum equation is used to calculate geocentric solar magnetospheric components of the particle and electromagnetic forces throughout the current sheet. Ions generate the dominant x and z force components. Electron and ion forces almost cancel in the y direction because the two species drift earthward at comparable speeds. The force viewpoint is applied to a study of some substorm processes. Generation of the rapid flows seen during substorm injection and bursty bulk flow events implies substantial force imbalances. The formation of a substorm diversion loop is one cause of changes in the magnetic field and therefore in the electromagnetic force. It is found that larger forces are produced when the cross-tail current is diverted to the ionosphere than would be produced if the entire tail current system simply decreased. Plasma is accelerated while the forces are unbalanced resulting in field lines within a diversion loop becoming more dipolar. Field lines become more stretched and the plasma sheet becomes thinner outside a diversion loop. Mechanisms that require thin current sheets to produce current disruption then can create additional diversion loops in the newly thinned regions. This process may be important during multiple expansion substorms and in differentiating pseudoexpansions from full substorms. It is found that the tail field model used here can be generated by a variety of particle distribution functions. However, for a given energy distribution the mixture of particle mirror or reflection points is constrained by the consistency requirement. The study of uniqueness also leads to the development of a technique to select guiding center electrons that will produce charge neutrality all along a flux tube containing nonguiding center ions without the imposition of a parallel electric field.

  20. Apparatus for storing high magnetic fields having reduced mechanical forces and reduced magnetic pollution

    DOEpatents

    Prueitt, Melvin L.; Mueller, Fred M.; Smith, James L.

    1991-01-01

    The present invention identifies several configurations of conducting elements capable of storing extremely high magnetic fields for the purpose of energy storage or for other uses, wherein forces experienced by the conducting elements and the magnetic field pollution produced at locations away from the configuration are both significantly reduced over those which are present as a result of the generation of such high fields by currently proposed techniques. It is anticipated that the use of superconducting materials will both permit the attainment of such high fields and further permit such fields to be generated with vastly improved efficiency.

  1. Apparatus for storing high magnetic fields having reduced mechanical forces and reduced magnetic pollution

    DOEpatents

    Prueitt, M.L.; Mueller, F.M.; Smith, J.L.

    1991-04-09

    The present invention identifies several configurations of conducting elements capable of storing extremely high magnetic fields for the purpose of energy storage or for other uses, wherein forces experienced by the conducting elements and the magnetic field pollution produced at locations away from the configuration are both significantly reduced over those which are present as a result of the generation of such high fields by currently proposed techniques. It is anticipated that the use of superconducting materials will both permit the attainment of such high fields and further permit such fields to be generated with vastly improved efficiency. 15 figures.

  2. Nonequilibrium Tuning of the Thermal Casimir Effect.

    PubMed

    Dean, David S; Lu, Bing-Sui; Maggs, A C; Podgornik, Rudolf

    2016-06-17

    In net-neutral systems correlations between charge fluctuations generate strong attractive thermal Casimir forces and engineering these forces to optimize nanodevice performance is an important challenge. We show how the normal and lateral thermal Casimir forces between two plates containing Brownian charges can be modulated by decorrelating the system through the application of an electric field, which generates a nonequilibrium steady state with a constant current in one or both plates, reducing the ensuing fluctuation-generated normal force while at the same time generating a lateral drag force. This hypothesis is confirmed by detailed numerical simulations as well as an analytical approach based on stochastic density functional theory.

  3. Strong-field dynamo action in rapidly rotating convection with no inertia.

    PubMed

    Hughes, David W; Cattaneo, Fausto

    2016-06-01

    The earth's magnetic field is generated by dynamo action driven by convection in the outer core. For numerical reasons, inertial and viscous forces play an important role in geodynamo models; however, the primary dynamical balance in the earth's core is believed to be between buoyancy, Coriolis, and magnetic forces. The hope has been that by setting the Ekman number to be as small as computationally feasible, an asymptotic regime would be reached in which the correct force balance is achieved. However, recent analyses of geodynamo models suggest that the desired balance has still not yet been attained. Here we adopt a complementary approach consisting of a model of rapidly rotating convection in which inertial forces are neglected from the outset. Within this framework we are able to construct a branch of solutions in which the dynamo generates a strong magnetic field that satisfies the expected force balance. The resulting strongly magnetized convection is dramatically different from the corresponding solutions in which the field is weak.

  4. Controlling dispersion forces between small particles with artificially created random light fields

    PubMed Central

    Brügger, Georges; Froufe-Pérez, Luis S.; Scheffold, Frank; José Sáenz, Juan

    2015-01-01

    Appropriate combinations of laser beams can be used to trap and manipulate small particles with optical tweezers as well as to induce significant optical binding forces between particles. These interaction forces are usually strongly anisotropic depending on the interference landscape of the external fields. This is in contrast with the familiar isotropic, translationally invariant, van der Waals and, in general, Casimir–Lifshitz interactions between neutral bodies arising from random electromagnetic waves generated by equilibrium quantum and thermal fluctuations. Here we show, both theoretically and experimentally, that dispersion forces between small colloidal particles can also be induced and controlled using artificially created fluctuating light fields. Using optical tweezers as a gauge, we present experimental evidence for the predicted isotropic attractive interactions between dielectric microspheres induced by laser-generated, random light fields. These light-induced interactions open a path towards the control of translationally invariant interactions with tuneable strength and range in colloidal systems. PMID:26096622

  5. Macroscopic kinematics of the Hall electric field under influence of carrier magnetic moments

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sakai, Masamichi, E-mail: sakai@fms.saitama-u.ac.jp

    2016-06-15

    The relativistic effect on electromagnetic forces yields two types of forces which depend on the velocity of the relevant particles: (i) the usual Lorentz force exerted on a moving charged particle and (ii) the apparent Lorentz force exerted on a moving magnetic moment. In sharp contrast with type (i), the type (ii) force originates due to the transverse field induced by the Hall effect (HE). This study incorporates both forces into a Drude-type equation with a fully spin-polarized condition to investigate the effects of self-consistency of the source and the resultant fields on the HE. We also examine the self-consistencymore » of the carrier kinematics and electromagnetic dynamics by simultaneously considering the Drude type equation and Maxwell equations at low frequencies. Thus, our approach can predict both the dc and ac characteristics of the HE, demonstrating that the dc current condition solely yields the ordinary HE, while the ac current condition yields generation of both fundamental and second harmonic modes of the HE field. When the magnetostatic field is absent, the simultaneous presence of dc and ac longitudinal currents generates the ac HE that has both fundamental frequency and second harmonic.« less

  6. Nonlinear scalar forcing based on a reaction analogy

    NASA Astrophysics Data System (ADS)

    Daniel, Don; Livescu, Daniel

    2017-11-01

    We present a novel reaction analogy (RA) based forcing method for generating stationary passive scalar fields in incompressible turbulence. The new method can produce more general scalar PDFs (e.g. double-delta) than current methods, while ensuring that scalar fields remain bounded, unlike existent forcing methodologies that can potentially violate naturally existing bounds. Such features are useful for generating initial fields in non-premixed combustion or for studying non-Gaussian scalar turbulence. The RA method mathematically models hypothetical chemical reactions that convert reactants in a mixed state back into its pure unmixed components. Various types of chemical reactions are formulated and the corresponding mathematical expressions derived. For large values of the scalar dissipation rate, the method produces statistically steady double-delta scalar PDFs. Gaussian scalar statistics are recovered for small values of the scalar dissipation rate. In contrast, classical forcing methods consistently produce unimodal Gaussian scalar fields. The ability of the new method to produce fully developed scalar fields is discussed using 2563, 5123, and 10243 periodic box simulations.

  7. Polymer-induced forces at interfaces

    NASA Astrophysics Data System (ADS)

    Rangarajan, Murali

    This dissertation concerns studies of forces generated by confined and physisorbed flexible polymers using lattice mean-field theories, and those generated by confined and clamped semiflexible polymers modeled as slender elastic rods. Lattice mean-field theories have been used in understanding and predicting the behavior of polymeric interfacial systems. In order to efficiently tailor such systems for various applications of interest, one has to understand the forces generated in the interface due to the polymer molecules. The present work examines the abilities and limitations of lattice mean-field theories in predicting the structure of physisorbed polymer layers and the resultant forces. Within the lattice mean-field theory, a definition of normal force of compression as the negative derivative of the partition-function-based excess free energy with surface separation gives misleading results because the theory does not explicitly account for the normal stresses involved in the system. Correct expressions for normal and tangential forces are obtained from a continuum-mechanics-based formulation. Preliminary comparisons with lattice Monte Carlo simulations show that mean-field theories fail to predict significant attractive forces when the surfaces are undersaturated, as one would expect. The corrections to the excluded volume (non-reversal chains) and the mean-field (anisotropic field) approximations improve the predictions of layer structure, but not the forces. Bending of semiflexible polymer chains (elastic rods) is considered for two boundary conditions---where the chain is hinged on both ends and where the chain is clamped on one end and hinged on the other. For the former case, the compressive forces and chain shapes obtained are consistent with the inflexional elastica published by Love. For the latter, multiple and higher-order solutions are observed for the hinged-end position for a given force. Preliminary studies are conducted on actin-based motility of Listeria monocytogenes by treating actin filaments as elastic rods, using the actoclampin model. The results show qualitative agreement with calculations where the filaments are modeled as Hookean springs. The feasibility of the actoclampin model to address long length-scale rotation of Listeria during actin-based motility is addressed.

  8. Extracting the potential-well of a near-field optical trap using the Helmholtz-Hodge decomposition

    NASA Astrophysics Data System (ADS)

    Zaman, Mohammad Asif; Padhy, Punnag; Hansen, Paul C.; Hesselink, Lambertus

    2018-02-01

    The non-conservative nature of the force field generated by a near-field optical trap is analyzed. A plasmonic C-shaped engraving on a gold film is considered as the trap. The force field is calculated using the Maxwell stress tensor method. The Helmholtz-Hodge decomposition is used to extract the conservative and the non-conservative component of the force. Due to the non-negligible non-conservative component, it is found that the conventional approach of extracting the potential by direct integration of the force is not accurate. Despite the non-conservative nature of the force field, it is found that the statistical properties of a trapped nanoparticle can be estimated from the conservative component of the force field alone. Experimental and numerical results are presented to support the claims.

  9. Different elution modes and field programming in gravitational field-flow fractionation. III. Field programming by flow-rate gradient generated by a programmable pump.

    PubMed

    Plocková, J; Chmelík, J

    2001-05-25

    Gravitational field-flow fractionation (GFFF) utilizes the Earth's gravitational field as an external force that causes the settlement of particles towards the channel accumulation wall. Hydrodynamic lift forces oppose this action by elevating particles away from the channel accumulation wall. These two counteracting forces enable modulation of the resulting force field acting on particles in GFFF. In this work, force-field programming based on modulating the magnitude of hydrodynamic lift forces was implemented via changes of flow-rate, which was accomplished by a programmable pump. Several flow-rate gradients (step gradients, linear gradients, parabolic, and combined gradients) were tested and evaluated as tools for optimization of the separation of a silica gel particle mixture. The influence of increasing amount of sample injected on the peak resolution under flow-rate gradient conditions was also investigated. This is the first time that flow-rate gradients have been implemented for programming of the resulting force field acting on particles in GFFF.

  10. Ground Reaction Forces Generated During Rhythmical Squats as a Dynamic Loads of the Structure

    NASA Astrophysics Data System (ADS)

    Pantak, Marek

    2017-10-01

    Dynamic forces generated by moving persons can lead to excessive vibration of the long span, slender and lightweight structure such as floors, stairs, stadium stands and footbridges. These dynamic forces are generated during walking, running, jumping and rhythmical body swaying in vertical or horizontal direction etc. In the paper the mathematical models of the Ground Reaction Forces (GRFs) generated during squats have been presented. Elaborated models was compared to the GRFs measured during laboratory tests carried out by author in wide range of frequency using force platform. Moreover, the GRFs models were evaluated during dynamic numerical analyses and dynamic field tests of the exemplary structure (steel footbridge).

  11. Tailor-made force fields for crystal-structure prediction.

    PubMed

    Neumann, Marcus A

    2008-08-14

    A general procedure is presented to derive a complete set of force-field parameters for flexible molecules in the crystalline state on a case-by-case basis. The force-field parameters are fitted to the electrostatic potential as well as to accurate energies and forces generated by means of a hybrid method that combines solid-state density functional theory (DFT) calculations with an empirical van der Waals correction. All DFT calculations are carried out with the VASP program. The mathematical structure of the force field, the generation of reference data, the choice of the figure of merit, the optimization algorithm, and the parameter-refinement strategy are discussed in detail. The approach is applied to cyclohexane-1,4-dione, a small flexible ring. The tailor-made force field obtained for cyclohexane-1,4-dione is used to search for low-energy crystal packings in all 230 space groups with one molecule per asymmetric unit, and the most stable crystal structures are reoptimized in a second step with the hybrid method. The experimental crystal structure is found as the most stable predicted crystal structure both with the tailor-made force field and the hybrid method. The same methodology has also been applied successfully to the four compounds of the fourth CCDC blind test on crystal-structure prediction. For the five aforementioned compounds, the root-mean-square deviations between lattice energies calculated with the tailor-made force fields and the hybrid method range from 0.024 to 0.053 kcal/mol per atom around an average value of 0.034 kcal/mol per atom.

  12. [Measurements of the flux densities of static magnetic fields generated by two types of dental magnetic attachments and their retentive forces].

    PubMed

    Xu, Chun; Chao, Yong-lie; Du, Li; Yang, Ling

    2004-05-01

    To measure and analyze the flux densities of static magnetic fields generated by two types of commonly used dental magnetic attachments and their retentive forces, and to provide guidance for the clinical application of magnetic attachments. A digital Gaussmeter was used to measure the flux densities of static magnetic fields generated by two types of magnetic attachments, under four circumstances: open-field circuit; closed-field circuit; keeper and magnet slid laterally for a certain distance; and existence of air gap between keeper and magnet. The retentive forces of the magnetic attachments in standard closed-field circuit, with the keeper and magnet sliding laterally for a certain distance or with a certain air gap between keeper and magnet were measured by a tensile testing machine. There were flux leakages under both the open-field circuit and closed-field circuit of the two types of magnetic attachments. The flux densities on the surfaces of MAGNEDISC 800 (MD800) and MAGFIT EX600W (EX600) magnetic attachments under open-field circuit were 275.0 mT and 147.0 mT respectively. The flux leakages under closed-field circuit were smaller than those under open-field circuit. The respective flux densities on the surfaces of MD800 and EX600 magnetic attachments decreased to 11.4 mT and 4.5 mT under closed-field circuit. The flux density around the magnetic attachment decreased as the distance from the surface of the attachment increased. When keeper and magnet slid laterally for a certain distance or when air gap existed between keeper and magnet, the flux leakage increased in comparison with that under closed-field circuit. Under the standard closed-field circuit, the two types of magnetic attachments achieved the largest retentive forces. The retentive forces of MD800 and EX600 magnetic attachments under the standard closed-field circuit were 6.20 N and 4.80 N respectively. The retentive forces decreased with the sliding distance or with the increase of air gap between keeper and magnet. The magnetic attachments have flux leakages. When they are used in patients' oral cavities, if keeper and magnet are not attached accurately, the flux leakage will increase, and at the same time the retentive force will decrease. Therefore the keeper and magnet should be attached accurately in clinical application.

  13. Experimental validation of a distribution theory based analysis of the effect of manufacturing tolerances on permanent magnet synchronous machines

    NASA Astrophysics Data System (ADS)

    Boscaino, V.; Cipriani, G.; Di Dio, V.; Corpora, M.; Curto, D.; Franzitta, V.; Trapanese, M.

    2017-05-01

    An experimental study on the effect of permanent magnet tolerances on the performances of a Tubular Linear Ferrite Motor is presented in this paper. The performances that have been investigated are: cogging force, end effect cogging force and generated thrust. It is demonstrated that: 1) the statistical variability of the magnets introduces harmonics in the spectrum of the cogging force; 2) the value of the end effect cogging force is directly linked to the values of then remanence field of the external magnets placed on the slider; 3) the generated thrust and its statistical distribution depend on the remanence field of the magnets placed on the translator.

  14. An efficient and numerically stable procedure for generating sextic force fields in normal mode coordinates

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sibaev, M.; Crittenden, D. L., E-mail: deborah.crittenden@canterbury.ac.nz

    In this paper, we outline a general, scalable, and black-box approach for calculating high-order strongly coupled force fields in rectilinear normal mode coordinates, based upon constructing low order expansions in curvilinear coordinates with naturally limited mode-mode coupling, and then transforming between coordinate sets analytically. The optimal balance between accuracy and efficiency is achieved by transforming from 3 mode representation quartic force fields in curvilinear normal mode coordinates to 4 mode representation sextic force fields in rectilinear normal modes. Using this reduced mode-representation strategy introduces an error of only 1 cm{sup −1} in fundamental frequencies, on average, across a sizable testmore » set of molecules. We demonstrate that if it is feasible to generate an initial semi-quartic force field in curvilinear normal mode coordinates from ab initio data, then the subsequent coordinate transformation procedure will be relatively fast with modest memory demands. This procedure facilitates solving the nuclear vibrational problem, as all required integrals can be evaluated analytically. Our coordinate transformation code is implemented within the extensible PyPES library program package, at http://sourceforge.net/projects/pypes-lib-ext/.« less

  15. Nonlinear generation of large-scale magnetic fields in forced spherical shell dynamos

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Livermore, P. W.; Hughes, D. W.; Tobias, S. M.

    2010-03-15

    In an earlier paper [P. W. Livermore, D. W. Hughes, and S. M. Tobias, ''The role of helicity and stretching in forced kinematic dynamos in a spherical shell'', Phys. Fluids 19, 057101 (2007)], we considered the kinematic dynamo action resulting from a forced helical flow in a spherical shell. Although mean field electrodynamics suggests that the resulting magnetic field should have a significant mean (axisymmetric) component, we found no evidence for this; the dynamo action was distinctly small scale. Here we extend our investigation into the nonlinear regime in which the magnetic field reacts back on the velocity via themore » Lorentz force. Our main result is somewhat surprising, namely, that nonlinear effects lead to a considerable change in the structure of the magnetic field, its final state having a significant mean component. By investigating the dominant flow-field interactions, we isolate the dynamo mechanism and show schematically how the generation process differs between the kinematic and nonlinear regimes. In addition, we are able to calculate some components of the transport coefficient {alpha} and thus discuss our results within the context of mean field electrodynamics.« less

  16. Rapid parameterization of small molecules using the Force Field Toolkit.

    PubMed

    Mayne, Christopher G; Saam, Jan; Schulten, Klaus; Tajkhorshid, Emad; Gumbart, James C

    2013-12-15

    The inability to rapidly generate accurate and robust parameters for novel chemical matter continues to severely limit the application of molecular dynamics simulations to many biological systems of interest, especially in fields such as drug discovery. Although the release of generalized versions of common classical force fields, for example, General Amber Force Field and CHARMM General Force Field, have posited guidelines for parameterization of small molecules, many technical challenges remain that have hampered their wide-scale extension. The Force Field Toolkit (ffTK), described herein, minimizes common barriers to ligand parameterization through algorithm and method development, automation of tedious and error-prone tasks, and graphical user interface design. Distributed as a VMD plugin, ffTK facilitates the traversal of a clear and organized workflow resulting in a complete set of CHARMM-compatible parameters. A variety of tools are provided to generate quantum mechanical target data, setup multidimensional optimization routines, and analyze parameter performance. Parameters developed for a small test set of molecules using ffTK were comparable to existing CGenFF parameters in their ability to reproduce experimentally measured values for pure-solvent properties (<15% error from experiment) and free energy of solvation (±0.5 kcal/mol from experiment). Copyright © 2013 Wiley Periodicals, Inc.

  17. Optimization of the GBMV2 implicit solvent force field for accurate simulation of protein conformational equilibria.

    PubMed

    Lee, Kuo Hao; Chen, Jianhan

    2017-06-15

    Accurate treatment of solvent environment is critical for reliable simulations of protein conformational equilibria. Implicit treatment of solvation, such as using the generalized Born (GB) class of models arguably provides an optimal balance between computational efficiency and physical accuracy. Yet, GB models are frequently plagued by a tendency to generate overly compact structures. The physical origins of this drawback are relatively well understood, and the key to a balanced implicit solvent protein force field is careful optimization of physical parameters to achieve a sufficient level of cancellation of errors. The latter has been hampered by the difficulty of generating converged conformational ensembles of non-trivial model proteins using the popular replica exchange sampling technique. Here, we leverage improved sampling efficiency of a newly developed multi-scale enhanced sampling technique to re-optimize the generalized-Born with molecular volume (GBMV2) implicit solvent model with the CHARMM36 protein force field. Recursive optimization of key GBMV2 parameters (such as input radii) and protein torsion profiles (via the CMAP torsion cross terms) has led to a more balanced GBMV2 protein force field that recapitulates the structures and stabilities of both helical and β-hairpin model peptides. Importantly, this force field appears to be free of the over-compaction bias, and can generate structural ensembles of several intrinsically disordered proteins of various lengths that seem highly consistent with available experimental data. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  18. CHARMM additive and polarizable force fields for biophysics and computer-aided drug design

    PubMed Central

    Vanommeslaeghe, K.

    2014-01-01

    Background Molecular Mechanics (MM) is the method of choice for computational studies of biomolecular systems owing to its modest computational cost, which makes it possible to routinely perform molecular dynamics (MD) simulations on chemical systems of biophysical and biomedical relevance. Scope of Review As one of the main factors limiting the accuracy of MD results is the empirical force field used, the present paper offers a review of recent developments in the CHARMM additive force field, one of the most popular bimolecular force fields. Additionally, we present a detailed discussion of the CHARMM Drude polarizable force field, anticipating a growth in the importance and utilization of polarizable force fields in the near future. Throughout the discussion emphasis is placed on the force fields’ parametrization philosophy and methodology. Major Conclusions Recent improvements in the CHARMM additive force field are mostly related to newly found weaknesses in the previous generation of additive force fields. Beyond the additive approximation is the newly available CHARMM Drude polarizable force field, which allows for MD simulations of up to 1 microsecond on proteins, DNA, lipids and carbohydrates. General Significance Addressing the limitations ensures the reliability of the new CHARMM36 additive force field for the types of calculations that are presently coming into routine computational reach while the availability of the Drude polarizable force fields offers a model that is an inherently more accurate model of the underlying physical forces driving macromolecular structures and dynamics. PMID:25149274

  19. Assessment of Advanced Logistics Delivery System (ALDS) Launch Systems Concepts

    DTIC Science & Technology

    2004-10-01

    highest force vs. rotor weight required, allows much higher magnetic field generation than the linear induction or linear permanent magnet motors , and...provides the highest force vs. rotor weight required, allows much higher magnetic generation than the linear induction or linear permanent magnet motors , and

  20. Near- and far-field aerodynamics in insect hovering flight: an integrated computational study.

    PubMed

    Aono, Hikaru; Liang, Fuyou; Liu, Hao

    2008-01-01

    We present the first integrative computational fluid dynamics (CFD) study of near- and far-field aerodynamics in insect hovering flight using a biology-inspired, dynamic flight simulator. This simulator, which has been built to encompass multiple mechanisms and principles related to insect flight, is capable of 'flying' an insect on the basis of realistic wing-body morphologies and kinematics. Our CFD study integrates near- and far-field wake dynamics and shows the detailed three-dimensional (3D) near- and far-field vortex flows: a horseshoe-shaped vortex is generated and wraps around the wing in the early down- and upstroke; subsequently, the horseshoe-shaped vortex grows into a doughnut-shaped vortex ring, with an intense jet-stream present in its core, forming the downwash; and eventually, the doughnut-shaped vortex rings of the wing pair break up into two circular vortex rings in the wake. The computed aerodynamic forces show reasonable agreement with experimental results in terms of both the mean force (vertical, horizontal and sideslip forces) and the time course over one stroke cycle (lift and drag forces). A large amount of lift force (approximately 62% of total lift force generated over a full wingbeat cycle) is generated during the upstroke, most likely due to the presence of intensive and stable, leading-edge vortices (LEVs) and wing tip vortices (TVs); and correspondingly, a much stronger downwash is observed compared to the downstroke. We also estimated hovering energetics based on the computed aerodynamic and inertial torques, and powers.

  1. Flow field of flexible flapping wings

    NASA Astrophysics Data System (ADS)

    Sallstrom, Erik

    The agility and maneuverability of natural fliers would be desirable to incorporate into engineered micro air vehicles (MAVs). However, there is still much for engineers to learn about flapping flight in order to understand how such vehicles can be built for efficient flying. The goal of this study is to develop a methodology for capturing high quality flow field data around flexible flapping wings in a hover environment and to interpret it to gain a better understanding of how aerodynamic forces are generated. The flow field data was captured using particle image velocimetry (PIV) and required that measurements be taken around a repeatable flapping motion to obtain phase-averaged data that could be studied throughout the flapping cycle. Therefore, the study includes the development of flapping devices with a simple repeatable single degree of freedom flapping motion. The acquired flow field data has been examined qualitatively and quantitatively to investigate the mechanisms behind force production in hovering flight and to relate it to observations in previous research. Specifically, the flow fields have been investigated around a rigid wing and several carbon fiber reinforced flexible membrane wings. Throughout the whole study the wings were actuated with either a sinusoidal or a semi-linear flapping motion. The semi-linear flapping motion holds the commanded angular velocity nearly constant through half of each half-stroke while the sinusoidal motion is always either accelerating or decelerating. The flow fields were investigated by examining vorticity and vortex structures, using the Q criterion as the definition for the latter, in two and three dimensions. The measurements were combined with wing deflection measurements to demonstrate some of the key links in how the fluid-structure interactions generated aerodynamic forces. The flow fields were also used to calculate the forces generated by the flapping wings using momentum balance methods which yielded details of where along the wing the forces were generated. As expected, these results indicated that the spanwise location of where the forces were generated depended upon the wings membrane material and reinforcement pattern, but in general it was in the outer third of the wing. (Full text of this dissertation may be available via the University of Florida Libraries web site. Please check http://www.uflib.ufl.edu/etd.html)

  2. Dynamo action in stratified convection with overshoot

    NASA Technical Reports Server (NTRS)

    Nordlund, Ake; Brandenburg, Axel; Jennings, Richard L.; Rieutord, Michel; Ruokolainen, Juha; Stein, Robert F.; Tuominen, Ilkka

    1992-01-01

    Results are presented from direct simulations of turbulent compressible hydromagnetic convection above a stable overshoot layer. Spontaneous dynamo action occurs followed by saturation, with most of the generated magnetic field appearing as coherent flux tubes in the vicinity of strong downdrafts, where both the generation and destruction of magnetic field is most vigorous. Whether or not this field is amplified depends on the sizes of the magnetic Reynolds and magnetic Prandtl numbers. Joule dissipation is balanced mainly by the work done against the magnetic curvature force. It is this curvature force which is also responsible for the saturation of the dynamo.

  3. Hall devices improve electric motor efficiency

    NASA Technical Reports Server (NTRS)

    Haeussermann, W.

    1979-01-01

    Efficiency of electric motors and generators is reduced by radial magnetic forces created by symmetric fields within device. Forces are sensed and counteracted by Hall devices on excitation or control windings. Hall generators directly measure and provide compensating control of anu asymmetry, eliminating additional measurements needed for calibration feedback control loop.

  4. CHARMM additive and polarizable force fields for biophysics and computer-aided drug design.

    PubMed

    Vanommeslaeghe, K; MacKerell, A D

    2015-05-01

    Molecular Mechanics (MM) is the method of choice for computational studies of biomolecular systems owing to its modest computational cost, which makes it possible to routinely perform molecular dynamics (MD) simulations on chemical systems of biophysical and biomedical relevance. As one of the main factors limiting the accuracy of MD results is the empirical force field used, the present paper offers a review of recent developments in the CHARMM additive force field, one of the most popular biomolecular force fields. Additionally, we present a detailed discussion of the CHARMM Drude polarizable force field, anticipating a growth in the importance and utilization of polarizable force fields in the near future. Throughout the discussion emphasis is placed on the force fields' parametrization philosophy and methodology. Recent improvements in the CHARMM additive force field are mostly related to newly found weaknesses in the previous generation of additive force fields. Beyond the additive approximation is the newly available CHARMM Drude polarizable force field, which allows for MD simulations of up to 1μs on proteins, DNA, lipids and carbohydrates. Addressing the limitations ensures the reliability of the new CHARMM36 additive force field for the types of calculations that are presently coming into routine computational reach while the availability of the Drude polarizable force fields offers an inherently more accurate model of the underlying physical forces driving macromolecular structures and dynamics. This article is part of a Special Issue entitled "Recent developments of molecular dynamics". Copyright © 2014 Elsevier B.V. All rights reserved.

  5. Magnetic Field Design for a Strongly Improved PHALL Thruster

    NASA Astrophysics Data System (ADS)

    Martins, Alexandre A.; Rodrigo, Miranda; Ferreira, José Leonardo

    2017-10-01

    In this article, we are going to go through some steps that we took in the refining of engineering work related to the development of a permanent magnet Hall thruster. The use of permanent magnets in these thrusters is mainly related to the decrease of used power for propulsion, especially important for low power thrusters as for micro-satellites. The advantage of our chosen configuration is that the magnetic field can be used either perpendicular or parallel to the thruster channel walls, whereas in the last case the generated erosion forces are strongly reduced by at least three orders of magnitude. We are going to show how each magnetic field configuration affects the generated plasma and consequently the generated propulsion force and efficiency.

  6. Force Field for Water Based on Neural Network.

    PubMed

    Wang, Hao; Yang, Weitao

    2018-05-18

    We developed a novel neural network based force field for water based on training with high level ab initio theory. The force field was built based on electrostatically embedded many-body expansion method truncated at binary interactions. Many-body expansion method is a common strategy to partition the total Hamiltonian of large systems into a hierarchy of few-body terms. Neural networks were trained to represent electrostatically embedded one-body and two-body interactions, which require as input only one and two water molecule calculations at the level of ab initio electronic structure method CCSD/aug-cc-pVDZ embedded in the molecular mechanics water environment, making it efficient as a general force field construction approach. Structural and dynamic properties of liquid water calculated with our force field show good agreement with experimental results. We constructed two sets of neural network based force fields: non-polarizable and polarizable force fields. Simulation results show that the non-polarizable force field using fixed TIP3P charges has already behaved well, since polarization effects and many-body effects are implicitly included due to the electrostatic embedding scheme. Our results demonstrate that the electrostatically embedded many-body expansion combined with neural network provides a promising and systematic way to build the next generation force fields at high accuracy and low computational costs, especially for large systems.

  7. Wiggler magnetic field assisted third harmonic generation in expanding clusters

    NASA Astrophysics Data System (ADS)

    Vij, Shivani

    2018-04-01

    A simple theoretical model is constructed to study the wiggler magnetic field assisted third harmonic generation of intense short pulse laser in a cluster in its expanding phase. The ponderomotive force of laser causes density perturbations in cluster electron density which couples with wiggler magnetic field to produce a nonlinear current that generates transverse third harmonic. An intense short pulse laser propagating through a gas embedded with atomic clusters, converts it into hot plasma balls via tunnel ionization. Initially, the electron plasma frequency inside the clusters ω pe > \\sqrt{3}{ω }1 (with ω 1 being the frequency of the laser). As the cluster expands under Coulomb force and hydrodynamic pressure, ω pe decreases to \\sqrt{3}{ω }1. At this time, there is resonant enhancement in the efficiency of the third harmonic generation. The efficiency of third harmonic generation is enhanced due to cluster plasmon resonance and by phase matching due to wiggler magnetic field. The effect of cluster size on the expansion rate is studied to observe that the clusters of different radii would expand differently. The impact of laser intensity and wiggler magnetic field on the efficiency of third harmonic generation is also explored.

  8. Alfvenic Generation of Field-Aligned Currents and Displacement Currents in the M-I Coupling System and the Formation of Discrete Auroral Arcs

    NASA Astrophysics Data System (ADS)

    Song, Y.; Lysak, R. L.

    2016-12-01

    In previous theories (e.g., Hasegawa and Sato, 1979; Sato and Iijima, 1979; Vasyliunas, 1984), field-aligned current (FAC) generation is derived from current continuity assumption plus the force balance between the Lorentz force and other forces in the MHD momentum equation. These theories suggest that the FAC is generated by other forces, such as the inertia and/or pressure gradients. In fact, the FAC cannot be generated by these forces. From Maxwell's equations, FAC generation is associated with enhanced sheared magnetic fields and free magnetic energy where a dynamo action and Alfven waves are needed to generate and transport free magnetic energy. It is obvious that the mechanism of FAC generation cannot be given by analyzing a local force balance. We propose that FACs are generated by Alfvenic interactions in the M-I coupling driven system. From a full set of the dynamical equations, we have found that the generation of the total FAC (J||total ) is associated with spatial gradients of the parallel vorticity, where J||total=J||+J||D, and J||D=(1/4∏)(∂E||/∂t) is the displacement current, which describes E|| generation (Song and Lysak, 2006). The J||total generation is a dynamo process associated with the increase of the azimuthal magnetic flux caused by the axial torque acting on FAC flux tubes. Although the magnitude of the J||D is often very small relative to J||, neglecting this term, we cannot find the mechanism of the E|| generation. When the plasma density is low J||D becomes important relative to the current. We will demonstrate how the generation of E|| and the formation of auroral arcs can redistribute perpendicular mechanical and magnetic stresses which can cause a sudden and violent tail energy release and enhance the total FAC leading to the substorm auroral poleward expansion. We will also show how the nonlinear interaction of incident and reflected Alfven wave packets in the auroral acceleration region can produce quasi-stationary non-propagating electromagnetic plasma structures, such as Alfvenic double layers. These structures will sustain the J||D and can constitute powerful high energy particle accelerators, where electromagnetic energy can be efficiently converted to the particle energy.

  9. ForceGen 3D structure and conformer generation: from small lead-like molecules to macrocyclic drugs

    NASA Astrophysics Data System (ADS)

    Cleves, Ann E.; Jain, Ajay N.

    2017-05-01

    We introduce the ForceGen method for 3D structure generation and conformer elaboration of drug-like small molecules. ForceGen is novel, avoiding use of distance geometry, molecular templates, or simulation-oriented stochastic sampling. The method is primarily driven by the molecular force field, implemented using an extension of MMFF94s and a partial charge estimator based on electronegativity-equalization. The force field is coupled to algorithms for direct sampling of realistic physical movements made by small molecules. Results are presented on a standard benchmark from the Cambridge Crystallographic Database of 480 drug-like small molecules, including full structure generation from SMILES strings. Reproduction of protein-bound crystallographic ligand poses is demonstrated on four carefully curated data sets: the ConfGen Set (667 ligands), the PINC cross-docking benchmark (1062 ligands), a large set of macrocyclic ligands (182 total with typical ring sizes of 12-23 atoms), and a commonly used benchmark for evaluating macrocycle conformer generation (30 ligands total). Results compare favorably to alternative methods, and performance on macrocyclic compounds approaches that observed on non-macrocycles while yielding a roughly 100-fold speed improvement over alternative MD-based methods with comparable performance.

  10. Method and apparatus for removal of gaseous, liquid and particulate contaminants from molten metals

    DOEpatents

    Hobson, D.O.; Alexeff, I.; Sikka, V.K.

    1987-08-10

    Method and apparatus for removal of nonelectrically-conducting gaseous, liquid, and particulate contaminants from molten metal compositions by applying a force thereto. The force (commonly referred to as the Lorentz Force) exerted by simultaneous application of an electric field and a magnetic field on a molten conductor causes an increase, in the same direction as the force, in the apparent specific gravity thereof, but does not affect the nonconducting materials. This difference in apparent densities cause the nonconducting materials to ''float'' in the opposite direction from the Lorentz Force at a rapid rate. Means are further provided for removal of the contaminants and prevention of stirring due to rotational forces generated by the applied fields. 6 figs.

  11. Method and apparatus for removal of gaseous, liquid and particulate contaminants from molten metals

    DOEpatents

    Hobson, David O.; Alexeff, Igor; Sikka, Vinod K.

    1988-01-01

    Method and apparatus for removal of nonelectrically-conducting gaseous, liquid, and particulate contaminants from molten metal compositions by applying a force thereto. The force (commonly referred to as the Lorentz Force) exerted by simultaneous application of an electric field and a magnetic field on a molten conductor causes an increase, in the same direction as the force, in the apparent specific gravity thereof, but does not affect the nonconducting materials. This difference in apparent densities cause the nonconducting materials to "float" in the opposite direction from the Lorentz Force at a rapid rate. Means are further provided for removal of the contaminants and prevention of stirring due to rotational forces generated by the applied fields.

  12. Magnetic Nanotweezers for Interrogating Biological Processes in Space and Time.

    PubMed

    Kim, Ji-Wook; Jeong, Hee-Kyung; Southard, Kaden M; Jun, Young-Wook; Cheon, Jinwoo

    2018-04-17

    The ability to sense and manipulate the state of biological systems has been extensively advanced during the past decade with the help of recent developments in physical tools. Unlike standard genetic and pharmacological perturbation techniques-knockdown, overexpression, small molecule inhibition-that provide a basic on/off switching capability, these physical tools provide the capacity to control the spatial, temporal, and mechanical properties of the biological targets. Among the various physical cues, magnetism offers distinct advantages over light or electricity. Magnetic fields freely penetrate biological tissues and are already used for clinical applications. As one of the unique features, magnetic fields can be transformed into mechanical stimuli which can serve as a cue in regulating biological processes. However, their biological applications have been limited due to a lack of high-performance magnetism-to-mechanical force transducers with advanced spatiotemporal capabilities. In this Account, we present recent developments in magnetic nanotweezers (MNTs) as a useful tool for interrogating the spatiotemporal control of cells in living tissue. MNTs are composed of force-generating magnetic nanoparticles and field generators. Through proper design and the integration of individual components, MNTs deliver controlled mechanical stimulation to targeted biomolecules at any desired space and time. We first discuss about MNT configuration with different force-stimulation modes. By modulating geometry of the magnetic field generator, MNTs exert pulling, dipole-dipole attraction, and rotational forces to the target specifically and quantitatively. We discuss the key physical parameters determining force magnitude, which include magnetic field strength, magnetic field gradient, magnetic moment of the magnetic particle, as well as distance between the field generator and the particle. MNTs also can be used over a wide range of biological time scales. By simply adjusting the amplitude and phase of the applied current, MNTs based on electromagnets allow for dynamic control of the magnetic field from microseconds to hours. Chemical design and the nanoscale effects of magnetic particles are also essential for optimizing MNT performance. We discuss key strategies to develop magnetic nanoparticles with improved force-generation capabilities with a particular focus on the effects of size, shape, and composition of the nanoparticles. We then introduce various strategies and design considerations for target-specific biomechanical stimulations with MNTs. One-to-one particle-receptor engagement for delivering a defined force to the targeted receptor and the small size of the nanoparticles are important. Finally, we demonstrate the utility of MNTs for manipulating biological functions and activities with various spatial (single molecule/cell to organisms) and temporal resolution (microseconds to days). MNTs have the potential to be utilized in many exciting applications across diverse biological systems spanning from fundamental biology investigations of spatial and mechanical signaling dynamics at the single-cell and systems levels to in vivo therapeutic applications.

  13. Optimization of classical nonpolarizable force fields for OH(-) and H3O(+).

    PubMed

    Bonthuis, Douwe Jan; Mamatkulov, Shavkat I; Netz, Roland R

    2016-03-14

    We optimize force fields for H3O(+) and OH(-) that reproduce the experimental solvation free energies and the activities of H3O(+) Cl(-) and Na(+) OH(-) solutions up to concentrations of 1.5 mol/l. The force fields are optimized with respect to the partial charge on the hydrogen atoms and the Lennard-Jones parameters of the oxygen atoms. Remarkably, the partial charge on the hydrogen atom of the optimized H3O(+) force field is 0.8 ± 0.1|e|--significantly higher than the value typically used for nonpolarizable water models and H3O(+) force fields. In contrast, the optimal partial charge on the hydrogen atom of OH(-) turns out to be zero. Standard combination rules can be used for H3O(+) Cl(-) solutions, while for Na(+) OH(-) solutions, we need to significantly increase the effective anion-cation Lennard-Jones radius. While highlighting the importance of intramolecular electrostatics, our results show that it is possible to generate thermodynamically consistent force fields without using atomic polarizability.

  14. Bespoke optical springs and passive force clamps from shaped dielectric particles

    NASA Astrophysics Data System (ADS)

    Simpson, S. H.; Phillips, D. B.; Carberry, D. M.; Hanna, S.

    2013-09-01

    By moulding optical fields, holographic optical tweezers are able to generate structured force fields with magnitudes and length scales of great utility for experiments in soft matter and biological physics. It has recently been noted that optically induced force fields are determined not only by the incident optical field, but by the shape and composition of the particles involved [Gluckstad J. Optical manipulation: sculpting the object. Nat Photonics 2011;5:7-8]. Indeed, there are desirable but simple attributes of a force field, such as orientational control, that cannot be introduced by sculpting optical fields alone. With this insight in mind, we show, theoretically, how relationships between force and displacement can be controlled by optimizing particle shapes. We exhibit a constant force optical spring, made from a tapered microrod and discuss methods by which it could be fabricated. In addition, we investigate the optical analogue of streamlining, and show how objects can be shaped so as to reduce the effects of radiation pressure, and hence switch from non-trapping to trapping regimes.

  15. Manipulation of dielectric Rayleigh particles using highly focused elliptically polarized vector fields.

    PubMed

    Gu, Bing; Xu, Danfeng; Rui, Guanghao; Lian, Meng; Cui, Yiping; Zhan, Qiwen

    2015-09-20

    Generation of vectorial optical fields with arbitrary polarization distribution is of great interest in areas where exotic optical fields are desired. In this work, we experimentally demonstrate the versatile generation of linearly polarized vector fields, elliptically polarized vector fields, and circularly polarized vortex beams through introducing attenuators in a common-path interferometer. By means of Richards-Wolf vectorial diffraction method, the characteristics of the highly focused elliptically polarized vector fields are studied. The optical force and torque on a dielectric Rayleigh particle produced by these tightly focused vector fields are calculated and exploited for the stable trapping of dielectric Rayleigh particles. It is shown that the additional degree of freedom provided by the elliptically polarized vector field allows one to control the spatial structure of polarization, to engineer the focusing field, and to tailor the optical force and torque on a dielectric Rayleigh particle.

  16. Principal Component Analysis of Lipid Molecule Conformational Changes in Molecular Dynamics Simulations.

    PubMed

    Buslaev, Pavel; Gordeliy, Valentin; Grudinin, Sergei; Gushchin, Ivan

    2016-03-08

    Molecular dynamics simulations of lipid bilayers are ubiquitous nowadays. Usually, either global properties of the bilayer or some particular characteristics of each lipid molecule are evaluated in such simulations, but the structural properties of the molecules as a whole are rarely studied. Here, we show how a comprehensive quantitative description of conformational space and dynamics of a single lipid molecule can be achieved via the principal component analysis (PCA). We illustrate the approach by analyzing and comparing simulations of DOPC bilayers obtained using eight different force fields: all-atom generalized AMBER, CHARMM27, CHARMM36, Lipid14, and Slipids and united-atom Berger, GROMOS43A1-S3, and GROMOS54A7. Similarly to proteins, most of the structural variance of a lipid molecule can be described by only a few principal components. These major components are similar in different simulations, although there are notable distinctions between the older and newer force fields and between the all-atom and united-atom force fields. The DOPC molecules in the simulations generally equilibrate on the time scales of tens to hundreds of nanoseconds. The equilibration is the slowest in the GAFF simulation and the fastest in the Slipids simulation. Somewhat unexpectedly, the equilibration in the united-atom force fields is generally slower than in the all-atom force fields. Overall, there is a clear separation between the more variable previous generation force fields and significantly more similar new generation force fields (CHARMM36, Lipid14, Slipids). We expect that the presented approaches will be useful for quantitative analysis of conformations and dynamics of individual lipid molecules in other simulations of lipid bilayers.

  17. Aeroacoustics. [analysis of properties of sound generated by aerodynamic forces

    NASA Technical Reports Server (NTRS)

    Goldstein, M., E.

    1974-01-01

    An analysis was conducted to determine the properties of sound generated by aerodynamic forces or motions originating in a flow, such as the unsteady aerodynamic forces on propellers or by turbulent flows around an aircraft. The acoustics of moving media are reviewed and mathematical models are developed. Lighthill's acoustic analogy and the application to turbulent flows are analyzed. The effects of solid boundaries are calculated. Theories based on the solution of linearized vorticity and acoustic field equations are explained. The effects of nonuniform mean flow on the generation of sound are reported.

  18. Thermal Motion and Forced Migration of Colloidal Particles Generate Hydrostatic Pressure in Solvent

    PubMed Central

    Hammel, H. T.; Scholander, P. F.

    1973-01-01

    A colloidal solution of ferrite particles in an osmometer has been used to demonstrate that the property that propels water across the semipermeable membrane is the decrease in hydrostatic pressure in the water of the solution. A magnetic field gradient directed so as to force the ferrite particles away from the semipermeable membrane of the osmometer and toward the free surface of the solution enhanced the colloidal osmotic pressure. The enhancement of this pressure was always exactly equal to the augmentation of the pressure as measured by the outward force of the particles, against the area of the free surface. Contrariwise, directing the magnetic field gradient so as to force the ferrite particles away from the free surface and toward the semipermeable membrane diminished the colloidal osmotic pressure of the solution. For a sufficiently forceful field gradient, the initial colloidal osmotic pressure could be negative, followed by an equilibrium pressure approaching zero regardless of the force of the particles against the membrane. Thus, the osmotic pressure of a solution is to be attributed to the pressure in the solvent generated in opposition to the pressure of the solute particles caused by their interaction with the free surface (Brownian motion and/or an external field force), or by their viscous shear when they migrate through the solvent, or both. PMID:16592046

  19. Generation of large-scale density fluctuations by buoyancy

    NASA Technical Reports Server (NTRS)

    Chasnov, J. R.; Rogallo, R. S.

    1990-01-01

    The generation of fluid motion from a state of rest by buoyancy forces acting on a homogeneous isotropic small-scale density field is considered. Nonlinear interactions between the generated fluid motion and the initial isotropic small-scale density field are found to create an anisotropic large-scale density field with spectrum proportional to kappa(exp 4). This large-scale density field is observed to result in an increasing Reynolds number of the fluid turbulence in its final period of decay.

  20. Combining configurational energies and forces for molecular force field optimization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vlcek, Lukas; Sun, Weiwei; Kent, Paul R. C.

    While quantum chemical simulations have been increasingly used as an invaluable source of information for atomistic model development, the high computational expenses typically associated with these techniques often limit thorough sampling of the systems of interest. It is therefore of great practical importance to use all available information as efficiently as possible, and in a way that allows for consistent addition of constraints that may be provided by macroscopic experiments. We propose a simple approach that combines information from configurational energies and forces generated in a molecular dynamics simulation to increase the effective number of samples. Subsequently, this information ismore » used to optimize a molecular force field by minimizing the statistical distance similarity metric. We also illustrate the methodology on an example of a trajectory of configurations generated in equilibrium molecular dynamics simulations of argon and water and compare the results with those based on the force matching method.« less

  1. Combining configurational energies and forces for molecular force field optimization

    DOE PAGES

    Vlcek, Lukas; Sun, Weiwei; Kent, Paul R. C.

    2017-07-21

    While quantum chemical simulations have been increasingly used as an invaluable source of information for atomistic model development, the high computational expenses typically associated with these techniques often limit thorough sampling of the systems of interest. It is therefore of great practical importance to use all available information as efficiently as possible, and in a way that allows for consistent addition of constraints that may be provided by macroscopic experiments. We propose a simple approach that combines information from configurational energies and forces generated in a molecular dynamics simulation to increase the effective number of samples. Subsequently, this information ismore » used to optimize a molecular force field by minimizing the statistical distance similarity metric. We also illustrate the methodology on an example of a trajectory of configurations generated in equilibrium molecular dynamics simulations of argon and water and compare the results with those based on the force matching method.« less

  2. Vacuum Fluctuation Force on a Rigid Casimir Cavity in de Sitter and Schwarzschild-De Sitter Space-Time

    NASA Astrophysics Data System (ADS)

    Chen, Xiang

    2012-11-01

    We investigate the net force on a rigid Casimir cavity generated by vacuum fluctuations of electromagnetic field in three cases: de Sitter space-time, de Sitter space-time with weak gravitational field and Schwarzschild-de Sitter space-time. In de Sitter space-time the resulting net force follows the square inverse law but unfortunately it is too weak to be measurable due to the large universe radius. By introducing a weak gravitational field into the de Sitter space-time, we find that the net force can now be split into two parts, one is the gravitational force due to the induced effective mass between the two plates and the other one is generated by the metric structure of de Sitter space-time. In order to investigate the vacuum fluctuation force on the rigid cavity under strong gravitational field, we perform a similar analysis in Schwarzschild-de Sitter space-time and results are obtained in three different limits. The most interesting one is when the cavity gets closer to the horizon of a blackhole, square inverse law is recovered and the repulsive force due to negative energy/mass of the cavity now has an observable strength. More importantly the force changes from being repulsive to attractive when the cavity crosses the event horizon, so that the energy/mass of the cavity switches the sign, which suggests the unusual time direction inside the event horizon.

  3. Force sensor using changes in magnetic flux

    NASA Technical Reports Server (NTRS)

    Pickens, Herman L. (Inventor); Richard, James A. (Inventor)

    2012-01-01

    A force sensor includes a magnetostrictive material and a magnetic field generator positioned in proximity thereto. A magnetic field is induced in and surrounding the magnetostrictive material such that lines of magnetic flux pass through the magnetostrictive material. A sensor positioned in the vicinity of the magnetostrictive material measures changes in one of flux angle and flux density when the magnetostrictive material experiences an applied force that is aligned with the lines of magnetic flux.

  4. Study of intracranial pressure in human brain during transcranial magnetic stimulation.

    PubMed

    Honrath, Marc; Sabouni, Abas

    2015-01-01

    This paper presents the results of cranial force in human brain due to electromagnetic pulse during transcranial magnetic stimulation. To model the force in a realistic brain, we used three dimensional magnetic resonance image of the 26 years old female subject. Simulation results show that during TMS procedure, there is a small force generated within the cranial tissue layers along with a torque value in different layers of brain tissues. The force depends on the magnitude of the magnetic field generated by the TMS coil.

  5. Driving Force of Plasma Bullet in Atmospheric-Pressure Plasma

    NASA Astrophysics Data System (ADS)

    Yambe, Kiyoyuki; Masuda, Seiya; Kondo, Shoma

    2018-06-01

    When plasma is generated by applying high-voltage alternating current (AC), the driving force of the temporally and spatially varying electric field is applied to the plasma. The strength of the driving force of the plasma at each spatial position is different because the electrons constituting the atmospheric-pressure nonequilibrium (cold) plasma move at a high speed in space. If the force applied to the plasma is accelerated only by the driving force, the plasma will be accelerated infinitely. The equilibrium between the driving force and the restricting force due to the collision between the plasma and neutral particles determines the inertial force and the drift velocity of the plasma. Consequently, the drift velocity depends on the strength of the time-averaged AC electric field. The pressure applied by the AC electric field equilibrates with the plasma pressure. From the law of conservation of energy, the pressure equilibrium is maintained by varying the drift velocity of the plasma.

  6. New measuring system for the distribution of a magnetic force by using an optical fiber

    NASA Astrophysics Data System (ADS)

    Ishigaki, H.; Oya, T.; Itoh, M.; Hida, A.; Iwata, K.

    1993-01-01

    A new measuring system using an optical fiber and a position sensing photodetector was developed to measure a three-dimensional distribution of a magnetic force. A steel ball attached to a cantilever made of an optical fiber generated force in a magnetic field. The displacement of the ball due to the force was detected by a position-sensing photodetector with the capability of detecting two-directional coordinates of the position. By scanning the sensing system in a magnetic field, we obtained distributions of two-directional component of the magnetic force vector. The component represents the gradient of a squared magnetic field. The usefulness of the system for measuring the magnetic field distribution in a narrow clearance and for evaluating superconducting machine components such as magnetic bearings was verified experimentally.

  7. Electromagnetic panel deployment and retraction using the geomagnetic field in LEO satellite missions

    NASA Astrophysics Data System (ADS)

    Inamori, Takaya; Sugawara, Yoshiki; Satou, Yasutaka

    2015-12-01

    Increasingly, spacecraft are installed with large-area structures that are extended and deployed post-launch. These extensible structures have been applied in several missions for power generation, thermal radiation, and solar propulsion. Here, we propose a deployment and retraction method using the electromagnetic force generated when the geomagnetic field interacts with electric current flowing on extensible panels. The panels are installed on a satellite in low Earth orbit. Specifically, electrical wires placed on the extensible panels generate magnetic moments, which interfere with the geomagnetic field. The resulting repulsive and retraction forces enable panel deployment and retraction. In the proposed method, a satellite realizes structural deployment using simple electrical wires. Furthermore, the satellite can achieve not only deployment but also retraction for avoiding damage from space debris and for agile attitude maneuvers. Moreover, because the proposed method realizes quasi-static deployment and the retraction of panels by electromagnetic forces, low impulsive force is exerted on fragile panels. The electrical wires can also be used to detect the panel deployment and retraction and generate a large magnetic moment for attitude control. The proposed method was assessed in numerical simulations based on multibody dynamics. Simulation results shows that a small cubic satellite with a wire current of 25 AT deployed 4 panels (20 cm × 20 cm) in 500 s and retracted 4 panels in 100 s.

  8. Experimental study on inter-particle acoustic forces.

    PubMed

    Garcia-Sabaté, Anna; Castro, Angélica; Hoyos, Mauricio; González-Cinca, Ricard

    2014-03-01

    A method for the experimental measurement of inter-particle forces (secondary Bjerknes force) generated by the action of an acoustic field in a resonator micro-channel is presented. The acoustic radiation force created by an ultrasonic standing wave moves suspended particles towards the pressure nodes and the acoustic pressure induces particle volume oscillations. Once particles are in the levitation plane, transverse and secondary Bjerknes forces become important. Experiments were carried out in a resonator filled with a suspension composed of water and latex particles of different size (5-15 μm) at different concentrations. Ultrasound was generated by means of a 2.5 MHz nominal frequency transducer. For the first time the acoustic force generated by oscillating particles acting on other particles has been measured, and the critical interaction distance in various cases has been determined. Inter-particle forces on the order of 10(-14) N have been measured by using this method.

  9. Effect of Position- and Velocity-Dependent Forces on Reaching Movements at Different Speeds

    PubMed Central

    Summa, Susanna; Casadio, Maura; Sanguineti, Vittorio

    2016-01-01

    The speed of voluntary movements is determined by the conflicting needs of maximizing accuracy and minimizing mechanical effort. Dynamic perturbations, e.g., force fields, may be used to manipulate movements in order to investigate these mechanisms. Here, we focus on how the presence of position- and velocity-dependent force fields affects the relation between speed and accuracy during hand reaching movements. Participants were instructed to perform reaching movements under visual control in two directions, corresponding to either low or high arm inertia. The subjects were required to maintain four different movement durations (very slow, slow, fast, very fast). The experimental protocol included three phases: (i) familiarization—the robot generated no force; (ii) force field—the robot generated a force; and (iii) after-effect—again, no force. Participants were randomly assigned to four groups, depending on the type of force that was applied during the “force field” phase. The robot was programmed to generate position-dependent forces—with positive (K+) or negative stiffness (K−)—or velocity-dependent forces, with either positive (B+) or negative viscosity (B−). We focused on path curvature, smoothness, and endpoint error; in the latter we distinguished between bias and variability components. Movements in the high-inertia direction are smoother and less curved; smoothness also increases with movement speed. Endpoint bias and variability are greater in, respectively, the high and low inertia directions. A robust dependence on movement speed was only observed in the longitudinal components of both bias and variability. The strongest and more consistent effects of perturbation were observed with negative viscosity (B−), which resulted in increased variability during force field adaptation and in a reduction of the endpoint bias, which was retained in the subsequent after-effect phase. These findings confirm that training with negative viscosity produces lasting effects in movement accuracy at all speeds. PMID:27965559

  10. LigParGen web server: an automatic OPLS-AA parameter generator for organic ligands

    PubMed Central

    Dodda, Leela S.

    2017-01-01

    Abstract The accurate calculation of protein/nucleic acid–ligand interactions or condensed phase properties by force field-based methods require a precise description of the energetics of intermolecular interactions. Despite the progress made in force fields, small molecule parameterization remains an open problem due to the magnitude of the chemical space; the most critical issue is the estimation of a balanced set of atomic charges with the ability to reproduce experimental properties. The LigParGen web server provides an intuitive interface for generating OPLS-AA/1.14*CM1A(-LBCC) force field parameters for organic ligands, in the formats of commonly used molecular dynamics and Monte Carlo simulation packages. This server has high value for researchers interested in studying any phenomena based on intermolecular interactions with ligands via molecular mechanics simulations. It is free and open to all at jorgensenresearch.com/ligpargen, and has no login requirements. PMID:28444340

  11. Traction patterns of tumor cells.

    PubMed

    Ambrosi, D; Duperray, A; Peschetola, V; Verdier, C

    2009-01-01

    The traction exerted by a cell on a planar deformable substrate can be indirectly obtained on the basis of the displacement field of the underlying layer. The usual methodology used to address this inverse problem is based on the exploitation of the Green tensor of the linear elasticity problem in a half space (Boussinesq problem), coupled with a minimization algorithm under force penalization. A possible alternative strategy is to exploit an adjoint equation, obtained on the basis of a suitable minimization requirement. The resulting system of coupled elliptic partial differential equations is applied here to determine the force field per unit surface generated by T24 tumor cells on a polyacrylamide substrate. The shear stress obtained by numerical integration provides quantitative insight of the traction field and is a promising tool to investigate the spatial pattern of force per unit surface generated in cell motion, particularly in the case of such cancer cells.

  12. Species-Specific Diversity of a Fixed Motor Pattern: The Electric Organ Discharge of Gymnotus

    PubMed Central

    Rodríguez-Cattaneo, Alejo; Pereira, Ana Carolina; Aguilera, Pedro A.; Crampton, William G. R.; Caputi, Angel A.

    2008-01-01

    Understanding fixed motor pattern diversity across related species provides a window for exploring the evolution of their underlying neural mechanisms. The electric organ discharges of weakly electric fishes offer several advantages as paradigmatic models for investigating how a neural decision is transformed into a spatiotemporal pattern of action. Here, we compared the far fields, the near fields and the electromotive force patterns generated by three species of the pulse generating New World gymnotiform genus Gymnotus. We found a common pattern in electromotive force, with the far field and near field diversity determined by variations in amplitude, duration, and the degree of synchronization of the different components of the electric organ discharges. While the rostral regions of the three species generate similar profiles of electromotive force and local fields, most of the species-specific differences are generated in the main body and tail regions of the fish. This causes that the waveform of the field is highly site dependant in all the studied species. These findings support a hypothesis of the relative separation of the electrolocation and communication carriers. The presence of early head negative waves in the rostral region, a species-dependent early positive wave at the caudal region, and the different relationship between the late negative peak and the main positive peak suggest three points of lability in the evolution of the electrogenic system: a) the variously timed neuronal inputs to different groups of electrocytes; b) the appearance of both rostrally and caudally innervated electrocytes, and c) changes in the responsiveness of the electrocyte membrane. PMID:18461122

  13. Subthalamic Nucleus Local Field Potential Activity Helps Encode Motor Effort Rather Than Force in Parkinsonism

    PubMed Central

    Pogosyan, Alek; Ashkan, Keyoumars; Cheeran, Binith; FitzGerald, James J.; Green, Alexander L.; Aziz, Tipu; Foltynie, Thomas; Limousin, Patricia; Zrinzo, Ludvic; Brown, Peter

    2015-01-01

    Local field potential (LFP) recordings from patients with deep brain stimulation electrodes in the basal ganglia have suggested that frequency-specific activities correlate with force or effort, but previous studies have not been able to disambiguate the two. Here, we dissociated effort from actual force generated by contrasting the force generation of different fingers while recording LFP activity from the subthalamic nucleus (STN) in patients with Parkinson's disease who had undergone functional surgery. Patients were studied while on their normal dopaminergic medication. We investigated the relationship between frequency-specific oscillatory activity in the STN and voluntary flexion of either the index or little finger at different effort levels. At each tested effort level (10%, 25%, and 40% of the maximal voluntary contraction force of each individual finger), the index finger generated larger force than the little finger. Movement-related suppression of beta-band power in the STN LFP was significantly modulated by effort, but not by which finger was used, suggesting that the beta suppression in the STN LFP during sustained contraction serves as a proxy for effort. The absolute force scaled with beta power suppression, but with the scaling determined by the maximal voluntary contraction force of the motor effector. Our results argue against the hypothesis that the basal ganglia are directly involved in the parameterization of force during movement and support a role of the STN in the control of motor effort to be attributed to a response. PMID:25878267

  14. Polarizable Force Field for DNA Based on the Classical Drude Oscillator: I. Refinement Using Quantum Mechanical Base Stacking and Conformational Energetics.

    PubMed

    Lemkul, Justin A; MacKerell, Alexander D

    2017-05-09

    Empirical force fields seek to relate the configuration of a set of atoms to its energy, thus yielding the forces governing its dynamics, using classical physics rather than more expensive quantum mechanical calculations that are computationally intractable for large systems. Most force fields used to simulate biomolecular systems use fixed atomic partial charges, neglecting the influence of electronic polarization, instead making use of a mean-field approximation that may not be transferable across environments. Recent hardware and software developments make polarizable simulations feasible, and to this end, polarizable force fields represent the next generation of molecular dynamics simulation technology. In this work, we describe the refinement of a polarizable force field for DNA based on the classical Drude oscillator model by targeting quantum mechanical interaction energies and conformational energy profiles of model compounds necessary to build a complete DNA force field. The parametrization strategy employed in the present work seeks to correct weak base stacking in A- and B-DNA and the unwinding of Z-DNA observed in the previous version of the force field, called Drude-2013. Refinement of base nonbonded terms and reparametrization of dihedral terms in the glycosidic linkage, deoxyribofuranose rings, and important backbone torsions resulted in improved agreement with quantum mechanical potential energy surfaces. Notably, we expand on previous efforts by explicitly including Z-DNA conformational energetics in the refinement.

  15. R.E.D. Server: a web service for deriving RESP and ESP charges and building force field libraries for new molecules and molecular fragments.

    PubMed

    Vanquelef, Enguerran; Simon, Sabrina; Marquant, Gaelle; Garcia, Elodie; Klimerak, Geoffroy; Delepine, Jean Charles; Cieplak, Piotr; Dupradeau, François-Yves

    2011-07-01

    R.E.D. Server is a unique, open web service, designed to derive non-polarizable RESP and ESP charges and to build force field libraries for new molecules/molecular fragments. It provides to computational biologists the means to derive rigorously molecular electrostatic potential-based charges embedded in force field libraries that are ready to be used in force field development, charge validation and molecular dynamics simulations. R.E.D. Server interfaces quantum mechanics programs, the RESP program and the latest version of the R.E.D. tools. A two step approach has been developed. The first one consists of preparing P2N file(s) to rigorously define key elements such as atom names, topology and chemical equivalencing needed when building a force field library. Then, P2N files are used to derive RESP or ESP charges embedded in force field libraries in the Tripos mol2 format. In complex cases an entire set of force field libraries or force field topology database is generated. Other features developed in R.E.D. Server include help services, a demonstration, tutorials, frequently asked questions, Jmol-based tools useful to construct PDB input files and parse R.E.D. Server outputs as well as a graphical queuing system allowing any user to check the status of R.E.D. Server jobs.

  16. A micropatterning and image processing approach to simplify measurement of cellular traction forces

    PubMed Central

    Polio, Samuel R.; Rothenberg, Katheryn E.; Stamenović, Dimitrije; Smith, Michael L.

    2012-01-01

    Quantification of the traction forces that cells apply to their surroundings has been critical to the advancement of our understanding of cancer, development and basic cell biology. This field was made possible through the development of engineered cell culture systems that permit optical measurement of cell-mediated displacements and computational algorithms that allow conversion of these displacements into stresses and forces. Here, we present a novel advancement of traction force microscopy on polyacrylamide (PAA) gels that addresses limitations of existing technologies. Through an indirect patterning technique, we generated PAA gels with fluorescent 1 μm dot markers in a regularized array. This improves existing traction measurements since (i) multiple fields of view can be measured in one experiment without the need for cell removal; (ii) traction vectors are modeled as discrete point forces, and not as a continuous field, using an extremely simple computational algorithm that we have made available online; and (iii) the pattern transfer technique is amenable to any of the published techniques for producing patterns on glass. In the future, this technique will be used for measuring traction forces on complex patterns with multiple, spatially distinct ligands in systems for applying strain to the substrate, and in sandwich cultures that generate quasi-three-dimensional environments for cells. PMID:21884832

  17. Lorentz force particle analyzer

    NASA Astrophysics Data System (ADS)

    Wang, Xiaodong; Thess, André; Moreau, René; Tan, Yanqing; Dai, Shangjun; Tao, Zhen; Yang, Wenzhi; Wang, Bo

    2016-07-01

    A new contactless technique is presented for the detection of micron-sized insulating particles in the flow of an electrically conducting fluid. A transverse magnetic field brakes this flow and tends to become entrained in the flow direction by a Lorentz force, whose reaction force on the magnetic-field-generating system can be measured. The presence of insulating particles suspended in the fluid produce changes in this Lorentz force, generating pulses in it; these pulses enable the particles to be counted and sized. A two-dimensional numerical model that employs a moving mesh method demonstrates the measurement principle when such a particle is present. Two prototypes and a three-dimensional numerical model are used to demonstrate the feasibility of a Lorentz force particle analyzer (LFPA). The findings of this study conclude that such an LFPA, which offers contactless and on-line quantitative measurements, can be applied to an extensive range of applications. These applications include measurements of the cleanliness of high-temperature and aggressive molten metal, such as aluminum and steel alloys, and the clean manufacturing of semiconductors.

  18. The application of tailor-made force fields and molecular dynamics for NMR crystallography: a case study of free base cocaine

    PubMed Central

    Neumann, Marcus A.

    2017-01-01

    Motional averaging has been proven to be significant in predicting the chemical shifts in ab initio solid-state NMR calculations, and the applicability of motional averaging with molecular dynamics has been shown to depend on the accuracy of the molecular mechanical force field. The performance of a fully automatically generated tailor-made force field (TMFF) for the dynamic aspects of NMR crystallography is evaluated and compared with existing benchmarks, including static dispersion-corrected density functional theory calculations and the COMPASS force field. The crystal structure of free base cocaine is used as an example. The results reveal that, even though the TMFF outperforms the COMPASS force field for representing the energies and conformations of predicted structures, it does not give significant improvement in the accuracy of NMR calculations. Further studies should direct more attention to anisotropic chemical shifts and development of the method of solid-state NMR calculations. PMID:28250956

  19. Molecular modeling studies of structural properties of polyvinyl alcohol: a comparative study using INTERFACE force field.

    PubMed

    Radosinski, Lukasz; Labus, Karolina

    2017-10-05

    Polyvinyl alcohol (PVA) is a material with a variety of applications in separation, biotechnology, and biomedicine. Using combined Monte Carlo and molecular dynamics techniques, we present an extensive comparative study of second- and third-generation force fields Universal, COMPASS, COMPASS II, PCFF, and the newly developed INTERFACE, as applied to this system. In particular, we show that an INTERFACE force field provides a possibility of composing a reliable atomistic model to reproduce density change of PVA matrix in a narrow temperature range (298-348 K) and calculate a thermal expansion coefficient with reasonable accuracy. Thus, the INTERFACE force field may be used to predict mechanical properties of the PVA system, being a scaffold for hydrogels, with much greater accuracy than latter approaches. Graphical abstract Molecular Dynamics and Monte Carlo studies indicate that it is possible to predict properties of the PVA in narrow temperature range by using the INTERFACE force field.

  20. Analysis of magnetic gradients to study gravitropism.

    PubMed

    Hasenstein, Karl H; John, Susan; Scherp, Peter; Povinelli, Daniel; Mopper, Susan

    2013-01-01

    Gravitropism typically is generated by dense particles that respond to gravity. Experimental stimulation by high-gradient magnetic fields provides a new approach to selectively manipulate the gravisensing system. The movement of corn, wheat, and potato starch grains in suspension was examined with videomicroscopy during parabolic flights that generated 20 to 25 s of weightlessness. During weightlessness, a magnetic gradient was generated by inserting a wedge into a uniform, external magnetic field that caused repulsion of starch grains. The resultant velocity of movement was compared with the velocity of sedimentation under 1 g conditions. The high-gradient magnetic fields repelled the starch grains and generated a force of at least 0.6 g. Different wedge shapes significantly affected starch velocity and directionality of movement. Magnetic gradients are able to move diamagnetic compounds under weightless or microgravity conditions and serve as directional stimulus during seed germination in low-gravity environments. Further work can determine whether gravity sensing is based on force or contact between amyloplasts and statocyte membrane system.

  1. Catch trials in force field learning influence adaptation and consolidation of human motor memory

    PubMed Central

    Stockinger, Christian; Focke, Anne; Stein, Thorsten

    2014-01-01

    Force field studies are a common tool to investigate motor adaptation and consolidation. Thereby, subjects usually adapt their reaching movements to force field perturbations induced by a robotic device. In this context, so-called catch trials, in which the disturbing forces are randomly turned off, are commonly used to detect after-effects of motor adaptation. However, catch trials also produce sudden large motor errors that might influence the motor adaptation and the consolidation process. Yet, the detailed influence of catch trials is far from clear. Thus, the aim of this study was to investigate the influence of catch trials on motor adaptation and consolidation in force field experiments. Therefore, 105 subjects adapted their reaching movements to robot-generated force fields. The test groups adapted their reaching movements to a force field A followed by learning a second interfering force field B before retest of A (ABA). The control groups were not exposed to force field B (AA). To examine the influence of diverse catch trial ratios, subjects received catch trials during force field adaptation with a probability of either 0, 10, 20, 30, or 40%, depending on the group. First, the results on motor adaptation revealed significant differences between the diverse catch trial ratio groups. With increasing amount of catch trials, the subjects' motor performance decreased and subjects' ability to accurately predict the force field—and therefore internal model formation—was impaired. Second, our results revealed that adapting with catch trials can influence the following consolidation process as indicated by a partial reduction to interference. Here, the optimal catch trial ratio was 30%. However, detection of consolidation seems to be biased by the applied measure of performance. PMID:24795598

  2. Transformation of body force localized near the surface of a half-space into equivalent surface stresses.

    PubMed

    Rouge, Clémence; Lhémery, Alain; Ségur, Damien

    2013-10-01

    An electromagnetic acoustic transducer (EMAT) or a laser used to generate elastic waves in a component is often described as a source of body force confined in a layer close to the surface. On the other hand, models for elastic wave radiation more efficiently handle sources described as distributions of surface stresses. Equivalent surface stresses can be obtained by integrating the body force with respect to depth. They are assumed to generate the same field as the one that would be generated by the body force. Such an integration scheme can be applied to Lorentz force for conventional EMAT configuration. When applied to magnetostrictive force generated by an EMAT in a ferromagnetic material, the same scheme fails, predicting a null stress. Transforming body force into equivalent surface stresses therefore, requires taking into account higher order terms of the force moments, the zeroth order being the simple force integration over the depth. In this paper, such a transformation is derived up to the second order, assuming that body forces are localized at depths shorter than the ultrasonic wavelength. Two formulations are obtained, each having some advantages depending on the application sought. They apply regardless of the nature of the force considered.

  3. Hydration free energies of cyanide and hydroxide ions from molecular dynamics simulations with accurate force fields

    USGS Publications Warehouse

    Lee, M.W.; Meuwly, M.

    2013-01-01

    The evaluation of hydration free energies is a sensitive test to assess force fields used in atomistic simulations. We showed recently that the vibrational relaxation times, 1D- and 2D-infrared spectroscopies for CN(-) in water can be quantitatively described from molecular dynamics (MD) simulations with multipolar force fields and slightly enlarged van der Waals radii for the C- and N-atoms. To validate such an approach, the present work investigates the solvation free energy of cyanide in water using MD simulations with accurate multipolar electrostatics. It is found that larger van der Waals radii are indeed necessary to obtain results close to the experimental values when a multipolar force field is used. For CN(-), the van der Waals ranges refined in our previous work yield hydration free energy between -72.0 and -77.2 kcal mol(-1), which is in excellent agreement with the experimental data. In addition to the cyanide ion, we also study the hydroxide ion to show that the method used here is readily applicable to similar systems. Hydration free energies are found to sensitively depend on the intermolecular interactions, while bonded interactions are less important, as expected. We also investigate in the present work the possibility of applying the multipolar force field in scoring trajectories generated using computationally inexpensive methods, which should be useful in broader parametrization studies with reduced computational resources, as scoring is much faster than the generation of the trajectories.

  4. Lorentz Force on Sodium and Chlorine Ions in a Salt Water Solution Flow under a Transverse Magnetic Field

    ERIC Educational Resources Information Center

    De Luca, R.

    2009-01-01

    It is shown that, by applying elementary concepts in electromagnetism and electrochemistry to a system consisting of salt water flowing in a thin rectangular pipe at an average velocity v[subscript A] under the influence of a transverse magnetic field B[subscript 0], an electromotive force generator can be conceived. In fact, the Lorentz force…

  5. MATCH: An Atom- Typing Toolset for Molecular Mechanics Force Fields

    PubMed Central

    Yesselman, Joseph D.; Price, Daniel J.; Knight, Jennifer L.; Brooks, Charles L.

    2011-01-01

    We introduce a toolset of program libraries collectively titled MATCH (Multipurpose Atom-Typer for CHARMM) for the automated assignment of atom types and force field parameters for molecular mechanics simulation of organic molecules. The toolset includes utilities for the conversion from multiple chemical structure file formats into a molecular graph. A general chemical pattern-matching engine using this graph has been implemented whereby assignment of molecular mechanics atom types, charges and force field parameters is achieved by comparison against a customizable list of chemical fragments. While initially designed to complement the CHARMM simulation package and force fields by generating the necessary input topology and atom-type data files, MATCH can be expanded to any force field and program, and has core functionality that makes it extendable to other applications such as fragment-based property prediction. In the present work, we demonstrate the accurate construction of atomic parameters of molecules within each force field included in CHARMM36 through exhaustive cross validation studies illustrating that bond increment rules derived from one force field can be transferred to another. In addition, using leave-one-out substitution it is shown that it is also possible to substitute missing intra and intermolecular parameters with ones included in a force field to complete the parameterization of novel molecules. Finally, to demonstrate the robustness of MATCH and the coverage of chemical space offered by the recent CHARMM CGENFF force field (Vanommeslaeghe, et al., JCC., 2010, 31, 671–690), one million molecules from the PubChem database of small molecules are typed, parameterized and minimized. PMID:22042689

  6. Near-field multiple traps of paraxial acoustic vortices with strengthened gradient force generated by sector transducer array

    NASA Astrophysics Data System (ADS)

    Wang, Qingdong; Li, Yuzhi; Ma, Qingyu; Guo, Gepu; Tu, Juan; Zhang, Dong

    2018-01-01

    In order to improve the capability of particle trapping close to the source plane, theoretical and experimental studies on near-field multiple traps of paraxial acoustic vortices (AVs) with a strengthened acoustic gradient force (AGF) generated by a sector transducer array were conducted. By applying the integration of point source radiation, numerical simulations for the acoustic fields generated by the sector transducer array were conducted and compared with those produced by the circular transducer array. It was proved that strengthened AGFs of near-field multiple AVs with higher peak pressures and smaller vortex radii could be produced by the sector transducer array with a small topological charge. The axial distributions of the equivalent potential gradient indicated that the AGFs of paraxial AVs in the near field were much higher than those in the far field, and the distances at the near-field vortex antinodes were also proved to be the ideal trapping positions with relatively higher AGFs. With the established 8-channel AV generation system, theoretical studies were also verified by the experimental measurements of pressure and phase for AVs with various topological charges. The formation of near-field multiple paraxial AVs was verified by the cross-sectional circular pressure distributions with perfect phase spirals around central pressure nulls, and was also proved by the vortex nodes and antinodes along the center axis. The favorable results demonstrated the feasibility of generating near-field multiple traps of paraxial AVs with strengthened AGF using the sector transducer array, and suggested the potential applications of close-range particle trapping in biomedical engineering.

  7. Conservative and dissipative force field for simulation of coarse-grained alkane molecules: A bottom-up approach

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Trément, Sébastien; Rousseau, Bernard, E-mail: bernard.rousseau@u-psud.fr; Schnell, Benoît

    2014-04-07

    We apply operational procedures available in the literature to the construction of coarse-grained conservative and friction forces for use in dissipative particle dynamics (DPD) simulations. The full procedure rely on a bottom-up approach: large molecular dynamics trajectories of n-pentane and n-decane modeled with an anisotropic united atom model serve as input for the force field generation. As a consequence, the coarse-grained model is expected to reproduce at least semi-quantitatively structural and dynamical properties of the underlying atomistic model. Two different coarse-graining levels are studied, corresponding to five and ten carbon atoms per DPD bead. The influence of the coarse-graining levelmore » on the generated force fields contributions, namely, the conservative and the friction part, is discussed. It is shown that the coarse-grained model of n-pentane correctly reproduces self-diffusion and viscosity coefficients of real n-pentane, while the fully coarse-grained model for n-decane at ambient temperature over-predicts diffusion by a factor of 2. However, when the n-pentane coarse-grained model is used as a building block for larger molecule (e.g., n-decane as a two blobs model), a much better agreement with experimental data is obtained, suggesting that the force field constructed is transferable to large macro-molecular systems.« less

  8. Force field dependent solution properties of glycine oligomers

    PubMed Central

    Drake, Justin A.

    2015-01-01

    Molecular simulations can be used to study disordered polypeptide systems and to generate hypotheses on the underlying structural and thermodynamic mechanisms that govern their function. As the number of disordered protein systems investigated with simulations increase, it is important to understand how particular force fields affect the structural properties of disordered polypeptides in solution. To this end, we performed a comparative structural analysis of Gly3 and Gly10 in aqueous solution from all-atom, microsecond MD simulations using the CHARMM 27 (C27), CHARMM 36 (C36), and Amber ff12SB force fields. For each force field, Gly3 and Gly10 were simulated for at least 300 ns and 1 μs, respectively. Simulating oligoglycines of two different lengths allows us to evaluate how force field effects depend on polypeptide length. Using a variety of structural metrics (e.g. end-to-end distance, radius of gyration, dihedral angle distributions), we characterize the distribution of oligoglycine conformers for each force field and show that each sample conformation space differently, yielding considerably different structural tendencies of the same oligoglycine model in solution. Notably, we find that C36 samples more extended oligoglycine structures than both C27 and ff12SB. PMID:25952623

  9. Upstream-advancing waves generated by three-dimensional moving disturbances

    NASA Astrophysics Data System (ADS)

    Lee, Seung-Joon; Grimshaw, Roger H. J.

    1990-02-01

    The wave field resulting from a surface pressure or a bottom topography in a horizontally unbounded domain is studied. Upstream-advancing waves successively generated by various forcing disturbances moving with near-resonant speeds are found by numerically solving a forced Kadomtsev-Petviashvili (fKP) equation, which shows in its simplest form the interplay of a basic linear wave operator, longitudinal and transverse dispersion, nonlinearity, and forcing. Curved solitary waves are found as a slowly varying similarity solution of the Kadomtsev-Petviashvili (KP) equation, and are favorably compared with the upstream-advancing waves numerically obtained.

  10. ff14ipq: A Self-Consistent Force Field for Condensed-Phase Simulations of Proteins

    PubMed Central

    2015-01-01

    We present the ff14ipq force field, implementing the previously published IPolQ charge set for simulations of complete proteins. Minor modifications to the charge derivation scheme and van der Waals interactions between polar atoms are introduced. Torsion parameters are developed through a generational learning approach, based on gas-phase MP2/cc-pVTZ single-point energies computed of structures optimized by the force field itself rather than the quantum benchmark. In this manner, we sacrifice information about the true quantum minima in order to ensure that the force field maintains optimal agreement with the MP2/cc-pVTZ benchmark for the ensembles it will actually produce in simulations. A means of making the gas-phase torsion parameters compatible with solution-phase IPolQ charges is presented. The ff14ipq model is an alternative to ff99SB and other Amber force fields for protein simulations in programs that accommodate pair-specific Lennard–Jones combining rules. The force field gives strong performance on α-helical and β-sheet oligopeptides as well as globular proteins over microsecond time scale simulations, although it has not yet been tested in conjunction with lipid and nucleic acid models. We show how our choices in parameter development influence the resulting force field and how other choices that may have appeared reasonable would actually have led to poorer results. The tools we developed may also aid in the development of future fixed-charge and even polarizable biomolecular force fields. PMID:25328495

  11. The multiscale coarse-graining method. II. Numerical implementation for coarse-grained molecular models

    PubMed Central

    Noid, W. G.; Liu, Pu; Wang, Yanting; Chu, Jhih-Wei; Ayton, Gary S.; Izvekov, Sergei; Andersen, Hans C.; Voth, Gregory A.

    2008-01-01

    The multiscale coarse-graining (MS-CG) method [S. Izvekov and G. A. Voth, J. Phys. Chem. B 109, 2469 (2005);J. Chem. Phys. 123, 134105 (2005)] employs a variational principle to determine an interaction potential for a CG model from simulations of an atomically detailed model of the same system. The companion paper proved that, if no restrictions regarding the form of the CG interaction potential are introduced and if the equilibrium distribution of the atomistic model has been adequately sampled, then the MS-CG variational principle determines the exact many-body potential of mean force (PMF) governing the equilibrium distribution of CG sites generated by the atomistic model. In practice, though, CG force fields are not completely flexible, but only include particular types of interactions between CG sites, e.g., nonbonded forces between pairs of sites. If the CG force field depends linearly on the force field parameters, then the vector valued functions that relate the CG forces to these parameters determine a set of basis vectors that span a vector subspace of CG force fields. The companion paper introduced a distance metric for the vector space of CG force fields and proved that the MS-CG variational principle determines the CG force force field that is within that vector subspace and that is closest to the force field determined by the many-body PMF. The present paper applies the MS-CG variational principle for parametrizing molecular CG force fields and derives a linear least squares problem for the parameter set determining the optimal approximation to this many-body PMF. Linear systems of equations for these CG force field parameters are derived and analyzed in terms of equilibrium structural correlation functions. Numerical calculations for a one-site CG model of methanol and a molecular CG model of the EMIM+∕NO3− ionic liquid are provided to illustrate the method. PMID:18601325

  12. Electro-hydrodynamic force field and flow patterns generated by a DC corona discharge in the air

    NASA Astrophysics Data System (ADS)

    Monrolin, Nicolas; Plouraboue, Franck; Praud, Olivier

    2016-11-01

    Ionic wind refers to the electro-convection of ionised air between high voltage electrodes. Microscopic ion-neutral collisions are responsible for momentum transfer from accelerated ions, subjected to the electric field, to the neutral gas molecules resulting in a macroscopic airflow acceleration. In the past decades it has been investigated for various purposes from food drying through aerodynamic flow control and eventually laptop cooling. One consequence of air acceleration between the electrodes is thrust generation, often referred to as the Biefeld-Brown effect or electro-hydrodynamic thrust. In this experimental study, the ionic wind velocity field is measured with the PIV method. From computing the acceleration of the air we work out the electrostatic force field for various electrodes configurations. This enables an original direct evaluation of the force distribution as well as the influence of electrodes shape and position. Thrust computation based on the flow acceleration are compared with digital scale measurements. Complex flow features are highlighted such as vortex shedding, indicating that aerodynamic effects may play a significant role. Furthermore, the aerodynamic drag force exerted on the electrodes is quantified by choosing an appropriate control volume. Authors thank Region Midi-Pyrenee and CNES Launcher Directorate for financial support.

  13. Precise measurement of surface plasmon forces at a metal-dielectric interface using a calibrated evanescent wave

    NASA Astrophysics Data System (ADS)

    Liu, Lulu; Woolf, Alex

    2015-03-01

    By observing the motion of an optically trapped microscopic colloid, sub-piconewton static and dynamical forces have been measured using a technique called photonic force microscopy. This technique, though potentially powerful, has in the past struggled to make precise measurements in the vicinity of a reflective or metallic interface, due to distortions of the optical field. We introduce a new in-situ, contact-free calibration method for particle tracking using an evanescent wave, and demonstrate its expanded capability by the precise measurement of forces of interaction between a single colloid and the optical field generated by a propagating surface plasmon polariton on gold.

  14. Einstein's osmotic equilibrium of colloidal suspensions in conservative force fields

    NASA Astrophysics Data System (ADS)

    Fu, Jinxin; Ou-Yang, H. Daniel

    2014-09-01

    Predicted by Einstein in his 1905 paper on Brownian motion, colloidal particles in suspension reach osmotic equilibrium under gravity. The idea was demonstrated by J.B. Perrin to win Nobel Prize in Physics in 1926. We show Einstein's equation for osmotic equilibrium can be applied to colloids in a conservative force field generated by optical gradient forces. We measure the osmotic equation of state of 100nm Polystyrene latex particles in the presence of KCl salt and PEG polymer. We also obtain the osmotic compressibility, which is important for determining colloidal stability and the internal chemical potential, which is useful for predicting the phase transition of colloidal systems. This generalization allows for the use of any conservative force fields for systems ranging from colloidal systems to macromolecular solutions.

  15. Application of the maximum entropy principle to determine ensembles of intrinsically disordered proteins from residual dipolar couplings.

    PubMed

    Sanchez-Martinez, M; Crehuet, R

    2014-12-21

    We present a method based on the maximum entropy principle that can re-weight an ensemble of protein structures based on data from residual dipolar couplings (RDCs). The RDCs of intrinsically disordered proteins (IDPs) provide information on the secondary structure elements present in an ensemble; however even two sets of RDCs are not enough to fully determine the distribution of conformations, and the force field used to generate the structures has a pervasive influence on the refined ensemble. Two physics-based coarse-grained force fields, Profasi and Campari, are able to predict the secondary structure elements present in an IDP, but even after including the RDC data, the re-weighted ensembles differ between both force fields. Thus the spread of IDP ensembles highlights the need for better force fields. We distribute our algorithm in an open-source Python code.

  16. Magnetic field sensor based on the Ampere's force using dual-polarization DBR fiber laser

    NASA Astrophysics Data System (ADS)

    Yao, Shuang; Zhang, Yang; Guan, Baiou

    2015-08-01

    A novel magnetic field sensor using distributed Bragg reflector (DBR) fiber laser by Ampere's force effect is proposed and experimentally demonstrated. The key sensing element, that is the dual-polarization DBR fiber laser, is fixed on the middle part of two copper plates which carry the current. Ampere's force is applied onto the coppers due to an external magnetic field generated by a DC solenoid. Thus, the lateral force from the coppers is converted to a corresponding beat frequency signal shift produced by the DBR laser. The electric current sensing is also realized by the same configuration and same principle simultaneously in an intuitive manner. Good agreement between the theory calculation and the experimental results is obtained, which shows a good linearity. This sensor's sensitivity to the magnetic field and to the electric current finally reaches ~258.92 kHz/mT and ~1.08727 MHz/A, respectively.

  17. Dissolution study of active pharmaceutical ingredients using molecular dynamics simulations with classical force fields

    NASA Astrophysics Data System (ADS)

    Greiner, Maximilian; Elts, Ekaterina; Schneider, Julian; Reuter, Karsten; Briesen, Heiko

    2014-11-01

    The CHARMM, general Amber and OPLS force fields are evaluated for their suitability in simulating the molecular dynamics of the dissolution of the hydrophobic, small-molecule active pharmaceutical ingredients aspirin, ibuprofen, and paracetamol in aqueous media. The force fields are evaluated by comparison with quantum chemical simulations or experimental references on the basis of the following capabilities: accurately representing intra- and intermolecular interactions, appropriately reproducing crystal lattice parameters, adequately describing thermodynamic properties, and the qualitative description of the dissolution behavior. To make this approach easily accessible for evaluating the dissolution properties of novel drug candidates in the early stage of drug development, the force field parameter files are generated using online resources such as the SWISS PARAM servers, and the software packages ACPYPE and Maestro. All force fields are found to reproduce the intermolecular interactions with a reasonable degree of accuracy, with the general Amber and CHARMM force fields showing the best agreement with quantum mechanical calculations. A stable crystal bulk structure is obtained for all model substances, except for ibuprofen, where the reproductions of the lattice parameters and observed crystal stability are considerably poor for all force fields. The heat of solution used to evaluate the solid-to-solution phase transitions is found to be in qualitative agreement with the experimental data for all combinations tested, with the results being quantitatively optimum for the general Amber and CHARMM force fields. For aspirin and paracetamol, stable crystal-water interfaces were obtained. The (100), (110), (011) and (001) interfaces of aspirin or paracetamol and water were simulated for each force field for 30 ns. Although generally expected as a rare event, in some of the simulations, dissolution is observed at 310 K and ambient pressure conditions.

  18. Generation of 24 T at 4.2 K using a layer-wound GdBCO insert coil with Nb3Sn and Nb-Ti external magnetic field coils

    NASA Astrophysics Data System (ADS)

    Matsumoto, S.; Kiyoshi, T.; Otsuka, A.; Hamada, M.; Maeda, H.; Yanagisawa, Y.; Nakagome, H.; Suematsu, H.

    2012-02-01

    High-temperature superconducting (HTS) magnets are believed to be a practical option in the development of high field nuclear magnetic resonance (NMR) systems. The development of a 600 MHz NMR system that uses an HTS magnet and a probe with an HTS radio frequency coil is underway. The HTS NMR magnet is expected to reduce the volume occupied by the magnet and to encourage users to install higher field NMR systems. The tolerance to high tensile stress is expected for HTS conductors in order to reduce the magnet in volume. A layer-wound Gd-Ba-Cu-O (GdBCO) insert coil was fabricated in order to investigate its properties under a high electromagnetic force in a high magnetic field. The GdBCO insert coil was successfully operated at a current of up to 321 A and an electromagnetic force BJR of 408 MPa in an external magnetic field generated by Nb3Sn and Nb-Ti low-temperature superconducting coils. The GdBCO insert coil also managed to generate a magnetic field of 6.8 T at the center of the coil in an external magnetic field of 17.2 T. The superconducting magnet consisting of GdBCO, Nb3Sn and Nb-Ti coils successfully generated a magnetic field of 24.0 T at 4.2 K, which represents a new record for a superconducting magnet.

  19. Hydraulic pressures generated in magnetic ionic liquids by paramagnetic fluid/air interfaces inside of uniform tangential magnetic fields.

    PubMed

    Scovazzo, Paul; Portugal, Carla A M; Rosatella, Andreia A; Afonso, Carlos A M; Crespo, João G

    2014-08-15

    Magnetic Ionic Liquid (MILs), novel magnetic molecules that form "pure magnetic liquids," will follow the Ferrohydrodynamic Bernoulli Relationship. Based on recent literature, the modeling of this fluid system is an open issue and potentially controversial. We imposed uniform magnetic fields parallel to MIL/air interfaces where the capillary forces were negligible, the Quincke Problem. The size and location of the bulk fluid as well as the size and location of the fluid/air interface inside of the magnetic field were varied. MIL properties varied included the density, magnetic susceptibility, chemical structure, and magnetic element. Uniform tangential magnetic fields pulled the MILs up counter to gravity. The forces per area were not a function of the volume, the surface area inside of the magnetic field, or the volume displacement. However, the presence of fluid/air interfaces was necessary for the phenomena. The Ferrohydrodynamic Bernoulli Relationship predicted the phenomena with the forces being directly related to the fluid's volumetric magnetic susceptibility and the square of the magnetic field strength. [emim][FeCl4] generated the greatest hydraulic head (64-mm or 910 Pa at 1.627 Tesla). This work could aid in experimental design, when free surfaces are involved, and in the development of MIL applications. Copyright © 2014 Elsevier Inc. All rights reserved.

  20. Influence of radius of cylinder HTS bulk on guidance force in a maglev vehicle system

    NASA Astrophysics Data System (ADS)

    Longcai, Zhang

    2014-07-01

    Bulk superconductors had great potential for various engineering applications, especially in a high-temperature superconducting (HTS) maglev vehicle system. In such a system, the HTS bulks were always exposed to AC external magnetic field, which was generated by the inhomogeneous surface magnetic field of the NdFeB guideway. In our previous work, it was observed that the guidance force of the YBCO bulk over the NdFeB guideway used in the HTS maglev vehicle system was decayed by the application of the AC external magnetic field. In this paper, we investigated the influence of the radius of the cylinder HTS bulk exposed to an AC magnetic field perturbation on the guidance force in the maglev vehicle system. From the results, it was found that the guidance force was stronger for the bulk with bigger radius and the guidance force decay rates of the bulks were approximately equal despite of the different radius in the maglev vehicle system. Therefore, in order to obtain higher guidance force in the maglev vehicle system, we could use the cylinder HTS bulks with the bigger radius.

  1. Direct Measurement of Optical Force Induced by Near-Field Plasmonic Cavity Using Dynamic Mode AFM

    PubMed Central

    Guan, Dongshi; Hang, Zhi Hong; Marcet, Zsolt; Liu, Hui; Kravchenko, I. I.; Chan, C. T.; Chan, H. B.; Tong, Penger

    2015-01-01

    Plasmonic nanostructures have attracted much attention in recent years because of their potential applications in optical manipulation through near-field enhancement. Continuing experimental efforts have been made to develop accurate techniques to directly measure the near-field optical force induced by the plasmonic nanostructures in the visible frequency range. In this work, we report a new application of dynamic mode atomic force microscopy (DM-AFM) in the measurement of the enhanced optical force acting on a nano-structured plasmonic resonant cavity. The plasmonic cavity is made of an upper gold-coated glass sphere and a lower quartz substrate patterned with an array of subwavelength gold disks. In the near-field when the sphere is positioned close to the disk array, plasmonic resonance is excited in the cavity and the induced force by a 1550 nm infrared laser is found to be increased by an order of magnitude compared with the photon pressure generated by the same laser light. The experiment demonstrates that DM-AFM is a powerful tool for the study of light induced forces and their enhancement in plasmonic nanostructures. PMID:26586455

  2. Development of a Polarizable Force Field For Proteins via Ab Initio Quantum Chemistry: First Generation Model and Gas Phase Tests

    PubMed Central

    KAMINSKI, GEORGE A.; STERN, HARRY A.; BERNE, B. J.; FRIESNER, RICHARD A.; CAO, YIXIANG X.; MURPHY, ROBERT B.; ZHOU, RUHONG; HALGREN, THOMAS A.

    2014-01-01

    We present results of developing a methodology suitable for producing molecular mechanics force fields with explicit treatment of electrostatic polarization for proteins and other molecular system of biological interest. The technique allows simulation of realistic-size systems. Employing high-level ab initio data as a target for fitting allows us to avoid the problem of the lack of detailed experimental data. Using the fast and reliable quantum mechanical methods supplies robust fitting data for the resulting parameter sets. As a result, gas-phase many-body effects for dipeptides are captured within the average RMSD of 0.22 kcal/mol from their ab initio values, and conformational energies for the di- and tetrapeptides are reproduced within the average RMSD of 0.43 kcal/mol from their quantum mechanical counterparts. The latter is achieved in part because of application of a novel torsional fitting technique recently developed in our group, which has already been used to greatly improve accuracy of the peptide conformational equilibrium prediction with the OPLS-AA force field.1 Finally, we have employed the newly developed first-generation model in computing gas-phase conformations of real proteins, as well as in molecular dynamics studies of the systems. The results show that, although the overall accuracy is no better than what can be achieved with a fixed-charges model, the methodology produces robust results, permits reasonably low computational cost, and avoids other computational problems typical for polarizable force fields. It can be considered as a solid basis for building a more accurate and complete second-generation model. PMID:12395421

  3. Structure and Dynamics of Fluid Planets

    NASA Astrophysics Data System (ADS)

    Houben, H.

    2014-12-01

    Attention to conservation laws gives a comprehensive picture of the structure and dynamics of gas giants: Atmospheric differential rotation is generated by tidal torques (dependent on tropospheric static stability) and is dragged into the interior by turbulent viscosity. The consequent heat dissipation generates baroclinicity and approximate thermal wind balance, not Taylor-Proudman conditions. Magnetic Lorentz forces have no effect on the zonal wind, but generate a meridional wind approximately parallel to field lines. Thus, magnetic field generation in the interior is dominated by the ω-effect (zonal field wound up by differential rotation), with the α-effect (meridional field generated by turbulence) severely limited by the β-effect (turbulence-enhanced resistivity). The meridional circulation quenches the ω-effect so that a steady state is reached and also limits the magnitude of the non-axisymmetric field under certain circumstances. The stability of the steady state requires further study. The magnetic field travels with the E X B drift, rather than the fluid velocity. Work by the fluid on the magnetic field balances work by the magnetic field on the fluid, so the global heat flux is little changed. In conducting regions the meridional density distribution (and gravity field) is most sensitive to the total pressure (gas + magnetic) and the ω-effect. In nonconducting regions, the gas pressure, centrifugal force, and differential rotation dominate. The differential rotation varies at least as fast as r³, so the gravitational signal is small compared to that for differential rotation on cylinders. The entropy minimum near the tropopause allows meteorology to be dominated by (relatively) long-lived, closed potential temperature surfaces, usually called spots, which conserve potential vorticity. All of the above must be taken into account to properly assimilate any available observational data to further specify the interior properties of fluid planets.

  4. Force Provider Solid Waste Characterization Study

    DTIC Science & Technology

    2004-08-01

    energy converter (WEC) and/or composter . For a five-day period in June 2000, the solid waste generated by soldiers at the Force Provider Training Module...MATERIALS REDUCTION WASTE DISPOSAL MILITARY FACILITIES SANITARY ENGINEERING DISPOSAL FORCE PROVIDER FIELD FEEDING COMPOSTS WASTES GARBAGE WASTE RECYCLING...waste reduction through onsite waste-to-energy conversion and/or composting . The work was performed by Hughes Associates, Inc., 3610 Commerce

  5. Explicit polarization: a quantum mechanical framework for developing next generation force fields.

    PubMed

    Gao, Jiali; Truhlar, Donald G; Wang, Yingjie; Mazack, Michael J M; Löffler, Patrick; Provorse, Makenzie R; Rehak, Pavel

    2014-09-16

    Conspectus Molecular mechanical force fields have been successfully used to model condensed-phase and biological systems for a half century. By means of careful parametrization, such classical force fields can be used to provide useful interpretations of experimental findings and predictions of certain properties. Yet, there is a need to further improve computational accuracy for the quantitative prediction of biomolecular interactions and to model properties that depend on the wave functions and not just the energy terms. A new strategy called explicit polarization (X-Pol) has been developed to construct the potential energy surface and wave functions for macromolecular and liquid-phase simulations on the basis of quantum mechanics rather than only using quantum mechanical results to fit analytic force fields. In this spirit, this approach is called a quantum mechanical force field (QMFF). X-Pol is a general fragment method for electronic structure calculations based on the partition of a condensed-phase or macromolecular system into subsystems ("fragments") to achieve computational efficiency. Here, intrafragment energy and the mutual electronic polarization of interfragment interactions are treated explicitly using quantum mechanics. X-Pol can be used as a general, multilevel electronic structure model for macromolecular systems, and it can also serve as a new-generation force field. As a quantum chemical model, a variational many-body (VMB) expansion approach is used to systematically improve interfragment interactions, including exchange repulsion, charge delocalization, dispersion, and other correlation energies. As a quantum mechanical force field, these energy terms are approximated by empirical functions in the spirit of conventional molecular mechanics. This Account first reviews the formulation of X-Pol, in the full variationally correct version, in the faster embedded version, and with systematic many-body improvements. We discuss illustrative examples involving water clusters (which show the power of two-body corrections), ethylmethylimidazolium acetate ionic liquids (which reveal that the amount of charge transfer between anion and cation is much smaller than what has been assumed in some classical simulations), and a solvated protein in aqueous solution (which shows that the average charge distribution of carbonyl groups along the polypeptide chain depends strongly on their position in the sequence, whereas they are fixed in most classical force fields). The development of QMFFs also offers an opportunity to extend the accuracy of biochemical simulations to areas where classical force fields are often insufficient, especially in the areas of spectroscopy, reactivity, and enzyme catalysis.

  6. Improvement in thrust force estimation of solenoid valve considering minor hysteresis loop

    NASA Astrophysics Data System (ADS)

    Yoon, Myung-Hwan; Choi, Yun-Yong; Hong, Jung-Pyo

    2017-05-01

    Solenoid valve is a very important hydraulic actuator for an automatic transmission in terms of shift quality. The same form of pressure for the clutch and the input current are required for an ideal control. However, the gap between a pressure and a current can occur which brings a delay in a transmission and a decrease in quality. This problem is caused by hysteresis phenomenon. As the ascending or descending magnetic field is applied to the solenoid, different thrust forces are generated. This paper suggests the calculation method of the thrust force considering the hysteresis phenomenon and consequently the accurate force can be obtained. Such hysteresis occurs in ferromagnetic materials, however the hysteresis phenomenon includes a minor hysteresis loop which begins with an initial magnetization curve and is generated by DC biased field density. As the core of the solenoid is ferromagnetic material, an accurate thrust force is obtained by applying the minor hysteresis loop compared to the force calculated by considering only the initial magnetization curve. An analytical background and the detailed explanation of measuring the minor hysteresis loop are presented. Furthermore experimental results and finite element analysis results are compared for the verification.

  7. Magnetorheological rotational flow with viscous dissipation

    NASA Astrophysics Data System (ADS)

    Ashrafi, Nariman

    2017-11-01

    Effects of a magnetic field and fluid nonlinearity are investigated for the rotational flow of the Carreau-type fluid while viscous dissipation is taken into account. The governing motion and energy balance equations are coupled, adding complexity to the already highly correlated set of differential equations. The numerical solution is obtained for the narrow-gap limit and steady-state base flow. Magnetic field effect on local entropy generation due to steady two-dimensional laminar forced convection flow was investigated. This study was focused on the entropy generation characteristics and its dependency on various dimensionless parameters. The effects of the Hartmann number, the Brinkman number, and the Deborah number on the stability of the flow were investigated. The introduction of the magnetic field induces a resistive force acting in the opposite direction of the flow, thus causing its deceleration. Moreover, the study shows that the presence of magnetic field tends to slow down the fluid motion. It, however, increases the fluid temperature. Moreover, the total entropy generation number decreases as the Hartmann number and fluid elasticity increase and increases with increasing Brinkman number.

  8. Correct folding of an α-helix and a β-hairpin using a polarized 2D torsional potential

    PubMed Central

    Gao, Ya; Li, Yongxiu; Mou, Lirong; Lin, Bingbing; Zhang, John Z. H.; Mei, Ye

    2015-01-01

    A new modification to the AMBER force field that incorporates the coupled two-dimensional main chain torsion energy has been evaluated for the balanced representation of secondary structures. In this modified AMBER force field (AMBER032D), the main chain torsion energy is represented by 2-dimensional Fourier expansions with parameters fitted to the potential energy surface generated by high-level quantum mechanical calculations of small peptides in solution. Molecular dynamics simulations are performed to study the folding of two model peptides adopting either α-helix or β-hairpin structures. Both peptides are successfully folded into their native structures using an AMBER032D force field with the implementation of a polarization scheme (AMBER032Dp). For comparison, simulations using a standard AMBER03 force field with and without polarization, as well as AMBER032D without polarization, fail to fold both peptides successfully. The correction to secondary structure propensity in the AMBER03 force field and the polarization effect are critical to folding Trpzip2; without these factors, a helical structure is obtained. This study strongly suggests that this new force field is capable of providing a more balanced preference for helical and extended conformations. The electrostatic polarization effect is shown to be indispensable to the growth of secondary structures. PMID:26039188

  9. A universal strategy for the creation of machine learning-based atomistic force fields

    NASA Astrophysics Data System (ADS)

    Huan, Tran Doan; Batra, Rohit; Chapman, James; Krishnan, Sridevi; Chen, Lihua; Ramprasad, Rampi

    2017-09-01

    Emerging machine learning (ML)-based approaches provide powerful and novel tools to study a variety of physical and chemical problems. In this contribution, we outline a universal strategy to create ML-based atomistic force fields, which can be used to perform high-fidelity molecular dynamics simulations. This scheme involves (1) preparing a big reference dataset of atomic environments and forces with sufficiently low noise, e.g., using density functional theory or higher-level methods, (2) utilizing a generalizable class of structural fingerprints for representing atomic environments, (3) optimally selecting diverse and non-redundant training datasets from the reference data, and (4) proposing various learning approaches to predict atomic forces directly (and rapidly) from atomic configurations. From the atomistic forces, accurate potential energies can then be obtained by appropriate integration along a reaction coordinate or along a molecular dynamics trajectory. Based on this strategy, we have created model ML force fields for six elemental bulk solids, including Al, Cu, Ti, W, Si, and C, and show that all of them can reach chemical accuracy. The proposed procedure is general and universal, in that it can potentially be used to generate ML force fields for any material using the same unified workflow with little human intervention. Moreover, the force fields can be systematically improved by adding new training data progressively to represent atomic environments not encountered previously.

  10. Apparatus for separating particles utilizing engineered acoustic contrast capture particles

    DOEpatents

    Kaduchak, Gregory; Ward, Michael D

    2014-10-21

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minima for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.

  11. Apparatus for separating particles utilizing engineered acoustic contrast capture particles

    DOEpatents

    Kaduchak, Gregory [Los Alamos, NM; Ward, Michael D [Los Alamos, NM

    2011-12-27

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minima for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.

  12. Higher-order force moments of active particles

    NASA Astrophysics Data System (ADS)

    Nasouri, Babak; Elfring, Gwynn J.

    2018-04-01

    Active particles moving through fluids generate disturbance flows due to their activity. For simplicity, the induced flow field is often modeled by the leading terms in a far-field approximation of the Stokes equations, whose coefficients are the force, torque, and stresslet (zeroth- and first-order force moments) of the active particle. This level of approximation is quite useful, but may also fail to predict more complex behaviors that are observed experimentally. In this study, to provide a better approximation, we evaluate the contribution of the second-order force moments to the flow field and, by reciprocal theorem, present explicit formulas for the stresslet dipole, rotlet dipole, and potential dipole for an arbitrarily shaped active particle. As examples of this method, we derive modified Faxén laws for active spherical particles and resolve higher-order moments for active rod-like particles.

  13. Thermal to electricity conversion using thermal magnetic properties

    DOEpatents

    West, Phillip B [Idaho Falls, ID; Svoboda, John [Idaho Falls, ID

    2010-04-27

    A system for the generation of Electricity from Thermal Energy using the thermal magnetic properties of a Ferromagnetic, Electrically Conductive Material (FECM) in one or more Magnetic Fields. A FECM is exposed to one or more Magnetic Fields. Thermal Energy is applied to a portion of the FECM heating the FECM above its Curie Point. The FECM, now partially paramagnetic, moves under the force of the one or more Magnetic Fields. The movement of the FECM induces an electrical current through the FECM, generating Electricity.

  14. Lorentz force on sodium and chlorine ions in a salt water solution flow under a transverse magnetic field

    NASA Astrophysics Data System (ADS)

    DeLuca, R.

    2009-05-01

    It is shown that, by applying elementary concepts in electromagnetism and electrochemistry to a system consisting of salt water flowing in a thin rectangular pipe at an average velocity vA under the influence of a transverse magnetic field B0, an electromotive force generator can be conceived. In fact, the Lorentz force acting on the sodium and chlorine ions in a water solution gives rise to a so-called Faraday voltage across the two metal electrodes, positioned at the sides of the pipe. The effect is carried along the following chemical reactions at the electrodes: at the cathode, water is reduced (instead of sodium ions) and hydrogen gas is generated; at the anode, chlorine gas is produced. In college physics teaching, this interdisciplinary subject can be adopted to stress analogies and differences between the Hall voltage in conductors and the Faraday voltage in electrolyte solutions.

  15. Thermally and electrically controllable multiple high harmonics generation by harmonically driven quasi-two-dimensional electron gas

    NASA Astrophysics Data System (ADS)

    Maglevanny, I. I.; Smolar, V. A.; Karyakina, T. I.

    2018-06-01

    In this paper, we consider the activation processes in nonlinear meta-stable system based on a lateral (quasi-two-dimensional) superlattice and study the dynamics of such a system externally driven by a harmonic force. The internal control parameters are the longitudinal applied electric field and the sample temperature. The spontaneous transverse electric field is considered as an order parameter. The forced violations of order parameter are considered as a response of a system to periodic driving. We investigate the cooperative effects of self-organization and high harmonic forcing from the viewpoint of catastrophe theory and show the possibility of generation of third and higher odd harmonics in output signal that lead to distortion of its wave front. A higher harmonics detection strategy is further proposed and explained in detail by exploring the influences of system parameters on the response output of the system that are discussed through numerical simulations.

  16. High harmonic interferometry of the Lorentz force in strong mid-infrared laser fields

    NASA Astrophysics Data System (ADS)

    Pisanty, Emilio; Hickstein, Daniel D.; Galloway, Benjamin R.; Durfee, Charles G.; Kapteyn, Henry C.; Murnane, Margaret M.; Ivanov, Misha

    2018-05-01

    The interaction of intense mid-infrared laser fields with atoms and molecules leads to a range of new opportunities, from the production of bright, coherent radiation in the soft x-ray range, to imaging molecular structures and dynamics with attosecond temporal and sub-angstrom spatial resolution. However, all these effects, which rely on laser-driven recollision of an electron removed by the strong laser field and its parent ion, suffer from the rapidly increasing role of the magnetic field component of the driving pulse: the associated Lorentz force pushes the electrons off course in their excursion and suppresses all recollision-based processes, including high harmonic generation as well as elastic and inelastic scattering. Here we show how the use of two non-collinear beams with opposite circular polarizations produces a forwards ellipticity which can be used to monitor, control, and cancel the effect of the Lorentz force. This arrangement can thus be used to re-enable recollision-based phenomena in regimes beyond the long-wavelength breakdown of the dipole approximation, and it can be used to observe this breakdown in high harmonic generation using currently available light sources.

  17. Perspectives on the simulation of protein–surface interactions using empirical force field methods

    PubMed Central

    Latour, Robert A.

    2014-01-01

    Protein–surface interactions are of fundamental importance for a broad range of applications in the fields of biomaterials and biotechnology. Present experimental methods are limited in their ability to provide a comprehensive depiction of these interactions at the atomistic level. In contrast, empirical force field based simulation methods inherently provide the ability to predict and visualize protein–surface interactions with full atomistic detail. These methods, however, must be carefully developed, validated, and properly applied before confidence can be placed in results from the simulations. In this perspectives paper, I provide an overview of the critical aspects that I consider being of greatest importance for the development of these methods, with a focus on the research that my combined experimental and molecular simulation groups have conducted over the past decade to address these issues. These critical issues include the tuning of interfacial force field parameters to accurately represent the thermodynamics of interfacial behavior, adequate sampling of these types of complex molecular systems to generate results that can be comparable with experimental data, and the generation of experimental data that can be used for simulation results evaluation and validation. PMID:25028242

  18. Quantitative modeling of forces in electromagnetic tweezers

    NASA Astrophysics Data System (ADS)

    Bijamov, Alex; Shubitidze, Fridon; Oliver, Piercen M.; Vezenov, Dmitri V.

    2010-11-01

    This paper discusses numerical simulations of the magnetic field produced by an electromagnet for generation of forces on superparamagnetic microspheres used in manipulation of single molecules or cells. Single molecule force spectroscopy based on magnetic tweezers can be used in applications that require parallel readout of biopolymer stretching or biomolecular binding. The magnetic tweezers exert forces on the surface-immobilized macromolecule by pulling a magnetic bead attached to the free end of the molecule in the direction of the field gradient. In a typical force spectroscopy experiment, the pulling forces can range between subpiconewton to tens of piconewtons. In order to effectively provide such forces, an understanding of the source of the magnetic field is required as the first step in the design of force spectroscopy systems. In this study, we use a numerical technique, the method of auxiliary sources, to investigate the influence of electromagnet geometry and material parameters of the magnetic core on the magnetic forces pulling the target beads in the area of interest. The close proximity of the area of interest to the magnet body results in deviations from intuitive relations between magnet size and pulling force, as well as in the force decay with distance. We discuss the benefits and drawbacks of various geometric modifications affecting the magnitude and spatial distribution of forces achievable with an electromagnet.

  19. Numerical simulations of current generation and dynamo excitation in a mechanically forced turbulent flow.

    PubMed

    Bayliss, R A; Forest, C B; Nornberg, M D; Spence, E J; Terry, P W

    2007-02-01

    The role of turbulence in current generation and self-excitation of magnetic fields has been studied in the geometry of a mechanically driven, spherical dynamo experiment, using a three-dimensional numerical computation. A simple impeller model drives a flow that can generate a growing magnetic field, depending on the magnetic Reynolds number Rm=micro0sigmaVa and the fluid Reynolds number Re=Vanu of the flow. For Re<420, the flow is laminar and the dynamo transition is governed by a threshold of Rmcrit=100, above which a growing magnetic eigenmode is observed that is primarily a dipole field transverse to the axis of symmetry of the flow. In saturation, the Lorentz force slows the flow such that the magnetic eigenmode becomes marginally stable. For Re>420 and Rm approximately 100 the flow becomes turbulent and the dynamo eigenmode is suppressed. The mechanism of suppression is a combination of a time varying large-scale field and the presence of fluctuation driven currents (such as those predicted by the mean-field theory), which effectively enhance the magnetic diffusivity. For higher Rm, a dynamo reappears; however, the structure of the magnetic field is often different from the laminar dynamo. It is dominated by a dipolar magnetic field aligned with the axis of symmetry of the mean-flow, which is apparently generated by fluctuation-driven currents. The magnitude and structure of the fluctuation-driven currents have been studied by applying a weak, axisymmetric seed magnetic field to laminar and turbulent flows. An Ohm's law analysis of the axisymmetric currents allows the fluctuation-driven currents to be identified. The magnetic fields generated by the fluctuations are significant: a dipole moment aligned with the symmetry axis of the mean-flow is generated similar to those observed in the experiment, and both toroidal and poloidal flux expulsion are observed.

  20. Floating electrode dielectrophoresis.

    PubMed

    Golan, Saar; Elata, David; Orenstein, Meir; Dinnar, Uri

    2006-12-01

    In practice, dielectrophoresis (DEP) devices are based on micropatterned electrodes. When subjected to applied voltages, the electrodes generate nonuniform electric fields that are necessary for the DEP manipulation of particles. In this study, electrically floating electrodes are used in DEP devices. It is demonstrated that effective DEP forces can be achieved by using floating electrodes. Additionally, DEP forces generated by floating electrodes are different from DEP forces generated by excited electrodes. The floating electrodes' capabilities are explained theoretically by calculating the electric field gradients and demonstrated experimentally by using test-devices. The test-devices show that floating electrodes can be used to collect erythrocytes (red blood cells). DEP devices which contain many floating electrodes ought to have fewer connections to external signal sources. Therefore, the use of floating electrodes may considerably facilitate the fabrication and operation of DEP devices. It can also reduce device dimensions. However, the key point is that DEP devices can integrate excited electrodes fabricated by microtechnology processes and floating electrodes fabricated by nanotechnology processes. Such integration is expected to promote the use of DEP devices in the manipulation of nanoparticles.

  1. Engines for the Cosmos

    NASA Technical Reports Server (NTRS)

    Rodgers, Stephen L.; Reisz, Al; Wyckoff, James (Technical Monitor)

    2002-01-01

    Galactic forces spiral across the cosmos fueled by nuclear fission and fusion and atoms in plasmatic states with throes of constraints of gravitational forces and magnetic fields, In their wanderings these galaxies spew light, radiation, atomic and subatomic particles throughout the universe. Throughout the ages of man visions of journeying through the stars have been wondered. If humans and human devices from Earth are to go beyond the Moon and journey into deep space, it must be accomplished with like forces of the cosmos such as electrical fields, magnetic fields, ions, electrons and energies generated from the manipulation of subatomic and atomic particles. Forms of electromagnetic waves such as light, radio waves and lasers must control deep space engines. We won't get far on our Earth accustomed hydrocarbon fuels.

  2. Gradiometry and gravitomagnetic field detection

    NASA Technical Reports Server (NTRS)

    Mashhoon, Bahram

    1989-01-01

    Gravitomagnetism was apparently first introduced into physics about 120 years ago when major developments in electrodynamics and the strong similarity between Coulomb's law of electricity and Newton's law of gravity led to the hypothesis that mass current generates a fundamental force of gravitational origin analogous to the magnetic force caused by charge current. According to general relativity, the rotation of a body leads to the dragging of the local inertial frames. In the weak-field approximation, the dragging frequency can be interpreted, up to a constant proportionality factor, as a gravitational magnetic field. There is, as yet, no direct evidence regarding the existence of such a field. The possibility is examined of detecting the gravitomagnetic field of the Earth by gravity gradiometry.

  3. Unsteady hydrodynamic forces acting on a robotic arm and its flow field: application to the crawl stroke.

    PubMed

    Takagi, Hideki; Nakashima, Motomu; Ozaki, Takashi; Matsuuchi, Kazuo

    2014-04-11

    This study aims to clarify the mechanisms by which unsteady hydrodynamic forces act on the hand of a swimmer during a crawl stroke. Measurements were performed for a hand attached to a robotic arm with five degrees of freedom independently controlled by a computer. The computer was programmed so the hand and arm mimicked a human performing the stroke. We directly measured forces on the hand and pressure distributions around it at 200 Hz; flow fields underwater near the hand were obtained via 2D particle image velocimetry (PIV). The data revealed two mechanisms that generate unsteady forces during a crawl stroke. One is the unsteady lift force generated when hand movement changes direction during the stroke, leading to vortex shedding and bound vortex created around it. This bound vortex circulation results in a lift that contributes to the thrust. The other occurs when the hand moves linearly with a large angle of attack, creating a Kármán vortex street. This street alternatively sheds clockwise and counterclockwise vortices, resulting in a quasi-steady drag contributing to the thrust. We presume that professional swimmers benefit from both mechanisms. Further studies are necessary in which 3D flow fields are measured using a 3D PIV system and a human swimmer. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Elongated Nanoparticle Aggregates in Cancer Cells for Mechanical Destruction with Low Frequency Rotating Magnetic Field.

    PubMed

    Shen, Yajing; Wu, Congyu; Uyeda, Taro Q P; Plaza, Gustavo R; Liu, Bin; Han, Yu; Lesniak, Maciej S; Cheng, Yu

    2017-01-01

    Magnetic nanoparticles (MNPs) functionalized with targeting moieties can recognize specific cell components and induce mechanical actuation under magnetic field. Their size is adequate for reaching tumors and targeting cancer cells. However, due to the nanometric size, the force generated by MNPs is smaller than the force required for largely disrupting key components of cells. Here, we show the magnetic assembly process of the nanoparticles inside the cells, to form elongated aggregates with the size required to produce elevated mechanical forces. We synthesized iron oxide nanoparticles doped with zinc, to obtain high magnetization, and functionalized with the epidermal growth factor (EGF) peptide for targeting cancer cells. Under a low frequency rotating magnetic field at 15 Hz and 40 mT, the internalized EGF-MNPs formed elongated aggregates and generated hundreds of pN to dramatically damage the plasma and lysosomal membranes. The physical disruption, including leakage of lysosomal hydrolases into the cytosol, led to programmed cell death and necrosis. Our work provides a novel strategy of designing magnetic nanomedicines for mechanical destruction of cancer cells.

  5. Elongated Nanoparticle Aggregates in Cancer Cells for Mechanical Destruction with Low Frequency Rotating Magnetic Field

    PubMed Central

    Shen, Yajing; Wu, Congyu; Uyeda, Taro Q. P.; Plaza, Gustavo R.; Liu, Bin; Han, Yu; Lesniak, Maciej S.; Cheng, Yu

    2017-01-01

    Magnetic nanoparticles (MNPs) functionalized with targeting moieties can recognize specific cell components and induce mechanical actuation under magnetic field. Their size is adequate for reaching tumors and targeting cancer cells. However, due to the nanometric size, the force generated by MNPs is smaller than the force required for largely disrupting key components of cells. Here, we show the magnetic assembly process of the nanoparticles inside the cells, to form elongated aggregates with the size required to produce elevated mechanical forces. We synthesized iron oxide nanoparticles doped with zinc, to obtain high magnetization, and functionalized with the epidermal growth factor (EGF) peptide for targeting cancer cells. Under a low frequency rotating magnetic field at 15 Hz and 40 mT, the internalized EGF-MNPs formed elongated aggregates and generated hundreds of pN to dramatically damage the plasma and lysosomal membranes. The physical disruption, including leakage of lysosomal hydrolases into the cytosol, led to programmed cell death and necrosis. Our work provides a novel strategy of designing magnetic nanomedicines for mechanical destruction of cancer cells. PMID:28529648

  6. An Empirical Polarizable Force Field Based on the Classical Drude Oscillator Model: Development History and Recent Applications

    PubMed Central

    2016-01-01

    Molecular mechanics force fields that explicitly account for induced polarization represent the next generation of physical models for molecular dynamics simulations. Several methods exist for modeling induced polarization, and here we review the classical Drude oscillator model, in which electronic degrees of freedom are modeled by charged particles attached to the nuclei of their core atoms by harmonic springs. We describe the latest developments in Drude force field parametrization and application, primarily in the last 15 years. Emphasis is placed on the Drude-2013 polarizable force field for proteins, DNA, lipids, and carbohydrates. We discuss its parametrization protocol, development history, and recent simulations of biologically interesting systems, highlighting specific studies in which induced polarization plays a critical role in reproducing experimental observables and understanding physical behavior. As the Drude oscillator model is computationally tractable and available in a wide range of simulation packages, it is anticipated that use of these more complex physical models will lead to new and important discoveries of the physical forces driving a range of chemical and biological phenomena. PMID:26815602

  7. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bonthuis, Douwe Jan, E-mail: douwe.bonthuis@physics.ox.ac.uk; Mamatkulov, Shavkat I.; Netz, Roland R.

    We optimize force fields for H{sub 3}O{sup +} and OH{sup −} that reproduce the experimental solvation free energies and the activities of H{sub 3}O{sup +} Cl{sup −} and Na{sup +} OH{sup −} solutions up to concentrations of 1.5 mol/l. The force fields are optimized with respect to the partial charge on the hydrogen atoms and the Lennard-Jones parameters of the oxygen atoms. Remarkably, the partial charge on the hydrogen atom of the optimized H{sub 3}O{sup +} force field is 0.8 ± 0.1|e|—significantly higher than the value typically used for nonpolarizable water models and H{sub 3}O{sup +} force fields. In contrast,more » the optimal partial charge on the hydrogen atom of OH{sup −} turns out to be zero. Standard combination rules can be used for H{sub 3}O{sup +} Cl{sup −} solutions, while for Na{sup +} OH{sup −} solutions, we need to significantly increase the effective anion-cation Lennard-Jones radius. While highlighting the importance of intramolecular electrostatics, our results show that it is possible to generate thermodynamically consistent force fields without using atomic polarizability.« less

  8. Direct measurement of optical force induced by near-field plasmonic cavity using dynamic mode AFM

    DOE PAGES

    Guan, Dongshi; Hang, Zhi Hong; Marset, Zsolt; ...

    2015-11-20

    Plasmonic nanostructures have attracted much attention in recent years because of their potential applications in optical manipulation through near-field enhancement. Continuing experimental efforts have been made to develop accurate techniques to directly measure the near-field optical force induced by the plasmonic nanostructures in the visible frequency range. In this work, we report a new application of dynamic mode atomic force microscopy (DM-AFM) in the measurement of the enhanced optical force acting on a nano-structured plasmonic resonant cavity. The plasmonic cavity is made of an upper gold-coated glass sphere and a lower quartz substrate patterned with an array of subwavelength goldmore » disks. In the near-field when the sphere is positioned close to the disk array, plasmonic resonance is excited in the cavity and the induced force by a 1550 nm infrared laser is found to be increased by an order of magnitude compared with the photon pressure generated by the same laser light. Lastly, the experiment demonstrates that DM-AFM is a powerful tool for the study of light induced forces and their enhancement in plasmonic nanostructures.« less

  9. Lattice QCD with strong external electric fields.

    PubMed

    Yamamoto, Arata

    2013-03-15

    We study particle generation by a strong electric field in lattice QCD. To avoid the sign problem of the Minkowskian electric field, we adopt the "isospin" electric charge. When a strong electric field is applied, the insulating vacuum is broken down and pairs of charged particles are produced by the Schwinger mechanism. The competition against the color confining force is also discussed.

  10. Balancing the Interactions of Ions, Water, and DNA in the Drude Polarizable Force Field

    PubMed Central

    2015-01-01

    Recently we presented a first-generation all-atom Drude polarizable force field for DNA based on the classical Drude oscillator model, focusing on optimization of key dihedral angles followed by extensive validation of the force field parameters. Presently, we describe the procedure for balancing the electrostatic interactions between ions, water, and DNA as required for development of the Drude force field for DNA. The proper balance of these interactions is shown to impact DNA stability and subtler conformational properties, including the conformational equilibrium between the BI and BII states, and the A and B forms of DNA. The parametrization efforts were simultaneously guided by gas-phase quantum mechanics (QM) data on small model compounds and condensed-phase experimental data on the hydration and osmotic properties of biologically relevant ions and their solutions, as well as theoretical predictions for ionic distribution around DNA oligomer. In addition, fine-tuning of the internal base parameters was performed to obtain the final DNA model. Notably, the Drude model is shown to more accurately reproduce counterion condensation theory predictions of DNA charge neutralization by the condensed ions as compared to the CHARMM36 additive DNA force field, indicating an improved physical description of the forces dictating the ionic solvation of DNA due to the explicit treatment of electronic polarizability. In combination with the polarizable DNA force field, the availability of Drude polarizable parameters for proteins, lipids, and carbohydrates will allow for simulation studies of heterogeneous biological systems. PMID:24874104

  11. Structural frequency functions for an impulsive, distributed forcing function

    NASA Technical Reports Server (NTRS)

    Bateman, Vesta I.

    1987-01-01

    The response of a penetrator structure to a spatially distributed mechanical impulse with a magnitude approaching field test force levels (1-2 Mlb) were measured. The frequency response function calculated from the response to this unique forcing function is compared to frequency response functions calculated from response to point forces of about 2000 pounds. The results show that the strain gages installed on the penetrator case respond similiarly to a point, axial force and to a spatially distributed, axial force. This result suggests that the distributed axial force generated in a penetration event may be reconstructed as a point axial force when the penetrator behaves in linear manner.

  12. Polymer coating of glass microballoons levitated in a focused acoustic field

    NASA Technical Reports Server (NTRS)

    Young, A. T.; Lee, M. C.; Feng, I.-A.; Elleman, D. D.; Wang, T. G.

    1982-01-01

    Inertial confinement fusion (ICF) glass microballoons (GMBs) levitated in a focusing radiator acoustic device can be coated with liquid materials by deploying the liquid into the levitation field with a stepped-horn atomizer. The GMB can be forced to the center of the coating liquid with a strong acoustically generated centering force. Water solutions of organic polymers, UV-curable liquid organic monomers, and paraffin waxes have been used to prepare solid coatings on the surface of GMBs using this technique.

  13. Cheap but accurate calculation of chemical reaction rate constants from ab initio data, via system-specific, black-box force fields

    NASA Astrophysics Data System (ADS)

    Steffen, Julien; Hartke, Bernd

    2017-10-01

    Building on the recently published quantum-mechanically derived force field (QMDFF) and its empirical valence bond extension, EVB-QMDFF, it is now possible to generate a reliable potential energy surface for any given elementary reaction step in an essentially black box manner. This requires a limited and pre-defined set of reference data near the reaction path and generates an accurate approximation of the reference potential energy surface, on and off the reaction path. This intermediate representation can be used to generate reaction rate data, with far better accuracy and reliability than with traditional approaches based on transition state theory (TST) or variational extensions thereof (VTST), even if those include sophisticated tunneling corrections. However, the additional expense at the reference level remains very modest. We demonstrate all this for three arbitrarily chosen example reactions.

  14. Use of magnetic sails for advanced exploration missions

    NASA Technical Reports Server (NTRS)

    Andrews, Dana G.; Zubrin, Robert M.

    1990-01-01

    The magnetic sail, or magsail, is a field effect device which interacts with the ambient solar wind or interstellar medium over a considerable volume of space to generate drag and lift forces. Two theories describing the method of thrust generation are analyzed and data results are presented. The techniques for maintaining superconductor temperatures in interplanetary space are analyzed and low risk options presented. Comparisons are presented showing mission performance differences between currently proposed spacecraft using chemical and electric propulsion systems, and a Magsail propelled spacecraft capable of generating an average thrust of 250 Newtons at a radius of one A.U. The magsail also provides unique capabilities for interstellar missions, in that at relativistic speeds the magnetic field would ionize and deflect the interstellar medium producing a large drag force. This would make it an ideal brake for decelerating a spacecraft from relativistic speeds and then maneuvering within the target star system.

  15. pmx: Automated protein structure and topology generation for alchemical perturbations

    PubMed Central

    Gapsys, Vytautas; Michielssens, Servaas; Seeliger, Daniel; de Groot, Bert L

    2015-01-01

    Computational protein design requires methods to accurately estimate free energy changes in protein stability or binding upon an amino acid mutation. From the different approaches available, molecular dynamics-based alchemical free energy calculations are unique in their accuracy and solid theoretical basis. The challenge in using these methods lies in the need to generate hybrid structures and topologies representing two physical states of a system. A custom made hybrid topology may prove useful for a particular mutation of interest, however, a high throughput mutation analysis calls for a more general approach. In this work, we present an automated procedure to generate hybrid structures and topologies for the amino acid mutations in all commonly used force fields. The described software is compatible with the Gromacs simulation package. The mutation libraries are readily supported for five force fields, namely Amber99SB, Amber99SB*-ILDN, OPLS-AA/L, Charmm22*, and Charmm36. PMID:25487359

  16. Systems and methods for separating particles utilizing engineered acoustic contrast capture particles

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kaduchak, Gregory; Ward, Michael D.

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minimamore » for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.« less

  17. Apparatus for separating particles utilizing engineered acoustic contrast capture particles

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kaduchak, Gregory; Ward, Michael D

    An apparatus for separating particles from a medium includes a capillary defining a flow path therein that is in fluid communication with a medium source. The medium source includes engineered acoustic contrast capture particle having a predetermined acoustic contrast. The apparatus includes a vibration generator that is operable to produce at least one acoustic field within the flow path. The acoustic field produces a force potential minima for positive acoustic contrast particles and a force potential minima for negative acoustic contrast particles in the flow path and drives the engineered acoustic contrast capture particles to either the force potential minimamore » for positive acoustic contrast particles or the force potential minima for negative acoustic contrast particles.« less

  18. Mean electromotive force generated by asymmetric fluid flow near the surface of earth's outer core

    NASA Astrophysics Data System (ADS)

    Bhattacharyya, Archana

    1992-10-01

    The phi component of the mean electromotive force, (ETF) generated by asymmetric flow of fluid just beneath the core-mantle boundary (CMB), is obtained using a geomagnetic field model. This analysis is based on the supposition that the axisymmetric part of fluid flow beneath the CMB is tangentially geostrophic and toroidal. For all the epochs studied, the computed phi component is stronger in the Southern Hemisphere than that in the Northern Hemisphere. Assuming a linear relationship between (ETF) and the azimuthally averaged magnetic field (AAMF), the only nonzero off-diagonal components of the pseudotensor relating ETF to AAMF, are estimated as functions of colatitude, and the physical implications of the results are discussed.

  19. An oppositely charged insect exclusion screen with gap-free multiple electric fields

    NASA Astrophysics Data System (ADS)

    Matsuda, Yoshinori; Kakutani, Koji; Nonomura, Teruo; Kimbara, Junji; Kusakari, Shin-ichi; Osamura, Kazumi; Toyoda, Hideyoshi

    2012-12-01

    An electric field screen was constructed to examine insect attraction mechanisms in multiple electric fields generated inside the screen. The screen consisted of two parallel insulated conductor wires (ICWs) charged with equal but opposite voltages and two separate grounded nets connected to each other and placed on each side of the ICW layer. Insects released inside the fields were charged either positively or negatively as a result of electricity flow from or to the insect, respectively. The force generated between the charged insects and opposite ICW charges was sufficient to capture all insects.

  20. Integration of Research for an Exhaust Thermoelectric Generator and the Outer Flow Field of a Car

    NASA Astrophysics Data System (ADS)

    Jiang, T.; Su, C. Q.; Deng, Y. D.; Wang, Y. P.

    2017-05-01

    The exhaust thermoelectric generator (TEG) can generate electric power from a car engine's waste heat. It is important to maintain a sufficient temperature difference across the thermoelectric modules. The radiator is connected to the cooling units of the thermoelectric modules and used to take away the heat from the TEG system. This paper focuses on the research for the integration of a TEG radiator and the flow field of the car chassis, aiming to cool the radiator by the high speed flow around the chassis. What is more, the TEG radiator is designed as a spoiler to optimize the flow field around the car chassis and even reduce the aerodynamic drag. Concentrating on the flow pressure of the radiator and the aerodynamic drag force, a sedan model with eight different schemes of radiator configurations are studied by computational fluid dynamics simulation. Finally, the simulation results indicate that a reasonable radiator configuration can not only generate high flow pressure to improve the cooling performance, which provides a better support for the TEG system, but also acts as a spoiler to reduce the aerodynamic drag force.

  1. Parametrization of Backbone Flexibility in a Coarse-Grained Force Field for Proteins (COFFDROP) Derived from All-Atom Explicit-Solvent Molecular Dynamics Simulations of All Possible Two-Residue Peptides.

    PubMed

    Frembgen-Kesner, Tamara; Andrews, Casey T; Li, Shuxiang; Ngo, Nguyet Anh; Shubert, Scott A; Jain, Aakash; Olayiwola, Oluwatoni J; Weishaar, Mitch R; Elcock, Adrian H

    2015-05-12

    Recently, we reported the parametrization of a set of coarse-grained (CG) nonbonded potential functions, derived from all-atom explicit-solvent molecular dynamics (MD) simulations of amino acid pairs and designed for use in (implicit-solvent) Brownian dynamics (BD) simulations of proteins; this force field was named COFFDROP (COarse-grained Force Field for Dynamic Representations Of Proteins). Here, we describe the extension of COFFDROP to include bonded backbone terms derived from fitting to results of explicit-solvent MD simulations of all possible two-residue peptides containing the 20 standard amino acids, with histidine modeled in both its protonated and neutral forms. The iterative Boltzmann inversion (IBI) method was used to optimize new CG potential functions for backbone-related terms by attempting to reproduce angle, dihedral, and distance probability distributions generated by the MD simulations. In a simple test of the transferability of the extended force field, the angle, dihedral, and distance probability distributions obtained from BD simulations of 56 three-residue peptides were compared to results from corresponding explicit-solvent MD simulations. In a more challenging test of the COFFDROP force field, it was used to simulate eight intrinsically disordered proteins and was shown to quite accurately reproduce the experimental hydrodynamic radii (Rhydro), provided that the favorable nonbonded interactions of the force field were uniformly scaled downward in magnitude. Overall, the results indicate that the COFFDROP force field is likely to find use in modeling the conformational behavior of intrinsically disordered proteins and multidomain proteins connected by flexible linkers.

  2. Ocean Wave Simulation Based on Wind Field

    PubMed Central

    2016-01-01

    Ocean wave simulation has a wide range of applications in movies, video games and training systems. Wind force is the main energy resource for generating ocean waves, which are the result of the interaction between wind and the ocean surface. While numerous methods to handle simulating oceans and other fluid phenomena have undergone rapid development during the past years in the field of computer graphic, few of them consider to construct ocean surface height field from the perspective of wind force driving ocean waves. We introduce wind force to the construction of the ocean surface height field through applying wind field data and wind-driven wave particles. Continual and realistic ocean waves result from the overlap of wind-driven wave particles, and a strategy was proposed to control these discrete wave particles and simulate an endless ocean surface. The results showed that the new method is capable of obtaining a realistic ocean scene under the influence of wind fields at real time rates. PMID:26808718

  3. Ocean Wave Simulation Based on Wind Field.

    PubMed

    Li, Zhongyi; Wang, Hao

    2016-01-01

    Ocean wave simulation has a wide range of applications in movies, video games and training systems. Wind force is the main energy resource for generating ocean waves, which are the result of the interaction between wind and the ocean surface. While numerous methods to handle simulating oceans and other fluid phenomena have undergone rapid development during the past years in the field of computer graphic, few of them consider to construct ocean surface height field from the perspective of wind force driving ocean waves. We introduce wind force to the construction of the ocean surface height field through applying wind field data and wind-driven wave particles. Continual and realistic ocean waves result from the overlap of wind-driven wave particles, and a strategy was proposed to control these discrete wave particles and simulate an endless ocean surface. The results showed that the new method is capable of obtaining a realistic ocean scene under the influence of wind fields at real time rates.

  4. Modification and optimization of the united-residue (UNRES) potential-energy function for canonical simulations. I. Temperature dependence of the effective energy function and tests of the optimization method with single training proteins

    PubMed Central

    Liwo, Adam; Khalili, Mey; Czaplewski, Cezary; Kalinowski, Sebastian; Ołdziej, Stanisław; Wachucik, Katarzyna; Scheraga, Harold A.

    2011-01-01

    We report the modification and parameterization of the united-residue (UNRES) force field for energy-based protein-structure prediction and protein-folding simulations. We tested the approach on three training proteins separately: 1E0L (β), 1GAB (α), and 1E0G (α + β). Heretofore, the UNRES force field had been designed and parameterized to locate native-like structures of proteins as global minima of their effective potential-energy surfaces, which largely neglected the conformational entropy because decoys composed of only lowest-energy conformations were used to optimize the force field. Recently, we developed a mesoscopic dynamics procedure for UNRES, and applied it with success to simulate protein folding pathways. How ever, the force field turned out to be largely biased towards α-helical structures in canonical simulations because the conformational entropy had been neglected in the parameterization. We applied the hierarchical optimization method developed in our earlier work to optimize the force field, in which the conformational space of a training protein is divided into levels each corresponding to a certain degree of native-likeness. The levels are ordered according to increasing native-likeness; level 0 corresponds to structures with no native-like elements and the highest level corresponds to the fully native-like structures. The aim of optimization is to achieve the order of the free energies of levels, decreasing as their native-likeness increases. The procedure is iterative, and decoys of the training protein(s) generated with the energy-function parameters of the preceding iteration are used to optimize the force field in a current iteration. We applied the multiplexing replica exchange molecular dynamics (MREMD) method, recently implemented in UNRES, to generate decoys; with this modification, conformational entropy is taken into account. Moreover, we optimized the free-energy gaps between levels at temperatures corresponding to a predominance of folded or unfolded structures, as well as to structures at the putative folding-transition temperature, changing the sign of the gaps at the transition temperature. This enabled us to obtain force fields characterized by a single peak in the heat capacity at the transition temperature. Furthermore, we introduced temperature dependence to the UNRES force field; this is consistent with the fact that it is a free-energy and not a potential-energy function. PMID:17201450

  5. Tokamak with in situ magnetohydrodynamic generation of toroidal magnetic field

    DOEpatents

    Schaffer, Michael J.

    1986-01-01

    A tokamak apparatus includes an electrically conductive metal pressure vessel for defining a chamber and confining liquid therein. A liner disposed within said chamber defines a toroidal space within the liner and confines gas therein. The metal vessel provides an electrically conductive path linking the toroidal space. Liquid metal is forced outwardly through the chamber outside of the toroidal space to generate electric current in the conductive path and thereby generate a toroidal magnetic field within the toroidal space. Toroidal plasma is developed within the toroidal space about the major axis thereof.

  6. Fabricating Atom-Sized Gaps by Field-Aided Atom Migration in Nanoscale Junctions

    NASA Astrophysics Data System (ADS)

    Liu, Ran; Bi, Jun-Jie; Xie, Zhen; Yin, Kaikai; Wang, Dunyou; Zhang, Guang-Ping; Xiang, Dong; Wang, Chuan-Kui; Li, Zong-Liang

    2018-05-01

    The gap sizes between electrodes generated by typical methods are generally much larger than the dimension of a common molecule when fabricating a single-molecule junction, which dramatically suppresses the yield of single-molecule junctions. Based on the ab initio calculations, we develop a strategy named the field-aided method to accurately fabricate an atomic-sized gap between gold nanoelectrodes. To understand the mechanism of this strategy, configuration evolutions of gold nanojunction in stretching and compressing processes are calculated. The numerical results show that, in the stretching process, the gold atoms bridged between two electrodes are likely to form atomic chains. More significantly, lattice vacant positions can be easily generated in stretching and compressing processes, which make field-aided gap generation possible. In field-aided atom migration (FAAM), the external field can exert driving force, enhance the initial energy of the system, and decrease the barrier in the migration path, which makes the atom migration feasible. Conductance and stretching and compressing forces, as measurable variables in stretching and compressing processes, present very useful signals for determining the time to perform FAAM. Following this desirable strategy, we successfully fabricate gold nanogaps with a dimension of 0.38 ±0.05 nm in the experiment, as our calculation simulates.

  7. Novel strategies in feedforward adaptation to a position-dependent perturbation.

    PubMed

    Hinder, Mark R; Milner, Theodore E

    2005-08-01

    To investigate the control mechanisms used in adapting to position-dependent forces, subjects performed 150 horizontal reaching movements over 25 cm in the presence of a position-dependent parabolic force field (PF). The PF acted only over the first 10 cm of the movement. On every fifth trial, a virtual mechanical guide (double wall) constrained subjects to move along a straight-line path between the start and target positions. Its purpose was to register lateral force to track formation of an internal model of the force field, and to look for evidence of possible alternative adaptive strategies. The force field produced a force to the right, which initially caused subjects to deviate in that direction. They reacted by producing deviations to the left, "into" the force field, as early as the second trial. Further adaptation resulted in rapid exponential reduction of kinematic error in the latter portion of the movement, where the greatest perturbation to the handpath was initially observed, whereas there was little modification of the handpath in the region where the PF was active. Significant force directed to counteract the PF was measured on the first guided trial, and was modified during the first half of the learning set. The total force impulse in the region of the PF increased throughout the learning trials, but it always remained less than that produced by the PF. The force profile did not resemble a mirror image of the PF in that it tended to be more trapezoidal than parabolic in shape. As in previous studies of force-field adaptation, we found that changes in muscle activation involved a general increase in the activity of all muscles, which increased arm stiffness, and selectively-greater increases in the activation of muscles which counteracted the PF. With training, activation was exponentially reduced, albeit more slowly than kinematic error. Progressive changes in kinematics and EMG occurred predominantly in the region of the workspace beyond the force field. We suggest that constraints on muscle mechanics limit the ability of the central nervous system to employ an inverse dynamics model to nullify impulse-like forces by generating mirror-image forces. Consequently, subjects adopted a strategy of slightly overcompensating for the first half of the force field, then allowing the force field to push them in the opposite direction. Muscle activity patterns in the region beyond the boundary of the force field were subsequently adjusted because of the relatively-slow response of the second-order mechanics of muscle impedance to the force impulse.

  8. ATK-ForceField: a new generation molecular dynamics software package

    NASA Astrophysics Data System (ADS)

    Schneider, Julian; Hamaekers, Jan; Chill, Samuel T.; Smidstrup, Søren; Bulin, Johannes; Thesen, Ralph; Blom, Anders; Stokbro, Kurt

    2017-12-01

    ATK-ForceField is a software package for atomistic simulations using classical interatomic potentials. It is implemented as a part of the Atomistix ToolKit (ATK), which is a Python programming environment that makes it easy to create and analyze both standard and highly customized simulations. This paper will focus on the atomic interaction potentials, molecular dynamics, and geometry optimization features of the software, however, many more advanced modeling features are available. The implementation details of these algorithms and their computational performance will be shown. We present three illustrative examples of the types of calculations that are possible with ATK-ForceField: modeling thermal transport properties in a silicon germanium crystal, vapor deposition of selenium molecules on a selenium surface, and a simulation of creep in a copper polycrystal.

  9. Permanent magnet system to guide superparamagnetic particles

    NASA Astrophysics Data System (ADS)

    Baun, Olga; Blümler, Peter

    2017-10-01

    A new concept of using permanent magnet systems for guiding superparamagnetic nano-particles on arbitrary trajectories over a large volume is proposed. The basic idea is to use one magnet system which provides a strong, homogeneous, dipolar magnetic field to magnetize and orient the particles, and a second constantly graded, quadrupolar field, superimposed on the first, to generate a force on the oriented particles. In this configuration the motion of the particles is driven predominantly by the component of the gradient field which is parallel to the direction of the homogeneous field. As a result, particles are guided with constant force and in a single direction over the entire volume. The direction is simply adjusted by varying the angle between quadrupole and dipole. Since a single gradient is impossible due to Gauß' law, the other gradient component of the quadrupole determines the angular deviation of the force. However, the latter can be neglected if the homogeneous field is stronger than the local contribution of the quadrupole field. A possible realization of this idea is a coaxial arrangement of two Halbach cylinders. A dipole to evenly magnetize and orient the particles, and a quadrupole to generate the force. The local force was calculated analytically for this particular geometry and the directional limits were analyzed and discussed. A simple prototype was constructed to demonstrate the principle in two dimensions on several nano-particles of different size, which were moved along a rough square by manual adjustment of the force angle. The observed velocities of superparamagnetic particles in this prototype were always several orders of magnitude higher than the theoretically expected value. This discrepancy is attributed to the observed formation of long particle chains as a result of their polarization by the homogeneous field. The magnetic moment of such a chain is then the combination of that of its constituents, while its hydrodynamic radius stays low. A complete system will consist of another quadrupole (third cylinder) to additionally enable scaling of the gradient/force strength by another rotation. In this configuration the device could then also be used as a simple MRI machine to image the particles between movement intervals. Finally, a concept is proposed by which superparamagnetic particles can be guided in three-dimensional space.

  10. Direct measurement of kilo-tesla level magnetic field generated with laser-driven capacitor-coil target by proton deflectometry

    NASA Astrophysics Data System (ADS)

    Law, K. F. F.; Bailly-Grandvaux, M.; Morace, A.; Sakata, S.; Matsuo, K.; Kojima, S.; Lee, S.; Vaisseau, X.; Arikawa, Y.; Yogo, A.; Kondo, K.; Zhang, Z.; Bellei, C.; Santos, J. J.; Fujioka, S.; Azechi, H.

    2016-02-01

    A kilo-tesla level, quasi-static magnetic field (B-field), which is generated with an intense laser-driven capacitor-coil target, was measured by proton deflectometry with a proper plasma shielding. Proton deflectometry is a direct and reliable method to diagnose strong, mm3-scale laser-produced B-field; however, this was not successful in the previous experiment. A target-normal-sheath-accelerated proton beam is deflected by Lorentz force in the laser-produced magnetic field with the resulting deflection pattern recorded on a radiochromic film stack. A 610 ± 30 T of B-field amplitude was inferred by comparing the experimental proton pattern with Monte-Carlo calculations. The amplitude and temporal evolutions of the laser-generated B-field were also measured by a differential magnetic probe, independently confirming the proton deflectometry measurement results.

  11. Analysis of eddy current induced in track on medium-low speed maglev train

    NASA Astrophysics Data System (ADS)

    Li, Guanchun; Jia, Zhen; He, Guang; Li, Jie

    2017-06-01

    Electromagnetic levitation (EMS) maglev train relies on the attraction between the electromagnets and rails which are mounted on the train to achieve suspension. During the movement, the magnetic field generated by the electromagnet will induce the eddy current in the orbit and the eddy current will weaken the suspended magnetic field. Which leads to the attenuation of the levitation force, the increases of suspension current and the degradation the suspension performance. In this paper, the influence of eddy current on the air gap magnetic field is solved by theoretical analysis, and the correction coefficient of air gap magnetic field is fitted according to the finite element data. The levitation force and current are calculated by the modified formula, and the velocity curves of the levitation force and current are obtained. The results show that the eddy current effect increases the load power by 61.9% in the case of heavy loads.

  12. Electromotive force and large-scale magnetic dynamo in a turbulent flow with a mean shear.

    PubMed

    Rogachevskii, Igor; Kleeorin, Nathan

    2003-09-01

    An effect of sheared large-scale motions on a mean electromotive force in a nonrotating turbulent flow of a conducting fluid is studied. It is demonstrated that in a homogeneous divergence-free turbulent flow the alpha effect does not exist, however a mean magnetic field can be generated even in a nonrotating turbulence with an imposed mean velocity shear due to a "shear-current" effect. A mean velocity shear results in an anisotropy of turbulent magnetic diffusion. A contribution to the electromotive force related to the symmetric parts of the gradient tensor of the mean magnetic field (the kappa effect) is found in nonrotating turbulent flows with a mean shear. The kappa effect and turbulent magnetic diffusion reduce the growth rate of the mean magnetic field. It is shown that a mean magnetic field can be generated when the exponent of the energy spectrum of the background turbulence (without the mean velocity shear) is less than 2. The shear-current effect was studied using two different methods: the tau approximation (the Orszag third-order closure procedure) and the stochastic calculus (the path integral representation of the solution of the induction equation, Feynman-Kac formula, and Cameron-Martin-Girsanov theorem). Astrophysical applications of the obtained results are discussed.

  13. Army Posture Statement: A Statement on the Posture of the United States Army, 2009

    DTIC Science & Technology

    2009-05-07

    Research Institute Army Physical Readiness Training (FM 3-22.02) Army Preparatory School Army Prepositioned Stocks (APS) Army Reserve Employer Relations...ARFORGEN Army Force Generation AFRICOM Africa Command AMAP Army Medical Action Plan AMC Army Material Command APA Army Prepositioned Stocks AR Army...Ordnance Disposal ES2 Every Soldier a Sensor ETF Enterprise Task Force FCS Future Combat Systems FM Field Manual FORSCOM Forces Command FY Fiscal Year

  14. Breakpoint-forced and bound long waves in the nearshore: A model comparison

    USGS Publications Warehouse

    List, Jeffrey H.; ,

    1993-01-01

    A finite-difference model is used to compare long wave amplitudes arising from two-group forced generation mechanisms in the nearshore: long waves generated at a time-varying breakpoint and the shallow-water extension of the bound long wave. Plane beach results demonstrate that the strong frequency selection in the outgoing wave predicted by the breakpoint-forcing mechanism may not be observable in field data due to this wave's relatively small size and its predicted phase relation with the bound wave. Over a bar/trough nearshore, it is shown that a strong frequency selection in shoreline amplitudes is not a unique result of the time-varying breakpoint model, but a general result of the interaction between topography and any broad-banded forcing of nearshore long waves.

  15. Reduced short term adaptation to robot generated dynamic environment in children affected by Cerebral Palsy.

    PubMed

    Masia, Lorenzo; Frascarelli, Flaminia; Morasso, Pietro; Di Rosa, Giuseppe; Petrarca, Maurizio; Castelli, Enrico; Cappa, Paolo

    2011-05-21

    It is known that healthy adults can quickly adapt to a novel dynamic environment, generated by a robotic manipulandum as a structured disturbing force field. We suggest that it may be of clinical interest to evaluate to which extent this kind of motor learning capability is impaired in children affected by cerebal palsy. We adapted the protocol already used with adults, which employs a velocity dependant viscous field, and compared the performance of a group of subjects affected by Cerebral Palsy (CP group, 7 subjects) with a Control group of unimpaired age-matched children. The protocol included a familiarization phase (FA), during which no force was applied, a force field adaptation phase (CF), and a wash-out phase (WO) in which the field was removed. During the CF phase the field was shut down in a number of randomly selected "catch" trials, which were used in order to evaluate the "learning index" for each single subject and the two groups. Lateral deviation, speed and acceleration peaks and average speed were evaluated for each trajectory; a directional analysis was performed in order to inspect the role of the limb's inertial anisotropy in the different experimental phases. During the FA phase the movements of the CP subjects were more curved, displaying greater and variable directional error; over the course of the CF phase both groups showed a decreasing trend in the lateral error and an after-effect at the beginning of the wash-out, but the CP group had a non significant adaptation rate and a lower learning index, suggesting that CP subjects have reduced ability to learn to compensate external force. Moreover, a directional analysis of trajectories confirms that the control group is able to better predict the force field by tuning the kinematic features of the movements along different directions in order to account for the inertial anisotropy of arm. Spatial abnormalities in children affected by cerebral palsy may be related not only to disturbance in motor control signals generating weakness and spasticity, but also to an inefficient control strategy which is not based on a robust knowledge of the dynamical features of their upper limb. This lack of information could be related to the congenital nature of the brain damage and may contribute to a better delineation of therapeutic intervention.

  16. Upper limits to submillimetre-range forces from extra space-time dimensions.

    PubMed

    Long, Joshua C; Chan, Hilton W; Churnside, Allison B; Gulbis, Eric A; Varney, Michael C M; Price, John C

    2003-02-27

    String theory is the most promising approach to the long-sought unified description of the four forces of nature and the elementary particles, but direct evidence supporting it is lacking. The theory requires six extra spatial dimensions beyond the three that we observe; it is usually supposed that these extra dimensions are curled up into small spaces. This 'compactification' induces 'moduli' fields, which describe the size and shape of the compact dimensions at each point in space-time. These moduli fields generate forces with strengths comparable to gravity, which according to some recent predictions might be detected on length scales of about 100 microm. Here we report a search for gravitational-strength forces using planar oscillators separated by a gap of 108 micro m. No new forces are observed, ruling out a substantial portion of the previously allowed parameter space for the strange and gluon moduli forces, and setting a new upper limit on the range of the string dilaton and radion forces.

  17. Convectively driven decadal zonal accelerations in Earth's fluid core

    NASA Astrophysics Data System (ADS)

    More, Colin; Dumberry, Mathieu

    2018-04-01

    Azimuthal accelerations of cylindrical surfaces co-axial with the rotation axis have been inferred to exist in Earth's fluid core on the basis of magnetic field observations and changes in the length-of-day. These accelerations have a typical timescale of decades. However, the physical mechanism causing the accelerations is not well understood. Scaling arguments suggest that the leading order torque averaged over cylindrical surfaces should arise from the Lorentz force. Decadal fluctuations in the magnetic field inside the core, driven by convective flows, could then force decadal changes in the Lorentz torque and generate zonal accelerations. We test this hypothesis by constructing a quasi-geostrophic model of magnetoconvection, with thermally driven flows perturbing a steady, imposed background magnetic field. We show that when the Alfvén number in our model is similar to that in Earth's fluid core, temporal fluctuations in the torque balance are dominated by the Lorentz torque, with the latter generating mean zonal accelerations. Our model reproduces both fast, free Alfvén waves and slow, forced accelerations, with ratios of relative strength and relative timescale similar to those inferred for the Earth's core. The temporal changes in the magnetic field which drive the time-varying Lorentz torque are produced by the underlying convective flows, shearing and advecting the magnetic field on a timescale associated with convective eddies. Our results support the hypothesis that temporal changes in the magnetic field deep inside Earth's fluid core drive the observed decadal zonal accelerations of cylindrical surfaces through the Lorentz torque.

  18. Further along the Road Less Traveled: AMBER ff15ipq, an Original Protein Force Field Built on a Self-Consistent Physical Model

    PubMed Central

    2016-01-01

    We present the AMBER ff15ipq force field for proteins, the second-generation force field developed using the Implicitly Polarized Q (IPolQ) scheme for deriving implicitly polarized atomic charges in the presence of explicit solvent. The ff15ipq force field is a complete rederivation including more than 300 unique atomic charges, 900 unique torsion terms, 60 new angle parameters, and new atomic radii for polar hydrogens. The atomic charges were derived in the context of the SPC/Eb water model, which yields more-accurate rotational diffusion of proteins and enables direct calculation of nuclear magnetic resonance (NMR) relaxation parameters from molecular dynamics simulations. The atomic radii improve the accuracy of modeling salt bridge interactions relative to contemporary fixed-charge force fields, rectifying a limitation of ff14ipq that resulted from its use of pair-specific Lennard-Jones radii. In addition, ff15ipq reproduces penta-alanine J-coupling constants exceptionally well, gives reasonable agreement with NMR relaxation rates, and maintains the expected conformational propensities of structured proteins/peptides, as well as disordered peptides—all on the microsecond (μs) time scale, which is a critical regime for drug design applications. These encouraging results demonstrate the power and robustness of our automated methods for deriving new force fields. All parameters described here and the mdgx program used to fit them are included in the AmberTools16 distribution. PMID:27399642

  19. Entropy generation minimization (EGM) of nanofluid flow by a thin moving needle with nonlinear thermal radiation

    NASA Astrophysics Data System (ADS)

    Waleed Ahmed Khan, M.; Ijaz Khan, M.; Hayat, T.; Alsaedi, A.

    2018-04-01

    Entropy generation minimization (EGM) and heat transport in nonlinear radiative flow of nanomaterials over a thin moving needle has been discussed. Nonlinear thermal radiation and viscous dissipation terms are merged in the energy expression. Water is treated as ordinary fluid while nanomaterials comprise titanium dioxide, copper and aluminum oxide. The nonlinear governing expressions of flow problems are transferred to ordinary ones and then tackled for numerical results by Built-in-shooting technique. In first section of this investigation, the entropy expression is derived as a function of temperature and velocity gradients. Geometrical and physical flow field variables are utilized to make it nondimensionalized. An entropy generation analysis is utilized through second law of thermodynamics. The results of temperature, velocity, concentration, surface drag force and heat transfer rate are explored. Our outcomes reveal that surface drag force and Nusselt number (heat transfer) enhanced linearly for higher nanoparticle volume fraction. Furthermore drag force decays for aluminum oxide and it enhances for copper nanoparticles. In addition, the lowest heat transfer rate is achieved for higher radiative parameter. Temperature field is enhanced with increase in temperature ratio parameter.

  20. 2001: Things to come.

    PubMed

    Apuzzo, M L; Liu, C Y

    2001-10-01

    THIS ARTICLE DISCUSSES elements in the definition of modernity and emerging futurism in neurological surgery. In particular, it describes evolution, discovery, and paradigm shifts in the field and forces responsible for their realization. It analyzes the cyclical reinvention of the discipline experienced during the past generation and attempts to identify apertures to the near and more remote future. Subsequently, it focuses on forces and discovery in computational science, imaging, molecular science, biomedical engineering, and information processing as they relate to the theme of minimalism that is evident in the field. These areas are explained in the light of future possibilities offered by the emerging field of nanotechnology with molecular engineering.

  1. Parameterization of backbone flexibility in a coarse-grained force field for proteins (COFFDROP) derived from all-atom explicit-solvent molecular dynamics simulations of all possible two-residue peptides

    PubMed Central

    Frembgen-Kesner, Tamara; Andrews, Casey T.; Li, Shuxiang; Ngo, Nguyet Anh; Shubert, Scott A.; Jain, Aakash; Olayiwola, Oluwatoni; Weishaar, Mitch R.; Elcock, Adrian H.

    2015-01-01

    Recently, we reported the parameterization of a set of coarse-grained (CG) nonbonded potential functions, derived from all-atom explicit-solvent molecular dynamics (MD) simulations of amino acid pairs, and designed for use in (implicit-solvent) Brownian dynamics (BD) simulations of proteins; this force field was named COFFDROP (COarse-grained Force Field for Dynamic Representations Of Proteins). Here, we describe the extension of COFFDROP to include bonded backbone terms derived from fitting to results of explicit-solvent MD simulations of all possible two-residue peptides containing the 20 standard amino acids, with histidine modeled in both its protonated and neutral forms. The iterative Boltzmann inversion (IBI) method was used to optimize new CG potential functions for backbone-related terms by attempting to reproduce angle, dihedral and distance probability distributions generated by the MD simulations. In a simple test of the transferability of the extended force field, the angle, dihedral and distance probability distributions obtained from BD simulations of 56 three-residue peptides were compared to results from corresponding explicit-solvent MD simulations. In a more challenging test of the COFFDROP force field, it was used to simulate eight intrinsically disordered proteins and was shown to quite accurately reproduce the experimental hydrodynamic radii (Rhydro), provided that the favorable nonbonded interactions of the force field were uniformly scaled downwards in magnitude. Overall, the results indicate that the COFFDROP force field is likely to find use in modeling the conformational behavior of intrinsically disordered proteins and multi-domain proteins connected by flexible linkers. PMID:26574429

  2. Assembly of Colloidal Aggregates by Electrohydrodynamic Flow: Kinetic Experiments and Scaling Analysis

    NASA Technical Reports Server (NTRS)

    Ristenpart, W. D.; Aksay, I. A.; Saville, D. A.

    2004-01-01

    Electric fields generate transverse flows near electrodes that sweep colloidal particles into densely packed assemblies. We interpret this behavior in terms of electrohydrodynamic motion stemming from distortions of the field by the particles that alter the body force distribution in the electrode charge polarization layer. A scaling analysis shows how the action of the applied electric field generates fluid motion that carries particles toward one another. The resulting fluid velocity is proportional to the square of the applied field and decreases inversely with frequency. Experimental measurements of the particle aggregation rate accord with the electrohydrodynamic theory over a wide range of voltages and frequencies.

  3. Characterization of an induced pressure pumping force for microfluidics

    NASA Astrophysics Data System (ADS)

    Jiang, Hai; Fan, Na; Peng, Bei; Weng, Xuan

    2017-05-01

    The electro-osmotic pumping and pressure-driven manipulation of fluids are considered as the most common strategies in microfluidic devices. However, both of them exhibit major disadvantages such as hard integration and high reagent consumption, and they are destructive methods for detection and photo bleaching. In this paper, an electric field-effect flow control approach, combining the electro-osmotic pumping force and the pressure-driven pumping force, was developed to generate the induced pressure-driven flow in a T-shaped microfluidic chip. Electro-osmotic flow between the T-intersection and two reservoirs was demonstrated, and it provided a stable, continuous, and electric field-free flow in the section of the microchannel without the electrodes. The velocity of the induced pressure-driven flow was linearly proportional to the applied voltages. Both numerical and experimental investigations were conducted to prove the concept, and the experimental results showed good agreement with the numerical simulations. In comparison to other induced pressure pumping methods, this approach can induce a high and controllable pressure drop in the electric field-free segment, subsequently causing an induced pressure-driven flow for transporting particles or biological cells. In addition, the generation of bubbles and the blocking of the microchannel are avoided.

  4. Numerical and experimental study of the effect of the induced electric potential in Lorentz force velocimetry

    NASA Astrophysics Data System (ADS)

    Hernández, Daniel; Boeck, Thomas; Karcher, Christian; Wondrak, Thomas

    2018-01-01

    Lorentz force velocimetry (LFV) is a contactless velocity measurement technique for electrically conducting fluids. When a liquid metal or a molten glass flows through an externally applied magnetic field, eddy currents and a flow-braking force are generated inside the liquid. This force is proportional to the velocity or flow rate of the fluid and, due to Newton’s third law, a force of the same magnitude but in opposite direction acts on the source of the applied magnetic field which in our case are permanent magnets. According to Ohm’s law for moving conductors at low magnetic Reynolds numbers, an electric potential is induced which ensures charge conservation. In this paper, we analyze the contribution of the induced electric potential to the total Lorentz force by considering two different scenarios: conducting walls of finite thickness and aspect ratio variation of the cross-section of the flow. In both the cases, the force component generated by the electric potential is always in the opposite direction to the total Lorentz force. This force component is sensitive to the electric boundary conditions of the flow of which insulating and perfectly conducting walls are the two limiting cases. In the latter case, the overall electric resistance of the system is minimized, resulting in a considerable increase in the measured Lorentz force. Additionally, this force originating from the electric potential also decays when the aspect ratio of the cross-section of the flow is changed. Hence, the sensitivity of the measurement technique is enhanced by either increasing wall conductivity or optimizing the aspect ratio of the cross-section of the flow.

  5. Probing cooperative force generation in collective cancer invasion

    NASA Astrophysics Data System (ADS)

    Alobaidi, Amani A.; Xu, Yaopengxiao; Chen, Shaohua; Jiao, Yang; Sun, Bo

    2017-08-01

    Collective cellular dynamics in the three-dimensional extracellular matrix (ECM) plays a crucial role in many physiological processes such as cancer invasion. Both chemical and mechanical signaling support cell-cell communications on a variety of length scales, leading to collective migratory behaviors. Here we conduct experiments using 3D in vitro tumor models and develop a phenomenological model in order to probe the cooperativity of force generation in the collective invasion of breast cancer cells. In our model, cell-cell communication is characterized by a single parameter that quantifies the correlation length of cellular migration cycles. We devise a stochastic reconstruction method to generate realizations of cell colonies with specific contraction phase correlation functions and correlation length a. We find that as a increases, the characteristic size of regions containing cells with similar contraction phases grows. For small a values, the large fluctuations in individual cell contraction phases smooth out the temporal fluctuations in the time-dependent deformation field in the ECM. For large a values, the periodicity of an individual cell contraction cycle is clearly manifested in the temporal variation of the overall deformation field in the ECM. Through quantitative comparisons of the simulated and experimentally measured deformation fields, we find that the correlation length for collective force generation in the breast cancer diskoid in geometrically micropatterned ECM (DIGME) system is a≈ 25~μ \\text{m} , which is roughly twice the linear size of a single cell. One possible mechanism for this intermediate cell correlation length is the fiber-mediated stress propagation in the 3D ECM network in the DIGME system.

  6. Trial-by-trial adaptation of movements during mental practice under force field.

    PubMed

    Anwar, Muhammad Nabeel; Khan, Salman Hameed

    2013-01-01

    Human nervous system tries to minimize the effect of any external perturbing force by bringing modifications in the internal model. These modifications affect the subsequent motor commands generated by the nervous system. Adaptive compensation along with the appropriate modifications of internal model helps in reducing human movement errors. In the current study, we studied how motor imagery influences trial-to-trial learning in a robot-based adaptation task. Two groups of subjects performed reaching movements with or without motor imagery in a velocity-dependent force field. The results show that reaching movements performed with motor imagery have relatively a more focused generalization pattern and a higher learning rate in training direction.

  7. Gravitational perturbation of irregular bodies modeled with regular polyhedra

    NASA Astrophysics Data System (ADS)

    Venditti, Flaviane; Prado, Antonio

    In this work the study of the dynamics around bodies with non-spherical shapes is considered. The gravitational field of an irregular body, meaning that the mass distribution is asymmetric, generates orbits around this body to perform different from a keplerian orbit. In this case, there is a perturbation on the gravitational field that must be analyzed. To know the gravitational force of an irregular object, first it is necessary to model this body, which is not an easy thing to do, considering that, usually, they are not symmetric figures. To better model the irregular objects, a combination of several geometric figures can be used, like parallelepipeds. This can be applied to asteroids, which are objects with non-spherical shapes. The disturbing force generated by these bodies can then be obtained as the sum of the force on each figure. Here the equation for the potential of a cube is considered (MacMillan, 1930), which makes it possible to have analytical results. The main idea is to build a body with several cubes, and having the gravitational potential of each cube, it is possible to obtain the total perturbation as the sum of the forces acting on each piece. This methodology can be very helpful on space missions to small bodies, because when a spacecraft is in the vicinity of an irregular body, the gravitational perturbation generated by its shape must be considered to compensate this effect.

  8. Mechanisms explaining Coulomb's electric force & Lorentz's magnetic force from a classical perspective

    NASA Astrophysics Data System (ADS)

    Correnti, Dan S.

    2018-06-01

    The underlying mechanisms of the fundamental electric and magnetic forces are not clear in current models; they are mainly mathematical constructs. This study examines the underlying physics from a classical viewpoint to explain Coulomb's electric force and Lorentz's magnetic force. This is accomplished by building upon already established physics. Although no new physics is introduced, extension of existing models is made by close examination. We all know that an electron carries a bound cylindrical B-field (CBF) as it translates. Here, we show how the electron CBF plays an intrinsic role in the generation of the electric and magnetic forces.

  9. Optical Manipulation with Plasmonic Beam Shaping Antenna Structures

    DOE PAGES

    Jun, Young Chul; Brener, Igal

    2012-01-01

    Near-field optical trapping of objects using plasmonic antenna structures has recently attracted great attention. However, metal nanostructures also provide a compact platform for general wavefront engineering of intermediate and far-field beams. Here, we analyze optical forces generated by plasmonic beam shaping antenna structures and show that they can be used for general optical manipulation such as guiding of a dielectric particle along a linear or curved trajectory. This removes the need for bulky diffractive optical components and facilitates the integration of optical force manipulation into a highly functional, compact system.

  10. Compliant tactile sensor that delivers a force vector

    NASA Technical Reports Server (NTRS)

    Torres-Jara, Eduardo (Inventor)

    2010-01-01

    Tactile Sensor. The sensor includes a compliant convex surface disposed above a sensor array, the sensor array adapted to respond to deformation of the convex surface to generate a signal related to an applied force vector. The applied force vector has three components to establish the direction and magnitude of an applied force. The compliant convex surface defines a dome with a hollow interior and has a linear relation between displacement and load including a magnet disposed substantially at the center of the dome above a sensor array that responds to magnetic field intensity.

  11. Evaluating Parametrization Protocols for Hydration Free Energy Calculations with the AMOEBA Polarizable Force Field.

    PubMed

    Bradshaw, Richard T; Essex, Jonathan W

    2016-08-09

    Hydration free energy (HFE) calculations are often used to assess the performance of biomolecular force fields and the quality of assigned parameters. The AMOEBA polarizable force field moves beyond traditional pairwise additive models of electrostatics and may be expected to improve upon predictions of thermodynamic quantities such as HFEs over and above fixed-point-charge models. The recent SAMPL4 challenge evaluated the AMOEBA polarizable force field in this regard but showed substantially worse results than those using the fixed-point-charge GAFF model. Starting with a set of automatically generated AMOEBA parameters for the SAMPL4 data set, we evaluate the cumulative effects of a series of incremental improvements in parametrization protocol, including both solute and solvent model changes. Ultimately, the optimized AMOEBA parameters give a set of results that are not statistically significantly different from those of GAFF in terms of signed and unsigned error metrics. This allows us to propose a number of guidelines for new molecule parameter derivation with AMOEBA, which we expect to have benefits for a range of biomolecular simulation applications such as protein-ligand binding studies.

  12. A unified large/small-scale dynamo in helical turbulence

    NASA Astrophysics Data System (ADS)

    Bhat, Pallavi; Subramanian, Kandaswamy; Brandenburg, Axel

    2016-09-01

    We use high resolution direct numerical simulations (DNS) to show that helical turbulence can generate significant large-scale fields even in the presence of strong small-scale dynamo action. During the kinematic stage, the unified large/small-scale dynamo grows fields with a shape-invariant eigenfunction, with most power peaked at small scales or large k, as in Subramanian & Brandenburg. Nevertheless, the large-scale field can be clearly detected as an excess power at small k in the negatively polarized component of the energy spectrum for a forcing with positively polarized waves. Its strength overline{B}, relative to the total rms field Brms, decreases with increasing magnetic Reynolds number, ReM. However, as the Lorentz force becomes important, the field generated by the unified dynamo orders itself by saturating on successively larger scales. The magnetic integral scale for the positively polarized waves, characterizing the small-scale field, increases significantly from the kinematic stage to saturation. This implies that the small-scale field becomes as coherent as possible for a given forcing scale, which averts the ReM-dependent quenching of overline{B}/B_rms. These results are obtained for 10243 DNS with magnetic Prandtl numbers of PrM = 0.1 and 10. For PrM = 0.1, overline{B}/B_rms grows from about 0.04 to about 0.4 at saturation, aided in the final stages by helicity dissipation. For PrM = 10, overline{B}/B_rms grows from much less than 0.01 to values of the order the 0.2. Our results confirm that there is a unified large/small-scale dynamo in helical turbulence.

  13. Free-energy landscape of the villin headpiece in an all-atom force field.

    PubMed

    Herges, Thomas; Wenzel, Wolfgang

    2005-04-01

    We investigate the landscape of the internal free-energy of the 36 amino acid villin headpiece with a modified basin hopping method in the all-atom force field PFF01, which was previously used to predictively fold several helical proteins with atomic resolution. We identify near native conformations of the protein as the global optimum of the force field. More than half of the twenty best simulations started from random initial conditions converge to the folding funnel of the native conformation, but several competing low-energy metastable conformations were observed. From 76,000 independently generated conformations we derived a decoy tree which illustrates the topological structure of the entire low-energy part of the free-energy landscape and characterizes the ensemble of metastable conformations. These emerge as similar in secondary content, but differ in tertiary arrangement.

  14. Dynamical and fractal properties in periodically forced stretch-twist-fold (STF) flow

    NASA Astrophysics Data System (ADS)

    Aqeel, Muhammad; Ahmad, Salman; Azam, Anam; Ahmed, Faizan

    2017-05-01

    The periodically forced stretch-twist-fold (STF) flow is introduced in this article. The nonlinear behavior of the STF flow with periodic force along the y -axis is investigated analytically and numerically. The STF flow is a prototype of the dynamo theory that proposes a mechanism of magnetic field generation continuously. The stability analysis is done by Routh Huwritz criteria and Cardano method. Chasing chaos through numerical simulation is determined to demonstrate the chaotic behavior of the forced STF flow. With the help of fractal processes based on the forced STF flow, a multi-wing forced STF flow is obtained that gives a n -wing forced STF flow system.

  15. Visualization and analysis of vortex-turbine intersections in wind farms.

    PubMed

    Shafii, Sohail; Obermaier, Herald; Linn, Rodman; Koo, Eunmo; Hlawitschka, Mario; Garth, Christoph; Hamann, Bernd; Joy, Kenneth I

    2013-09-01

    Characterizing the interplay between the vortices and forces acting on a wind turbine's blades in a qualitative and quantitative way holds the potential for significantly improving large wind turbine design. This paper introduces an integrated pipeline for highly effective wind and force field analysis and visualization. We extract vortices induced by a turbine's rotation in a wind field, and characterize vortices in conjunction with numerically simulated forces on the blade surfaces as these vortices strike another turbine's blades downstream. The scientifically relevant issue to be studied is the relationship between the extracted, approximate locations on the blades where vortices strike the blades and the forces that exist in those locations. This integrated approach is used to detect and analyze turbulent flow that causes local impact on the wind turbine blade structure. The results that we present are based on analyzing the wind and force field data sets generated by numerical simulations, and allow domain scientists to relate vortex-blade interactions with power output loss in turbines and turbine life expectancy. Our methods have the potential to improve turbine design to save costs related to turbine operation and maintenance.

  16. Magnetic bucket for rotating unmagnetized plasma.

    PubMed

    Katz, Noam; Collins, Cami; Wallace, John; Clark, Mike; Weisberg, David; Jara-Almonte, Jon; Reese, Ingrid; Wahl, Carl; Forest, Cary

    2012-06-01

    A new experiment is described which generates flow in unmagnetized plasma. Confinement is provided by a cage of permanent magnets, arranged to form an axisymmetric, high-order, multipolar magnetic field. This field configuration-sometimes called a "magnetic bucket"-has a vanishingly small field in the core of the experiment. Toroidal rotation is driven by J × B forces applied in the magnetized edge. The cross-field current that is required for this forcing flows from anodes to thermionic cathodes, which are inserted between the magnet rings. The rotation at the edge reaches 3 km/s and is viscously coupled to the unmagnetized core plasma. We describe the conditions necessary for rotation, as well as a 0-dimensional power balance used to understand plasma confinement in the experiment.

  17. Study of Hydrokinetic Turbine Arrays with Large Eddy Simulation

    NASA Astrophysics Data System (ADS)

    Sale, Danny; Aliseda, Alberto

    2014-11-01

    Marine renewable energy is advancing towards commercialization, including electrical power generation from ocean, river, and tidal currents. The focus of this work is to develop numerical simulations capable of predicting the power generation potential of hydrokinetic turbine arrays-this includes analysis of unsteady and averaged flow fields, turbulence statistics, and unsteady loadings on turbine rotors and support structures due to interaction with rotor wakes and ambient turbulence. The governing equations of large-eddy-simulation (LES) are solved using a finite-volume method, and the presence of turbine blades are approximated by the actuator-line method in which hydrodynamic forces are projected to the flow field as a body force. The actuator-line approach captures helical wake formation including vortex shedding from individual blades, and the effects of drag and vorticity generation from the rough seabed surface are accounted for by wall-models. This LES framework was used to replicate a previous flume experiment consisting of three hydrokinetic turbines tested under various operating conditions and array layouts. Predictions of the power generation, velocity deficit and turbulence statistics in the wakes are compared between the LES and experimental datasets.

  18. Effect of particle-particle interactions on the acoustic radiation force in an ultrasonic standing wave

    NASA Astrophysics Data System (ADS)

    Lipkens, Bart; Ilinskii, Yurii A.; Zabolotskaya, Evgenia A.

    2015-10-01

    Ultrasonic standing waves are widely used for separation applications. In MEMS applications, a half wavelength standing wave field is generated perpendicular to a laminar flow. The acoustic radiation force exerted on the particle drives the particle to the center of the MEMS channel, where concentrated particles are harvested. In macro-scale applications, the ultrasonic standing wave spans multiple wavelengths. Examples of such applications are oil/water emulsion splitting [1], and blood/lipid separation [2]. In macro-scale applications, particles are typically trapped in the standing wave, resulting in clumping or coalescence of particles/droplets. Subsequent gravitational settling results in separation of the secondary phase. An often used expression for the radiation force on a particle is that derived by Gorkov [3]. The assumptions are that the particle size is small relative to the wavelength, and therefore, only monopole and dipole scattering contributions are used to calculate the radiation force. This framework seems satisfactory for MEMS scale applications where each particle is treated separately by the standing wave, and concentrations are typically low. In macro-scale applications, particle concentration is high, and particle clumping or droplet coalescence results in particle sizes not necessarily small relative to the wavelength. Ilinskii et al. developed a framework for calculation of the acoustic radiation force valid for any size particle [4]. However, this model does not take into account particle to particle effects, which can become important as particle concentration increases. It is known that an acoustic radiation force on a particle or a droplet is determined by the local field. An acoustic radiation force expression is developed that includes the effect of particle to particle interaction. The case of two neighboring particles is considered. The approach is based on sound scattering by the particles. The acoustic field at the location of one particle then consists of two components, the incident sound wave and the scattered field generated by the neighboring particle. The radiation force calculation then includes the contributions of these two fields and incorporates the mutual particle influence. In this investigation the droplet/particle influence on each other has been analyzed theoretically by using the method developed by Gorkov and modified by Ilinskii et al.

  19. Effect of particle-particle interactions on the acoustic radiation force in an ultrasonic standing wave

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lipkens, Bart, E-mail: blipkens@wne.edu; Ilinskii, Yurii A., E-mail: ilinskii@gmail.com; Zabolotskaya, Evgenia A., E-mail: zheniazabolotskaya@gmail.com

    Ultrasonic standing waves are widely used for separation applications. In MEMS applications, a half wavelength standing wave field is generated perpendicular to a laminar flow. The acoustic radiation force exerted on the particle drives the particle to the center of the MEMS channel, where concentrated particles are harvested. In macro-scale applications, the ultrasonic standing wave spans multiple wavelengths. Examples of such applications are oil/water emulsion splitting [1], and blood/lipid separation [2]. In macro-scale applications, particles are typically trapped in the standing wave, resulting in clumping or coalescence of particles/droplets. Subsequent gravitational settling results in separation of the secondary phase. Anmore » often used expression for the radiation force on a particle is that derived by Gorkov [3]. The assumptions are that the particle size is small relative to the wavelength, and therefore, only monopole and dipole scattering contributions are used to calculate the radiation force. This framework seems satisfactory for MEMS scale applications where each particle is treated separately by the standing wave, and concentrations are typically low. In macro-scale applications, particle concentration is high, and particle clumping or droplet coalescence results in particle sizes not necessarily small relative to the wavelength. Ilinskii et al. developed a framework for calculation of the acoustic radiation force valid for any size particle [4]. However, this model does not take into account particle to particle effects, which can become important as particle concentration increases. It is known that an acoustic radiation force on a particle or a droplet is determined by the local field. An acoustic radiation force expression is developed that includes the effect of particle to particle interaction. The case of two neighboring particles is considered. The approach is based on sound scattering by the particles. The acoustic field at the location of one particle then consists of two components, the incident sound wave and the scattered field generated by the neighboring particle. The radiation force calculation then includes the contributions of these two fields and incorporates the mutual particle influence. In this investigation the droplet/particle influence on each other has been analyzed theoretically by using the method developed by Gorkov and modified by Ilinskii et al.« less

  20. Origin of the Earth's Electromagnetic Field Based on the Pulsating Mantle Hypothesis (PMH)

    NASA Astrophysics Data System (ADS)

    Gholibeigian, Hassan

    2017-11-01

    In PMH, the Earth's Inner Core's Dislocation (ICD) and Outer Core's Bulge (OCB) phenomena are generated by unbalanced gravitational fields of the Sun and Moon on the Earth. Distance between the Earth's center and inner core's center varies permanently in magnitude and direction inside two hemispheres. Geometrical loci of the inner core's center has the shape of back and force spiral cone in each hemisphere. In other words, the inner core is rotating fast in the outer core inverse of the Earth's rotation a round per day. This mechanism speed up the processes inside the core and generates a Large Scale Forced Convection System (LSFCS) inverse of the Earth's rotation in the core. The LSFCS is the origin of the Earth's electromagnetic field. The LSFCS generates huge mass transfer and momentum of inertia inside the Earth too. The inner core's axis which is the Earth's electromagnetic axis doesn't cross the Earth's geophysical axis and rotates around it per day. The mechanism of this LSFCS has diurnal, monthly and yearly cycles. These cycles are sources of the Earth's electromagnetic field variability. Direction of the variable Earth's magnetic field lines from the South Pole (hemisphere) to the sky and 146 seconds/years apparent solar day length variations can be two observable factors for this mechanism. This dynamic system may occurred inside the other planets like the Sun and the Jupiter.

  1. Propulsion Utilizing Laser-Driven Ponderomotive Fields for Deep-Space Missions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Williams, George J.; Gilland, James H.

    The generation of large amplitude electric fields in plasmas by high-power lasers has been studied for several years in the context of high-energy particle acceleration. Fields on the order of GeV/m are generated in the plasma wake of the laser by non-linear ponderomotive forces. The laser fields generate longitudinal and translational electron plasma waves with phase velocities close to the speed of light. These fields and velocities offer the potential to revolutionize spacecraft propulsion, leading to extended deep space robotic probes. Based on these initial calculations, plasma acceleration by means of laser-induced ponderomotive forces appears to offer significant potential formore » spacecraft propulsion. Relatively high-efficiencies appear possible with proper beam conditioning, resulting in an order of magnitude more thrust than alternative concepts for high I{sub SP} (>10{sup 5} s) and elimination of the primary life-limiting erosion phenomena associated with conventional electric propulsion systems. Ponderomotive propulsion readily lends itself to beamed power which might overcome some of the constraints of power-limited propulsion concepts. A preliminary assessment of the impact of these propulsion systems for several promising configurations on mission architectures has been conducted. Emphasizing interstellar and interstellar-precursor applications, performance and technical requirements are identified for a number of missions. The use of in-situ plasma and gas for propellant is evaluated as well.« less

  2. Torsional Oscillations with Lorentz Force

    ERIC Educational Resources Information Center

    Gluck, Paul

    2007-01-01

    We have built a device that uses the Lorentz force on a current-carrying wire situated in a magnetic field, F = I L x B, in order to demonstrate a slowly varying alternating current by means of an optical lever. The apparatus consists of a horseshoe magnet, a length of thin enamel-coated wire (ours was 0.3 mm thick), a signal generator, a…

  3. Transitions in the vortex wake behind the plunging profile

    NASA Astrophysics Data System (ADS)

    Kozłowski, Tomasz; Kudela, Henryk

    2014-12-01

    In this study we investigate numerically the vortex wake formation behind the profile performing simple harmonic motion known in the literature as plunging. This research was inspired by the flapping motion which is appropriate for birds, insects and fishes. We assume the two dimensional model of flow. Depending on the parameters such as plunging amplitude, frequency and the Reynolds number, we demonstrate many different types of vortex street behind the profile. It is well known that the type of vortex wake determines the hydrodynamic forces acting on the profile. Dependences of the plunging amplitude, the Strouhal number and various topology vortices are established by constructing the phase transition diagram. The areas in the diagram related to the drag, thrust, and lift force generation are captured. We notice also the areas where the vorticity field is disordered. The disordered vorticity field does not allow maintenance of the periodic forces on the profile. An increase in the Reynolds number leads to the transition of the vortex wake behind the profile. The transition is caused by the phenomenon of boundary layer eruption. Further increase of the Reynolds number causes the vortex street related to the generation of the lift force to vanish.

  4. Transferable Coarse-Grained Models for Ionic Liquids.

    PubMed

    Wang, Yanting; Feng, Shulu; Voth, Gregory A

    2009-04-14

    The effective force coarse-graining (EF-CG) method was applied to the imidazolium-based nitrate ionic liquids with various alkyl side-chain lengths. The nonbonded EF-CG forces for the ionic liquid with a short side chain were extended to generate the nonbonded forces for the ionic liquids with longer side chains. The EF-CG force fields for the ionic liquids exhibit very good transferability between different systems at various temperatures and are suitable for investigating the mesoscopic structural properties of this class of ionic liquids. The good additivity and ease of manipulation of the EF-CG force fields can allow for an inverse design methodology of ionic liquids at the coarse-grained level. With the EF-CG force field, the molecular dynamics (MD) simulation at a very large scale has been performed to check the significance of finite size effects on the structural properties. From these MD simulation results, it can be concluded that the finite size effect on the phenomenon of ionic liquid spatial heterogeneity (Wang, Y.; Voth, G. A. J. Am. Chem. Soc. 2005, 127, 12192) is small and that this phenomenon is indeed a nanostructural behavior which leads to the experimentally observed mesoscopic heterogeneous structure of ionic liquids.

  5. A self-sensing magnetorheological damper with power generation

    NASA Astrophysics Data System (ADS)

    Chen, Chao; Liao, Wei-Hsin

    2012-02-01

    Magnetorheological (MR) dampers are promising for semi-active vibration control of various dynamic systems. In the current MR damper systems, a separate power supply and dynamic sensor are required. To enable the MR damper to be self-powered and self-sensing in the future, in this paper we propose and investigate a self-sensing MR damper with power generation, which integrates energy harvesting, dynamic sensing and MR damping technologies into one device. This MR damper has self-contained power generation and velocity sensing capabilities, and is applicable to various dynamic systems. It combines the advantages of energy harvesting—reusing wasted energy, MR damping—controllable damping force, and sensing—providing dynamic information for controlling system dynamics. This multifunctional integration would bring great benefits such as energy saving, size and weight reduction, lower cost, high reliability, and less maintenance for the MR damper systems. In this paper, a prototype of the self-sensing MR damper with power generation was designed, fabricated, and tested. Theoretical analyses and experimental studies on power generation were performed. A velocity-sensing method was proposed and experimentally validated. The magnetic-field interference among three functions was prevented by a combined magnetic-field isolation method. Modeling, analysis, and experimental results on damping forces are also presented.

  6. Machine-Thermal Coupling Stresses Analysis of the Fin-Type Structural Thermoelectric Generator

    NASA Astrophysics Data System (ADS)

    Zhang, Zheng; Yue, Hao; Chen, Dongbo; Qin, Delei; Chen, Zijian

    2017-05-01

    The design structure and heat-transfer mechanism of a thermoelectric generator (TEG) determine its body temperature state. Thermal stress and thermal deformation generated by the temperature variation directly affect the stress state of thermoelectric modules (TEMs). Therefore, the rated temperature and pressing force of TEMs are important parameters in TEG design. Here, the relationships between structural of a fin-type TEG (FTEG) and these parameters are studied by modeling and "machine-thermal" coupling simulation. An indirect calculation method is adopted in the coupling simulation. First, numerical heat transfer calculations of a three-dimensional FTEG model are conducted according to an orthogonal simulation table. The influences of structural parameters for heat transfer in the channel and outer fin temperature distribution are analyzed. The optimal structural parameters are obtained and used to simulate temperature field of the outer fins. Second, taking the thermal calculation results as the initial condition, the thermal-solid coupling calculation is adopted. The thermal stresses of outer fin, mechanical force of spring-angle pressing mechanism, and clamping force on a TEM are analyzed. The simulation results show that the heat transfer area of the inner fin and the physical parameters of the metal materials are the keys to determining the FTEG temperature field. The pressing mechanism's mechanical force can be reduced by reducing the outer fin angle. In addition, a corrugated cooling water pipe, which has cooling and spring functionality, is conducive to establishing an adaptable clamping force to avoid the TEMs being crushed by the thermal stresses in the body.

  7. Silk-polypyrrole biocompatible actuator performance under biologically relevant conditions

    NASA Astrophysics Data System (ADS)

    Hagler, Jo'elen; Peterson, Ben; Murphy, Amanda; Leger, Janelle

    Biocompatible actuators that are capable of controlled movement and can function under biologically relevant conditions are of significant interest in biomedical fields. Previously, we have demonstrated that a composite material of silk biopolymer and the conducting polymer polypyrrole (PPy) can be formed into a bilayer device that can bend under applied voltage. Further, these silk-PPy composites can generate forces comparable to human muscle (>0.1 MPa) making them ideal candidates for interfacing with biological tissues. Here silk-PPy composite films are tested for performance under biologically relevant conditions including exposure to a complex protein serum and biologically relevant temperatures. Free-end bending actuation performance, current response, force generation and, mass degradation were investigated . Preliminary results show that when exposed to proteins and biologically relevant temperatures, these silk-PPy composites show minimal degradation and are able to generate forces and conduct currents comparable to devices tested under standard conditions. NSF.

  8. Recent Advances in Our Understanding of Nuclear Forces

    NASA Astrophysics Data System (ADS)

    Machleidt, Ruprecht

    2007-05-01

    The attempts to find the right (underlying) theory for the nuclear force have a long and stimulating history. Already in 1953, Hans Bethe stated that ``more man-hours have been given to this problem than to any other scientific question in the history of mankind.'' In search for the nature of the nuclear force, the idea of sub-nuclear particles was created which, eventually, generated the field of particle physics. I will review this productive history of hope, error, and desperation. Finally, I will discuss recent ideas which apply the concept of an effective field theory to low-energy QCD. There are indications that this concept may provide the right framework to properly understand the nuclear force. To cite this abstract, use the following reference: http://meetings.aps.org/link/BAPS.2007.NWS07.B2.1

  9. Matter in the form of toroidal electromagnetic vortices

    NASA Astrophysics Data System (ADS)

    Hagen, Wilhelm F.

    2015-09-01

    The creation of charged elementary particles from neutral photons is explained as a conversion process of electromagnetic (EM) energy from linear to circular motion at the speed of light into two localized, toroidal shaped vortices of trapped EM energy that resist change of motion, perceptible as particles with inertia and hence mass. The photon can be represented as a superposition of left and right circular polarized transverse electric fields of opposite polarity originating from a common zero potential axis, the optical axis of the photon. If these components are separated by interaction with a strong field (nucleon) they would curl up into two electromagnetic vortices (EMV) due to longitudinal magnetic field components forming toroids. These vortices are perceptible as opposite charged elementary particles e+/- . These spinning toroids generate extended oscillating fields that interact with stationary field oscillations. The velocity-dependent frequency differences cause beat signals equivalent to matter waves, leading to interference. The extended fields entangled with every particle explain wave particle duality issues. Spin and magnetic moment are the natural outcome of these gyrating particles. As the energy and hence mass of the electron increases with acceleration so does its size shrink proportional to its reduced wavelength. The artificial weak and strong nuclear forces can be easily explained as different manifestations of the intermediate EM forces. The unstable neutron consists of a proton surrounded by a contracted and captured electron. The associated radial EM forces represent the weak nuclear force. The deuteron consists of two axially separated protons held together by a centrally captured electron. The axial EM forces represent the strong nuclear force, providing stability for "neutrons" only within nucleons. The same principles were applied to determine the geometries of force-balanced nuclei. The alpha-particle emerges as a very compact symmetric cuboid that provides a unique building block to assemble the isotopic chart. Exotic neutron- 4 appears viable which may explain dark matter. The recognition that all heavy particles, including the protons, are related to electrons via muons and pions explains the identity of all charges to within 10-36. Greater deviations would overpower gravitation. Gravitation can be traced to EM vacuum fluctuations generated by standing EM waves between interacting particles. On that basis, gravity can be correlated via microscopic quantities to the age of the universe of 13.5 billion years. All forces and particles and potentially dark matter and dark energy are different manifestations of EM energy.

  10. Automated Training of ReaxFF Reactive Force Fields for Energetics of Enzymatic Reactions.

    PubMed

    Trnka, Tomáš; Tvaroška, Igor; Koča, Jaroslav

    2018-01-09

    Computational studies of the reaction mechanisms of various enzymes are nowadays based almost exclusively on hybrid QM/MM models. Unfortunately, the success of this approach strongly depends on the selection of the QM region, and computational cost is a crucial limiting factor. An interesting alternative is offered by empirical reactive molecular force fields, especially the ReaxFF potential developed by van Duin and co-workers. However, even though an initial parametrization of ReaxFF for biomolecules already exists, it does not provide the desired level of accuracy. We have conducted a thorough refitting of the ReaxFF force field to improve the description of reaction energetics. To minimize the human effort required, we propose a fully automated approach to generate an extensive training set comprised of thousands of different geometries and molecular fragments starting from a few model molecules. Electrostatic parameters were optimized with QM electrostatic potentials as the main target quantity, avoiding excessive dependence on the choice of reference atomic charges and improving robustness and transferability. The remaining force field parameters were optimized using the VD-CMA-ES variant of the CMA-ES optimization algorithm. This method is able to optimize hundreds of parameters simultaneously with unprecedented speed and reliability. The resulting force field was validated on a real enzymatic system, ppGalNAcT2 glycosyltransferase. The new force field offers excellent qualitative agreement with the reference QM/MM reaction energy profile, matches the relative energies of intermediate and product minima almost exactly, and reduces the overestimation of transition state energies by 27-48% compared with the previous parametrization.

  11. Monitoring of the Conformational Space of Dipeptides by Generative Topographic Mapping.

    PubMed

    Horvath, Dragos; Marcou, Gilles; Varnek, Alexandre

    2018-01-01

    This work describes a procedure to build generative topographic maps (GTM) as 2D representation of the conformational space (CS) of dipeptides. GTMs with excellent propensities to support highly predictive landscapes of various conformational properties were reported for three dipeptides (AA, KE and KR). CS monitoring via GTMproceeds through the projection of conformer ensembles on the map, producing cumulated responsibility (CR) vectors characteristic of the CS areas covered by the ensemble. Overlap of the CS areas visited by two distinct simulations can be expressed by the Tanimoto coefficient Tc of the associated CRs. This idea was used to monitor the reproducibility of the stochastic evolutionary conformer generation process implemented in S4MPLE. It could be shown that conformers produced by <500 S4MPLE runs reproducibly cover the relevant CS zone at given setup of the driving force field. The propensity of a simulation to visit the native CS zone can thus be quantitatively estimated, as the Tc score with respect to the "native" CR, as defined by the ensemble of dipeptide geometries extracted from PDB proteins. It could be shown that low-energy CS regions were indeed found to fall within the native zone. The Tc overlap score behaved as a smooth function of force field parameters. This opens the perspective of a novel force field parameter tuning procedure, bound to simultaneously optimize the behavior of the in Silico simulations for every possible dipeptide. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  12. Dielectrophoretic behaviours of microdroplet sandwiched between LN substrates

    PubMed Central

    Chen, Lipin; Li, Shaobei; Fan, Bolin; Yan, Wenbo; Wang, Donghui; Shi, Lihong; Chen, Hongjian; Ban, Dechao; Sun, Shihao

    2016-01-01

    We demonstrate a sandwich configuration for microfluidic manipulation in LiNbO3 platform based on photovoltaic effect, and the behaviours of dielectric microdroplet under this sandwich configuration are investigated. It is found that the microdroplet can generate in the form of liquid bridge inside the LiNbO3-based sandwich structure under the governing dielectrophoretic force, and the dynamic process of microdroplet generation highly depends on the substrate combinations. Dynamic features found for different combinations are explained by the different electrostatic field distribution basing on the finite-element simulation results. Moreover, the electrostatic field required by the microdroplet generation is estimated through meniscus evolution and it is found in good agreement with the simulated electrostatic field inside the sandwich gap. Several kinds of microdroplet manipulations are attempted in this work. We suggest that the local dielectrophoretic force acting on the microdroplet depends on the distribution of the accumulated irradiation dosage. Without using any additional pumping or jetting actuator, the microdroplet can be step-moved, deformed or patterned by the inconsecutive dot-irradiation scheme, as well as elastically stretched out and back or smoothly guided in a designed pass by the consecutive line-irradiation scheme. PMID:27383027

  13. Rotatable Small Permanent Magnet Array for Ultra-Low Field Nuclear Magnetic Resonance Instrumentation: A Concept Study.

    PubMed

    Vogel, Michael W; Giorni, Andrea; Vegh, Viktor; Pellicer-Guridi, Ruben; Reutens, David C

    2016-01-01

    We studied the feasibility of generating the variable magnetic fields required for ultra-low field nuclear magnetic resonance relaxometry with dynamically adjustable permanent magnets. Our motivation was to substitute traditional electromagnets by distributed permanent magnets, increasing system portability. The finite element method (COMSOL®) was employed for the numerical study of a small permanent magnet array to calculate achievable magnetic field strength, homogeneity, switching time and magnetic forces. A manually operated prototype was simulated and constructed to validate the numerical approach and to verify the generated magnetic field. A concentric small permanent magnet array can be used to generate strong sample pre-polarisation and variable measurement fields for ultra-low field relaxometry via simple prescribed magnet rotations. Using the array, it is possible to achieve a pre-polarisation field strength above 100 mT and variable measurement fields ranging from 20-50 μT with 200 ppm absolute field homogeneity within a field-of-view of 5 x 5 x 5 cubic centimetres. A dynamic small permanent magnet array can generate multiple highly homogeneous magnetic fields required in ultra-low field nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI) instruments. This design can significantly reduce the volume and energy requirements of traditional systems based on electromagnets, improving portability considerably.

  14. Investigation of shock-acoustic-wave interaction in transonic flow

    NASA Astrophysics Data System (ADS)

    Feldhusen-Hoffmann, Antje; Statnikov, Vladimir; Klaas, Michael; Schröder, Wolfgang

    2018-01-01

    The buffet flow field around supercritical airfoils is dominated by self-sustained shock wave oscillations on the suction side of the wing. Theories assume that this unsteadiness is driven by an acoustic feedback loop of disturbances in the flow field downstream of the shock wave whose upstream propagating part is generated by acoustic waves. Therefore, in this study, first variations in the sound pressure level of the airfoil's trailing-edge noise during a buffet cycle, which force the shock wave to move upstream and downstream, are detected, and then, the sensitivity of the shock wave oscillation during buffet to external acoustic forcing is analyzed. Time-resolved standard and tomographic particle-image velocimetry (PIV) measurements are applied to investigate the transonic buffet flow field over a supercritical DRA 2303 airfoil. The freestream Mach number is M_{∞} = 0.73, the angle of attack is α = {3.5}°, and the chord-based Reynolds number is Re_c = 1.9× 10^6. The perturbed Lamb vector field, which describes the major acoustic source term of trailing-edge noise, is determined from the tomographic PIV data. Subsequently, the buffet flow field is disturbed by an artificially generated acoustic field, the acoustic intensity of which is comparable to the Lamb vector that is determined from the PIV data. The results confirm the hypothesis that buffet is driven by an acoustic feedback loop and show the shock wave oscillation to directly respond to external acoustic forcing. That is, the amplitude modulation frequency of the artificial acoustic perturbation determines the shock oscillation.

  15. Symmetry in circularly polarized molecular high-order harmonic generation with intense bicircular laser pulses

    NASA Astrophysics Data System (ADS)

    Yuan, Kai-Jun; Bandrauk, André D.

    2018-02-01

    We present symmetry effects of laser fields and molecular geometries in circularly polarized high-order harmonic generation by bichromatic counter-rotating circularly polarized laser pulses. Simulations are performed on oriented molecules by numerically solving time-dependent Schrödinger equations. We discuss how electron recollision trajectories by the orthogonal laser field polarizations influence the harmonic polarization by using a time-frequency analysis of harmonics. It is found that orientation-dependent asymmetric ionization in linear molecules due to Coulomb potentials gives rise to a dependence of the polarization on the harmonic frequency. Effects of Coriolis forces are also presented on harmonic generation. Electron recollision trajectories illustrate the effects of the relative symmetry of the field and the molecule, thus paving a method for circularly polarized attosecond pulse generation and molecular orbital imaging in more complex systems.

  16. Transient multi-physics analysis of a magnetorheological shock absorber with the inverse Jiles-Atherton hysteresis model

    NASA Astrophysics Data System (ADS)

    Zheng, Jiajia; Li, Yancheng; Li, Zhaochun; Wang, Jiong

    2015-10-01

    This paper presents multi-physics modeling of an MR absorber considering the magnetic hysteresis to capture the nonlinear relationship between the applied current and the generated force under impact loading. The magnetic field, temperature field, and fluid dynamics are represented by the Maxwell equations, conjugate heat transfer equations, and Navier-Stokes equations. These fields are coupled through the apparent viscosity and the magnetic force, both of which in turn depend on the magnetic flux density and the temperature. Based on a parametric study, an inverse Jiles-Atherton hysteresis model is used and implemented for the magnetic field simulation. The temperature rise of the MR fluid in the annular gap caused by core loss (i.e. eddy current loss and hysteresis loss) and fluid motion is computed to investigate the current-force behavior. A group of impulsive tests was performed for the manufactured MR absorber with step exciting currents. The numerical and experimental results showed good agreement, which validates the effectiveness of the proposed multi-physics FEA model.

  17. Exploring the parameter space of the coarse-grained UNRES force field by random search: selecting a transferable medium-resolution force field.

    PubMed

    He, Yi; Xiao, Yi; Liwo, Adam; Scheraga, Harold A

    2009-10-01

    We explored the energy-parameter space of our coarse-grained UNRES force field for large-scale ab initio simulations of protein folding, to obtain good initial approximations for hierarchical optimization of the force field with new virtual-bond-angle bending and side-chain-rotamer potentials which we recently introduced to replace the statistical potentials. 100 sets of energy-term weights were generated randomly, and good sets were selected by carrying out replica-exchange molecular dynamics simulations of two peptides with a minimal alpha-helical and a minimal beta-hairpin fold, respectively: the tryptophan cage (PDB code: 1L2Y) and tryptophan zipper (PDB code: 1LE1). Eight sets of parameters produced native-like structures of these two peptides. These eight sets were tested on two larger proteins: the engrailed homeodomain (PDB code: 1ENH) and FBP WW domain (PDB code: 1E0L); two sets were found to produce native-like conformations of these proteins. These two sets were tested further on a larger set of nine proteins with alpha or alpha + beta structure and found to locate native-like structures of most of them. These results demonstrate that, in addition to finding reasonable initial starting points for optimization, an extensive search of parameter space is a powerful method to produce a transferable force field. Copyright 2009 Wiley Periodicals, Inc.

  18. Non-invasive measurement of instantaneous forces during aquatic locomotion: a case study of the bluegill sunfish pectoral fin.

    PubMed

    Peng, Jifeng; Dabiri, John O; Madden, Peter G; Lauder, George V

    2007-02-01

    Swimming and flying animals generate unsteady locomotive forces by delivering net momentum into the fluid wake. Hence, swimming and flying forces can be quantified by measuring the momentum of animal wakes. A recently developed model provides an approach to empirically deduce swimming and flying forces based on the measurement of velocity and vortex added-mass in the animal wake. The model is contingent on the identification of the vortex boundary in the wake. This paper demonstrates the application of that method to a case study quantifying the instantaneous locomotive forces generated by the pectoral fins of the bluegill sunfish (Lepomis macrochirus Rafinesque), measured using digital particle image velocimetry (DPIV). The finite-time Lyapunov exponent (FTLE) field calculated from the DPIV data was used to determine the wake vortex boundary, according to recently developed fluid dynamics theory. Momentum of the vortex wake and its added-mass were determined and the corresponding instantaneous locomotive forces were quantified at discrete time points during the fin stroke. The instantaneous forces estimated in this study agree in magnitude with the time-averaged forces quantified for the pectoral fin of the same species swimming in similar conditions and are consistent with the observed global motion of the animals. A key result of this study is its suggestion that the dynamical effect of the vortex wake on locomotion is to replace the real animal fin with an ;effective appendage', whose geometry is dictated by the FTLE field and whose interaction with the surrounding fluid is wholly dictated by inviscid concepts from potential flow theory. Benefits and limitations of this new framework for non-invasive instantaneous force measurement are discussed, and its application to comparative biomechanics and engineering studies is suggested.

  19. Charge dependence of the plasma travel length in atmospheric-pressure plasma

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yambe, Kiyoyuki; Konda, Kohmei; Masuda, Seiya

    Plasma plume is generated using a quartz tube, helium gas, and foil electrode by applying AC high voltage under the atmosphere. The plasma plume is released into the atmosphere from inside of the quartz tube and is seen as the continuous movement of the plasma bullet. The travel length of plasma bullet is defined from plasma energy and force due to electric field. The drift velocity of plasma bullet has the upper limit under atmospheric-pressure because the drift velocity is determined from the balance between electric field and resistive force due to collisions between plasma and air. The plasma plumemore » charge depends on the drift velocity. Consequently, in the laminar flow of helium gas flow state, the travel length of the plasma plume logarithmically depends on the plasma plume charge which changes with both the electric field and the resistive force.« less

  20. Development and Comparison of Mechanical Structures for FNAL 15 T Nb$$_3$$Sn Dipole Demonstrator

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Novitski, I.; Zlobin, A. V.

    2016-11-08

    Main design challenges for 15 T accelerator magnets are large Lorentz forces at this field level. The large Lorentz forces generate high stresses in the coil and mechanical structure and, thus, need stress control to maintain them at the acceptable level for brittle Nb3Sn coils and other elements of magnet mechanical structure. To provide these conditions and achieve the design field in the FNAL 15 T dipole demonstrator, several mechanical structures have been developed and analysed. The possibilities and limitations of these designs are discussed in this paper

  1. Stochastic generation of MAC waves and implications for convection in Earth's core

    NASA Astrophysics Data System (ADS)

    Buffett, Bruce; Knezek, Nicholas

    2018-03-01

    Convection in Earth's core can sustain magnetic-Archemedes-Coriolis (MAC) waves through a variety of mechanisms. Buoyancy and Lorentz forces are viable sources for wave motion, together with the effects of magnetic induction. We develop a quantitative description for zonal MAC waves and assess the source mechanisms using a numerical dynamo model. The largest sources at conditions accessible to the dynamo model are due to buoyancy forces and magnetic induction. However, when these sources are extrapolated to conditions expected in Earth's core, the Lorentz force emerges as the dominant generation mechanism. This source is expected to produce wave velocities of roughly 2 km yr-1 when the internal magnetic field is characterized by a dimensionless Elsasser number of roughly Λ ≈ 10 and the root-mean-square convective velocity defines a magnetic Reynolds number of Rm ≈ 103. Our preferred model has a radially varying stratification and a constant (radial) background magnetic field. It predicts a broad power spectrum for the wave velocity with most power distributed across periods from 30 to 100 yr.

  2. Correcting Biases in a lower resolution global circulation model with data assimilation

    NASA Astrophysics Data System (ADS)

    Canter, Martin; Barth, Alexander

    2016-04-01

    With this work, we aim at developping a new method of bias correction using data assimilation. This method is based on the stochastic forcing of a model to correct bias. First, through a preliminary run, we estimate the bias of the model and its possible sources. Then, we establish a forcing term which is directly added inside the model's equations. We create an ensemble of runs and consider the forcing term as a control variable during the assimilation of observations. We then use this analysed forcing term to correct the bias of the model. Since the forcing is added inside the model, it acts as a source term, unlike external forcings such as wind. This procedure has been developed and successfully tested with a twin experiment on a Lorenz 95 model. It is currently being applied and tested on the sea ice ocean NEMO LIM model, which is used in the PredAntar project. NEMO LIM is a global and low resolution (2 degrees) coupled model (hydrodynamic model and sea ice model) with long time steps allowing simulations over several decades. Due to its low resolution, the model is subject to bias in area where strong currents are present. We aim at correcting this bias by using perturbed current fields from higher resolution models and randomly generated perturbations. The random perturbations need to be constrained in order to respect the physical properties of the ocean, and not create unwanted phenomena. To construct those random perturbations, we first create a random field with the Diva tool (Data-Interpolating Variational Analysis). Using a cost function, this tool penalizes abrupt variations in the field, while using a custom correlation length. It also decouples disconnected areas based on topography. Then, we filter the field to smoothen it and remove small scale variations. We use this field as a random stream function, and take its derivatives to get zonal and meridional velocity fields. We also constrain the stream function along the coasts in order not to have currents perpendicular to the coast. The randomly generated stochastic forcing are then directly injected into the NEMO LIM model's equations in order to force the model at each timestep, and not only during the assimilation step. Results from a twin experiment will be presented. This method is being applied to a real case, with observations on the sea surface height available from the mean dynamic topography of CNES (Centre national d'études spatiales). The model, the bias correction, and more extensive forcings, in particular with a three dimensional structure and a time-varying component, will also be presented.

  3. A study of sound generation in subsonic rotors, volume 2

    NASA Technical Reports Server (NTRS)

    Chalupnik, J. D.; Clark, L. T.

    1975-01-01

    Computer programs were developed for use in the analysis of sound generation by subsonic rotors. Program AIRFOIL computes the spectrum of radiated sound from a single airfoil immersed in a laminar flow field. Program ROTOR extends this to a rotating frame, and provides a model for sound generation in subsonic rotors. The program also computes tone sound generation due to steady state forces on the blades. Program TONE uses a moving source analysis to generate a time series for an array of forces moving in a circular path. The resultant time series are than Fourier transformed to render the results in spectral form. Program SDATA is a standard time series analysis package. It reads in two discrete time series and forms auto and cross covariances and normalizes these to form correlations. The program then transforms the covariances to yield auto and cross power spectra by means of a Fourier transformation.

  4. Studies in nonlinear optics and functional magnetic resonance imaging

    NASA Astrophysics Data System (ADS)

    Dai, Tehui

    There are two parts in this thesis. The first part will involve a study in the anomalous dispersion phase matched second-harmonic generation, and the second part will be a study in functional magnetic resonance imaging (fMRI) and a biophysical model of the human muscle. In part I, we report on a series of tricyanovinylaniline chromophores for use as dopants in poled poly(methyl methacrylate) waveguides for anomalous-dispersion phase- matched second-harmonic generation. Second-harmonic generation measurements as a function of mode index confirmed anomalous dispersion phase-matching efficiencies as large as 245%/Wcm2 over a propagation length of ~35 μm. The waveguide coupling technique limited the interaction length. The photostability of the chromophores was measured directly and found to agree qualitatively with second-harmonic measurements over time and was found to be improved over previously reported materials. In part II, we designed a system that could record joint force and surface electromyography (EMG) simultaneously with fMRI data. I-Egh quality force and EMG data were obtained at the same time that excellent fMRI brain images were achieved. Using this system we determined the relationship between the fMRI-measured brain activation and the handgrip force, and between the fMRI-measured brain activation and the EMG of finger flexor muscles. We found that in the whole brain and in the majority of motor function-related cortical fields, the degree of muscle activation is directly proportional to the amplitude of the brain signal determined by the fMRI measurement. The similarity in the relationship between muscle output and fMRI signal in a number of brain areas suggests that multiple cortical fields are involved in controlling muscle force. The factors that may contribute to the fMRI signals are discussed. A biophysical twitch force model was developed to predict force response under electrical stimulation. Comparison between experimental and modeled force profiles, peak forces, and force duration shows excellent agreement between the model and the experimental data. It is concluded that the present model allows us to reproduce the main features of muscle activation under stimulation.

  5. A mixed pseudospectral/finite difference method for a thermally driven fluid in a nonuniform gravitational field

    NASA Technical Reports Server (NTRS)

    Macaraeg, M. G.

    1985-01-01

    A numerical study of the steady, axisymmetric flow in a heated, rotating spherical shell is conducted to model the Atmospheric General Circulation Experiment (AGCE) proposed to run aboard a later Shuttle mission. The AGCE will consist of concentric rotating spheres confining a dielectric fluid. By imposing a dielectric field across the fluid a radial body force will be created. The numerical solution technique is based on the incompressible Navier-Stokes equations. In the method a pseudospectral technique is used in the latitudinal direction, and a second-order accurate finite difference scheme discretizes time and radial derivatives. This paper discusses the development and performance of this numerical scheme for the AGCE which has been modeled in the past only by pure FD formulations. In addition, previous models have not investigated the effect of using a dielectric force to simulate terrestrial gravity. The effect of this dielectric force on the flow field is investigated as well as a parameter study of varying rotation rates and boundary temperatures. Among the effects noted are the production of larger velocities and enhanced reversals of radial temperature gradients for a body force generated by the electric field.

  6. Parametric study of an acoustic levitation system. [for thermophysical properties determination of nonmetal materials

    NASA Technical Reports Server (NTRS)

    Oran, W. A.; Berge, L. H.; Parker, H. W.

    1980-01-01

    The performance of an acoustic levitation system designed for the containerless processing of materials and consisting of a St. Clair generator and a reflector arranged in a six-axis configuration, is examined in order to define critical parameters of high-temperature systems and limitations of earth-based devices. The fields and forces along the axis of the system are measured and the forces are plotted versus body volume. It is found that for a range of shapes and sizes the levitation force is roughly proportional to body volume until the characteristic 'diameter' reaches a value of about lambda/2. A significant (i.e., factor of four) enhancement in the levitation force is obtained by curving the faces of the driver and reflector. In addition, the behavior of liquid materials in the acoustic fields is studied, and the radius at which the deformation of a levitated drop occurs is calculated.

  7. Visualization and Analysis of Vortex-Turbine Intersections in Wind Farms.

    PubMed

    Shafii, Sohail; Obermaier, Harald; Linn, Rodman; Koo, Eunmo; Hlawitschka, Mario; Garth, Christoph; Hamann, Bernd; Joy, Kenneth

    2013-02-13

    Characterizing the interplay between the vortices and forces acting on a wind turbine's blades in a qualitative and quantitative way holds the potential for significantly improving large wind turbine design. The paper introduces an integrated pipeline for highly effective wind and force field analysis and visualization. We extract vortices induced by a turbine's rotation in a wind field, and characterize vortices in conjunction with numerically simulated forces on the blade surfaces as these vortices strike another turbine's blades downstream. The scientifically relevant issue to be studied is the relationship between the extracted, approximate locations on the blades where vortices strike the blades and the forces that exist in those locations. This integrated approach is used to detect and analyze turbulent flow that causes local impact on the wind turbine blade structure. The results that we present are based on analyzing the wind and force field data sets generated by numerical simulations, and allow domain scientists to relate vortex-blade interactions with power output loss in turbines and turbine life-expectancy. Our methods have the potential to improve turbine design in order to save costs related to turbine operation and maintenance.

  8. Nanophotonic force microscopy: characterizing particle-surface interactions using near-field photonics.

    PubMed

    Schein, Perry; Kang, Pilgyu; O'Dell, Dakota; Erickson, David

    2015-02-11

    Direct measurements of particle-surface interactions are important for characterizing the stability and behavior of colloidal and nanoparticle suspensions. Current techniques are limited in their ability to measure pico-Newton scale interaction forces on submicrometer particles due to signal detection limits and thermal noise. Here we present a new technique for making measurements in this regime, which we refer to as nanophotonic force microscopy. Using a photonic crystal resonator, we generate a strongly localized region of exponentially decaying, near-field light that allows us to confine small particles close to a surface. From the statistical distribution of the light intensity scattered by the particle we are able to map out the potential well of the trap and directly quantify the repulsive force between the nanoparticle and the surface. As shown in this Letter, our technique is not limited by thermal noise, and therefore, we are able to resolve interaction forces smaller than 1 pN on dielectric particles as small as 100 nm in diameter.

  9. Acoustic manipulation of active spherical carriers: Generation of negative radiation force

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Rajabi, Majid, E-mail: majid_rajabi@iust.ac.ir; Mojahed, Alireza

    2016-09-15

    This paper examines theoretically a novel mechanism of generating negative (pulling) radiation force for acoustic manipulation of spherical carriers equipped with piezoelectric actuators in its inner surface. In this mechanism, the spherical particle is handled by common plane progressive monochromatic acoustic waves instead of zero-/higher- order Bessel beams or standing waves field. The handling strategy is based on applying a spatially uniform harmonic electrical voltage at the piezoelectric actuator with the same frequency of handling acoustic waves, in order to change the radiation force effect from repulsive (away from source) to attractive (toward source). This study may be considered asmore » a start point for development of contact-free precise handling and entrapment technology of active carriers which are essential in many engineering and medicine applications.« less

  10. Comparison of force fields on the basis of various model approaches--how to design the best model for the [CnMIM][NTf2] family of ionic liquids.

    PubMed

    Köddermann, Thorsten; Reith, Dirk; Ludwig, Ralf

    2013-10-07

    In this contribution, we present two new united-atom force fields (UA-FFs) for 1-alkyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide [C(n)MIM][NTf(2)] (n=1, 2, 4, 6, 8) ionic liquids (ILs). One is parametrized manually, and the other is developed with the gradient-based optimization workflow (GROW). By doing so, we wanted to perform a hard test to determine how researchers could benefit from semiautomated optimization procedures. As with our already published all-atom force field (AA-FF) for [C(n)MIM][NTf(2)] (T. Köddermann, D. Paschek, R. Ludwig, ChemPhysChem- 2007, 8, 2464), the new force fields were derived to fit experimental densities, self-diffusion coefficients, and NMR rotational correlation times for the IL cation and for water molecules dissolved in [C(2)MIM][NTf(2)]. In the manual force field, the alkyl chains of the cation and the CF3 groups of the anion were treated as united atoms. In the GROW force field, only the alkyl chains of the cation were united. All other parts of the structures of the ions remained unchanged to prevent any loss of physical information. Structural, dynamic, and thermodynamic properties such as viscosity, cation rotational correlation times, and heats of vaporization calculated with the new force fields were compared with values simulated with the previous AA-FF and the experimental data. All simulated properties were in excellent agreement with the experimental values. Altogether, the UA-FFs are slightly superior for speed-up reasons. The UA-FF speeds up the simulation by about 100 % and reduces the demanded disk space by about 78 %. More importantly, real time and efforts to generate force fields could be significantly reduced by utilizing GROW. The real time for the GROW parametrization in this work was 2 months. Manual parametrization, in contrast, may take up to 12 months, and this is, therefore, a significant increase in speed, though it is difficult to estimate the duration of manual parametrization. Copyright © 2013 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. Forced three-dimensional magnetic reconnection due to linkage of magnetic flux tubes

    NASA Technical Reports Server (NTRS)

    Otto, A.

    1995-01-01

    During periods of southward interplanetary magnetic field (IMF) orientation the magnetic field geometry at the dayside magnetopause is susceptible to magnetic reconnection. It has been suggested that reconnection may occur in a localized manner at several patches on the magnetopause. A major problem with this picture is the interaction of magnetic flux ropes which are generated by different reconnection processes. An individual flux rope is bent elbowlike where it intersects the magnetopause and the magnetic field changes from magnetospheric to interplanetary magnetic field orientation. Multiple patches of reconnection can lead to the formation of interlinked magnetic flux tubes. Although the corresponding flux is connected to the IMF the northward and southward connected branches are hooked into each other and cannot develop independently. We have studied this problem in the framework of three-dimensional magnetohydrodynamic simulations. The results indicate that a singular current sheet forms at the interface of two interlinked flux tubes if no resistivity is present in the simulation. This current sheet is strongly tilted compared to the original current sheet. In the presence of resistivity the interaction of the two flux tubes forces a fast reconnection process which generates helically twisted closed magnetospheric flux. This linkage induced reconnection generates a boundary layer with layers of open and closed magnetospheric flux and may account for the brightening of auroral arcs poleward of the boundary between open and closed magnetic flux.

  12. Multiscale Analysis of Rapidly Rotating Dynamo Simulations

    NASA Astrophysics Data System (ADS)

    Orvedahl, R.; Calkins, M. A.; Featherstone, N. A.

    2017-12-01

    The magnetic field of the planets and stars are generated by dynamo action in their electrically conducting fluid interiors. Numerical models of this process solve the fundamental equations of magnetohydrodynamics driven by convection in a rotating spherical shell. Rotation plays an important role in modifying the resulting convective flows and the self-generated magnetic field. We present results of simulating rapidly rotating systems that are unstable to dynamo action. We use the pseudo-spectral code Rayleigh to generate a suite of direct numerical simulations. Each simulation uses the Boussinesq approximation and is characterized by an Ekman number (Ek=ν /Ω L2) of 10-5. We vary the degree of convective forcing to obtain a range of convective Rossby numbers. The resulting flows and magnetic structures are analyzed using a Reynolds decomposition. We determine the relative importance of each term in the scale-separated governing equations and estimate the relevant spatial scales responsible for generating the mean magnetic field.

  13. Electric field generated by longitudinal axial microtubule vibration modes with high spatial resolution microtubule model

    NASA Astrophysics Data System (ADS)

    Cifra, M.; Havelka, D.; Deriu, M. A.

    2011-12-01

    Microtubules are electrically polar structures fulfilling prerequisites for generation of oscillatory electric field in the kHz to GHz region. Energy supply for excitation of elasto-electrical vibrations in microtubules may be provided from GTP-hydrolysis; motor protein-microtubule interactions; and energy efflux from mitochondria. It recently was determined from anisotropic elastic network modeling of entire microtubules that the frequencies of microtubule longitudinal axial eigenmodes lie in the region of tens of GHz for the physiologically common microtubule lengths. We calculated electric field generated by axial longitudinal vibration modes of microtubule, which model is based on subnanometer precision of charge distribution. Due to elastoelectric nature of the vibrations, the vibration wavelength is million-fold shorter than that of the electromagnetic field in free space and the electric field around the microtubule manifests rich spatial structure with multiple minima. The dielectrophoretic force exerted by electric field on the surrounding molecules will influence the kinetics of reactions via change in the probability of the transport of charge and mass particles. The electric field generated by vibrations of electrically polar cellular structures is expected to play a role in biological self-organization.

  14. The R.E.D. tools: advances in RESP and ESP charge derivation and force field library building.

    PubMed

    Dupradeau, François-Yves; Pigache, Adrien; Zaffran, Thomas; Savineau, Corentin; Lelong, Rodolphe; Grivel, Nicolas; Lelong, Dimitri; Rosanski, Wilfried; Cieplak, Piotr

    2010-07-28

    Deriving atomic charges and building a force field library for a new molecule are key steps when developing a force field required for conducting structural and energy-based analysis using molecular mechanics. Derivation of popular RESP charges for a set of residues is a complex and error prone procedure because it depends on numerous input parameters. To overcome these problems, the R.E.D. Tools (RESP and ESP charge Derive, ) have been developed to perform charge derivation in an automatic and straightforward way. The R.E.D. program handles chemical elements up to bromine in the periodic table. It interfaces different quantum mechanical programs employed for geometry optimization and computing molecular electrostatic potential(s), and performs charge fitting using the RESP program. By defining tight optimization criteria and by controlling the molecular orientation of each optimized geometry, charge values are reproduced at any computer platform with an accuracy of 0.0001 e. The charges can be fitted using multiple conformations, making them suitable for molecular dynamics simulations. R.E.D. allows also for defining charge constraints during multiple molecule charge fitting, which are used to derive charges for molecular fragments. Finally, R.E.D. incorporates charges into a force field library, readily usable in molecular dynamics computer packages. For complex cases, such as a set of homologous molecules belonging to a common family, an entire force field topology database is generated. Currently, the atomic charges and force field libraries have been developed for more than fifty model systems and stored in the RESP ESP charge DDataBase. Selected results related to non-polarizable charge models are presented and discussed.

  15. A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations.

    PubMed

    Duan, Yong; Wu, Chun; Chowdhury, Shibasish; Lee, Mathew C; Xiong, Guoming; Zhang, Wei; Yang, Rong; Cieplak, Piotr; Luo, Ray; Lee, Taisung; Caldwell, James; Wang, Junmei; Kollman, Peter

    2003-12-01

    Molecular mechanics models have been applied extensively to study the dynamics of proteins and nucleic acids. Here we report the development of a third-generation point-charge all-atom force field for proteins. Following the earlier approach of Cornell et al., the charge set was obtained by fitting to the electrostatic potentials of dipeptides calculated using B3LYP/cc-pVTZ//HF/6-31G** quantum mechanical methods. The main-chain torsion parameters were obtained by fitting to the energy profiles of Ace-Ala-Nme and Ace-Gly-Nme di-peptides calculated using MP2/cc-pVTZ//HF/6-31G** quantum mechanical methods. All other parameters were taken from the existing AMBER data base. The major departure from previous force fields is that all quantum mechanical calculations were done in the condensed phase with continuum solvent models and an effective dielectric constant of epsilon = 4. We anticipate that this force field parameter set will address certain critical short comings of previous force fields in condensed-phase simulations of proteins. Initial tests on peptides demonstrated a high-degree of similarity between the calculated and the statistically measured Ramanchandran maps for both Ace-Gly-Nme and Ace-Ala-Nme di-peptides. Some highlights of our results include (1) well-preserved balance between the extended and helical region distributions, and (2) favorable type-II poly-proline helical region in agreement with recent experiments. Backward compatibility between the new and Cornell et al. charge sets, as judged by overall agreement between dipole moments, allows a smooth transition to the new force field in the area of ligand-binding calculations. Test simulations on a large set of proteins are also discussed. Copyright 2003 Wiley Periodicals, Inc. J Comput Chem 24: 1999-2012, 2003

  16. Magnetic field concentration using ferromagnetic material to propel a wireless power transfer based micro-robot

    NASA Astrophysics Data System (ADS)

    Kim, Dongwook; Park, Bumjin; Park, Jaehyoung; Park, Hyun Ho; Ahn, Seungyoung

    2018-05-01

    In this paper, we propose a novel coil structure, using a ferromagnetic material which concentrates the magnetic field, as the propulsion system of a wireless power transfer (WPT) based micro-robot. This structure uses an incident magnetic field to induce current during wireless power transfer, to generate a Lorentz force. To prevent net cancelation of the Lorentz force in the load coil, ferrite films were applied to one side of the coil segment. The demonstrated simplicity and effectiveness of the proposed micro-robot showed its suitability for applications. Simulation and experimental results confirmed a velocity of 1.02 mm/s with 6 mW power transfer capacity for the 3 mm sized micro-robot.

  17. Numerical investigation for entropy generation in hydromagnetic flow of fluid with variable properties and slip

    NASA Astrophysics Data System (ADS)

    Khan, M. Ijaz; Hayat, Tasawar; Alsaedi, Ahmed

    2018-02-01

    This modeling and computations present the study of viscous fluid flow with variable properties by a rotating stretchable disk. Rotating flow is generated through nonlinear rotating stretching surface. Nonlinear thermal radiation and heat generation/absorption are studied. Flow is conducting for a constant applied magnetic field. No polarization is taken. Induced magnetic field is not taken into account. Attention is focused on the entropy generation rate and Bejan number. The entropy generation rate and Bejan number clearly depend on velocity and thermal fields. The von Kármán approach is utilized to convert the partial differential expressions into ordinary ones. These expressions are non-dimensionalized, and numerical results are obtained for flow variables. The effects of the magnetic parameter, Prandtl number, radiative parameter, heat generation/absorption parameter, and slip parameter on velocity and temperature fields as well as the entropy generation rate and Bejan number are discussed. Drag forces (radial and tangential) and heat transfer rates are calculated and discussed. Furthermore the entropy generation rate is a decreasing function of magnetic variable and Reynolds number. The Bejan number effect on the entropy generation rate is reverse to that of the magnetic variable. Also opposite behavior of heat transfers is observed for varying estimations of radiative and slip variables.

  18. Magnetic Flux Concentrations in Stratified Turbulent Plasma Due to Negative Effective Magnetic Pressure Instability

    NASA Astrophysics Data System (ADS)

    Jabbari, Sarah

    2015-08-01

    We study a system of a highly stratified turbulent plasma. In such a system, when the magnetic Reynolds number is large enough and there is a background field of suitable strength, a new effect will play role in con- centrating magnetic fields such that it leads to the formation of magnetic spots and bipolar regions. This effect is due to the fact that the turbu- lent pressure is suppressed by the large-scale magnetic field, which adds a negative term to the total mean-field (effective) pressure. This leads to an instability, which is known as the negative effective magnetic pressure instability (NEMPI). Direct numerical simulations (DNS) of isothermally forced turbulence have shown that NEMPI leads to the formation of spots in the presence of an imposed field. Our main aim now is to use NEMPI to explain the formation of active regions and sunspots. To achieve this goal, we need to move progressively to more realistic models. Here we extend our model by allowing the magnetic field to be generated by a dy- namo. A dynamo plays an important role in solar activity. Therefore, it is of interest to investigate NEMPI in the presence of dynamo-generated magnetic fields. Mean-field simulations (MFS) of such systems in spheri- cal geometry have shown how these two instabilities work in concert. In fact NEMPI will be activated as long as the strength of the magnetic field generated by the dynamo is in a proper range (for more detail see Jab- bari et al. 2013). In our new study, we use DNS to investigate a similar system. The turbulence is forced in the entire spherical shell, but the forc- ing is made helical in the lower 30% of the shell, similar to the model of Mitra et al. (2014). We perform simulations using the Pencil Code for different density contrasts and other input parameters. We applied ver- tical field boundary conditions in the r direction. The results show that, when the stratification is high enough, intense bipolar regions form and as time passes, they expand, merge and create giant structures. At the same time, the new structures appear at different latitudes. By extending in φ direction, the size of the bipolar regions decreases. When the helical zone is thinner, the structures appear at a later time.

  19. Density-Functional Theory with Dispersion-Correcting Potentials for Methane: Bridging the Efficiency and Accuracy Gap between High-Level Wave Function and Classical Molecular Mechanics Methods.

    PubMed

    Torres, Edmanuel; DiLabio, Gino A

    2013-08-13

    Large clusters of noncovalently bonded molecules can only be efficiently modeled by classical mechanics simulations. One prominent challenge associated with this approach is obtaining force-field parameters that accurately describe noncovalent interactions. High-level correlated wave function methods, such as CCSD(T), are capable of correctly predicting noncovalent interactions, and are widely used to produce reference data. However, high-level correlated methods are generally too computationally costly to generate the critical reference data required for good force-field parameter development. In this work we present an approach to generate Lennard-Jones force-field parameters to accurately account for noncovalent interactions. We propose the use of a computational step that is intermediate to CCSD(T) and classical molecular mechanics, that can bridge the accuracy and computational efficiency gap between them, and demonstrate the efficacy of our approach with methane clusters. On the basis of CCSD(T)-level binding energy data for a small set of methane clusters, we develop methane-specific, atom-centered, dispersion-correcting potentials (DCPs) for use with the PBE0 density-functional and 6-31+G(d,p) basis sets. We then use the PBE0-DCP approach to compute a detailed map of the interaction forces associated with the removal of a single methane molecule from a cluster of eight methane molecules and use this map to optimize the Lennard-Jones parameters for methane. The quality of the binding energies obtained by the Lennard-Jones parameters we obtained is assessed on a set of methane clusters containing from 2 to 40 molecules. Our Lennard-Jones parameters, used in combination with the intramolecular parameters of the CHARMM force field, are found to closely reproduce the results of our dispersion-corrected density-functional calculations. The approach outlined can be used to develop Lennard-Jones parameters for any kind of molecular system.

  20. Decay characteristics of electroadhesive forces by periodic electrodes in dielectric layers

    NASA Astrophysics Data System (ADS)

    Lee, Junseok; Cha, Youngsu

    2017-07-01

    Electroadhesive force is the force generated by induced dipoles in the gradient of an electric field. Owing to its benefits of mechanical characteristics and versatility, it is widely used to hold and manipulate objects in robotic applications. So far, most studies in this field have been focused on the maximization of the magnitude of electroadhesive force. In this paper, we focus on the decay characteristics of electroadhesive force depending on the spatial distance from electrodes to employ the force to precisely separate a single layer from stacked dielectric layers. It turns out that all configurations with periodically repeating electrodes' arrangement, have the same decay characteristics which significantly depend on the geometrical period of the electrode patterns. Also, we find that the other parameters including the applied voltage and geometry of electrodes have little effect on the decay characteristics. The electric potential of an arbitrary electrode configuration is expanded in terms of the Fourier series, and we use it to analytically prove the high dependence of decay characteristics on the geometrical period. Numerical analysis is performed using the finite element method.

  1. Rotatable Small Permanent Magnet Array for Ultra-Low Field Nuclear Magnetic Resonance Instrumentation: A Concept Study

    PubMed Central

    Vegh, Viktor; Reutens, David C.

    2016-01-01

    Object We studied the feasibility of generating the variable magnetic fields required for ultra-low field nuclear magnetic resonance relaxometry with dynamically adjustable permanent magnets. Our motivation was to substitute traditional electromagnets by distributed permanent magnets, increasing system portability. Materials and Methods The finite element method (COMSOL®) was employed for the numerical study of a small permanent magnet array to calculate achievable magnetic field strength, homogeneity, switching time and magnetic forces. A manually operated prototype was simulated and constructed to validate the numerical approach and to verify the generated magnetic field. Results A concentric small permanent magnet array can be used to generate strong sample pre-polarisation and variable measurement fields for ultra-low field relaxometry via simple prescribed magnet rotations. Using the array, it is possible to achieve a pre-polarisation field strength above 100 mT and variable measurement fields ranging from 20–50 μT with 200 ppm absolute field homogeneity within a field-of-view of 5 x 5 x 5 cubic centimetres. Conclusions A dynamic small permanent magnet array can generate multiple highly homogeneous magnetic fields required in ultra-low field nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI) instruments. This design can significantly reduce the volume and energy requirements of traditional systems based on electromagnets, improving portability considerably. PMID:27271886

  2. Generation of a wakefield undulator in plasma with transverse density gradient

    DOE PAGES

    Stupakov, Gennady V.

    2017-11-30

    Here, we show that a short relativistic electron beam propagating in a plasma with a density gradient perpendicular to the direction of motion generates a wakefield in which a witness bunch experiences a transverse force. A density gradient oscillating along the beam path would create a periodically varying force$-$an undulator, with an estimated strength of the equivalent magnetic field more than ten Tesla. This opens an avenue for creation of a high-strength, short-period undulators, which eventually may lead to all-plasma, free electron lasers where a plasma wakefield acceleration is naturally combined with a plasma undulator in a unifying, compact setup.

  3. Generation of a wakefield undulator in plasma with transverse density gradient

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stupakov, Gennady V.

    Here, we show that a short relativistic electron beam propagating in a plasma with a density gradient perpendicular to the direction of motion generates a wakefield in which a witness bunch experiences a transverse force. A density gradient oscillating along the beam path would create a periodically varying force$-$an undulator, with an estimated strength of the equivalent magnetic field more than ten Tesla. This opens an avenue for creation of a high-strength, short-period undulators, which eventually may lead to all-plasma, free electron lasers where a plasma wakefield acceleration is naturally combined with a plasma undulator in a unifying, compact setup.

  4. The influence of spatially and temporally high-resolution wind forcing on the power input to near-inertial waves in the ocean

    NASA Astrophysics Data System (ADS)

    Rimac, A.; Eden, C.; von Storch, J.

    2012-12-01

    Coexistence of stable stratification, the meridional overturning circulation and meso-scale eddies and their influence on the ocean's circulation still raise complex questions concerning the ocean energetics. Oceanic general circulation is mainly forced by the wind field and deep water tides. Its essential energetics are the conversion of kinetic energy of the winds and tides into oceanic potential and kinetic energy. Energy needed for the circulation is bound to internal wave fields. Direct internal wave generation by the wind at the sea surface is one of the sources of this energy. Previous studies using mixed-layer type of models and low frequency wind forcings (six-hourly and daily) left room for improvement. Using mixed-layer models it is not possible to assess the distribution of near-inertial energy into the deep ocean. Also, coarse temporal resolution of wind forcing strongly underestimates the near-inertial wave energy. To overcome this difficulty we use a high resolution ocean model with high frequency wind forcings. We establish the following model setup: We use the Max Planck Institute Ocean Model (MPIOM) on a tripolar grid with 45km horizontal resolution and 40 vertical levels. We run the model with wind forcings that vary in horizontal (250km versus 40km) and temporal resolution (six versus one-hourly). In our study we answer the following questions: How big is the wind kinetic energy input to the near-inertial waves? Is the kinetic energy of the near-inertial waves enhanced when high-frequency wind forcings are used? If so, by how much and why, due to higher level of temporal wind variability or due to better spatial representation of the near-inertial waves? How big is the total power of near-inertial waves generated by the wind at the surface of the ocean? We run the model for one year. Our model results show that the near-inertial waves are excited both using wind forcings of high and low horizontal and temporal resolution. Near-inertial energy is almost two times higher when we force the model with high frequency wind forcings. The influence on the energy mostly depends on the time difference between two forcing fields while the spatial difference has little influence.

  5. Combining experimental and simulation data of molecular processes via augmented Markov models.

    PubMed

    Olsson, Simon; Wu, Hao; Paul, Fabian; Clementi, Cecilia; Noé, Frank

    2017-08-01

    Accurate mechanistic description of structural changes in biomolecules is an increasingly important topic in structural and chemical biology. Markov models have emerged as a powerful way to approximate the molecular kinetics of large biomolecules while keeping full structural resolution in a divide-and-conquer fashion. However, the accuracy of these models is limited by that of the force fields used to generate the underlying molecular dynamics (MD) simulation data. Whereas the quality of classical MD force fields has improved significantly in recent years, remaining errors in the Boltzmann weights are still on the order of a few [Formula: see text], which may lead to significant discrepancies when comparing to experimentally measured rates or state populations. Here we take the view that simulations using a sufficiently good force-field sample conformations that are valid but have inaccurate weights, yet these weights may be made accurate by incorporating experimental data a posteriori. To do so, we propose augmented Markov models (AMMs), an approach that combines concepts from probability theory and information theory to consistently treat systematic force-field error and statistical errors in simulation and experiment. Our results demonstrate that AMMs can reconcile conflicting results for protein mechanisms obtained by different force fields and correct for a wide range of stationary and dynamical observables even when only equilibrium measurements are incorporated into the estimation process. This approach constitutes a unique avenue to combine experiment and computation into integrative models of biomolecular structure and dynamics.

  6. Combined free and forced convection heat transfer in magneto fluid mechanic pipe flow

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gardner, R.A.; Lo, Y.T.

    1977-01-01

    A study is made of fully developed, laminar, free-and-forced convection heat transfer in an electrically conducting fluid flowing in an electrically insulated, horizontal, circular pipe in a vertical transverse magnetic field. The normalized magnetofluidmechanic and energy equations are reduced to three coupled partial differential equations by the introduction of a stream function of the secondary flow. A perturbation solution is generated in inverse powers of the Lykoudis number, Ly = M/sup 2//..sqrt..Gr, which yields the influence of the magnetic field on the stream function of the secondary flow, axial velocity profiles, temperature profiles, and Nusselt number. 6 figures, 1 table.

  7. Characteristics of dust voids in a strongly coupled laboratory dusty plasma

    NASA Astrophysics Data System (ADS)

    Bailung, Yoshiko; Deka, T.; Boruah, A.; Sharma, S. K.; Pal, A. R.; Chutia, Joyanti; Bailung, H.

    2018-05-01

    A void is produced in a strongly coupled dusty plasma by inserting a cylindrical pin (˜0.1 mm diameter) into a radiofrequency discharge argon plasma. The pin is biased externally below the plasma potential to generate the dust void. The Debye sheath model is used to obtain the sheath potential profile and hence to estimate the electric field around the pin. The electric field force and the ion drag force on the dust particles are estimated and their balance accounts well for the maintenance of the size of the void. The effects of neutral density as well as dust density on the void size are studied.

  8. Cryogenically enhanced magneto-Archimedes levitation

    NASA Astrophysics Data System (ADS)

    Catherall, A. T.; López-Alcaraz, P.; Benedict, K. A.; King, P. J.; Eaves, L.

    2005-05-01

    The application of both a strong magnetic field and magnetic field gradient to a diamagnetic body can produce a vertical force which is sufficient to counteract its weight due to gravity. By immersing the body in a paramagnetic fluid, an additional adjustable magneto-buoyancy force is generated which enhances the levitation effect. Here we show that cryogenic oxygen and oxygen-nitrogen mixtures in both gaseous and liquid form provide sufficient buoyancy to permit the levitation and flotation of a wide range of materials. These fluids may provide an alternative to synthetic ferrofluids for the separation of minerals. We also report the dynamics of corrugation instabilities on the surface of magnetized liquid oxygen.

  9. Generation of coronal electric currents due to convective motions on the photosphere

    NASA Astrophysics Data System (ADS)

    Sakurai, T.; Levine, R. H.

    1981-09-01

    Generation of electric currents in a magnetized plasma overlying a dense convective layer is studied, assuming that the magnetic field perturbation is small and satisfies the force-free equation. Currents are produced by rotational motions on the boundary in the case of a uniform equilibrium field. In a simple two-dimensional bipolar configuration, however, both irrotational and incompressible motions give rise to currents, and the current density has a peak at the magnetic neutral line. Scaling laws for the current density as well as for the stored magnetic energy are derived, and the possibility of heating the solar corona through the dissipation of coronal currents generated in this way is discussed.

  10. Generation of coronal electric currents due to convective motions on the photosphere

    NASA Technical Reports Server (NTRS)

    Sakurai, T.; Levine, R. H.

    1981-01-01

    Generation of electric currents in a magnetized plasma overlying a dense convective layer is studied, assuming that the magnetic field perturbation is small and satisfies the force-free equation. Currents are produced by rotational motions on the boundary in the case of a uniform equilibrium field. In a simple two-dimensional bipolar configuration, however, both irrotational and incompressible motions give rise to currents, and the current density has a peak at the magnetic neutral line. Scaling laws for the current density as well as for the stored magnetic energy are derived, and the possibility of heating the solar corona through the dissipation of coronal currents generated in this way is discussed.

  11. The Role of Nongyrotropy in Balancing the Reconnection Diffusion Region

    NASA Astrophysics Data System (ADS)

    Hesse, M.; Liu, Y. H.; Chen, L. J.; Bessho, N.; Wang, S.; Burch, J. L.; Moretto, T.; Genestreti, K.; Phan, T.; Tenfjord, P.

    2017-12-01

    The structure of the reconnection diffusion region is, to a large degree, determined by the requirement to balance both the current flow and its dissipation processes, and the forces exerted onto the current layer by the inflow magnetic pressure. These balances are critical: without resupply processes, the transport of accelerated and current-carrying particles away from the diffusion region would generate a current density depletion, which, in principle, could lead to a mismatch with the curl of the magnetic field. Similarly, without heating processes, the convection of hot plasma away from the diffusion region would generate a force imbalance with the ambient magnetic field. The fact that neither of these imbalances occur is a consequence of the reconnection electric field, which is therefore not only required to facilitate magnetic flux transport, but also to provide the energization required to maintain balance in the diffusion region. In this presentation, we will use particle-in-cell simulations to analyze these balance conditions. We will furthermore show that nongyrotropic particle dynamics plays a key role both as current dissipation mechanism, and as overall heating mechanism in the diffusion region current layer.

  12. Novel approaches to optomechanical transduction

    NASA Astrophysics Data System (ADS)

    Cernotik, Ondrej; Hammerer, Klemens

    In recent years, mechanical oscillators received attention as a promising tool for frequency conversion between microwaves and light. A general, bi-directional transducer with high efficiency is still far from reach of current technology; finding new strategies for optomechanical transduction allows us to relax the requirements and bring these systems closer to an experimental realization. An interesting example is generation of entanglement between two superconducting qubits using measurement and postselection. Here, the mechanical oscillators interacts directly with the superconducting transmon qubit in such a way that it feels a qubit-state dependent force. This force can then be read out using a cavity field; reading out two such systems sequentially realizes an effective total spin measurement. Starting from a suitable initial state and employing postselection, entanglement can be generated. Another interesting approach is to use an array of optomechanical transducers in which the output fields of one transducer are fed into the input of the next. The periodicity of the array results in a joint dispersion relation for the propagating microwave and optical fields. The resulting structure can be used to control the conversion bandwidth and forward and backward scattering.

  13. On the unique structure of the magnetic fields of Uranus and Neptune

    NASA Technical Reports Server (NTRS)

    Dolginov, Sh. SH.

    1993-01-01

    The magnetic fields of Uranus and Neptune, which have comparable dipole, quadrupole, and octupole harmonics, are unique in the present-day solar system, but they resemble the geomagnetic field at the epochs of excursions and reversals known from paleomagnetic data. The precession dynamo model, in which the dominant role in the generation of the planetary magnetic fields is played by external gravitational forces, allows us to propose two scenarios for the formation of the unique topology of the magnetic fields of Uranus and Neptune. In the first case, tidal flows in the 'oceans' of these two planets extend down to the depths where the matter has a noticeable electric conductivity and velocity. A hydromagnetic interaction of the moving conducting fluid with the planetary magnetic field outside the generation region results in the deformation of the field and the deceleration of the motion under the action of the radial magnetic field. In the second case, the deformation of the field facilitates drastic changes in cyclonic cells within the generation region causing instabilities that result in a multi-polar field structure, excursions, and inversions. This paper considers this problem in greater detail by using the Neptune-Triton system as an example.

  14. Eddy Current Analysis and Optimization for Superconducting Magnetic Bearing of Flywheel Energy Storage System

    NASA Astrophysics Data System (ADS)

    Arai, Yuuki; Yamashita, Tomohisa; Hasegawa, Hitoshi; Matsuoka, Taro; Kaimori, Hiroyuki; Ishihara, Terumasa

    Levitation and guidance force is electromagnetic generated between a superconducting coil and zero field cooled bulk superconductors used in our flywheel energy storage system (FESS). Because the magnetic field depends on the configuration of the coil and the bulks, the eccentricity and the vibration of a rotor cause fluctuation in the magnetic field which induces eddy current and consequent Joule heat on electric conductors such as cooling plates. Heat generation in the cryogenic region critically reduces the efficiency of the FESS. In this paper, we will report the result of the electromagnetic analysis of the SMB and propose an optimal divided cooling plate for reducing the eddy current and Joule heat.

  15. Chaos as an intermittently forced linear system.

    PubMed

    Brunton, Steven L; Brunton, Bingni W; Proctor, Joshua L; Kaiser, Eurika; Kutz, J Nathan

    2017-05-30

    Understanding the interplay of order and disorder in chaos is a central challenge in modern quantitative science. Approximate linear representations of nonlinear dynamics have long been sought, driving considerable interest in Koopman theory. We present a universal, data-driven decomposition of chaos as an intermittently forced linear system. This work combines delay embedding and Koopman theory to decompose chaotic dynamics into a linear model in the leading delay coordinates with forcing by low-energy delay coordinates; this is called the Hankel alternative view of Koopman (HAVOK) analysis. This analysis is applied to the Lorenz system and real-world examples including Earth's magnetic field reversal and measles outbreaks. In each case, forcing statistics are non-Gaussian, with long tails corresponding to rare intermittent forcing that precedes switching and bursting phenomena. The forcing activity demarcates coherent phase space regions where the dynamics are approximately linear from those that are strongly nonlinear.The huge amount of data generated in fields like neuroscience or finance calls for effective strategies that mine data to reveal underlying dynamics. Here Brunton et al.develop a data-driven technique to analyze chaotic systems and predict their dynamics in terms of a forced linear model.

  16. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kim, Jong Hun; Park, Jeong Young, E-mail: jhjung@inha.ac.kr, E-mail: jeongypark@kaist.ac.kr; Graduate School of EEWS, Korea Advanced Institute of Science and Technology

    Study of the triboelectric charging effect has recently gained much attraction by proposing a new potential technical application in the field of energy harvesting. Transparent polydimethylsiloxane (PDMS) has some advantages in employing the triboelectric effect due to good conformity at nanometer scale and the simple fabrication process. In this study, we demonstrate that UV irradiation can enhance the performance of a PDMS-based nanotribogenerator. Contact atomic force microscopy combined with Kelvin probe force microscopy enables an in-depth investigation of the effect of UV illumination on local triboelectric charge generation and its decay in PDMS. We found that UV exposure not onlymore » facilitates triboelectric charge generation but also enhances charge redistribution, which is related to the wettability of the PDMS surface. This study provides insights into the fundamental understanding and design of triboelectric generator devices.« less

  17. Sliding mode control of electromagnetic tethered satellite formation

    NASA Astrophysics Data System (ADS)

    Hallaj, Mohammad Amin Alandi; Assadian, Nima

    2016-08-01

    This paper investigates the control of tethered satellite formation actuated by electromagnetic dipoles and reaction wheels using the robust sliding mode control technique. Generating electromagnetic forces and moments by electric current coils provides an attractive control actuation alternative for tethered satellite system due to the advantages of no propellant consumption and no obligatory rotational motion. Based on a dumbbell model of tethered satellite in which the flexibility and mass of the tether is neglected, the equations of motion in Cartesian coordinate are derived. In this model, the J2 perturbation is taken into account. The far-field and mid-field models of electromagnetic forces and moments of two satellites on each other and the effect of the Earth's magnetic field are presented. A robust sliding mode controller is designed for precise trajectory tracking purposes and to deal with the electromagnetic force and moment uncertainties and external disturbances due to the Earth's gravitational and magnetic fields inaccuracy. Numerical simulation results are presented to validate the effectiveness of the developed controller and its superiority over the linear controller.

  18. Laboratory Evidence That Line-Tied Toroidal Magnetic Fields Can Suppress Loss-of-Equilibrium Flux Rope Eruptions in the Solar Corona

    NASA Astrophysics Data System (ADS)

    Myers, C. E.; Yamada, M.; Belova, E.; Ji, H.; Yoo, J.; Fox, W. R., II; Jara-Almonte, J.

    2014-12-01

    Loss-of-equilibrium mechanisms such as the ideal torus instability [Kliem & Török, Phys. Rev. Lett. 96, 255002 (2006)] are predicted to drive arched flux ropes in the solar corona to erupt. In recent line-tied flux rope experiments conducted in the Magnetic Reconnection Experiment (MRX), however, we find that quasi-statically driven flux ropes remain confined well beyond the predicted torus instability threshold. In order to understand this behavior, in situ measurements from a 300 channel 2D magnetic probe array are used to comprehensively analyze the force balance between the external (potential) and internal (plasma-generated) magnetic fields. We find that forces due to the line-tied toroidal magnetic field, which are not included in the basic torus instability theory, can play a major role in preventing eruptions. The dependence of these toroidal magnetic forces on various potential field and flux rope parameters will be discussed. This research is supported by DoE Contract Number DE-AC02-09CH11466 and by the NSF/DoE Center for Magnetic Self-Organization (CMSO).

  19. Experimental and Numerical Studies of Mechanically- and Convectively-Driven Turbulence in Planetary Interiors

    NASA Astrophysics Data System (ADS)

    Grannan, Alexander Michael

    2017-08-01

    The energy for driving turbulent flows in planetary fluid layers comes from a combination of thermocompositional sources and the motion of the boundary in contact with the fluid through mechanisms like precessional, tidal, and librational forcing. Characterizing the resulting turbulent fluid motions are necessary for understanding many aspects of the planet's dynamics and evolution including the generation of magnetic fields in the electrically conducting fluid layers and dissipation in the oceans. Although such flows are strongly inertial they are also strongly influenced by the Coriolis force whose source is in the rotation of the body and tends to constrain the inertial effects and provide support for fluid instabilities that might in-turn generate turbulence. Furthermore, the magnetic fields generated by the electrically conducting fluids act back on the fluid through the Lorentz force that also tends to constrain the flow. The goal of this dissertation is to investigate the characteristics of turbulent flows under the influence of mechanical, convective, rotational and magnetic forcing. In order to investigate the response of the fluid to mechanical forcing, I have modified a unique set of laboratory experiments that allows me to quantify the generation of turbulence driven by the periodic oscillations of the fluid containing boundary through tides and libration. These laboratory experiments replicate the fundamental ingredients found in planetary environments and are necessary for the excitation of instabilities that drive the turbulent fluid motions. For librational forcing, a rigid ellipsoidal container and ellipsoidal shell of isothermal unstratified fluid is made to rotate with a superimposed oscillation while, for tidal forcing, an elastic ellipsoidal container of isothermal unstratified fluid is made to rotate while an independently rotating perturbance also flexes the elastic container. By varying the strength and frequencies of these oscillations the characteristics of the resulting turbulence are investigated using meridional views to identify the dominate modes and spatial location of the turbulence. For the first time, measurements of the velocity in the equatorial plane are coupled with high resolution numerical simulations of the full flow field in identical geometry to characterize the instability mechanism, energy deposited into the fluid layer, and long-term evolution of the flow. The velocities determined through laboratory and numerical simulations when extrapolated to planets allow me to argue that the dynamics of mechanical forcing in low viscosity fluids may an important role as new and potentially large source of dissipation in planetary interiors. To study convective forcing, I have modified and performed a set of rotating and non-rotating hydrodynamic convection experiments using water as well as rotating and non-rotating magnetohydrodynamic convection in gallium. These studies are performed in a cylindrical geometry representing a model of high latitude planetary core style convection wherein the axis of rotation and gravity are aligned. For the studies using water, the steady columns that are characteristic of rotating convection and present in the dynamo models are likely to destabilize at the more extreme planetary parameters giving way to transitions to more complex styles of rotating turbulent flow. In the studies of liquid metal where the viscosity is lower, the onset of rotating convection occurs through oscillatory columnar convection well below the onset of steady columns. Such oscillatory modes are not represented at the parameters used by current dynamo models. Furthermore a suite of laboratory experiments shows that the imposition of rotational forces and magnetic forces both separately and together generate zeroeth order flow transitions that change the fundamental convective modes and heat transfer. Such regimes are more easily accessible to laboratory experiments then to numerical simulations but demonstrate the need for a new generation of dynamo simulations capable of including the fundamental properties of liquid metals as are relevant for understanding the dynamics of planetary interiors.

  20. The Impact of Model and Rainfall Forcing Errors on Characterizing Soil Moisture Uncertainty in Land Surface Modeling

    NASA Technical Reports Server (NTRS)

    Maggioni, V.; Anagnostou, E. N.; Reichle, R. H.

    2013-01-01

    The contribution of rainfall forcing errors relative to model (structural and parameter) uncertainty in the prediction of soil moisture is investigated by integrating the NASA Catchment Land Surface Model (CLSM), forced with hydro-meteorological data, in the Oklahoma region. Rainfall-forcing uncertainty is introduced using a stochastic error model that generates ensemble rainfall fields from satellite rainfall products. The ensemble satellite rain fields are propagated through CLSM to produce soil moisture ensembles. Errors in CLSM are modeled with two different approaches: either by perturbing model parameters (representing model parameter uncertainty) or by adding randomly generated noise (representing model structure and parameter uncertainty) to the model prognostic variables. Our findings highlight that the method currently used in the NASA GEOS-5 Land Data Assimilation System to perturb CLSM variables poorly describes the uncertainty in the predicted soil moisture, even when combined with rainfall model perturbations. On the other hand, by adding model parameter perturbations to rainfall forcing perturbations, a better characterization of uncertainty in soil moisture simulations is observed. Specifically, an analysis of the rank histograms shows that the most consistent ensemble of soil moisture is obtained by combining rainfall and model parameter perturbations. When rainfall forcing and model prognostic perturbations are added, the rank histogram shows a U-shape at the domain average scale, which corresponds to a lack of variability in the forecast ensemble. The more accurate estimation of the soil moisture prediction uncertainty obtained by combining rainfall and parameter perturbations is encouraging for the application of this approach in ensemble data assimilation systems.

  1. Deterrence Without Escalation:A Case for the Arctic in 2040

    DTIC Science & Technology

    2015-04-08

    electromagnetic pulse (EMP) from a nuclear blast.69 Typical shielding used to protect an asset from an EMP generated by a nuclear blast is...weapons could travel at hypersonic speeds, but the beam must propagate through a plasma field—the same plasma field that causes the ‘radio blackout...Blechman and Stephen S Kaplan, Force Without War: U.S. Armed Forces as a Political Instrument. (Washington, DC: The Brookings Institution, 1978), 4

  2. Dendrimer Interactions with Lipid Bilayer: Comparison of Force Field and Effect of Implicit vs Explicit Solvation.

    PubMed

    Kanchi, Subbarao; Gosika, Mounika; Ayappa, K G; Maiti, Prabal K

    2018-06-13

    The understanding of dendrimer interactions with cell membranes has great importance in drug/gene delivery based therapeutics. Although molecular simulations have been used to understand the nature of dendrimer interactions with lipid membranes, its dependency on available force field parameters is poorly understood. In this study, we have carried out fully atomistic molecular dynamics (MD) simulations of a protonated G3 poly(amido amine) (PAMAM) dendrimer-dimyristoylphosphatidylcholine (DMPC) lipid bilayer complex using three different force fields (FFs) namely, CHARMM, GAFF, and GROMOS in the presence of explicit water to understand the structure of the lipid-dendrimer complex and nature of their interaction. CHARMM and GAFF dendrimers initially in contact with the lipid head groups were found to move away from the lipid bilayer during the course of simulation; however, the dendrimer remained strongly bound to the lipid head groups with the GROMOS FF. Potential of the mean force (PMF) computations of the dendrimer along the bilayer normal showed a repulsive barrier (∼20 kcal/mol) between dendrimer and lipid bilayer in the case of CHARMM and GAFF force fields. In contrast, an attractive interaction (∼40 kcal/mol) is obtained with the GROMOS force field, consistent with experimental observations of membrane binding observed with lower generation G3 PAMAM dendrimers. This difference with the GROMOS dendrimer is attributed to the strong dendrimer-lipid interaction and lowered surface hydration of the dendrimer. Assessing the role of solvent, we find that the CHARMM and GAFF dendrimers strongly bind to the lipid bilayer with an implicit solvent (Generalized Born) model, whereas binding is not observed with explicit water (TIP3P). The opposing nature of dendrimer-membrane interactions in the presence of explicit and implicit solvents demonstrates that hydration effects play an important role in modulating the dendrimer-lipid interaction warranting a case for refinement of the existing dendrimer/lipid force fields.

  3. Learning to push and learning to move: the adaptive control of contact forces

    PubMed Central

    Casadio, Maura; Pressman, Assaf; Mussa-Ivaldi, Ferdinando A.

    2015-01-01

    To be successful at manipulating objects one needs to apply simultaneously well controlled movements and contact forces. We present a computational theory of how the brain may successfully generate a vast spectrum of interactive behaviors by combining two independent processes. One process is competent to control movements in free space and the other is competent to control contact forces against rigid constraints. Free space and rigid constraints are singularities at the boundaries of a continuum of mechanical impedance. Within this continuum, forces and motions occur in “compatible pairs” connected by the equations of Newtonian dynamics. The force applied to an object determines its motion. Conversely, inverse dynamics determine a unique force trajectory from a movement trajectory. In this perspective, we describe motor learning as a process leading to the discovery of compatible force/motion pairs. The learned compatible pairs constitute a local representation of the environment's mechanics. Experiments on force field adaptation have already provided us with evidence that the brain is able to predict and compensate the forces encountered when one is attempting to generate a motion. Here, we tested the theory in the dual case, i.e., when one attempts at applying a desired contact force against a simulated rigid surface. If the surface becomes unexpectedly compliant, the contact point moves as a function of the applied force and this causes the applied force to deviate from its desired value. We found that, through repeated attempts at generating the desired contact force, subjects discovered the unique compatible hand motion. When, after learning, the rigid contact was unexpectedly restored, subjects displayed after effects of learning, consistent with the concurrent operation of a motion control system and a force control system. Together, theory and experiment support a new and broader view of modularity in the coordinated control of forces and motions. PMID:26594163

  4. An experimental investigation of flow around a vehicle passing through a tornado

    NASA Astrophysics Data System (ADS)

    Suzuki, Masahiro; Obara, Kouhei; Okura, Nobuyuki

    2016-03-01

    Flow around a vehicle running through a tornado was investigated experimentally. A tornado simulator was developed to generate a tornado-like swirl flow. PIV study confirmed that the simulator generates two-celled vortices which are observed in the natural tornadoes. A moving test rig was developed to run a 1/40 scaled train-shaped model vehicle under the tornado simulator. The car contained pressure sensors, a data logger with an AD converter to measure unsteady surface pressures during its run through the swirling flow. Aerodynamic forces acting on the vehicle were estimated from the pressure data. The results show that the aerodynamic forces change its magnitude and direction depending on the position of the car in the swirling flow. The asymmetry of the forces about the vortex centre suggests the vehicle itself may deform the flow field.

  5. Efficient solution of the Wigner-Liouville equation using a spectral decomposition of the force field

    NASA Astrophysics Data System (ADS)

    Van de Put, Maarten L.; Sorée, Bart; Magnus, Wim

    2017-12-01

    The Wigner-Liouville equation is reformulated using a spectral decomposition of the classical force field instead of the potential energy. The latter is shown to simplify the Wigner-Liouville kernel both conceptually and numerically as the spectral force Wigner-Liouville equation avoids the numerical evaluation of the highly oscillatory Wigner kernel which is nonlocal in both position and momentum. The quantum mechanical evolution is instead governed by a term local in space and non-local in momentum, where the non-locality in momentum has only a limited range. An interpretation of the time evolution in terms of two processes is presented; a classical evolution under the influence of the averaged driving field, and a probability-preserving quantum-mechanical generation and annihilation term. Using the inherent stability and reduced complexity, a direct deterministic numerical implementation using Chebyshev and Fourier pseudo-spectral methods is detailed. For the purpose of illustration, we present results for the time-evolution of a one-dimensional resonant tunneling diode driven out of equilibrium.

  6. A Maximum-Likelihood Approach to Force-Field Calibration.

    PubMed

    Zaborowski, Bartłomiej; Jagieła, Dawid; Czaplewski, Cezary; Hałabis, Anna; Lewandowska, Agnieszka; Żmudzińska, Wioletta; Ołdziej, Stanisław; Karczyńska, Agnieszka; Omieczynski, Christian; Wirecki, Tomasz; Liwo, Adam

    2015-09-28

    A new approach to the calibration of the force fields is proposed, in which the force-field parameters are obtained by maximum-likelihood fitting of the calculated conformational ensembles to the experimental ensembles of training system(s). The maximum-likelihood function is composed of logarithms of the Boltzmann probabilities of the experimental conformations, calculated with the current energy function. Because the theoretical distribution is given in the form of the simulated conformations only, the contributions from all of the simulated conformations, with Gaussian weights in the distances from a given experimental conformation, are added to give the contribution to the target function from this conformation. In contrast to earlier methods for force-field calibration, the approach does not suffer from the arbitrariness of dividing the decoy set into native-like and non-native structures; however, if such a division is made instead of using Gaussian weights, application of the maximum-likelihood method results in the well-known energy-gap maximization. The computational procedure consists of cycles of decoy generation and maximum-likelihood-function optimization, which are iterated until convergence is reached. The method was tested with Gaussian distributions and then applied to the physics-based coarse-grained UNRES force field for proteins. The NMR structures of the tryptophan cage, a small α-helical protein, determined at three temperatures (T = 280, 305, and 313 K) by Hałabis et al. ( J. Phys. Chem. B 2012 , 116 , 6898 - 6907 ), were used. Multiplexed replica-exchange molecular dynamics was used to generate the decoys. The iterative procedure exhibited steady convergence. Three variants of optimization were tried: optimization of the energy-term weights alone and use of the experimental ensemble of the folded protein only at T = 280 K (run 1); optimization of the energy-term weights and use of experimental ensembles at all three temperatures (run 2); and optimization of the energy-term weights and the coefficients of the torsional and multibody energy terms and use of experimental ensembles at all three temperatures (run 3). The force fields were subsequently tested with a set of 14 α-helical and two α + β proteins. Optimization run 1 resulted in better agreement with the experimental ensemble at T = 280 K compared with optimization run 2 and in comparable performance on the test set but poorer agreement of the calculated folding temperature with the experimental folding temperature. Optimization run 3 resulted in the best fit of the calculated ensembles to the experimental ones for the tryptophan cage but in much poorer performance on the training set, suggesting that use of a small α-helical protein for extensive force-field calibration resulted in overfitting of the data for this protein at the expense of transferability. The optimized force field resulting from run 2 was found to fold 13 of the 14 tested α-helical proteins and one small α + β protein with the correct topologies; the average structures of 10 of them were predicted with accuracies of about 5 Å C(α) root-mean-square deviation or better. Test simulations with an additional set of 12 α-helical proteins demonstrated that this force field performed better on α-helical proteins than the previous parametrizations of UNRES. The proposed approach is applicable to any problem of maximum-likelihood parameter estimation when the contributions to the maximum-likelihood function cannot be evaluated at the experimental points and the dimension of the configurational space is too high to construct histograms of the experimental distributions.

  7. Generation of Rising-tone Chorus in a Two-dimensional Mirror Field by Using the General Curvilinear PIC Code

    NASA Astrophysics Data System (ADS)

    Ke, Y.; Gao, X.; Lu, Q.; Wang, X.; Wang, S.

    2017-12-01

    Recently, the generation of rising-tone chorus has been implemented with one-dimensional (1-D) particle-in-cell (PIC) simulations in an inhomogeneous background magnetic field, where both the propagation of waves and motion of electrons are simply forced to be parallel to the background magnetic field. We have developed a two-dimensional(2-D) general curvilinear PIC simulation code, and successfully reproduced rising-tone chorus waves excited from an anisotropic electron distribution in a 2-D mirror field. Our simulation results show that whistler waves are mainly generated around the magnetic equator, and continuously gain growth during their propagation toward higher-latitude regions. The rising-tone chorus waves are formed off the magnetic equator, which propagate quasi-parallel to the background magnetic field with the finite wave normal angle. Due to the propagating effect, the wave normal angle of chorus waves is increasing during their propagation toward higher-latitude regions along an enough curved field line. The chirping rate of chorus waves are found to be larger along a field line more close to the middle field line in the mirror field.

  8. Evolution of the magnetorotational instability on initially tangled magnetic fields

    NASA Astrophysics Data System (ADS)

    Bhat, Pallavi; Ebrahimi, Fatima; Blackman, Eric G.; Subramanian, Kandaswamy

    2017-12-01

    The initial magnetic field of previous magnetorotational instability (MRI) simulations has always included a significant system-scale component, even if stochastic. However, it is of conceptual and practical interest to assess whether the MRI can grow when the initial field is turbulent. The ubiquitous presence of turbulent or random flows in astrophysical plasmas generically leads to a small-scale dynamo (SSD), which would provide initial seed turbulent velocity and magnetic fields in the plasma that becomes an accretion disc. Can the MRI grow from these more realistic initial conditions? To address this, we supply a standard shearing box with isotropically forced SSD generated magnetic and velocity fields as initial conditions and remove the forcing. We find that if the initially supplied fields are too weak or too incoherent, they decay from the initial turbulent cascade faster than they can grow via the MRI. When the initially supplied fields are sufficient to allow MRI growth and sustenance, the saturated stresses, large-scale fields and power spectra match those of the standard zero net flux MRI simulation with an initial large-scale vertical field.

  9. Parametric Transformation Analysis

    NASA Technical Reports Server (NTRS)

    Gary, G. Allan

    2003-01-01

    Because twisted coronal features are important proxies for predicting solar eruptive events, and, yet not clearly understood, we present new results to resolve the complex, non-potential magnetic field configurations of active regions. This research uses free-form deformation mathematics to generate the associated coronal magnetic field. We use a parametric representation of the magnetic field lines such that the field lines can be manipulated to match the structure of EUV and SXR coronal loops. The objective is to derive sigmoidal magnetic field solutions which allows the beta greater than 1 regions to be included, aligned and non-aligned electric currents to be calculated, and the Lorentz force to be determined. The advantage of our technique is that the solution is independent of the unknown upper and side boundary conditions, allows non-vanishing magnetic forces, and provides a global magnetic field solution, which contains high- and low-beta regimes and is consistent with all the coronal images of the region. We show that the mathematical description is unique and physical.

  10. Faraday rotation signatures of fluctuation dynamos in young galaxies

    NASA Astrophysics Data System (ADS)

    Sur, Sharanya; Bhat, Pallavi; Subramanian, Kandaswamy

    2018-03-01

    Observations of Faraday rotation through high-redshift galaxies have revealed that they host coherent magnetic fields that are of comparable strengths to those observed in nearby galaxies. These fields could be generated by fluctuation dynamos. We use idealized numerical simulations of such dynamos in forced compressible turbulence up to rms Mach number of 2.4 to probe the resulting rotation measure (RM) and the degree of coherence of the magnetic field. We obtain rms values of RM at dynamo saturation of the order of 45-55 per cent of the value expected in a model where fields are assumed to be coherent on the forcing scale of turbulence. We show that the dominant contribution to the RM in subsonic and transonic cases comes from the general sea of volume filling fields, rather than from the rarer structures. However, in the supersonic case, strong field regions as well as moderately overdense regions contribute significantly. Our results can account for the observed RMs in young galaxies.

  11. Triple Track: A New Paradigm for Developing Air Force Officers

    DTIC Science & Technology

    2017-03-06

    multiple career fields, including aircraft maintenance, command and control, engineering , modeling analysis, joint targeting, program management...the opportunity for an engineering job because he was too critical in his career field. The member ultimately left the service.41 Critical manning...manpower, and officer training. Over the course of her career , she was responsible for generating over 956 C-130 aircraft sorties, led interagency efforts

  12. Rippled graphene in an in-plane magnetic field: effects of a random vector potential.

    PubMed

    Lundeberg, Mark B; Folk, Joshua A

    2010-10-01

    We report measurements of the effects of a random vector potential generated by applying an in-plane magnetic field to a graphene flake. Magnetic flux through the ripples cause orbital effects: Phase-coherent weak localization is suppressed, while quasirandom Lorentz forces lead to anisotropic magnetoresistance. Distinct signatures of these two effects enable the ripple size to be characterized.

  13. A mixed pseudospectral/finite difference method for a thermally driven fluid in a nonuniform gravitational field

    NASA Technical Reports Server (NTRS)

    Macaraeg, M. G.

    1985-01-01

    A numerical study of the steady, axisymmetric flow in a heated, rotating spherical shell is conducted to model the Atmospheric General Circulation Experiment (AGCE) proposed to run aboard a later shuttle mission. The AGCE will consist of concentric rotating spheres confining a dielectric fluid. By imposing a dielectric field across the fluid a radial body force will be created. The numerical solution technique is based on the incompressible Navier-Stokes equations. In the method a pseudospectral technique is based on the incompressible Navier-Stokes equations. In the method a pseudospectral technique is used in the latitudinal direction, and a second-order accurate finite difference scheme discretizes time and radial derivatives. This paper discusses the development and performance of this numerical scheme for the AGCE which has been modelled in the past only by pure FD formulations. In addition, previous models have not investigated the effect of using a dielectric force to simulate terrestrial gravity. The effect of this dielectric force on the flow field is investigated as well as a parameter study of varying rotation rates and boundary temperatures. Among the effects noted are the production of larger velocities and enhanced reversals of radial temperature gradients for a body force generated by the electric field.

  14. Magnetic Fluctuation-Driven Intrinsic Flow in a Toroidal Plasma

    NASA Astrophysics Data System (ADS)

    Brower, D. L.; Ding, W. X.; Lin, L.; Almagri, A. F.; den Hartog, D. J.; Sarff, J. S.

    2012-10-01

    Magnetic fluctuations have been long observed in various magnetic confinement configurations. These perturbations may arise naturally from plasma instabilities such as tearing modes and energetic particle driven modes, but they can also be externally imposed by error fields or external magnetic coils. It is commonly observed that large MHD modes lead to plasma locking (no rotation) due to torque produced by eddy currents on the wall, and it is predicted that stochastic field induces flow damping where the radial electric field is reduced. Flow generation is of great importance to fusion plasma research, especially low-torque devices like ITER, as it can act to improve performance. Here we describe new measurements in the MST reversed field pinch (RFP) showing that the coherent interaction of magnetic and particle density fluctuations can produce a turbulent fluctuation-induced kinetic force, which acts to drive intrinsic plasma rotation. Key observations include; (1) the average kinetic force resulting from density fluctuations, ˜ 0.5 N/m^3, is comparable to the intrinsic flow acceleration, and (2) between sawtooth crashes, the spatial distribution of the kinetic force is directed to create a sheared parallel flow profile that is consistent with the measured flow profile in direction and amplitude, suggesting the kinetic force is responsible for intrinsic plasma rotation.

  15. Evaluation of the Use of Second Generation Wavelets in the Coherent Vortex Simulation Approach

    NASA Technical Reports Server (NTRS)

    Goldstein, D. E.; Vasilyev, O. V.; Wray, A. A.; Rogallo, R. S.

    2000-01-01

    The objective of this study is to investigate the use of the second generation bi-orthogonal wavelet transform for the field decomposition in the Coherent Vortex Simulation of turbulent flows. The performances of the bi-orthogonal second generation wavelet transform and the orthogonal wavelet transform using Daubechies wavelets with the same number of vanishing moments are compared in a priori tests using a spectral direct numerical simulation (DNS) database of isotropic turbulence fields: 256(exp 3) and 512(exp 3) DNS of forced homogeneous turbulence (Re(sub lambda) = 168) and 256(exp 3) and 512(exp 3) DNS of decaying homogeneous turbulence (Re(sub lambda) = 55). It is found that bi-orthogonal second generation wavelets can be used for coherent vortex extraction. The results of a priori tests indicate that second generation wavelets have better compression and the residual field is closer to Gaussian. However, it was found that the use of second generation wavelets results in an integral length scale for the incoherent part that is larger than that derived from orthogonal wavelets. A way of dealing with this difficulty is suggested.

  16. Vacuum arc plasma thrusters with inductive energy storage driver

    NASA Technical Reports Server (NTRS)

    Krishnan, Mahadevan (Inventor)

    2009-01-01

    A plasma thruster with a cylindrical inner and cylindrical outer electrode generates plasma particles from the application of energy stored in an inductor to a surface suitable for the formation of a plasma and expansion of plasma particles. The plasma production results in the generation of charged particles suitable for generating a reaction force, and the charged particles are guided by a magnetic field produced by the same inductor used to store the energy used to form the plasma.

  17. Advanced Magnetic Materials Methods and Numerical Models for Fluidization in Microgravity and Hypogravity

    NASA Technical Reports Server (NTRS)

    Atwater, James; Wheeler, Richard, Jr.; Akse, James; Jovanovic, Goran; Reed, Brian

    2013-01-01

    To support long-duration manned missions in space such as a permanent lunar base, Mars transit, or Mars Surface Mission, improved methods for the treatment of solid wastes, particularly methods that recover valuable resources, are needed. The ability to operate under microgravity and hypogravity conditions is essential to meet this objective. The utilization of magnetic forces to manipulate granular magnetic media has provided the means to treat solid wastes under variable gravity conditions by filtration using a consolidated magnetic media bed followed by thermal processing of the solid wastes in a fluidized bed reactor. Non-uniform magnetic fields will produce a magnetic field gradient in a bed of magnetically susceptible media toward the distributor plate of a fluidized bed reactor. A correctly oriented magnetic field gradient will generate a downward direct force on magnetic media that can substitute for gravitational force in microgravity, or which may augment low levels of gravity, such as on the Moon or Mars. This approach is termed Gradient Magnetically Assisted Fluidization (G-MAFB), in which the magnitude of the force on the fluidized media depends upon the intensity of the magnetic field (H), the intensity of the field gradient (dH/dz), and the magnetic susceptibility of the media. Fluidized beds based on the G-MAFB process can operate in any gravitational environment by tuning the magnetic field appropriately. Magnetic materials and methods have been developed that enable G-MAFB operation under variable gravity conditions.

  18. Force-Mediating Magnetic Nanoparticles to Engineer Neuronal Cell Function

    PubMed Central

    Gahl, Trevor J.; Kunze, Anja

    2018-01-01

    Cellular processes like membrane deformation, cell migration, and transport of organelles are sensitive to mechanical forces. Technically, these cellular processes can be manipulated through operating forces at a spatial precision in the range of nanometers up to a few micrometers through chaperoning force-mediating nanoparticles in electrical, magnetic, or optical field gradients. But which force-mediating tool is more suitable to manipulate cell migration, and which, to manipulate cell signaling? We review here the differences in forces sensation to control and engineer cellular processes inside and outside the cell, with a special focus on neuronal cells. In addition, we discuss technical details and limitations of different force-mediating approaches and highlight recent advancements of nanomagnetics in cell organization, communication, signaling, and intracellular trafficking. Finally, we give suggestions about how force-mediating nanoparticles can be used to our advantage in next-generation neurotherapeutic devices. PMID:29867315

  19. Force-Mediating Magnetic Nanoparticles to Engineer Neuronal Cell Function.

    PubMed

    Gahl, Trevor J; Kunze, Anja

    2018-01-01

    Cellular processes like membrane deformation, cell migration, and transport of organelles are sensitive to mechanical forces. Technically, these cellular processes can be manipulated through operating forces at a spatial precision in the range of nanometers up to a few micrometers through chaperoning force-mediating nanoparticles in electrical, magnetic, or optical field gradients. But which force-mediating tool is more suitable to manipulate cell migration, and which, to manipulate cell signaling? We review here the differences in forces sensation to control and engineer cellular processes inside and outside the cell, with a special focus on neuronal cells. In addition, we discuss technical details and limitations of different force-mediating approaches and highlight recent advancements of nanomagnetics in cell organization, communication, signaling, and intracellular trafficking. Finally, we give suggestions about how force-mediating nanoparticles can be used to our advantage in next-generation neurotherapeutic devices.

  20. Vibration damping of elastic waves in electrically conducting media subjected to high magnetic fields

    NASA Technical Reports Server (NTRS)

    Horwath, T. G.

    1992-01-01

    The propagation of vibrational energy in bulk, torsional, and flexural modes, in electrically conducting media can undergo strong attenuation if subjected to high magnetic fields in certain spatial arrangements. The reasons for this are induced Eddy currents which are generated by the volume elements in the media moving transversally to the magnetic field at acoustic velocities. In magnetic fields achievable with superconductors, the non-conservative (dissipative) forces are compared to the elastic and inertial forces for most metals. Strong dissipation of vibrational energy in the form of heat takes place as a result. A simplified theory is presented based on engineering representations of electrodynamics, attenuation values for representative metals are calculated, and problems encountered in formulating a generalized theory based on electrodynamics of moving media are discussed. General applications as well as applications specific to maglev are discussed.

  1. A silicon-nanowire memory driven by optical gradient force induced bistability

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dong, B.; Institute of Microelectronics, A*STAR; Cai, H., E-mail: caih@ime.a-star.edu.sg

    2015-12-28

    In this paper, a bistable optical-driven silicon-nanowire memory is demonstrated, which employs ring resonator to generate optical gradient force over a doubly clamped silicon-nanowire. Two stable deformation positions of a doubly clamped silicon-nanowire represent two memory states (“0” and “1”) and can be set/reset by modulating the light intensity (<3 mW) based on the optical force induced bistability. The time response of the optical-driven memory is less than 250 ns. It has applications in the fields of all optical communication, quantum computing, and optomechanical circuits.

  2. Inverse tissue mechanics of cell monolayer expansion.

    PubMed

    Kondo, Yohei; Aoki, Kazuhiro; Ishii, Shin

    2018-03-01

    Living tissues undergo deformation during morphogenesis. In this process, cells generate mechanical forces that drive the coordinated cell motion and shape changes. Recent advances in experimental and theoretical techniques have enabled in situ measurement of the mechanical forces, but the characterization of mechanical properties that determine how these forces quantitatively affect tissue deformation remains challenging, and this represents a major obstacle for the complete understanding of morphogenesis. Here, we proposed a non-invasive reverse-engineering approach for the estimation of the mechanical properties, by combining tissue mechanics modeling and statistical machine learning. Our strategy is to model the tissue as a continuum mechanical system and to use passive observations of spontaneous tissue deformation and force fields to statistically estimate the model parameters. This method was applied to the analysis of the collective migration of Madin-Darby canine kidney cells, and the tissue flow and force were simultaneously observed by the phase contrast imaging and traction force microscopy. We found that our monolayer elastic model, whose elastic moduli were reverse-engineered, enabled a long-term forecast of the traction force fields when given the tissue flow fields, indicating that the elasticity contributes to the evolution of the tissue stress. Furthermore, we investigated the tissues in which myosin was inhibited by blebbistatin treatment, and observed a several-fold reduction in the elastic moduli. The obtained results validate our framework, which paves the way to the estimation of mechanical properties of living tissues during morphogenesis.

  3. Continuous micro-feeding of fine cohesive powders actuated by pulse inertia force and acoustic radiation force in ultrasonic standing wave field.

    PubMed

    Wang, Hongcheng; Wu, Liqun; Zhang, Ting; Chen, Rangrang; Zhang, Linan

    2018-07-10

    Stable continuous micro-feeding of fine cohesive powders has recently gained importance in many fields. However, it remains a great challenge in practice because of the powder aggregate caused by interparticle cohesive forces in small capillaries. This paper describes a novel method of feeding fine cohesive powder actuated by a pulse inertia force and acoustic radiation force simultaneously in an ultrasonic standing wave field using a tapered glass nozzle. Nozzles with different outlet diameters are fabricated using glass via a heating process. A pulse inertia force is excited to drive powder movement to the outlet section of the nozzle in a consolidated columnar rod mode. An acoustic radiation force is generated to suspend the particles and make the rod break into large quantities of small agglomerates which impact each other randomly. So the aggregation phenomenon in the fluidization of cohesive powders can be eliminated. The suspended powder is discharged continuously from the nozzle orifice owing to the self-gravities and collisions between the inner particles. The micro-feeding rates can be controlled accurately and the minimum values for RespitoseSV003 and Granulac230 are 0.4 mg/s and 0.5 mg/s respectively. The relative standard deviations of all data points are below 0.12, which is considerably smaller than those of existing vibration feeders with small capillaries. Copyright © 2018 Elsevier B.V. All rights reserved.

  4. Japan's research on particle clouds and sprays

    NASA Technical Reports Server (NTRS)

    Sato, Jun'ichi

    1995-01-01

    Most of energy used by us is generated by combustion of liquid and solid fuels. These fuels are burned in combustors mainly as liquid sprays and pulverized solids, respectively. A knowledge of the combustion processes in combustors is needed to achieve proper designs that have stable operation, high efficiency, and low emission levels. However, current understanding of liquid and solid particle cloud combustion is far from complete. If combustion experiments for these fuels are performed under a normal gravity field, some experimental difficulties are encountered. These difficulties encountered include, that since the particles fall by the force of gravity it is impossible to stop the particles in the air, the falling speeds of particles are different from each other, and are depend on the particle size, the flame is lifted up and deformed by the buoyancy force, and natural convection makes the flow field more complex. Since these experimental difficulties are attributable to the gravity force, a microgravity field can eliminate the above problems. This means that the flame propagation experiments in static homogeneous liquid and solid particle clouds can be carried out under a microgravity field. This will provide much information for the basic questions related to combustion processes of particle clouds and sprays. In Japan, flame propagation processes in the combustible liquid and solid particle clouds have been studied experimentally by using a microgravity field generated by a 4.5 s dropshaft, a 10 s dropshaft, and by parabolic flight. Described in this presentation are the recent results of flame propagations studies in a homogeneous liquid particle cloud, in a mixture of liquid particles/gas fuel/air, in a PMMA particle cloud, and in a pulverized coal particle cloud.

  5. An Experimental Investigation of Forced Mixing of a Turbulent Boundary Layer in an Annular Diffuser. Ph.D. Thesis - Ohio State Univ.; [for boundary layer control

    NASA Technical Reports Server (NTRS)

    Shaw, R. J.

    1979-01-01

    The forced mixing process of a turbulent boundary layer in an axisymmetric annular diffuser using conventional wing-like vortex generators was studied. Flow field measurements were made at four axial locations downstream of the vortex generators. At each axial location, a total of 25 equally spaced profiles were measured behind three consecutive vortex generators which formed two pairs of vortex generators. Hot film anemometry probes measured the boundary layer turbulence structure at the same locations where pressure measurements were made. Both single and cross film probes were used. The diffuser turbulence data was teken only for a nominal inlet Mach number of 0.3. Three vortex generator configurations were tested. The differences between configurations involved changes in size and relative vortex generator positions. All three vortex generator configurations tested provided increases in diffuser performance. Distinct differences in the boundary layer integral properties and skin friction levels were noted between configurations. The axial turbulence intensity and Reynolds stress profiles measured displayed similarities in trends but differences in levels for the three configurations.

  6. Analytical model for force prediction when machining metal matrix composites

    NASA Astrophysics Data System (ADS)

    Sikder, Snahungshu

    Metal Matrix Composites (MMC) offer several thermo-mechanical advantages over standard materials and alloys which make them better candidates in different applications. Their light weight, high stiffness, and strength have attracted several industries such as automotive, aerospace, and defence for their wide range of products. However, the wide spread application of Meal Matrix Composites is still a challenge for industry. The hard and abrasive nature of the reinforcement particles is responsible for rapid tool wear and high machining costs. Fracture and debonding of the abrasive reinforcement particles are the considerable damage modes that directly influence the tool performance. It is very important to find highly effective way to machine MMCs. So, it is important to predict forces when machining Metal Matrix Composites because this will help to choose perfect tools for machining and ultimately save both money and time. This research presents an analytical force model for predicting the forces generated during machining of Metal Matrix Composites. In estimating the generated forces, several aspects of cutting mechanics were considered including: shearing force, ploughing force, and particle fracture force. Chip formation force was obtained by classical orthogonal metal cutting mechanics and the Johnson-Cook Equation. The ploughing force was formulated while the fracture force was calculated from the slip line field theory and the Griffith theory of failure. The predicted results were compared with previously measured data. The results showed very good agreement between the theoretically predicted and experimentally measured cutting forces.

  7. Reconciling Structural and Thermodynamic Predictions Using All-Atom and Coarse-Grain Force Fields: The Case of Charged Oligo-Arginine Translocation into DMPC Bilayers

    PubMed Central

    2015-01-01

    Using the translocation of short, charged cationic oligo-arginine peptides (mono-, di-, and triarginine) from bulk aqueous solution into model DMPC bilayers, we explore the question of the similarity of thermodynamic and structural predictions obtained from molecular dynamics simulations using all-atom and Martini coarse-grain force fields. Specifically, we estimate potentials of mean force associated with translocation using standard all-atom (CHARMM36 lipid) and polarizable and nonpolarizable Martini force fields, as well as a series of modified Martini-based parameter sets. We find that we are able to reproduce qualitative features of potentials of mean force of single amino acid side chain analogues into model bilayers. In particular, modifications of peptide–water and peptide–membrane interactions allow prediction of free energy minima at the bilayer–water interface as obtained with all-atom force fields. In the case of oligo-arginine peptides, the modified parameter sets predict interfacial free energy minima as well as free energy barriers in almost quantitative agreement with all-atom force field based simulations. Interfacial free energy minima predicted by a modified coarse-grained parameter set are −2.51, −4.28, and −5.42 for mono-, di-, and triarginine; corresponding values from all-atom simulations are −0.83, −3.33, and −3.29, respectively, all in units of kcal/mol. We found that a stronger interaction between oligo-arginine and the membrane components and a weaker interaction between oligo-arginine and water are crucial for producing such minima in PMFs using the polarizable CG model. The difference between bulk aqueous and bilayer center states predicted by the modified coarse-grain force field are 11.71, 14.14, and 16.53 kcal/mol, and those by the all-atom model are 6.94, 8.64, and 12.80 kcal/mol; those are of almost the same order of magnitude. Our simulations also demonstrate a remarkable similarity in the structural aspects of the ensemble of configurations generated using the all-atom and coarse-grain force fields. Both resolutions show that oligo-arginine peptides adopt preferential orientations as they translocate into the bilayer. The guiding theme centers on charged groups maintaining coordination with polar and charged bilayer components as well as local water. We also observe similar behaviors related with membrane deformations. PMID:25290376

  8. Reconciling structural and thermodynamic predictions using all-atom and coarse-grain force fields: the case of charged oligo-arginine translocation into DMPC bilayers.

    PubMed

    Hu, Yuan; Sinha, Sudipta Kumar; Patel, Sandeep

    2014-10-16

    Using the translocation of short, charged cationic oligo-arginine peptides (mono-, di-, and triarginine) from bulk aqueous solution into model DMPC bilayers, we explore the question of the similarity of thermodynamic and structural predictions obtained from molecular dynamics simulations using all-atom and Martini coarse-grain force fields. Specifically, we estimate potentials of mean force associated with translocation using standard all-atom (CHARMM36 lipid) and polarizable and nonpolarizable Martini force fields, as well as a series of modified Martini-based parameter sets. We find that we are able to reproduce qualitative features of potentials of mean force of single amino acid side chain analogues into model bilayers. In particular, modifications of peptide-water and peptide-membrane interactions allow prediction of free energy minima at the bilayer-water interface as obtained with all-atom force fields. In the case of oligo-arginine peptides, the modified parameter sets predict interfacial free energy minima as well as free energy barriers in almost quantitative agreement with all-atom force field based simulations. Interfacial free energy minima predicted by a modified coarse-grained parameter set are -2.51, -4.28, and -5.42 for mono-, di-, and triarginine; corresponding values from all-atom simulations are -0.83, -3.33, and -3.29, respectively, all in units of kcal/mol. We found that a stronger interaction between oligo-arginine and the membrane components and a weaker interaction between oligo-arginine and water are crucial for producing such minima in PMFs using the polarizable CG model. The difference between bulk aqueous and bilayer center states predicted by the modified coarse-grain force field are 11.71, 14.14, and 16.53 kcal/mol, and those by the all-atom model are 6.94, 8.64, and 12.80 kcal/mol; those are of almost the same order of magnitude. Our simulations also demonstrate a remarkable similarity in the structural aspects of the ensemble of configurations generated using the all-atom and coarse-grain force fields. Both resolutions show that oligo-arginine peptides adopt preferential orientations as they translocate into the bilayer. The guiding theme centers on charged groups maintaining coordination with polar and charged bilayer components as well as local water. We also observe similar behaviors related with membrane deformations.

  9. Plasma sweeper. [Patents

    DOEpatents

    Motley, R.W.; Glanz, J.

    1982-10-25

    A device is described for coupling RF power (a plasma sweeper) from RF power introducing means to a plasma having a magnetic field associated therewith comprises at least one electrode positioned near the plasma and near the RF power introducing means. Means are described for generating a static electric field at the electrode directed into the plasma and having a component substantially perpendicular to the plasma magnetic field such that a non-zero vector cross-product of the electric and magnetic fields exerts a force on the plasma causing the plasma to drift.

  10. Nanophotonic force microscopy: Characterizing particle–surface interactions using near-field photonics

    DOE PAGES

    Schein, Perry; Kang, Pilgyu; O’Dell, Dakota; ...

    2015-01-27

    Direct measurements of particle–surface interactions are important for characterizing the stability and behavior of colloidal and nanoparticle suspensions. Current techniques are limited in their ability to measure pico-Newton scale interaction forces on submicrometer particles due to signal detection limits and thermal noise. In this paper, we present a new technique for making measurements in this regime, which we refer to as nanophotonic force microscopy. Using a photonic crystal resonator, we generate a strongly localized region of exponentially decaying, near-field light that allows us to confine small particles close to a surface. From the statistical distribution of the light intensity scatteredmore » by the particle we are able to map out the potential well of the trap and directly quantify the repulsive force between the nanoparticle and the surface. Finally, as shown in this Letter, our technique is not limited by thermal noise, and therefore, we are able to resolve interaction forces smaller than 1 pN on dielectric particles as small as 100 nm in diameter.« less

  11. Laboratory evidence that line-tied tension forces can suppress loss-of-equilibrium flux rope eruptions in the solar corona

    NASA Astrophysics Data System (ADS)

    Myers, C. E.; Yamada, M.; Belova, E.; Ji, H.; Yoo, J.; Fox, W.; Jara-Almonte, J.; Gao, L.

    2014-10-01

    Loss-of-equilibrium mechanisms such as the ideal torus instability [Kliem & Török, Phys. Rev. Lett. 96, 255002 (2006)] are predicted to drive arched flux ropes in the solar corona to erupt. In recent line-tied flux rope experiments conducted in the Magnetic Reconnection Experiment (MRX), however, we find that quasi-statically driven flux ropes remain confined well beyond the predicted torus instability threshold. In order to understand this behavior, in situ measurements from a 300 channel 2D magnetic probe array are used to comprehensively analyze the force balance between the external (vacuum) and internal (plasma-generated) magnetic fields. We find that the line-tied tension force--a force that is not included in the basic torus instability theory--plays a major role in preventing eruptions. The dependence of this tension force on various vacuum field and flux rope parameters will be discussed. This research is supported by DoE Contract Number DE-AC02-09CH11466 and by the NSF/DoE Center for Magnetic Self-Organization (CMSO).

  12. Magnetic field amplification by the r-mode instability

    NASA Astrophysics Data System (ADS)

    Chugunov, A. I.; Friedman, J. L.; Lindblom, L.; Rezzolla, L.

    2017-12-01

    We discuss the magnetic field enhancement by unstable r-modes (driven by the gravitational radiation reaction force) in rotating stars. In the absence of a magnetic field, gravitational radiation exponentially increases the r-mode amplitude α, and accelerates differential rotation (secular motion of fluid elements). For a magnetized star, differential rotation enhances the magnetic field energy. Rezzolla et al (2000-2001) argued that if the magnetic energy grows faster than the gravitational radiation reaction force pumps energy into the r-modes, then the r-mode instability is suppressed. Chugunov (2015) demonstrated that without gravitational radiation, differential rotation can be treated as a degree of freedom decoupled from the r-modes and controlled by the back reaction of the magnetic field. In particular, the magnetic field windup does not damp r-modes. Here we discuss the effect of the back reaction of the magnetic field on differential rotation of unstable r-modes, and show that it limits the generated magnetic field and the magnetic energy growth rate preventing suppression of the r-mode instability by magnetic windup at low saturation amplitudes, α ≪ 1, predicted by current models.

  13. Terahertz generation via laser coupling to anharmonic carbon nanotube array

    NASA Astrophysics Data System (ADS)

    Sharma, Soni; Vijay, A.

    2018-02-01

    A scheme of terahertz radiation generation employing a matrix of anharmonic carbon nanotubes (CNTs) embedded in silica is proposed. The matrix is irradiated by two collinear laser beams that induce large excursions on CNT electrons and exert a nonlinear force at the beat frequency ω = ω1-ω2. The force derives a nonlinear current producing THz radiation. The THz field is resonantly enhanced at the plasmon resource, ω = ω p ( 1 + β ) / √{ 2 } , where ωp is the plasma frequency and β is a characteristic parameter. Collisions are a limiting factor, suppressing the plasmon resonance. For typical values of plasma parameters, we obtain power conversion efficiency of the order of 10-6.

  14. Developing a Novel Eye Tracking Paradigm to Assess Mild Traumatic Brain Injury: A Feasibility Study of the Bethesda Eye and Attention Measure (BEAM)

    DTIC Science & Technology

    2012-10-01

    system, which includes the retina, lateral geniculate nucleus, striate cortex, superior colliculus, parietal cortex, frontal eye fields... body penetrating the brain, forces generated from events such as a blast or explosion, or other forces yet to be defined. Consistent with the...and loss of productivity (47-57%; Tanielian & Jaycox, 2008). With advances in modern medicine and neuroimaging, more Service Members and civilians

  15. A Nonlinear Elasticity Model of Macromolecular Conformational Change Induced by Electrostatic Forces

    PubMed Central

    Zhou, Y. C.; Holst, Michael; McCammon, J. Andrew

    2008-01-01

    In this paper we propose a nonlinear elasticity model of macromolecular conformational change (deformation) induced by electrostatic forces generated by an implicit solvation model. The Poisson-Boltzmann equation for the electrostatic potential is analyzed in a domain varying with the elastic deformation of molecules, and a new continuous model of the electrostatic forces is developed to ensure solvability of the nonlinear elasticity equations. We derive the estimates of electrostatic forces corresponding to four types of perturbations to an electrostatic potential field, and establish the existance of an equilibrium configuration using a fixed-point argument, under the assumption that the change in the ionic strength and charges due to the additional molecules causing the deformation are sufficiently small. The results are valid for elastic models with arbitrarily complex dielectric interfaces and cavities, and can be generalized to large elastic deformation caused by high ionic strength, large charges, and strong external fields by using continuation methods. PMID:19461946

  16. Rotational effect of buoyancy in frontcrawl: Does it really cause the legs to sink?

    PubMed

    Yanai, T

    2001-02-01

    The purposes of this study were to quantify the rotational effect of buoyant force (buoyant torque) during the performance of front crawl and to reexamine the mechanics of horizontal alignment of the swimmers. Three-dimensional videography was used to measure the position and orientation of the body segments of 11 competitive swimmers performing front crawl stroke at a sub-maximum sprinting speed. The dimensions of each body segment were defined mathematically to match the body segment parameters (mass, density, and centroid position) reported in the literature. The buoyant force and torque were computed for every video-field (60fields/s), assuming that the water surface followed a sine curve along the length of the swimmer. The average buoyant torque over the stroke cycle (mean=22Nm) was directed to raise the legs and lower the head, primarily because the recovery arm and a part of the head were lifted out of the water and the center of buoyancy shifted toward the feet. This finding contradicts the prevailing speculation that buoyancy only causes the legs to sink throughout the stroke cycle. On the basis of a theoretical analysis of the results, it is postulated that the buoyant torque, and perhaps the forces generated by kicks, function to counteract the torque generated by the hydrodynamic forces acting on the hands, so as to maintain the horizontal alignment of the body in front crawl.

  17. Cannon Air Force base New Mexico, Installation of Digital Airport Surveillance Radar, Final Environmental Assessment

    DTIC Science & Technology

    2005-07-06

    C95.1-1991, American National Standard Safety Levels With Respect to Human Exposure to Radiofrequency Electromagnetic Fields , 300 kHz to 100 GHz. New...Site 4) were evaluated for possible siting of the ASR- 11. All three sites are situated in undeveloped fields on base. Site 2 is located between the...alternative ASR-1 1 sites. 3.12 ELECTROMAGNETIC ENERGY 3.12.1 Existing Conditions Electrical currents and components generate electrical fields and

  18. Characteristic of Secondary Flow Caused by Local Density Change in Standing Acoustic Fields

    NASA Astrophysics Data System (ADS)

    Tonsho, Kazuyuki; Hirosawa, Takuya; Kusakawa, Hiroshi; Kuwahara, Takuo; Tanabe, Mitsuaki

    Secondary flow is a flow which is caused by the interference between standing acoustic fields and local density change. The behavior of the secondary flow depends on the location of the given local density change in the standing acoustic fields. When the density change is given at the middle of a velocity node and the neighboring velocity anti-node (middle point) or when it is given at the velocity anti-node in standing acoustic fields, the secondary flow shows particular behavior. Characteristic of the secondary flow at the two positions was predicted by numerical simulations. It was examined from these simulations whether the driving mechanism of the flow can be explained by the kind of acoustic radiation force that has been proposed so far. The predicted secondary flow was verified by experiments. For both the simulations and experiments, the standing acoustic fields generated in a cylinder are employed. In the experiments, the acoustic fields are generated by two loud speakers that are vibrated in same phase in a chamber. The employed resonance frequency is about 1000 Hz. The chamber is filled with air of room temperature and atmospheric pressure. In the numerical simulations and experiments, the local density change is given by heating or cooling. Because the secondary flow is influenced by buoyancy, the numerical simulations were done without taking gravity force into account and a part of the experiments were done by the microgravity condition using a drop tower. As a result of the simulations, at the middle point, the heated air was blown toward the node and the cooled air was blown toward the anti-node. It is clarified that the secondary flow is driven by the expected kind of acoustic radiation force. At the anti-node, both the heated and cooled air expands perpendicular to the traveling direction of the sound wave. The driving mechanism of the secondary flow can not be explained by the acoustic radiation force, and a detailed analysis is done. Through the comparison between experimental and numerical results, it was verified that the secondary flow is qualitatively predictable by the numerical simulations.

  19. Gravity Fields Generation In The Universe By The Large Range of Scales Convection Systems In Planets, Stars, Black Holes and Galaxies Based On The "Convection Bang Hypothesis"

    NASA Astrophysics Data System (ADS)

    Gholibeigian, H.; Amirshahkarami, A.; Gholibeigian, K.

    2015-12-01

    In our vision it is believed that the Big Bang was Convection Bang (CB). When CB occurred, a gigantic large-scale forced convection system (LFCS) began to create space-time including gravitons and gluons in more than light speed. Then, simultaneously by a swirling wild wind, created inflation process including many quantum convection loops (QCL) in locations which had more density of temperature and energetic particles like gravitons. QCL including fundamental particles, grew and formed black holes (BHs) as the core of galaxies. LFCSs of heat and mass in planets, stars, BHs and galaxies generate gravity and electromagnetic fields and change the properties of matter and space-time around the systems. Mechanism: Samples: 1- Due to gravity fields of Sun and Moon, Earth's inner core is dislocated toward them and rotates around the Earth's center per day and generates LFCSs, Gholibeigian [AGU, 2012]. 2- Dislocated Sun's core due to gravity fields of planets/ Jupiter, rotates around the Sun's center per 25-35 days and generates LFCSs, Gholibeigian [EGU, 2014]. 3- If a planet/star falls into a BH, what happens? It means, its dislocated core rotates around its center in less than light speed and generates very fast LFCS and friction, while it is rotating/melting around/inward the center of BH. Observable Factors: 1- There is not logical relation between surface gravity fields of planets/Sun and their masses (general relativity); see Planetary Fact Sheet/Ratio to Earth Values-NASA: Earth: mass/gravity =1/1, Jupiter=317.8/2.36, Neptune=17.1/1.12, Saturn=95.2/0.916, Moon=0.0128/0.166, Sun=333000/28. 2- Convective systems in thunderstorms help bring ozone down to Earth [Brian-Kahn]. 3- In 12 surveyed BHs, produced gravity force & magnetic field strength were matched (unique LFCS source) [PhysOrg - June 4, 2014]. Justification: After BB/CB, gravitons were created without any other masses and curvature of space-time (general relativity), but by primary gigantic convection process.

  20. Electron energy recovery system for negative ion sources

    DOEpatents

    Dagenhart, William K.; Stirling, William L.

    1982-01-01

    An electron energy recovery system for negative ion sources is provided. The system, employs crossed electric and magnetic fields to separate the electrons from ions as they are extracted from a negative ion source plasma generator and before the ions are accelerated to their full kinetic energy. With the electric and magnetic fields oriented 90.degree. to each other, the electrons are separated from the plasma and remain at approximately the electrical potential of the generator in which they were generated. The electrons migrate from the ion beam path in a precessing motion out of the ion accelerating field region into an electron recovery region provided by a specially designed electron collector electrode. The electron collector electrode is uniformly spaced from a surface of the ion generator which is transverse to the direction of migration of the electrons and the two surfaces are contoured in a matching relationship which departs from a planar configuration to provide an electric field component in the recovery region which is parallel to the magnetic field thereby forcing the electrons to be directed into and collected by the electron collector electrode. The collector electrode is maintained at a potential slightly positive with respect to the ion generator so that the electrons are collected at a small fraction of the full accelerating supply voltage energy.

  1. Calculating forces on thin flat plates with incomplete vorticity-field data

    NASA Astrophysics Data System (ADS)

    Limacher, Eric; Morton, Chris; Wood, David

    2016-11-01

    Optical experimental techniques such as particle image velocimetry (PIV) permit detailed quantification of velocities in the wakes of bluff bodies. Patterns in the wake development are significant to force generation, but it is not trivial to quantitatively relate changes in the wake to changes in measured forces. Key difficulties in this regard include: (i) accurate quantification of velocities close to the body, and (ii) the effect of missing velocity or vorticity data in regions where optical access is obscured. In the present work, we consider force formulations based on the vorticity field, wherein mathematical manipulation eliminates the need for accurate near-body velocity information. Attention is restricted to nominally two dimensional problems, namely (i) a linearly accelerating flat plate, investigated using PIV in a water tunnel, and (ii) a pitching plate in a freestream flow, as investigated numerically by Wang & Eldredge (2013). The effect of missing vorticity data on the pressure side of the plate has a significant impact on the calculation of force for the pitching plate test case. Fortunately, if the vorticity on the pressure side remains confined to a thin boundary layer, simple corrections can be applied to recover a force estimate.

  2. Protein folding: complex potential for the driving force in a two-dimensional space of collective variables.

    PubMed

    Chekmarev, Sergei F

    2013-10-14

    Using the Helmholtz decomposition of the vector field of folding fluxes in a two-dimensional space of collective variables, a potential of the driving force for protein folding is introduced. The potential has two components. One component is responsible for the source and sink of the folding flows, which represent respectively, the unfolded states and the native state of the protein, and the other, which accounts for the flow vorticity inherently generated at the periphery of the flow field, is responsible for the canalization of the flow between the source and sink. The theoretical consideration is illustrated by calculations for a model β-hairpin protein.

  3. Impingement effect of service module reaction control system engine plumes. Results of service module reaction control system plume model force field application to an inflight Skylab mission proximity operation situation with the inflight Skylab response

    NASA Technical Reports Server (NTRS)

    Lobb, J. D., Jr.

    1978-01-01

    Plume impingement effects of the service module reaction control system thruster firings were studied to determine if previous flight experience would support the current plume impingement model for the orbiter reaction control system engines. The orbiter reaction control system is used for rotational and translational maneuvers such as those required during rendezvous, braking, docking, and station keeping. Therefore, an understanding of the characteristics and effects of the plume force fields generated by the reaction control system thruster firings were examined to develop the procedures for orbiter/payload proximity operations.

  4. Multiscale Analysis of Rapidly Rotating Dynamo Simulations

    NASA Astrophysics Data System (ADS)

    Orvedahl, Ryan; Calkins, Michael; Featherstone, Nicholas

    2017-11-01

    The magnetic field of the planets and stars are generated by dynamo action in their electrically conducting fluid interiors. Numerical models of this process solve the fundamental equations of magnetohydrodynamics driven by convection in a rotating spherical shell. Rotation plays an important role in modifying the resulting convective flows and the self-generated magnetic field. We present results of simulating rapidly rotating systems that are unstable to dynamo action. We use the pseudo-spectral code Rayleigh to generate a suite of direct numerical simulations. Each simulation uses the Boussinesq approximation and is characterized by an Ekman number (Ek = ν / ΩL2) of 10-5. We vary the degree of convective forcing to obtain a range of convective Rossby numbers. The resulting flows and magnetic structures are analyzed using a Reynolds decomposition. We determine the relative importance of each term in the scale-separated governing equations and estimate the relevant spatial scales responsible for generating the mean magnetic field.

  5. Automated CFD Database Generation for a 2nd Generation Glide-Back-Booster

    NASA Technical Reports Server (NTRS)

    Chaderjian, Neal M.; Rogers, Stuart E.; Aftosmis, Michael J.; Pandya, Shishir A.; Ahmad, Jasim U.; Tejmil, Edward

    2003-01-01

    A new software tool, AeroDB, is used to compute thousands of Euler and Navier-Stokes solutions for a 2nd generation glide-back booster in one week. The solution process exploits a common job-submission grid environment using 13 computers located at 4 different geographical sites. Process automation and web-based access to the database greatly reduces the user workload, removing much of the tedium and tendency for user input errors. The database consists of forces, moments, and solution files obtained by varying the Mach number, angle of attack, and sideslip angle. The forces and moments compare well with experimental data. Stability derivatives are also computed using a monotone cubic spline procedure. Flow visualization and three-dimensional surface plots are used to interpret and characterize the nature of computed flow fields.

  6. Acquisition and deconvolution of seismic signals by different methods to perform direct ground-force measurements

    NASA Astrophysics Data System (ADS)

    Poletto, Flavio; Schleifer, Andrea; Zgauc, Franco; Meneghini, Fabio; Petronio, Lorenzo

    2016-12-01

    We present the results of a novel borehole-seismic experiment in which we used different types of onshore-transient-impulsive and non-impulsive-surface sources together with direct ground-force recordings. The ground-force signals were obtained by baseplate load cells located beneath the sources, and by buried soil-stress sensors installed in the very shallow-subsurface together with accelerometers. The aim was to characterize the source's emission by its complex impedance, function of the near-field vibrations and soil stress components, and above all to obtain appropriate deconvolution operators to remove the signature of the sources in the far-field seismic signals. The data analysis shows the differences in the reference measurements utilized to deconvolve the source signature. As downgoing waves, we process the signals of vertical seismic profiles (VSP) recorded in the far-field approximation by an array of permanent geophones cemented at shallow-medium depth outside the casing of an instrumented well. We obtain a significant improvement in the waveform of the radiated seismic-vibrator signals deconvolved by ground force, similar to that of the seismograms generated by the impulsive sources, and demonstrates that the results obtained by different sources present low values in their repeatability norm. The comparison evidences the potentiality of the direct ground-force measurement approach to effectively remove the far-field source signature in VSP onshore data, and to increase the performance of permanent acquisition installations for time-lapse application purposes.

  7. SUNQUAKE GENERATION BY CORONAL MAGNETIC RESTRUCTURING

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Russell, A. J. B.; Mooney, M. K.; Leake, J. E.

    2016-11-01

    Sunquakes are the surface signatures of acoustic waves in the Sun’s interior that are produced by some but not all flares and coronal mass ejections (CMEs). This paper explores a mechanism for sunquake generation by the changes in magnetic field that occur during flares and CMEs, using MHD simulations with a semiempirical FAL-C atmosphere to demonstrate the generation of acoustic waves in the interior in response to changing magnetic tilt in the corona. We find that Alfvén–sound resonance combined with the ponderomotive force produces acoustic waves in the interior with sufficient energy to match sunquake observations when the magnetic fieldmore » angle changes of the order of 10° in a region where the coronal field strength is a few hundred gauss or more. The most energetic sunquakes are produced when the coronal field is strong, while the variation of magnetic field strength with height and the timescale of the change in tilt are of secondary importance.« less

  8. Computational model for calculating the dynamical behaviour of generators caused by unbalanced magnetic pull and experimental validation

    NASA Astrophysics Data System (ADS)

    Pennacchi, Paolo

    2008-04-01

    The modelling of the unbalanced magnetic pull (UMP) in generators and the experimental validation of the proposed method are presented in this paper. The UMP is one of the most remarkable effects of electromechanical interactions in rotating machinery. As a consequence of the rotor eccentricity, the imbalance of the electromagnetic forces acting between rotor and stator generates a net radial force. This phenomenon can be avoided by means of a careful assembly and manufacture in small and stiff machines, like electrical motors. On the contrary, the eccentricity of the active part of the rotor with respect to the stator is unavoidable in big generators of power plants, because they operate above their first critical speed and are supported by oil-film bearings. In the first part of the paper, a method aimed to calculate the UMP force is described. This model is more general than those available in literature, which are limited to circular orbits. The model is based on the actual position of the rotor inside the stator, therefore on the actual air-gap distribution, regardless of the orbit type. The closed form of the nonlinear UMP force components is presented. In the second part, the experimental validation of the proposed model is presented. The dynamical behaviour in the time domain of a steam turbo-generator of a power plant is considered and it is shown that the model is able to reproduce the dynamical effects due to the excitation of the magnetic field in the generator.

  9. Electrostatic particle trap for ion beam sputter deposition

    DOEpatents

    Vernon, Stephen P.; Burkhart, Scott C.

    2002-01-01

    A method and apparatus for the interception and trapping of or reflection of charged particulate matter generated in ion beam sputter deposition. The apparatus involves an electrostatic particle trap which generates electrostatic fields in the vicinity of the substrate on which target material is being deposited. The electrostatic particle trap consists of an array of electrode surfaces, each maintained at an electrostatic potential, and with their surfaces parallel or perpendicular to the surface of the substrate. The method involves interception and trapping of or reflection of charged particles achieved by generating electrostatic fields in the vicinity of the substrate, and configuring the fields to force the charged particulate material away from the substrate. The electrostatic charged particle trap enables prevention of charged particles from being deposited on the substrate thereby enabling the deposition of extremely low defect density films, such as required for reflective masks of an extreme ultraviolet lithography (EUVL) system.

  10. Receptivity and Forced Response to Acoustic Disturbances in High-Speed Boundary Layers

    NASA Technical Reports Server (NTRS)

    Balakumar, P.; King, Rudolph A.; Chou, Amanda; Owens, Lewis R.; Kegerise, Michael A.

    2016-01-01

    Supersonic boundary-layer receptivity to freestream acoustic disturbances is investigated by solving the Navier-Stokes equations for Mach 3.5 flow over a sharp flat plate and a 7-deg half-angle cone. The freestream disturbances are generated from a wavy wall placed at the nozzle wall. The freestream acoustic disturbances radiated by the wavy wall are obtained by solving the linearized Euler equations. The results for the flat plate show that instability modes are generated at all the incident angles ranging from zero to highly oblique. However, the receptivity coefficient decreases by about 20 times when the incident angle increases from zero to a highly oblique angle of 68 degrees. The results for the cone show that no instability modes are generated when the acoustic disturbances impinge the cone obliquely. The results show that the perturbations generated inside the boundary layer by the acoustic disturbances are the response of the boundary layer to the external forcing. The amplitude of the forced disturbances inside the boundary layer are about 2.5 times larger than the incoming field for zero azimuthal wavenumber and they are about 1.5 times for large azimuthal wavenumbers.

  11. Detached Eddy Simulation Results for a Space Launch System Configuration at Liftoff Conditions and Comparison with Experiment

    NASA Technical Reports Server (NTRS)

    Krist, Steven E.; Ghaffari, Farhad

    2015-01-01

    Computational simulations for a Space Launch System configuration at liftoff conditions for incidence angles from 0 to 90 degrees were conducted in order to generate integrated force and moment data and longitudinal lineloads. While the integrated force and moment coefficients can be obtained from wind tunnel testing, computational analyses are indispensable in obtaining the extensive amount of surface information required to generate proper lineloads. However, beyond an incidence angle of about 15 degrees, the effects of massive flow separation on the leeward pressure field is not well captured with state of the art Reynolds Averaged Navier-Stokes methods, necessitating the employment of a Detached Eddy Simulation method. Results from these simulations are compared to the liftoff force and moment database and surface pressure data derived from a test in the NASA Langley 14- by 22-Foot Subsonic Wind Tunnel.

  12. Counteracting Gravitation In Dielectric Liquids

    NASA Technical Reports Server (NTRS)

    Israelsson, Ulf E.; Jackson, Henry W.; Strayer, Donald M.

    1993-01-01

    Force of gravity in variety of dielectric liquids counteracted by imposing suitably contoured electric fields. Technique makes possible to perform, on Earth, variety of experiments previously performed only in outer space and at great cost. Also used similarly in outer space to generate sort of artificial gravitation.

  13. Performance Improvement of Diagonal Type MHD Generator by Modification of PTO Electrode Configuration

    NASA Astrophysics Data System (ADS)

    Takahashi, Toru; Fujino, Takayasu; Ishikawa, Motoo

    Time dependent three-dimensional numerical analysis is carried out in order to clarify causes of voltage loss occurring near power takeoff regions and to suggest how to reduce the voltage loss for the scramjet engine driven MHD generator which was developed under the hypersonic vehicle electric power system program in USA. The numerical results under the experimental condition show that the local positive electric field is induced near the power takeoff electrodes. The phenomenon is due to the electric field loss by the high electric current through the weakly ionized plasma with low temperature and also by the low electromotive force near the power takeoff electrodes. When the configuration of power takeoff electrodes is modified, the current density near the power takeoff electrodes becomes small and the electromotive force becomes strong. The electric power output under the optimum electrode configuration of power takeoff is improved by 22 percent, compared with the value under the experimental condition.

  14. Numerical analysis of tangential slot blowing on a generic chined forebody

    NASA Technical Reports Server (NTRS)

    Agosta, Roxana M.

    1994-01-01

    A numerical study is performed to investigate the effects of tangential slot blowing on a generic chined forebody. The Reynolds-averaged, thin-layer, Navier-Stokes equations are solved to obtain the high-angle-of-attack viscous flow field about a generic chined forebody. Tangential slot blowing is investigated as a means of forebody flow control to generate side force and yawing moment on the forebody. The effects of jet mass flow ratios, angle of attack, and blowing slot location in the axial and circumferential directions are studied. The computed results are compared with available wind tunnel experimental data. The solutions with and without blowing are also analyzed using helicity density contours, surface flow patterns, and off-surface instantaneous streamlines. The results of this analysis provide details of the flow field about the generic chined forebody, as well as show that tangential slot blowing can be used as a means of forebody flow control to generate side force and yawing moment.

  15. Generation of field-aligned current (FAC) and convection through the formation of pressure regimes: Correction for the concept of Dungey's convection

    NASA Astrophysics Data System (ADS)

    Tanaka, T.; Watanabe, M.; Den, M.; Fujita, S.; Ebihara, Y.; Kikuchi, T.; Hashimoto, K. K.; Kataoka, R.

    2016-09-01

    In this paper, we try to elucidate the generation mechanism of the field-aligned current (FAC) and coexisting convection. From the comparison between the theoretical prediction and the state of numerical solution from the high-resolution global simulation, we obtain the following conclusions about the distribution of dynamo, the magnetic field structure along the flow path that diverges Poynting flux, and energy conversion promoting the generation of electromagnetic energy. The dynamo for the region 1 FAC, which is in the high-latitude-side cusp-mantle region, has a structure in which magnetic field is compressed along the convection path by the slow mode motion. The dynamo for the region 2 FAC is in the ring current region at the inner edge of the plasma sheet, and has a structure in which magnetic field is curved outward along the convection path. Under these structures, electromagnetic energy is generated from the work done by pressure gradient force, in both dynamos for the region 1 and region 2 FACs. In these generation processes of the FACs, the excitation of convection and the formation of pressure regimes occur as interdependent processes. This structure leads to a modification in the way of understanding the Dungey's convection. Generation of the FAC through the formation of pressure regimes is essential even for the case of substorm onset.

  16. Drain Current Modulation of a Single Drain MOSFET by Lorentz Force for Magnetic Sensing Application.

    PubMed

    Chatterjee, Prasenjit; Chow, Hwang-Cherng; Feng, Wu-Shiung

    2016-08-30

    This paper reports a detailed analysis of the drain current modulation of a single-drain normal-gate n channel metal-oxide semiconductor field effect transistor (n-MOSFET) under an on-chip magnetic field. A single-drain n-MOSFET has been fabricated and placed in the center of a square-shaped metal loop which generates the on-chip magnetic field. The proposed device designed is much smaller in size with respect to the metal loop, which ensures that the generated magnetic field is approximately uniform. The change of drain current and change of bulk current per micron device width has been measured. The result shows that the difference drain current is about 145 µA for the maximum applied magnetic field. Such changes occur from the applied Lorentz force to push out the carriers from the channel. Based on the drain current difference, the change in effective mobility has been detected up to 4.227%. Furthermore, a detailed investigation reveals that the device behavior is quite different in subthreshold and saturation region. A change of 50.24 µA bulk current has also been measured. Finally, the device has been verified for use as a magnetic sensor with sensitivity 4.084% (29.6 T(-1)), which is very effective as compared to other previously reported works for a single device.

  17. Terahertz radiation generation by beating of two laser beams in a collisional plasma with oblique magnetic field

    NASA Astrophysics Data System (ADS)

    Hematizadeh, Ayoob; Jazayeri, Seyed Masud; Ghafary, Bijan

    2018-02-01

    A scheme for excitation of terahertz (THz) radiation is presented by photo mixing of two super-Gaussian laser beams in a rippled density collisional magnetized plasma. Lasers having different frequencies and wave numbers but the same electric fields create a ponderomotive force on the electrons of plasma in the beating frequency. Super-Gaussian laser beam has the exclusive features such as steep gradient in laser intensity distribution, wider cross-section in comparison with Gaussian profiles, which make stronger ponderomotive force and higher THz radiation. The magnetic field is considered oblique to laser beams propagation direction; in this case, depending on the phase matching conditions different mode waves can propagate in plasma. It is found that amplitude and efficiency of the emitted THz radiation not only are sensitive to the beating frequency, collision frequency, and magnetic field strength but to the angle between laser beams and static magnetic field. The efficiency of THz radiation can be optimized in a certain angle.

  18. Sensitivity of modeled estuarine circulation to spatial and temporal resolution of input meteorological forcing of a cold frontal passage

    NASA Astrophysics Data System (ADS)

    Weaver, Robert J.; Taeb, Peyman; Lazarus, Steven; Splitt, Michael; Holman, Bryan P.; Colvin, Jeffrey

    2016-12-01

    In this study, a four member ensemble of meteorological forcing is generated using the Weather Research and Forecasting (WRF) model in order to simulate a frontal passage event that impacted the Indian River Lagoon (IRL) during March 2015. The WRF model is run to provide high and low, spatial (0.005° and 0.1°) and temporal (30 min and 6 h) input wind and pressure fields. The four member ensemble is used to force the Advanced Circulation model (ADCIRC) coupled with Simulating Waves Nearshore (SWAN) and compute the hydrodynamic and wave response. Results indicate that increasing the spatial resolution of the meteorological forcing has a greater impact on the results than increasing the temporal resolution in coastal systems like the IRL where the length scales are smaller than the resolution of the operational meteorological model being used to generate the forecast. Changes in predicted water elevations are due in part to the upwind and downwind behavior of the input wind forcing. The significant wave height is more sensitive to the meteorological forcing, exhibited by greater ensemble spread throughout the simulation. It is important that the land mask, seen by the meteorological model, is representative of the geography of the coastal estuary as resolved by the hydrodynamic model. As long as the temporal resolution of the wind field captures the bulk characteristics of the frontal passage, computational resources should be focused so as to ensure that the meteorological model resolves the spatial complexities, such as the land-water interface, that drive the land use responsible for dynamic downscaling of the winds.

  19. New generation of docking programs: Supercomputer validation of force fields and quantum-chemical methods for docking.

    PubMed

    Sulimov, Alexey V; Kutov, Danil C; Katkova, Ekaterina V; Ilin, Ivan S; Sulimov, Vladimir B

    2017-11-01

    Discovery of new inhibitors of the protein associated with a given disease is the initial and most important stage of the whole process of the rational development of new pharmaceutical substances. New inhibitors block the active site of the target protein and the disease is cured. Computer-aided molecular modeling can considerably increase effectiveness of new inhibitors development. Reliable predictions of the target protein inhibition by a small molecule, ligand, is defined by the accuracy of docking programs. Such programs position a ligand in the target protein and estimate the protein-ligand binding energy. Positioning accuracy of modern docking programs is satisfactory. However, the accuracy of binding energy calculations is too low to predict good inhibitors. For effective application of docking programs to new inhibitors development the accuracy of binding energy calculations should be higher than 1kcal/mol. Reasons of limited accuracy of modern docking programs are discussed. One of the most important aspects limiting this accuracy is imperfection of protein-ligand energy calculations. Results of supercomputer validation of several force fields and quantum-chemical methods for docking are presented. The validation was performed by quasi-docking as follows. First, the low energy minima spectra of 16 protein-ligand complexes were found by exhaustive minima search in the MMFF94 force field. Second, energies of the lowest 8192 minima are recalculated with CHARMM force field and PM6-D3H4X and PM7 quantum-chemical methods for each complex. The analysis of minima energies reveals the docking positioning accuracies of the PM7 and PM6-D3H4X quantum-chemical methods and the CHARMM force field are close to one another and they are better than the positioning accuracy of the MMFF94 force field. Copyright © 2017 Elsevier Inc. All rights reserved.

  20. Generation of rising-tone chorus in a two-dimensional mirror field by using the general curvilinear PIC code

    NASA Astrophysics Data System (ADS)

    Ke, Yangguang; Gao, Xinliang; Lu, Quanming; Wang, Xueyi; Wang, Shui

    2017-08-01

    Recently, the generation of rising-tone chorus has been implemented with one-dimensional (1-D) particle-in-cell (PIC) simulations in an inhomogeneous background magnetic field, where both the propagation of waves and motion of electrons are simply forced to be parallel to the background magnetic field. In this paper, we have developed a two-dimensional (2-D) general curvilinear PIC simulation code and successfully reproduced rising-tone chorus waves excited from an anisotropic electron distribution in a 2-D mirror field. Our simulation results show that whistler waves are mainly generated around the magnetic equator and continuously gain growth during their propagation toward higher-latitude regions. The rising-tone chorus waves are observed off the magnetic equator, which propagate quasi-parallel to the background magnetic field with the wave normal angle smaller than 25°. Due to the propagating effect, the wave normal angle of chorus waves is increasing during their propagation toward higher-latitude regions along an enough curved field line. The chirping rate of chorus waves is found to be larger along a field line with a smaller curvature.

  1. Investigation on magnetoacoustic signal generation with magnetic induction and its application to electrical conductivity reconstruction.

    PubMed

    Ma, Qingyu; He, Bin

    2007-08-21

    A theoretical study on the magnetoacoustic signal generation with magnetic induction and its applications to electrical conductivity reconstruction is conducted. An object with a concentric cylindrical geometry is located in a static magnetic field and a pulsed magnetic field. Driven by Lorentz force generated by the static magnetic field, the magnetically induced eddy current produces acoustic vibration and the propagated sound wave is received by a transducer around the object to reconstruct the corresponding electrical conductivity distribution of the object. A theory on the magnetoacoustic waveform generation for a circular symmetric model is provided as a forward problem. The explicit formulae and quantitative algorithm for the electrical conductivity reconstruction are then presented as an inverse problem. Computer simulations were conducted to test the proposed theory and assess the performance of the inverse algorithms for a multi-layer cylindrical model. The present simulation results confirm the validity of the proposed theory and suggest the feasibility of reconstructing electrical conductivity distribution based on the proposed theory on the magnetoacoustic signal generation with magnetic induction.

  2. Design of a Nb3Sn Magnet for a 4th Generation ECR Ion Source

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Prestemon, S,; Trillaud, F.; Caspi, S.

    2008-08-17

    The next generation of Electron Cyclotron Resonant (ECR) ion sources are expected to operate at a heating radio frequency greater than 40 GHz. The existing 3rd generation systems, exemplified by the state of the art system VENUS, operate in the 10-28 GHz range, and use NbTi superconductors for the confinement coils. The magnetic field needed to confine the plasma scales with the rf frequency, resulting in peak fields on the magnets of the 4th generation system in excess of 10 T. High field superconductors such as Nb{sub 3}Sn must therefore be considered. The magnetic design of a 4th. generation ECRmore » ion source operating at an rf frequency of 56 GHz is considered. The analysis considers both internal and external sextupole configurations, assuming commercially available Nb{sub 3}Sn material properties. Preliminary structural design issues are discussed based on the forces and margins associated with the coils in the different configurations, leading to quantitative data for the determination of a final magnet design.« less

  3. A model-based exploration of the role of pattern generating circuits during locomotor adaptation.

    PubMed

    Marjaninejad, Ali; Finley, James M

    2016-08-01

    In this study, we used a model-based approach to explore the potential contributions of central pattern generating circuits (CPGs) during adaptation to external perturbations during locomotion. We constructed a neuromechanical modeled of locomotion using a reduced-phase CPG controller and an inverted pendulum mechanical model. Two different forms of locomotor adaptation were examined in this study: split-belt treadmill adaptation and adaptation to a unilateral, elastic force field. For each simulation, we first examined the effects of phase resetting and varying the model's initial conditions on the resulting adaptation. After evaluating the effect of phase resetting on the adaptation of step length symmetry, we examined the extent to which the results from these simple models could explain previous experimental observations. We found that adaptation of step length symmetry during split-belt treadmill walking could be reproduced using our model, but this model failed to replicate patterns of adaptation observed in response to force field perturbations. Given that spinal animal models can adapt to both of these types of perturbations, our findings suggest that there may be distinct features of pattern generating circuits that mediate each form of adaptation.

  4. A computational study on the influence of insect wing geometry on bee flight mechanics

    PubMed Central

    Feaster, Jeffrey; Bayandor, Javid

    2017-01-01

    ABSTRACT Two-dimensional computational fluid dynamics (CFD) is applied to better understand the effects of wing cross-sectional morphology on flow field and force production. This study investigates the influence of wing cross-section on insect scale flapping flight performance, for the first time, using a morphologically representative model of a bee (Bombus pensylvanicus) wing. The bee wing cross-section was determined using a micro-computed tomography scanner. The results of the bee wing are compared with flat and elliptical cross-sections, representative of those used in modern literature, to determine the impact of profile variation on aerodynamic performance. The flow field surrounding each cross-section and the resulting forces are resolved using CFD for a flight speed range of 1 to 5 m/s. A significant variation in vortex formation is found when comparing the ellipse and flat plate with the true bee wing. During the upstroke, the bee and approximate wing cross-sections have a much shorter wake structure than the flat plate or ellipse. During the downstroke, the flat plate and elliptical cross-sections generate a single leading edge vortex, while the approximate and bee wings generate numerous, smaller structures that are shed throughout the stroke. Comparing the instantaneous aerodynamic forces on the wing, the ellipse and flat plate sections deviate progressively with velocity from the true bee wing. Based on the present findings, a simplified cross-section of an insect wing can misrepresent the flow field and force production. We present the first aerodynamic study using a true insect wing cross-section and show that the wing corrugation increases the leading edge vortex formation frequency for a given set of kinematics. PMID:29061734

  5. A computational study on the influence of insect wing geometry on bee flight mechanics.

    PubMed

    Feaster, Jeffrey; Battaglia, Francine; Bayandor, Javid

    2017-12-15

    Two-dimensional computational fluid dynamics (CFD) is applied to better understand the effects of wing cross-sectional morphology on flow field and force production. This study investigates the influence of wing cross-section on insect scale flapping flight performance, for the first time, using a morphologically representative model of a bee ( Bombus pensylvanicus ) wing. The bee wing cross-section was determined using a micro-computed tomography scanner. The results of the bee wing are compared with flat and elliptical cross-sections, representative of those used in modern literature, to determine the impact of profile variation on aerodynamic performance. The flow field surrounding each cross-section and the resulting forces are resolved using CFD for a flight speed range of 1 to 5 m/s. A significant variation in vortex formation is found when comparing the ellipse and flat plate with the true bee wing. During the upstroke, the bee and approximate wing cross-sections have a much shorter wake structure than the flat plate or ellipse. During the downstroke, the flat plate and elliptical cross-sections generate a single leading edge vortex, while the approximate and bee wings generate numerous, smaller structures that are shed throughout the stroke. Comparing the instantaneous aerodynamic forces on the wing, the ellipse and flat plate sections deviate progressively with velocity from the true bee wing. Based on the present findings, a simplified cross-section of an insect wing can misrepresent the flow field and force production. We present the first aerodynamic study using a true insect wing cross-section and show that the wing corrugation increases the leading edge vortex formation frequency for a given set of kinematics. © 2017. Published by The Company of Biologists Ltd.

  6. Primordial black holes from fifth forces

    NASA Astrophysics Data System (ADS)

    Amendola, Luca; Rubio, Javier; Wetterich, Christof

    2018-04-01

    Primordial black holes can be produced by a long-range attractive fifth force stronger than gravity, mediated by a light scalar field interacting with nonrelativistic "heavy" particles. As soon as the energy fraction of heavy particles reaches a threshold, the fluctuations rapidly become nonlinear. The overdensities collapse into black holes or similar screened objects, without the need for any particular feature in the spectrum of primordial density fluctuations generated during inflation. We discuss whether such primordial black holes can constitute the total dark matter component in the Universe.

  7. Shear stress cleaning for surface departiculation

    NASA Technical Reports Server (NTRS)

    Musselman, R. P.; Yarbrough, T. W.

    1986-01-01

    A cleaning technique widely used by the nuclear utility industry for removal of radioactive surface contamination has proven effective at removing non-hazardous contaminant particles as small as 0.1 micrometer. The process employs a controlled high velocity liquid spray inside a vapor containment enclosure to remove particles from a surface. The viscous drag force generated by the cleaning fluid applies a shear stress greater than the adhesion force that holds small particles to a substrate. Fluid mechanics and field tests indicate general cleaning parameters.

  8. Development of magnet configurations for magnetic immunostaining

    NASA Astrophysics Data System (ADS)

    Kaneko, Miki; Chikaki, Shinichi; Matsuda, Sachiko; Kuwahata, Akihiro; Namita, Masayuki; Saito, Itsuro; Sakamoto, Satoshi; Kusakabe, Moriaki; Sekino, Masaki

    2018-05-01

    Magnetic immunostaining using a magnet and antibody-labeled fluorescent ferrite (FF) beads is established as a rapid immunostaining. In this study, we proposed the novel configuration of magnets with the large magnetic field gradient and the strong magnetic force for magnetic immunostaining. To confirm the usefulness of the proposed magnet configuration, we performed numerical analysis of the magnetic characteristics of the proposed magnets, and the magnetic immunostaining with FF beads. It was revealed that the proposed magnets generated the strong magnetic force and promoted the immunoreaction rapidly.

  9. Nonlinear generation of sum and difference frequency waves by two helicon waves in a semiconductor

    NASA Astrophysics Data System (ADS)

    Salimullah, M.; Ferdous, T.

    1984-05-01

    This paper presents a theoretical investigation of the nonlinear generation of electrostatic waves at the sum and the difference frequency when two high amplitude elliptically polarized helicon waves propagate along the direction of the externally applied static magnetic field in an n-type semiconductor. The nonlinearity arises through the ponderomotive force on electrons. It is noticed that the power conversion efficiency of the difference frequency generation is much larger than that of the sum frequency generation. The power conversion efficiency may be easily increased by increasing the density of electrons in the semiconductor.

  10. Dynamic ultraslow optical-matter wave analog of an event horizon.

    PubMed

    Zhu, C J; Deng, L; Hagley, E W; Ge, Mo-Lin

    2014-08-29

    We investigate theoretically the effects of a dynamically increasing medium index on optical-wave propagation in a rubidium condensate. A long pulsed pump laser coupling a D2 line transition produces a rapidly growing internally generated field. This results in a significant optical self-focusing effect and creates a dynamically growing medium index anomaly that propagates ultraslowly with the internally generated field. When a fast probe pulse injected after a delay catches up with the dynamically increasing index anomaly, it is forced to slow down and is prohibited from crossing the anomaly, thereby realizing an ultraslow optical-matter wave analog of a dynamic white-hole event horizon.

  11. Acoustic concentration of particles in fluid flow

    DOEpatents

    Ward, Michael D.; Kaduchak, Gregory

    2010-11-23

    An apparatus for acoustic concentration of particles in a fluid flow includes a substantially acoustically transparent membrane and a vibration generator that define a fluid flow path therebetween. The fluid flow path is in fluid communication with a fluid source and a fluid outlet and the vibration generator is disposed adjacent the fluid flow path and is capable of producing an acoustic field in the fluid flow path. The acoustic field produces at least one pressure minima in the fluid flow path at a predetermined location within the fluid flow path and forces predetermined particles in the fluid flow path to the at least one pressure minima.

  12. On-demand trajectory control of continuously generated airborne microdroplets

    NASA Astrophysics Data System (ADS)

    Ishiwata, Tomoki; Sakai, Keiji

    2011-05-01

    A technique to control the trajectory of in-flight microdroplets is described. The localized electric field generated by a needle electrode applies the dielectrophoretic force to the droplet to deflect its trajectory. Deflection by as much as 0.2 rad can be achieved, sufficient for industrial use. Moreover, highly selective control among droplets in a stream was demonstrated with the electric field modulations of 10 μs, which corresponds to the sorting speed of 105 s-1. In contrast to the conventional electrostatic control, the proposed technique is effective also for insulating liquids, allowing it to be applied to a wider range of materials.

  13. Human movement training with a cable driven ARm EXoskeleton (CAREX).

    PubMed

    Mao, Ying; Jin, Xin; Gera Dutta, Geetanjali; Scholz, John P; Agrawal, Sunil K

    2015-01-01

    In recent years, the authors have proposed lightweight exoskeleton designs for upper arm rehabilitation using multi-stage cable-driven parallel mechanism. Previously, the authors have demonstrated via experiments that it is possible to apply "assist-as-needed" forces in all directions at the end-effector with such an exoskeleton acting on an anthropomorphic machine arm. A human-exoskeleton interface was also presented to show the feasibility of CAREX on human subjects. The goals of this paper are to 1) further address issues when CAREX is mounted on human subjects, e.g., generation of continuous cable tension trajectories 2) demonstrate the feasibility and effectiveness of CAREX on movement training of healthy human subjects and a stroke patient. In this research, CAREX is rigidly attached to an arm orthosis worn by human subjects. The cable routing points are optimized to achieve a relatively large "tensioned" static workspace. A new cable tension planner based on quadratic programming is used to generate continuous cable tension trajectory for smooth motion. Experiments were carried out on eight healthy subjects. The experimental results show that CAREX can help the subjects move closer to a prescribed circular path using the force fields generated by the exoskeleton. The subjects also adapt to the path shortly after training. CAREX was also evaluated on a stroke patient to test the feasibility of its use on patients with neural impairment. The results show that the patient was able to move closer to a prescribed straight line path with the "assist-as-needed" force field.

  14. Analysis of the electrolyte convection inside the concentration boundary layer during structured electrodeposition of copper in high magnetic gradient fields.

    PubMed

    König, Jörg; Tschulik, Kristina; Büttner, Lars; Uhlemann, Margitta; Czarske, Jürgen

    2013-03-19

    To experimentally reveal the correlation between electrodeposited structure and electrolyte convection induced inside the concentration boundary layer, a highly inhomogeneous magnetic field, generated by a magnetized Fe-wire, has been applied to an electrochemical system. The influence of Lorentz and magnetic field gradient force to the local transport phenomena of copper ions has been studied using a novel two-component laser Doppler velocity profile sensor. With this sensor, the electrolyte convection within 500 μm of a horizontally aligned cathode is presented. The electrode-normal two-component velocity profiles below the electrodeposited structure show that electrolyte convection is induced and directed toward the rim of the Fe-wire. The measured deposited structure directly correlates to the observed boundary layer flow. As the local concentration of Cu(2+) ions is enhanced due to the induced convection, maximum deposit thicknesses can be found at the rim of the Fe-wire. Furthermore, a complex boundary layer flow structure was determined, indicating that electrolyte convection of second order is induced. Moreover, the Lorentz force-driven convection rapidly vanishes, while the electrolyte convection induced by the magnetic field gradient force is preserved much longer. The progress for research is the first direct experimental proof of the electrolyte convection inside the concentration boundary layer that correlates to the deposited structure and reveals that the magnetic field gradient force is responsible for the observed structuring effect.

  15. Magnetically actuated tissue engineered scaffold: insights into mechanism of physical stimulation

    NASA Astrophysics Data System (ADS)

    Sapir-Lekhovitser, Yulia; Rotenberg, Menahem Y.; Jopp, Juergen; Friedman, Gary; Polyak, Boris; Cohen, Smadar

    2016-02-01

    Providing the right stimulatory conditions resulting in efficient tissue promoting microenvironment in vitro and in vivo is one of the ultimate goals in tissue development for regenerative medicine. It has been shown that in addition to molecular signals (e.g. growth factors) physical cues are also required for generation of functional cell constructs. These cues are particularly relevant to engineering of biological tissues, within which mechanical stress activates mechano-sensitive receptors, initiating biochemical pathways which lead to the production of functionally mature tissue. Uniform magnetic fields coupled with magnetizable nanoparticles embedded within three dimensional (3D) scaffold structures remotely create transient physical forces that can be transferrable to cells present in close proximity to the nanoparticles. This study investigated the hypothesis that magnetically responsive alginate scaffold can undergo reversible shape deformation due to alignment of scaffold's walls in a uniform magnetic field. Using custom made Helmholtz coil setup adapted to an Atomic Force Microscope we monitored changes in matrix dimensions in situ as a function of applied magnetic field, concentration of magnetic particles within the scaffold wall structure and rigidity of the matrix. Our results show that magnetically responsive scaffolds exposed to an externally applied time-varying uniform magnetic field undergo a reversible shape deformation. This indicates on possibility of generating bending/stretching forces that may exert a mechanical effect on cells due to alternating pattern of scaffold wall alignment and relaxation. We suggest that the matrix structure deformation is produced by immobilized magnetic nanoparticles within the matrix walls resulting in a collective alignment of scaffold walls upon magnetization. The estimated mechanical force that can be imparted on cells grown on the scaffold wall at experimental conditions is in the order of 1 pN, which correlates well with reported threshold to induce mechanotransduction effects on cellular level. This work is our next step in understanding of how to accurately create proper stimulatory microenvironment for promotion of cellular organization to form mature tissue engineered constructs.

  16. Magnetically actuated tissue engineered scaffold: insights into mechanism of physical stimulation

    PubMed Central

    Sapir-Lekhovitser, Yulia; Rotenberg, Menahem Y.; Jopp, Juergen; Friedman, Gary; Polyak, Boris; Cohen, Smadar

    2016-01-01

    Providing the right stimulatory conditions resulting in efficient tissue promoting microenvironment in vitro and in vivo is one of the ultimate goals in tissue development for regenerative medicine. It has been shown that in addition to molecular signals (e.g. growth factors) physical cues are also required for generation of functional cell constructs. These cues are particularly relevant to engineering of biological tissues, within which mechanical stress activates mechano-sensitive receptors, initiating biochemical pathways which lead to the production of functionally mature tissue. Uniform magnetic fields coupled with magnetizable nanoparticles embedded within three dimensional (3D) scaffold structures remotely create transient physical forces that can be transferrable to cells present in close proximity to the nanoparticles. This study investigated the hypothesis that magnetically responsive alginate scaffold can undergo reversible shape deformation due to alignment of scaffold’s walls in a uniform magnetic field. Using custom made Helmholtz coil setup adapted to an Atomic Force Microscope we monitored changes in matrix dimensions in situ as a function of applied magnetic field, concentration of magnetic particles within the scaffold wall structure and rigidity of the matrix. Our results show that magnetically responsive scaffolds exposed to an externally applied time-varying uniform magnetic field undergo a reversible shape deformation. This indicates on possibility of generating bending/stretching forces that may exert a mechanical effect on cells due to alternating pattern of scaffold wall alignment and relaxation. We suggest that the matrix structure deformation is produced by immobilized magnetic nanoparticles within the matrix walls resulting in a collective alignment of scaffold walls upon magnetization. The estimated mechanical force that can be imparted on cells grown on the scaffold wall at experimental conditions is in the order of 1 pN, which correlates well with reported threshold to induce mechanotransduction effects on cellular level. This work is our next step in understanding of how to accurately create proper stimulatory microenvironment for promotion of cellular organization to form mature tissue engineered constructs. PMID:26790538

  17. A numerical study of natural convection in a vertical annulus filled with gallium in the presence of magnetic field

    NASA Astrophysics Data System (ADS)

    Afrand, Masoud; Toghraie, Davood; Karimipour, Arash; Wongwises, Somchai

    2017-05-01

    Presets work aims to investigate the natural convection inside a cylindrical annulus mold containing molten gallium under a horizontal magnetic field in three-dimensional coordinates. The modeling system is a vertical cylindrical annulus which is made by two co-axial cylinders of internal and external radii. The internal and external walls are maintained isothermal but in different temperatures. The upper and lower sides of annulus are also considered adiabatic while it is filled by an electrical conducting fluid. Three dimensional cylindrical coordinates as (r , θ , z) are used to respond the velocity components as (u , v , w) . The governing equations are steady, laminar and Newtonian using the Boussinesq approximation. Equations are nonlinear and they must be corresponded by applying the finite volume approach; so that the hybrid-scheme is applied to discretize equations. The results imply that magnetic field existence leads to generate the Lorentz force in opposite direction of the buoyancy forces. Moreover the Lorentz force and its corresponded electric field are more significant in both Hartmann layer and Roberts layer, respectively. The strong magnetic field is required to achieve better quality products in the casting process of a liquid metal with a higher Prandtl number.

  18. Large gradient high magnetic field affects the association of MACF1 with actin and microtubule cytoskeleton.

    PubMed

    Qian, Ai-Rong; Hu, Li-Fang; Gao, Xiang; Zhang, Wei; Di, Sheng-Meng; Tian, Zong-Cheng; Yang, Peng-Fei; Yin, Da-Chuan; Weng, Yuan-Yuan; Shang, Peng

    2009-10-01

    The intense inhomogeneous magnetic fields acting on the diamagnetic materials naturally present in cells can generate strong magnetic forces. We have developed a superconducting magnet platform with large gradient high magnetic field (LG-HMF), which can produce three magnetic force fields of -1360, 0, and 1312 T(2)/m, and three corresponding apparent gravity levels, namely 0, 1, and 2-g for diamagnetic materials. In this study, the effects of different magnetic force fields on osteoblast-like cells (MG-63 and MC3T3-E1) viability, microtubule actin crosslinking factor 1 (MACF1) expression and its association with cytoskeleton were investigated. Results showed that cell viability increased to different degrees after exposure to 0 or 1-g conditions for 24 h, but it decreased by about 30% under 2-g conditions compared with control conditions. An increase in MACF1 expression at the RNA or protein level was observed in osteoblast-like cells under the magnetic force field of -1360 T(2)/m (0-g) relative to 1312 T(2)/m (2-g). Under control conditions, anti-MACF1 staining was scattered in the cytoplasm and partially colocalized with actin filaments (AFs) or microtubules (MTs) in the majority of osteoblast-like cells. Under 0-g conditions, MACF1 labeling was concentrated at perinuclear region and colocalization was not apparent. The patterns of anti-MACF1 labeling on MTs varied with MTs' changing under LG-HMF environment. In conclusion, LG-HMF affects osteoblast-like cell viability, MACF1 distribution, expression, and its association with cytoskeleton to some extent.

  19. Field induced anomalous spreading, oscillation, ejection, spinning, and breaking of oil droplets on a strongly slipping water surface.

    PubMed

    Kumar, Sunny; Sarma, Bhaskarjyoti; Dasmahapatra, Ahsok Kumar; Dalal, Amaresh; Basu, Dipankar Narayan; Bandyopadhyay, Dipankar

    2017-07-01

    Application of an electric field on an oil droplet floating on the surface of a deionized water bath showed interesting motions such as spreading, oscillation, and ejection. The electric field was generated by connecting a pointed platinum cathode at the top of the oil droplet and a copper anode coated with polymer at the bottom of the water layer. The experimental setup mimicked a conventional electrowetting setup with the exception that the oil was spread on a soft and deformable water isolator. While at relatively lower field intensities we observed spreading of the droplet, at intermediate field intensities the droplet oscillated around the platinum cathode, before ejecting out at a speed as high as ∼5 body lengths per second at even stronger field intensities. The experiments suggested that when the electric field was ramped up abruptly to a particular voltage, any of the spreading, oscillation, or ejection motions of the droplet could be engendered at lower, intermediate and higher field intensities, respectively. However, when the field was ramped up progressively by increasing by a definite amount of voltage per unit time, all three aforementioned motions could be generated simultaneously with the increase in the field intensity. Interestingly, when the aforementioned setup was placed on a magnet, the droplet showed a rotational motion under the influence of the Lorentz force, which was generated because of the coupling of the weak leakage current with the externally applied magnetic field. The spreading, oscillation, ejection, and rotation of the droplet were found to be functions of the oil-water interfacial tension, viscosity, and size of the oil droplet. We developed simple theoretical models to explain the experimental results obtained. Importantly, rotating at a higher speed broke the droplet into a number of smaller ones, owing to the combined influence of the spreading due to the centripetal force and the shear at the oil-water interface. While the oscillatory and rotational motions of the incompressible droplet could be employed as stirrers or impellers inside microfluidic devices for mixing applications, the droplet ejection could be employed for futuristic applications such as payload transport or drug delivery.

  20. AFHRL (Air Force Human Resources Laboratory) FY 86 Annual Report.

    DTIC Science & Technology

    1986-01-01

    support capabilities, related to the C-130 weapon system, the problem facing MAC is that exercises Another important role played by many and operational...field- generators of that era. OTE conducted of-view, high- resolution visual system an industry-wide competition to develop which can support air- to ...14 because high resolution and wide field copter Nap-of-the-Earth (NOE) missions. of-view are incompatible from a design To provide the considerable

  1. Quark mass variations of nuclear forces, BBN, and all that

    NASA Astrophysics Data System (ADS)

    Meissner, Ulf-G.

    2014-03-01

    In this talk, I discuss the modifications of the nuclear forces due to variations of the light quark masses and of the fine structure constant. This is based on the chiral nuclear effective field theory, that successfully describes a large body of data. The generation of the light elements in the Big Bang Nucleosynthesis provides important constraints on these modifications. In addition, I discuss the role of the anthropic principle in the triple-alpha process that underlies carbon and oxygen generation in hot stars. It appears that a fine-tuning of the quark masses and the fine structure constant within 2 to 3 per cent is required to make life on Earth viable. Supported in part by DFG, HGF and the BMBF.

  2. Acoustic streaming, fluid mixing, and particle transport by a Gaussian ultrasound beam in a cylindrical container

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Marshall, Jeffrey S., E-mail: jeffm@cems.uvm.edu; Wu, Junru

    A computational study is reported of the acoustic streaming flow field generated by a Gaussian ultrasound beam propagating normally toward the end wall of a cylindrical container. Particular focus is given to examining the effectiveness of the acoustic streaming flow for fluid mixing within the container, for deposition of particles in suspension onto the bottom surface, and for particle suspension from the bottom surface back into the flow field. The flow field is assumed to be axisymmetric with the ultrasound transducer oriented parallel to the cylinder axis and normal to the bottom surface of the container, which we refer tomore » as the impingement surface. Reflection of the sound from the impingement surface and sound absorption within the material at the container bottom are both accounted for in the computation. The computation also accounts for thermal buoyancy force due to ultrasonic heating of the impingement surface, but over the time period considered in the current simulations, the flow is found to be dominated by the acoustic streaming force, with only moderate effect of buoyancy force.« less

  3. Acoustic streaming, fluid mixing, and particle transport by a Gaussian ultrasound beam in a cylindrical container

    NASA Astrophysics Data System (ADS)

    Marshall, Jeffrey S.; Wu, Junru

    2015-10-01

    A computational study is reported of the acoustic streaming flow field generated by a Gaussian ultrasound beam propagating normally toward the end wall of a cylindrical container. Particular focus is given to examining the effectiveness of the acoustic streaming flow for fluid mixing within the container, for deposition of particles in suspension onto the bottom surface, and for particle suspension from the bottom surface back into the flow field. The flow field is assumed to be axisymmetric with the ultrasound transducer oriented parallel to the cylinder axis and normal to the bottom surface of the container, which we refer to as the impingement surface. Reflection of the sound from the impingement surface and sound absorption within the material at the container bottom are both accounted for in the computation. The computation also accounts for thermal buoyancy force due to ultrasonic heating of the impingement surface, but over the time period considered in the current simulations, the flow is found to be dominated by the acoustic streaming force, with only moderate effect of buoyancy force.

  4. Anti-gravity with present technology - Implementation and theoretical foundation

    NASA Astrophysics Data System (ADS)

    Alzofon, F. E.

    1981-07-01

    This paper proposes a semi-empirical model of the processes leading to the gravitational field based on accepted features of subatomic processes. Through an analogy with methods of cryogenics, a method of decreasing (or increasing) the gravitational force on a vehicle, using presently-known technology, is suggested. Various ways of ultilizing this effect in vehicle propulsion are described. A unified field theory is then detailed which provides a more formal foundation for the gravitational field model first introduced. In distinction to the general theory of relativity, it features physical processes which generate the gravitational field.

  5. Multiply charged ion generation according to magnetic field configurations in Hall thruster plasmas

    NASA Astrophysics Data System (ADS)

    Kim, Holak; Lee, Seunghun; Kim, Junbum; Lim, Youbong; Choe, Wonho; KIMS Collaboration

    2016-09-01

    Plasma propulsion is the most promising techniques to operate satellites for low earth orbit as well as deep space exploration. A typical plasma propulsion system is Hall thruster (HT) that uses crossed electromagnetic fields to ionize a propellant gas and to accelerate the ionized gas. In HT the tailoring of magnetic fields is significant due to that the electron confinement in the electromagnetic fields affects thruster performances such as thrust force, specific impulse, power efficiency, and life time. We designed an anode layer HT (TAL) with the magnetic field tailoring. The TAL is possible to keep discharge in 1 2 kilovolts, which voltage is useful to obtain high specific impulse The magnetic field tailoring is adapted to minimize undesirable heat dissipations and secondary electron emissions at a wall surrounding plasma In presentation, we will report TAL performances including thrust force, specific impulse, and anode efficiency measured by a pendulum thrust stand. This mechanical measurement will be compared to the plasma diagnostics conducted by angular Faraday probe, retarding potential analyzer, and ExB probe Grant No. 2014M1A3A3A02034510.

  6. Wind Generated Rogue Waves in an Annular Wave Flume.

    PubMed

    Toffoli, A; Proment, D; Salman, H; Monbaliu, J; Frascoli, F; Dafilis, M; Stramignoni, E; Forza, R; Manfrin, M; Onorato, M

    2017-04-07

    We investigate experimentally the statistical properties of a wind-generated wave field and the spontaneous formation of rogue waves in an annular flume. Unlike many experiments on rogue waves where waves are mechanically generated, here the wave field is forced naturally by wind as it is in the ocean. What is unique about the present experiment is that the annular geometry of the tank makes waves propagating circularly in an unlimited-fetch condition. Within this peculiar framework, we discuss the temporal evolution of the statistical properties of the surface elevation. We show that rogue waves and heavy-tail statistics may develop naturally during the growth of the waves just before the wave height reaches a stationary condition. Our results shed new light on the formation of rogue waves in a natural environment.

  7. Vector Potential Generation for Numerical Relativity Simulations

    NASA Astrophysics Data System (ADS)

    Silberman, Zachary; Faber, Joshua; Adams, Thomas; Etienne, Zachariah; Ruchlin, Ian

    2017-01-01

    Many different numerical codes are employed in studies of highly relativistic magnetized accretion flows around black holes. Based on the formalisms each uses, some codes evolve the magnetic field vector B, while others evolve the magnetic vector potential A, the two being related by the curl: B=curl(A). Here, we discuss how to generate vector potentials corresponding to specified magnetic fields on staggered grids, a surprisingly difficult task on finite cubic domains. The code we have developed solves this problem in two ways: a brute-force method, whose scaling is nearly linear in the number of grid cells, and a direct linear algebra approach. We discuss the success both algorithms have in generating smooth vector potential configurations and how both may be extended to more complicated cases involving multiple mesh-refinement levels. NSF ACI-1550436

  8. Bi-harmonic cantilever design for improved measurement sensitivity in tapping-mode atomic force microscopy.

    PubMed

    Loganathan, Muthukumaran; Bristow, Douglas A

    2014-04-01

    This paper presents a method and cantilever design for improving the mechanical measurement sensitivity in the atomic force microscopy (AFM) tapping mode. The method uses two harmonics in the drive signal to generate a bi-harmonic tapping trajectory. Mathematical analysis demonstrates that the wide-valley bi-harmonic tapping trajectory is as much as 70% more sensitive to changes in the sample topography than the standard single-harmonic trajectory typically used. Although standard AFM cantilevers can be driven in the bi-harmonic tapping trajectory, they require large forcing at the second harmonic. A design is presented for a bi-harmonic cantilever that has a second resonant mode at twice its first resonant mode, thereby capable of generating bi-harmonic trajectories with small forcing signals. Bi-harmonic cantilevers are fabricated by milling a small cantilever on the interior of a standard cantilever probe using a focused ion beam. Bi-harmonic drive signals are derived for standard cantilevers and bi-harmonic cantilevers. Experimental results demonstrate better than 30% improvement in measurement sensitivity using the bi-harmonic cantilever. Images obtained through bi-harmonic tapping exhibit improved sharpness and surface tracking, especially at high scan speeds and low force fields.

  9. Field sampling of loose erodible material: A new method to consider the full particle-size range

    NASA Astrophysics Data System (ADS)

    Klose, Martina; Gill, Thomas E.

    2017-04-01

    The aerodynamic entrainment of sand and dust is determined by the atmospheric forces exerted onto the soil surface and by the soil-surface condition. If aerodynamic forces are strong enough to generate sand and dust lifting, the entrained sediment amount still critically depends on the supply of loose particles readily available for lifting. This loose erodible material (LEM) is sometimes defined as the thin layer of loose particles on top of a crusted surface. Here, we more generally define LEM as loose particles or particle aggregates available for entrainment, which may or may not overlay a soil crust. Field sampling of LEM is difficult and only few attempts have been made. Motivated by saltation as the most efficient process to generate dust emission, methods have focused on capturing LEM in the sand-size range or on determining the potential of a soil surface to be eroded by aerodynamic forces and particle impacts. Here, our focus is to capture the full particle-size distribution of LEM in situ, including the dust and sand-size range, to investigate the potential and likelihood of dust emission mechanisms (aerodynamic entrainment, saltation bombardment, aggregate disintegration) to occur. A new vacuum method is introduced and its capability to sample LEM without significant alteration of the LEM particle-size distribution is investigated.

  10. Magnetic Eigenmodes in the Madison Dynamo Experiment

    NASA Astrophysics Data System (ADS)

    Nornberg, M. D.; Bayliss, R. A.; Forest, C. B.; Kendrick, R. D.; O'Connell, R.; Spence, E. J.

    2002-11-01

    A spherical dynamo experiment has been constructed at the University of Wisconsin's liquid sodium facility. The goals of the experiment are to observe and understand magnetic instabilities driven by flow shear in MHD systems, investigate MHD turbulence for magnetic Reynolds numbers of 100, and understand the role of fluid turbulence in current generation. Magnetic field generation is only possible for specific flow geometries. We have studied and achieved simple roll flow geometries in a full scale water experiment. Results from the water experiment have guided the design of the sodium experiment. The experiment consists of a 1 m diameter, spherical stainless steel vessel filled with liquid sodium at 110 Celsius. Two 100 Hp motors with impellers drive flows in the liquid sodium with flow velocities of 15 m/s. A gaussian grid of 66 Hall probes on the surface of the sodium vessel measure the generated external magnetic field. Hall probe feed-thru arrays measure the internal field. A pair of magnetic field coils produce a roughly uniform field inside the sphere with a centerline field strength of 100 gauss. Preliminary investigations include measurements of the turbulent electromotive force and excitation of magnetic eigenmodes.

  11. Design of shared instruments to utilize simulated gravities generated by a large-gradient, high-field superconducting magnet.

    PubMed

    Wang, Y; Yin, D C; Liu, Y M; Shi, J Z; Lu, H M; Shi, Z H; Qian, A R; Shang, P

    2011-03-01

    A high-field superconducting magnet can provide both high-magnetic fields and large-field gradients, which can be used as a special environment for research or practical applications in materials processing, life science studies, physical and chemical reactions, etc. To make full use of a superconducting magnet, shared instruments (the operating platform, sample holders, temperature controller, and observation system) must be prepared as prerequisites. This paper introduces the design of a set of sample holders and a temperature controller in detail with an emphasis on validating the performance of the force and temperature sensors in the high-magnetic field.

  12. Design of shared instruments to utilize simulated gravities generated by a large-gradient, high-field superconducting magnet

    NASA Astrophysics Data System (ADS)

    Wang, Y.; Yin, D. C.; Liu, Y. M.; Shi, J. Z.; Lu, H. M.; Shi, Z. H.; Qian, A. R.; Shang, P.

    2011-03-01

    A high-field superconducting magnet can provide both high-magnetic fields and large-field gradients, which can be used as a special environment for research or practical applications in materials processing, life science studies, physical and chemical reactions, etc. To make full use of a superconducting magnet, shared instruments (the operating platform, sample holders, temperature controller, and observation system) must be prepared as prerequisites. This paper introduces the design of a set of sample holders and a temperature controller in detail with an emphasis on validating the performance of the force and temperature sensors in the high-magnetic field.

  13. Thermal Control and Enhancement of Heat Transport Capacity of Two-Phase Loops With Electrohydrodynamic Conduction Pumping

    NASA Technical Reports Server (NTRS)

    Seyed-Yagoobi, J.; Didion, J.; Ochterbeck, J. M.; Allen, J.

    2000-01-01

    There are three kinds of electrohydrodynamics (EHD) pumping based on Coulomb force: induction pumping, ion-drag pumping, and pure conduction pumping. EHD induction pumping relies on the generation of induced charges. This charge induction in the presence of an electric field takes place due to a non-uniformity in the electrical conductivity of the fluid which can be caused by a non-uniform temperature distribution and/or an inhomogeneity of the fluid (e.g. a two-phase fluid). Therefore, induction pumping cannot be utilized in an isothermal homogeneous liquid. In order to generate Coulomb force, a space charge must be generated. There are two main mechanisms for generating a space charge in an isothermal liquid. The first one is associated with the ion injection at a metal/liquid interface and the related pumping is referred to as ion-drag pumping. Ion-drag pumping is not desirable because it can deteriorate the electrical properties of the working fluid. The second space charge generation mechanism is associated with the heterocharge layers of finite thickness in the vicinity of the electrodes. Heterocharge layers result from dissociation of the neutral electrolytic species and recombination of the generated ions. This type of pumping is referred to as pure conduction pumping. This project investigates the EHD pumping through pure conduction phenomenon. Very limited work has been conducted in this field and the majority of the published papers in this area have mistakenly assumed that the electrostriction force was responsible for the net flow generated in an isothermal liquid. The main motivation behind this study is to investigate an EHD conduction pump for a two-phase loop to be operated in the microgravity environment. The pump is installed in the liquid return passage (isothermal liquid) from the condenser section to the evaporator section. Unique high voltage and ground electrodes have been designed that generate sufficient pressure heads with very low electric power requirements making the EHD conduction pumping attractive to applications such as two-phase systems (e.g. capillary pumped loops and heat pipes). Currently, the EHD conduction pump performance is being tested on a two-phase loop under various operating conditions in the laboratory environment. The simple non-mechanical and lightweight design of the EHD pump combined with the rapid control of performance by varying the applied electric field, low power consumption, and reliability offer significant advantages over other pumping mechanisms; particularly in reduced gravity applications.

  14. Artificial blood-flow controlling effects of inhomogeneity of twisted magnetic fields

    NASA Astrophysics Data System (ADS)

    Nakagawa, Hidenori; Ohuchi, Mikio

    2017-06-01

    We developed a blood-flow controlling system using magnetic therapy for some types of nervous diseases. In our research, we utilized overlapped extremely low frequency (ELF) fields for the most effective blood-flow for the system. Results showed the possibility that the inhomogeneous region obtained by overlapping the fields at 50 Hz, namely, a desirably twisted field revealed a significant difference in induced electromotive forces at the insertion points of electrodes. In addition, ELF exposures with a high inhomogeneity of the twisted field at 50 Hz out of phase were more effective in generating an induced electromotive difference by approximately 31%, as contrasted with the difference generated by the exposure in phase. We expect that the increase of the inhomogeneity of the twisted field around a blood vessel can produce the most effective electromotive difference in the blood, and also moderately affect the excitable cells relating to the autonomic nervous system for an outstanding blood-flow control in vivo.

  15. Molybdenum disulfide and water interaction parameters

    NASA Astrophysics Data System (ADS)

    Heiranian, Mohammad; Wu, Yanbin; Aluru, Narayana R.

    2017-09-01

    Understanding the interaction between water and molybdenum disulfide (MoS2) is of crucial importance to investigate the physics of various applications involving MoS2 and water interfaces. An accurate force field is required to describe water and MoS2 interactions. In this work, water-MoS2 force field parameters are derived using the high-accuracy random phase approximation (RPA) method and validated by comparing to experiments. The parameters obtained from the RPA method result in water-MoS2 interface properties (solid-liquid work of adhesion) in good comparison to the experimental measurements. An accurate description of MoS2-water interaction will facilitate the study of MoS2 in applications such as DNA sequencing, sea water desalination, and power generation.

  16. A novel reciprocating micropump based on Lorentz force

    NASA Astrophysics Data System (ADS)

    Salari, Alinaghi; Hakimsima, Abbas; Shafii, Mohammad Behshad

    2015-03-01

    Lorentz force is the pumping basis of many electromagnetic micropumps used in lab-on-a-chip. In this paper a novel reciprocating single-chamber micropump is proposed, in which the actuation technique is based on Lorentz force acting on an array of microwires attached on a membrane surface. An alternating current is applied through the microwires in the presence of a magnetic field. The resultant force causes the membrane to oscillate and pushes the fluid to flow through microchannel using a ball-valve. The pump chamber (3 mm depth) was fabricated on a Polymethylmethacrylate (PMMA) substrate using laser engraving technique. The chamber was covered by a 60 μm thick hyper-elastic latex rubber diaphragm. Two miniature permanent magnets capable of providing magnetic field of 0.09 T at the center of the diaphragm were mounted on each side of the chamber. Square wave electric current with low-frequencies was generated using a function generator. Cylindrical copper microwires (250 μm diameter and 5 mm length) were attached side-by-side on top surface of the diaphragm. Thin loosely attached wires were used as connectors to energize the electrodes. Due to large displacement length of the diaphragm (~3 mm) a high efficiency (~90%) ball valve (2 mm diameter stainless steel ball in a tapered tubing structure) was used in the pump outlet. The micropump exhibits a flow rate as high as 490 μl/s and pressure up to 1.5 kPa showing that the pump is categorized among high-flow-rate mechanical micropumps.

  17. Anisotropy of MHD Turbulence at Low Magnetic Reynolds Number

    NASA Technical Reports Server (NTRS)

    Zikanov, O.; Vorobev, A.; Thess, A.; Davidson, P. A.; Knaepen, B.

    2004-01-01

    Turbulent fluctuations in MHD flows are known to become dimensionally anisotropic under the action of a sufficiently strong magnetic field. We consider the technologically relevant case of low magnetic Reynolds number and apply the method of DNS of forced flow in a periodic box to generate velocity fields. The analysis based on different anisotropy characteristics shows that the dimensional anisotropy is virtually scale-independent. We also find that, except for the case of very strong magnetic field, the flow is componentally isotropic. Its kinetic energy is practically uniformly distributed among the velocity components.

  18. Contact force with magnetic-guided catheter ablation.

    PubMed

    Bessière, Francis; Zikry, Christopher; Rivard, Lena; Dyrda, Katia; Khairy, Paul

    2018-05-01

    Achieving adequate catheter tip-tissue contact is essential for delivering robust radiofrequency (RF) ablation lesions. We measured the contact force generated by a remote magnetic-guided catheter navigation system. A plexiglass model with an integrated scale was fashioned to mimic transvenous and retrograde access to sites in the right atrium and right and left ventricles. An 8 Fr RF ablation catheter was steered by remote magnetic guidance at fields of 0.08 and 0.10 T, with and without a long sheath positioned at the entrance of the chamber. Ten contact force readings were taken at each setting, with the scale recalibrated prior to each measurement. Generalized estimating equations were used to compare contact force measurements while adjusting for the non-independent data structure. A total of 240 contact force measurements were taken. Without a long sheath, contact forces with magnetic fields of 0.10 T (n = 60) and 0.08 T (n = 60) were similar (6.1 ± 1.4 g vs. 6.0 ± 1.3 g, P = 0.089). Contact forces were not significantly different with simulated transvenous (n = 80) and retrograde aortic (n = 40) approaches (6.2 ± 1.4 g vs. 5.7 ± 1.2 g, P = 0.132). The contact force increased substantially with a long sheath (P < 0.001) and was significantly higher with 0.10 T (n = 60) vs. 0.08 T (n = 60) fields (20.4 ± 0.6 g vs. 18.0 ± 0.5 g, P < 0.001). Magnetic fields of 0.08 and 0.10 T provide stable catheter contact forces, as reflected by the small variability between measurements. The average contact force is approximately 6 g without a sheath and increases to 20 g with a long sheath positioned at the entrance of the chamber of interest.

  19. Theoretical study of the generation of terahertz radiation by the interaction of two laser beams with graphite nanoparticles

    NASA Astrophysics Data System (ADS)

    Sepehri Javan, N.; Rouhi Erdi, F.

    2017-12-01

    In this theoretical study, we investigate the generation of terahertz radiation by considering the beating of two similar Gaussian laser beams with different frequencies of ω1 and ω2 in a spatially modulated medium of graphite nanoparticles. The medium is assumed to contain spherical graphite nanoparticles of two different configurations: in the first configuration, the electric fields of the laser beams are parallel to the normal vector of the basal plane of the graphite structure, whereas in the second configuration, the electric fields are perpendicular to the normal vector of the basal plane. The interaction of the electric fields of lasers with the electronic clouds of the nanoparticles generates a ponderomotive force that in turn leads to the creation of a macroscopic electron current in the direction of laser polarizations and at the beat frequency ω1-ω2 , which can generate terahertz radiation. We show that, when the beat frequency lies near the effective plasmon frequency of the nanoparticles and the electric fields are parallel to the basal-plane normal, a resonant interaction of the laser beams causes intense terahertz radiation.

  20. The influence of electromagnetic radiation generated by a mobile phone on the skeletal system of rats.

    PubMed

    Sieroń-Stołtny, Karolina; Teister, Łukasz; Cieślar, Grzegorz; Sieroń, Dominik; Śliwinski, Zbigniew; Kucharzewski, Marek; Sieroń, Aleksander

    2015-01-01

    The study was focused on the influence of electromagnetic field generated by mobile phone on the skeletal system of rats, assessed by measuring the macrometric parameters of bones, mechanical properties of long bones, calcium and phosphorus content in bones, and the concentration of osteogenesis (osteocalcin) and bone resorption (NTX, pyridinoline) markers in blood serum. The study was carried out on male rats divided into two groups: experimental group subjected to 28-day cycle of exposures in electromagnetic field of 900 MHz frequency generated by mobile phone and a control, sham-exposed one. The mobile phone-generated electromagnetic field did not influence the macrometric parameters of long bones and L4 vertebra, it altered mechanical properties of bones (stress and energy at maximum bending force, stress at fracture), it decreased the content of calcium in long bones and L4 vertebra, and it altered the concentration of osteogenesis and bone resorption markers in rats. On the basis of obtained results, it was concluded that electromagnetic field generated by 900 MHz mobile phone does not have a direct impact on macrometric parameters of bones; however, it alters the processes of bone mineralization and the intensity of bone turnover processes and thus influences the mechanical strength of bones.

  1. The Influence of Electromagnetic Radiation Generated by a Mobile Phone on the Skeletal System of Rats

    PubMed Central

    Sieroń-Stołtny, Karolina; Teister, Łukasz; Cieślar, Grzegorz; Sieroń, Dominik; Śliwinski, Zbigniew; Sieroń, Aleksander

    2015-01-01

    The study was focused on the influence of electromagnetic field generated by mobile phone on the skeletal system of rats, assessed by measuring the macrometric parameters of bones, mechanical properties of long bones, calcium and phosphorus content in bones, and the concentration of osteogenesis (osteocalcin) and bone resorption (NTX, pyridinoline) markers in blood serum. The study was carried out on male rats divided into two groups: experimental group subjected to 28-day cycle of exposures in electromagnetic field of 900 MHz frequency generated by mobile phone and a control, sham-exposed one. The mobile phone-generated electromagnetic field did not influence the macrometric parameters of long bones and L4 vertebra, it altered mechanical properties of bones (stress and energy at maximum bending force, stress at fracture), it decreased the content of calcium in long bones and L4 vertebra, and it altered the concentration of osteogenesis and bone resorption markers in rats. On the basis of obtained results, it was concluded that electromagnetic field generated by 900 MHz mobile phone does not have a direct impact on macrometric parameters of bones; however, it alters the processes of bone mineralization and the intensity of bone turnover processes and thus influences the mechanical strength of bones. PMID:25705697

  2. Algorithms for Zonal Methods and Development of Three Dimensional Mesh Generation Procedures.

    DTIC Science & Technology

    1984-02-01

    a r-re complete set of equations is used, but their effect is imposed by means of a right hand side forcing function, not by means of a zonal boundary...modifications of flow-simulation algorithms The explicit finite-difference code of Magnus and are discussed. Computational tests in two dimensions...used to simplify the task of grid generation without an adverse achieve computational efficiency. More recently, effect on flow-field algorithms and

  3. On the theory of Lorentz gases with long range interactions

    NASA Astrophysics Data System (ADS)

    Nota, Alessia; Simonella, Sergio; Velázquez, Juan J. L.

    We construct and study the stochastic force field generated by a Poisson distribution of sources at finite density, x1,x2,…, in ℝ3 each of them yielding a long range potential QiΦ(x - xi) with possibly different charges Qi ∈ ℝ. The potential Φ is assumed to behave typically as |x|-s for large |x|, with s > 1/2. We will denote the resulting random field as “generalized Holtsmark field”. We then consider the dynamics of one tagged particle in such random force fields, in several scaling limits where the mean free path is much larger than the average distance between the scatterers. We estimate the diffusive time scale and identify conditions for the vanishing of correlations. These results are used to obtain appropriate kinetic descriptions in terms of a linear Boltzmann or Landau evolution equation depending on the specific choices of the interaction potential.

  4. Fabrication and Manipulation of Ciliary Microrobots with Non-reciprocal Magnetic Actuation

    PubMed Central

    Kim, Sangwon; Lee, Seungmin; Lee, Jeonghun; Nelson, Bradley J.; Zhang, Li; Choi, Hongsoo

    2016-01-01

    Magnetically actuated ciliary microrobots were designed, fabricated, and manipulated to mimic cilia-based microorganisms such as paramecia. Full three-dimensional (3D) microrobot structures were fabricated using 3D laser lithography to form a polymer base structure. A nickel/titanium bilayer was sputtered onto the cilia part of the microrobot to ensure magnetic actuation and biocompatibility. The microrobots were manipulated by an electromagnetic coil system, which generated a stepping magnetic field to actuate the cilia with non-reciprocal motion. The cilia beating motion produced a net propulsive force, resulting in movement of the microrobot. The magnetic forces on individual cilia were calculated with various input parameters including magnetic field strength, cilium length, applied field angle, actual cilium angle, etc., and the translational velocity was measured experimentally. The position and orientation of the ciliary microrobots were precisely controlled, and targeted particle transportation was demonstrated experimentally. PMID:27470077

  5. Analytical solution for the diffusion of a capacitor discharge generated magnetic field pulse in a conductor

    NASA Astrophysics Data System (ADS)

    Grants, Ilmārs; Bojarevičs, Andris; Gerbeth, Gunter

    2016-06-01

    Powerful forces arise when a pulse of a magnetic field in the order of a few tesla diffuses into a conductor. Such pulses are used in electromagnetic forming, impact welding of dissimilar materials and grain refinement of solidifying alloys. Strong magnetic field pulses are generated by the discharge current of a capacitor bank. We consider analytically the penetration of such pulse into a conducting half-space. Besides the exact solution we obtain two simple self-similar approximate solutions for two sequential stages of the initial transient. Furthermore, a general solution is provided for the external field given as a power series of time. Each term of this solution represents a self-similar function for which we obtain an explicit expression. The validity range of various approximate analytical solutions is evaluated by comparison to the exact solution.

  6. High shear rate flow in a linear stroke magnetorheological energy absorber

    NASA Astrophysics Data System (ADS)

    Hu, W.; Wereley, N. M.; Hiemenz, G. J.; Ngatu, G. T.

    2014-05-01

    To provide adaptive stroking load in the crew seats of ground vehicles to protect crew from blast or impact loads, a magnetorheological energy absorber (MREA) or shock absorber was developed. The MREA provides appropriate levels of controllable stroking load for different occupant weights and peak acceleration because the viscous stroking load generated by the MREA force increases with velocity squared, thereby reducing its controllable range at high piston velocity. Therefore, MREA behavior at high piston velocity is analyzed and validated experimentally in order to investigate the effects of velocity and magnetic field on MREA performance. The analysis used to predict the MREA force as a function of piston velocity squared and applied field is presented. A conical fairing is mounted to the piston head of the MREA in order reduce predicted inlet flow loss by 9% at nominal velocity of 8 m/s, which resulted in a viscous force reduction of nominally 4%. The MREA behavior is experimentally measured using a high speed servo-hydraulic testing system for speeds up to 8 m/s. The measured MREA force is used to validate the analysis, which captures the transient force quite accurately, although the peak force is under-predicted at the peak speed of 8 m/s.

  7. A new, simple electrostatic-acoustic hybrid levitator

    NASA Technical Reports Server (NTRS)

    Lierke, E. G.; Loeb, H.; Gross, D.

    1990-01-01

    Battelle has developed a hybrid levitator by combining the known single-axis acoustic standing wave levitator with a coaxial DC electric field. The resulting Coulomb forces on the charged liquid or solid sample support its weight and, together with the acoustic force, center the sample. Liquid samples with volumes approximately less than 100 micro-liters are deployed from a syringe reservoir into the acoustic pressure node. The sample is charged using a miniature high voltage power supply (approximately less than 20 kV) connected to the syringe needle. As the electric field, generated by a second miniature power supply, is increased, the acoustic intensity is reduced. The combination of both fields allows stable levitation of samples larger than either single technique could position on the ground. Decreasing the acoustic intensity reduces acoustic convection and sample deformation. Neither the electrostatic nor the acoustic field requires sample position sensing or active control. The levitator, now used for static and dynamic fluid physics investigations on the ground, can be easily modified for space operations.

  8. The Effects of the Interplay between Motor and Brownian Forces on the Rheology of Active Gels.

    PubMed

    Córdoba, Andrés

    2018-04-19

    Active gels perform key mechanical roles inside the cell, such as cell division, motion, and force sensing. The unique mechanical properties required to perform such functions arise from the interactions between molecular motors and semiflexible polymeric filaments. Molecular motors can convert the energy released in the hydrolysis of ATP into forces of up to piconewton magnitudes. Moreover, the polymeric filaments that form active gels are flexible enough to respond to Brownian forces but also stiff enough to support the large tensions induced by the motor-generated forces. Brownian forces are expected to have a significant effect especially at motor activities at which stable noncontractile in vitro active gels are prepared for rheological measurements. Here, a microscopic mean-field theory of active gels originally formulated in the limit of motor-dominated dynamics is extended to include Brownian forces. In the model presented here, Brownian forces are included accurately, at real room temperature, even in systems with high motor activity. It is shown that a subtle interplay, or competition, between motor-generated forces and Brownian forces has an important impact on the mass transport and rheological properties of active gels. The model predictions show that at low frequencies the dynamic modulus of active gels is determined mostly by motor protein dynamics. However, Brownian forces significantly increase the breadth of the relaxation spectrum and can affect the shape of the dynamic modulus over a wide frequency range even for ratios of motor to Brownian forces of more than a hundred. Since the ratio between motor and Brownian forces is sensitive to ATP concentration, the results presented here shed some light on how the transient mechanical response of active gels changes with varying ATP concentration.

  9. A comparative analysis of physiological responses at submaximal workloads during different laboratory simulations of field cycling.

    PubMed

    Kenny, G P; Reardon, F D; Marion, A; Thoden, J S

    1995-01-01

    The purpose of this study was to evaluate the relationships between heart rate (fc), oxygen consumption (VO2), peak force and average force developed at the crank in response to submaximal exercise employing a racing bicycle which was attached to an ergometer (RE), ridden on a treadmill (TC) and ridden on a 400-m track (FC). Eight male trained competitive cyclists rode at three pre-determined work intensities set at a proportion of their maximal oxygen consumption (VO2max): (1) below lactate threshold [work load that produces a VO2 which is 10% less than the lactate threshold VO2 (sub-LT)], (2) lactate threshold VO2 (LT), and (3) above lactate threshold [workload that produces a VO2 which is 10% greater than lactate threshold VO2 (supra-LT)], and equated across exercise modes on the basis of fc. Voltage signals from the crank arm were recorded as FM signals for subsequent representation of peak and average force. Open circuit VO2 measurements were done in the field by Douglas bag gas collection and in the laboratory by automated gas collection and analysis. fc was recorded with a telemeter (Polar Electro Sport Tester, PE3000). Significant differences (P < 0.05) were observed: (1) in VO2 between FC and both laboratory conditions at sub-LT intensity and LT intensities, (2) in peak force between FC and TC at sub-LT intensity, (3) in average force between FC and RE at sub-LT. No significant differences were demonstrated at supra-LT intensity for VO2. Similarly no significant differences were observed in peak and average force for either LT or supra-LT intensities. These data indicate that equating work intensities on the basis of fc measured in laboratory conditions would overestimate the VO2 which would be generated in the field and conversely, that using fc measured in the laboratory to establish field work intensity would underestimate mechanical workload experienced in the field.

  10. Structure formation by a fifth force: N-body versus linear simulations

    NASA Astrophysics Data System (ADS)

    Li, Baojiu; Zhao, Hongsheng

    2009-08-01

    We lay out the frameworks to numerically study the structure formation in both linear and nonlinear regimes in general dark-matter-coupled scalar field models, and give an explicit example where the scalar field serves as a dynamical dark energy. Adopting parameters of the scalar field which yield a realistic cosmic microwave background (CMB) spectrum, we generate the initial conditions for our N-body simulations, which follow the spatial distributions of the dark matter and the scalar field by solving their equations of motion using the multilevel adaptive grid technique. We show that the spatial configuration of the scalar field tracks well the voids and clusters of dark matter. Indeed, the propagation of scalar degree of freedom effectively acts as a fifth force on dark matter particles, whose range and magnitude are determined by the two model parameters (μ,γ), local dark matter density as well as the background value for the scalar field. The model behaves like the ΛCDM paradigm on scales relevant to the CMB spectrum, which are well beyond the probe of the local fifth force and thus not significantly affected by the matter-scalar coupling. On scales comparable or shorter than the range of the local fifth force, the fifth force is perfectly parallel to gravity and their strengths have a fixed ratio 2γ2 determined by the matter-scalar coupling, provided that the chameleon effect is weak; if on the other hand there is a strong chameleon effect (i.e., the scalar field almost resides at its effective potential minimum everywhere in the space), the fifth force indeed has suppressed effects in high density regions and shows no obvious correlation with gravity, which means that the dark-matter-scalar-field coupling is not simply equivalent to a rescaling of the gravitational constant or the mass of the dark matter particles. We show these spatial distributions and (lack of) correlations at typical redshifts (z=0,1,5.5) in our multigrid million-particle simulations. The viable parameters for the scalar field can be inferred on intermediate or small scales at late times from, e.g., weak lensing and phase space properties, while the predicted Hubble expansion and linearly simulated CMB spectrum are virtually indistinguishable from the standard ΛCDM predictions.

  11. An application of eddy current damping effect on single point diamond turning of titanium alloys

    NASA Astrophysics Data System (ADS)

    Yip, W. S.; To, S.

    2017-11-01

    Titanium alloys Ti6Al4V (TC4) have been popularly applied in many industries. They have superior material properties including an excellent strength-to-weight ratio and corrosion resistance. However, they are regarded as difficult to cut materials; serious tool wear, a high level of cutting vibration and low surface integrity are always involved in machining processes especially in ultra-precision machining (UPM). In this paper, a novel hybrid machining technology using an eddy current damping effect is firstly introduced in UPM to suppress machining vibration and improve the machining performance of titanium alloys. A magnetic field was superimposed on samples during single point diamond turning (SPDT) by exposing the samples in between two permanent magnets. When the titanium alloys were rotated within a magnetic field in the SPDT, an eddy current was generated through a stationary magnetic field inside the titanium alloys. An eddy current generated its own magnetic field with the opposite direction of the external magnetic field leading a repulsive force, compensating for the machining vibration induced by the turning process. The experimental results showed a remarkable improvement in cutting force variation, a significant reduction in adhesive tool wear and an extreme long chip formation in comparison to normal SPDT of titanium alloys, suggesting the enhancement of the machinability of titanium alloys using an eddy current damping effect. An eddy current damping effect was firstly introduced in the area of UPM to deliver the results of outstanding machining performance.

  12. Is the Conformational Ensemble of Alzheimer’s Aβ10-40 Peptide Force Field Dependent?

    PubMed Central

    Siwy, Christopher M.

    2017-01-01

    By applying REMD simulations we have performed comparative analysis of the conformational ensembles of amino-truncated Aβ10-40 peptide produced with five force fields, which combine four protein parameterizations (CHARMM36, CHARMM22*, CHARMM22/cmap, and OPLS-AA) and two water models (standard and modified TIP3P). Aβ10-40 conformations were analyzed by computing secondary structure, backbone fluctuations, tertiary interactions, and radius of gyration. We have also calculated Aβ10-40 3JHNHα-coupling and RDC constants and compared them with their experimental counterparts obtained for the full-length Aβ1-40 peptide. Our study led us to several conclusions. First, all force fields predict that Aβ adopts unfolded structure dominated by turn and random coil conformations. Second, specific TIP3P water model does not dramatically affect secondary or tertiary Aβ10-40 structure, albeit standard TIP3P model favors slightly more compact states. Third, although the secondary structures observed in CHARMM36 and CHARMM22/cmap simulations are qualitatively similar, their tertiary interactions show little consistency. Fourth, two force fields, OPLS-AA and CHARMM22* have unique features setting them apart from CHARMM36 or CHARMM22/cmap. OPLS-AA reveals moderate β-structure propensity coupled with extensive, but weak long-range tertiary interactions leading to Aβ collapsed conformations. CHARMM22* exhibits moderate helix propensity and generates multiple exceptionally stable long- and short-range interactions. Our investigation suggests that among all force fields CHARMM22* differs the most from CHARMM36. Fifth, the analysis of 3JHNHα-coupling and RDC constants based on CHARMM36 force field with standard TIP3P model led us to an unexpected finding that in silico Aβ10-40 and experimental Aβ1-40 constants are generally in better agreement than these quantities computed and measured for identical peptides, such as Aβ1-40 or Aβ1-42. This observation suggests that the differences in the conformational ensembles of Aβ10-40 and Aβ1-40 are small and the former can be used as proxy of the full-length peptide. Based on this argument, we concluded that CHARMM36 force field with standard TIP3P model produces the most accurate representation of Aβ10-40 conformational ensemble. PMID:28085875

  13. Development and characterization of a multi-layer magnetorheological elastomer isolator based on a Halbach array

    NASA Astrophysics Data System (ADS)

    Przybylski, Michal; Sun, Shuaishuai; Li, Weihua

    2016-10-01

    Most existing vibration isolators and dampers based on magnetorheological (MR) materials need electrical power to feed magnetic coils to stimulate the MR material, so if there is a loss of power, such as during a strong earthquake or system failure, they are unable to protect the structure. This paper outlines the design and test of a controllable multilayered magnetorheological elastomer (MRE) isolator based on a circular dipolar Halbach array; which is a set of magnets that generates a strong and uniform magnetic field. Combining an MRE layered isolator system with the Halbach array allows for constant vibration isolation with very low power consumption, where the power generated is only used to adjust the Halbach position. When this system was tested it successfully altered the lateral stiffness and damping force by 81.13% and 148.72%, respectively. This paper also includes an extended analysis of the magnetic field generated by the circular dipolar Halbach array and a discussion of the improvements that may potentially improve the range of magnetic fields generated.

  14. Electrostatics of proteins in dielectric solvent continua. I. Newton's third law marries qE forces

    NASA Astrophysics Data System (ADS)

    Stork, Martina; Tavan, Paul

    2007-04-01

    The authors reformulate and revise an electrostatic theory treating proteins surrounded by dielectric solvent continua [B. Egwolf and P. Tavan, J. Chem. Phys. 118, 2039 (2003)] to make the resulting reaction field (RF) forces compatible with Newton's third law. Such a compatibility is required for their use in molecular dynamics (MD) simulations, in which the proteins are modeled by all-atom molecular mechanics force fields. According to the original theory the RF forces, which are due to the electric field generated by the solvent polarization and act on the partial charges of a protein, i.e., the so-called qE forces, can be quite accurately computed from Gaussian RF dipoles localized at the protein atoms. Using a slightly different approximation scheme also the RF energies of given protein configurations are obtained. However, because the qE forces do not account for the dielectric boundary pressure exerted by the solvent continuum on the protein, they do not obey the principle that actio equals reactio as required by Newton's third law. Therefore, their use in MD simulations is severely hampered. An analysis of the original theory has led the authors now to a reformulation removing the main difficulties. By considering the RF energy, which represents the dominant electrostatic contribution to the free energy of solvation for a given protein configuration, they show that its negative configurational gradient yields mean RF forces obeying the reactio principle. Because the evaluation of these mean forces is computationally much more demanding than that of the qE forces, they derive a suggestion how the qE forces can be modified to obey Newton's third law. Various properties of the thus established theory, particularly issues of accuracy and of computational efficiency, are discussed. A sample application to a MD simulation of a peptide in solution is described in the following paper [M. Stork and P. Tavan, J. Chem. Phys., 126, 165106 (2007).

  15. Large-scale Vortex Generation and Evolution in Short-crested Isolated Wave Breaking

    NASA Astrophysics Data System (ADS)

    Derakhti, M.; Kirby, J. T., Jr.

    2016-12-01

    Peregrine (1999), in discussing the effect of localization of wave energy dissipation as a generation mechanism for vorticity at the scale of individual waves, spurred a wave of study of vorticity dynamics and mixing processes in the wave-driven ocean. In deep water, the limited depth of penetration of breaking effects leads to the conceptual forcing of a "smoke-ring" resulting from the localized cross-section of impulsive forcing (Pizzo and Melville, 2013). In shallow water, depth limitations favor the generation of a quasi-two-dimensional field of vertical vortex structures, with a resulting inverse cascade of energy to low wavenumbers and the evolution of flows such as transient rip currents (Johnson and Pattiaratchi, 2006). In this study, we are examining a more detailed picture of the vorticity field evolving during a localized breaking event, with particular interest in the span from deep water to shallow water, with special attention to the transition from weak to strong bottom control. Using an LES/VOF model (Derakhti and Kirby, 2014), we examine the evolution of coherent vortex structures whose initial scales are determined by the width of the breaking region, and are much larger than the locally-controlled reverse horseshoe structures seen in typical studies of along-crest uniform breaking. We study the persistence of three-dimensionality of these structures and their contribution to the development of depth-integrated vertical vorticity, and comment on the suitability of 2D or quasi-3D models to represent nearshore flow fields.

  16. Cavity-induced microstreaming for simultaneous on-chip pumping and size-based separation of cells and particles.

    PubMed

    Patel, Maulik V; Nanayakkara, Imaly A; Simon, Melinda G; Lee, Abraham P

    2014-10-07

    We present a microfluidic platform for simultaneous on-chip pumping and size-based separation of cells and particles without external fluidic control systems required for most existing platforms. The device utilizes an array of acoustically actuated air/liquid interfaces generated using dead-end side channels termed Lateral Cavity Acoustic Transducers (LCATs). The oscillating interfaces generate local streaming flow while the angle of the LCATs relative to the main channel generates a global bulk flow from the inlet to the outlet. The interaction of these two competing velocity fields (i.e. global bulk velocity vs. local streaming velocity) is responsible for the observed separation. It is shown that the separation of 5 μm and 10 μm polystyrene beads is dependent on the ratio of these two competing velocity fields. The experimental and simulation results suggest that particle trajectories based only on Stokes drag force cannot fully explain the separation behavior and that the impact of additional forces due to the oscillating flow field must be considered to determine the trajectory of the beads and ultimately the separation behavior of the device. To demonstrate an application of this separation platform with cellular components, smaller red blood cells (7.5 ± 0.8 μm) are separated from larger K562 cells (16.3 ± 2.0 μm) with viabilities comparable to those of controls based on a trypan blue exclusion assay.

  17. Acoustic concentration of particles in fluid flow

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ward, Michael W.; Kaduchak, Gregory

    Disclosed herein is a acoustic concentration of particles in a fluid flow that includes a substantially acoustically transparent membrane and a vibration generator that define a fluid flow path therebetween. The fluid flow path is in fluid communication with a fluid source and a fluid outlet and the vibration generator is disposed adjacent the fluid flow path and is capable of producing an acoustic field in the fluid flow path. The acoustic field produces at least one pressure minima in the fluid flow path at a predetermined location within the fluid flow path and forces predetermined particles in the fluidmore » flow path to the at least one pressure minima.« less

  18. Electrodynamic Tether Propulsion and Power Generation at Jupiter

    NASA Technical Reports Server (NTRS)

    Gallagher, D. L.; Johnson, L.; Moore, J.; Bagenal, F.

    1998-01-01

    The results of a study performed to evaluate the feasibility and merits of using an electrodynamic tether for propulsion and power generation for a spacecraft in the Jovian system are presented. The environment of the Jovian system has properties which are particularly favorable for utilization of an electrodynamic tether. Specifically, the planet has a strong magnetic field and the mass of the planet dictates high orbital velocities which, when combined with the planet's rapid rotation rate, can produce very large relative velocities between the magnetic field and the spacecraft. In a circular orbit close to the planet, tether propulsive forces are found to be as high as 50 N and power levels as high as 1 MW.

  19. Compressible viscous flows generated by oscillating flexible cylinders

    NASA Astrophysics Data System (ADS)

    Van Eysden, Cornelis A.; Sader, John E.

    2009-01-01

    The fluid dynamics of oscillating elastic beams underpin the operation of many modern technological devices ranging from micromechanical sensors to the atomic force microscope. While viscous effects are widely acknowledged to have a strong influence on these dynamics, fluid compressibility is commonly neglected. Here, we theoretically study the three-dimensional flow fields that are generated by the motion of flexible cylinders immersed in viscous compressible fluids and discuss the implications of compressibility in practice. We consider cylinders of circular cross section and flat blades of zero thickness that are executing flexural and torsional oscillations of arbitrary wave number. Exact analytical solutions are derived for these flow fields and their resulting hydrodynamic loads.

  20. The Goodrich 3rd generation DB-110 system: operational on tactical and unmanned aircraft

    NASA Astrophysics Data System (ADS)

    Iyengar, Mrinal; Lange, Davis

    2006-05-01

    Goodrich's DB-110 Reconnaissance Airborne Pod for TORnado (RAPTOR) and Data Link Ground Station (DLGS) have been used operationally for several years by the Royal Air Force (RAF). A variant of the RAPTOR DB-110 Sensor System is currently being used by the Japan Maritime Self Defense Force (JMSDF). Recently, the DB-110 system was flown on the Predator B Unmanned Aerial Vehicle (UAV), demonstrating the DB-110 system's utility on unmanned reconnaissance aircraft. The DB-110 is a dual-band EO and IR imaging capability for long, medium, and short standoff ranges, including oblique and over-flight imaging, in a single sensor package. The DB-110 system has also proven performance for real-time high bandwidth data link imagery transmission. Goodrich has leveraged this operational experience in building a 3rd Generation DB-110 system including new Reconnaissance Airborne Pod and Ground System, to be first used by the Polish Air Force. This 3rd Generation system maintains all the capability of the current 2nd Generation DB-110 system and adds several new features. The 3rd Generation system upgrades include an increase in resolution via new focal planes, addition of a third ("super-wide") field of view, and new avionics. This paper summarizes the Goodrich DB-110 3rd Generation System in terms of its basic design and capabilities. Recent demonstration of the DB-110 on the Predator B UAV is overviewed including sample imagery.

  1. Development of eddy current microscopy for high resolution electrical conductivity imaging using atomic force microscopy.

    PubMed

    Nalladega, V; Sathish, S; Jata, K V; Blodgett, M P

    2008-07-01

    We present a high resolution electrical conductivity imaging technique based on the principles of eddy current and atomic force microscopy (AFM). An electromagnetic coil is used to generate eddy currents in an electrically conducting material. The eddy currents generated in the conducting sample are detected and measured with a magnetic tip attached to a flexible cantilever of an AFM. The eddy current generation and its interaction with the magnetic tip cantilever are theoretically modeled using monopole approximation. The model is used to estimate the eddy current force between the magnetic tip and the electrically conducting sample. The theoretical model is also used to choose a magnetic tip-cantilever system with appropriate magnetic field and spring constant to facilitate the design of a high resolution electrical conductivity imaging system. The force between the tip and the sample due to eddy currents is measured as a function of the separation distance and compared to the model in a single crystal copper. Images of electrical conductivity variations in a polycrystalline dual phase titanium alloy (Ti-6Al-4V) sample are obtained by scanning the magnetic tip-cantilever held at a standoff distance from the sample surface. The contrast in the image is explained based on the electrical conductivity and eddy current force between the magnetic tip and the sample. The spatial resolution of the eddy current imaging system is determined by imaging carbon nanofibers in a polymer matrix. The advantages, limitations, and applications of the technique are discussed.

  2. Bubble Detachment in Variable Gravity Under the Influence of a Non-Uniform Electric Field

    NASA Technical Reports Server (NTRS)

    Chang, Shinan; Herman, Cila; Iacona, Estelle

    2002-01-01

    The objective of the study reported in this paper is to investigate the effects of variable, reduced gravity on the formation and detachment behavior of individual air bubbles under the influence of a non-uniform electric field. For this purpose, variable gravity experiments were carried out in parabolic nights. The non-uniform electric field was generated by a spherical electrode and a plate electrode. The effect of the magnitude of the non-uniform electric field and gravity level on bubble formation, development and detachment at an orifice was investigated. An image processing code was developed that allows the measurement of bubble volume, dimensions and contact angle at detachment. The results of this research can be used to explore the possibility of enhancing boiling heat transfer in the variable and low gravity environments by substituting the buoyancy force with a force induced by the electric field. The results of experiments and measurements indicate that the level of gravity significantly affects bubble shape, size and frequency. The electric field magnitude also influences bubble detachment, however, its impact is not as profound as that of variable gravity for the range of electric field magnitudes investigated in the present study.

  3. Cell force mapping using a double-sided micropillar array based on the moiré fringe method

    NASA Astrophysics Data System (ADS)

    Zhang, F.; Anderson, S.; Zheng, X.; Roberts, E.; Qiu, Y.; Liao, R.; Zhang, X.

    2014-07-01

    The mapping of traction forces is crucial to understanding the means by which cells regulate their behavior and physiological function to adapt to and communicate with their local microenvironment. To this end, polymeric micropillar arrays have been used for measuring cell traction force. However, the small scale of the micropillar deflections induced by cell traction forces results in highly inefficient force analyses using conventional optical approaches; in many cases, cell forces may be below the limits of detection achieved using conventional microscopy. To address these limitations, the moiré phenomenon has been leveraged as a visualization tool for cell force mapping due to its inherent magnification effect and capacity for whole-field force measurements. This Letter reports an optomechanical cell force sensor, namely, a double-sided micropillar array (DMPA) made of poly(dimethylsiloxane), on which one side is employed to support cultured living cells while the opposing side serves as a reference pattern for generating moiré patterns. The distance between the two sides, which is a crucial parameter influencing moiré pattern contrast, is predetermined during fabrication using theoretical calculations based on the Talbot effect that aim to optimize contrast. Herein, double-sided micropillar arrays were validated by mapping mouse embryo fibroblast contraction forces and the resulting force maps compared to conventional microscopy image analyses as the reference standard. The DMPA-based approach precludes the requirement for aligning two independent periodic substrates, improves moiré contrast, and enables efficient moiré pattern generation. Furthermore, the double-sided structure readily allows for the integration of moiré-based cell force mapping into microfabricated cell culture environments or lab-on-a-chip devices.

  4. Manipulating Neutral Atoms in Chip-Based Magnetic Traps

    NASA Technical Reports Server (NTRS)

    Aveline, David; Thompson, Robert; Lundblad, Nathan; Maleki, Lute; Yu, Nan; Kohel, James

    2009-01-01

    Several techniques for manipulating neutral atoms (more precisely, ultracold clouds of neutral atoms) in chip-based magnetic traps and atomic waveguides have been demonstrated. Such traps and waveguides are promising components of future quantum sensors that would offer sensitivities much greater than those of conventional sensors. Potential applications include gyroscopy and basic research in physical phenomena that involve gravitational and/or electromagnetic fields. The developed techniques make it possible to control atoms with greater versatility and dexterity than were previously possible and, hence, can be expected to contribute to the value of chip-based magnetic traps and atomic waveguides. The basic principle of these techniques is to control gradient magnetic fields with suitable timing so as to alter a trap to exert position-, velocity-, and/or time-dependent forces on atoms in the trap to obtain desired effects. The trap magnetic fields are generated by controlled electric currents flowing in both macroscopic off-chip electromagnet coils and microscopic wires on the surface of the chip. The methods are best explained in terms of examples. Rather than simply allowing atoms to expand freely into an atomic waveguide, one can give them a controllable push by switching on an externally generated or a chip-based gradient magnetic field. This push can increase the speed of the atoms, typically from about 5 to about 20 cm/s. Applying a non-linear magnetic-field gradient exerts different forces on atoms in different positions a phenomenon that one can exploit by introducing a delay between releasing atoms into the waveguide and turning on the magnetic field.

  5. A Numerical Study on the Influence of the Mid-Atlantic Ridge on Nonlinear Barotropic and First-Mode Baroclinic Rossby Waves Generated by Seasonal Winds.

    DTIC Science & Technology

    1986-12-01

    ridge. Sponge layers protect all boundaries except the eastern one from wave reflexion. The model is forced by a purely fluctuating wind stress curl...which propagate westward. This is a new feature of the time- dependent wind driven ocean circulation. Barnier uses a wind stress curl field patterned...forced by a purely fluctuating wind stress curl derived from the most significant EOF’s of the FGGE winds. A flat bottom and a ridge experiment are

  6. User satisfaction and forces generated during laryngoscopy using disposable Miller blades: a manikin study.

    PubMed

    Sudhir, G; Wilkes, A R; Clyburn, P; Aguilera, I; Hall, J E

    2007-10-01

    Increasing awareness of prion-related diseases has led to an increase in the number of disposable laryngoscope blades available. We compared 11 disposable and standard re-usable Miller size 1 blades. In this manikin-based study, we studied user satisfaction for field of view at laryngoscopy, build quality and users' willingness to use the blade in an emergency situation. These were found to be better with metal disposable blades (p

  7. Development of a persistent chemical agent simulation system

    NASA Technical Reports Server (NTRS)

    1983-01-01

    A Persistent Chemical Agent Simulation System was developed (PCASS) to simulate, for force-on-force training exercises, the field environment produced by the presence of persistent chemical agents. Such a simulant system must satisfy several requirements to be of value as a training aid. Specifically, it must provide for realistic training which will generate competency in at least the following areas: (1) detection of the persistent agent presence; (2) proper use of protective equipment and procedures; (3) determination of the extent of contamination; and (4) decontamination of equipment and personnel.

  8. Reactor vibration reduction based on giant magnetostrictive materials

    NASA Astrophysics Data System (ADS)

    Rongge, Yan; Weiying, Liu; Yuechao, Wu; Menghua, Duan; Xiaohong, Zhang; Lihua, Zhu; Ling, Weng; Ying, Sun

    2017-05-01

    The vibration of reactors not only produces noise pollution, but also affects the safe operation of reactors. Giant magnetostrictive materials can generate huge expansion and shrinkage deformation in a magnetic field. With the principle of mutual offset between the giant magnetostrictive force produced by the giant magnetostrictive material and the original vibration force of the reactor, the vibration of the reactor can be reduced. In this paper, magnetization and magnetostriction characteristics in silicon steel and the giant magnetostrictive material are measured, respectively. According to the presented magneto-mechanical coupling model including the electromagnetic force and the magnetostrictive force, reactor vibration is calculated. By comparing the vibration of the reactor with different inserted materials in the air gaps between the reactor cores, the vibration reduction effectiveness of the giant magnetostrictive material is validated.

  9. Numerical Investigation of Force-Free Magnetophoresis of Nonspherical Microparticles

    NASA Astrophysics Data System (ADS)

    Zhang, Jie; Wang, Cheng

    2017-11-01

    Our group recently demonstrated novel force-free magnetophoresis to separate nonspherical particles by shape. In this approach, a uniform magnetic field is used to generate a magnetic torque, which breaks the rotational symmetry of the particles and leads to shape-dependent lateral migration of the particles. We use direct numerical simulations to gain a better understanding of this magnetophoresis mechanism by focusing on ellipsoidal microparticles - a representative type of nonspherical particles encountered in biomedical engineering. We study key effects that influence the rotational and translational behaviors, including particle-wall separation distance, direction and strength of the magnetic field, particle aspect ratio and size. The numerical results show that the lateral migration is negligible in the absence of the magnetic field. When the magnetic field is applied, the particles migrate laterally. The migration direction depends on the direction of external magnetic fields, which controls the symmetry property of the particle rotation. These findings agree well with experiments. Our numerical simulations yield a comprehensive understanding of particle migration mechanism, and provide useful guidelines on design of separating devices for non-spherical micro-particles.

  10. Summary of the Madison Dynamo Experiment

    NASA Astrophysics Data System (ADS)

    Kendrick, R. D.; Spence, E. J.; Nornberg, M. D.; Forest, C. B.

    2001-10-01

    A spherical dynamo experiment has been constructed at the University of Wisconsin's liquid sodium facility. The goals of the experiment are to observe and understand magnetic instabilities driven by flow shear in MHD systems, investigate MHD turbulence for magnetic Reynolds numbers of ~100, and understand the role of fluid turbulence in current generation. Magnetic field generation is possible for only specific flow geometries. We have studied and achieved simple roll flow geometries in a full scale water experiment. Results from this experiment have guided the design of the sodium experiment. The experiment consists of a 1 m diameter, spherical stainless steel vessel filled with liquid sodium at 110 Celsius. Two 100 Hp motors with impellers drive flows in the liquid sodium with flow velocities ~ 15 m/s. A gaussian grid of Hall probes on the surface of the sodium vessel measure the generated external magnetic field. Hall probe feed-thru arrays measure the internal field. Preliminary investigations include measurements of the turbulent electromotive force and excitation of magnetic eigenmodes.

  11. Design of the Madison Dynamo Experiment

    NASA Astrophysics Data System (ADS)

    Kendrick, R. D.; Bayliss, R. A.; Forest, C. B.; Nornberg, M. D.; O'Connell, R.; Spence, E. J.

    2003-10-01

    A spherical dynamo experiment has been constructed at the University of Wisconsin's liquid sodium facility. The goals of the experiment are to observe and understand magnetic instabilities driven by flow shear in MHD systems, investigate MHD turbulence for magnetic Reynolds numbers of ˜100, and understand the role of fluid turbulence in current generation. Magnetic field generation is possible for only specific flow geometries. We have studied and achieved simple roll flow geometries in a full scale water experiment. Results from this experiment have guided the design of the sodium experiment. The experiment consists of a 1 m diameter, spherical stainless steel vessel filled with liquid sodium at 110 Celsius. Two 100 Hp motors with impellers drive flows in the liquid sodium with flow velocities ˜ 15 m/s. A grid of Hall probes on the surface of the sodium vessel measure the generated external magnetic field. Hall probe feed-thru arrays measure the internal field. Preliminary investigations include measurements of the turbulent electromotive force and excitation of magnetic eigenmodes.

  12. Optical forces, torques, and force densities calculated at a microscopic level using a self-consistent hydrodynamics method

    NASA Astrophysics Data System (ADS)

    Ding, Kun; Chan, C. T.

    2018-04-01

    The calculation of optical force density distribution inside a material is challenging at the nanoscale, where quantum and nonlocal effects emerge and macroscopic parameters such as permittivity become ill-defined. We demonstrate that the microscopic optical force density of nanoplasmonic systems can be defined and calculated using the microscopic fields generated using a self-consistent hydrodynamics model that includes quantum, nonlocal, and retardation effects. We demonstrate this technique by calculating the microscopic optical force density distributions and the optical binding force induced by external light on nanoplasmonic dimers. This approach works even in the limit when the nanoparticles are close enough to each other so that electron tunneling occurs, a regime in which classical electromagnetic approach fails completely. We discover that an uneven distribution of optical force density can lead to a light-induced spinning torque acting on individual particles. The hydrodynamics method offers us an accurate and efficient approach to study optomechanical behavior for plasmonic systems at the nanoscale.

  13. Young’s modulus calculations for cellulose Iß by MM3 and quantum mechanics

    USDA-ARS?s Scientific Manuscript database

    Quantum mechanics (QM) and molecular mechanics (MM) calculations were performed to elucidate Young’s moduli for a series of cellulose Iß models. Computations using the second generation empirical force field MM3 with a disaccharide cellulose model, 1,4'-O-dimethyl-ß-cellobioside (DMCB), and an analo...

  14. Highly sensitive protein detection by combination of atomic force microscopy fishing with charge generation and mass spectrometry analysis.

    PubMed

    Ivanov, Yuri D; Pleshakova, Tatyana; Malsagova, Krystina; Kozlov, Andrey; Kaysheva, Anna; Kopylov, Arthur; Izotov, Alexander; Andreeva, Elena; Kanashenko, Sergey; Usanov, Sergey; Archakov, Alexander

    2014-10-01

    An approach combining atomic force microscopy (AFM) fishing and mass spectrometry (MS) analysis to detect proteins at ultra-low concentrations is proposed. Fishing out protein molecules onto a highly oriented pyrolytic graphite surface coated with polytetrafluoroethylene film was carried out with and without application of an external electric field. After that they were visualized by AFM and identified by MS. It was found that injection of solution leads to charge generation in the solution, and an electric potential within the measuring cell is induced. It was demonstrated that without an external electric field in the rapid injection input of diluted protein solution the fishing is efficient, as opposed to slow fluid input. The high sensitivity of this method was demonstrated by detection of human serum albumin and human cytochrome b5 in 10(-17) -10(-18) m water solutions. It was shown that an external negative voltage applied to highly oriented pyrolytic graphite hinders the protein fishing. The efficiency of fishing with an external positive voltage was similar to that obtained without applying any voltage. © 2014 FEBS.

  15. Calculation of zero-offset vertical seismic profiles generated by a horizontal point force acting on the surface of an elastic half-space

    USGS Publications Warehouse

    Hsi-Ping, Liu

    1990-01-01

    Impulse responses including near-field terms have been obtained in closed form for the zero-offset vertical seismic profiles generated by a horizontal point force acting on the surface of an elastic half-space. The method is based on the correspondence principle. Through transformation of variables, the Fourier transform of the elastic impulse response is put in a form such that the Fourier transform of the corresponding anelastic impulse response can be expressed as elementary functions and their definite integrals involving distance angular frequency, phase velocities, and attenuation factors. These results are used for accurate calculation of shear-wave arrival rise times of synthetic seismograms needed for data interpretation of anelastic-attenuation measurements in near-surface sediment. -Author

  16. Huygens-Fresnel Acoustic Interference and the Development of Robust Time-Averaged Patterns from Traveling Surface Acoustic Waves

    NASA Astrophysics Data System (ADS)

    Devendran, Citsabehsan; Collins, David J.; Ai, Ye; Neild, Adrian

    2017-04-01

    Periodic pattern generation using time-averaged acoustic forces conventionally requires the intersection of counterpropagating wave fields, where suspended micro-objects in a microfluidic system collect along force potential minimizing nodal or antinodal lines. Whereas this effect typically requires either multiple transducer elements or whole channel resonance, we report the generation of scalable periodic patterning positions without either of these conditions. A single propagating surface acoustic wave interacts with the proximal channel wall to produce a knife-edge effect according to the Huygens-Fresnel principle, where these cylindrically propagating waves interfere with classical wave fronts emanating from the substrate. We simulate these conditions and describe a model that accurately predicts the lateral spacing of these positions in a robust and novel approach to acoustic patterning.

  17. Generation of intermittent gravitocapillary waves via parametric forcing

    NASA Astrophysics Data System (ADS)

    Castillo, Gustavo; Falcón, Claudio

    2018-04-01

    We report on the generation of an intermittent wave field driven by a horizontally moving wave maker interacting with Faraday waves. The spectrum of the local gravitocapillary surface wave fluctuations displays a power law in frequency for a wide range of forcing parameters. We compute the probability density function of the local surface height increments, which show that they change strongly across time scales. The structure functions of these increments are shown to display power laws as a function of the time lag, with exponents that are nonlinear functions of the order of the structure function. We argue that the origin of this scale-invariant intermittent spectrum is the Faraday wave pattern breakup due to its advection by the propagating gravity waves. Finally, some interpretations are proposed to explain the appearance of this intermittent spectrum.

  18. Conductivity affects nanosecond electrical pulse induced pressure transient formation

    NASA Astrophysics Data System (ADS)

    Roth, Caleb C.; Barnes, Ronald A.; Ibey, Bennett L.; Beier, Hope T.; Glickman, Randolph D.

    2016-03-01

    Nanoporation occurs in cells exposed to high amplitude short duration (< 1μs) electrical pulses. The biophysical mechanism(s) responsible for nanoporation is unknown although several theories exist. Current theories focus exclusively on the electrical field, citing electrostriction, water dipole alignment and/or electrodeformation as the primary mechanisms for pore formation. Our group has shown that mechanical forces of substantial magnitude are also generated during nsEP exposures. We hypothesize that these mechanical forces may contribute to pore formation. In this paper, we report that alteration of the conductivity of the exposure solution also altered the level of mechanical forces generated during a nsEP exposure. By reducing the conductivity of the exposure solutions, we found that we could completely eliminate any pressure transients normally created by nsEP exposure. The data collected for this proceeding does not definitively show that the pressure transients previously identified contribute to nanoporation; however; it indicates that conductivity influences both survival and pressure transient formation.

  19. Apparatus for enhancing tissue repair in mammals

    NASA Technical Reports Server (NTRS)

    Goodwin, Thomas J. (Inventor); Parker, Clayton R. (Inventor)

    2007-01-01

    An apparatus is disclosed for enhancing tissue repair in mammals, with the apparatus comprising: a sleeve for encircling a portion of a mammalian body part, said sleeve comprising an electrically conductive coil capable of generating an electromagnetic field when an electrical current is applied thereto, means for supporting the sleeve on the mammalian body part; and means for supplying the electrically conductive coil with a square wave time varying electrical current sufficient to create a time varying electromagnetic force of from approximately 0.05 gauss to 0.05 gauss within the interior of the coil in order that when the sleeve is placed on a mammalian body part and the time varying electromagnetic force of from approximately 0.05 gauss to 0.05 gauss is generated on the mammalian body part for an extended period of time, tissue regeneration within the mammalian body part is increased to a rate in excess of the normal tissue regeneration rate that would occur without application of the time varying electromagnetic force.

  20. Preliminary characterization of a one-axis acoustic system. [acoustic levitation for space processing

    NASA Technical Reports Server (NTRS)

    Oran, W. A.; Reiss, D. A.; Berge, L. H.; Parker, H. W.

    1979-01-01

    The acoustic fields and levitation forces produced along the axis of a single-axis resonance system were measured. The system consisted of a St. Clair generator and a planar reflector. The levitation force was measured for bodies of various sizes and geometries (i.e., spheres, cylinders, and discs). The force was found to be roughly proportional to the volume of the body until the characteristic body radius reaches approximately 2/k (k = wave number). The acoustic pressures along the axis were modeled using Huygens principle and a method of imaging to approximate multiple reflections. The modeled pressures were found to be in reasonable agreement with those measured with a calibrated microphone.

  1. Simulations of vertical disruptions with VDE code: Hiro and Evans currents

    NASA Astrophysics Data System (ADS)

    Li, Xujing; Di Hu Team; Leonid Zakharov Team; Galkin Team

    2014-10-01

    The recently created numerical code VDE for simulations of vertical instability in tokamaks is presented. The numerical scheme uses the Tokamak MHD model, where the plasma inertia is replaced by the friction force, and an adaptive grid numerical scheme. The code reproduces well the surface currents generated at the plasma boundary by the instability. Five regimes of the vertical instability are presented: (1) Vertical instability in a given plasma shaping field without a wall; (2) The same with a wall and magnetic flux ΔΨ|plX< ΔΨ|Xwall(where X corresponds to the X-point of a separatrix); (3) The same with a wall and magnetic flux ΔΨ|plX> ΔΨ|Xwall; (4) Vertical instability without a wall with a tile surface at the plasma path; (5) The same in the presence of a wall and a tile surface. The generation of negative Hiro currents along the tile surface, predicted earlier by the theory and measured on EAST in 2012, is well-reproduced by simulations. In addition, the instability generates the force-free Evans currents at the free plasma surface. The new pattern of reconnection of the plasma with the vacuum magnetic field is discovered. This work is supported by US DoE Contract No. DE-AC02-09-CH11466.

  2. Integrating proximal soil sensing techniques and terrain indexes to generate 3D maps of soil restrictive layers in the Palouse region, Washington, USA

    NASA Astrophysics Data System (ADS)

    Poggio, Matteo; Brown, David J.; Gasch, Caley K.; Brooks, Erin S.; Yourek, Matt A.

    2015-04-01

    In the Palouse region of eastern Washington and northern Idaho (USA), spatially discontinuous restrictive layers impede rooting growth and water infiltration. Consequently, accurate maps showing the depth and spatial extent of these restrictive layers are essential for watershed hydrologic modeling appropriate for precision agriculture. In this presentation, we report on the use of a Visible and Near-Infrared (VisNIR) penetrometer fore optic to construct detailed maps of three wheat fields in the Palouse region. The VisNIR penetrometer was used to deliver in situ soil reflectance to an Analytical Spectral Devices (ASD, Boulder, CO, USA) spectrometer and simultaneously acquire insertion force. With a hydraulic push-type soil coring systems for insertion (e.g. Giddings), we collected soil spectra and insertion force data along 41m x 41m grid points (2 fields) and 50m x 50m grid points (1 field) to ≈80cm depth, in addition to interrogation points at 36 representative instrumented locations per field. At each of the 36 instrumented locations, two soil cores were extracted for laboratory determination of clay content and bulk density. We developed calibration models of soil clay content and bulk density with spectra and insertion force collected in situ, using partial least squares regression 2 (PLSR2). Applying spline functions, we delineated clay and bulk density profiles at each points (grid and 24 locations). The soil profiles were then used as inputs in a regression-kriging model with terrain indexes and ECa data (derived from an EM38 field survey, Geonics, Mississauga, Ontario, Canada) as covariates to generate 3D soil maps. Preliminary results show that the VisNIR penetrometer can capture the spatial patterns of restrictive layers. Work is ongoing to evaluate the prediction accuracy of penetrometer-derived 3D clay content and restriction layer maps.

  3. Mapping the conformational free energy of aspartic acid in the gas phase and in aqueous solution.

    PubMed

    Comitani, Federico; Rossi, Kevin; Ceriotti, Michele; Sanz, M Eugenia; Molteni, Carla

    2017-04-14

    The conformational free energy landscape of aspartic acid, a proteogenic amino acid involved in a wide variety of biological functions, was investigated as an example of the complexity that multiple rotatable bonds produce even in relatively simple molecules. To efficiently explore such a landscape, this molecule was studied in the neutral and zwitterionic forms, in the gas phase and in water solution, by means of molecular dynamics and the enhanced sampling method metadynamics with classical force-fields. Multi-dimensional free energy landscapes were reduced to bi-dimensional maps through the non-linear dimensionality reduction algorithm sketch-map to identify the energetically stable conformers and their interconnection paths. Quantum chemical calculations were then performed on the minimum free energy structures. Our procedure returned the low energy conformations observed experimentally in the gas phase with rotational spectroscopy [M. E. Sanz et al., Phys. Chem. Chem. Phys. 12, 3573 (2010)]. Moreover, it provided information on higher energy conformers not accessible to experiments and on the conformers in water. The comparison between different force-fields and quantum chemical data highlighted the importance of the underlying potential energy surface to accurately capture energy rankings. The combination of force-field based metadynamics, sketch-map analysis, and quantum chemical calculations was able to produce an exhaustive conformational exploration in a range of significant free energies that complements the experimental data. Similar protocols can be applied to larger peptides with complex conformational landscapes and would greatly benefit from the next generation of accurate force-fields.

  4. A 2 Tesla Full Scale High Performance Periodic Permanent Magnet Model for Attractive (228 KN) and repulsive Maglev

    NASA Technical Reports Server (NTRS)

    Stekly, Z. J. J.; Gardner, C.; Domigan, P.; Baker, J.; Hass, M.; McDonald, C.; Wu, C.; Farrell, R. A.

    1996-01-01

    Two 214.5 cm. long high performance periodic (26 cm period) permanent magnet half-assemblies were designed and constructed for use as a wiggler using Nd-B-Fe and vanadium permendur as hard and soft magnetic materials by Field Effects, a division of Intermagnetics General Corporation. Placing these assemblies in a supporting structure with a 2.1 cm pole to pole separation resulted in a periodic field with a maximum value of 2.04 T. This is believed to be the highest field ever achieved by this type of device. The attractive force between the two 602 kg magnet assemblies is 228 kN, providing enough force for suspension of a 45,500 kg vehicle. If used in an attractive maglev system with an appropriate flat iron rail, one assembly will generate the same force with a gap of 1.05 cm leading to a lift to weight ratio of 38.6, not including the vehicle attachment structure. This permanent magnet compares well with superconducting systems which have lift to weight ratios in the range of 5 to 10. This paper describes the magnet assemblies and their measured magnetic performance. The measured magnetic field and resulting attractive magnetic force have a negative spring characteristic. Appropriate control coils are necessary to provide stable operation. The estimated performance of the assemblies in a stable repulsive mode, with eddy currents in a conducting guideway, is also discussed.

  5. Mapping the conformational free energy of aspartic acid in the gas phase and in aqueous solution

    NASA Astrophysics Data System (ADS)

    Comitani, Federico; Rossi, Kevin; Ceriotti, Michele; Sanz, M. Eugenia; Molteni, Carla

    2017-04-01

    The conformational free energy landscape of aspartic acid, a proteogenic amino acid involved in a wide variety of biological functions, was investigated as an example of the complexity that multiple rotatable bonds produce even in relatively simple molecules. To efficiently explore such a landscape, this molecule was studied in the neutral and zwitterionic forms, in the gas phase and in water solution, by means of molecular dynamics and the enhanced sampling method metadynamics with classical force-fields. Multi-dimensional free energy landscapes were reduced to bi-dimensional maps through the non-linear dimensionality reduction algorithm sketch-map to identify the energetically stable conformers and their interconnection paths. Quantum chemical calculations were then performed on the minimum free energy structures. Our procedure returned the low energy conformations observed experimentally in the gas phase with rotational spectroscopy [M. E. Sanz et al., Phys. Chem. Chem. Phys. 12, 3573 (2010)]. Moreover, it provided information on higher energy conformers not accessible to experiments and on the conformers in water. The comparison between different force-fields and quantum chemical data highlighted the importance of the underlying potential energy surface to accurately capture energy rankings. The combination of force-field based metadynamics, sketch-map analysis, and quantum chemical calculations was able to produce an exhaustive conformational exploration in a range of significant free energies that complements the experimental data. Similar protocols can be applied to larger peptides with complex conformational landscapes and would greatly benefit from the next generation of accurate force-fields.

  6. Molecular Dynamics Study of the Structure, Flexibility, and Hydrophilicity of PETIM Dendrimers: A Comparison with PAMAM Dendrimers.

    PubMed

    Kanchi, Subbarao; Suresh, Gorle; Priyakumar, U Deva; Ayappa, K G; Maiti, Prabal K

    2015-10-15

    A new class of dendrimers, the poly(propyl ether imine) (PETIM) dendrimer, has been shown to be a novel hyperbranched polymer having potential applications as a drug delivery vehicle. Structure and dynamics of the amine terminated PETIM dendrimer and their changes with respect to the dendrimer generation are poorly understood. Since most drugs are hydrophobic in nature, the extent of hydrophobicity of the dendrimer core is related to its drug encapsulation and retention efficacy. In this study, we carry out fully atomistic molecular dynamics (MD) simulations to characterize the structure of PETIM (G2-G6) dendrimers in salt solution as a function of dendrimer generation at different protonation levels. Structural properties such as radius of gyration (Rg), radial density distribution, aspect ratio, and asphericity are calculated. In order to assess the hydrophilicity of the dendrimer, we compute the number of bound water molecules in the interior of dendrimer as well as the number of dendrimer-water hydrogen bonds. We conclude that PETIM dendrimers have relatively greater hydrophobicity and flexibility when compared with their extensively investigated PAMAM counterparts. Hence PETIM dendrimers are expected to have stronger interactions with lipid membranes as well as improved drug encapsulation and retention properties when compared with PAMAM dendrimers. We compute the root-mean-square fluctuation of dendrimers as well as their entropy to quantify the flexibility of the dendrimer. Finally we note that structural and solvation properties computed using force field parameters derived based on the CHARMM general purpose force field were in good quantitative agreement with those obtained using the generalized Amber force field (GAFF).

  7. Quantum Correlations of Light from a Room-Temperature Mechanical Oscillator

    NASA Astrophysics Data System (ADS)

    Sudhir, V.; Schilling, R.; Fedorov, S. A.; Schütz, H.; Wilson, D. J.; Kippenberg, T. J.

    2017-07-01

    When an optical field is reflected from a compliant mirror, its intensity and phase become quantum-correlated due to radiation pressure. These correlations form a valuable resource: the mirror may be viewed as an effective Kerr medium generating squeezed states of light, or the correlations may be used to erase backaction from an interferometric measurement of the mirror's position. To date, optomechanical quantum correlations have been observed in only a handful of cryogenic experiments, owing to the challenge of distilling them from thermomechanical noise. Accessing them at room temperature, however, would significantly extend their practical impact, with applications ranging from gravitational wave detection to chip-scale accelerometry. Here, we observe broadband quantum correlations developed in an optical field due to its interaction with a room-temperature nanomechanical oscillator, taking advantage of its high-cooperativity near-field coupling to an optical microcavity. The correlations manifest as a reduction in the fluctuations of a rotated quadrature of the field, in a frequency window spanning more than an octave below mechanical resonance. This is due to coherent cancellation of the two sources of quantum noise contaminating the measured quadrature—backaction and imprecision. Supplanting the backaction force with an off-resonant test force, we demonstrate the working principle behind a quantum-enhanced "variational" force measurement.

  8. Instabilities of conducting fluid flows in cylindrical shells under external forcing

    NASA Astrophysics Data System (ADS)

    Burguete, Javier; Miranda, Montserrat

    2010-11-01

    Flows created in neutral conducting flows remain one of the less studied topics of fluid dynamics, in spite of their relevance both in fundamental research (dynamo action, turbulence suppression) and applications (continuous casting, aluminium production, biophysics). Here we present the effect of a time-dependent magnetic field parallel to the axis of circular cavities. Due to the Lenz's law, the time-dependent magnetic field generates an azymuthal current, that produces a radial force. This force produces the destabilization of the static fluid layer, and a flow is created. The geommetry of the experimental cell is a disc layer with external diameter smaller than 94 mm, with or without internal hole. The layer is up to 20mm depth, and we use as conducting fluid an In-Ga-Sn alloy. There is no external current applied on the problem, only an external magnetic field. This field evolves harmonically with a frequency up to 10Hz, small enough to not to observe skin depth effects. The magnitude ranges from 0 to 0.1 T. With a threshold of 0.01T a dynamical behaviour is observed, and the main characteristics of this flow have been determined: different temporal resonances and spatial patterns with differents symmetries (squares, hexagonal, triangles,...).

  9. Magnetotherapy: The quest for tendon regeneration.

    PubMed

    Pesqueira, Tamagno; Costa-Almeida, Raquel; Gomes, Manuela E

    2018-05-09

    Tendons are mechanosensitive tissues that connect and transmit the forces generated by muscles to bones by allowing the conversion of mechanical input into biochemical signals. These physical forces perform the fundamental work of preserving tendon homeostasis assuring body movements. However, overloading causes tissue injuries, which leads us to the field of tendon regeneration. Recently published reviews have broadly shown the use of biomaterials and different strategies to attain tendon regeneration. In this review, our focus is the use of magnetic fields as an alternative therapy, which has demonstrated clinical relevance in tendon medicine because of their ability to modulate cell fate. Yet the underlying cellular and molecular mechanisms still need to be elucidated. While providing a brief outlook about specific signalling pathways and intracellular messengers as framework in play by tendon cells, application of magnetic fields as a subcategory of physical forces is explored, opening up a compelling avenue to enhance tendon regeneration. We outline here useful insights on the effects of magnetic fields both at in vitro and in vivo levels, particularly on the expression of tendon genes and inflammatory cytokines, ultimately involved in tendon regeneration. Subsequently, the potential of using magnetically responsive biomaterials in tendon tissue engineering is highlighted and future directions in magnetotherapy are discussed. © 2018 Wiley Periodicals, Inc.

  10. A permanent magnet tubular linear generator for wave energy conversion

    NASA Astrophysics Data System (ADS)

    Yu, Haitao; Liu, Chunyuan; Yuan, Bang; Hu, Minqiang; Huang, Lei; Zhou, Shigui

    2012-04-01

    A novel three-phase permanent magnet tubular linear generator (PMTLG) with Halbach array is proposed for the sea wave energy conversion. Non-linear axi-symmetrical finite element method (FEM) is implemented to calculate the magnetic fields along air-gap for different Halbach arrays of PMTLGs. The PMTLG characteristics are analyzed and the simulation results are validated by the experiment. An assistant tooth is implemented to greatly minimize the end and cogging effects which cause the oscillatory detent force.

  11. Numerical Simulation of Flow in the Chamber of the Water-Argon Plasma Generator

    NASA Astrophysics Data System (ADS)

    Hlbočan, Peter; Varchola, Michal; Knížat, Branislav; Mlkvik, Marek; Olšiak, Róbert

    2012-12-01

    The paper describes the CFD simulation of the flow of gas and plasma in a plasma generator with a hybrid stabilization of the electric arc. The momentum equations of the model also take Lorentz forces into account. In the energy equation, Joule heat is introduced as an energy source. The introduction of boundary conditions is also explained, as along with plasma transport properties and a method of solution. The paper presents selected results of pressure and velocity fields in the chamber of the plasma generator.

  12. Development of Magnetorheological Resistive Exercise Device for Rowing Machine

    PubMed Central

    Žiliukas, Pranas

    2016-01-01

    Training equipment used by professional sportsmen has a great impact on their sport performance. Most universal exercisers may help only to improve the general physical condition due to the specific kinematics and peculiar resistance generated by their loading units. Training of effective techniques and learning of psychomotor skills are possible only when exercisers conform to the movements and resistance typical for particular sports kinematically and dynamically. Methodology of developing a magnetorheological resistive exercise device for generating the desired law of passive resistance force and its application in a lever-type rowing machine are described in the paper. The structural parameters of a controllable hydraulic cylinder type device were found by means of the computational fluid dynamics simulation performed by ANSYS CFX software. Parameters describing the magnetorheological fluid as non-Newtonian were determined by combining numerical and experimental research of the resistance force generated by the original magnetorheological damper. A structural scheme of the device control system was developed and the variation of the strength of magnetic field that affects the magnetorheological fluid circulating in the device was determined, ensuring a variation of the resistance force on the oar handle adequate for the resistance that occurs during a real boat rowing stroke. PMID:27293479

  13. Development of Magnetorheological Resistive Exercise Device for Rowing Machine.

    PubMed

    Grigas, Vytautas; Šulginas, Anatolijus; Žiliukas, Pranas

    2015-01-01

    Training equipment used by professional sportsmen has a great impact on their sport performance. Most universal exercisers may help only to improve the general physical condition due to the specific kinematics and peculiar resistance generated by their loading units. Training of effective techniques and learning of psychomotor skills are possible only when exercisers conform to the movements and resistance typical for particular sports kinematically and dynamically. Methodology of developing a magnetorheological resistive exercise device for generating the desired law of passive resistance force and its application in a lever-type rowing machine are described in the paper. The structural parameters of a controllable hydraulic cylinder type device were found by means of the computational fluid dynamics simulation performed by ANSYS CFX software. Parameters describing the magnetorheological fluid as non-Newtonian were determined by combining numerical and experimental research of the resistance force generated by the original magnetorheological damper. A structural scheme of the device control system was developed and the variation of the strength of magnetic field that affects the magnetorheological fluid circulating in the device was determined, ensuring a variation of the resistance force on the oar handle adequate for the resistance that occurs during a real boat rowing stroke.

  14. Plasma sweeper to control the coupling of RF power to a magnetically confined plasma

    DOEpatents

    Motley, Robert W.; Glanz, James

    1985-01-01

    A device for coupling RF power (a plasma sweeper) from a phased waveguide array for introducing RF power to a plasma having a magnetic field associated therewith comprises at least one electrode positioned near the plasma and near the phased waveguide array; and a potential source coupled to the electrode for generating a static electric field at the electrode directed into the plasma and having a component substantially perpendicular to the plasma magnetic field such that a non-zero vector cross-product of the electric and magnetic fields exerts a force on the plasma causing the plasma to drift.

  15. Finite-element 3D simulation tools for high-current relativistic electron beams

    NASA Astrophysics Data System (ADS)

    Humphries, Stanley; Ekdahl, Carl

    2002-08-01

    The DARHT second-axis injector is a challenge for computer simulations. Electrons are subject to strong beam-generated forces. The fields are fully three-dimensional and accurate calculations at surfaces are critical. We describe methods applied in OmniTrak, a 3D finite-element code suite that can address DARHT and the full range of charged-particle devices. The system handles mesh generation, electrostatics, magnetostatics and self-consistent particle orbits. The MetaMesh program generates meshes of conformal hexahedrons to fit any user geometry. The code has the unique ability to create structured conformal meshes with cubic logic. Organized meshes offer advantages in speed and memory utilization in the orbit and field solutions. OmniTrak is a versatile charged-particle code that handles 3D electric and magnetic field solutions on independent meshes. The program can update both 3D field solutions from the calculated beam space-charge and current-density. We shall describe numerical methods for orbit tracking on a hexahedron mesh. Topics include: 1) identification of elements along the particle trajectory, 2) fast searches and adaptive field calculations, 3) interpolation methods to terminate orbits on material surfaces, 4) automatic particle generation on multiple emission surfaces to model space-charge-limited emission and field emission, 5) flexible Child law algorithms, 6) implementation of the dual potential model for 3D magnetostatics, and 7) assignment of charge and current from model particle orbits for self-consistent fields.

  16. Finite element analysis and performance study of switched reluctance generator

    NASA Astrophysics Data System (ADS)

    Zhang, Qianhan; Guo, Yingjun; Xu, Qi; Yu, Xiaoying; Guo, Yajie

    2017-03-01

    Analyses a three-phase 12/8 switched reluctance generator (SRG) which is based on its structure and performance principle. The initial size data were calculated by MathCAD, and the simulation model was set up in the ANSOFT software environment with the maximum efficiency and the maximum output power as the main reference parameters. The outer diameter of the stator and the inner diameter of the rotor were parameterized. The static magnetic field distribution, magnetic flux, magnetic energy, torque, inductance characteristics, back electromotive force and phase current waveform of SRG is obtained by analyzing the static magnetic field and the steady state motion of two-dimensional transient magnetic field in ANSOFT environment. Finally, the experimental data of the prototype are compared with the simulation results, which provide a reliable basis for the design and research of SRG wind turbine system.

  17. Generating a stationary infinite range tractor force via a multimode optical fibre

    NASA Astrophysics Data System (ADS)

    Ebongue, C. A.; Holzmann, D.; Ostermann, S.; Ritsch, H.

    2017-06-01

    Optical fibres confine and guide light almost unattenuated and thus convey light forces to polarizable nano-particles over very long distances. Radiation pressure forces arise from scattering of guided photons into free space while gradient forces are based on coherent scattering between different fibre modes or propagation directions. Interestingly, even scattering between co-propagating modes induces longitudinal forces as the transverse confinement of the light modes creates mode dependent longitudinal wave-vectors and photon momenta. We generalize a proven scattering matrix based approach to calculate single as well as inter-particle forces to include several forward and backward propagating modes. We show that an injection of the higher order mode only in a two mode fibre will induce a stationary tractor force against the injection direction, when the mode coupling to the lower order mode dominates against backscattering and free space losses. Generically this arises for non-absorbing particles at the centre of a waveguide. The model also gives improved predictions for inter-particle forces in evanescent nanofibre fields as experimentally observed recently. Surprisingly strong tractor forces can also act on whole optically bound arrays.

  18. Remote sensing of the correlation between breakpoint oscillations and infragravity waves in the surf and swash zone

    NASA Astrophysics Data System (ADS)

    Moura, T.; Baldock, T. E.

    2017-04-01

    A novel remote sensing methodology to determine the dominant infragravity mechanism in the inner surf and swash zone in the field is presented. Video observations of the breakpoint motion are correlated with the shoreline motion and inner surf zone water levels to determine the relationship between the time-varying breakpoint oscillations and the shoreline motion. The results of 13 field data sets collected from three different beaches indicate that, inside the surf zone, the dominance of bound wave or breakpoint forcing is strongly dependent on the surf zone width and the type of short wave breaking. Infragravity generation by bound wave release was stronger for conditions with relatively narrow surf zones and plunging waves; breakpoint forcing was dominant for wider surf zones and spilling breaker conditions.

  19. Magnetic force microscopy study on wide adjacent track erasure in perpendicular magnetic write heads

    NASA Astrophysics Data System (ADS)

    Ruksasakchai, P.; Saengkaew, K.; Cheowanish, I.; Damrongsak, B.

    2017-09-01

    We used a phase-contrast magnetic force microscopy (MFM) to observe and analyze the failure of magnetic write heads due to the WATEr problem, which limits the off-track performance. During MFM imaging, the magnetic write head was energized by a DC current. The induced out-of-plane magnetic field was then detected by scanning a MFM probe across the surface of the magnetic write head. MFM images were then mapped with WATEr measured results from a spin stand method. Results showed that WATEr effect can be generated by several factors, i.e. the structure of magnetic domains and walls from material discontinuities and the magnetic field leakage at different locations on magnetic write heads. Understanding WATEr mechanisms is useful for design and process development engineers.

  20. Electrically induced formation of uncapped, hollow polymeric microstructures

    NASA Astrophysics Data System (ADS)

    Lee, Sung Hun; Kim, Pilnam; Jeong, Hoon Eui; Suh, Kahp Y.

    2006-11-01

    Uncapped, hollow polymeric microstructures were fabricated on a silicon substrate using electric field induced stretching and detachment. Initially, square or cylinder microposts were generated using a solvent-assisted capillary molding technique, and a featureless electrode mask was positioned on the top of the microstructure with spacers maintaining an air gap (~20 µm). Upon exposure to an external electric field (1.0-3.0 V µm-1), the hollow microstructures were destabilized and stretched by the well-known electrohydrodynamic instability, resulting in contact of the top polymer surface with the mask. Subsequently, detachment of the capping layer occurred upon removal of the mask due to larger adhesion forces at the polymer/mask interface than cohesion forces of the polymer. These hollow microstructures were tested to capture the budding yeast, Saccharomyces cerevisiae, for shear protection.

  1. Motion Driven by Strain Gradient Fields

    PubMed Central

    Wang, Chao; Chen, Shaohua

    2015-01-01

    A new driving mechanism for direction-controlled motion of nano-scale objects is proposed, based on a model of stretching a graphene strip linked to a rigid base with linear springs of identical stiffness. We find that the potential energy difference induced by the strain gradient field in the graphene strip substrate can generate sufficient force to overcome the static and kinetic friction forces between the nano-flake and the strip substrate, resulting in the nanoscale flake motion in the direction of gradient reduction. The dynamics of the nano-flake can be manipulated by tuning the stiffness of linear springs, stretching velocity and the flake size. This fundamental law of directional motion induced by strain gradient could be very useful for promising designs of nanoscale manipulation, transportation and smart surfaces. PMID:26323603

  2. Limitations to photosynthesis by proton motive force-induced photosystem II photodamage

    PubMed Central

    Davis, Geoffry A; Kanazawa, Atsuko; Schöttler, Mark Aurel; Kohzuma, Kaori; Froehlich, John E; Rutherford, A William; Satoh-Cruz, Mio; Minhas, Deepika; Tietz, Stefanie; Dhingra, Amit; Kramer, David M

    2016-01-01

    The thylakoid proton motive force (pmf) generated during photosynthesis is the essential driving force for ATP production; it is also a central regulator of light capture and electron transfer. We investigated the effects of elevated pmf on photosynthesis in a library of Arabidopsis thaliana mutants with altered rates of thylakoid lumen proton efflux, leading to a range of steady-state pmf extents. We observed the expected pmf-dependent alterations in photosynthetic regulation, but also strong effects on the rate of photosystem II (PSII) photodamage. Detailed analyses indicate this effect is related to an elevated electric field (Δψ) component of the pmf, rather than lumen acidification, which in vivo increased PSII charge recombination rates, producing singlet oxygen and subsequent photodamage. The effects are seen even in wild type plants, especially under fluctuating illumination, suggesting that Δψ-induced photodamage represents a previously unrecognized limiting factor for plant productivity under dynamic environmental conditions seen in the field. DOI: http://dx.doi.org/10.7554/eLife.16921.001 PMID:27697149

  3. Limitations to photosynthesis by proton motive force-induced photosystem II photodamage

    DOE PAGES

    Davis, Geoffry A.; Kanazawa, Atsuko; Schöttler, Mark Aurel; ...

    2016-10-04

    The thylakoid proton motive force (pmf) generated during photosynthesis is the essential driving force for ATP production; it is also a central regulator of light capture and electron transfer. We investigated the effects of elevated pmf on photosynthesis in a library of Arabidopsis thaliana mutants with altered rates of thylakoid lumen proton efflux, leading to a range of steady-state pmf extents. We observed the expected pmf-dependent alterations in photosynthetic regulation, but also strong effects on the rate of photosystem II (PSII) photodamage. Detailed analyses indicate this effect is related to an elevated electric field (Δψ) component of the pmf, rathermore » than lumen acidification, which in vivo increased PSII charge recombination rates, producing singlet oxygen and subsequent photodamage. The effects are seen even in wild type plants, especially under fluctuating illumination, suggesting that Δψ-induced photodamage represents a previously unrecognized limiting factor for plant productivity under dynamic environmental conditions seen in the field.« less

  4. Forcing function modeling for flow induced vibration

    NASA Technical Reports Server (NTRS)

    Fleeter, Sanford

    1993-01-01

    The fundamental forcing function unsteady aerodynamics for application to turbomachine blade row forced response are considered, accomplished through a series of experiments performed in a rotating annular cascade and a research axial flow turbine. In particular, the unsteady periodic flowfields downstream of rotating rows of perforated plates, airfoils and turbine blade rows are measured with a cross hot-wire and an unsteady total pressure probe. The unsteady velocity and static pressure fields were then analyzed harmonically and split into vortical and potential gusts, accomplished by developing a gust splitting analysis which includes both gust unsteady static pressure and velocity data. The perforated plate gusts closely were found to be linear theory vortical gusts, satisfying the vortical gust constraints. The airfoil and turbine blade row generated velocity perturbations did not satisfy the vortical gust constraints. However, the decomposition of the unsteady flow field separated the data into a propagating vortical component which satisfied these vortical gust constraints and a decaying potential component.

  5. Determination of Coronal Magnetic Fields from Vector Magnetograms

    NASA Technical Reports Server (NTRS)

    Mikic, Zoran

    1997-01-01

    During the course of the present contract we developed an 'evolutionary technique' for the determination of force-free coronal magnetic fields from vector magnetograph observations. The method can successfully generate nonlinear force- free fields (with non-constant-a) that match vector magnetograms. We demonstrated that it is possible to determine coronal magnetic fields from photospheric measurements, and we applied it to vector magnetograms of active regions. We have also studied theoretical models of coronal fields that lead to disruptions. Specifically, we have demonstrated that the determination of force-free fields from exact boundary data is a well-posed mathematical problem, by verifying that the computed coronal field agrees with an analytic force-free field when boundary data for the analytic field are used; demonstrated that it is possible to determine active-region coronal magnetic fields from photospheric measurements, by computing the coronal field above active region 5747 on 20 October 1989, AR6919 on 15 November 1991, and AR7260 on 18 August 1992, from data taken with the Stokes Polarimeter at Mees Solar Observatory, University of Hawaii; started to analyze active region 7201 on 19 June 1992 using measurements made with the Advanced Stokes Polarimeter at NSO/Sac Peak; investigated the effects of imperfections in the photospheric data on the computed coronal magnetic field; documented the coronal field structure of AR5747 and compared it to the morphology of footpoint emission in a flare, showing that the 'high- pressure' H-alpha footpoints are connected by coronal field lines; shown that the variation of magnetic field strength along current-carrying field lines is significantly different from the variation in a potential field, and that the resulting near-constant area of elementary flux tubes is consistent with observations; begun to develop realistic models of coronal fields which can be used to study flare trigger mechanisms; demonstrated that magnetic nonequilibrium can disrupt sheared coronal arcades, and that helmet streamers can disrupt, leading to coronal mass ejections. Our model has significantly extended the realism with which the coronal magnetic field can be inferred from actual observations. In a subsequent contract awarded by NASA, we have continued to apply and improve the evolutionary technique, to study the physical properties of active regions, and to develop theoretical models of magnetic fields.

  6. Current Status of Protein Force Fields for Molecular Dynamics

    PubMed Central

    Lopes, Pedro E.M.; Guvench, Olgun

    2015-01-01

    Summary The current status of classical force fields for proteins is reviewed. These include additive force fields as well as the latest developments in the Drude and AMOEBA polarizable force fields. Parametrization strategies developed specifically for the Drude force field are described and compared with the additive CHARMM36 force field. Results from molecular simulations of proteins and small peptides are summarized to illustrate the performance of the Drude and AMOEBA force fields. PMID:25330958

  7. Identification of wind fields for wave modeling near Qatar

    NASA Astrophysics Data System (ADS)

    Nayak, Sashikant; Balan Sobhana, Sandeepan; Panchang, Vijay

    2016-04-01

    Due to the development of coastal and offshore infrastructure in and around the Arabian Gulf, a large semi-enclosed sea, knowledge of met-ocean factors like prevailing wind systems, wind generated waves, and currents etc. are of great importance. Primarily it is important to identify the wind fields that are used as forcing functions for wave and circulation models for hindcasting and forecasting purposes. The present study investigates the effects of using two sources of wind-fields on the modeling of wind-waves in the Arabian Gulf, in particular near the coastal regions of Qatar. Two wind sources are considered here, those obtained from ECMWF and those generated by us using the WRF model. The wave model SWAN was first forced with the 6 hourly ERA Interim daily winds (from ECMWF) having spatial resolution of 0.125°. For the second option, wind fields were generated by us using the mesoscale wind model (WRF) with a high spatial resolution (0.1°) at every 30 minute intervals. The simulations were carried out for a period of two months (7th October-7th December, 2015) during which measurements were available from two moored buoys (deployed and operated by the Qatar Meteorological Department), one in the north of Qatar ("Qatar North", in water depth of 58.7 m) and other in the south ("Shiraouh Island", in water depth of 16.64 m). This period included a high-sea event on 11-12th of October, recorded by the two buoys where the significant wave heights (Hs) reached as high as 2.9 m (i.e. max wave height H ~ 5.22 m) and 1.9 (max wave height H ~ 3.4 m) respectively. Model results were compared with the data for this period. The scatter index (SI) of the Hs simulated using the WRF wind fields and the observed Hs was found to be about 30% and 32% for the two buoys (total period). The observed Hs were generally reproduced but there was consistent underestimation. (Maximum 27% for the high-sea event). For the Hs obtained with ERA interim wind fields, the underestimation was of the order of 50% (on average) for the entire duration. The study therefore suggests the use of a mesoscale weather forecasting model such as WRF, for deriving the wind fields for a large but marginal semi-enclosed sea where small scale phenomena dominate, and when used as forcing in the wave model, it provides wave-climate predictions with less error.

  8. Trapping force and optical lifting under focused evanescent wave illumination.

    PubMed

    Ganic, Djenan; Gan, Xiaosong; Gu, Min

    2004-11-01

    A physical model is presented to understand and calculate trapping force exerted on a dielectric micro-particle under focused evanescent wave illumination. This model is based on our recent vectorial diffraction model by a high numerical aperture objective operating under the total internal condition. As a result, trapping force in a focused evanescent spot generated by both plane wave (TEM00) and doughnut beam (TEM*01) illumination is calculated, showing an agreement with the measured results. It is also revealed by this model that unlike optical trapping in the far-field region, optical axial trapping force in an evanescent focal spot increases linearly with the size of a trapped particle. This prediction shows that it is possible to overcome the force of gravity to lift a polystyrene particle of up to 800 nm in radius with a laser beam of power 10 microW.

  9. On the glitches in the force transmitted by an electrodynamic exciter to a structure

    NASA Technical Reports Server (NTRS)

    Rao, Dantam K.

    1987-01-01

    Around resonance, the force transmitted by an exciter into a structure will be smaller or greater than a reference force generated by its coils due to electromechanical interaction. A simple analysis is presented which reveals how this phenomenon of force drop-off is controlled by three factors. The first factor, called Armature Mass Factor, describes a purely mechanical interaction between the structure and the exciter. The electromechanical energy conversion and its interaction with the structure yields two additional factors, called Electrical Resistance and Electrical Inductance Factors. They describe the effects of coil resistance, inductance and magnetic field strength relative to structural damping and stiffness. Present analysis indicates that, under proper circumstances, more than 90 percent of the force drop-off can be eliminated if armature-to-structure mass ratio is smaller or equal to half of modal loss factor.

  10. Double-layer rotor magnetic shield performance analysis in high temperature superconducting synchronous generators under short circuit fault conditions

    NASA Astrophysics Data System (ADS)

    Hekmati, Arsalan; Aliahmadi, Mehdi

    2016-12-01

    High temperature superconducting, HTS, synchronous machines benefit from a rotor magnetic shield in order to protect superconducting coils against asynchronous magnetic fields. This magnetic shield, however, suffers from exerted Lorentz forces generated in light of induced eddy currents during transient conditions, e.g. stator windings short-circuit fault. In addition, to the exerted electromagnetic forces, eddy current losses and the associated effects on the cryogenic system are the other consequences of shielding HTS coils. This study aims at investigating the Rotor Magnetic Shield, RMS, performance in HTS synchronous generators under stator winding short-circuit fault conditions. The induced eddy currents in different circumferential positions of the rotor magnetic shield along with associated Joule heating losses would be studied using 2-D time-stepping Finite Element Analysis, FEA. The investigation of Lorentz forces exerted on the magnetic shield during transient conditions has also been performed in this paper. The obtained results show that double line-to-ground fault is of the most importance among different types of short-circuit faults. It was revealed that when it comes to the design of the rotor magnetic shields, in addition to the eddy current distribution and the associated ohmic losses, two phase-to-ground fault should be taken into account since the produced electromagnetic forces in the time of fault conditions are more severe during double line-to-ground fault.

  11. A method to encapsulate model structural uncertainty in ensemble projections of future climate: EPIC v1.0

    NASA Astrophysics Data System (ADS)

    Lewis, Jared; Bodeker, Greg E.; Kremser, Stefanie; Tait, Andrew

    2017-12-01

    A method, based on climate pattern scaling, has been developed to expand a small number of projections of fields of a selected climate variable (X) into an ensemble that encapsulates a wide range of indicative model structural uncertainties. The method described in this paper is referred to as the Ensemble Projections Incorporating Climate model uncertainty (EPIC) method. Each ensemble member is constructed by adding contributions from (1) a climatology derived from observations that represents the time-invariant part of the signal; (2) a contribution from forced changes in X, where those changes can be statistically related to changes in global mean surface temperature (Tglobal); and (3) a contribution from unforced variability that is generated by a stochastic weather generator. The patterns of unforced variability are also allowed to respond to changes in Tglobal. The statistical relationships between changes in X (and its patterns of variability) and Tglobal are obtained in a training phase. Then, in an implementation phase, 190 simulations of Tglobal are generated using a simple climate model tuned to emulate 19 different global climate models (GCMs) and 10 different carbon cycle models. Using the generated Tglobal time series and the correlation between the forced changes in X and Tglobal, obtained in the training phase, the forced change in the X field can be generated many times using Monte Carlo analysis. A stochastic weather generator is used to generate realistic representations of weather which include spatial coherence. Because GCMs and regional climate models (RCMs) are less likely to correctly represent unforced variability compared to observations, the stochastic weather generator takes as input measures of variability derived from observations, but also responds to forced changes in climate in a way that is consistent with the RCM projections. This approach to generating a large ensemble of projections is many orders of magnitude more computationally efficient than running multiple GCM or RCM simulations. Such a large ensemble of projections permits a description of a probability density function (PDF) of future climate states rather than a small number of individual story lines within that PDF, which may not be representative of the PDF as a whole; the EPIC method largely corrects for such potential sampling biases. The method is useful for providing projections of changes in climate to users wishing to investigate the impacts and implications of climate change in a probabilistic way. A web-based tool, using the EPIC method to provide probabilistic projections of changes in daily maximum and minimum temperatures for New Zealand, has been developed and is described in this paper.

  12. Acoustic radiation force control: Pulsating spherical carriers.

    PubMed

    Rajabi, Majid; Mojahed, Alireza

    2018-02-01

    The interaction between harmonic plane progressive acoustic beams and a pulsating spherical radiator is studied. The acoustic radiation force function exerted on the spherical body is derived as a function of the incident wave pressure and the monopole vibration characteristics (i.e., amplitude and phase) of the body. Two distinct strategies are presented in order to alter the radiation force effects (i.e., pushing and pulling states) by changing its magnitude and direction. In the first strategy, an incident wave field with known amplitude and phase is considered. It is analytically shown that the zero- radiation force state (i.e., radiation force function cancellation) is achievable for specific pulsation characteristics belong to a frequency-dependent straight line equation in the plane of real-imaginary components (i.e., Nyquist Plane) of prescribed surface displacement. It is illustrated that these characteristic lines divide the mentioned displacement plane into two regions of positive (i.e., pushing) and negative (i.e., pulling) radiation forces. In the second strategy, the zero, negative and positive states of radiation force are obtained through adjusting the incident wave field characteristics (i.e., amplitude and phase) which insonifies the radiator with prescribed pulsation characteristics. It is proved that zero radiation force state occurs for incident wave pressure characteristics belong to specific frequency-dependent circles in Nyquist plane of incident wave pressure. These characteristic circles divide the Nyquist plane into two distinct regions corresponding to positive (out of circles) and negative (in the circles) values of radiation force function. It is analytically shown that the maximum amplitude of negative radiation force is exactly equal to the amplitude of the (positive) radiation force exerted upon the sphere in the passive state, by the same incident field. The developed concepts are much more deepened by considering the required power supply for distinct cases of zero, negative and positive radiation force states along with the frequency dependent asymmetry index. In addition, considering the effect of phase difference between the incident wave field and the pulsating object, and its possible variation with respect to spatial position of object, some practical points about the spatial average of generated radiation force, the optimal state of operation, the stability of zero radiation force states and the possibly of precise motion control are discussed. This work would extend the novel concept of smart carriers to and may be helpful for robust single-beam acoustic handling techniques. Furthermore, the shown capability of precise motion control may be considered as a new way toward smart acoustic driven micro-mechanisms and micro-machines. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. Force Control Characteristics for Generation and Relaxation in the Lower Limb.

    PubMed

    Ohtaka, Chiaki; Fujiwara, Motoko

    2018-05-29

    We investigated the characteristics for force generation and relaxation using graded isometric contractions of the knee extensors. Participants performed the following tasks as quickly and accurately as possible. For the force generation task, force was increased from 0% to 20%, 40% and 60% of the maximal voluntary force (MVF). For the force relaxation task, force was decreased from 60% to 40%, 20% and 0%. The following parameters of the recorded force were calculated: error, time, and rate of force development. The error was consistently greater for force relaxation than generation. Reaction and adjustment times were independent of the tasks. The control strategy was markedly different for force relaxation and generation, this tendency was particularly evident for the lower limb compared to the upper limb.

  14. Optical detection of ultrasound using an apertureless near-field scanning optical microscopy system

    NASA Astrophysics Data System (ADS)

    Ahn, Phillip; Zhang, Zhen; Sun, Cheng; Balogun, Oluwaseyi

    2013-01-01

    Laser ultrasonics techniques are power approaches for non-contact generation and detection of high frequency ultrasound on a local scale. In these techniques, optical diffraction limits the spatial information that can be accessed from a measurement. In order to improve the lateral spatial resolution, we incorporate an apertureless near-field scanning optical microscope (aNSOM) into laser ultrasonics setup for local detection of laser generated ultrasound. The aNSOM technique relies on the measurement of a weak backscattered near-field light intensity resulting from the oblique illumination of a nanoscale probe-tip positioned close to a sample surface. We enhance the optical near-field intensity by coupling light to surface plasmon polaritons (SPPs) on the shaft of an atomic force microscopy (AFM) cantilever. The SPPs propagate down the AFM shaft, localize at the tip apex, and are backscattered to the far-field when the separation distance between the probe tip and the sample surface is comparable to the probe-tip radius. The backscattered near-field intensity is dynamically modulated when an ultrasonic wave arrives at the sample surface leading to a transient change in the tip-sample separation distance. We present experimental results detailing measurement of broadband and narrowband laser generated ultrasound in solids with frequencies reaching up to 180 MHz range.

  15. Evidence from numerical experiments for a feedback dynamo generating Mercury's magnetic field.

    PubMed

    Heyner, Daniel; Wicht, Johannes; Gómez-Pérez, Natalia; Schmitt, Dieter; Auster, Hans-Ulrich; Glassmeier, Karl-Heinz

    2011-12-23

    The observed weakness of Mercury's magnetic field poses a long-standing puzzle to dynamo theory. Using numerical dynamo simulations, we show that it could be explained by a negative feedback between the magnetospheric and the internal magnetic fields. Without feedback, a small internal field was amplified by the dynamo process up to Earth-like values. With feedback, the field strength saturated at a much lower level, compatible with the observations at Mercury. The classical saturation mechanism via the Lorentz force was replaced by the external field impact. The resulting surface field was dominated by uneven harmonic components. This will allow the feedback model to be distinguished from other models once a more accurate field model is constructed from MErcury Surface, Space ENvironment, GEochemistry, and Ranging (MESSENGER) and BepiColombo data.

  16. Improving Precipitation Forcings for the National Water Model

    NASA Astrophysics Data System (ADS)

    Fall, G. M.; Zhang, Z.; Miller, D.; Kitzmiller, D.; Patrick, N.; Sparrow, K.; Olheiser, C.; Szeliga, T.

    2017-12-01

    The National Weather Service's Office of Water Prediction (NWS/OWP) produces operational hydrologic products, many of which are generated by the National Water Model (NWM). NWM analysis cycles (also known as "near-real-time" or "update" cycles) are of key importance, since the land surface states and fluxes they produce are used to initialize all forecast cycles. Among all forcing fields (which include precipitation, temperature, humidity, radiation, and wind), precipitation is particularly important. Currently, NWM precipitation forcings for analysis cycles are generated by combining hourly radar-derived precipitation products from the Multi-Radar, Multi-Sensor (MRMS) system with short-term quantitative precipitation forecasts (QPF) from the Rapid Refresh (RAP) and High Resolution Rapid Refresh (HRRR) systems. Short term QPF is used in analysis cycles to fill coverage gaps in MRMS products, and its inclusion is necessary due to the short latency associated with NWM analysis cycles relative to the availability of other operational precipitation analyses. This presentation will describe the methodology used to remove QPF bias and to spatially merge MRMS, HRRR, and RAP into hourly forcing inputs for NWM version 2.0, expected to enter into operations in late 2018. The accuracy of version 2.0 precipitation forcings relative to reference data sources, and the degree to which these forcings will represent an improvement over those used to drive the previous NWM version (1.2), will be described.

  17. Rotor-generated unsteady aerodynamic interactions in a 1½ stage compressor

    NASA Astrophysics Data System (ADS)

    Papalia, John J.

    Because High Cycle Fatigue (HCF) remains the predominant surprise failure mode in gas turbine engines, HCF avoidance design systems are utilized to identify possible failures early in the engine development process. A key requirement of these analyses is accurate determination of the aerodynamic forcing function and corresponding airfoil unsteady response. The current study expands the limited experimental database of blade row interactions necessary for calibration of predictive HCF analyses, with transonic axial-flow compressors of particular interest due to the presence of rotor leading edge shocks. The majority of HCF failures in aircraft engines occur at off-design operating conditions. Therefore, experiments focused on rotor-IGV interactions at off-design are conducted in the Purdue Transonic Research Compressor. The rotor-generated IGV unsteady aerodynamics are quantified when the IGV reset angle causes the vane trailing edge to be nearly aligned with the rotor leading edge shocks. A significant vane response to the impulsive static pressure perturbation associated with a shock is evident in the point measurements at 90% span, with details of this complex interaction revealed in the corresponding time-variant vane-to-vane flow field data. Industry wide implementation of Controlled Diffusion Airfoils (CDA) in modern compressors motivated an investigation of upstream propagating CDA rotor-generated forcing functions. Whole field velocity measurements in the reconfigured Purdue Transonic Research Compressor along the design speedline reveal steady loading had a considerable effect on the rotor shock structure. A detached rotor leading edge shock exists at low loading, with an attached leading edge and mid-chord suction surface normal shock present at nominal loading. These CDA forcing functions are 3--4 times smaller than those generated by the baseline NACA 65 rotor at their respective operating points. However, the IGV unsteady aerodynamic response to the CDA forcing functions remains significant. The intra-vane transport of NACA 65 and CDA rotor wakes is also observed within the time-variant passage velocity data. In general, the wake width and decay rate increase with rotor speed and compressor steady loading respectively.

  18. Generic effective source for scalar self-force calculations

    NASA Astrophysics Data System (ADS)

    Wardell, Barry; Vega, Ian; Thornburg, Jonathan; Diener, Peter

    2012-05-01

    A leading approach to the modeling of extreme mass ratio inspirals involves the treatment of the smaller mass as a point particle and the computation of a regularized self-force acting on that particle. In turn, this computation requires knowledge of the regularized retarded field generated by the particle. A direct calculation of this regularized field may be achieved by replacing the point particle with an effective source and solving directly a wave equation for the regularized field. This has the advantage that all quantities are finite and require no further regularization. In this work, we present a method for computing an effective source which is finite and continuous everywhere, and which is valid for a scalar point particle in arbitrary geodesic motion in an arbitrary background spacetime. We explain in detail various technical and practical considerations that underlie its use in several numerical self-force calculations. We consider as examples the cases of a particle in a circular orbit about Schwarzschild and Kerr black holes, and also the case of a particle following a generic timelike geodesic about a highly spinning Kerr black hole. We provide numerical C code for computing an effective source for various orbital configurations about Schwarzschild and Kerr black holes.

  19. Traction force and tension fluctuations in growing axons

    NASA Astrophysics Data System (ADS)

    Urbach, Jeffrey; Polackwich, Jamie; Koch, Daniel; McAllister, Ryan; Geller, Herbert

    Actively generated mechanical forces play a central role in axon growth and guidance during nervous system development. We describe the dynamics of traction stresses from growth cones of actively advancing axons from postnatal rat DRG neurons. By tracking the movement of the growth cone and analyzing the traction stresses in a co-moving reference frame, we show that there is a clear and consistent average stress field underlying the complex spatial stresses present at any one time. The average stress field has strong maxima on the sides of the growth cone, directed inward toward the growth cone neck. This pattern represents a Contractile stress contained within the growth cone, and a net force that is balanced by the axon tension. In addition, using high time-resolution measurements, we show that the stress field is composed of fluctuating local stress peaks, with a population of peaks whose lifetime distribution follows an exponential decay, and a small number of very long-lived peaks. We also find that the tension appears to vary randomly over short time scales, roughly consistent with the lifetime of the stress peaks, suggesting that the tension fluctuations originate from stochastic adhesion dynamics.

  20. A Combined Experimental/Computational Study of Flow in Turbine Blade Cooling Passage

    NASA Technical Reports Server (NTRS)

    Tse, D. G. N.; Kreskovsky, J. P.; Shamroth, S. J.; Mcgrath, D. B.

    1994-01-01

    Laser velocimetry was utilized to map the velocity field in a serpentine turbine blade cooling passage at Reynolds and Rotation numbers of up to 25.000 and 0.48. These results were used to assess the combined influence of passage curvature and Coriolis force on the secondary velocity field generated. A Navier-Stokes code (NASTAR) was validated against incompressible test data and then used to simulate the effect of buoyancy. The measurements show a net convection from the low pressure surface to high pressure surface. The interaction of the secondary flows induced by the turns and rotation produces swirl at the turns, which persisted beyond 2 hydraulic diameters downstream of the turns. The incompressible flow field predictions agree well with the measured velocities. With radially outward flow, the buoyancy force causes a further increase in velocity on the high pressure surface and a reduction on the low pressure surface. The results were analyzed in relation to the heat transfer measurements of Wagner et al. (1991). Predicted heat transfer is enhanced on the high pressure surfaces and in turns. The incompressible flow simulation underpredicts heat transfer in these locations. Improvements observed in compressible flow simulation indicate that the buoyancy force may be important.

  1. Disaggregation and separation dynamics of magnetic particles in a microfluidic flow under an alternating gradient magnetic field

    NASA Astrophysics Data System (ADS)

    Cao, Quanliang; Li, Zhenhao; Wang, Zhen; Qi, Fan; Han, Xiaotao

    2018-05-01

    How to prevent particle aggregation in the magnetic separation process is of great importance for high-purity separation, while it is a challenging issue in practice. In this work, we report a novel method to solve this problem for improving the selectivity of size-based separation by use of a gradient alternating magnetic field. The specially designed magnetic field is capable of dynamically adjusting the magnetic field direction without changing the direction of magnetic gradient force acting on the particles. Using direct numerical simulations, we show that particles within a certain center-to-center distance are inseparable under a gradient static magnetic field since they are easy aggregated and then start moving together. By contrast, it has been demonstrated that alternating repulsive and attractive interaction forces between particles can be generated to avoid the formation of aggregations when the alternating gradient magnetic field with a given alternating frequency is applied, enabling these particles to be continuously separated based on size-dependent properties. The proposed magnetic separation method and simulation results have the significance for fundamental understanding of particle dynamic behavior and improving the separation efficiency.

  2. Characteristics of finite amplitude stationary gravity waves in the atmosphere of Venus

    NASA Technical Reports Server (NTRS)

    Young, Richard E.; Walterscheid, Richard L.; Schubert, Gerald; Pfister, Leonhard; Houben, Howard; Bindschadler, Duane L.

    1994-01-01

    This paper extends the study of stationary gravity waves generated near the surface of Venus reported previously by Young et al. to include finite amplitude effects associated with large amplitude waves. Waves are forced near the surface of Venus by periodic forcing. The height-dependent profiles of static stability and mean wind in the Venus atmosphere play a very important role in the evolution of the nonlinear behavior of the waves, just as they do in the linear wave solutions. Certain wave properties are qualitatively consistent with linear wave theory, such as wave trapping, resonance, and wave evanescence for short horizontal wavelenghts. However, the finite amplitude solutions also exhibit many other interesting features. In particular, for forcing amplitudes representative of those that could be expected in mountainous regions such as Aphrodite Terra, waves generated near the surface can reach large amplitudes at and above cloud levels, with clear signatures in the circulation pattern. At still higher levels, the waves can reach large enough amplitude to break, unless damping rates above the clouds are sufficient to limit wave amplitude growth. Well below cloud levels the waves develop complex flow patterns as the result of finite amplitude wave-wave interactions, and waves are generated having considerably shorter horizontal wavelenghts than that associated with the forcing near the surface. Nonlinear interactions can excite waves that are resonant with the background wind and static stability fields even when the primary surface forcing does not, and these waves can dominate the wave spectrum near cloud levels. A global map of Venus topographic slopes derived from Magellan altimetry data shows that slopes of magnitude comparable to or exceeding that used to force the model are ubiquitous over the surface.

  3. An efficient and economical way to enhance the performance of present HTS Maglev systems by utilizing the anisotropy property of bulk superconductors

    NASA Astrophysics Data System (ADS)

    Deng, Zigang; Wang, Jiasu; Zheng, Jun; Zhang, Ya; Wang, Suyu

    2013-02-01

    We report a simple, efficient and economical way to enhance the levitation or guidance performance of present high-temperature superconducting (HTS) Maglev systems by exploring the anisotropic properties of the critical current density in the a-b plane and along the c-axis of bulk superconductors. In the method, the bulk laying mode with different c-axis directions is designed to match with the magnetic field configuration of the applied permanent magnet guideway (PMG). Experimental results indicate that more than a factor of two improvement in the levitation force or guidance force is achieved when changing the laying mode of bulk superconductors from the traditional fashion of keeping the c-axis vertical to the PMG surface to the studied one of keeping the c-axis parallel to the PMG surface, at the maximum horizontal and vertical magnetic field positions of the PMG, respectively. These phenomena resulted from the physical nature of the generated levitation force and guidance force (electromagnetic forces) and the fact that there are different critical current densities in the a-b plane and along the c axis. Based on the experimental results, new HTS Maglev systems can be designed to meet the requirements of practical heavy-load or curved-route applications.

  4. Ozone Sensitivity to Varying Greenhouse Gases and Ozone-Depleting Substances in CCMI-1 Simulations

    NASA Technical Reports Server (NTRS)

    Morgenstern, Olaf; Stone, Kane A.; Schofield, Robyn; Akiyoshi, Hideharu; Yamashita, Yousuke; Kinnison, Douglas E.; Garcia, Rolando R.; Sudo, Kengo; Plummer, David A.; Scinocca, John; hide

    2018-01-01

    Ozone fields simulated for the first phase of the Chemistry-Climate Model Initiative (CCMI-1) will be used as forcing data in the 6th Coupled Model Intercomparison Project. Here we assess, using reference and sensitivity simulations produced for CCMI-1, the suitability of CCMI-1 model results for this process, investigating the degree of consistency amongst models regarding their responses to variations in individual forcings. We consider the influences of methane, nitrous oxide, a combination of chlorinated or brominated ozone-depleting substances, and a combination of carbon dioxide and other greenhouse gases. We find varying degrees of consistency in the models' responses in ozone to these individual forcings, including some considerable disagreement. In particular, the response of total-column ozone to these forcings is less consistent across the multi-model ensemble than profile comparisons. We analyse how stratospheric age of air, a commonly used diagnostic of stratospheric transport, responds to the forcings. For this diagnostic we find some salient differences in model behaviour, which may explain some of the findings for ozone. The findings imply that the ozone fields derived from CCMI-1 are subject to considerable uncertainties regarding the impacts of these anthropogenic forcings. We offer some thoughts on how to best approach the problem of generating a consensus ozone database from a multi-model ensemble such as CCMI-1.

  5. Ozone sensitivity to varying greenhouse gases and ozone-depleting substances in CCMI-1 simulations

    NASA Astrophysics Data System (ADS)

    Morgenstern, Olaf; Stone, Kane A.; Schofield, Robyn; Akiyoshi, Hideharu; Yamashita, Yousuke; Kinnison, Douglas E.; Garcia, Rolando R.; Sudo, Kengo; Plummer, David A.; Scinocca, John; Oman, Luke D.; Manyin, Michael E.; Zeng, Guang; Rozanov, Eugene; Stenke, Andrea; Revell, Laura E.; Pitari, Giovanni; Mancini, Eva; Di Genova, Glauco; Visioni, Daniele; Dhomse, Sandip S.; Chipperfield, Martyn P.

    2018-01-01

    Ozone fields simulated for the first phase of the Chemistry-Climate Model Initiative (CCMI-1) will be used as forcing data in the 6th Coupled Model Intercomparison Project. Here we assess, using reference and sensitivity simulations produced for CCMI-1, the suitability of CCMI-1 model results for this process, investigating the degree of consistency amongst models regarding their responses to variations in individual forcings. We consider the influences of methane, nitrous oxide, a combination of chlorinated or brominated ozone-depleting substances, and a combination of carbon dioxide and other greenhouse gases. We find varying degrees of consistency in the models' responses in ozone to these individual forcings, including some considerable disagreement. In particular, the response of total-column ozone to these forcings is less consistent across the multi-model ensemble than profile comparisons. We analyse how stratospheric age of air, a commonly used diagnostic of stratospheric transport, responds to the forcings. For this diagnostic we find some salient differences in model behaviour, which may explain some of the findings for ozone. The findings imply that the ozone fields derived from CCMI-1 are subject to considerable uncertainties regarding the impacts of these anthropogenic forcings. We offer some thoughts on how to best approach the problem of generating a consensus ozone database from a multi-model ensemble such as CCMI-1.

  6. Mechanical properties of asthmatic airway smooth muscle.

    PubMed

    Chin, Leslie Y M; Bossé, Ynuk; Pascoe, Chris; Hackett, Tillie L; Seow, Chun Y; Paré, Peter D

    2012-07-01

    Airway smooth muscle (ASM) is the major effector of excessive airway narrowing in asthma. Changes in some of the mechanical properties of ASM could contribute to excessive narrowing and have not been systematically studied in human ASM from nonasthmatic and asthmatic subjects. Human ASM strips (eight asthmatic and six nonasthmatic) were studied at in situ length and force was normalised to maximal force induced by electric field stimulation (EFS). Measurements included: passive and active force versus length before and after length adaptation, the force-velocity relationship, maximal shortening and force recovery after length oscillation. Force was converted to stress by dividing by cross-sectional area of muscle. The only functional differences were that the asthmatic tissue was stiffer at longer lengths (p<0.05) and oscillatory strain reduced isometric force in response to EFS by 19% as opposed to 36% in nonasthmatics (p<0.01). The mechanical properties of human ASM from asthmatic and nonasthmatic subjects are comparable except for increased passive stiffness and attenuated decline in force generation after an oscillatory perturbation. These data may relate to reduced bronchodilation induced by a deep inspiration in asthmatic subjects.

  7. Low-energy vibrations of the group 10 metal monocarbonyl MCO (M = Ni, Pd, and Pt): rotational spectroscopy and force field analysis.

    PubMed

    Okabayashi, Toshiaki; Yamamoto, Takuya; Okabayashi, Emi Y; Tanimoto, Mitsutoshi

    2011-03-17

    The rotational spectra of NiCO and PdCO in the ground and ν(2) excited vibrational states were observed by employing a source-modulated microwave spectrometer. The NiCO and PdCO molecules were generated in a free space cell by the sputtering reaction of nickel and palladium sheets, respectively, lining the inner surface of a stainless steel cathode with a dc glow plasma of CO and Ar. The molecular constants of NiCO and PdCO were determined by least-squares analysis. By force field analysis for the molecular constants of not only NiCO and PdCO but also of PtCO as previously reported, the harmonic force constants were determined for these three group 10 metal monocarbonyls. The vibrational wavenumbers derived for the lower M-C stretching vibrations were in good agreement with those obtained from the IR spectra in noble gas matrices and those predicted by several quantum chemical calculations published in the past. The bending vibrational wavenumbers derived by the force field analysis were also consistent with most quantum chemical calculations previously reported, but showed systematic discrepancies from the matrix IR values by about 40 cm(-1), even after reassignment (ν(2) band → 2ν(2) band) of the matrix IR spectra of PdCO and PtCO.

  8. Spatial and temporal modulation of joint stiffness during multijoint movement.

    PubMed

    Mah, C D

    2001-02-01

    Joint stiffness measurements during small transient perturbations have suggested that stiffness during movement is different from that observed during posture. These observations are problematic for theories like the classical equilibrium point hypothesis, which suggest that desired trajectories during movement are enforced by joint stiffness. We measured arm impedances during large, slow perturbations to obtain detailed information about the spatial and temporal modulation of stiffness and viscosity during movement. While our measurements of stiffness magnitudes during movement generally agreed with the results of measurements using fast perturbations, they revealed that joint stiffness undergoes stereotyped changes in magnitude and aspect ratio which depend on the direction of movement and show a strong dependence on joint angles. Movement simulations using measured parameters show that the measured modulation of impedance acts as an energy conserving force field to constrain movement. This mechanism allows for a computationally simplified account of the execution of multijoint movement. While our measurements do not rule out a role for afferent feedback in force generation, the observed stereotyped restoring forces can allow a dramatic relaxation of the accuracy requirements for forces generated by other control mechanisms, such as inverse dynamical models.

  9. Periodic acoustic radiation from a low aspect ratio propeller

    NASA Astrophysics Data System (ADS)

    Muench, John David

    An experimental program was conducted with the objective of providing high fidelity measurements of propeller inflow, unsteady blade surface pressures, and discrete acoustic radiation over a wide range of speeds. Anechoic wind tunnel experiments were preformed using the SISUP propeller. The upstream stator blades generate large wake deficits that result in periodic unsteady blade forces that acoustically radiate at blade passing frequency and higher harmonics. The experimental portion of this research successfully measured the inflow velocity, blade span unsteady pressures and directive characteristics of the blade-rate radiated noise associated with this complex propeller geometry while the propeller was operating on design. The spatial harmonic decomposition of the inflow revealed significant coefficients at 8, 16 and 24. The magnitude of the unsteady blade forces scale as U4 and linearly shift in frequency with speed. The magnitude of the discrete frequency acoustic levels associated with blade rate scale as U6 and also shift linearly with speed. At blade-rate, the far-field acoustic directivity has a dipole-like directivity oriented perpendicular to the inflow. At the first harmonic of blade-rate, the far-field directivity is not as well defined. The experimental inflow and blade surface pressure results were used to generate an acoustic prediction at blade rate based on a blade strip theory model developed by Blake (1986). The predicted acoustic levels were compared to the experimental results. The model adequately predicts the measured sound field at blade rate at 120 ft/sec. Radiated noise at blade-rate for 120 ft/s can be described by a dipole, whose orientation is perpendicular to the flow and is generated by the interaction of the rotating propeller with the 8th harmonic of the inflow. At blade-rate for 60 ft/s, the model under predicts measured levels. At the first harmonic of blade-rate, for 120 ft/s, the sound field is described as a combination of dipole sources, one generated by the 16 th harmonic, perpendicular to the inflow, and the other generated by the 12th harmonic of the inflow parallel to the inflow. At the first harmonic of blade-rate for 60 ft/s, the model under predicts measured levels.

  10. An analysis of transient flow in upland watersheds: interactions between structure and process

    Treesearch

    David Lawrence Brown

    1995-01-01

    The physical structure and hydrological processes of upland watersheds interact in response to forcing functions such as rainfall, leading to storm runoff generation and pore pressure evolution. Transient fluid flow through distinct flow paths such as the soil matrix, macropores, saprolite, and bedrock may be viewed as a consequence of such interactions. Field...

  11. Thermal properties of a large-bore cryocooled 10 T superconducting magnet for a hybrid magnet

    NASA Astrophysics Data System (ADS)

    Ishizuka, M.; Hamajima, T.; Itou, T.; Sakuraba, J.; Nishijima, G.; Awaji, S.; Watanabe, K.

    2010-11-01

    A cryocooled 10 T superconducting magnet with a 360 mm room temperature bore has been developed for a hybrid magnet. The superconducting magnet cooled by four Gifford-McMahon cryocoolers has been designed to generate a magnetic field of 10 T. Since superconducting wires composed of coils were subjected to large hoop stress over 150 MPa and Nb3Sn superconducting wires particularly showed a low mechanical strength due to those brittle property, Nb3Sn wires strengthened by NbTi-filaments were developed for the cryocooled superconducting magnet. We have already reported that the hybrid magnet could generate the resultant magnetic field of 27.5 T by adding 8.5 T from the superconducting magnet and 19 T from a water-cooled Bitter resistive magnet, after the water-cooled resistive magnet was inserted into the 360 mm room temperature bore of the cryocooled superconducting magnet. When the hybrid magnet generated the field of 27.5 T, it achieved the high magnetic-force field (B × ∂Bz/∂z) of 4500 T2/m, which was useful for magneto-science in high fields such as materials levitation research. In this paper, we particularly focus on the cause that the cryocooled superconducting magnet was limited to generate the designed magnetic field of 10 T in the hybrid magnet operation. As a result, it was found that there existed mainly two causes as the limitation of the magnetic field generation. One was a decrease of thermal conductive passes due to exfoliation from the coil bobbin of the cooling flange. The other was large AC loss due to both a thick Nb3Sn layer and its large diameter formed on Nb-barrier component in Nb3Sn wires.

  12. Time-varying span efficiency through the wingbeat of desert locusts.

    PubMed

    Henningsson, Per; Bomphrey, Richard J

    2012-06-07

    The flight performance of animals depends greatly on the efficacy with which they generate aerodynamic forces. Accordingly, maximum range, load-lifting capacity and peak accelerations during manoeuvres are all constrained by the efficiency of momentum transfer to the wake. Here, we use high-speed particle image velocimetry (1 kHz) to record flow velocities in the near wake of desert locusts (Schistocerca gregaria, Forskål). We use the measured flow fields to calculate time-varying span efficiency throughout the wing stroke cycle. The locusts are found to operate at a maximum span efficiency of 79 per cent, typically at a plateau of about 60 per cent for the majority of the downstroke, but at lower values during the upstroke. Moreover, the calculated span efficiencies are highest when the largest lift forces are being generated (90% of the total lift is generated during the plateau of span efficiency) suggesting that the combination of wing kinematics and morphology in locust flight perform most efficiently when doing the most work.

  13. DOE Office of Scientific and Technical Information (OSTI.GOV)

    de Hatten, Xavier; Cournia, Zoe; Huc, Ivan

    The increasing importance of hydrogenase enzymes in the new energy research field has led us to examine the structure and dynamics of potential hydrogenase mimics, based on a ferrocene-peptide scaffold, using molecular dynamics (MD) simulations. To enable this MD study, a molecular mechanics force field for ferrocene-bearing peptides was developed and implemented in the CHARMM simulation package, thus extending the usefulness of the package into peptide-bioorganometallic chemistry. Using the automated frequency-matching method (AFMM), optimized intramolecular force-field parameters were generated through quantum chemical reference normal modes. The partial charges for ferrocene were derived by fitting point charges to quantum-chemically computed electrostaticmore » potentials. The force field was tested against experimental X-ray crystal structures of dipeptide derivatives of ferrocene-1,1'-dicarboxylic acid. The calculations reproduce accurately the molecular geometries, including the characteristic C{sub 2}-symmetrical intramolecular hydrogen-bonding pattern, that were stable over 0.1 {micro}s MD simulations. The crystal packing properties of ferrocene-1-(D)alanine-(D)proline-1'-(D)alanine-(D)proline were also accurately reproduced. The lattice parameters of this crystal were conserved during a 0.1 {micro}s MD simulation and match the experimental values almost exactly. Simulations of the peptides in dichloromethane are also in good agreement with experimental NMR and circular dichroism (CD) data in solution. The developed force field was used to perform MD simulations on novel, as yet unsynthesized peptide fragments that surround the active site of [Ni-Fe] hydrogenase. The results of this simulation lead us to propose an improved design for synthetic peptide-based hydrogenase models. The presented MD simulation results of metallocenes thereby provide a convincing validation of our proposal to use ferrocene-peptides as minimal enzyme mimics.« less

  14. DOE Office of Scientific and Technical Information (OSTI.GOV)

    De Hatten, Xavier; Cournia, Zoe; Smith, Jeremy C

    The increasing importance of hydrogenase enzymes in the new energy research field has led us to examine the structure and dynamics of potential hydrogenase mimics, based on a ferrocene-peptide scaffold, using molecular dynamics (MD) simulations. To enable this MD study, a molecular mechanics force field for ferrocene-bearing peptides was developed and implemented in the CHARMM simulation package, thus extending the usefulness of the package into peptide-bioorganometallic chemistry. Using the automated frequency-matching method (AFMM), optimized intramolecular force-field parameters were generated through quantum chemical reference normal modes. The partial charges for ferrocene were derived by fitting point charges to quantum-chemically computed electrostaticmore » potentials. The force field was tested against experimental X-ray crystal structures of dipeptide derivatives of ferrocene-1,1{prime}-dicarboxylic acid. The calculations reproduce accurately the molecular geometries, including the characteristic C2-symmetrical intramolecular hydrogen-bonding pattern, that were stable over 0.1{micro}s MD simulations. The crystal packing properties of ferrocene-1-(D)alanine-(D)proline{prime}-1-(D)alanine-(D)proline were also accurately reproduced. The lattice parameters of this crystal were conserved during a 0.1 s MD simulation and match the experimental values almost exactly. Simulations of the peptides in dichloromethane are also in good agreement with experimental NMR and circular dichroism (CD) data in solution. The developed force field was used to perform MD simulations on novel, as yet unsynthesized peptide fragments that surround the active site of [Ni-Fe] hydrogenase. The results of this simulation lead us to propose an improved design for synthetic peptide-based hydrogenase models. The presented MD simulation results of metallocenes thereby provide a convincing validation of our proposal to use ferrocene-peptides as minimal enzyme mimics.« less

  15. Applications of aerospace technology in industry. A technology transfer profile: Cryogenics

    NASA Technical Reports Server (NTRS)

    1971-01-01

    Cryogenics is especially interesting when viewed from the perspective of technology transfer. Its recent rapid growth has been due to demands of both industry and aerospace. This environment provides an unusual opportunity to identify some of the forces active during a period of broad technological change and at the same time further the understanding of the technology transfer process. That process is specifically defined here as the ways in which technology, generated in NASA programs, contributes to technological change. In addition to presenting a brief overview of the cryogenics field and describing certain representative examples of the transfer of NASA-generated technology to the private sector, this presentation explores a singular relationship between NASA and another federal agency, the National Bureau of Standards. The relationship has operated both to generate and disseminate information fundamental to the broad growth of the cryogenics field.

  16. Basic Study on the Generation of RF Plasmas in Premixed Oxy-combustion with Methane

    NASA Astrophysics Data System (ADS)

    Osaka, Yugo; Kobayashi, Noriyuki; Razzak, M. A.; Ohno, Noriyasu; Takamura, Shuichi; Uesugi, Yoshihiko

    Oxy-combustion generates a high temperature field (above 3000 K), which is applied to next generation power plants and high temperature industrial technologies because of N2 free processes. However, the combustion temperature is so high that the furnace wall may be fatally damaged. In addition, it is very difficult to control the heat flux and chemical species' concentrations because of rapid chemical reactions. We have developed a new method for controlling the flame by electromagnetic force on this field. In this paper, we experimentally investigated the power coupling between the premixed oxy-combustion with methane and radio frequency (RF) power through the induction coil. By optimizing the power coupling, we observed that the flame can absorb RF power up to 1.5 kW. Spectroscopic measurements also showed an increase in the emission intensity from OH radicals in the flame, indicating improved combustibility.

  17. Optimization and experimental validation of electrostatic adhesive geometry

    NASA Astrophysics Data System (ADS)

    Ruffatto, D.; Shah, J.; Spenko, M.

    This paper introduces a method to optimize the electrode geometry of electrostatic adhesives for robotic gripping, attachment, and manipulation applications. Electrostatic adhesion is achieved by applying a high voltage potential, on the order of kV, to a set of electrodes, which generates an electric field. The electric field polarizes the substrate material and creates an adhesion force. Previous attempts at creating electro-static adhesives have shown them to be effective, but researchers have made no effort to optimize the electrode configuration and geometry. We have shown that by optimizing the geometry of the electrode configuration, the electric field strength, and therefore the adhesion force, is enhanced. To accomplish this, Comsol Multiphysics was utilized to evaluate the average electric field generated by a given electrode geometry. Several electrode patterns were evaluated, including parallel conductors, concentric circles, Hilbert curves (a fractal geometry) and spirals. The arrangement of the electrodes in concentric circles with varying electrode widths proved to be the most effective. The most effective sizing was to use the smallest gap spacing allowable coupled with a variable electrode width. These results were experimentally validated on several different surfaces including drywall, wood, tile, glass, and steel. A new manufacturing process allowing for the fabrication of thin, conformal electro-static adhesive pads was utilized. By combining the optimized electrode geometry with the new fabrication process we are able to demonstrate a marked improvement of up to 500% in shear pressure when compared to previously published values.

  18. Microgravity and Hypogravity Compatible Methods for the Destruction of Solid Wastes by Magnetically Assisted Gasification

    NASA Technical Reports Server (NTRS)

    Atwater, James E.; Akse, James R.; Wheeler, Richard R., Jr.; Jovanovic, Goran N.; Pinto-Espinoza, Joaquin; Reed, Brian; Sornchamni, Thana

    2003-01-01

    This report summarizes a three-year collaborative effort between researchers at UMPQUA Research Company (URC) and the Chemical Engineering Department at Oregon State University (OSU). The Magnetically Assisted Gasification (MAG) concept was originally conceived as a microgravity and hypogravity compatible means for the decomposition of solid waste materials generated aboard spacecraft, lunar and planetary habitations, and for the recovery of potentially valuable resources. While a number of methods such as supercritical water oxidation (SCW0), fluidized bed incineration, pyrolysis , composting and related biological processes have been demonstrated for the decomposition of solid wastes, none of these methods are particularly well- suited for employment under microgravity or hypogravity conditions. For example, fluidized bed incineration relies upon a balance between drag forces which the flowing gas stream exerts upon the fluidization particles and the opposing force of gravity. In the absence of gravity, conventional fluidization cannot take place. Hypogravity operation can also be problematic for conventional fluidized bed reactors, because the various factors which govern fluidization phenomena do not all scale linearly with gravity. For this reason it may be difficult to design and test fluidized bed reactors in lg, which are intended to operate under different gravitational conditions. However, fluidization can be achieved in microgravity (and hypogravity) if a suitable replacement force to counteract the forces between fluid and particles can be found. Possible alternatives include: centripetal force, electric fields, or magnetic fields. Of these, magnetic forces created by the action of magnetic fields and magnetic field gradients upon ferromagnetic media offer the most practical approach. The goal of this URC-OSU collaborative effort was to develop magnetic hardware and methods to control the degree of fluidization (or conversely consolidation) of granular ferromagnetic media and to employ these innovations in sequential filtration and fluidized bed processes for the segregation and decomposition of solid waste materials, and for the concentration and collection of inorganic residue (ash). This required the development of numerous enabling technologies and tools.

  19. Theoretical and Experimental Analysis of an Induction Planar Actuator with Different Secondaries—A Planar Driver Application for Metallic Surface Inspection

    PubMed Central

    Treviso, Felipe; Silveira, Marilia A.; Flores Filho, Aly F.; Dorrell, David G.

    2016-01-01

    This paper presents a study on an induction planar actuator concept. The device uses the same principles as a linear induction motor in which the interaction between a travelling magnetic field and a conducting surface produces eddy currents that leads to the generation of a thrust force and can result in movement over a metallic surface. This can benefit the inspection of metallic surfaces based on the driving platform provided by the induction planar actuator. Equations of the magnetic and electric fields are presented and, by means of these equations, the forces involved were calculated. The behaviour of thrust and normal forces was analysed through the equations and by numerical models, and compared with the results obtained by measurements on a device prototype built in the laboratory as part of the study. With relation to the surface under inspection that forms the secondary, three cases were analysed: (1) a double-layered secondary formed by aluminium and ferromagnetic slabs; (2) a single aluminium layer and (3) a single ferromagnetic layer. Theoretical and measured values of thrust and normal forces showed good correlation. PMID:27007377

  20. Oscillatory magnetic tweezers based on ferromagnetic beads and simple coaxial coils

    NASA Astrophysics Data System (ADS)

    Trepat, Xavier; Grabulosa, Mireia; Buscemi, Lara; Rico, Fèlix; Fabry, Ben; Fredberg, Jeffrey J.; Farré, Ramon

    2003-09-01

    We report the design and validation of simple magnetic tweezers for oscillating ferromagnetic beads in the piconewton and nanometer scales. The system is based on a single pair of coaxial coils operating in two sequential modes: permanent magnetization of the beads through a large and brief pulse of magnetic field and generation of magnetic gradients to produce uniaxial oscillatory forces. By using this two step method, the magnetic moment of the beads remains constant during measurements. Therefore, the applied force can be computed and varies linearly with the driving signal. No feedback control is required to produce well defined force oscillations over a wide bandwidth. The design of the coils was optimized to obtain high magnetic fields (280 mT) and gradients (2 T/m) with high homogeneity (5% variation) within the sample. The magnetic tweezers were implemented in an inverted optical microscope with a videomicroscopy-based multiparticle tracking system. The apparatus was validated with 4.5 μm magnetite beads obtaining forces up to ˜2 pN and subnanometer resolution. The applicability of the device includes microrheology of biopolymer and cell cytoplasm, molecular mechanics, and mechanotransduction in living cells.

  1. Generation of BBFs and DFs, Formation of Substorm Auroras and Triggers of Substorm Onset

    NASA Astrophysics Data System (ADS)

    Song, Y.; Lysak, R. L.

    2014-12-01

    Substorm onset is a dynamical response of the MI coupling system to external solar wind driving conditions and to internal dynamical processes. During the growth phase, the solar wind energy and momentum are transferred into the magnetosphere via MHD mesoscale Alfvenic interactions throughout the magnetopause current sheet. A decrease in momentum transfer from the solar wind into the magnetosphere starts a preconditioning stage, and produces a strong earthward body force acting on the whole magnetotail within a short time period. The strong earthward force will cause localized transients in the tail, such as multiple BBFs, DFs, plasma bubbles, and excited MHD waves. On auroral flux tubes, FACs carried by Alfven waves are generated by Alfvenic interactions between tail earthward flows associated with BBFs/DFs/Bubbles and the ionospheric drag. Nonlinear Alfvenic interaction between the incident and reflected Alfven wave packets in the auroral acceleration region can produce localized parallel electric fields and substorm auroral arcs. During the preconditioning stage prior to substorm onset, the generation of parallel electric fields and auroral arcs can redistribute perpendicular mechanical and magnetic stresses, "decoupling" the magnetosphere from the ionosphere drag. This will enhance the tail earthward flows and rapidly build up stronger parallel electric fields in the auroral acceleration region, leading to a sudden and violent tail energy release and substorm auroral poleward expansion. We suggest that in preconditioning stage, the decrease in the solar wind momentum transfer is a necessary condition of the substorm onset. Additionally, "decoupling" the magnetosphere from ionosphere drag can trigger substorm expansion onset.

  2. The precession dynamo experiment at HZDR

    NASA Astrophysics Data System (ADS)

    Giesecke, A.; Albrecht, T.; Gerbeth, G.; Gundrum, T.; Nore, C.; Stefani, F.; Steglich, C.

    2013-12-01

    Most planets of the solar system are accompanied by a magnetic field with a large scale structure. These fields are generated by the dynamo effect, the process that provides for the transfer of kinetic energy from a flow of a conducting fluid into magnetic energy. In case of planetary dynamos it is generally assumed that these flows are driven by thermal and/or chemical convection but other driving sources like libration, tidal forcing or precession are possible as well. Precessional forcing, in particular, has been discussed since long as an at least additional power source for the geodynamo. A fluid flow of liquid sodium, solely driven by precession, will be the source for magnetic field generation in the next generation dynamo experiment currently under development at the Helmholz-Zentrum Dresden-Rossendorf (HZDR). In contrast to previous dynamo experiments no internal blades, propellers or complex systems of guiding tubes will be used for the optimization of the flow properties. However, in order to reach sufficiently high magnetic Reynolds numbers required for the onset of dynamo action rather large dimensions of the container are necessary making the construction of the experiment a challenge. At present state a small scale water experiment is running in order to estimate the hydrodynamic flow properties in dependence of precession angle and precession rate. The measurements are utilized in combination with numerical simulations of the hydrodynamic case as input data for kinematic simulations of the induction equation. The resulting growth rates and the corresponding critical magnetic Reynolds numbers will provide a restriction of the useful parameter regime and will allow an optimization of the experimental configuration.

  3. Collisionless distribution function for the relativistic force-free Harris sheet

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stark, C. R.; Neukirch, T.

    A self-consistent collisionless distribution function for the relativistic analogue of the force-free Harris sheet is presented. This distribution function is the relativistic generalization of the distribution function for the non-relativistic collisionless force-free Harris sheet recently found by Harrison and Neukirch [Phys. Rev. Lett. 102, 135003 (2009)], as it has the same dependence on the particle energy and canonical momenta. We present a detailed calculation which shows that the proposed distribution function generates the required current density profile (and thus magnetic field profile) in a frame of reference in which the electric potential vanishes identically. The connection between the parameters ofmore » the distribution function and the macroscopic parameters such as the current sheet thickness is discussed.« less

  4. Remote Sensing Characterization of Two-dimensional Wave Forcing in the Surf Zone

    NASA Astrophysics Data System (ADS)

    Carini, R. J.; Chickadel, C. C.; Jessup, A. T.

    2016-02-01

    In the surf zone, breaking waves drive longshore currents, transport sediment, shape bathymetry, and enhance air-sea gas and particle exchange. Furthermore, wave group forcing influences the generation and duration of rip currents. Wave breaking exhibits large gradients in space and time, making it challenging to measure in situ. Remote sensing technologies, specifically thermal infrared (IR) imagery, can provide detailed spatial and temporal measurements of wave breaking at the water surface. We construct two-dimensional maps of active wave breaking from IR imagery collected during the Surf Zone Optics Experiment in September 2010 at the US Army Corps of Engineers' Field Research Facility in Duck, NC. For each breaker identified in the camera's field of view, the crest-perpendicular length of the aerated breaking region (roller length) and wave direction are estimated and used to compute the wave energy dissipation rate. The resultant dissipation rate maps are analyzed over different time scales: peak wave period, infragravity wave period, and tidal wave period. For each time scale, spatial maps of wave breaking are used to characterize wave forcing in the surf zone for a variety of wave conditions. The following phenomena are examined: (1) wave dissipation rates over the bar (location of most intense breaking) have increased variance in infragravity wave frequencies, which are different from the peak frequency of the incoming wave field and different from the wave forcing variability at the shoreline, and (2) wave forcing has a wider spatial distribution during low tide than during high tide due to depth-limited breaking over the barred bathymetry. Future work will investigate the response of the variability in wave setup, longshore currents and rip currents, to the variability in wave forcing in the surf zone.

  5. Proton fire hose instabilities in the expanding solar wind: Role of oblique magnetic field

    NASA Astrophysics Data System (ADS)

    Hellinger, Petr

    2016-04-01

    The double adiabatic (CGL) approximation for the ideal (Parker) interplanetary magnetic field (IMF) predicts generation of the parallel particle temperature anisotropy (T∥ > T⊥) for a nearly radial magnetic field whereas for a strongly oblique IMF generation of the opposite temperature anisotropy is expected. The transition between the two behaviours is expected at around 45o, i.e. around 1 AU in the solar wind in the ecliptic plane. We investigate properties of a proton-electron plasma system in the solar wind using hybrid expanding box simulations starting with an oblique IMF. The simulated system becomes unstable with respect to the parallel and oblique fire hose instabilities and is forced to stay around the corresponding marginal stability. Rotation of the IMF reduces the time system stays near the marginal stability regions and for a strongly transverse IMF the system moves away from the regions unstable with respect to the fire hose instabilities.

  6. Electron energy recovery system for negative ion sources

    DOEpatents

    Dagenhart, W.K.; Stirling, W.L.

    1979-10-25

    An electron energy recovery system for negative ion sources is provided. The system, employing crossed electric and magnetic fields, separates the electrons from the ions as they are extracted from the ion source plasma generator and before the ions are accelerated to their full energy. With the electric and magnetic fields oriented 90/sup 0/ to each other, the electrons remain at approximately the electrical potential at which they were generated. The electromagnetic forces cause the ions to be accelerated to the full accelerating supply voltage energy while being deflected through an angle of less than 90/sup 0/. The electrons precess out of the accelerating field region into an electron recovery region where they are collected at a small fraction of the full accelerating supply energy. It is possible, by this method, to collect > 90% of the electrons extracted along with the negative ions from a negative ion source beam at < 4% of full energy.

  7. Comparison of radiated noise from shrouded and unshrouded propellers

    NASA Technical Reports Server (NTRS)

    Eversman, Walter

    1992-01-01

    The ducted propeller in a free field is modeled using the finite element method. The generation, propagation, and radiation of sound from a ducted fan is described by the convened wave equation with volumetric body forces. Body forces are used to introduce the blade loading for rotating blades and stationary exit guide vanes. For an axisymmetric nacelle or shroud, the problem is formulated in cylindrical coordinates. For a specified angular harmonic, the angular coordinate is eliminated, resulting in a two-dimensional representation. A finite element discretization based on nine-node quadratic isoparametric elements is used.

  8. Quiet swimming at low Reynolds number

    NASA Astrophysics Data System (ADS)

    Andersen, Anders; Wadhwa, Navish; Kiørboe, Thomas

    2015-04-01

    The stresslet provides a simple model of the flow created by a small, freely swimming and neutrally buoyant aquatic organism and shows that the far field fluid disturbance created by such an organism in general decays as one over distance squared. Here we discuss a quieter swimming mode that eliminates the stresslet component of the flow and leads to a faster spatial decay of the fluid disturbance described by a force quadrupole that decays as one over distance cubed. Motivated by recent experimental results on fluid disturbances due to small aquatic organisms, we demonstrate that a three-Stokeslet model of a swimming organism which uses breast stroke type kinematics is an example of such a quiet swimmer. We show that the fluid disturbance in both the near field and the far field is significantly reduced by appropriately arranging the propulsion apparatus, and we find that the far field power laws are valid surprisingly close to the organism. Finally, we discuss point force models as a general framework for hypothesis generation and experimental exploration of fluid mediated predator-prey interactions in the planktonic world.

  9. Quiet swimming at low Reynolds number.

    PubMed

    Andersen, Anders; Wadhwa, Navish; Kiørboe, Thomas

    2015-04-01

    The stresslet provides a simple model of the flow created by a small, freely swimming and neutrally buoyant aquatic organism and shows that the far field fluid disturbance created by such an organism in general decays as one over distance squared. Here we discuss a quieter swimming mode that eliminates the stresslet component of the flow and leads to a faster spatial decay of the fluid disturbance described by a force quadrupole that decays as one over distance cubed. Motivated by recent experimental results on fluid disturbances due to small aquatic organisms, we demonstrate that a three-Stokeslet model of a swimming organism which uses breast stroke type kinematics is an example of such a quiet swimmer. We show that the fluid disturbance in both the near field and the far field is significantly reduced by appropriately arranging the propulsion apparatus, and we find that the far field power laws are valid surprisingly close to the organism. Finally, we discuss point force models as a general framework for hypothesis generation and experimental exploration of fluid mediated predator-prey interactions in the planktonic world.

  10. Magnetic Field Generation Processes Involving Gravity and Differential Rotation. Solitary Plasma Rings Formation around Black Holes

    NASA Astrophysics Data System (ADS)

    Coppi, Bruno

    2012-10-01

    A clear theoretical framework to describe how magnetic fields are generated and amplified is provided by the magneto-gravitational modes that involve both differential rotation and gravity and for which other factors such as temperature gradients can contribute to their excitation. These modes are shown to be important for the evolution of plasma disks surrounding black holes.footnotetextB. Coppi, Phys. Plasmas 18, 032901 (2011) Non-linear and axi-symmetric plasmas and associated field configurations are found under stationary conditions that do not involve the presence of a pre-existing ``seed'' magnetic field unlike other configurations found previously.footnotetextIbid. The relevant magnetic energy density is of the order of the gravitationally confined plasma pressure. The solitary plasma rings that characterize these configurations are localized radially over regions with vanishing differential rotation and can be envisioned as the saturated state of magneto-gravitational modes. The ``source'' of these configurations is the combination of the gravitational force and of the plasma density gradient orthogonal to it.

  11. Thunderstorm Hypothesis Reasoner

    NASA Technical Reports Server (NTRS)

    Mulvehill, Alice M.

    1994-01-01

    THOR is a knowledge-based system which incorporates techniques from signal processing, pattern recognition, and artificial intelligence (AI) in order to determine the boundary of small thunderstorms which develop and dissipate over the area encompassed by KSC and the Cape Canaveral Air Force Station. THOR interprets electric field mill data (derived from a network of electric field mills) by using heuristics and algorithms about thunderstorms that have been obtained from several domain specialists. THOR generates two forms of output: contour plots which visually describe the electric field activity over the network and a verbal interpretation of the activity. THOR uses signal processing and pattern recognition to detect signatures associated with noise or thunderstorm behavior in a near real time fashion from over 31 electrical field mills. THOR's AI component generates hypotheses identifying areas which are under a threat from storm activity, such as lightning. THOR runs on a VAX/VMS at the Kennedy Space Center. Its software is a coupling of C and FORTRAN programs, several signal processing packages, and an expert system development shell.

  12. The interoperability force in the ERP field

    NASA Astrophysics Data System (ADS)

    Boza, Andrés; Cuenca, Llanos; Poler, Raúl; Michaelides, Zenon

    2015-04-01

    Enterprise resource planning (ERP) systems participate in interoperability projects and this participation sometimes leads to new proposals for the ERP field. The aim of this paper is to identify the role that interoperability plays in the evolution of ERP systems. To go about this, ERP systems have been first identified within interoperability frameworks. Second, the initiatives in the ERP field driven by interoperability requirements have been identified from two perspectives: technological and business. The ERP field is evolving from classical ERP as information system integrators to a new generation of fully interoperable ERP. Interoperability is changing the way of running business, and ERP systems are changing to adapt to the current stream of interoperability.

  13. The role of electro-osmosis and dielectrophoresis in collection of micro/nano size particles in low frequency AC electric field

    NASA Astrophysics Data System (ADS)

    Wei, Chehung; Hsu, Che-Wei; Wang, Ching-Chieh

    2007-09-01

    The collecting and sorting micro size particles by electric force is easy to integrate with other bioassays. There are many forms of electric forces such as electrophoresis, dielectrophoresis and electroosmosis which can be used to manipulate particles. In an attempt to understand the role of electroosmosis and dielectrophoresis in the collection of micro size particles, a small device made of two parallel plates is used to study the particle movement under AC electric field. The device is fabricated by a top electrode and a bottom electrode separated by a spacer. The top electrode is made from an ITO glass where the bottom electrode is made of Corning 1737 glass sputtered with chromium. A dielectric layer is fabricated by spin coating a thin photo-resist (0.5~1μm) on the bottom electrode and a spacer made of curing PDMS is utilized to separate these electrodes. A 900μm × 900μm collecting chamber is fabricated on the bottom electrode via photolithography. The amine-modified polystyrene fluorescent particles whose average size is 1 μm were used for collection experiments. Different frequency and power were applied to generate the non-uniform electric field. It was found that frequency is the critical factor for electroosmotic velocity. There seems to be an optimum frequency that leads to largest particle velocity. The underlying mechanism is believed to the competing forces among dielectrophoresis and electroosmosis. This device demonstrates that the electroosmosis force is suitable for collecting bio-particles in AC electric field.

  14. All-Atom Polarizable Force Field for DNA Based on the Classical Drude Oscillator Model

    PubMed Central

    Savelyev, Alexey; MacKerell, Alexander D.

    2014-01-01

    Presented is a first generation atomistic force field for DNA in which electronic polarization is modeled based on the classical Drude oscillator formalism. The DNA model is based on parameters for small molecules representative of nucleic acids, including alkanes, ethers, dimethylphosphate, and the nucleic acid bases and empirical adjustment of key dihedral parameters associated with the phosphodiester backbone, glycosidic linkages and sugar moiety of DNA. Our optimization strategy is based on achieving a compromise between satisfying the properties of the underlying model compounds in the gas phase targeting QM data and reproducing a number of experimental properties of DNA duplexes in the condensed phase. The resulting Drude force field yields stable DNA duplexes on the 100 ns time scale and satisfactorily reproduces (1) the equilibrium between A and B forms of DNA and (2) transitions between the BI and BII sub-states of B form DNA. Consistency with the gas phase QM data for the model compounds is significantly better for the Drude model as compared to the CHARMM36 additive force field, which is suggested to be due to the improved response of the model to changes in the environment associated with the explicit inclusion of polarizability. Analysis of dipole moments associated with the nucleic acid bases shows the Drude model to have significantly larger values than those present in CHARMM36, with the dipoles of individual bases undergoing significant variations during the MD simulations. Additionally, the dipole moment of water was observed to be perturbed in the grooves of DNA. PMID:24752978

  15. Bio-inspired magnetic swimming microrobots for biomedical applications.

    PubMed

    Peyer, Kathrin E; Zhang, Li; Nelson, Bradley J

    2013-02-21

    Microrobots have been proposed for future biomedical applications in which they are able to navigate in viscous fluidic environments. Nature has inspired numerous microrobotic locomotion designs, which are suitable for propulsion generation at low Reynolds numbers. This article reviews the various swimming methods with particular focus on helical propulsion inspired by E. coli bacteria. There are various magnetic actuation methods for biomimetic and non-biomimetic microrobots, such as rotating fields, oscillating fields, or field gradients. They can be categorized into force-driven or torque-driven actuation methods. Both approaches are reviewed and a previous publication has shown that torque-driven actuation scales better to the micro- and nano-scale than force-driven actuation. Finally, the implementation of swarm or multi-agent control is discussed. The use of multiple microrobots may be beneficial for in vivo as well as in vitro applications. Thus, the frequency-dependent behavior of helical microrobots is discussed and preliminary experimental results are presented showing the decoupling of an individual agent within a group of three microrobots.

  16. MagnetoSperm: A microrobot that navigates using weak magnetic fields

    NASA Astrophysics Data System (ADS)

    Khalil, Islam S. M.; Dijkslag, Herman C.; Abelmann, Leon; Misra, Sarthak

    2014-06-01

    In this work, a propulsion system similar in motion to a sperm-cell is investigated. This system consists of a structure resembling a sperm-cell with a magnetic head and a flexible tail of 42 μm and 280 μm in length, respectively. The thickness, length, and width of this structure are 5.2 μm, 322 μm, and 42 μm, respectively. The magnetic head includes a 200 nm-thick cobalt-nickel layer. The cobalt-nickel layer provides a dipole moment and allows the flexible structure to align along oscillating weak (less than 5 mT) magnetic field lines, and hence generates a propulsion thrust force that overcomes the drag force. The frequency response of this system shows that the propulsion mechanism allows for swimming at an average speed of 158 ± 32 μm/s at alternating weak magnetic field of 45 Hz. In addition, we experimentally demonstrate controlled steering of the flexible structure towards reference positions.

  17. Vortex dynamics in a thin superconducting film with a non-uniform magnetic field applied at its center with a small coil

    DOE PAGES

    Lemberger, Thomas R.; Loh, Yen Lee

    2016-10-27

    This article models the dynamics of vortices that are generated in the middle of a thin, large-area, superconducting film by a low-frequency magnetic field from a small coil, motivated by a desire to better understand measurements of the superconducting coherence length made with a two-coil apparatus. When the applied field exceeds a critical value, vortices and antivortices originate near the middle of the film at the radius where the Lorentz force of the screening supercurrent is largest. The Lorentz force from the screening supercurrent pushes vortices toward the center of the film and antivortices outward. In an experiment, vortices aremore » detected as an increase in mutual inductance between drive coil and a coaxial “pickup” coil on the opposite side of the film. Lastly, the model shows that the essential features of measurements are well described when vortex pinning and the attendant hysteresis are included.« less

  18. UAV formation control design with obstacle avoidance in dynamic three-dimensional environment.

    PubMed

    Chang, Kai; Xia, Yuanqing; Huang, Kaoli

    2016-01-01

    This paper considers the artificial potential field method combined with rotational vectors for a general problem of multi-unmanned aerial vehicle (UAV) systems tracking a moving target in dynamic three-dimensional environment. An attractive potential field is generated between the leader and the target. It drives the leader to track the target based on the relative position of them. The other UAVs in the formation are controlled to follow the leader by the attractive control force. The repulsive force affects among the UAVs to avoid collisions and distribute the UAVs evenly on the spherical surface whose center is the leader-UAV. Specific orders or positions of the UAVs are not required. The trajectories of avoidance obstacle can be obtained through two kinds of potential field with rotation vectors. Every UAV can choose the optimal trajectory to avoid the obstacle and reconfigure the formation after passing the obstacle. Simulations study on UAV are presented to demonstrate the effectiveness of proposed method.

  19. Molecular dynamics simulation of sodium aluminosilicate glass structures and glass surface-water reactions using the reactive force field (ReaxFF)

    NASA Astrophysics Data System (ADS)

    Dongol, R.; Wang, L.; Cormack, A. N.; Sundaram, S. K.

    2018-05-01

    Reactive potentials are increasingly used to study the properties of glasses and glass water reactions in a reactive molecular dynamics (MD) framework. In this study, we have simulated a ternary sodium aluminosilicate glass and investigated the initial stages of the glass surface-water reactions at 300 K using reactive force field (ReaxFF). On comparison of the simulated glass structures generated using ReaxFF and classical Buckingham potentials, our results show that the atomic density profiles calculated for the surface glass structures indicate a bond-angle distribution dependency. The atomic density profiles also show higher concentrations of non-bridging oxygens (NBOs) and sodium ions at the glass surface. Additionally, we present our results of formation of silanol species and the diffusion of water molecules at the glass surface using ReaxFF.

  20. Flow produced by a free-moving floating magnet driven electromagnetically

    NASA Astrophysics Data System (ADS)

    Piedra, Saúl; Román, Joel; Figueroa, Aldo; Cuevas, Sergio

    2018-04-01

    The flow generated by a free-moving magnet floating in a thin electrolyte layer is studied experimentally and numerically. The magnet is dragged by a traveling vortex dipole produced by a Lorentz force created when a uniform dc current injected in the electrolyte interacts with the magnetic field of the same magnet. The problem represents a typical case of fluid-solid interaction but with a localized electromagnetic force promoting the motion. Classical wake flow structures are observed when the applied current varies in the range of 0.2 to 10 A. Velocity fields at the surface of the electrolyte are obtained for different flow conditions through particle image velocimetry. Quasi-two-dimensional numerical simulations, based on the immersed boundary technique that incorporates the fluid-solid interaction, reproduce satisfactorily the dynamics observed in the experiments.

  1. Homogeneous buoyancy-generated turbulence

    NASA Technical Reports Server (NTRS)

    Batchelor, G. K.; Canuto, V. M.; Chasnov, J. R.

    1992-01-01

    Using a theoretical analysis of fundamental equations and a numerical simulation of the flow field, the statistically homogeneous motion that is generated by buoyancy forces after the creation of homogeneous random fluctuations in the density of infinite fluid at an initial instant is examined. It is shown that analytical results together with numerical results provide a comprehensive description of the 'birth, life, and death' of buoyancy-generated turbulence. Results of numerical simulations yielded the mean-square density mean-square velocity fluctuations and the associated spectra as functions of time for various initial conditions, and the time required for the mean-square density fluctuation to fall to a specified small value was estimated.

  2. A Novel Numerical Approach for Generation and Propagation of Rotor-Stator Interaction Noise

    NASA Astrophysics Data System (ADS)

    Patel, Krishna

    As turbofan engine designs move towards bypass ratios ≥12 and corresponding low pressure ratios, fan rotor blade tip Mach numbers are reduced, leading to rotor-stator interaction becoming an important contributor to tonal fan noise. For future aircraft configurations employing boundary layer ingestion, non-uniform flow enters the fan. The impact of such non-uniform flows on the generation and propagation of rotor-stator interaction tones has yet to be assessed. In this thesis, a novel approach is proposed to numerically predict the generation and propagation of rotor-stator interaction noise with distorted inflow. The approach enables a 42% reduction in computational cost compared to traditional approaches employing a sliding interface between the rotor and stator. Such an interface may distort rotor wakes and can cause non-physical acoustic wave reflections if time steps are not sufficiently small. Computational costs are reduced by modelling the rotor using distributed, volumetric body forces. This eliminates the need for a sliding interface and thus allows a larger time step size. The force model responds to local flow conditions and thus can capture the effects of long-wavelength flow distortions. Since interaction noise is generated by the incidence of the rotor wakes onto the stator vanes, the key challenge is to produce the wakes using a body force field since the rotor blades are not directly modelled. It is shown that such an approach can produce wakes by concentrating the viscous forces along streamtubes in the last 15% chord. The new approach to rotor wake generation is assessed on the GE R4 fan from NASA's Source Diagnostic Test, for which the computed overall aerodynamic performance matches the experiment to within 1%. The rotor blade wakes are generated with widths in excellent agreement and depths in fair agreement with the experiment. An assessment of modal sound power levels computed in the exhaust duct indicates that this approach can be used for predicting downstream propagating interaction noise.

  3. Understanding Magnetic Reconnection: The Physical Mechanism Driving Space Weather

    NASA Astrophysics Data System (ADS)

    Black, Carrie; Antiochos, Spiro K.; Karpen, Judith T.; Germaschewski, Kai; Bessho, Naoki

    2015-04-01

    The explosive energy release in solar eruptive events is believed to be due to magnetic reconnection. In the standard model for coronal mass ejections (CME) and/or solar flares, the free energy for the event resides in the strongly sheared magnetic field of a filament channel. The pre-eruption force balance consists of an upward force due to the magnetic pressure of the sheared field countered by the downward tension of the overlying unsheared field. Magnetic reconnection disrupts this force balance. Therefore, to understand CME/flare initiation, it is critical to model the onset of reconnection driven by the build-up of magnetic shear. In MHD simulations, the application of a magnetic-field shear is trivial. However, kinetic effects are important in the diffusion region and thus, it is important to examine this process with PIC simulations as well. The implementation of such a driver in PIC methods is nontrivial, however, and indicates the necessity of a true multiscale model for such processes in the solar environment. The field must be sheared self-consistently and indirectly to prevent the generation of waves that destroy the desired system. In the work presented here, we show reconnection in an X-Point geometry due to a velocity shear driver perpendicular to the plane of reconnection.This material is based upon work supported by the National Science Foundation under Award No. AGS-1331356 and NASA's Living With a Star Targeted Research and Technology program.

  4. ON ESTIMATING FORCE-FREENESS BASED ON OBSERVED MAGNETOGRAMS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhang, X. M.; Zhang, M.; Su, J. T., E-mail: xmzhang@nao.cas.cn

    It is a common practice in the solar physics community to test whether or not measured photospheric or chromospheric vector magnetograms are force-free, using the Maxwell stress as a measure. Some previous studies have suggested that magnetic fields of active regions in the solar chromosphere are close to being force-free whereas there is no consistency among previous studies on whether magnetic fields of active regions in the solar photosphere are force-free or not. Here we use three kinds of representative magnetic fields (analytical force-free solutions, modeled solar-like force-free fields, and observed non-force-free fields) to discuss how measurement issues such asmore » limited field of view (FOV), instrument sensitivity, and measurement error could affect the estimation of force-freeness based on observed magnetograms. Unlike previous studies that focus on discussing the effect of limited FOV or instrument sensitivity, our calculation shows that just measurement error alone can significantly influence the results of estimates of force-freeness, due to the fact that measurement errors in horizontal magnetic fields are usually ten times larger than those in vertical fields. This property of measurement errors, interacting with the particular form of a formula for estimating force-freeness, would result in wrong judgments of the force-freeness: a truly force-free field may be mistakenly estimated as being non-force-free and a truly non-force-free field may be estimated as being force-free. Our analysis calls for caution when interpreting estimates of force-freeness based on measured magnetograms, and also suggests that the true photospheric magnetic field may be further away from being force-free than it currently appears to be.« less

  5. Enhancement of convective heat transfer in internal flows using an electrically-induced corona jet

    NASA Astrophysics Data System (ADS)

    Baghaei Lakeh, Reza

    The enhancement of heat transfer by active and passive methods has been the subject of many academic and industrial research studies. Internal flows play a major role in many applications and different methods have been utilized to augment the heat transfer to internal flows. Secondary flows consume part of the kinetic energy of the flow and disturb the boundary layer. Inducing secondary flows is known as mechanism for heat transfer enhancement. Secondary flows may be generated by corona discharge and ion-driven flows. When a high electric potential is applied to a conductor, a high electric field will be generated. The high electric field may exceed the partial break-down of the neutral molecules of surrounding gas (air) and generate a low-temperature plasma in the vicinity of the conductor. The generated plasma acts as a source of ions that accelerate under the influence of the electric field and escape beyond the plasma region and move toward the grounded electrode. The accelerating ions collide with neutral particles of the surrounding gas and impose a dragging effect which is interpreted as a body-force to the air particles. The shape and configuration of the emitting and receiving electrodes has a significant impact on the distribution of the electric body-force and the resulting electrically-induced flow field. It turned out that the certain configurations of longitudinal electrodes may cause a jet-like secondary flow field on the cross section of the flow passage in internal flows. The impingement effect of the corona jet on the walls of the channel disturbs the boundary layer, enhances the convective heat transfer, and generates targeted cooling along the centerline of the jet. The results of the current study show that the concentric configuration of a suspended wire-electrode in a circular tube leads to a hydrostatic condition and do not develop any electrically-induced secondary flow; however, the eccentric wire-electrode configuration generates a corona jet along the eccentricity direction. The generated corona jet exhibits interesting specifications similar to conventional inertia-driven air jets which are among common techniques for cooling and heat transfer enhancement. On the other hand, wall-mounted flat electrode pairs along the parallel walls of a rectangular mini-channel develop a similar jet-like flow pattern. The impingement of the corona jet to the receiving wall causes excessive heat transfer enhancement and cooling effect. The flat electrode pairs were also utilized to study the effect of corona discharge on the heat transfer specifications of the internal flow between parallel plates in fully-developed condition. It turned out that the electrically-induced secondary flow along with a pressure-driven main flow generates a swirling effect which can enhance the heat transfer significantly in fully-developed condition.

  6. Novel System for Bite-Force Sensing and Monitoring Based on Magnetic Near Field Communication

    PubMed Central

    Lantada, Andres Diaz; Bris, Carlos González; Morgado, Pilar Lafont; Maudes, Jesús Sanz

    2012-01-01

    Intraoral devices for bite-force sensing have several applications in odontology and maxillofacial surgery, as bite-force measurements provide additional information to help understand the characteristics of bruxism disorders and can also be of help for the evaluation of post-surgical evolution and for comparison of alternative treatments. A new system for measuring human bite forces is proposed in this work. This system has future applications for the monitoring of bruxism events and as a complement for its conventional diagnosis. Bruxism is a pathology consisting of grinding or tight clenching of the upper and lower teeth, which leads to several problems such as lesions to the teeth, headaches, orofacial pain and important disorders of the temporomandibular joint. The prototype uses a magnetic field communication scheme similar to low-frequency radio frequency identification (RFID) technology (NFC). The reader generates a low-frequency magnetic field that is used as the information carrier and powers the sensor. The system is notable because it uses an intra-mouth passive sensor and an external interrogator, which remotely records and processes information regarding a patient's dental activity. This permits a quantitative assessment of bite-force, without requiring intra-mouth batteries, and can provide supplementary information to polysomnographic recordings, current most adequate early diagnostic method, so as to initiate corrective actions before irreversible dental wear appears. In addition to describing the system's operational principles and the manufacture of personalized prototypes, this report will also demonstrate the feasibility of the system and results from the first in vitro and in vivo trials. PMID:23112669

  7. Random field assessment of nanoscopic inhomogeneity of bone

    PubMed Central

    Dong, X. Neil; Luo, Qing; Sparkman, Daniel M.; Millwater, Harry R.; Wang, Xiaodu

    2010-01-01

    Bone quality is significantly correlated with the inhomogeneous distribution of material and ultrastructural properties (e.g., modulus and mineralization) of the tissue. Current techniques for quantifying inhomogeneity consist of descriptive statistics such as mean, standard deviation and coefficient of variation. However, these parameters do not describe the spatial variations of bone properties. The objective of this study was to develop a novel statistical method to characterize and quantitatively describe the spatial variation of bone properties at ultrastructural levels. To do so, a random field defined by an exponential covariance function was used to present the spatial uncertainty of elastic modulus by delineating the correlation of the modulus at different locations in bone lamellae. The correlation length, a characteristic parameter of the covariance function, was employed to estimate the fluctuation of the elastic modulus in the random field. Using this approach, two distribution maps of the elastic modulus within bone lamellae were generated using simulation and compared with those obtained experimentally by a combination of atomic force microscopy and nanoindentation techniques. The simulation-generated maps of elastic modulus were in close agreement with the experimental ones, thus validating the random field approach in defining the inhomogeneity of elastic modulus in lamellae of bone. Indeed, generation of such random fields will facilitate multi-scale modeling of bone in more pragmatic details. PMID:20817128

  8. A triangular prism solid and shell interactive mapping element for electromagnetic sheet metal forming process

    NASA Astrophysics Data System (ADS)

    Cui, Xiangyang; Li, She; Feng, Hui; Li, Guangyao

    2017-05-01

    In this paper, a novel triangular prism solid and shell interactive mapping element is proposed to solve the coupled magnetic-mechanical formulation in electromagnetic sheet metal forming process. A linear six-node "Triprism" element is firstly proposed for transient eddy current analysis in electromagnetic field. In present "Triprism" element, shape functions are given explicitly, and a cell-wise gradient smoothing operation is used to obtain the gradient matrices without evaluating derivatives of shape functions. In mechanical field analysis, a shear locking free triangular shell element is employed in internal force computation, and a data mapping method is developed to transfer the Lorentz force on solid into the external forces suffered by shell structure for dynamic elasto-plasticity deformation analysis. Based on the deformed triangular shell structure, a "Triprism" element generation rule is established for updated electromagnetic analysis, which means inter-transformation of meshes between the coupled fields can be performed automatically. In addition, the dynamic moving mesh is adopted for air mesh updating based on the deformation of sheet metal. A benchmark problem is carried out for confirming the accuracy of the proposed "Triprism" element in predicting flux density in electromagnetic field. Solutions of several EMF problems obtained by present work are compared with experiment results and those of traditional method, which are showing excellent performances of present interactive mapping element.

  9. The transition from natural convection to thermomagnetic convection of a magnetic fluid in a non-uniform magnetic field

    NASA Astrophysics Data System (ADS)

    Szabo, Peter S. B.; Früh, Wolf-Gerrit

    2018-02-01

    Magnetic fluid flow and heat transfer by natural and thermomagnetic convection was studied numerically in a square enclosure. The aim was to investigate the transition from natural convection to thermomagnetic convection by exploring situations where buoyancy and the Kelvin body force would be opposing each other such that the magnetic effects would in some cases be the dominant factor throughout the domain and in other cases only in a part of the fluid. The numerical model coupled the solution of the magnetostatic field equation with the heat and fluid flow equations to simulate the fluid flow under a realistic magnetic field generated by a permanent magnet. The results suggest that the domain of influence over the flow field is largely aligned with the domain of dominance of the respective driving force. The result is that the transition from a single buoyancy-driven convection cell to a single thermomagnetically driven cell is via a two-cell structure and that the local effect on the flow field leads to a global effect on the heat transfer with a minimum of the Nusselt number in the transition region.

  10. Pulsed plasma thruster by applied a high current hollow cathode discharge

    NASA Astrophysics Data System (ADS)

    Watanabe, Masayuki; N. Nogera Team; T. Kamada Team

    2013-09-01

    The pulsed plasma thruster applied by a high current hollow cathode discharge has been investigated. In this research, the pseudo-spark discharge (PSD), which is a one of a pulsed high current hollow cathode discharge, is applied to the plasma thruster. In PSD, the opposite surfaces of the anode and cathode have a small circular hole and the cathode has a cylindrical cavity behind the circular hole. To generate the high speed plasma flow, the diameter of the anode hole is enlarged as compared with that of the cathode hole. As a result, the plasma is accelerated by a combination of an electro-magnetic force and a thermo-dynamic force inside a cathode cavity. For the improvement of the plasma jet characteristic, the magnetic field is also applied to the plasma jet. To magnetize the plasma jet, the external magnetic field is directly induced nearby the electrode holes. Consequently, the plasma jet is accelerated with the self-azimuthal magnetic field. With the magnetic field, the temperature and the density of the plasma jet were around 5 eV and in the order of 10 19 m-3. The density increased several times as compared with that without the magnetic field.

  11. Controllability analysis and testing of a novel magnetorheological absorber for field gun recoil mitigation

    NASA Astrophysics Data System (ADS)

    Ouyang, Qing; Zheng, Jiajia; Li, Zhaochun; Hu, Ming; Wang, Jiong

    2016-11-01

    This paper aims to analyze the effects of combined working coils of magnetorheological (MR) absorber on the shock mitigation performance and verify the controllability of MR absorber as applied in the recoil system of a field gun. A physical scale model of the field gun is established and a long-stroke MR recoil absorber with four-stage parallel electromagnetic coils is designed to apply separate current to each stage and generate variable magnetic field distribution in the annular flow channel. Based on dynamic analysis and firing stability conditions of the field gun, ideal recoil force-stroke profiles of MR absorber at different limiting firing angles are obtained. The experimental studies are carried out on an impact test rig under different combinations of current loading: conventional unified control mode, separate control mode and timing control mode. The fullness degree index (FDI) is defined as the quantitative evaluation criterion of the controllability of MR absorber during the whole recoil motion. The results show that the force-stroke profile of the novel MR absorber can approach the ideal curve within 25 degrees of the limiting firing angle through judicious exploitation of the adjustable rheological properties of MR fluid.

  12. Catalytic dimer nanomotors: continuum theory and microscopic dynamics.

    PubMed

    Reigh, Shang Yik; Kapral, Raymond

    2015-04-28

    Synthetic chemically-powered motors with various geometries have potentially new applications involving dynamics on very small scales. Self-generated concentration and fluid flow fields, which depend on geometry, play essential roles in motor dynamics. Sphere-dimer motors, comprising linked catalytic and noncatalytic spheres, display more complex versions of such fields, compared to the often-studied spherical Janus motors. By making use of analytical continuum theory and particle-based simulations we determine the concentration fields, and both the complex structure of the near-field and point-force dipole nature of the far-field behavior of the solvent velocity field that are important for studies of collective motor motion. We derive the dependence of motor velocity on geometric factors such as sphere size and dimer bond length and, thus, show how to construct motors with specific characteristics.

  13. Vesicle biomechanics in a time-varying magnetic field.

    PubMed

    Ye, Hui; Curcuru, Austen

    2015-01-01

    Cells exhibit distortion when exposed to a strong electric field, suggesting that the field imposes control over cellular biomechanics. Closed pure lipid bilayer membranes (vesicles) have been widely used for the experimental and theoretical studies of cellular biomechanics under this electrodeformation. An alternative method used to generate an electric field is by electromagnetic induction with a time-varying magnetic field. References reporting the magnetic control of cellular mechanics have recently emerged. However, theoretical analysis of the cellular mechanics under a time-varying magnetic field is inadequate. We developed an analytical theory to investigate the biomechanics of a modeled vesicle under a time-varying magnetic field. Following previous publications and to simplify the calculation, this model treated the inner and suspending media as lossy dielectrics, the membrane thickness set at zero, and the electric resistance of the membrane assumed to be negligible. This work provided the first analytical solutions for the surface charges, electric field, radial pressure, overall translational forces, and rotational torques introduced on a vesicle by the time-varying magnetic field. Frequency responses of these measures were analyzed, particularly the frequency used clinically by transcranial magnetic stimulation (TMS). The induced surface charges interacted with the electric field to produce a biomechanical impact upon the vesicle. The distribution of the induced surface charges depended on the orientation of the coil and field frequency. The densities of these charges were trivial at low frequency ranges, but significant at high frequency ranges. The direction of the radial force on the vesicle was dependent on the conductivity ratio between the vesicle and the medium. At relatively low frequencies (<200 KHz), including the frequency used in TMS, the computed radial pressure and translational forces on the vesicle were both negligible. This work provides an analytical framework and insight into factors affecting cellular biomechanics under a time-varying magnetic field. Biological effects of clinical TMS are not likely to occur via alteration of the biomechanics of brain cells.

  14. The effect of an external electric field on the growth of incongruent-melting material

    NASA Astrophysics Data System (ADS)

    Uda, Satoshi; Huang, Xinming; Wang, Shou-Qi

    2005-02-01

    The significance of an electric field on the crystallization process is differentiated into two consequences; (i) thermodynamic effect and (ii) growth-dynamic effect. The former modifies the chemical potential of the associated phases which changes the equilibrium phase relationship while the latter influences the solute transport, growth kinetics, surface creation and defect generation during growth. The intrinsic electric field generating during growth is attributed to the crystallization-related electromotive force and the thermoelectric power driven by the temperature gradient at the interface which influences the solute transport and solute partitioning. The external electric field was applied to the growth apparatus in the ternary system of La2O3- Ga2O3- SiO2 so that the chemical potential of both solid and liquid phases changed leading to the variation of the equilibrium phase relationship. Imposing a 500 V/cm electric field on the system moved the boundary of primary phase field of lanthanum gallate ( LaGaO3) and Ga-bearing lanthanum silicate ( La14GaxSi9-xO) toward the SiO2 apex by 5 mol% which clearly demonstrated the change of the phase relationship by the external electric field.

  15. Ground and CHAMP observations of field-aligned current circuits generated by lower atmospheric disturbances and expectations to the SWARM to clarify their three dimensional structure

    NASA Astrophysics Data System (ADS)

    Iyemori, Toshihiko; Nakanishi, Kunihito; Aoyama, Tadashi; Lühr, Hermann

    2014-05-01

    Acoustic gravity waves propagated to the ionosphere cause dynamo currents in the ionosphere. They divert along geomagnetic field lines of force to another hemisphere accompanying electric field and then flow in the ionosphere of another hemisphere by the electric field forming closed current circuits. The oscillating current circuits with the period of acoustic waves generate magnetic variations on the ground, and they are observed as long period geomagnetic pulsations. This effect has been detected during big earthquakes, strong typhoons, tornados etc. On a low-altitude satellite orbit, the spatial distribution (i.e., structure) of the current circuits along the satellite orbit should be detected as temporal magnetic oscillations, and the effect is confirmed by a CHAMP data analysis. On the spatial structure, in particular, in the longitudinal direction, it has been difficult to examine by a single satellite or from ground magnetic observations. The SWARM satellites will provide an unique opportunity to clarify the three dimensional structure of the field-aligned current circuits.

  16. Dielectrophoretic columnar focusing device

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    James, Conrad D; Galambos, Paul C; Derzon, Mark S

    2010-05-11

    A dielectrophoretic columnar focusing device uses interdigitated microelectrodes to provide a spatially non-uniform electric field in a fluid that generates a dipole within particles in the fluid. The electric field causes the particles to either be attracted to or repelled from regions where the electric field gradient is large, depending on whether the particles are more or less polarizable than the fluid. The particles can thereby be forced into well defined stable paths along the interdigitated microelectrodes. The device can be used for flow cytometry, particle control, and other process applications, including cell counting or other types of particle counting,more » and for separations in material control.« less

  17. Emergent spin electromagnetism induced by magnetization textures in the presence of spin-orbit interaction (invited)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tatara, Gen, E-mail: gen.tatara@riken.jp; Nakabayashi, Noriyuki; Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji, Tokyo 192-0397 Japan

    2014-05-07

    Emergent electromagnetic field which couples to electron's spin in ferromagnetic metals is theoretically studied. Rashba spin-orbit interaction induces spin electromagnetic field which is in the linear order in gradient of magnetization texture. The Rashba-induced effective electric and magnetic fields satisfy in the absence of spin relaxation the Maxwell's equations as in the charge-based electromagnetism. When spin relaxation is taken into account besides spin dynamics, a monopole current emerges generating spin motive force via the Faraday's induction law. The monopole is expected to play an important role in spin-charge conversion and in the integration of spintronics into electronics.

  18. Localized Surface Plasmon Resonance of Metal Nanodot Nanowire Arrays Studied by Far-Field and Near-Field Optical

    DTIC Science & Technology

    2007-09-05

    microscope, nanoholes or nanogrooves can be created on the film. After coating a thin Au film by electron beam evaporation and soaking the sample in acetone...SNOM. III. Results and Discussion: (a) LSPR of Au Nanodots With the use of an indentation force of 3.8 μN, a nanohole array was generated on the...images of (a) a nanohole array on PMMA and (b) the corresponding Au nanodot array after lift-off. SEM images of (c) a Au nanodot pattern “NANO” on

  19. STM/STS on proximity-coupled superconducting graphene

    NASA Astrophysics Data System (ADS)

    Ovadia, Maoz; Ji, Yu; Lee, Gil-Ho; Fang, Wenjing; Hoffman, Jennifer; Jarillo-Herrero, Pablo; Kong, Jing; Kim, Philip

    Graphene in good electrical contact with a superconductor has been observed to have an enhanced proximity effect. Application of a magnetic field is expected to generate an Abrikosov lattice of superconducting vortices, each containing Andreev bound states in its core. With our versatile, homebuilt, low temperature scanning tunneling force microscope (STM/SFM), we investigate the electronic properties of graphene on superconducting NbSe2 in a magnetic field and search for signatures of these vortex core states. This work was supported by the STC Center for Integrated Quantum Materials, NSF Grant No. DMR-1231319.

  20. STM/STS on proximity-coupled superconducting graphene

    NASA Astrophysics Data System (ADS)

    Ovadia, Maoz; Ji, Yu; Hoffman, Jennifer; Wang, Joel I.-Jan; Jarillo-Herrero, Pablo

    2015-03-01

    Graphene in good electrical contact with a superconductor has been observed to have an enhanced proximity effect. Application of a magnetic field is expected to generate an Abrikosov lattice of superconducting vortices, each containing Andreev bound states in its core. With our versatile, homebuilt, low temperature scanning tunneling force microscope (STM/SFM), we investigate the electronic properties of graphene on superconducting NbSe2 in a magnetic field and search for signatures of these vortex core states. This work was supported by the STC Center for Integrated Quantum Materials, NSF Grant No. DMR-1231319.

  1. Thermal preparation of an entangled steady state of distant driven spin ensembles

    NASA Astrophysics Data System (ADS)

    Teper, Natalia

    2018-02-01

    Entanglement properties are studied in the continuous-variable system of three nitrogen-vacancy center ensembles cou-pled to separate transmission line resonators interconnected by current-biased Josephson junction. The circuit is enhanced by Josephson parametric amplifier, which serves as source of squeezed microwave field. Bosonic modes of nitrogen-vacancy-center ensembles exhibit steady state entanglement for certain range of parameters. Squeezed microwave field can be consider as a driving force of entanglement. Proposed scheme provides generating entanglement for each of the three pairs of spin ensembles.

  2. Simulation of an Ice Giant-style Dynamo

    NASA Astrophysics Data System (ADS)

    Soderlund, K. M.; Aurnou, J. M.

    2010-12-01

    The Ice Giants, Uranus and Neptune, are unique in the solar system. These planets are the only known bodies to have multipolar magnetic fields where the quadrupole and octopole components have strengths comparable to or greater than that of the dipole. Cloud layer observations show that the planets also have zonal (east-west) flows that are fundamentally different from the banded winds of Jupiter and Saturn. The surface winds are characterized by strong retrograde equatorial jets that are flanked on either side by prograde jets at high latitudes. Thermal emission measurements of Neptune show that the surface energy flux pattern peaks in the equatorial and polar regions with minima at mid-latitudes. (The measurements for Uranus cannot adequately resolve the emission pattern.) The winds and magnetic fields are thought to be the result of convection in the planetary interior, which will also affect the heat flux pattern. Typically, it is implicitly assumed that the zonal winds are generated in a shallow layer, separate from the dynamo generation region. However, if the magnetic fields are driven near the surface, a single region can simultaneously generate both the zonal flows and the magnetic fields. Here, we present a novel numerical model of an Ice Giant-style dynamo to investigate this possibility. An order unity convective Rossby number (ratio of buoyancy to Coriolis forces) has been chosen because retrograde equatorial jets tend to occur in spherical shells when the effects of rotation are relatively weak. Our modeling results qualitatively reproduce all of the structural features of the global dynamical observations. Thus, a self-consistent model can generate magnetic field, zonal flow, and thermal emission patterns that agree with those of Uranus and Neptune. This model, then, leads us to hypothesize that the Ice Giants' zonal flows and magnetic fields are generated via dynamically coupled deep convection processes.

  3. Measurement of Spindle Rigidity by using a Magnet Loader

    NASA Astrophysics Data System (ADS)

    Yamazaki, Taku; Matsubara, Atsushi; Fujita, Tomoya; Muraki, Toshiyuki; Asano, Kohei; Kawashima, Kazuyuki

    The static rigidity of a rotating spindle in the radial direction is investigated in this research. A magnetic loading device (magnet loader) has been developed for the measurement. The magnet loader, which has coils and iron cores, generates the electromagnetic force and attracts a dummy tool attached to the spindle. However, the eddy current is generated in the dummy tool with the spindle rotation and reduces the attractive force at high spindle speed. In order to understand the magnetic flux and eddy current in the dummy tool, the electromagnetic field analysis by FEM was carried out. Grooves on the attraction surface of the dummy tool were designed to cut the eddy current flow. The dimension of the groove were decided based on the FEM analysis, and the designed tool were manufactured and tested. The test result shows that the designed tool successfully reduces the eddy current and recovers the attractive force. By using the magnet loader and the grooved tool, the spindle rigidity can be measured when the spindle rotates with a speed up to 10,000 min-1.

  4. Predictions of wing and pylon forces caused by propeller installation

    NASA Technical Reports Server (NTRS)

    Martinez, Rudolph

    1987-01-01

    Replacement of current turbojets by high-efficiency unducted propfans could have the unfortunate side effect of increasing cabin noise, essentially because unsteady-aerodynamic mechanisms are likely to be introduced whereby some of the energy saved may be lost again, to the production of propeller noise and to wing/pylon vibrations coupling to the cabin as a sounding board. The present study estimates theoretically associated harmonic aerodynamic forces for two candidate configurations: a pusher propeller which chops through the mean wake of the pylon supporting it, and in the process generates a blade-rate force driving the structure, and a tractor wing-mounted propeller, whose trailing rotating wake induces an unsteady downwash field generating unsteady wing airloads. Reported predictions of such propfan aerodynamic sources of structure-borne sound, or vibration, could be the basis for devising means for their mechanical isolation, and thus for the effective interruption of the structural noise path into the cabin. Both mechanisms are analyzed taking advantage of the high subsonic Mach number and high reduced frequency of the interaction between the impinging flow and the affected aerodynamic element.

  5. Design of flat pneumatic artificial muscles

    NASA Astrophysics Data System (ADS)

    Wirekoh, Jackson; Park, Yong-Lae

    2017-03-01

    Pneumatic artificial muscles (PAMs) have gained wide use in the field of robotics due to their ability to generate linear forces and motions with a simple mechanism, while remaining lightweight and compact. However, PAMs are limited by their traditional cylindrical form factors, which must increase radially to improve contraction force generation. Additionally, this form factor results in overly complicated fabrication processes when embedded fibers and sensor elements are required to provide efficient actuation and control of the PAMs while minimizing the bulkiness of the overall robotic system. In order to overcome these limitations, a flat two-dimensional PAM capable of being fabricated using a simple layered manufacturing process was created. Furthermore, a theoretical model was developed using Von Karman’s formulation for large deformations and the energy methods. Experimental characterizations of two different types of PAMs, a single-cell unit and a multi-cell unit, were performed to measure the maximum contraction lengths and forces at input pressures ranging from 0 to 150 kPa. Experimental data were then used to verify the fidelity of the theoretical model.

  6. Laboratory study of low-β forces in arched, line-tied magnetic flux ropes

    NASA Astrophysics Data System (ADS)

    Myers, C. E.; Yamada, M.; Ji, H.; Yoo, J.; Jara-Almonte, J.; Fox, W.

    2016-11-01

    The loss-of-equilibrium is a solar eruption mechanism whereby a sudden breakdown of the magnetohydrodynamic force balance in the Sun's corona ejects a massive burst of particles and energy into the heliosphere. Predicting a loss-of-equilibrium, which has more recently been formulated as the torus instability, relies on a detailed understanding of the various forces that hold the pre-eruption magnetic flux rope in equilibrium. Traditionally, idealized analytical force expressions are used to derive simplified eruption criteria that can be compared to solar observations and modeling. What is missing, however, is a validation that these idealized analytical force expressions can be applied to the line-tied, low-aspect-ratio conditions of the corona. In this paper, we address this shortcoming by using a laboratory experiment to study the forces that act on long-lived, arched, line-tied magnetic flux ropes. Three key force terms are evaluated over a wide range of experimental conditions: (1) the upward hoop force; (2) the downward strapping force; and (3) the downward toroidal field tension force. First, the laboratory force measurements show that, on average, the three aforementioned force terms cancel to produce a balanced line-tied equilibrium. This finding validates the laboratory force measurement techniques developed here, which were recently used to identify a dynamic toroidal field tension force that can prevent flux rope eruptions [Myers et al., Nature 528, 526 (2015)]. The verification of magnetic force balance also confirms the low-β assumption that the plasma thermal pressure is negligible in these experiments. Next, the measured force terms are directly compared to corresponding analytical expressions. While the measured and analytical forces are found to be well correlated, the low-aspect-ratio, line-tied conditions in the experiment are found to both reduce the measured hoop force and increase the measured tension force with respect to analytical expectations. These two co-directed effects combine to generate laboratory flux rope equilibria at lower altitudes than are predicted analytically. Such considerations are expected to modify the loss-of-equilibrium eruption criteria for analogous flux ropes in the solar corona.

  7. Laboratory study of low- β forces in arched, line-tied magnetic flux ropes

    DOE PAGES

    Myers, C. E.; Yamada, M.; Ji, H.; ...

    2016-11-04

    Here, the loss-of-equilibrium is a solar eruption mechanism whereby a sudden breakdown of the magnetohydrodynamic force balance in the Sun's corona ejects a massive burst of particles and energy into the heliosphere. Predicting a loss-of-equilibrium, which has more recently been formulated as the torus instability, relies on a detailed understanding of the various forces that hold the pre-eruption magnetic flux rope in equilibrium. Traditionally, idealized analytical force expressions are used to derive simplified eruption criteria that can be compared to solar observations and modeling. What is missing, however, is a validation that these idealized analytical force expressions can be appliedmore » to the line-tied, low-aspect-ratio conditions of the corona. In this paper, we address this shortcoming by using a laboratory experiment to study the forces that act on long-lived, arched, line-tied magnetic flux ropes. Three key force terms are evaluated over a wide range of experimental conditions: (1) the upward hoop force; (2) the downward strapping force; and (3) the downward toroidal field tension force. First, the laboratory force measurements show that, on average, the three aforementioned force terms cancel to produce a balanced line-tied equilibrium. This finding validates the laboratory force measurement techniques developed here, which were recently used to identify a dynamic toroidal field tension force that can prevent flux rope eruption. The verification of magnetic force balance also confirms the low-beta assumption that the plasma thermal pressure is negligible in these experiments. Next, the measured force terms are directly compared to corresponding analytical expressions. While the measured and analytical forces are found to be well correlated, the low-aspect-ratio, line-tied conditions in the experiment are found to both reduce the measured hoop force and increase the measured tension force with respect to analytical expectations. These two co-directed effects combine to generate laboratory flux rope equilibria at lower altitudes than are predicted analytically. Such considerations are expected to modify the loss-of-equilibrium eruption criteria for analogous flux ropes in the solar corona.« less

  8. Laboratory study of low- β forces in arched, line-tied magnetic flux ropes

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Myers, C. E.; Yamada, M.; Ji, H.

    Here, the loss-of-equilibrium is a solar eruption mechanism whereby a sudden breakdown of the magnetohydrodynamic force balance in the Sun's corona ejects a massive burst of particles and energy into the heliosphere. Predicting a loss-of-equilibrium, which has more recently been formulated as the torus instability, relies on a detailed understanding of the various forces that hold the pre-eruption magnetic flux rope in equilibrium. Traditionally, idealized analytical force expressions are used to derive simplified eruption criteria that can be compared to solar observations and modeling. What is missing, however, is a validation that these idealized analytical force expressions can be appliedmore » to the line-tied, low-aspect-ratio conditions of the corona. In this paper, we address this shortcoming by using a laboratory experiment to study the forces that act on long-lived, arched, line-tied magnetic flux ropes. Three key force terms are evaluated over a wide range of experimental conditions: (1) the upward hoop force; (2) the downward strapping force; and (3) the downward toroidal field tension force. First, the laboratory force measurements show that, on average, the three aforementioned force terms cancel to produce a balanced line-tied equilibrium. This finding validates the laboratory force measurement techniques developed here, which were recently used to identify a dynamic toroidal field tension force that can prevent flux rope eruption. The verification of magnetic force balance also confirms the low-beta assumption that the plasma thermal pressure is negligible in these experiments. Next, the measured force terms are directly compared to corresponding analytical expressions. While the measured and analytical forces are found to be well correlated, the low-aspect-ratio, line-tied conditions in the experiment are found to both reduce the measured hoop force and increase the measured tension force with respect to analytical expectations. These two co-directed effects combine to generate laboratory flux rope equilibria at lower altitudes than are predicted analytically. Such considerations are expected to modify the loss-of-equilibrium eruption criteria for analogous flux ropes in the solar corona.« less

  9. Micro particle launcher/cleaner based on optical trapping technology.

    PubMed

    Liu, Zhihai; Liang, Peibo; Zhang, Yu; Zhang, Yaxun; Zhao, Enming; Yang, Jun; Yuan, Libo

    2015-04-06

    Efficient and controllable launching function of an optical tweezers is a challenging task. We present and demonstrate a novel single fiber optical tweezers which can trap and launch (clean) a target polystyrene (PS) microsphere (diameter~10μm) with independent control by using two wavelengths beams: 980nm and 1480nm. We employ 980nm laser beam to trap the target PS microsphere by molding the fiber tip into a special tapered-shape; and we employ 1480nm laser beam to launch the trapped PS microsphere with a certain velocity by using the thermophoresis force generated from the thermal effect due to the high absorption of the 1480nm laser beams in water. When the launching force is smaller than the trapping force, the PS microsphere will be trapped near the fiber tip, and the launching force will blow away other PS microspheres in the workspace realizing the cleaning function; When the launching force is larger than the trapping force, the trapped PS microsphere will be launched away from the fiber tip with a certain velocity and towards a certain direction, realizing the launching function. The launching velocity, acceleration and the distance can be measured by detecting the interference signals generated from the PS microsphere surface and the fiber tip end-face. This PS microsphere launching and cleaning functions expanded new features of single fiber optical tweezers, providing for the possibility of more practical applications in the micro manipulation research fields.

  10. The ferrosilicon process for the generation of hydrogen

    NASA Technical Reports Server (NTRS)

    Weaver, E R; Berry, W M; Bohnson, V L; Gordon, B D

    1920-01-01

    Report describes the generation of hydrogen by the reaction between ferrosilicon, sodium hydroxide, and water. This method known as the ferrosilicon method is especially adapted for use in the military field because of the relatively small size and low cost of the generator required to produce hydrogen at a rapid rate, the small operating force required, and the fact that no power is used except the small amount required to operate the stirring and pumping machinery. These advantages make it possible to quickly generate sufficient hydrogen to fill a balloon with a generator which can be transported on a motor truck. This report gives a summary of the details of the ferrosilicon process and a critical examination of the means which are necessary in order to make the process successful.

  11. Theoretical analysis of transcranial Hall-effect stimulation based on passive cable model

    NASA Astrophysics Data System (ADS)

    Yuan, Yi; Li, Xiao-Li

    2015-12-01

    Transcranial Hall-effect stimulation (THS) is a new stimulation method in which an ultrasonic wave in a static magnetic field generates an electric field in an area of interest such as in the brain to modulate neuronal activities. However, the biophysical basis of simulating the neurons remains unknown. To address this problem, we perform a theoretical analysis based on a passive cable model to investigate the THS mechanism of neurons. Nerve tissues are conductive; an ultrasonic wave can move ions embedded in the tissue in a static magnetic field to generate an electric field (due to Lorentz force). In this study, a simulation model for an ultrasonically induced electric field in a static magnetic field is derived. Then, based on the passive cable model, the analytical solution for the voltage distribution in a nerve tissue is determined. The simulation results showthat THS can generate a voltage to stimulate neurons. Because the THS method possesses a higher spatial resolution and a deeper penetration depth, it shows promise as a tool for treating or rehabilitating neuropsychiatric disorders. Project supported by the National Natural Science Foundation of China (Grant Nos. 61273063 and 61503321), the China Postdoctoral Science Foundation (Grant No. 2013M540215), the Natural Science Foundation of Hebei Province, China (Grant No. F2014203161), and the Youth Research Program of Yanshan University, China (Grant No. 02000134).

  12. EMAT enhanced dispersion of particles in liquid

    DOEpatents

    Kisner, Roger A.; Rios, Orlando; Melin, Alexander M.; Ludtka, Gerard Michael; Ludtka, Gail Mackiewicz; Wilgen, John B.

    2016-11-29

    Particulate matter is dispersed in a fluid material. A sample including a first material in a fluid state and second material comprising particulate matter are placed into a chamber. The second material is spatially dispersed in the first material utilizing EMAT force. The dispersion process continues until spatial distribution of the second material enables the sample to meet a specified criterion. The chamber and/or the sample is electrically conductive. The EMAT force is generated by placing the chamber coaxially within an induction coil driven by an applied alternating current and placing the chamber and induction coil coaxially within a high field magnetic. The EMAT force is coupled to the sample without physical contact to the sample or to the chamber, by another physical object. Batch and continuous processing are utilized. The chamber may be folded within the bore of the magnet. Acoustic force frequency and/or temperature may be controlled.

  13. Control of flow separation in a turbulent boundary layer

    NASA Astrophysics Data System (ADS)

    Cho, Minjeong; Choi, Sangho; Choi, Haecheon

    2015-11-01

    Towards the development of successful control methods for separation delay in a turbulent boundary layer, we adopt a model flow field, in which a turbulent separation occurs above a flat plate (Na and Moin 1998 JFM), and apply controls to this flow for reducing the size of the separation bubble and investigating the interaction between the forcing and flow near the separation bubble. We provide a single-frequency forcing with zero net mass flow rate at the upstream of the separation bubble. At low forcing frequencies, spanwise vortices are generated and travel downstream, bringing high momentum toward the wall and reducing the size of the separation bubble. Also, these vortices cause the separation and reattachment points to travel downstream. On the other hand, at high forcing frequencies, the size of the separation bubble becomes smaller and larger in time, respectively, due to the pressure gradient alternating favorably and adversely in time. Supported by NRF-2011-0028032 and 2014048162.

  14. Near-field non-radial motion generation from underground chemical explosions in jointed granite

    NASA Astrophysics Data System (ADS)

    Vorobiev, Oleg; Ezzedine, Souheil; Hurley, Ryan

    2018-01-01

    This paper describes analysis of non-radial ground motion generated by chemical explosions in a jointed rock formation during the Source Physics Experiment (SPE). Such motion makes it difficult to discriminate between various subsurface events such as explosions, implosions (i.e. mine collapse) and earthquakes. We apply 3-D numerical simulations to understand experimental data collected during the SPEs. The joints are modelled explicitly as compliant thin inclusions embedded into the rock mass. Mechanical properties of the rock and the joints as well as the joint spacing and orientation are inferred from experimental test data, and geophysical and geological characterization of the SPE site which is dominantly Climax Stock granitic outcrop. The role of various factors characterizing the joints such as joint spacing, frictional properties, orientation and persistence in generation of non-radial motion is addressed. The joints in granite at the SPE site are oriented in nearly orthogonal directions with two vertical sets dipping at 70-80 degrees with the same strike angle, one vertical set almost orthogonal to the first two and one shallow angle joint set dipping 15 degrees. In this study we establish the relationship between the joint orientation and azimuthal variations in the polarity of the observed shear motion. The majority of the shear motion is generated due to the effects of non-elastic sliding on the joints near the source, where the wave can create significant shear stress to overcome the cohesive forces at the joints. Near the surface the joints are less confined and are subject to sliding when the pressure waves are reflected. In the far field, where the cohesive forces on the joints cannot be overcome, additional shear motion can be generated due to elastic anisotropy of the rock mass given by preferred spatial orientations of compliant joints.

  15. Local traction force in the proximal leading process triggers nuclear translocation during neuronal migration.

    PubMed

    Umeshima, Hiroki; Nomura, Ken-Ichi; Yoshikawa, Shuhei; Hörning, Marcel; Tanaka, Motomu; Sakuma, Shinya; Arai, Fumihito; Kaneko, Makoto; Kengaku, Mineko

    2018-04-05

    Somal translocation in long bipolar neurons is regulated by actomyosin contractile forces, yet the precise spatiotemporal sites of force generation are unknown. Here we investigate the force dynamics generated during somal translocation using traction force microscopy. Neurons with a short leading process generated a traction force in the growth cone and counteracting forces in the leading and trailing processes. In contrast, neurons with a long leading process generated a force dipole with opposing traction forces in the proximal leading process during nuclear translocation. Transient accumulation of actin filaments was observed at the dipole center of the two opposing forces, which was abolished by inhibition of myosin II activity. A swelling in the leading process emerged and generated a traction force that pulled the nucleus when nuclear translocation was physically hampered. The traction force in the leading process swelling was uncoupled from somal translocation in neurons expressing a dominant negative mutant of the KASH protein, which disrupts the interaction between cytoskeletal components and the nuclear envelope. Our results suggest that the leading process is the site of generation of actomyosin-dependent traction force in long bipolar neurons, and that the traction force is transmitted to the nucleus via KASH proteins. Copyright © 2018 Elsevier B.V. and Japan Neuroscience Society. All rights reserved.

  16. Remote magnetic actuation using a clinical scale system

    PubMed Central

    Stehning, Christian; Gleich, Bernhard

    2018-01-01

    Remote magnetic manipulation is a powerful technique for controlling devices inside the human body. It enables actuation and locomotion of tethered and untethered objects without the need for a local power supply. In clinical applications, it is used for active steering of catheters in medical interventions such as cardiac ablation for arrhythmia treatment and for steering of camera pills in the gastro-intestinal tract for diagnostic video acquisition. For these applications, specialized clinical-scale field applicators have been developed, which are rather limited in terms of field strength and flexibility of field application. For a general-purpose field applicator, flexible field generation is required at high field strengths as well as high field gradients to enable the generation of both torques and forces on magnetic devices. To date, this requirement has only been met by small-scale experimental systems. We have built a highly versatile clinical-scale field applicator that enables the generation of strong magnetic fields as well as strong field gradients over a large workspace. We demonstrate the capabilities of this coil-based system by remote steering of magnetic drills through gel and tissue samples with high torques on well-defined curved trajectories. We also give initial proof that, when equipped with high frequency transmit-receive coils, the machine is capable of real-time magnetic particle imaging while retaining a clinical-scale bore size. Our findings open the door for image-guided radiation-free remote magnetic control of devices at the clinical scale, which may be useful in minimally invasive diagnostic and therapeutic medical interventions. PMID:29494647

  17. Hydraulic concentration of magnetic fields in the solar photosphere. III - Fields of one or two kilogauss

    NASA Technical Reports Server (NTRS)

    Parker, E. N.

    1976-01-01

    Detailed analysis of weak and strong lines suggests that the magnetic fields in isolated intense flux tubes in supergranule boundaries in the solar photosphere may be as large as 2000 gauss. This paper is a concise systematic review of hydrodynamic effects that might compress a magnetic field to great intensity. The properties of force-free fields are reviewed to show that they do not contribute to concentration of magnetic fields, in spite of the popular notion to the contrary. Of the seven effects considered, it is concluded that only cooling of the gas within the field can produce the high field densities inferred from observation. It is shown that inhibition of convection appears not to possess the necessary qualitative cooling features and that overstability, generating transverse hydromagnetic waves - essentially Alfven waves - is the only way to account for the cooling and field intensification.

  18. A deep dynamo generating Mercury's magnetic field.

    PubMed

    Christensen, Ulrich R

    2006-12-21

    Mercury has a global magnetic field of internal origin and it is thought that a dynamo operating in the fluid part of Mercury's large iron core is the most probable cause. However, the low intensity of Mercury's magnetic field--about 1% the strength of the Earth's field--cannot be reconciled with an Earth-like dynamo. With the common assumption that Coriolis and Lorentz forces balance in planetary dynamos, a field thirty times stronger is expected. Here I present a numerical model of a dynamo driven by thermo-compositional convection associated with inner core solidification. The thermal gradient at the core-mantle boundary is subadiabatic, and hence the outer region of the liquid core is stably stratified with the dynamo operating only at depth, where a strong field is generated. Because of the planet's slow rotation the resulting magnetic field is dominated by small-scale components that fluctuate rapidly with time. The dynamo field diffuses through the stable conducting region, where rapidly varying parts are strongly attenuated by the skin effect, while the slowly varying dipole and quadrupole components pass to some degree. The model explains the observed structure and strength of Mercury's surface magnetic field and makes predictions that are testable with space missions both presently flying and planned.

  19. CHARMM Drude Polarizable Force Field for Aldopentofuranoses and Methyl-aldopentofuranosides

    PubMed Central

    Jana, Madhurima; MacKerell, Alexander D.

    2015-01-01

    An empirical all-atom CHARMM polarizable force filed for aldopentofuranoses and methyl-aldopentofuranosides based on the classical Drude oscillator is presented. A single electrostatic model is developed for eight different diastereoisomers of aldopentofuranoses by optimizing the existing electrostatic and bonded parameters as transferred from ethers, alcohols and hexopyranoses to reproduce quantum mechanical (QM) dipole moments, furanose-water interaction energies and conformational energies. Optimization of selected electrostatic and dihedral parameters was performed to generate a model for methyl-aldopentofuranosides. Accuracy of the model was tested by reproducing experimental data for crystal intramolecular geometries and lattice unit cell parameters, aqueous phase densities, and ring pucker and exocyclic rotamer populations as obtained from NMR experiments. In most cases the model is found to reproduce both QM data and experimental observables in an excellent manner, while for the remainder the level of agreement is in the satisfactory regimen. In aqueous phase simulations the monosaccharides have significantly enhanced dipoles as compared to the gas phase. The final model from this study is transferrable for future studies on carbohydrates and can be used with the existing CHARMM Drude polarizable force field for biomolecules. PMID:26018564

  20. Generation of region 1 current by magnetospheric pressure gradients

    NASA Technical Reports Server (NTRS)

    Yang, Y. S.; Spiro, R. W.; Wolf, R. A.

    1994-01-01

    The Rice Convection Model (RCM) is used to illustrate theoretical possibilities for generating region 1 Birkeland currents by pressure gradients on closed field lines in the Earth's magnetosphere. Inertial effects and viscous forces are neglected. The RCM is applied to idealized cases, to emphasize the basic physical ideas rather than realistic representation of the actual magnetosphere. Ionospheric conductance is taken to be uniform, and the simplest possible representations of the magnetospheric plasma are used. Three basic cases are considered: (1) the case of pure northward Interplanetary Magnetic Field (IMF), with cusp merging assumed to create new closed field lines near the nose of the magnetosphere, following the suggestion by Song and Russell (1992); (2) the case where Dungey-type reconnection occurs at the nose, but magnetosheath plasma somehow enters closed field lines on the dawnside and duskside of the merging region, causing a pressure-driven low-latitude boundary layer; and (3) the case where Dungey-type reconnection occurs at the nose, but region 1 currents flow on sunward drifting plasma sheet field lines. In case 1, currents of region 1 sense are generated by pressure gradients, but those currents do not supply the power for ionospheric convection. Results for case 2 suggest that pressure gradients at the inner edge of the low-latitude boundary layer might generate a large fraction of the region 1 Birkeland currents that drive magnetospheric convection. Results for case 3 indicate that pressure gradients in the plasma sheet could provide part of the region 1 current.

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